BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14740
(362 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
pdb|3SHR|B Chain B, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
Length = 299
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+T Y+ G+YIIRQGARGDTFFIISKGKV VT + + + ++RTL KGD+FGEKALQG+
Sbjct: 182 ETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGE 241
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 128
D+RTAN++AA E V+CLVID+++F LI LD++ K
Sbjct: 242 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNK 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 46/227 (20%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
Y + II++G G +++ GKV+VT E + T+ G FGE A+ + R
Sbjct: 67 YGKDSCIIKEGDVGSLVYVMEDGKVEVT------KEGVKLCTMGPGKVFGELAILYNCTR 120
Query: 94 TANIVAADPEGVSCLVIDQETFNQLI----------------------SSLDEIRTKYVD 131
TA + V ID++ F ++ S +EI +K D
Sbjct: 121 TATVKTL--VNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLAD 178
Query: 132 ETSERRRLNEEF---RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS-- 186
E N E+ + R +I+ G+V + + L+ + K
Sbjct: 179 VLEETHYENGEYIIRQGARGDTFFIISK------GKVNVTREDSPNEDPVFLRTLGKGDW 232
Query: 187 ---QVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 230
+ + +D+RTAN++AA E V+CLVID+++F LI LD++ K
Sbjct: 233 FGEKALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNK 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G ++
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G ++
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 198
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 65 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 159 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 64 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 123
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G ++
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 183
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 71 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 130
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 73 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 133 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GG++++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GG++++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 71 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 130
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 131 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I N F+VKL +FKD LYM++E GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+ KL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+ KL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ +Q +H ++EK I+ N F+ KL +FKD LYM+ME GGE+++ LR G
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFGFAK++ G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ ++ +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+K+ DFG AK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++V+ ++ +H ++EK I+ N F+VKL +FKD LYM+ME GGE+++ LR G
Sbjct: 78 KVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + RFY A +V F+YLHS ++IYRDLKPENL++ GY+++ DFG AK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 57/207 (27%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
L D +++ TLG G FGRV L++ + R +A+K +KK V
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIV------------------- 44
Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
+R K V+ T++ R IV F
Sbjct: 45 -------------------VRLKQVEHTNDERLMLSIV------------------THPF 67
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I++++ TF+D + ++M+M+ GGEL+++LR F + +FY A V A +YLHS++I
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
IYRDLKPEN+LL +G++K+ DFGFAK
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 72 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 131
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 132 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 47 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 106
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 160
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 46 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 105
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 44 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 103
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 45 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 51 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 110
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 111 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 66 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 125
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + GEL +R G+
Sbjct: 66 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 125
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY F+D + LY + GEL +R G+
Sbjct: 74 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS 133
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 134 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + ++ E+++M + F VKLY TF+D + LY + G L +R G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FD+ TRFYTA +V A +YLH + II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++++ E++IM AN ++V+L+ F+D +YLYM+ME GG+L ++ N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 167
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+D + RFYTA VV A D +HS I+RD+KP+N+LL SG++KL DFG K+
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++++ E++IM AN ++V+L+ F+D +YLYM+ME GG+L ++ N
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 162
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+D + RFYTA VV A D +HS I+RD+KP+N+LL SG++KL DFG K+
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++++ E++IM AN ++V+L+ F+D +YLYM+ME GG+L ++ N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 167
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+D + RFYTA VV A D +HS I+RD+KP+N+LL SG++KL DFG K+
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
E++I+ E N FIVKL+ F+ + LY++++ GG+L+T L + F + +FY A +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
A D+LHS IIYRDLKPEN+LL G++KL DFG +K+ I
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 178
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 149 SDLRVITTLGVGGFGRVELV-QIAGDPSRS-FALKQMKKSQVMNLDDLRT 196
S ++ LG G FG+V LV +I+G +R +A+K +KK+ + D +RT
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
E++I+ E N FIVKL+ F+ + LY++++ GG+L+T L + F + +FY A +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
A D+LHS IIYRDLKPEN+LL G++KL DFG +K+ I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 149 SDLRVITTLGVGGFGRVELV-QIAGDPSRS-FALKQMKKSQVMNLDDLRT 196
S ++ LG G FG+V LV +I+G +R +A+K +KK+ + D +RT
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
E++I+ E N FIVKL+ F+ + LY++++ GG+L+T L + F + +FY A +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
A D+LHS IIYRDLKPEN+LL G++KL DFG +K+ I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 149 SDLRVITTLGVGGFGRVELV-QIAGDPSRS-FALKQMKKSQVMNLDDLRT 196
S ++ LG G FG+V LV +I+G +R +A+K +KK+ + D +RT
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ ++++HIMSE+ ++ F+V L+ +F+ LY +++ GGEL+ L+ +
Sbjct: 76 ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC 135
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
F + RFY A + A YLHS NI+YRDLKPEN+LL + G++ L DFG K+ I
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++++ E++IM AN ++V+L+ F+D KYLYM+ME GG+L ++ N
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SN 168
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+D + +FYTA VV A D +HS +I+RD+KP+N+LL G++KL DFG K+
Sbjct: 169 YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 202 ADPEGVSCL-VIDQETFNQ--LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKE 258
ADP L V+ Q +F + L+ + + ++ ++A ++ R + E++
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA--TLKVRDRVRTKMERD 82
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
I+ + N F+VKL+ F+ + LY++++ GG+L+T L + F + +FY A +
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
D+LHS IIYRDLKPEN+LL G++KL DFG +K+ I
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI 181
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRS--FALKQMKKSQVMNLDDLRT 196
S ++ LG G FG+V LV+ P +A+K +KK+ + D +RT
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT 77
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
++A + + H +E+ I+ E FIV L F+ LY+++E GGEL+ L
Sbjct: 54 KKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+G F + T FY A + A +LH + IIYRDLKPEN++L+ G+VKL DFG K+ I
Sbjct: 114 REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
++A + + H +E+ I+ E FIV L F+ LY+++E GGEL+ L
Sbjct: 54 KKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+G F + T FY A + A +LH + IIYRDLKPEN++L+ G+VKL DFG K+ I
Sbjct: 114 REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 189 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 248
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 249 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 303
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 46 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 105
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 106 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 160
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 245
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 47 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 106
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 107 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 161
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 48 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 107
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 108 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 162
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 42 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 101
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 102 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 159
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
M+EK I+ A N F+ +L+ F+ L+ +ME GG+L ++ FD+A RFY
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
A ++ A +LH + IIYRDLK +N+LL G+ KL DFG K+ I
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
R I+ + H ++E ++ F+ L F+ L +ME GGEL+ L
Sbjct: 44 RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 103
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 104 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 161
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
Q M EK+I+ + + FIV L F+ K L ++M GG++ + + D F +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FYTA +V ++LH RNIIYRDLKPEN+LL G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
Q M EK+I+ + + FIV L F+ K L ++M GG++ + + D F +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FYTA +V ++LH RNIIYRDLKPEN+LL G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
Q M EK+I+ + + FIV L F+ K L ++M GG++ + + D F +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FYTA +V ++LH RNIIYRDLKPEN+LL G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
Q M EK+I+ + + FIV L F+ K L ++M GG++ + + D F +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
FYTA +V ++LH RNIIYRDLKPEN+LL G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ VE + +++ E +IM F+V L+ +F+D++ ++M+++ LGG+L L+ +
Sbjct: 52 KCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH 111
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
F + T + + +V A DYL ++ II+RD+KP+N+LL G+V + DF A L PR
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML--PR 167
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 141 EEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTA 197
+E + ++ +G G FG+V +VQ D + +A+K M K + + +++R
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQ-KNDTKKMYAMKYMNKQKCVERNEVRNV 62
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
+ +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ + + RFY
Sbjct: 99 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 158
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 159 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
+ +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ + + RFY
Sbjct: 67 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 126
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 127 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 174
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I+++Y F D+K +Y+++E GEL+ L+ G FD+ +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ + +A Y H R +I+RD+KPENLL+ G +K+ DFG++
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I+++Y F D+K +Y+++E GEL+ L+ G FD+ +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ + +A Y H R +I+RD+KPENLL+ G +K+ DFG++
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I+++Y F D+K +Y+++E GEL+ L+ G FD+ +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ + +A Y H R +I+RD+KPENLL+ G +K+ DFG++
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
+ +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ + + RFY
Sbjct: 52 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 111
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 112 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 159
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
+ +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ + + RFY
Sbjct: 56 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 115
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 116 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
++A + + + +H +E++++ F+V L+ F+ + L+++++ GGEL+T L
Sbjct: 91 KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ F + + Y +V A ++LH IIYRD+K EN+LL ++G+V L DFG +K+ +
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
Query: 358 G 358
Sbjct: 211 A 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
E++++ +C +I L+ F+D+ +LY++M+ +GG+L T+L + + + RFY
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A D +H + ++RD+KP+N+LL +G+++L DFG K+
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 241
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
E++++ +C +I L+ F+D+ +LY++M+ +GG+L T+L + + + RFY
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A D +H + ++RD+KP+N+LL +G+++L DFG K+
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA-TTRFYTAC 314
E++++ + +I +L+ F+D+ YLY++ME +GG+L T+L G A RFY A
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE 170
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A D +H ++RD+KP+N+LL G+++L DFG KL
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E GE++ L+ FD+ T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E GE++ L+ FD+ T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 56/223 (25%)
Query: 133 TSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLD 192
+ +R++ + ++L+D + LG G FG+V L G +A+K +KK V+ D
Sbjct: 3 SEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGT-EELYAIKILKKDVVIQDD 61
Query: 193 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQH 252
D V C ++++ ++++ LD + P
Sbjct: 62 D-------------VECTMVEK----RVLALLD--------------KPP---------- 80
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
F+ +L+ F+ LY +ME GG+L ++ G F + FY
Sbjct: 81 --------------FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
A + +LH R IIYRDLK +N++L + G++K+ DFG K+
Sbjct: 127 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 169
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVE----TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL 281
E K ++ T+ER Q+ E TR++ HI+ +++ G + I+ L +++ ++
Sbjct: 121 EFAVKIMEVTAERLSPEQLEEVREATRRETHIL--RQVAGHPH---IITLIDSYESSSFM 175
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
+++ + GEL+ L +K + TR ++EA +LH+ NI++RDLKPEN+LL
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 342 SGYVKLVDFGFAKKL 356
+ ++L DFGF+ L
Sbjct: 236 NMQIRLSDFGFSCHL 250
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 56/210 (26%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
L++ D + LG G FG+V L + ++ FA+K +KK V+ DD
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDD------------ 61
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
V C ++++ V + +H
Sbjct: 62 -VECTMVEKR-----------------------------VLSLAWEH------------- 78
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
F+ ++ TF+ K+ L+ +ME GG+L ++ FD + FY A ++ +LHS+
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
I+YRDLK +N+LL G++K+ DFG K+
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCKE 168
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 152
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
M EK ++ A F+ ++ TF+ K+ L+ +ME GG+L ++ FD + FY
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
A ++ +LHS+ I+YRDLK +N+LL G++K+ DFG K+
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
++ +C FIV + F L +++ GG+L L G F +A RFY A ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++H+R ++YRDLKP N+LL G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
++ +C FIV + F L +++ GG+L L G F +A RFY A ++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++H+R ++YRDLKP N+LL G+V++ D G A
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
++ +C FIV + F L +++ GG+L L G F +A RFY A ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++H+R ++YRDLKP N+LL G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
++ +C FIV + F L +++ GG+L L G F +A RFY A ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++H+R ++YRDLKP N+LL G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 233 DETSERRRAPQI-----VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
D+ + RA +I V T ++ E ++ + I+KLY F+DK+ Y++ME
Sbjct: 58 DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117
Query: 288 CLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GY 344
GGEL+ + + F++ V+ YLH NI++RDLKPENLLL +
Sbjct: 118 YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL 177
Query: 345 VKLVDFGFA 353
+K+VDFG +
Sbjct: 178 IKIVDFGLS 186
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD---FIVKLYKTFKDKKYLYM 283
I K V + S + A +I+ R + + ++KEI C+ IVKL++ F D+ + ++
Sbjct: 26 ICRKCVHKKSNQAFAVKIISKRMEAN--TQKEITALKLCEGHPNIVKLHEVFHDQLHTFL 83
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
+ME GGEL+ ++ K +F + + +V A ++H +++RDLKPENLL +
Sbjct: 84 VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Query: 344 ---YVKLVDFGFAK 354
+K++DFGFA+
Sbjct: 144 DNLEIKIIDFGFAR 157
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I++LY F D +Y+++E G ++ L+
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T Y + A Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
E++++ + +I L+ F+D LY++M+ +GG+L T+L + + + RFY A
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+V A D +H + ++RD+KP+N+L+ +G+++L DFG KL+
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A Y H + I++RDLK ENLLL +K+ DFGF+ +
Sbjct: 116 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
E EIM + I++LY+TF+D +Y++ME C GGEL+ + K F ++ V
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 316 VEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKL 356
+ A Y H N+ +RDLKPEN L S +KL+DFG A +
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
E EIM + I++LY+TF+D +Y++ME C GGEL+ + K F ++ V
Sbjct: 56 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 316 VEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKL 356
+ A Y H N+ +RDLKPEN L S +KL+DFG A +
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A Y H + I++RDLK ENLLL +K+ DFGF+ +
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
E+ K +D+T + + Q + E IM N IVKL++ + +K LY++M
Sbjct: 41 EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
E GGE++ L G + R +V A Y H + I++RDLK ENLLL +
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
K+ DFGF+ +
Sbjct: 153 KIADFGFSNEF 163
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
E+ K +D+T + + Q + E IM N IVKL++ + +K LY++M
Sbjct: 41 EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
E GGE++ L G + R +V A Y H + I++RDLK ENLLL +
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
K+ DFGF+ +
Sbjct: 153 KIADFGFSNEF 163
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
E+ K +D+T + + Q + E IM N IVKL++ + +K LY++M
Sbjct: 41 EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
E GGE++ L G + R +V A Y H + I++RDLK ENLLL +
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
K+ DFGF+ +
Sbjct: 153 KIADFGFSNEF 163
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ +FG++
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E EI I++LY F D +Y+++E G ++ L+ FD+ T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y + A Y HS+ +I+RD+KPENLLL ++G +K+ +FG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGPRY 361
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+ G +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY 175
