RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14740
(362 letters)
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 205 bits (524), Expect = 1e-63
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 60/240 (25%)
Query: 120 SSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
S+ E K ++ ++ + +L I TLG G FGRV LV+ +A
Sbjct: 13 ESVKEFLAKAKEDFLKKWE-TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-GNHYA 70
Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET-SER 238
+K + K +V ++ K ++ T +E+
Sbjct: 71 MKILDKQKV--------------------------------------VKLKQIEHTLNEK 92
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
R I+ N F+VKL +FKD LYM+ME GGE+++ LR
Sbjct: 93 R-------------------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
G F + RFY A +V F+YLHS ++IYRDLKPENLL+ GY+++ DFGFAK++ G
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 176 bits (448), Expect = 1e-52
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 59/214 (27%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
L D +++ TLG G FGRV L++ + R +A+K +KK V
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIV----------------- 44
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDET-SERRRAPQIVETRQQQHIMSEKEIMGEAN 264
+R K V+ T ER ++
Sbjct: 45 ---------------------VRLKQVEHTNDERL-------------------MLSIVT 64
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
FI++++ TF+D + ++M+M+ GGEL+++LR F + +FY A V A +YLHS
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
++IIYRDLKPEN+LL +G++K+ DFGFAK +
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 175 bits (447), Expect = 1e-52
Identities = 63/219 (28%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAAD 203
R R D + LG G F V L + SR +A+K ++K +
Sbjct: 25 RKKRPEDFKFGKILGEGSFSTVVLARELAT-SREYAIKILEKRHI--------------- 68
Query: 204 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA 263
I+ V E+++M
Sbjct: 69 -----------------------IKENKVPYV------------------TRERDVMSRL 87
Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
+ F VKLY TF+D + LY + GEL +R G+FD+ TRFYTA +V A +YLH
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+ II+RDLKPEN+LL+ ++++ DFG AK L
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 159 bits (404), Expect = 2e-45
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 63/237 (26%)
Query: 121 SLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFAL 180
++D ++Y D ++ R L ++ D V+ +G G FG V+LV+ + +A+
Sbjct: 46 NIDNFLSRYKDTINKIRDL-----RMKAEDYEVVKVIGRGAFGEVQLVRHKST-RKVYAM 99
Query: 181 KQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
K + K +++ D + ER
Sbjct: 100 KLLSKFEMIKRSD-------------SAFFW------------------------EERD- 121
Query: 241 APQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK 300
IM AN ++V+L+ F+D +YLYM+ME GG+L ++
Sbjct: 122 ------------------IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-N 162
Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ + RFYTA VV A D +HS I+RD+KP+N+LL SG++KL DFG K+
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 155 bits (393), Expect = 6e-44
Identities = 38/116 (32%), Positives = 70/116 (60%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ VE + +++ E +IM F+V L+ +F+D++ ++M+++ LGG+L L+ +
Sbjct: 52 KCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH 111
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
F + T + + +V A DYL ++ II+RD+KP+N+LL G+V + DF A L
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 153 bits (389), Expect = 6e-43
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 61/236 (25%)
Query: 126 RTKYVDETSER-RRLNEEFRSLRLS--DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQ 182
R K + E E + + + +RL D ++ +G G FG V +V++ + + FA+K
Sbjct: 48 REKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKI 106
Query: 183 MKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAP 242
+ K +++ + +C + ER
Sbjct: 107 LNKWEMLKRAE-------------TAC-------------------FR-----EERD--- 126
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKG 301
++ + +I L+ F+D LY++M+ +GG+L T+L + +
Sbjct: 127 ----------------VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED 170
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ RFY A +V A D +H + ++RD+KP+N+L+ +G+++L DFG KL+
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 147 bits (374), Expect = 3e-42
Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 57/217 (26%)
Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAAD 203
R L D + LG G FG V L + + ++ I+A
Sbjct: 4 RQWALEDFEIGRPLGKGKFGNVYLAR-----------------------EKQSKFILALK 40
Query: 204 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA 263
V+ + Q+ + + + E EI
Sbjct: 41 -------VLFKA---------------------------QLEKAGVEHQLRREVEIQSHL 66
Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
I++LY F D +Y+++E G ++ L+ FD+ T Y + A Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
S+ +I+RD+KPENLLL ++G +K+ DFG++ R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 148 bits (375), Expect = 3e-41
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 61/236 (25%)
Query: 126 RTKYVDETSERRR-LNEEFRSLRLS--DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQ 182
+ KYV + + + + +RL D ++ +G G F V +V++ + +A+K
Sbjct: 35 QDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQT-GQVYAMKI 93
Query: 183 MKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAP 242
M K ++ + VSC + ER
Sbjct: 94 MNKWDMLKRGE-------------VSC-------------------FR-----EERD--- 113
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++ + +I +L+ F+D+ YLY++ME +GG+L T+L G
Sbjct: 114 ----------------VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE 157
Query: 303 -FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
RFY A +V A D +H ++RD+KP+N+LL G+++L DFG KL
Sbjct: 158 RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 143 bits (363), Expect = 1e-40
Identities = 37/118 (31%), Positives = 64/118 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
Q+ + + + E EI I+++Y F D+K +Y+++E GEL+ L+ G
Sbjct: 51 QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR 110
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
FD+ + + + +A Y H R +I+RD+KPENLL+ G +K+ DFG++ R
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 143 bits (362), Expect = 5e-40
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 57/228 (25%)
Query: 134 SERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ--IAGDPSRSFALKQMKKSQVMNL 191
S +N +R ++ LG GG+G+V V+ + + FA+K +KK
Sbjct: 2 SSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK------ 55
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
A IV K T
Sbjct: 56 -----AMIVR--------------------------NAKDTAHT---------------- 68
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
+E+ I+ E FIV L F+ LY+++E GGEL+ L +G F + T FY
Sbjct: 69 --KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY 126
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
A + A +LH + IIYRDLKPEN++L+ G+VKL DFG K+ I
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 142 bits (361), Expect = 6e-40
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 59/232 (25%)
Query: 130 VDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ--IAGDPSRSFALKQMKKSQ 187
+ E + + E S ++ LG G FG+V LV+ D + +A+K
Sbjct: 5 IKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV----- 59
Query: 188 VMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
L+ A +
Sbjct: 60 ------LKKATLKV---------------------------------------------- 67
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
R + E++I+ E N FIVKL+ F+ + LY++++ GG+L+T L + F +
Sbjct: 68 RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 127
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+FY A + A D+LHS IIYRDLKPEN+LL G++KL DFG +K+ I
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 143 bits (362), Expect = 1e-39
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 58/231 (25%)
Query: 130 VDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQ 187
V L + + + ++ LG G +G+V LV+ D + +A+K
Sbjct: 35 VKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV----- 89
Query: 188 VMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
L+ A IV
Sbjct: 90 ------LKKATIVQKA-------------------------------------------- 99
Query: 248 RQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ +H +E++++ F+V L+ F+ + L+++++ GGEL+T L + F +
Sbjct: 100 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH 159
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ Y +V A ++LH IIYRD+K EN+LL ++G+V L DFG +K+ +
Sbjct: 160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 140 bits (356), Expect = 9e-39
Identities = 46/117 (39%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ ++++HIMSE+ ++ + F+V L+ +F+ LY +++ GGEL+ L+ +
Sbjct: 76 ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC 135
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
F + RFY A + A YLHS NI+YRDLKPEN+LL + G++ L DFG K+ I
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 136 bits (344), Expect = 3e-37
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
++ + M EK ++ A F+ ++ TF+ K+ L+ +ME GG+L ++
Sbjct: 55 VLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 114
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
FD + FY A ++ +LHS+ I+YRDLK +N+LL G++K+ DFG K+ +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 135 bits (343), Expect = 4e-37
Identities = 41/116 (35%), Positives = 64/116 (55%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
I+ + H ++E ++ F+ L F+ L +ME GGEL+ L + F
Sbjct: 43 IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF 102
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ RFY A +V A +YLHSR+++YRD+K ENL+L G++K+ DFG K+ I
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 139 bits (352), Expect = 1e-36
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 63/289 (21%)
Query: 81 FFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSL-----DEIRTKYVDETSE 135
+ ++ L + + + + + + F I + ++ K+++
Sbjct: 112 YIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKF 171
Query: 136 RRRLN----EEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNL 191
R E L ++D V +G GGFG V + A D + +A+K + K ++
Sbjct: 172 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMK 230
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
A +ER
Sbjct: 231 QGETLAL-------------------------------------NERI------------ 241
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
++ ++ +C FIV + F L +++ GG+L L G F +A RFY
Sbjct: 242 -ML---SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
A ++ +++H+R ++YRDLKP N+LL G+V++ D G A +
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 133 bits (338), Expect = 3e-36
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ + + +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ +