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW--TIL 297
+ + T ++ E ++ + + I+KLY+ F+DK+ Y++ME GGEL+ IL
Sbjct: 38 KKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL 97
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
R K F + V+ YLH NI++RDLKPENLLL S +K+VDFG +
Sbjct: 98 RQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A Y H + I++RDLK ENLLL +K+ DFGF+ +
Sbjct: 118 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A Y H + I++RDLK ENLLL +K+ DFGF+ +
Sbjct: 118 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 233 DETSERRRAPQIVE------TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
D+ + RA +I++ T ++ E ++ + + I+KLY+ F+DK+ Y++ME
Sbjct: 42 DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME 101
Query: 287 SCLGGELW--TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---ST 341
GGEL+ ILR K F + V+ YLH NI++RDLKPENLLL S
Sbjct: 102 VYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 159
Query: 342 SGYVKLVDFGFA 353
+K+VDFG +
Sbjct: 160 DALIKIVDFGLS 171
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
E+ K +D+T + + Q + E IM N IVKL++ + +K LY++M
Sbjct: 34 EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 85
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
E GGE++ L G + R +V A Y H + I++RDLK ENLLL +
Sbjct: 86 EYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 145
Query: 346 KLVDFGFAKKL 356
K+ DFGF+ +
Sbjct: 146 KIADFGFSNEF 156
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+V A Y H + I++RDLK ENLLL +K+ DFGF+ +
Sbjct: 119 KFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 58/213 (27%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
++L+D + LG G FG+V L + G +A+K +KK V+ DD
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDD------------ 384
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG-EAN 264
V C M EK ++
Sbjct: 385 -VEC-------------------------------------------TMVEKRVLALPGK 400
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
F+ +L+ F+ LY +ME GG+L ++ G F + FY A + +L S
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ IIYRDLK +N++L + G++K+ DFG K+ I
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I +E ++ + I+KL+ F+DKKY Y++ E GGEL+ + ++ FD+
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
++ YLH NI++RD+KPEN+LL +K+VDFG +
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTR 309
Q + +E +I + I++LY F+D Y+Y+++E C GE+ L+++ F + R
Sbjct: 56 QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR 115
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ ++ YLHS I++RDL NLLL+ + +K+ DFG A +L P
Sbjct: 116 HFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 58/213 (27%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
++L+D + LG G FG+V L + G +A+K +KK V+ DD
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDD------------ 63
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG-EAN 264
V C M EK ++
Sbjct: 64 -VEC-------------------------------------------TMVEKRVLALPGK 79
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
F+ +L+ F+ LY +ME GG+L ++ G F + FY A + +L S
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ IIYRDLK +N++L + G++K+ DFG K+ I
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 211 VIDQETFNQLISSLDEIRTK--YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
V+ + +F ++I D+I + V S+R Q+ + ++ ++ E +++ + + I
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKR----QVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
+KLY+ F+DK Y Y++ E GGEL+ + + F + V+ Y+H I+
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 329 YRDLKPENLLL---STSGYVKLVDFGFA 353
+RDLKPENLLL S ++++DFG +
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 211 VIDQETFNQLISSLDEIRTK--YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
V+ + +F ++I D+I + V S+R Q+ + ++ ++ E +++ + + I
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKR----QVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
+KLY+ F+DK Y Y++ E GGEL+ + + F + V+ Y+H I+
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 329 YRDLKPENLLL---STSGYVKLVDFGFA 353
+RDLKPENLLL S ++++DFG +
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
V+ + +F ++I D+I + +R Q+ + ++ ++ E +++ + + I+K
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKR--QVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
LY+ F+DK Y Y++ E GGEL+ + + F + V+ Y+H I++R
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 331 DLKPENLLL---STSGYVKLVDFGFA 353
DLKPENLLL S ++++DFG +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + ++ ++ E +++ + + I+KLY+ F+DK Y Y++ E GGEL+ + +
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
F + V+ Y+H I++RDLKPENLLL S ++++DFG +
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
+ I +E E++ + I+K+++ F+D +Y++ME+C GGEL + A +
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 311 YTACVVE----AFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAK 354
Y A +++ A Y HS++++++DLKPEN+L S +K++DFG A+
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 219
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD 304
++R Q + E + IV+ +F + ++ + ME GG L +LR K G
Sbjct: 59 DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
Query: 305 D--ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
D T FYT ++E YLH I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD 304
++R Q + E + IV+ +F + ++ + ME GG L +LR K G
Sbjct: 45 DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 104
Query: 305 D--ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
D T FYT ++E YLH I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 105 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 183
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 174
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 173
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 175
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
A +++ET+ ++ + + E EI+ + +IVKL + L++++E C GG + I+
Sbjct: 40 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 99
Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
D+G + + ++EA ++LHS+ II+RDLK N+L++ G ++L DFG + K
Sbjct: 100 LELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
A +++ET+ ++ + + E EI+ + +IVKL + L++++E C GG + I+
Sbjct: 48 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107
Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
D+G + + ++EA ++LHS+ II+RDLK N+L++ G ++L DFG + K
Sbjct: 108 LELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ME GGEL++ ++D+G+ F + +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 168
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
E+ K +D+T + + Q + E I N IVKL++ + +K LY++
Sbjct: 41 EVAVKIIDKTQ--------LNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVX 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
E GGE++ L G + R +V A Y H + I++RDLK ENLLL +
Sbjct: 93 EYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNI 152
Query: 346 KLVDFGFAKKL 356
K+ DFGF+ +
Sbjct: 153 KIADFGFSNEF 163
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + ++ ++ E +++ + + I KLY+ F+DK Y Y++ E GGEL+ + +
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
F + V+ Y H I++RDLKPENLLL S ++++DFG +
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
I +E E + I +LY + ++M++E C GGEL+ + + + TR
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF 114
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+V A Y+HS+ +RDLKPENLL +KL+DFG K G
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD ++ K Y ++ L+++ME GG +LR G FD+
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-AGPFDEFQIATMLK 127
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 170
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFY 311
++EK+I+ + N F+V L ++ K L +++ GG+L + G F +A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
A + + LH I+YRDLKPEN+LL G++++ D G A
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFY 311
++EK+I+ + N F+V L ++ K L +++ GG+L + G F +A FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
A + + LH I+YRDLKPEN+LL G++++ D G A
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFDDATTR 309
M E +++ + + +V L + K KK Y++ E TIL D D +
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQ 127
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
Y ++ + HS NII+RD+KPEN+L+S SG VKL DFGFA+ L P
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 61 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 60 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 61 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 61 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 193 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET----- 247
DL T N+ + D + F +L + + V +T + A +I+ T
Sbjct: 12 DLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + + +A
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
++E+ +++H +I++RDLKPENLLL++ VKL DFG A ++ G
Sbjct: 132 ASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 169
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 170 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 67 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY+ ++M+ME GGEL+ + G D+ +R ++ DY H +
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++RDLKPEN+LL K+ DFG + +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
+ C IV++ +++ +K L ++ E GGEL++ ++D+G+ F + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
EA YLHS NI +RD+KPENLL ++ + +KL DFGFAK+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 126
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 127 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 175
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 111 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 159
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
A+D E ++ V+ Q F Q++ + + + ++Y + R + + T I+SE ++
Sbjct: 5 ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVMLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
N ++V+ Y + K K L++ ME C G L+ ++ + N +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ ++EA Y+HS+ II+RDLKP N+ + S VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 212 IDQETFNQLISSLDEIRTKYVDETSERR--RAPQIVETRQQQHI---MSEKEIMGEANCD 266
++ E F ++I L + Y + E A ++++T+ ++ + M E +I+ +
Sbjct: 8 LNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 67
Query: 267 FIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSR 325
IVKL F + L++L+E C GG + ++ + + ++ + ++A +YLH
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
II+RDLK N+L + G +KL DFG + K
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAK 157
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+V L + F+ K+ L+++ E C L + R + + + T ++A ++ H N
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
I+RD+KPEN+L++ +KL DFGFA+ L GP
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGP 155
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 186 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ +E EI+ + N I+K+ K F D + Y+++E GGEL+ + +AT + Y
Sbjct: 200 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 233 DETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
++ S R+ A ++++ R+QQ + +E IM + +V++YK++ + L++LME
Sbjct: 66 EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
GG L I+ + ++ V++A YLH++ +I+RD+K +++LL+ G VKL D
Sbjct: 126 GGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 350 FGFAKKL 356
FGF ++
Sbjct: 185 FGFCAQI 191
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV LY ++ ++ + ME GG L +++++G + +Y +E +YLHSR I
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 328 IYRDLKPENLLLSTSG-YVKLVDFGFA 353
++ D+K +N+LLS+ G + L DFG A
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV LY ++ ++ + ME GG L +++++G + +Y +E +YLHSR I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 328 IYRDLKPENLLLSTSG-YVKLVDFGFA 353
++ D+K +N+LLS+ G + L DFG A
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI--LRDKGNFDDATT 308
Q I+ E IM + + +VK Y ++ L+++ME C G + I LR+K +D
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ ++ +YLH I+RD+K N+LL+T G+ KL DFG A +L
Sbjct: 129 TILQS-TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD ++ K Y ++ L+++ME GG +L + G D+
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 126
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
A ++++T+ ++ + M E +I+ + IVKL F + L++L+E C GG + ++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ + ++ + ++A +YLH II+RDLK N+L + G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
A ++++T+ ++ + M E +I+ + IVKL F + L++L+E C GG + ++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ + ++ + ++A +YLH II+RDLK N+L + G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
A ++++T+ ++ + M E +I+ + IVKL F + L++L+E C GG + ++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ + ++ + ++A +YLH II+RDLK N+L + G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY+ +M+ME GGEL+ + G ++ R ++ A DY H +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++RDLKPEN+LL K+ DFG + +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY+ +M+ME GGEL+ + G ++ R ++ A DY H +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++RDLKPEN+LL K+ DFG + +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD ++ K Y ++ L+++ME GG +L + G D+
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 131
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 174
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD ++ K Y ++ L+++ME GG +L + G D+
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 111
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD ++ K Y ++ L+++ME GG +L + G D+
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 111
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
QI + + + E EI + I++LY F D++ +Y+++E GEL+ L+
Sbjct: 60 QIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT 119
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
FD+ T + +A Y H + +I+RD+KPENLLL G +K+ DFG++
Sbjct: 120 FDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L++ +
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 117
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V+ YL ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 118 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 166
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
+++ G N I++L T++ + +++ + GEL+ L +K + TR ++
Sbjct: 78 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
E LH NI++RDLKPEN+LL +KL DFGF+ +L
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
+++ G N I++L T++ + +++ + GEL+ L +K + TR ++
Sbjct: 78 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
E LH NI++RDLKPEN+LL +KL DFGF+ +L
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E I+ L+ F++K + +++E
Sbjct: 32 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 91
Query: 290 GGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGY 344
GGEL+ L +K + +D T+F +++ YLHS+ I + DLKPEN++L +
Sbjct: 92 GGELFDFLAEKESLTEDEATQFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 150
Query: 345 VKLVDFGFAKKL 356
+KL+DFG A K+
Sbjct: 151 IKLIDFGIAHKI 162
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E I+ L+ F++K + +++E
Sbjct: 39 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 98
Query: 290 GGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGY 344
GGEL+ L +K + +D T+F +++ YLHS+ I + DLKPEN++L +
Sbjct: 99 GGELFDFLAEKESLTEDEATQFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 157
Query: 345 VKLVDFGFAKKL 356
+KL+DFG A K+
Sbjct: 158 IKLIDFGIAHKI 169
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF-DDATT 308
++ I E I+ E I+ L+ F++K + +++E GGEL+ L +K + +D T
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKL 356
+F +++ YLHS+ I + DLKPEN++L + +KL+DFG A K+
Sbjct: 133 QFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
+++ G N I++L T++ + +++ + GEL+ L +K + TR ++
Sbjct: 65 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
E LH NI++RDLKPEN+LL +KL DFGF+ +L
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
A+D E ++ V+ Q F Q++ + + + ++Y + R + + T I+SE ++
Sbjct: 5 ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVMLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
N ++V+ Y + K K L++ ME C L+ ++ + N +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ ++EA Y+HS+ II+RDLKP N+ + S VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V +T+ A +I+ T R Q + E I + IV+L+ + +++ + Y++ +
Sbjct: 49 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
GGEL+ + + + +A ++E+ Y HS I++R+LKPENLLL++
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 344 YVKLVDFGFA 353
VKL DFG A
Sbjct: 169 AVKLADFGLA 178
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
G+ C+ ++ T Q + K +D ++RR + + +E IM + +
Sbjct: 59 GIVCIATEKHTGKQ-------VAVKKMDLRKQQRR----------ELLFNEVVIMRDYHH 101
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC--VVEAFDYLH 323
D +V +Y ++ L+++ME GG L I+ ++ + T C V+ A YLH
Sbjct: 102 DNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIATVCLSVLRALSYLH 158
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ +I+RD+K +++LL++ G +KL DFGF ++
Sbjct: 159 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 191
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V +T+ A +I+ T R Q + E I + IV+L+ + +++ + Y++ +
Sbjct: 26 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
GGEL+ + + + +A ++E+ Y HS I++R+LKPENLLL++
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 344 YVKLVDFGFA 353
VKL DFG A
Sbjct: 146 AVKLADFGLA 155
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V +T+ A +I+ T R Q + E I + IV+L+ + +++ + Y++ +
Sbjct: 25 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 84
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
GGEL+ + + + +A ++E+ Y HS I++R+LKPENLLL++
Sbjct: 85 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 344 YVKLVDFGFA 353
VKL DFG A
Sbjct: 145 AVKLADFGLA 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V +T+ A +I+ T R Q + E I + IV+L+ + +++ + Y++ +
Sbjct: 26 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
GGEL+ + + + +A ++E+ Y HS I++R+LKPENLLL++
Sbjct: 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 344 YVKLVDFGFA 353
VKL DFG A
Sbjct: 146 AVKLADFGLA 155
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 241 APQIVETR---QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWT-I 296
A +I++TR ++ + +E +M + + +++LY F+ K + ++ME GGEL+ I
Sbjct: 118 AAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI 177
Query: 297 LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAK 354
+ + N + T + + E ++H I++ DLKPEN+L + +K++DFG A+
Sbjct: 178 IDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
Query: 355 K 355
+
Sbjct: 238 R 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
I+ L + D K++Y++ E GGEL ILR K F + F + + +YLHS+
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
+++RDLKP N+L + SG +++ DFGFAK+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKGNFDDATT 308
+ + E I+ + + +VKL + D +LYM+ E G + + K +D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-QA 139
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
RFY +++ +YLH + II+RD+KP NLL+ G++K+ DFG + + G
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 124 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 157
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 123 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 156
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
+ + D I++LY +Y+YM+ME C +L + L+ K + D + Y ++EA
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 127 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 160
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KL + F+ + +++E GGEL+ + +KG + + ++EA YLH I
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 328 IYRDLKPENLLLSTS---GYVKLVDFGFAK 354
++RDLKPENLL +T +K+ DFG +K
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSK 199
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
I+ L + D K++Y++ E GGEL ILR K F + F + + +YLHS+
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
+++RDLKP N+L + SG +++ DFGFAK+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|E Chain E, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 23 LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK-----YIRTLY 77
L +V Y +G+ II QG D+FFI+ G+VK+TMK+ +E + I +
Sbjct: 284 LKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCF 343
Query: 78 KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
+G +FGE AL + R A+ A V CL +D + F +L+ EI + +
Sbjct: 344 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 394
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 51/239 (21%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 227
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
+ A I A P + L D+ TF ++I V +++R++ E F
Sbjct: 228 TPKAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 275
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
+SL +S+ L+V+ +G + E + GD + SF +K+ KS+V