Sbjct: 47 VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 106
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ RFY+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 132 bits (335), Expect = 6e-36
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
I++ + M+EK I+ A N F+ +L+ F+ L+ +ME GG+L ++
Sbjct: 61 ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR 120
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
FD+A RFY A ++ A +LH + IIYRDLK +N+LL G+ KL DFG K+ I
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177
Score = 37.6 bits (88), Expect = 0.004
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDD 193
L + + I LG G FG+V L ++ +A+K +KK ++ DD
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKET-GDLYAVKVLKKDVILQDDD 66
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 132 bits (334), Expect = 7e-36
Identities = 44/245 (17%), Positives = 91/245 (37%), Gaps = 56/245 (22%)
Query: 119 ISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSF 178
+ S+ +I + Y + + + E + ++D R+I TL G F ++ L + + +
Sbjct: 3 LGSMKDILSNYSNLIYLNKYVKE--KDKYINDYRIIRTLNQGKFNKIILCEKDN---KFY 57
Query: 179 ALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 238
ALK+ +KS + D +
Sbjct: 58 ALKKYEKSLLEKKRDF------------------------------------------TK 75
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
+I + +E +I+ + ++ + + +Y++ E +
Sbjct: 76 SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE 135
Query: 299 DKGNFDDATT--------RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVD 349
D T + V+ +F Y+H+ +NI +RD+KP N+L+ +G VKL D
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD 195
Query: 350 FGFAK 354
FG ++
Sbjct: 196 FGESE 200
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 132 bits (334), Expect = 2e-35
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ + + +EK + +A N F+V L+ F+ + L+ ++E GG+L ++ +
Sbjct: 90 VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 149
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ RFY+A + A +YLH R IIYRDLK +N+LL + G++KL D+G K+ + P
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 131 bits (332), Expect = 2e-35
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+++ + M EK ++ F+ +L+ F+ LY +ME GG+L ++ G
Sbjct: 58 VIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR 117
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
F + FY A + +L S+ IIYRDLK +N++L + G++K+ DFG K+ I
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 132 bits (335), Expect = 7e-35
Identities = 56/244 (22%), Positives = 89/244 (36%), Gaps = 64/244 (26%)
Query: 123 DEIRTKYVDETSERRRL---NEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
+++D R L E + + LG GGFG V Q+ + +A
Sbjct: 156 QAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKAT-GKLYA 214
Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 239
K++ K ++ + E++
Sbjct: 215 CKKLNKKRLKKRKG-------------YQGAM------------------------VEKK 237
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WT 295
I+ + + FIV L F+ K L ++M GG++ +
Sbjct: 238 -------------------ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278
Query: 296 ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ D F + FYTA +V ++LH RNIIYRDLKPEN+LL G V++ D G A +
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 356 LIGP 359
L
Sbjct: 339 LKAG 342
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 133 bits (336), Expect = 1e-34
Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 56/250 (22%)
Query: 110 IDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ 169
+ Q+ I + + T + N ++L+D + LG G FG+V L +
Sbjct: 302 LRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSE 361
Query: 170 IAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT 229
G +A+K +KK V+ DD V C +
Sbjct: 362 RKGT-DELYAVKILKKDVVIQDDD-------------VECTM------------------ 389
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
E+R ++ F+ +L+ F+ LY +ME
Sbjct: 390 ------VEKR----VLALP--------------GKPPFLTQLHSCFQTMDRLYFVMEYVN 425
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
GG+L ++ G F + FY A + +L S+ IIYRDLK +N++L + G++K+ D
Sbjct: 426 GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIAD 485
Query: 350 FGFAKKLIGP 359
FG K+ I
Sbjct: 486 FGMCKENIWD 495
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 130 bits (328), Expect = 3e-34
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
IV + H ++E ++ + F+ L +F+ L +ME GGEL+ L + F
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 245
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
+ RFY A +V A DYLHS +N++YRDLK ENL+L G++K+ DFG K+ I
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains,
cyclic nucleotide protein transferase, PKG; HET: CMP;
2.50A {Bos taurus}
Length = 299
Score = 123 bits (309), Expect = 9e-33
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
+ + +T Y+ G+YIIRQGARGDTFFIISKGKV VT + + + ++RTL KGD+
Sbjct: 173 LSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDW 232
Query: 82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNE 141
FGEKALQG+D+RTAN++AA E V+CLVID+++F LI LD++ K ++ + +
Sbjct: 233 FGEKALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEA 290
Query: 142 E---FRSLR 147
E F +L+
Sbjct: 291 EAAFFANLK 299
Score = 104 bits (261), Expect = 5e-26
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
Y + II++G G +++ GKV+VT E + T+ G FGE A+ + R
Sbjct: 67 YGKDSCIIKEGDVGSLVYVMEDGKVEVTK------EGVKLCTMGPGKVFGELAILYNCTR 120
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET------------SERRRLNE 141
TA + V ID++ F ++ I+ E +L +
Sbjct: 121 TATVKTLVN--VKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLAD 178
Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
+ I G G G+V + + L+ + K L
Sbjct: 179 VLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKAL 238
Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
+D+RTAN++AA E V+CLVID+++F LI LD++ K ++ + +
Sbjct: 239 QGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAK 287
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 127 bits (320), Expect = 1e-32
Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 62/239 (25%)
Query: 123 DEIRTKYVDETSERRRL---NEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
Y+D R L E + + + R LG GGFG V Q+ + +A
Sbjct: 155 VAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRAT-GKMYA 213
Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 239
K+++K ++ + + +E++
Sbjct: 214 CKKLEKKRIKKRKG-------------EAMAL------------------------NEKQ 236
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
I+ + N F+V L ++ K L +++ GG+L +
Sbjct: 237 -------------------ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277
Query: 300 KGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
G F +A FY A + + LH I+YRDLKPEN+LL G++++ D G A +
Sbjct: 278 MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 120 bits (303), Expect = 1e-31
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 245 VETRQQQHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ + +E + + + D I++LY +Y+YM+ME C +L + L+ K +
Sbjct: 65 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 123
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D + Y ++EA +H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 120 bits (302), Expect = 5e-31
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 251 QHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+E + + + D I++LY +Y+YM+ME C +L + L+ K + D
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y ++EA +H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 119 bits (299), Expect = 8e-31
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 245 VETRQQQHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ + +E + + + D I++LY +Y+YM+ME C +L + L+ K +
Sbjct: 46 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D + Y ++EA +H I++ DLKP N L+ G +KL+DFG A ++
Sbjct: 105 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 157
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 117 bits (296), Expect = 8e-31
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 52 LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA 111
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 117 bits (295), Expect = 2e-30
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+++ Q++ + E I +V + F+D ++++++E C L + + +
Sbjct: 78 LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ R+Y +V YLH +I+RDLK NL L+ VK+ DFG A K+
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 116 bits (292), Expect = 2e-30
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 58/214 (27%)
Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEG 206
++ D +V LG G F V + + T VA
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAE-----------------------SIHTGLEVAIK--- 42
Query: 207 VSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD 266
+ID++ + + Q + +E +I +
Sbjct: 43 ----MIDKK---------------------------AMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 267 FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSR 325
I++LY F+D Y+Y+++E C GE+ L+++ F + R + ++ YLHS
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
I++RDL NLLL+ + +K+ DFG A +L P
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 114 bits (288), Expect = 1e-29
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 248 RQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDD 305
+ + ++E + V+L + +++ LY+ E C G L G +
Sbjct: 98 KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPE 156
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A Y + A +LHS+ +++ D+KP N+ L G KL DFG +L
Sbjct: 157 AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207
Score = 30.4 bits (69), Expect = 0.96
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 9/56 (16%)
Query: 131 DETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS 186
D + + F+ L LG G +G V V+ D R +A+K+
Sbjct: 47 DPSRPESFFQQSFQRLSR--------LGHGSYGEVFKVRSKED-GRLYAVKRSMSP 93
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 109 bits (275), Expect = 1e-27
Identities = 46/223 (20%), Positives = 78/223 (34%), Gaps = 27/223 (12%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQ-----------VMNLDDLRT 196
L+D I +G GGFG V + D ++A+K+++ V L L
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVD-DCNYAIKRIRLPNRELAREKVMREVKALAKLEH 63
Query: 197 ANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSE 256
IV + + I DE + S +
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPM------------DAPSVK 111
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTA 313
M + V + K YLY+ M+ C L + + + +
Sbjct: 112 IRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI 171
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ EA ++LHS+ +++RDLKP N+ + VK+ DFG +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 108 bits (272), Expect = 2e-27