Sbjct: 276 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENG 335
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
+ A +V P S CL +D + F +L+ EI + +
Sbjct: 336 AVEIARCFRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 394
>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 23 LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK-----YIRTLY 77
L +V Y +G+ II QG D+FFI+ G+VK+TMK+ +E + I +
Sbjct: 284 LKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCF 343
Query: 78 KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
+G +FGE AL + R A+ A V CL +D + F +L+ EI + +
Sbjct: 344 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 394
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 51/239 (21%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 227
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
+ A I A P + L D+ TF ++I V +++R++ E F
Sbjct: 228 TPKAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 275
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
+SL +S+ L+V+ +G + E + GD + SF +K+ KS+V
Sbjct: 276 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENG 335
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
+ A +V P S CL +D + F +L+ EI + +
Sbjct: 336 AVEIARCFRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 394
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN----FDDATTRFYTACVVEAFDYLH 323
IV+L +T+ LYM+ E G +L + + + + +A Y ++EA Y H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
NII+RD+KPEN+LL++ S VKL DFG A +L
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL 183
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ +Q + + G + I+ +Y+ K+ L ++ME GGEL++ ++++G D A
Sbjct: 67 KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG--DQA 124
Query: 307 TTRFYTACVVE----AFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKK 355
T A ++ A +LHS NI +RD+KPENLL ++ +KL DFGFAK+
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV LY ++ ++ + ME GG L +++ G + +Y +E +YLH+R I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
++ D+K +N+LLS+ G L DFG A
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY K K + M++E G EL+ + + + R + ++ A +Y H I
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
++RDLKPENLLL VK+ DFG +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
I+ E E++ + + I+KL++ +D Y++ E GGEL+ + + F +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
V Y+H NI++RDLKPEN+LL + +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY K K + M++E G EL+ + + + R + ++ A +Y H I
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
++RDLKPENLLL VK+ DFG +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY K K + M++E G EL+ + + + R + ++ A +Y H I
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
++RDLKPENLLL VK+ DFG +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV LY ++ ++ + ME GG L +++ G + +Y +E +YLH+R I
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
++ D+K +N+LLS+ G L DFG A
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ +Q + + G + I+ +Y+ K+ L ++ME GGEL++ ++++G D A
Sbjct: 48 KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG--DQA 105
Query: 307 TTRFYTACVVE----AFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKK 355
T A ++ A +LHS NI +RD+KPENLL ++ +KL DFGFAK+
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 161
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I+KLY K K + M++E G EL+ + + + R + ++ A +Y H I
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
++RDLKPENLLL VK+ DFG +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + +
Sbjct: 42 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG 358
+A ++E+ ++ H I++RDLKPENLLL S VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV LY ++ ++ + ME GG L +++ G + +Y +E +YLH+R I
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
++ D+K +N+LLS+ G L DFG A
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + +
Sbjct: 42 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG 358
+A ++E+ ++ H I++RDLKPENLLL S VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 25 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 85 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 143
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 144 ISDFGLA 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 26 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 86 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 145 ISDFGLA 151
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
A+D E ++ V+ Q F Q++ + + + ++Y + R + + T I+SE ++
Sbjct: 5 ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVXLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
N ++V+ Y + K K L++ E C L+ ++ + N +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ ++EA Y+HS+ II+R+LKP N+ + S VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
V+ +E A +IV+ ++ ++I E I N + +VK Y ++ Y+ +E
Sbjct: 27 VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
C GGEL+ I D G + RF+ ++ YLH I +RD+KPENLLL +K
Sbjct: 87 CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
+ DFG A
Sbjct: 146 ISDFGLA 152
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
++EI + CD +I + + ++ L+++ME GG +L+ G ++
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILR 123
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 166
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
I+ E E++ + + I+KL++ +D Y++ E GGEL+ + + F +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
V Y+H NI++RDLKPEN+LL + +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y HS I
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAKKLI 357
+RDLK EN LL S + +K+ DFG++K +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
GV+ L+ D+++ N+L++ R + +DE +R +I+ R +H
Sbjct: 32 GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 73
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y H+
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
+ +RDLK EN LL S + +K+ DFG++K
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 248 RQQQHIMSEKEI--MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
+ H+ E+EI + I+KLY + M++E GGEL+ + +K +
Sbjct: 49 KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE 107
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
R + ++ A +Y H I++RDLKPENLLL + VK+ DFG +
Sbjct: 108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
GV+ L+ D++ N+L++ R + +DE +R +I+ R +H
Sbjct: 33 GVARLMRDKQA-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y H+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
+ +RDLK EN LL S + +K+ DFG++K
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
I+ E E++ + + I+KL++ +D Y++ E GGEL+ + + F +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
V Y+H NI++RDLKPEN+LL + +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + +
Sbjct: 60 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 119
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
+A ++EA + H +++RDLKPENLLL++ VKL DFG A ++ G
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
I+ L + D KY+Y++ E GGEL ILR K F + + + +YLH++
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQG 136
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
+++RDLKP N+L + SG +++ DFGFAK+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
I+ L + D KY+Y++ E GGEL ILR K F + + + +YLH++
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQG 136
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
+++RDLKP N+L + SG +++ DFGFAK+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + +
Sbjct: 42 LSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
+A ++EA + H +++RDLKPENLLL++ VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 158
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWT-ILRDKGNFDDATTRFY 311
+ +E IM + + ++ L+ F+DK + +++E GGEL+ I + +A Y
Sbjct: 95 VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 154
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
E ++H +I++ D+KPEN++ T + VK++DFG A KL
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + I+ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + ++ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + ++ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 276 KDKKYLYMLMESCLGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLK 333
++K+ +YM+ME C+ G E+ + +K F Y +++ +YLHS+ I+++D+K
Sbjct: 78 EEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIK 136
Query: 334 PENLLLSTSGYVKLVDFGFAKKL 356
P NLLL+T G +K+ G A+ L
Sbjct: 137 PGNLLLTTGGTLKISALGVAEAL 159
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 23 LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNST------EEKYIRTL 76
+ IV + YK+G+ II QG + D+F+II G+V + ++ + +E I
Sbjct: 177 MKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHC 236
Query: 77 YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
+KG +FGE AL + R A+ V CLV+D + F +L+ +I + + E+
Sbjct: 237 HKGQYFGELALVTNKPRAASAYGVGD--VKCLVMDVQAFERLLGPCMDIMKRNISHYEEQ 294
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD---FFGEKAL 87
+ K +++I QG GD F++I +G + + + N T R++ + D FGE AL
Sbjct: 63 EKIVKTDEHVIDQGDDGDNFYVIERGTYDILVTKDNQT-----RSVGQYDNRGSFGELAL 117
Query: 88 QGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLR 147
+ R A I+A EG S +D+ TF ++I + + K + E L F+SL
Sbjct: 118 MYNTPRAATIIAT-SEG-SLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPL---FKSLE 172
Query: 148 LSD-LRVITTLGVGGFGRVELVQIAGDPSRSF---------------------------A 179
+S+ ++++ +G + E + G+ + SF
Sbjct: 173 MSERMKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVE 232
Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVS---CLVIDQETFNQLISSLDEIRTKYVDETS 236
+ K Q L T AA GV CLV+D + F +L+ +I + +
Sbjct: 233 IAHCHKGQYFGELALVTNKPRAASAYGVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYE 292
Query: 237 ER 238
E+
Sbjct: 293 EQ 294
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + ++ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + ++ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 37 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 157 KIIDFGLAHKI 167
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 37 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 157 KIIDFGLAHKI 167
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+++ I++E +M E IV ++ L+++ME GG L ++ + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
C+ +A ++LHS +I+RD+K +N+LL G VKL DFGF ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+++ I++E +M E IV ++ L+++ME GG L ++ + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
C+ +A ++LHS +I+RD+K +N+LL G VKL DFGF ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+++ I++E +M E IV ++ L+++ME GG L ++ + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
C+ +A ++LHS +I+RD+K +N+LL G VKL DFGF ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
++ I E I+ + ++ L+ ++++ + +++E GGEL+ L K + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
+ +++ +YLH++ I + DLKPEN++L ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 220 LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK 279
L+ S ++ R + E + R + +++++ E ++ IV+ ++F++
Sbjct: 42 LVKSTEDGRQYVIKEINISR-----MSSKEREESRREVAVLANMKHPNIVQYRESFEENG 96
Query: 280 YLYMLMESCLGGELWT-ILRDKGNF---DDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
LY++M+ C GG+L+ I KG D F C+ A ++H R I++RD+K +
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL--ALKHVHDRKILHRDIKSQ 154
Query: 336 NLLLSTSGYVKLVDFGFAKKL 356
N+ L+ G V+L DFG A+ L
Sbjct: 155 NIFLTKDGTVQLGDFGIARVL 175
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + +++E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
+++P ++ + I K+I E IV L ++ + Y++M+ GGEL+ +
Sbjct: 43 KKSPAFRDSSLENEIAVLKKIKHEN----IVTLEDIYESTTHYYLVMQLVSGGELFDRIL 98
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAK 354
++G + + V+ A YLH I++RDLKPENLL T + + + DFG +K
Sbjct: 99 ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+++ I++E +M E IV ++ L+++ME GG L ++ + +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 120
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
C+ +A ++LHS +I+RD+K +N+LL G VKL DFGF ++
Sbjct: 121 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 167
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + +E I + +V + F+D ++Y+++E C L + + +
Sbjct: 80 LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R++ ++ YLH+ +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + +E I + +V + F+D ++Y+++E C L + + +
Sbjct: 80 LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R++ ++ YLH+ +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
+ E I+ E IVKLY KK L ++ E L +L +L +G + T + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ Y H R +++RDLKP+NLL++ G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
+ E I+ E IVKLY KK L ++ E L +L +L +G + T + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ Y H R +++RDLKP+NLL++ G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + +E I + +V + F+D ++Y+++E C L + + +
Sbjct: 80 LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R++ ++ YLH+ +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + +E I + +V + F+D ++Y+++E C L + + +
Sbjct: 64 LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 123
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R++ ++ YLH+ +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
+ E I+ E IVKLY KK L ++ E L +L +L +G + T + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ Y H R +++RDLKP+NLL++ G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
QQ+ E +I+ + DFIVK Y+ ++ L ++ME G L L R + D
Sbjct: 54 QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 112
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y++ + + +YL SR ++RDL N+L+ + +VK+ DFG AK L
Sbjct: 113 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
QQ+ E +I+ + DFIVK Y+ ++ L ++ME G L L R + D
Sbjct: 67 QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 125
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y++ + + +YL SR ++RDL N+L+ + +VK+ DFG AK L
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
QQ+ E +I+ + DFIVK Y+ ++ L ++ME G L L R + D
Sbjct: 55 QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 113
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y++ + + +YL SR ++RDL N+L+ + +VK+ DFG AK L
Sbjct: 114 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
QQ+ E +I+ + DFIVK Y+ + L ++ME G L L R + D
Sbjct: 51 QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLD 109
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y++ + + +YL SR ++RDL N+L+ + +VK+ DFG AK L
Sbjct: 110 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D +F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKDFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKPENLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 156
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEH--------VHQDLKTFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I IV+L+ + ++ + Y++ + GGEL+ + + +
Sbjct: 49 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
+A ++EA + H +++R+LKPENLLL++ VKL DFG A ++ G
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAK 354
+RDLK EN LL S + +K+ DFG++K
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKPENLL++T G +KL DFG A+ P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 158
>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta
Regulatory Subunit Of Camp-Dependent Protein Kinase
Length = 305
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 23 LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNST--EEK---YIRTLY 77
L +V Y +G+ II QG D+FFI+ G+V++TMK+ + EE I
Sbjct: 173 LKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCL 232
Query: 78 KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
+G +FGE AL + R A+ A V CL +D + F +L+ EI + +
Sbjct: 233 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 283
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 59 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 116
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
R A I A P + L D+ TF ++I V +++R++ E F
Sbjct: 117 TPRAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 164
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
+SL +S+ L+V+ +G + E + GD + SF +K+ KS +
Sbjct: 165 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENG 224
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
+ A +V P S CL +D + F +L+ EI + +
Sbjct: 225 AVEIARCLRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 184 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 242
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 243 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKPENLL++T G +KL DFG A+ P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 107 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 165
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 166 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
P+ ++ I +E ++ + + IV L ++ +LY++M+ GGEL+ + +KG
Sbjct: 56 PKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG 115
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAK 354
+ + V++A YLH I++RDLKPENLL + + + DFG +K
Sbjct: 116 FYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 64 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 122
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 123 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 55/173 (31%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
K +++ R+ P+ VE I +E +M + + I +LY+ ++D++Y+ ++ME C
Sbjct: 57 KIMNKNKIRQINPKDVE-----RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCH 111
Query: 290 GGELWTILRDKGN--FDDATTRF--------YTAC------------------------- 314
GG L DK N DD+T + C
Sbjct: 112 GGHLL----DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167
Query: 315 ---------VVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
+ A YLH++ I +RD+KPEN L ST S +KLVDFG +K+
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV L ++ +LY++M+ GGEL+ + +KG + + V++A YLH I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
++RDLKPENLL L + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV L ++ +LY++M+ GGEL+ + +KG + + V++A YLH I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
++RDLKPENLL L + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 62 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 120
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 121 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV L ++ +LY++M+ GGEL+ + +KG + + V++A YLH I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
++RDLKPENLL L + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV L ++ +LY++M+ GGEL+ + +KG + + V++A YLH I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
++RDLKPENLL L + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 53 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 111
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 112 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI----LRDKGNFDDATTRFYTACVVEAF 319
+C ++ L++ +++ + +++E GGE++++ L + + +D ++E
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ--ILEGV 144
Query: 320 DYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
YLH NI++ DLKP+N+LLS+ G +K+VDFG ++K+
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV+L+ K L ++ E C G+ D + + +++ + HSRN+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
++RDLKP+NLL++ +G +KL DFG A+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
++ R+QQ + +E IM + + +V++Y ++ L+++ME GG L I+
Sbjct: 57 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 115
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ V++A LH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 116 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 170
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+++ I++E +M E IV ++ L+++ME GG L ++ + +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 120
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
C+ +A ++LHS +I+R++K +N+LL G VKL DFGF ++
Sbjct: 121 AVCRECL-QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI 167
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 257 KEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRD--------KGNFDDA 306
KEI + C IV Y +F K L+++M+ GG + I++ G D++
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
T V+E +YLH I+RD+K N+LL G V++ DFG +
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEH--------VDQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 257 KEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRD--------KGNFDDA 306
KEI + C IV Y +F K L+++M+ GG + I++ G D++
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
T V+E +YLH I+RD+K N+LL G V++ DFG +
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
+Y + ++RR ++ I E I+ E ++ L++ +++K + ++ E
Sbjct: 38 QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
GGEL+ L +K + + + ++ YLHS I + DLKPEN++L +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