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-------------KKYLYMLMESCLGGELW 294
+ I+SE ++ N ++V+ Y + + K L++ ME C G L+
Sbjct: 44 EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY 103
Query: 295 TILRDKGNFDD-ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
++ + ++EA Y+HS+ II+RDLKP N+ + S VK+ DFG A
Sbjct: 104 DLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 354 KKL 356
K +
Sbjct: 164 KNV 166
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 109 bits (274), Expect = 2e-27
Identities = 29/111 (26%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDD 305
++++ E ++ IV+ ++F++ LY++M+ C GG+L+ + + F +
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + A ++H R I++RD+K +N+ L+ G V+L DFG A+ L
Sbjct: 125 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit,
CAMP-dependent protein kinase, alpha-catalytic SU;
cyclic adenosine monophosphate; HET: SEP TPO ANP TAM;
2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Length = 291
Score = 108 bits (270), Expect = 3e-27
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
LT+ +++G I+ QG GD FFII +G V ++ + E + L D+
Sbjct: 173 RLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDY 232
Query: 82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL 139
FGE AL + + A +VA P + C+ +D+ F +++ +I + + + + L
Sbjct: 233 FGEIALLMNRPKAATVVARGP--LKCVKLDRPRFERVLGPCSDILKRNIQQYNSFVSL 288
Score = 90.8 bits (225), Expect = 5e-21
Identities = 42/229 (18%), Positives = 94/229 (41%), Gaps = 34/229 (14%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ G+ +I+QG GD F++I +G++ V + ++ ++ +G FGE AL R
Sbjct: 67 FIAGETVIQQGDEGDNFYVIDQGEMDVYV------NNEWATSVGEGGSFGELALIYGTPR 120
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET------------SERRRLNE 141
A + A V ID++++ +++ + K +E ER + +
Sbjct: 121 AATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVAD 178
Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
++ D + I G G G ++Q + + ++ S + L
Sbjct: 179 ALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIAL 238
Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 238
+ + A +VA P + C+ +D+ F +++ +I + + + +
Sbjct: 239 LMNRPKAATVVARGP--LKCVKLDRPRFERVLGPCSDILKRNIQQYNSF 285
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit,
CAMP-dependent protein kinase catalytic subunit A;
isoform diversity; HET: TPO SEP ATP; 3.70A {Homo
sapiens}
Length = 381
Score = 109 bits (274), Expect = 3e-27
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
LT+ +++G+ I+ QG GD F+II++G V ++ + E + L D+
Sbjct: 264 RLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDY 323
Query: 82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
FGE AL + R A +VA P + C+ +D+ F +++ EI + + +
Sbjct: 324 FGEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEILKRNIQRYNS 375
Score = 91.7 bits (227), Expect = 7e-21
Identities = 43/228 (18%), Positives = 91/228 (39%), Gaps = 34/228 (14%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ G+ +I+QG GD F+++ +G+V V + +++ + +G FGE AL R
Sbjct: 158 HIAGETVIQQGNEGDNFYVVDQGEVDVYV------NGEWVTNISEGGSFGELALIYGTPR 211
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD------------ETSERRRLNE 141
A + A + ID++++ +++ + K + E ER + +
Sbjct: 212 AATVKAKTD--LKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVAD 269
Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
++ D I G G G ++Q + ++ S + L
Sbjct: 270 ALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIAL 329
Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 237
+ R A +VA P + C+ +D+ F +++ EI + + +
Sbjct: 330 LLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEILKRNIQRYNS 375
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 108 bits (273), Expect = 3e-27
Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLG 290
V + S + A +I+ R + + E + IVKL++ F D+ + +++ME G
Sbjct: 31 VHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKL 347
GEL+ ++ K +F + + +V A ++H +++RDLKPENLL + +K+
Sbjct: 91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI 150
Query: 348 VDFGFAKKL 356
+DFGFA+
Sbjct: 151 IDFGFARLK 159
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 108 bits (271), Expect = 4e-27
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGN--- 302
R M E E++ + N IVKL+ ++ ++ ++ME C G L+T+L + N
Sbjct: 49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKL 356
++ VV ++L I++R++KP N++ KL DFG A++L
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 109 bits (273), Expect = 5e-27
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGN--- 302
R M E E++ + N IVKL+ ++ ++ ++ME C G L+T+L + N
Sbjct: 49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKL 356
++ VV ++L I++R++KP N++ KL DFG A++L
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG
potassium channel; dimer helical bundle beta barrel core
with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium
loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A*
1u12_A 3co2_A
Length = 138
Score = 101 bits (254), Expect = 2e-26
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 33 FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
G I R G GD F + +G V V P L G FFGE AL +
Sbjct: 38 TVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP--------VELGPGAFFGEMALISGEP 89
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE 142
R+A + AA VS L + F L SS EI + ERR
Sbjct: 90 RSATVSAATT--VSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGAAAS 137
Score = 41.1 bits (97), Expect = 8e-05
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
+ R+A + AA VS L + F L SS EI + ERR A
Sbjct: 87 GEPRSATVSAATT--VSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGA 134
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 107 bits (268), Expect = 2e-26
Identities = 34/252 (13%), Positives = 74/252 (29%), Gaps = 41/252 (16%)
Query: 112 QETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIA 171
+ T + S+ D + + + T + R+ E R L T LG
Sbjct: 37 RTTSEYMQSAADSLVSTSLWNTGQPFRVESEL-GERPRTLVRGTVLGQEDPYAYLEATDQ 95
Query: 172 GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 231
SF + ++ + + + +
Sbjct: 96 ET-GESFEVHVPYFTERPPSNAI-------------------------------KQMKEE 123
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLME 286
V R + + + +++ + ++++ +D +LY M+
Sbjct: 124 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ 183
Query: 287 SCL---GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
S L G L + + T V+ LH +++ L+P +++L G
Sbjct: 184 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 243
Query: 344 YVKLVDFGFAKK 355
V L F +
Sbjct: 244 GVFLTGFEHLVR 255
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 106 bits (266), Expect = 3e-26
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ + E + IV LY ++ ++ + ME GG L +++ G +
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL 153
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKL 356
+Y +E +YLH+R I++ D+K +N+LLS+ G L DFG A L
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 104 bits (261), Expect = 6e-26
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIM----GEANCDFIVKLYKTFKDKKYLYMLM 285
K +D T + + V+ ++ + E +I+ G N I++L T++ + +++
Sbjct: 48 KIIDVTGGGSFSAEEVQELREA-TLKEVDILRKVSGHPN---IIQLKDTYETNTFFFLVF 103
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
+ GEL+ L +K + TR ++E LH NI++RDLKPEN+LL +
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI 163
Query: 346 KLVDFGFAKKL 356
KL DFGF+ +L
Sbjct: 164 KLTDFGFSCQL 174
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide
binding protein, structural genomics; HET: MSE CMP;
1.79A {Methylobacillus flagellatus KT}
Length = 187
Score = 101 bits (254), Expect = 7e-26
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ +G GD +I G+V V PN + I + G GE ++ R
Sbjct: 67 APRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAIIGEMSMIDGMPR 125
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY----VDETSER-RRLNEEFRSLRL 148
+A+ VA+ P V+ ++ QL++++ ++ K + + R R + L
Sbjct: 126 SASCVASLP--TDFAVLSRDALYQLLANMPKLGNKVLIRLLQLLTARFRESYDRILPKTL 183
Query: 149 SDL 151
+L
Sbjct: 184 GEL 186
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 104 bits (261), Expect = 7e-26
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ + I+ E E++ + + I+KL++ +D Y++ E GGEL+ + + F
Sbjct: 60 AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL 356
+ V Y+H NI++RDLKPEN+LL + +K++DFG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 104 bits (261), Expect = 1e-25
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMES 287
++ + + A +I+E + + + E E++ + +++L + F+++ Y++ E
Sbjct: 33 INLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92
Query: 288 CLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY--- 344
GG + + + + +F++ V A D+LH++ I +RDLKPEN+L
Sbjct: 93 MRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 345 VKLVDFGFAKKL 356
VK+ DF +
Sbjct: 153 VKICDFDLGSGI 164
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 104 bits (261), Expect = 1e-25
Identities = 29/123 (23%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
+R++ ++ I E I+ + ++ L+ ++++ + +++E GGEL+ L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
K + + + +++ +YLH++ I + DLKPEN++L ++KL+DFG A
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 354 KKL 356
++
Sbjct: 167 HEI 169
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 104 bits (262), Expect = 2e-25
Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
R++ ++ I E I+ + I+ L+ ++++ + +++E GGEL+ L
Sbjct: 48 RQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLA 107
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFAK 354
K + + + +++ +YLH++ I + DLKPEN++L ++KL+DFG A
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 355 KL 356
++
Sbjct: 168 EI 169
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide
binding domain, evolution, PKA signaling, transfer; HET:
CMP; 2.21A {Saccharomyces cerevisiae}
Length = 246
Score = 101 bits (254), Expect = 2e-25
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
+ Y+ G+ IIR+G +G+ F++I G V V+ K + I L D+
Sbjct: 141 RAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKK-----GQGVINKLKDHDY 195
Query: 82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
FGE AL D R A + A + + F +L+ ++
Sbjct: 196 FGEVALLNDLPRQATVTATKR--TKVATLGKSGFQRLLGPAVDV 237
Score = 92.6 bits (230), Expect = 6e-22
Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 35/216 (16%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+G II+QG +GD F+++ KG V + + + G FGE AL + R
Sbjct: 35 VPKGATIIKQGDQGDYFYVVEKGTVDFY------VNDNKVNSSGPGSSFGELALMYNSPR 88
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRV 153
A +VA +D+ TF +++ + D+ + + +SL D
Sbjct: 89 AATVVATSD--CLLWALDRLTFRKILLGSSFKKRLMYDDLLKSMPV---LKSLTTYDRAK 143