GV+ L+ D+++ N+L++ R + +DE +R +I+ R +H
Sbjct: 33 GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y H+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
+ +RDLK EN LL S + +K+ FG++K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
GV+ L+ D+++ N+L++ R + +DE +R +I+ R +H
Sbjct: 33 GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y H+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
+ +RDLK EN LL S + +K+ FG++K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKTFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + D F DA+
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKPENLL++T G +KL DFG A+ P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + D F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKPENLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 159
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 105
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 105
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 108
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+L+S + VK+VDFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI 166
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 108
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + +D F DA+
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + D +F DA+
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKDFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 381
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 23 LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF 82
LT+ +++G+ I+ QG GD F+II++G V ++ + E + L D+F
Sbjct: 265 LTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324
Query: 83 GEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
GE AL + R A +VA P + C+ +D+ F +++ EI
Sbjct: 325 GEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEI 365
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 54/225 (24%)
Query: 37 GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTAN 96
G+ +I+QG GD F+++ +G+V V + +++ + +G FGE AL R A
Sbjct: 161 GETVIQQGNEGDNFYVVDQGEVDVYVNG------EWVTNISEGGSFGELALIYGTPRAAT 214
Query: 97 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSL--------RL 148
+ A + ID++++ +++ + T +R++ EEF S +
Sbjct: 215 VKAKT--DLKLWGIDRDSYRRIL----------MGSTLRKRKMYEEFLSKVSILESLEKW 262
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMN------------------ 190
L V L F E + + G+P F + + V+
Sbjct: 263 ERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSD 322
Query: 191 --------LDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 227
L+ R A +VA P + C+ +D+ F +++ EI
Sbjct: 323 YFGEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEI 365
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
+ E ++ E N IVKL + LY++ E + D +F DA+
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKDFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ Y +++ + HS +++RDLKP+NLL++T G +KL DFG A+ P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYT 312
+ E +++ E + I+ L F K + ++ + + +L I++D + + Y
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
++ +YLH I++RDLKP NLLL +G +KL DFG AK P
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 79 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 138
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 77 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 136
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 137 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 59 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 118
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 119 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 181
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV+L+ K L ++ E C G+ D + + +++ + HSRN+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
++RDLKP+NLL++ +G +KL +FG A+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
+++ME CLG + K + T ++ YLHS N+I+RD+K N+LLS
Sbjct: 130 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 189
Query: 342 SGYVKLVDFGFA 353
G VKL DFG A
Sbjct: 190 PGLVKLGDFGSA 201
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 55 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 114
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ D+LHS +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
+++ME CLG + K + T ++ YLHS N+I+RD+K N+LLS
Sbjct: 91 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 150
Query: 342 SGYVKLVDFGFA 353
G VKL DFG A
Sbjct: 151 PGLVKLGDFGSA 162
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 55 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 114
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 53 LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 112
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ D+LHS +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ D+LHS +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD---- 299
+++ + + + E +++ + N ++K Y +F + L +++E G+L +++
Sbjct: 70 LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 129
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
K + T Y + A +++HSR +++RD+KP N+ ++ +G VKL D G +
Sbjct: 130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTACVVEAFDYLHS 324
+V L+ F+D + M+ E GGEL+ + D+ N D+A Y V + ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 167
Query: 325 RNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
N ++ DLKPEN++ +T S +KL+DFG L
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 201
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTACVVEAFDYLHS 324
+V L+ F+D + M+ E GGEL+ + D+ N D+A Y V + ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 273
Query: 325 RNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
N ++ DLKPEN++ +T S +KL+DFG L
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
+T +V + RR+ E ++ +M ++ +C +IV+ + TF +++ ME
Sbjct: 48 KTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME- 104
Query: 288 CLGGELWTIL--RDKGNFDDATTRFYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGY 344
L G L R +G + T +V+A YL ++ +I+RD+KP N+LL G
Sbjct: 105 -LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ 163
Query: 345 VKLVDFGFAKKLI 357
+KL DFG + +L+
Sbjct: 164 IKLCDFGISGRLV 176
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+++S + VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 46/218 (21%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
++D R+I TL G F ++ L + ++ +ALK+ +KS + D +N
Sbjct: 30 INDYRIIRTLNQGKFNKIILCE---KDNKFYALKKYEKSLLEKKRDFTKSN--------- 77
Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
N IS I++KY D +E QI+ + ++ ++ + I+ + +
Sbjct: 78 ----------NDKIS----IKSKYDDFKNEL----QIITDIKNEYCLTCEGIITNYDEVY 119
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA----FDYLH 323
I+ Y YM +S L + + + DK N+ C++++ F Y+H
Sbjct: 120 II----------YEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIH 168
Query: 324 S-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ +NI +RD+KP N+L+ +G VKL DFG ++ ++ +
Sbjct: 169 NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+++S + VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+++S + VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+++S + VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I++L + F+D Y++ E GG + ++ + +F++ V A D+LH++ I
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGI 132
Query: 328 IYRDLKPENLLLSTS---GYVKLVDF 350
+RDLKPEN+L + VK+ DF
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDF 158
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
N IV +Y T + + Y++ME G L I+ +G A +A
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ H II+RD+KP N+++S + VK++DFG A+ +
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGEL-WTILR--DKG-NFDDATTRFYTACVVEAFDYLH 323
IV+L +T+ LYM+ E G +L + I++ D G + +A Y ++EA Y H
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
NII+RD+KP +LL++ S VKL FG A +L
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D+LH+ I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D+LH+ I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D+LH+ I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D+LH+ I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGEL-WTILR--DKG-NFDDATTRFYTACVVEAFDYLH 323
IV+L +T+ LYM+ E G +L + I++ D G + +A Y ++EA Y H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
NII+RD+KP +LL++ S VKL FG A +L
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 281 LYMLMESCLGGELWTILRD-KGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
L+++ME C G + ++++ KGN + + ++ +LH +I+RD+K +N+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 339 LSTSGYVKLVDFGFAKKL 356
L+ + VKLVDFG + +L
Sbjct: 162 LTENAEVKLVDFGVSAQL 179
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV + ++ Y++ME G L + G T +T +++ + H I
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++RD+KP+N+L+ ++ +K+ DFG AK L
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RL3|B Chain B, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RGS|A Chain A, Regulatory Subunit Of Camp Dependent Protein Kinase
Length = 288
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+++G I+ QG GD FFII +G V ++ + E + L D+FGE AL + R
Sbjct: 183 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPR 242
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
A +VA P + C+ +D+ F +++ +I
Sbjct: 243 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 272
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 22/121 (18%)
Query: 37 GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTAN 96
G+ +I+QG GD F++I +G++ V + +T ++ +G FGE AL R A
Sbjct: 68 GETVIQQGDEGDNFYVIDQGEMDVYVNNEWAT------SVGEGGSFGELALIYGTPRAAT 121
Query: 97 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITT 156
+ A V ID++++ +++ + T +R++ EEF LS + ++ +
Sbjct: 122 VKAK--TNVKLWGIDRDSYRRIL----------MGSTLRKRKMYEEF----LSKVSILES 165
Query: 157 L 157
L
Sbjct: 166 L 166
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGE-LWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ ++ +++E L + L+ + +KG + +R + VV A + HSR
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG 159
Query: 327 IIYRDLKPENLLLST-SGYVKLVDFG 351
+++RD+K EN+L+ G KL+DFG
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEI--MGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
V+ +S++ + V+ + ++ +KEI + A I+ L+++F+ + L M+ E
Sbjct: 25 VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84
Query: 290 GGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVK 346
G +++ + ++ Y V EA +LHS NI + D++PEN++ T S +K
Sbjct: 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144
Query: 347 LVDFGFAKKL 356
+++FG A++L
Sbjct: 145 IIEFGQARQL 154
>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
pdb|1NE6|A Chain A, Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
Length = 283
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+++G I+ QG GD FFII +G V ++ + E + L D+FGE AL + R
Sbjct: 181 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPR 240
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
A +VA P + C+ +D+ F +++ +I
Sbjct: 241 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 270
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 22/121 (18%)
Query: 37 GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTAN 96
G+ +I+QG GD F++I +G++ V + +T ++ +G FGE AL R A
Sbjct: 66 GETVIQQGDEGDNFYVIDQGEMDVYVNNEWAT------SVGEGGSFGELALIYGTPRAAT 119
Query: 97 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITT 156
+ A V ID++++ +++ + T +R++ EEF LS + ++ +
Sbjct: 120 VKAK--TNVKLWGIDRDSYRRIL----------MGSTLRKRKMYEEF----LSKVSILES 163
Query: 157 L 157
L
Sbjct: 164 L 164
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
+R V +++Q+ ++ + +I M +C F V Y + +++ LM++ L + +
Sbjct: 82 KRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD-KFY 140
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
+ DKG +D + + +V+A ++LHS+ ++I+RD+KP N+L++ G VK+ DFG
Sbjct: 141 KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199
Query: 352 FAKKLI 357
+ L+
Sbjct: 200 ISGYLV 205
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 232 VDETSERRRA-PQIVETRQQ--QHIMSEKEIMGEANCDFIVKLYK--------------T 274
VD ++R A +IV T Q +H + E +I+ + D IVK+++ +
Sbjct: 31 VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
+ +Y++ E + +L +L ++G + R + ++ Y+HS N+++RDLKP
Sbjct: 91 LTELNSVYIVQE-YMETDLANVL-EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKP 148
Query: 335 ENLLLSTSGYV-KLVDFGFAKKLIGPRYS 362
NL ++T V K+ DFG A +++ P YS
Sbjct: 149 ANLFINTEDLVLKIGDFGLA-RIMDPHYS 176
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
+R V +++Q+ ++ + +I M +C F V Y + +++ LM++ L + +
Sbjct: 38 KRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD-KFY 96
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
+ DKG +D + + +V+A ++LHS+ ++I+RD+KP N+L++ G VK+ DFG
Sbjct: 97 KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155
Query: 352 FAKKLI 357
+ L+
Sbjct: 156 ISGYLV 161
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTS 163
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
+ RAPQ+ +E R + + S D I ++Y KY M++E LG L +
Sbjct: 45 KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 94
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
L D+ F T ++ +Y+HS+N+IYRD+KPEN L+ G + ++D
Sbjct: 95 FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 153
Query: 350 FGFAKKLIGP 359
FG AK+ I P
Sbjct: 154 FGLAKEYIDP 163
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+K D+ + Y ++ + H I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+K D+ + Y ++ + H I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 163
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174
>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+++G I+ QG GD FFII +G V ++ + E + L D+FGE AL + +
Sbjct: 185 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPK 244
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
A +VA P + C+ +D+ F +++ +I
Sbjct: 245 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 274
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 22/121 (18%)
Query: 37 GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTAN 96
G+ +I+QG GD F++I +G++ V + +T ++ +G FGE AL R A
Sbjct: 70 GETVIQQGDEGDNFYVIDQGEMDVYVNNEWAT------SVGEGGSFGELALIYGTPRAAT 123
Query: 97 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITT 156
+ A V ID++++ +++ + T +R++ EEF LS + ++ +
Sbjct: 124 VKAK--TNVKLWGIDRDSYRRIL----------MGSTLRKRKMYEEF----LSKVSILES 167
Query: 157 L 157
L
Sbjct: 168 L 168
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 127 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 181
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 163
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 161
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 112 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 166
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 167 DLKICDFGLAR 177
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 105 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 159
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 160 DLKICDFGLAR 170
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 115 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 169
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 170 DLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 161
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
+++ + +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 105 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 159
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 160 DLKICDFGLAR 170
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 112 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 166
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 167 DLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 113 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 167
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 168 DLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 104 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 158
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 159 DLKICDFGLAR 169
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
+++ + +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----- 300
E Q+Q +M +M ++C +IV+ Y + ++ ME L + DK
Sbjct: 61 EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME------LMSTSFDKFYKYV 114
Query: 301 -GNFDDATTR----FYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
DD T V+A ++L II+RD+KP N+LL SG +KL DFG +
Sbjct: 115 YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 355 KLI 357
+L+
Sbjct: 175 QLV 177
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLIG 358
+ Y ++ + Y+HS I +RD+KP+NLLL SG +KL+DFG AK LI
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
++ MSE IM + IVKL +++ +++ME GEL L R+K + T
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 126
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+ + +A YL S N ++RD+ N+L+++ VKL DFG ++
Sbjct: 127 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
Y++ E GG + + + + +F++ V A D+LH++ I +RDLKPEN+L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 341 TSGY---VKLVDFGFAKKL 356
VK+ DFG +
Sbjct: 146 HPNQVSPVKICDFGLGSGI 164
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
++ K ++ SER+ IVE RQ + N IVKLY + + ++M
Sbjct: 34 DVAIKQIESESERKAF--IVELRQ----------LSRVNHPNIVKLYGACLNP--VCLVM 79
Query: 286 ESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHS---RNIIYRDLKPENLLL 339
E GG L+ +L + A + + YLHS + +I+RDLKP NLLL
Sbjct: 80 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
Query: 340 STSGYV-KLVDFGFA 353
G V K+ DFG A
Sbjct: 140 VAGGTVLKICDFGTA 154
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
+++ + +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 162 DLKIXDFGLAR 172
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 141
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 116
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
++ K ++ SER+ IVE RQ + N IVKLY + + ++M
Sbjct: 33 DVAIKQIESESERKAF--IVELRQ----------LSRVNHPNIVKLYGACLNP--VCLVM 78
Query: 286 ESCLGGELWTILRDK---GNFDDATTRFYTACVVEAFDYLHS---RNIIYRDLKPENLLL 339
E GG L+ +L + A + + YLHS + +I+RDLKP NLLL
Sbjct: 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138
Query: 340 STSGYV-KLVDFGFA 353
G V K+ DFG A
Sbjct: 139 VAGGTVLKICDFGTA 153
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 279 KYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPEN 336
K L++ ME C G L W R D + + DY+HS+ +I+RDLKP N
Sbjct: 107 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 337 LLLSTSGYVKLVDFGFAKKL 356
+ L + VK+ DFG L
Sbjct: 167 IFLVDTKQVKIGDFGLVTSL 186
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
Y FK + LMES +L I+ R++ ++ Y+HS +I+RD
Sbjct: 129 YGEFKSVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
LKP NLL++ + +K+ DFG A+ L
Sbjct: 185 LKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
++ MSE IM + IVKL +++ +++ME GEL L R+K + T
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 110
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+ + +A YL S N ++RD+ N+L+++ VKL DFG ++
Sbjct: 111 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 115
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
++ MSE IM + IVKL +++ +++ME GEL L R+K + T
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+ + +A YL S N ++RD+ N+L+++ VKL DFG ++
Sbjct: 115 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 118
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLLL+T+
Sbjct: 111 LMET----DLYKLLKCQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
LME+ +L+ +L+ + +D F ++ Y+HS N+++RDLKP NLL++T+
Sbjct: 127 LMET----DLYKLLKSQQLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLINTTC 181
Query: 344 YVKLVDFGFAK 354
+K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 110
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S + VKL DFG ++
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 283 MLMESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL 339
+ ME C GG+L L N + R + + A YLH II+RDLKPEN++L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 340 STSG---YVKLVDFGFAKKL 356
K++D G+AK+L
Sbjct: 156 QPGPQRLIHKIIDLGYAKEL 175
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 283 MLMESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL 339
+ ME C GG+L L N + R + + A YLH II+RDLKPEN++L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 340 STSG---YVKLVDFGFAKKL 356
K++D G+AK+L
Sbjct: 155 QPGPQRLIHKIIDLGYAKEL 174
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
Y FK + LMES +L I+ R++ ++ Y+HS +I+RD
Sbjct: 128 YGEFKSVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
LKP NLL++ + +K+ DFG A+ L
Sbjct: 184 LKPSNLLVNENCELKIGDFGMARGL 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A+
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y + A YL S+ ++RD+ N+L+S + VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
++Q ++SE ++ E IV+ Y D+ LY++ME C GG+L +++ +++
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D+ + A H R+ +++RDLKP N+ L VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGD-----------PSRSFALKQMKKSQVMNLDDLR 195
R D V+ T+G G +GR + ++ D S + A KQM S+V L +L+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 196 TANIV 200
NIV
Sbjct: 64 HPNIV 68
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
++Q ++SE ++ E IV+ Y D+ LY++ME C GG+L +++ +++
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D+ + A H R+ +++RDLKP N+ L VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGD-----------PSRSFALKQMKKSQVMNLDDLR 195
R D V+ T+G G +GR + ++ D S + A KQM S+V L +L+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 196 TANIV 200
NIV
Sbjct: 64 HPNIV 68
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
++Q ++SE ++ E IV+ Y D+ LY++ME C GG+L +++ +++
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D+ + A H R+ +++RDLKP N+ L VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGD-----------PSRSFALKQMKKSQVMNLDDLR 195
R D V+ T+G G +GR + ++ D S + A KQM S+V L +L+
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 196 TANIV 200
NIV
Sbjct: 64 HPNIV 68
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVDFGFAKKLIGP 359
++ +Y+HS+N+IYRD+KPEN L+ G + ++DFG AK+ I P
Sbjct: 106 LLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDP 155
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 278 KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC------VVEAFDYLHSRNIIYRD 331
K YLY+ M+ C L + + + +D R + C + EA ++LHS+ +++RD
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLED---REHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
LKP N+ + VK+ DFG +
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAM 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
T Q + E +M D +V+LY ++ +Y++ E G L L+
Sbjct: 48 TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL 107
Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ ++A + E Y+ +N I+RDL+ N+L+S S K+ DFG A+
Sbjct: 108 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 157
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRN 326
IV L+ +K L ++ E L +L L D GN + + + ++ Y H +
Sbjct: 62 IVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+++RDLKP+NLL++ G +KL DFG A+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 41 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 98
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 99 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
T Q + E +M D +V+LY ++ +Y++ E G L L+
Sbjct: 49 TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL 108
Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ ++A + E Y+ +N I+RDL+ N+L+S S K+ DFG A+
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 158
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
+ ++E +M D +VKL+ K+ +Y++ E G L L+ +
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 113
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++A + E ++ RN I+RDL+ N+L+S S K+ DFG A+
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 159
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
+ ++E +M D +VKL+ K+ +Y++ E G L L+ +
Sbjct: 222 EAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++A + E ++ RN I+RDL+ N+L+S S K+ DFG A+
Sbjct: 281 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 45 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 102
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 103 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
+ ++E +M D +VKL+ K+ +Y++ E G L L+ +
Sbjct: 228 EAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++A + E ++ RN I+RDL+ N+L+S S K+ DFG A+
Sbjct: 287 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + +++ K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y V
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLV--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 46 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 103
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 46 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 103
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 52 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 109
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 110 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 118
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y+
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 164
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 165 ELKILDFGLARH 176
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + +++ K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y V
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLV--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 169 ELKILDFGLARH 180
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ + +G +L I++ + D +F ++ Y+HS II+RDLKP N+ ++
Sbjct: 110 LVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
++++DFG A++
Sbjct: 169 ELRILDFGLARQ 180
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
+ RAPQ+ +E R + + S D I ++Y KY M++E LG L +
Sbjct: 66 KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 115
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
L D+ F T ++ +Y+HS+N+IYRD+KPEN L+ G + ++D
Sbjct: 116 FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 174
Query: 350 FGFAKKLIGP 359
F AK+ I P
Sbjct: 175 FALAKEYIDP 184
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++ K I+G N K + F+D +Y++ME + L +++ + + + + Y
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
V +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 MLV--GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
+ RAPQ+ +E R + + S D I ++Y KY M++E LG L +
Sbjct: 45 KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 94
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
L D+ F T ++ +Y+HS+N+IYRD+KPEN L+ G + ++D
Sbjct: 95 FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 153
Query: 350 FGFAKKLIGP 359
F AK+ I P
Sbjct: 154 FALAKEYIDP 163
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YT 312
+ E I+ + + IV+L K+ +Y++ME GG+ T LR +G T
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+YL S+ I+RDL N L++ +K+ DFG +++
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 279 KYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPEN 336
K L++ ME C G L W R D + + DY+HS+ +I RDLKP N
Sbjct: 93 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 337 LLLSTSGYVKLVDFGFAKKL 356
+ L + VK+ DFG L
Sbjct: 153 IFLVDTKQVKIGDFGLVTSL 172
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+++LY + + LG L + + +G+F T Y V E YL S+
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
I+RDL NLLL+T VK+ DFG + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YT 312
+ E I+ + + IV+L K+ +Y++ME GG+ T LR +G T
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+YL S+ I+RDL N L++ +K+ DFG +++
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+++LY + + LG L + + +G+F T Y V E YL S+
Sbjct: 77 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
I+RDL NLLL+T VK+ DFG + L
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 173
Query: 344 YVKLVDFGFAK 354
+K++DFG A+
Sbjct: 174 ELKILDFGLAR 184
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
LG L + + +G+F T Y V E YL S+ I+RDL NLLL+T VK+
Sbjct: 98 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 349 DFGFAKKL 356
DFG + L
Sbjct: 158 DFGLMRAL 165
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 168 ELKILDFGLARH 179
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+++LY + + LG L + + +G+F T Y V E YL S+
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
I+RDL NLLL+T VK+ DFG + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG +
Sbjct: 163 ELKILDFGLCRH 174
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 168 ELKILDFGLARH 179
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
LG L + + +G+F T Y V E YL S+ I+RDL NLLL+T VK+
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
DFG + L
Sbjct: 154 DFGLMRAL 161
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 194 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHI 253
L+ N++ AD E + C F + + +R K +D + + Q E + +
Sbjct: 6 LKRDNLLIADIE-LGC-----GNFGSVRQGVYRMRKKQIDVAIKVLK--QGTEKADTEEM 57
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RDKGNFDDATTRF 310
M E +IM + + +IV+L + + L ++ME GG L L R++ +
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 116
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ V YL +N ++RDL N+LL Y K+ DFG +K L
Sbjct: 117 HQ--VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
LG L + + +G+F T Y V E YL S+ I+RDL NLLL+T VK+
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
DFG + L
Sbjct: 154 DFGLMRAL 161
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
LG L + + +G+F T Y V E YL S+ I+RDL NLLL+T VK+
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
DFG + L
Sbjct: 154 DFGLMRAL 161
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 165 ELKILDFGLARH 176
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
R + IM E+ G N ++ + + D+ +Y++ + + +L ++R N +
Sbjct: 54 RTFREIMILTELSGHENIVNLLNVLRADNDRD-VYLVFDY-METDLHAVIR--ANILEPV 109
Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ Y +++ YLHS +++RD+KP N+LL+ +VK+ DFG ++ + R
Sbjct: 110 HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 165 ELKILDFGLARH 176
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 170 ELKILDFGLARH 181
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 170 ELKILDFGLARH 181
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 170 ELKILDFGLARH 181
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 169 ELKILDFGLARH 180
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 183 ELKILDFGLARH 194
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGG-ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
I+K+ F+++ + ++ME G +L+ + D+ + +V A YL ++
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
II+RD+K EN++++ +KL+DFG A L
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 170 ELKILDFGLARH 181
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 168 ELKILDFGLARH 179
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 161
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 162 ELKILDFGLARH 173
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 173
Query: 344 YVKLVDFGFAK 354
+K++DFG A+
Sbjct: 174 ELKILDFGLAR 184
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 186 ELKILDFGLARH 197
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 169 ELKILDFGLARH 180
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 183 ELKILDFGLARH 194
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 182 ELKILDFGLARH 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 175 ELKILDFGLARH 186
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAK 354
+K++DFG A+
Sbjct: 175 ELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 175 ELKILDFGLARH 186
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 182 ELKILDFGLARH 193
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 169 ELKILDFGLARH 180
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 172
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 173 ELKILDFGLARH 184
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 165 ELKILDFGLARH 176
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 183 ELKILDFGLARH 194
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y+++E G L LR+ +
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 186 ELKILDFGLARH 197
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 168 ELKILDFGLARH 179
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 160 ELKILDFGLARH 171
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
Y++ E GG + + + + +F++ V A D+LH++ I +RDLKPEN+L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 341 TSGYVKLV-----DFGFAKKLIG 358
V V D G KL G
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNG 168
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 159 ELKILDFGLARH 170
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 191
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 192 ELKILDFGLARH 203
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 160 ELKILDFGLARH 171
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 163 ELKILDFGLARH 174
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
MSE E + EA + +V+LY ++ ++++ E G L LR+ + F
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 118
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
T + C V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 159 ELKILDFGLARH 170
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 159 ELKILDFGLARH 170
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 160
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 161 ELKILDFGLARH 172
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 279 KYLYMLME---SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
KYL ++ME L L + +R + Y + A ++HS I +RD+KP+
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 336 NLLL-STSGYVKLVDFGFAKKLI 357
NLL+ S +KL DFG AKKLI
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLI 193
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y+++E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 50 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 109
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
+ + +MSE +I+ + + + L K L +++E C G L T LR K N
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 303 ----FDDATTRFYTAC----VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D T + C V + ++L SR I+RDL N+LLS VK+ DFG A+
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 355 KL 356
+
Sbjct: 193 DI 194
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y+++E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
VI + +F Q++ + D ++V +E R+A + E R +H+ + + N
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
++ + + F + ++ M E L L+ +++ F R + +++ D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
H II+ DLKPEN+LL G +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ + +G +L I++ + D +F ++ Y+HS II+RDLKP N+ ++
Sbjct: 110 LVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
++++DFG A++
Sbjct: 169 ELRILDFGLARQ 180
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
VI + +F Q++ + D ++V +E R+A + E R +H+ + + N
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
++ + + F + ++ M E L L+ +++ F R + +++ D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
H II+ DLKPEN+LL G +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3CF6|E Chain E, Structure Of Epac2 In Complex With Cyclic-Amp And Rap
Length = 694
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 25 IVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE 84
++ F S K G + QG G +++II KG V V + + + TL++GD FG+
Sbjct: 54 VLIFESHA--KGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGK 106
Query: 85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
AL D R A+IV + + L +D+E FN+++ ++ +R K D+
Sbjct: 107 LALVNDAPRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 155
>pdb|2BYV|E Chain E, Structure Of The Camp Responsive Exchange Factor Epac2 In
Its Auto-Inhibited State
Length = 999
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ K G + QG G +++II KG V V + + + TL++GD FG+ AL D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
R A+IV + + L +D+E FN+++ ++ +R K D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 51 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|1O7F|A Chain A, Crystal Structure Of The Regulatory Domain Of Epac2
Length = 469
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ K G + QG G +++II KG V V + + + TL++GD FG+ AL D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
R A+IV + + L +D+E FN+++ ++ +R K D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 51 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYT 312
+ E +G+ C V+L + +++ LY+ E C G L G + +A Y
Sbjct: 107 VGSHEKVGQHPC--CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYL 163
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ A +LHS+ +++ D+KP N+ L G KL DFG +L
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 35/115 (30%)
Query: 268 IVKLYKTFKDKKYLYMLMESC---------------LGGELWTILRDKGNFDDATTRFYT 312
+++ + T KD+++ Y+ +E C LG E T+L+
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ------------- 126
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVK--LVDFGFAKKLIGPRYS 362
+LHS NI++RDLKP N+L+S G +K + DFG KKL R+S
Sbjct: 127 --TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 51 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 53 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 113 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN-FDDATTRF 310
M E E++ + N IVKL+ ++ ++ ++ME C G L+T+L + N + + F
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 311 YTAC--VVEAFDYLHSRNIIYRDLKPENLL--LSTSG--YVKLVDFGFAKKL 356
VV ++L I++R++KP N++ + G KL DFG A++L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 62 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 121
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 122 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ D +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVK-CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
+K++DFG A+
Sbjct: 159 ELKILDFGLARH 170
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
Q ++E +M + +V+L ++K LY++ E G L LR +G D
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+F + V EA +YL N ++RDL N+L+S K+ DFG K+
Sbjct: 110 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 157
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
Q ++E +M + +V+L ++K LY++ E G L LR +G D
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+F + V EA +YL N ++RDL N+L+S K+ DFG K+
Sbjct: 119 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
Q ++E +M + +V+L ++K LY++ E G L LR +G D
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+F + V EA +YL N ++RDL N+L+S K+ DFG K+
Sbjct: 104 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 278 KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC------VVEAFDYLHSRNIIYRD 331
K YLY+ M+ C L + + ++ R + C + EA ++LHS+ +++RD
Sbjct: 87 KVYLYIQMQLCRKENLKDWMNGRCTIEE---RERSVCLHIFLQIAEAVEFLHSKGLMHRD 143
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
LKP N+ + VK+ DFG +
Sbjct: 144 LKPSNIFFTMDDVVKVGDFGLVTAM 168
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + +++ K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLC--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL--RDKGN----FDDATTR 309
E +M E + IV+LY + L ++ E + +L + R GN + +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +++ + H I++RDLKP+NLL++ G +KL DFG A+
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
Q ++E +M + +V+L ++K LY++ E G L LR +G D
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+F + V EA +YL N ++RDL N+L+S K+ DFG K+
Sbjct: 291 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++D+G A+
Sbjct: 163 ELKILDYGLARH 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RD 299
Q E + +M E +IM + + +IV+L + + L ++ME GG L L R+
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE 431
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + V YL +N ++R+L N+LL Y K+ DFG +K L
Sbjct: 432 EIPVSNVAELLHQ--VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVDFGFAKKLIGP 359
++ +Y+H++++IYRD+KPEN L+ G + ++DFG AK+ I P
Sbjct: 109 LITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 158
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 114 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 281 LYMLMESCLGGELWTILRDKGN-----------FDDATTRFYTAC----VVEAFDYLHSR 325
L +++E C G L T LR K N + D T + C V + ++L SR
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
I+RDL N+LLS VK+ DFG A+ +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y+++E G L LR+ +
Sbjct: 50 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 109
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 164
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN-FDDATTRF 310
M E E++ + N IVKL+ ++ ++ ++ME C G L+T+L + N + + F
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 311 YTAC--VVEAFDYLHSRNIIYRDLKPENLL--LSTSG--YVKLVDFGFAKKL 356
VV ++L I++R++KP N++ + G KL DFG A++L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
VI + F Q++ + D ++V +E R+A + E R +H+ + + N
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
++ + + F + ++ M E L L+ +++ F R + +++ D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
H II+ DLKPEN+LL G +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 49 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L +++E C G L T LR K N + D T + C V + ++L S
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 283 MLMESCLGG--ELWTILRDKGNF--DDATTRFYTACVVEAFDYLHSRN--IIYRDLKPEN 336