Query: 154 ITT-LGVGGFGRVELVQIAGDPSRSF--------ALKQMKKSQVMNL------------- 191
+ L + E + GD +F + + + + L
Sbjct: 144 LADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLN 203
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 227
D R A + A + + F +L+ ++
Sbjct: 204 DLPRQATVTATKR--TKVATLGKSGFQRLLGPAVDV 237
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 102 bits (256), Expect = 4e-25
Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 61/229 (26%)
Query: 132 ETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNL 191
+ ++ L + L++ R+ +G G F V D ALK+++ +M+
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLD-GVPVALKKVQIFDLMDA 73
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
+E L+ L+
Sbjct: 74 KARADCI---------------KEI--DLLKQLN-------------------------- 90
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----RDKGNFDDAT 307
H ++K Y +F + L +++E G+L ++ + K + T
Sbjct: 91 H-------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT 137
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y + A +++HSR +++RD+KP N+ ++ +G VKL D G +
Sbjct: 138 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 103 bits (258), Expect = 4e-25
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 232 VDETSERRRAPQIVETRQQQH-IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
+ +++ A ++++ + + +E ++ + I+KL + F+ + +++E G
Sbjct: 73 KQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132
Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKL 347
GEL+ + +KG + + ++EA YLH I++RDLKPENLL +T +K+
Sbjct: 133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI 192
Query: 348 VDFGFAKKL 356
DFG +K +
Sbjct: 193 ADFGLSKIV 201
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 105 bits (263), Expect = 5e-25
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKG 301
+ ++ E +IM + N +V + + L + ME C GG+L L
Sbjct: 54 KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE 113
Query: 302 N---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKK 355
N + R + + A YLH II+RDLKPEN++L K++D G+AK+
Sbjct: 114 NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173
Query: 356 L 356
L
Sbjct: 174 L 174
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 102 bits (257), Expect = 5e-25
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLG 290
+ + + A +I++ ++ E EI+ I+ L + D KY+Y++ E G
Sbjct: 42 IHKATNMEFAVKIIDKSKRD-PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100
Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVK 346
GEL + + F + + + +YLH++ +++RDLKP N+L ++
Sbjct: 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR 160
Query: 347 LVDFGFAKKL 356
+ DFGFAK+L
Sbjct: 161 ICDFGFAKQL 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 101 bits (254), Expect = 6e-25
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
+RR ++ I E I+ E I+ L+ F++K + +++E GGEL+ L
Sbjct: 40 KRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
+K + + + +++ YLHS+ I + DLKPEN++L + +KL+DFG A
Sbjct: 100 AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Query: 354 KKL 356
K+
Sbjct: 160 HKI 162
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 101 bits (254), Expect = 6e-25
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
V + + RRA + + E EIM + I++LY+TF+D +Y++ME C
Sbjct: 29 VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---V 345
GGEL+ + K F ++ V+ A Y H N+ +RDLKPEN L T +
Sbjct: 89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 148
Query: 346 KLVDFGFAKK 355
KL+DFG A +
Sbjct: 149 KLIDFGLAAR 158
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB
tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A
{Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Length = 416
Score = 103 bits (258), Expect = 7e-25
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE-----EKYIRTL 76
L +V Y +G+ II QG D+FFI+ G+VK+TMK+ +E I
Sbjct: 283 RLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARC 342
Query: 77 YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
++G +FGE AL + R A+ A V CL +D + F +L+ EI + + E+
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQ 400
Query: 137 RR 138
Sbjct: 401 LV 402
Score = 100 bits (251), Expect = 7e-24
Identities = 50/241 (20%), Positives = 92/241 (38%), Gaps = 41/241 (17%)
Query: 33 FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
KEG+++I QG GD F++I +G + +K + + FGE AL +
Sbjct: 172 LVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDG--VGRCVGNYDNRGSFGELALMYNTP 229
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLR 152
+ A I A P + +D+ TF ++I + + K + E +SL +S+
Sbjct: 230 KAATITATSP--GALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPF---LKSLEVSERL 284
Query: 153 -VITTLGVGGFGRVELVQIAGDPSRSF------------------ALKQMKKSQVMNL-- 191
V+ +G + E + GD + SF +++ ++
Sbjct: 285 KVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFR 344
Query: 192 -----------DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
+ R A+ A V CL +D + F +L+ EI + + E+
Sbjct: 345 GQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLV 402
Query: 241 A 241
A
Sbjct: 403 A 403
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 102 bits (257), Expect = 7e-25
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 238 RRRAPQIVETRQQQHIMSEKEIM----GEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL 293
R ++ E I+ G + I+ L +++ +++++ + GEL