+L E C G E + +G D FY C A ++H + II+RDLK EN
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC--RAVQHMHRQKPPIIHRDLKVEN 168
Query: 337 LLLSTSGYVKLVDFGFAKKLIG-PRYS 362
LLLS G +KL DFG A + P YS
Sbjct: 169 LLLSNQGTIKLCDFGSATTISHYPDYS 195
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
+ + +MSE +I+ + + + L K L +++E C G L T LR K N
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 303 --------FDDATTRFYTAC----VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
+ D T + C V + ++L SR I+RDL N+LLS VK+ DF
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 229
Query: 351 GFAKKL 356
G A+ +
Sbjct: 230 GLARDI 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
L+ + K L ++ + C G L+ L + T+F +++ DYLH
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 137
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++II+RDLK N+ L VK+ DFG A
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L +++E C G L T LR K N + D T + C V + ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
+ + +MSE +I+ + + + L K L +++E C G L T LR K N
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 303 FDDATTRF--------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ D F Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 355 KL 356
+
Sbjct: 193 DI 194
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ + +G +L I++ + D +F ++ Y+HS II+RDLKP N+ ++
Sbjct: 102 LVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 160
Query: 344 YVKLVDFGFAKK 355
++++DFG A++
Sbjct: 161 ELRILDFGLARQ 172
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L +++E C G L T LR K N + D T + C V + ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
L+ + K L ++ + C G L+ L + T+F +++ DYLH
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 125
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++II+RDLK N+ L VK+ DFG A
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L +++E C G L T LR K N + D T + C V + ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 475
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L +++E C G L T LR K N + D T + C V + ++L S
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 476
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y+++E G L LR+ +
Sbjct: 47 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 161
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLC--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 268 IVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
I+KL T KD ++ + + +L+ IL D FD RFY +++A DY
Sbjct: 95 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD---FD---IRFYMYELLKALDYC 148
Query: 323 HSRNIIYRDLKPENLLL-STSGYVKLVDFGFAK 354
HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 181
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L ++ E C G L T LR K N + D T + C V + ++L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L ++ E C G L T LR K N + D T + C V + ++L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
L ++ E C G L T LR K N + D T + C V + ++L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R I+RDL N+LLS VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
+R V +++Q+ ++ + +I +C F V Y + +++ L ++ L + +
Sbjct: 65 KRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLD-KFY 123
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
+ DKG +D + + +V+A ++LHS+ ++I+RD+KP N+L++ G VK DFG
Sbjct: 124 KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG 182
Query: 352 FAKKLI 357
+ L+
Sbjct: 183 ISGYLV 188
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 268 IVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
I+KL T KD ++ + + +L+ IL D FD RFY +++A DY
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD---FD---IRFYMYELLKALDYC 153
Query: 323 HSRNIIYRDLKPENLLL-STSGYVKLVDFGFAK 354
HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 186
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 295 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+R+L N L+ + VK+ DFG ++ + G Y+
Sbjct: 355 NAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---- 303
+++ +MSE +IM + IV L + ++ E C G+L LR K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 304 -------DDATTR---FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
A+TR +++ V + +L S+N I+RD+ N+LL+ K+ DFG A
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 354 KKLI 357
+ ++
Sbjct: 212 RDIM 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 253 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 312
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+A Y A + A +YL +N I+R+L N L+ + VK+ DFG ++ + G Y+
Sbjct: 313 NAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+L+ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE 180
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
D +++ + A LH N+I+RDLKP NLL++++ +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 34 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 87
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 88 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 141
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
D +++ + A LH N+I+RDLKP NLL++++ +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
D +++ + A LH N+I+RDLKP NLL++++ +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 33 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 86
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 87 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 140
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 282 YMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
Y++ME +GG+ ++ R KG A Y ++ A YLHS ++Y DLKPEN++L
Sbjct: 160 YIVME-YVGGQ--SLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML- 215
Query: 341 TSGYVKLVDFGFAKKL 356
T +KL+D G ++
Sbjct: 216 TEEQLKLIDLGAVSRI 231
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD 305
+++ +MSE +IM + IV L + ++ E C G+L LR K + D
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 306 ATTR--------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
R +++ V + +L S+N I+RD+ N+LL+ K+ DFG A+ ++
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD 305
+++ +MSE +IM + IV L + ++ E C G+L LR K + D
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 306 ATTR--------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
R +++ V + +L S+N I+RD+ N+LL+ K+ DFG A+ ++
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 37 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 90
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 91 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 144
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
E +IM + + IV+L F KD+ YL ++++ + ++ + R K
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPATVYRVARHYSRAKQTLPV 121
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 202
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 47 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 161
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 47 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G ++
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 115 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 357 I 357
+
Sbjct: 175 V 175
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 357 I 357
+
Sbjct: 186 V 186
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 26 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 79
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 80 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 133
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 118 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
Query: 357 I 357
+
Sbjct: 178 V 178
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
+
Sbjct: 174 V 174
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++ FG A+
Sbjct: 163 ELKILGFGLARH 174
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 131
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 133 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 357 I 357
+
Sbjct: 193 V 193
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 256 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 315
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+R+L N L+ + VK+ DFG ++ + G Y+
Sbjct: 316 SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 123
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R K + Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L
Sbjct: 127 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 357 I 357
+
Sbjct: 187 V 187
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
+ + +MSE +I+ + + + L K L +++E C G L T LR K N
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 303 ------FDDATTR----FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
+ D T Y+ V + ++L SR I+RDL N+LLS VK+ DFG
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 353 AKKL 356
A+ +
Sbjct: 195 ARDI 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 128 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 MLC--GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+G N K + F+D +Y++ME + L +++ + + + + Y ++
Sbjct: 86 IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 53 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 111
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 135 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 185
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+++E +M + + +IV++ + + ++ ++ME G L L+ + D
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 113
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 226 EIRTKYVDETSERRRAPQIVET-------RQQQHIMSEKEIMGEANCDFIVKLYKTFKDK 278
E+ + +S ++ P ++T +Q+ + E IMG+ + I++L
Sbjct: 59 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 279 KYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
K + ++ E G L LR+K G F + YL + N ++RDL N+
Sbjct: 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNI 178
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L++++ K+ DFG ++ L
Sbjct: 179 LVNSNLVCKVSDFGLSRVL 197
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
D RFY +++A DY HS I++RD+KP N+++ ++L+D+G A+
Sbjct: 128 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++D G A+
Sbjct: 163 ELKILDAGLARH 174
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
+T + + + E +M E +V+L + Y++ E G L LR+ +
Sbjct: 68 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV 127
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
A Y A + A +YL +N I+RDL N L+ + VK+ DFG ++ + G Y+
Sbjct: 128 TAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D T + ++ ++ + ++T +R ++V + H K I
Sbjct: 30 IGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH----KNI 83
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+ N K + F+D +Y++ME + L ++ + + + + Y ++
Sbjct: 84 ISLLNVFTPQKTLEEFQD---VYLVME-LMDANLCQVIHMELDHERMSYLLYQ--MLCGI 137
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
+++ +MSE +IM + IV L + ++ E C G+L LR K +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 308 TRF--------------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
F +++ V + +L S+N I+RD+ N+LL+ K+ DFG A
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 354 KKLI 357
+ ++
Sbjct: 212 RDIM 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ DYLH++NII+RD+K N+ L VK+ DFG A
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + E +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
+ + +G+ C D T + ++ ++ + ++T +R ++V + H K I
Sbjct: 32 IGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
+ N K + F+D +Y++ME + L ++ + + + + Y ++
Sbjct: 86 ISLLNVFTPQKTLEEFQD---VYLVME-LMDANLCQVIHMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of
Pka
Length = 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 33 FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
Y+ G+ IIR+G +G+ F++I G V V+ K + I L D+FGE AL D
Sbjct: 152 IYQPGETIIREGDQGENFYLIEYGAVDVSKKG-----QGVINKLKDHDYFGEVALLNDLP 206
Query: 93 RTANIVAADPEGVSCL 108
R A + A V+ L
Sbjct: 207 RQATVTATKRTKVATL 222
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 36 EGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTA 95
+G II+QG +GD F+++ KG V + + + + G FGE AL + R A
Sbjct: 37 KGATIIKQGDQGDYFYVVEKGTVDFYV------NDNKVNSSGPGSSFGELALMYNSPRAA 90
Query: 96 NIVAADPEGVSCLV--IDQETFNQLI 119
+VA CL+ +D+ TF +++
Sbjct: 91 TVVATS----DCLLWALDRLTFRKIL 112
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
L+ + L ++ + C G L+ L + T+F +++ DYLH
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 137
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++II+RDLK N+ L VK+ DFG A
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++DF A+
Sbjct: 163 ELKILDFYLARH 174
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++D G A+
Sbjct: 163 ELKILDRGLARH 174
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
L+ +G +L I++ + DD +F ++ Y+HS +II+RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
+K++D G A+
Sbjct: 163 ELKILDGGLARH 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 172
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 173 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL- 289
++ E + + I+E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 70 WIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 122
Query: 290 ------------GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
G L + K N + + + +YL R +++RDL N+
Sbjct: 123 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 182
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 183 LVKTPQHVKITDFGLAKLL 201
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 135
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 136 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 75 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 134 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 135
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 136 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 39 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 91
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 92 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 152 LVKTPQHVKITDFGLAKLL 170
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 43 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 95
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 96 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 156 LVKTPQHVKITDFGLAKLL 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 128 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 172
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 173 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 128
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 129 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 40 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 92
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 93 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 153 LVKTPQHVKITDFGLAKLL 171
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 38 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGLAKLL 169
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 37 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 89
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 90 STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 150 LVKTPQHVKITDFGLAKLL 168
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+M N I+ L F +K L Y++ME + L +++ + + + + Y
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 128
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ +LHS II+RDLKP N+++ + +K++DFG A+
Sbjct: 129 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 37 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 89
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 90 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 150 LVKTPQHVKITDFGLAKLL 168
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 36 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 88
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 89 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 149 LVKTPQHVKITDFGLAKLL 167
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4F7Z|A Chain A, Conformational Dynamics Of Exchange Protein Directly
Activated By Camp
Length = 999
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ K G + QG G +++II KG V V + + + TL++GD FG+ AL D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
R A+IV + + L +D+E N+++ ++ +R K D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDGNRILRDVEANTVRLKEHDQ 460
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 68 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 123 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
RQ++ +SE IMG+ I++L + + +L E G L + LR + G F
Sbjct: 59 RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + ++RDL N+L++++ K+ DFG ++ L
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 168
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
++ +Y+HS+N I+RD+KP+N L+ V ++DFG AKK
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
++ +Y+HS+N I+RD+KP+N L+ V ++DFG AKK
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
++ +Y+HS+N I+RD+KP+N L+ V ++DFG AKK
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ L+ + K L ++ + C G L+ L + F+ + DYLH+++I
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
I+RDLK N+ L VK+ DFG A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 167
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 36 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 88
Query: 291 ------------GELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
G L +R+ K N + + + +YL R +++RDL N+
Sbjct: 89 STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 149 LVKTPQHVKITDFGLAKLL 167
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 273 KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDL 332
+T D Y++M +G +L +++ + +D +F +++ Y+H+ II+RDL
Sbjct: 97 ETLDDFTDFYLVM-PFMGTDLGKLMKHEKLGED-RIQFLVYQMLKGLRYIHAAGIIHRDL 154
Query: 333 KPENLLLSTSGYVKLVDFGFAKK 355
KP NL ++ +K++DFG A++
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQ 177
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 123
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 124 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKY-----LYMLMESCLGGELWTILRDKGNFDDAT 307
I+ E I+ N D +VK+ K LY+++E + + R +
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELH 157
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ ++ Y+HS I++RDLKP N L++ VK+ DFG A+ + P
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 109
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 110 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 152
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 116
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 117 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 145 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 195
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 120 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 162
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
RQ++ +SE IMG+ I++L + + +L E G L + LR + G F
Sbjct: 57 RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + ++RDL N+L++++ K+ DFG ++ L
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 166
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
D R+Y +++A DY HS+ I++RD+KP N+++ ++L+D+G A+
Sbjct: 126 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 176
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 115
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 116 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V ++L SR I+RDL N+LLS + VK+ DFG A+ +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ DYLH+++II+RDLK N+ L VK+ DFG A
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 280 YLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
+L ++ C G L++++RD K D TR +V+ YLH++ I+++DLK +N+
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF 162
Query: 339 LSTSGYVKLVDFGF 352
+G V + DFG
Sbjct: 163 YD-NGKVVITDFGL 175
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 38 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 96
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 97 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 156
Query: 351 GFAKKL 356
G K L
Sbjct: 157 GLTKVL 162
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YTACVVEAFDYLHSRNIIYRDLK 333
+KDK+ L + E GG L I++ + + R + + YLHS NII+RDL
Sbjct: 77 YKDKR-LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 334 PENLLLSTSGYVKLVDFGFAKKLI 357
N L+ + V + DFG A+ ++
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMV 159
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
G K L
Sbjct: 159 GLTKVL 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 47 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 105
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 106 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 165
Query: 351 GFAKKL 356
G K L
Sbjct: 166 GLTKVL 171
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
G K L
Sbjct: 159 GLTKVL 164
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 58 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 116
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 351 GFAKKL 356
G K L
Sbjct: 177 GLTKVL 182
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 39 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 97
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 98 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 157
Query: 351 GFAKKL 356
G K L
Sbjct: 158 GLTKVL 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 44 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 102
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 162
Query: 351 GFAKKL 356
G K L
Sbjct: 163 GLTKVL 168
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 58 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 116
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 351 GFAKKL 356
G K L
Sbjct: 177 GLTKVL 182
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 101
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 102 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 351 GFAKKL 356
G K L
Sbjct: 162 GLTKVL 167
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 46 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 104
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 105 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 164
Query: 351 GFAKKL 356
G K L
Sbjct: 165 GLTKVL 170
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 71 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 129
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 351 GFAKKL 356
G K L
Sbjct: 190 GLTKVL 195
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
F + ++ +++ Y+HS +++RDLKP NL ++ +K++DFG A+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+ +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+ +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 40 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
G K L
Sbjct: 159 GLTKVL 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 45 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 103
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 104 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 163
Query: 351 GFAKKL 356
G K L
Sbjct: 164 GLTKVL 169
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEFLPYG 101
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 102 SLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 351 GFAKKL 356
G K L
Sbjct: 162 GLTKVL 167
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 38 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGRAKLL 169
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+ +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+ +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
F + ++ +++ Y+HS +++RDLKP NL ++ +K++DFG A+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 38 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGRAKLL 169
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
++ E + + I E R+ + KEI+ EA V D ++ L+ CL
Sbjct: 40 WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 92
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
+ I++ K N + + + +YL R +++RDL N+
Sbjct: 93 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 338 LLSTSGYVKLVDFGFAKKL 356
L+ T +VK+ DFG AK L
Sbjct: 153 LVKTPQHVKITDFGRAKLL 171
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTS-----GYVKLVDFGFAK 354
++ ++ HSR ++RDLKP+NLLLS S +K+ DFG A+
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFY 311
+ E IM IV L ++ E G L+ +L G + D R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 312 TAC-VVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A V + +YLH+RN I++RDLK NLL+ VK+ DFG ++
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 291 GELWT---ILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
G LW L+DKGNF + + + + +H++ +RDLKP N+LL G
Sbjct: 115 GTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV 174
Query: 347 LVDFG 351
L+D G
Sbjct: 175 LMDLG 179
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
++E +M + +V+LY + +Y++ E G L L+ +
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 110
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A + E ++ RN I+R+L+ N+L+S + K+ DFG A+
Sbjct: 111 AAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR 153
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYL-----YMLMESCLGGELWTILRDKGNFDDAT 307
I+ E I+ D+I++LY L Y+++E +L + + +
Sbjct: 72 ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEH 130
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ ++ +++H II+RDLKP N LL+ VK+ DFG A+ +
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
RQ++ +SE IMG+ + I++L + ++ E G L T LR G F
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL ++RDL N+L+ ++ K+ DFG ++ L
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 262 EANCDFIVK-LYKTFKDKKYLYMLMESCL-------------GGELWTILRDKGNFDDAT 307
+AN +F+ + L D +L L+ CL G L + K N
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL 141
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+ + + YL R +++RDL N+L+ + +VK+ DFG A+ L G
Sbjct: 142 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIGP 359
+++ YLH+ +++RDLKP N+L+ G VK+ D GFA+ P
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 167
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
T Y + E F +H II+RDLKP N LL+ VK+ DFG A+ +
Sbjct: 135 TILYNLLLGEKF--IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ E YLH+++ I+RDL N+LL VK+ DFG AK +
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK------ 300
T + + E +IM + D +V+LY ++ +Y++ E G L L+D
Sbjct: 45 TMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALK 103
Query: 301 -GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
N D A V Y+ N I+RDL+ N+L+ K+ DFG A+
Sbjct: 104 LPNLVDMA-----AQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR 153
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
RQ++ +SE IMG+ + I++L + ++ E G L T LR G F
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL ++RDL N+L+ ++ K+ DFG ++ L
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|3U0Z|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U0Z|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+GA G + I G V K +S E K L G +FGE L R
Sbjct: 103 FQPGDYIIREGAVGKKMYFIQHGVAGVITK--SSKEMK----LTDGSYFGEICLLTKGRR 156
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 157 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 190
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 262 EANCDFIVK-LYKTFKDKKYLYMLMESCL-------------GGELWTILRDKGNFDDAT 307
+AN +F+ + L D +L L+ CL G L + K N
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+ + + YL R +++RDL N+L+ + +VK+ DFG A+ L G
Sbjct: 119 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETR-----QQQHIMSEKEIMGEANC 265
+I + +F Q++ + D + ++V A +I++ + Q Q + E+M + +
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWV--------AIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 266 D---FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT---TRFYTACVVEAF 319
+ +IV L + F + +L ++ E L L+ +LR+ NF + TR + + A
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNT-NFRGVSLNLTRKFAQQMCTAL 151
Query: 320 DYLHSR--NIIYRDLKPENLLLSTS--GYVKLVDFGFAKKL 356
+L + +II+ DLKPEN+LL +K+VDFG + +L
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 192
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL ++I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 106 LGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
>pdb|3OTF|A Chain A, Structural Basis For The Camp-Dependent Gating In Human
Hcn4 Channel
Length = 220
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K T+ L G +FGE L R
Sbjct: 97 FQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETK------LADGSYFGEICLLTRGRR 150
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 151 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 184
>pdb|3U11|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U11|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K T+ L G +FGE L R
Sbjct: 103 FQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETK------LADGSYFGEICLLTRGRR 156
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 157 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 190
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 321 YLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKL 356
+L S N+ +RD+KP N+L++ + G +KL DFG AKKL
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK------- 300
+++ +MSE +IM + IV L + ++ E C G+L LR K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 301 -----GNFDDATTR----FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
N ++ + +++ V + +L S+N I+RD+ N+LL+ K+ DFG
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 211
Query: 352 FAKKLI 357
A+ ++
Sbjct: 212 LARDIM 217
>pdb|4HBN|A Chain A, Crystal Structure Of The Human Hcn4 Channel C-terminus
Carrying The S672r Mutation
Length = 205
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K T+ L G +FGE L R
Sbjct: 97 FQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETK------LADGSYFGEICLLTRGRR 150
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA + A + L +D FN+++ +R +
Sbjct: 151 TARVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 184
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETR-----QQQHIMSEKEIMGEANC 265
+I + +F Q++ + D + ++V A +I++ + Q Q + E+M + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWV--------AIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 266 D---FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT---TRFYTACVVEAF 319
+ +IV L + F + +L ++ E L L+ +LR+ NF + TR + + A
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNT-NFRGVSLNLTRKFAQQMCTAL 170
Query: 320 DYLHSR--NIIYRDLKPENLLLSTS--GYVKLVDFGFAKKL 356
+L + +II+ DLKPEN+LL +K+VDFG + +L
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ +SE IMG+ + ++ L + ++ E G L + LR + G F
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 135
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL N ++RDL N+L++++ K+ DFG ++ L
Sbjct: 136 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 43 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 101
Query: 292 ELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L+ D YT+ + + +YL ++ I+RDL N+L+ VK+ DF
Sbjct: 102 SLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 351 GFAKKL 356
G K L
Sbjct: 162 GLTKVL 167
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+H I++RD+K N+L++ G +KL DFG A+
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 351 G 351
G
Sbjct: 161 G 161
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Query: 351 G 351
G
Sbjct: 183 G 183
>pdb|3IDB|B Chain B, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 161
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 120
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF 143
R A I A P + L D+ TF ++I V +++R++ E F
Sbjct: 121 TPRAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESF 161
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 314 CVVEA--FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
C+ A YLH+R II+RD+K N+LL + K+ DFG +KK
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
++V ++ QH E EI+ D IVK YK ++ L ++ME G
Sbjct: 41 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 99
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L L + K D YT+ + + +YL ++ I+R+L N+L+ VK+ DF
Sbjct: 100 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDF 159
Query: 351 GFAKKL 356
G K L
Sbjct: 160 GLTKVL 165
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Query: 351 G 351
G
Sbjct: 161 G 161
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 351 G 351
G
Sbjct: 176 G 176
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 351 G 351
G
Sbjct: 208 G 208
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Query: 351 G 351
G
Sbjct: 195 G 195
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 351 G 351
G
Sbjct: 203 G 203
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 351 G 351
G
Sbjct: 176 G 176
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 351 G 351
G
Sbjct: 176 G 176
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 314 CVVEA--FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
C+ A YLH+R II+RD+K N+LL + K+ DFG +KK
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 278 KKYLYMLMESC---LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
K +Y++ + C L G L +L F + + ++ Y+H I++RD+K
Sbjct: 97 KASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 153
Query: 335 ENLLLSTSGYVKLVDFGFAK 354
N+L++ G +KL DFG A+
Sbjct: 154 ANVLITRDGVLKLADFGLAR 173
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 351 G 351
G
Sbjct: 203 G 203
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 351 G 351
G
Sbjct: 188 G 188
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 351 G 351
G
Sbjct: 189 G 189
>pdb|3ETQ|A Chain A, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
pdb|3ETQ|B Chain B, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
Length = 204
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE +L R
Sbjct: 102 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEISLLTRGRR 155
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 156 TASVRADTYSRLYSLSVD--NFNEVLEEYPMMRRAF 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 351 G 351
G
Sbjct: 188 G 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 351 G 351
G
Sbjct: 189 G 189
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 351 G 351
G
Sbjct: 189 G 189
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 351 G 351
G
Sbjct: 188 G 188
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ E YLHS++ I+R+L N+LL VK+ DFG AK +
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 351 G 351
G
Sbjct: 189 G 189
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+H I++RD+K N+L++ G +KL DFG A+
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 351 G 351
G
Sbjct: 188 G 188
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
Y+H I++RD+K N+L++ G +KL DFG A+
Sbjct: 139 YIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETR-----QQQHIMSEKEIMGEANC 265
+I + +F Q++ + D + ++V A +I++ + Q Q + E+M + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWV--------AIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 266 D---FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT---TRFYTACVVEAF 319
+ +IV L + F + +L ++ E L L+ +LR+ NF + TR + + A
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNT-NFRGVSLNLTRKFAQQMCTAL 170
Query: 320 DYLHSR--NIIYRDLKPENLLLSTS--GYVKLVDFGFAKKL 356
+L + +II+ DLKPEN+LL +K+VDFG + +L
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 292 ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDF 350
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ + G +KL+DF
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Query: 351 G 351
G
Sbjct: 156 G 156
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--------- 298
+++ +MSE +IM + IV L + ++ E C G+L LR
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 299 ------DKGNFDDATTR--------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
D D R +++ V + +L S+N I+RD+ N+LL+
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 196
Query: 345 VKLVDFGFAKKLI 357
K+ DFG A+ ++
Sbjct: 197 AKIGDFGLARDIM 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
+++L F+ +++E +L+ + ++G + R + V+EA + H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 327 IIYRDLKPENLLLSTS-GYVKLVDFG 351
+++RD+K EN+L+ + G +KL+DFG
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFY 311
+ E IM IV L ++ E G L+ +L G + D R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 312 TAC-VVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A V + +YLH+RN I++R+LK NLL+ VK+ DFG ++
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 106 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 104 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 55 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 114
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 173
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 283 MLMESCLGGELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
++ME G L L ++K + Y + + DYL SR ++RDL N+L+ +
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 161
Query: 342 SGYVKLVDFGFAKKL 356
VK+ DFG K +
Sbjct: 162 EHQVKIGDFGLTKAI 176
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 108
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ +SE IMG+ + I+ L K + ++ E G L LR + G F
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 131
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + ++RDL N+L++++ K+ DFG ++ L
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF---YTAC-----VVEAF 319
+++ Y + ++LY+ +E C L ++ K N D + Y +
Sbjct: 71 VIRYYCSETTDRFLYIALELC-NLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGV 128
Query: 320 DYLHSRNIIYRDLKPENLLLSTSG-------------YVKLVDFGFAKKL 356
+LHS II+RDLKP+N+L+STS + + DFG KKL
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + + DYL SR ++RDL N+L+ + VK+ DFG K +
Sbjct: 119 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF---YTAC-----VVEAF 319
+++ Y + ++LY+ +E C L ++ K N D + Y +
Sbjct: 71 VIRYYCSETTDRFLYIALELC-NLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGV 128
Query: 320 DYLHSRNIIYRDLKPENLLLSTSG-------------YVKLVDFGFAKKL 356
+LHS II+RDLKP+N+L+STS + + DFG KKL
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|3IDC|B Chain B, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 164
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 69 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 126
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLI 119
R A I A P + L D+ TF ++I
Sbjct: 127 TPRAATITATSPGALWGL--DRVTFRRII 153
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF---YTAC-----VVEAF 319
+++ Y + ++LY+ +E C L ++ K N D + Y +
Sbjct: 89 VIRYYCSETTDRFLYIALELC-NLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGV 146
Query: 320 DYLHSRNIIYRDLKPENLLLSTSG-------------YVKLVDFGFAKKL 356
+LHS II+RDLKP+N+L+STS + + DFG KKL
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF---YTAC-----VVEAF 319
+++ Y + ++LY+ +E C L ++ K N D + Y +
Sbjct: 89 VIRYYCSETTDRFLYIALELC-NLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGV 146
Query: 320 DYLHSRNIIYRDLKPENLLLSTSG-------------YVKLVDFGFAKKL 356
+LHS II+RDLKP+N+L+STS + + DFG KKL
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 129
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG A+ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVL 197
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 57 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ +SE IMG+ + I+ L K + ++ E G L LR + G F
Sbjct: 57 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + ++RDL N+L++++ K+ DFG ++ L
Sbjct: 117 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ E YLH+++ I+R+L N+LL VK+ DFG AK +
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 92 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 151
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
+ E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y+
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 179
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ + E IMG+ + I+ L K + ++ E G L T L+ + G F
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI 124
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ +SE IMG+ + I+ L K + ++ E G L LR + G F
Sbjct: 51 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 110
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + ++RDL N+L++++ K+ DFG ++ L
Sbjct: 111 QLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|2PTM|A Chain A, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
Length = 198
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ DY+I++G GD F I +G V + M ++ +L G +FGE L + R
Sbjct: 99 FQPADYVIQEGTFGDRMFFIQQGIVDIIM-----SDGVIATSLSDGSYFGEICLLTRERR 153
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 137
A++ + L + + FNQ++ +R K ++E + RR
Sbjct: 154 VASVKCETYCTLFSLSV--QHFNQVLDEFPAMR-KTMEEIAVRR 194
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR N
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR N
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
++ +++HS++ ++RD+KP+N L+ + V ++DFG AKK
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
FK + Y +M+ME LG +L I G F +T +++ +Y+H ++ D+K
Sbjct: 121 FKGRSYRFMVMER-LGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKA 179
Query: 335 ENLLLS--TSGYVKLVDFGFA 353
NLLL V L D+G +
Sbjct: 180 ANLLLGYKNPDQVYLADYGLS 200
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3U10|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 103 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEICLLTRGRR 156
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 157 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 190
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME----SCL----GGELWTILR 298
T + + E ++M + + +V+LY ++ +Y++ME CL GE+ LR
Sbjct: 54 TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLR 112
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
D A A + Y+ N ++RDL+ N+L+ + K+ DFG A+
Sbjct: 113 LPQLVDMA------AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1Q3E|A Chain A, Hcn2j 443-645 In The Presence Of Cgmp
pdb|1Q3E|B Chain B, Hcn2j 443-645 In The Presence Of Cgmp
Length = 207
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 100 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEICLLTRGRR 153
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 154 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 187
>pdb|1I6X|A Chain A, Structure Of A Star Mutant Crp-Camp At 2.2 A
pdb|1I6X|B Chain B, Structure Of A Star Mutant Crp-Camp At 2.2 A
Length = 209
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 10 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKHEEG-KEMILSYLNQGD 68
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 69 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 123
Query: 137 RRLNEE 142
++ E
Sbjct: 124 LQVTSE 129
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 254 MSEKEIMGEANCDF------IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
MSE E EA +VK Y + +Y++ E G L LR G + +
Sbjct: 45 MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS 104
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
+ C V E +L S I+RDL N L+ VK+ DFG + ++ +Y
Sbjct: 105 -QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ E YLH+++ I+R L N+LL VK+ DFG AK +
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
>pdb|3FFQ|A Chain A, Hcn2i 443-640 Apo-State
pdb|3FFQ|B Chain B, Hcn2i 443-640 Apo-State
Length = 202
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 100 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEICLLTRGRR 153
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 154 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 187
>pdb|3BPZ|A Chain A, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|B Chain B, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|C Chain C, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|D Chain D, Hcn2-I 443-460 E502k In The Presence Of Camp
Length = 202
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 100 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEICLLTRGRR 153
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 154 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 187
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ E YLH+++ I+R L N+LL VK+ DFG AK +
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
AC +E YL SRN I+RDL N +L+ V + DFG ++K+ Y
Sbjct: 147 ACGME---YLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
>pdb|2Q0A|A Chain A, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
pdb|2Q0A|B Chain B, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
Length = 200
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 98 FQPGDYIIREGTIGKKMYFIQHGVVSVLTK--GNKEMK----LSDGSYFGEICLLTRGRR 151
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ +R +
Sbjct: 152 TASVRADTYCRLYSLSVD--NFNEVLEEYPMMRRAF 185
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 262 EANCDFIVKLYKTFK----DKKYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTAC- 314
+ N D +V+L FK + ++ M+ E LG L W I K N+ R +
Sbjct: 91 DPNKDMVVQLIDDFKISGMNGIHVCMVFE-VLGHHLLKWII---KSNYQGLPVRCVKSII 146
Query: 315 --VVEAFDYLHSR-NIIYRDLKPENLLLST-SGYVK 346
V++ DYLHS+ II+ D+KPEN+L+ YV+
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVR 182
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-----------GNFDDATTR-----FY 311
I+ L + + YLY+ +E G L LR N +T +
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A V DYL + I+RDL N+L+ + K+ DFG ++
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 245 VETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-- 301
++ +++ +MSE ++M + + + IV L +Y++ E C G+L LR K
Sbjct: 87 ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREK 146
Query: 302 -----------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
F+D Y V + ++L ++ ++RDL N+L
Sbjct: 147 FSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ--VAKGMEFLEFKSCVHRDLAARNVL 204
Query: 339 LSTSGYVKLVDFGFAKKLI 357
++ VK+ DFG A+ ++
Sbjct: 205 VTHGKVVKICDFGLARDIM 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-----------GNFDDATTR-----FY 311
I+ L + + YLY+ +E G L LR N +T +
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
A V DYL + I+RDL N+L+ + K+ DFG ++
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN 302
R++ ++E +M E NC +V+L + ++ME G+L + LR + N
Sbjct: 57 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 303 FDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + YL++ ++RDL N ++ VK+ DFG + +
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD---------------- 299
E E++ + IVK Y D L M+ E G+L LR
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
KG + + + YL S++ ++RDL N L+ + VK+ DFG ++
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG ++ L
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 262 EANCDFIVKLYKTFK----DKKYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACV 315
+ N + +V+L FK + ++ M+ E LG L W I + + V
Sbjct: 97 DPNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 155
Query: 316 VEAFDYLHSR-NIIYRDLKPENLLLSTS 342
++ DYLH++ II+ D+KPEN+LLS +
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG + L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|3FWE|A Chain A, Crystal Structure Of The Apo D138l Cap Mutant
pdb|3FWE|B Chain B, Crystal Structure Of The Apo D138l Cap Mutant
Length = 210
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 11 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 69
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 70 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 124
Query: 137 RRLNEE 142
++ E
Sbjct: 125 LQVTSE 130
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V + +L S+N I+RDL N+LL+ K+ DFG A+ +
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHI 218
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 262 EANCDFIVKLYKTFK----DKKYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACV 315
+ N + +V+L FK + ++ M+ E LG L W I + + V
Sbjct: 81 DPNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 139
Query: 316 VEAFDYLHSR-NIIYRDLKPENLLLSTS 342
++ DYLH++ II+ D+KPEN+LLS +
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|1Q43|A Chain A, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q43|B Chain B, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q5O|A Chain A, Hcn2j 443-645 In The Presence Of Camp, Selenomethionine
Derivative
Length = 207
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ GDYIIR+G G + I G V V K + E K L G +FGE L R
Sbjct: 100 FQPGDYIIREGTIGKKXYFIQHGVVSVLTK--GNKEXK----LSDGSYFGEICLLTRGRR 153
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
TA++ A + L +D FN+++ R +
Sbjct: 154 TASVRADTYCRLYSLSVD--NFNEVLEEYPXXRRAF 187
>pdb|1CGP|A Chain A, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
pdb|1CGP|B Chain B, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
Length = 205
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 10 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 68
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 69 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 123
Query: 137 RRLNEE 142
++ E
Sbjct: 124 LQVTSE 129
>pdb|3MZH|A Chain A, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
pdb|3MZH|B Chain B, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
Length = 225
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQP 65
E+ RA V I + + G + +G GD +II GKVK+ + P
Sbjct: 4 EILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAP 63
Query: 66 NSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
+ E + + D FGE ++ RT++ A V + +D++ I+ EI
Sbjct: 64 DG-RENLLTIMGPSDMFGELSIFDPGPRTSS--ATTITEVRAVSMDRDALRSWIADRPEI 120
>pdb|2CGP|A Chain A, Catabolite Gene Activator ProteinDNA COMPLEX,
ADENOSINE-3', 5'-Cyclic-Monophosphate
pdb|1G6N|A Chain A, 2.1 Angstrom Structure Of Cap-Camp
pdb|1G6N|B Chain B, 2.1 Angstrom Structure Of Cap-Camp
pdb|3HIF|A Chain A, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3HIF|B Chain B, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3HIF|C Chain C, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3HIF|D Chain D, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3HIF|E Chain E, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3HIF|F Chain F, The Crystal Structure Of Apo Wild Type Cap At 3.6 A
Resolution.
pdb|3RYP|A Chain A, Domain-Domain Flexibility Leads To Allostery Within The
Camp Receptor Protein (Crp)
pdb|3RYP|B Chain B, Domain-Domain Flexibility Leads To Allostery Within The
Camp Receptor Protein (Crp)
pdb|3RYR|A Chain A, Domain-Domain Flexibility Leads To Allostery Within The
Camp Receptor Protein (Crp)
pdb|3RYR|B Chain B, Domain-Domain Flexibility Leads To Allostery Within The
Camp Receptor Protein (Crp)
Length = 210
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 11 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 69
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 70 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 124
Query: 137 RRLNEE 142
++ E
Sbjct: 125 LQVTSE 130
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V + +L S+N I+RDL N+LL+ K+ DFG A+ +
Sbjct: 170 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI 211
>pdb|1O3S|A Chain A, Protein-Dna Recognition And Dna Deformation Revealed In
Crystal Structures Of Cap-Dna Complexes
Length = 200
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 3 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 61
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 62 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 116
Query: 137 RRLNEE 142
++ E
Sbjct: 117 LQVTSE 122
>pdb|1RUO|A Chain A, Catabolite Gene Activator Protein (Cap) MutantDNA COMPLEX
+ Adenosine-3',5'-Cyclic-Monophosphate
pdb|1RUO|B Chain B, Catabolite Gene Activator Protein (Cap) MutantDNA COMPLEX
+ Adenosine-3',5'-Cyclic-Monophosphate
Length = 209
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 10 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 68
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 69 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 123
Query: 137 RRLNEE 142
++ E
Sbjct: 124 LQVTSE 129
>pdb|3H3U|A Chain A, Crystal Structure Of Crp (Camp Receptor Protein) From
Mycoba Tuberculosis
pdb|3H3U|B Chain B, Crystal Structure Of Crp (Camp Receptor Protein) From
Mycoba Tuberculosis
Length = 224
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQP 65
E+ RA V I + + G + +G GD +II GKVK+ + P
Sbjct: 3 EILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAP 62
Query: 66 NSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
+ E + + D FGE ++ RT++ A V + +D++ I+ EI
Sbjct: 63 DG-RENLLTIMGPSDMFGELSIFDPGPRTSS--ATTITEVRAVSMDRDALRSWIADRPEI 119
>pdb|1O3Q|A Chain A, Protein-Dna Recognition And Dna Deformation Revealed In
Crystal Structures Of Cap-Dna Complexes
pdb|1O3R|A Chain A, Protein-Dna Recognition And Dna Deformation Revealed In
Crystal Structures Of Cap-Dna Complexes
pdb|1O3T|A Chain A, Protein-Dna Recognition And Dna Deformation Revealed In
Crystal Structures Of Cap-Dna Complexes
pdb|1O3T|B Chain B, Protein-Dna Recognition And Dna Deformation Revealed In
Crystal Structures Of Cap-Dna Complexes
Length = 200
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 3 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 61
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 62 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 116
Query: 137 RRLNEE 142
++ E
Sbjct: 117 LQVTSE 122
>pdb|3D0S|A Chain A, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|3D0S|B Chain B, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|4A2U|A Chain A, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|B Chain B, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|C Chain C, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|D Chain D, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|E Chain E, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|F Chain F, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|G Chain G, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|H Chain H, Crp(Cap) From Myco. Tuberculosis, With Camp
Length = 227
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQP 65
E+ RA V I + + G + +G GD +II GKVK+ + P
Sbjct: 6 EILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAP 65
Query: 66 NSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
+ E + + D FGE ++ RT++ A V + +D++ I+ EI
Sbjct: 66 DG-RENLLTIMGPSDMFGELSIFDPGPRTSS--ATTITEVRAVSMDRDALRSWIADRPEI 122
>pdb|1RUN|A Chain A, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
pdb|1RUN|B Chain B, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
pdb|1J59|A Chain A, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
pdb|1J59|B Chain B, Catabolite Gene Activator Protein (Cap)DNA COMPLEX +
Adenosine-3',5'-Cyclic-Monophosphate
pdb|1LB2|A Chain A, Structure Of The E. Coli Alpha C-Terminal Domain Of Rna
Polymerase In Complex With Cap And Dna
pdb|1I5Z|A Chain A, Structure Of Crp-Camp At 1.9 A
pdb|1I5Z|B Chain B, Structure Of Crp-Camp At 1.9 A
pdb|1ZRC|A Chain A, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-Icap38 Dna
pdb|1ZRC|B Chain B, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-Icap38 Dna
pdb|1ZRD|A Chain A, 4 Crystal Structures Of Cap-dna With All Base-pair
Substitutions At Position 6, Cap-[6a;17t]icap38 Dna
pdb|1ZRD|B Chain B, 4 Crystal Structures Of Cap-dna With All Base-pair
Substitutions At Position 6, Cap-[6a;17t]icap38 Dna
pdb|1ZRE|A Chain A, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-[6g;17c]icap38 Dna
pdb|1ZRE|B Chain B, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-[6g;17c]icap38 Dna
pdb|1ZRF|A Chain A, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-[6c;17g]icap38 Dna
pdb|1ZRF|B Chain B, 4 Crystal Structures Of Cap-Dna With All Base-Pair
Substitutions At Position 6, Cap-[6c;17g]icap38 Dna
pdb|2GZW|A Chain A, Crystal Structure Of The E.coli Crp-camp Complex
pdb|2GZW|B Chain B, Crystal Structure Of The E.coli Crp-camp Complex
pdb|2GZW|C Chain C, Crystal Structure Of The E.coli Crp-camp Complex
pdb|2GZW|D Chain D, Crystal Structure Of The E.coli Crp-camp Complex
pdb|2WC2|A Chain A, Nmr Structure Of Catabolite Activator Protein In The
Unliganded State
pdb|2WC2|B Chain B, Nmr Structure Of Catabolite Activator Protein In The
Unliganded State
pdb|3IYD|G Chain G, Three-Dimensional Em Structure Of An Intact
Activator-Dependent Transcription Initiation Complex
pdb|3IYD|H Chain H, Three-Dimensional Em Structure Of An Intact
Activator-Dependent Transcription Initiation Complex
pdb|3N4M|A Chain A, E. Coli Rna Polymerase Alpha Subunit C-Terminal Domain In
Complex With Cap And Dna
Length = 209
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 10 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 68
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 69 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 123
Query: 137 RRLNEE 142
++ E
Sbjct: 124 LQVTSE 129
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
R++ ++E +M C +V+L + ++ME G+L + LR + ++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 307 TTRF---------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R A + + YL+++ ++RDL N +++ VK+ DFG + +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
+Q++ +SE IMG+ + ++ L + ++ E G L + LR + G F
Sbjct: 50 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 109
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL N ++R L N+L++++ K+ DFG ++ L
Sbjct: 110 QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL 159
>pdb|3I54|A Chain A, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|B Chain B, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|C Chain C, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|D Chain D, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I59|B Chain B, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQP 65
E+ RA V I + + G + +G GD +II GKVK+ + P
Sbjct: 28 EILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAP 87
Query: 66 NSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
+ E + + D FGE ++ RT++ A V + +D++ I+ EI
Sbjct: 88 DG-RENLLTIMGPSDMFGELSIFDPGPRTSS--ATTITEVRAVSMDRDALRSWIADRPEI 144
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V + +L S+N I+RDL N+LL+ K+ DFG A+ +
Sbjct: 154 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI 195
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
R++ ++E +M C +V+L + ++ME G+L + LR + ++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 307 TTRF---------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R A + + YL+++ ++RDL N +++ VK+ DFG + +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
>pdb|1HW5|A Chain A, The CapCRP VARIANT T127LS128A
pdb|1HW5|B Chain B, The CapCRP VARIANT T127LS128A
Length = 210
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 11 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 69
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 70 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 124
Query: 137 RR-LNEEFRSLRLSDL--RVITTL 157
+ L E+ +L D+ R+ TL
Sbjct: 125 LQVLAEKVGNLAFLDVTGRIAQTL 148
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
R++ ++E +M C +V+L + ++ME G+L + LR + ++
Sbjct: 59 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 118
Query: 307 TTRF---------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R A + + YL+++ ++RDL N +++ VK+ DFG + +
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
R++ ++E +M C +V+L + ++ME G+L + LR + ++
Sbjct: 61 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 120
Query: 307 TTRF---------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
R A + + YL+++ ++RDL N +++ VK+ DFG + +
Sbjct: 121 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
>pdb|3R6S|A Chain A, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|B Chain B, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|C Chain C, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|D Chain D, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|E Chain E, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|F Chain F, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
Length = 247
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ G I +G GD +II+ GKVK+ P+ E + + D FGE ++ R
Sbjct: 54 FPRGATIFDEGEPGDRLYIITSGKVKLARHAPDG-RENLLTIMGPSDMFGELSIFDPGPR 112
Query: 94 TANIV 98
T++ V
Sbjct: 113 TSSAV 117
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V + +L S+N I+RDL N+LL+ K+ DFG A+ +
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI 218
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V + +L S+N I+RDL N+LL+ K+ DFG A+ +
Sbjct: 172 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI 213
>pdb|3KCC|A Chain A, Crystal Structure Of D138l Mutant Of Catabolite Gene
Activator Protein
pdb|3KCC|B Chain B, Crystal Structure Of D138l Mutant Of Catabolite Gene
Activator Protein
Length = 260
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 24 TIVYFSSQTF---YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD 80
T+ +F S Y +I QG + +T + I KG V V +K +E + L +GD
Sbjct: 61 TLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGD 119
Query: 81 FFGEKAL--QGDDLRTANIVAADPEGVSCLV--IDQETFNQLISSLDEIRTKYVDETSER 136
F GE L +G + R+A + A +C V I + F QLI +I + + + R
Sbjct: 120 FIGELGLFEEGQE-RSAWVRAK----TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 174
Query: 137 RRLNEE 142
++ E
Sbjct: 175 LQVTSE 180
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + YL +++RDL N+L+ + +VK+ DFG A+ L
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V +YL S+ I+RDL N+L++ +K+ DFG A+ +
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,327,592
Number of Sequences: 62578
Number of extensions: 423324
Number of successful extensions: 2797
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1285
Number of HSP's gapped (non-prelim): 1351
length of query: 362
length of database: 14,973,337
effective HSP length: 100
effective length of query: 262
effective length of database: 8,715,537
effective search space: 2283470694
effective search space used: 2283470694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)