Sbjct: 131 AERLSPEQLEEVREATRRETHILRQVAGHPH---IITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 294 WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ L +K + TR ++EA +LH+ NI++RDLKPEN+LL + ++L DFGF+
Sbjct: 188 FDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
Query: 354 KKL 356
L
Sbjct: 248 CHL 250
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 103 bits (258), Expect = 1e-24
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 232 VDETSERRRAPQIVETRQ-----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V + + A I+ T++ Q + E I IV+L+ + ++ + Y++ +
Sbjct: 31 VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-- 344
GGEL+ + + + +A ++EA + H +++R+LKPENLLL++
Sbjct: 91 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 345 -VKLVDFGFAKKLIGP 359
VKL DFG A ++ G
Sbjct: 151 AVKLADFGLAIEVEGE 166
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 100 bits (252), Expect = 1e-24
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ R Q + E I + IV+L+ + +++ + Y++ + GGEL+ + + +
Sbjct: 44 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 103
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL 356
+A ++E+ Y HS I++R+LKPENLLL++ VKL DFG A ++
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 100 bits (252), Expect = 2e-24
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF----IVKLYKTFKDKKYLYMLM 285
K + R R E ++ + +++L F+ ++ +++
Sbjct: 62 KVIP----RNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVL 117
Query: 286 E-SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SG 343
E +L+ + +KG + +R + VV A + HSR +++RD+K EN+L+ G
Sbjct: 118 ERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG 177
Query: 344 YVKLVDFGFA 353
KL+DFG
Sbjct: 178 CAKLIDFGSG 187
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 100 bits (252), Expect = 2e-24
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
+RR ++ I E I+ E ++ L++ +++K + +++E GGEL+ L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
+K + + + ++ YLHS I + DLKPEN++L +K++DFG A
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 354 KKL 356
K+
Sbjct: 166 HKI 168
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 103 bits (258), Expect = 2e-24
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
+ + A + V T ++ + E + M +V L+ F+D + M+ E
Sbjct: 177 TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236
Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
GGEL+ + + + Y V + ++H N ++ DLKPEN++ +T S +
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296
Query: 346 KLVDFGFAKKL 356
KL+DFG L
Sbjct: 297 KLIDFGLTAHL 307
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 101 bits (253), Expect = 3e-24
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 232 VDETSERRRAPQIVETRQ-----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
V +T+ A +I+ T++ Q + E I + IV+L+ + +++ + Y++ +
Sbjct: 49 VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
GGEL+ + + + +A ++E+ Y HS I++R+LKPENLLL++
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 344 YVKLVDFGFAKKL 356
VKL DFG A ++
Sbjct: 169 AVKLADFGLAIEV 181
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 100 bits (251), Expect = 3e-24
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES-C 288
K++ + E+ +E + + E I+ I+K+ F+++ + ++ME
Sbjct: 55 KFIKK--EKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHG 112
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
G +L+ + D+ + +V A YL ++II+RD+K EN++++ +KL+
Sbjct: 113 SGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI 172
Query: 349 DFGFA 353
DFG A
Sbjct: 173 DFGSA 177
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 99.2 bits (248), Expect = 6e-24
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
+ + A + ++ + +E ++ + + IV L ++ + Y++M+
Sbjct: 29 KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YV 345
GGEL+ + ++G + + V+ A YLH I++RDLKPENLL T +
Sbjct: 89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKI 148
Query: 346 KLVDFGFAK 354
+ DFG +K
Sbjct: 149 MITDFGLSK 157
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 100 bits (250), Expect = 6e-24
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--- 302
+ + E I IV+L +T+ LYM+ E G +L + + +
Sbjct: 66 PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF 125
Query: 303 -FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
+ +A Y ++EA Y H NII+RD+KP +LL++ S VKL FG A +L
Sbjct: 126 VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185
Query: 359 P 359
Sbjct: 186 S 186
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit,
CAMP-dependent protein kinase catalytic subunit alpha;
PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus
norvegicus} PDB: 3idc_B*
Length = 161
Score = 95.5 bits (238), Expect = 7e-24
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 13 FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY 72
F +L + + ++ + KEG+++I QG GD F++I +G + +K +
Sbjct: 46 FKNL-DPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDG--VGRC 102
Query: 73 IRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE 132
+ FGE AL + R A I A P + +D+ TF ++I
Sbjct: 103 VGNYDNRGSFGELALMYNTPRAATITATSP--GALWGLDRVTFRRIIV----------KN 150
Query: 133 TSERRRLNEEF 143
+++R++ E F
Sbjct: 151 NAKKRKMYESF 161
Score = 31.6 bits (72), Expect = 0.21
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 195 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 230
R A I A P + +D+ TF ++I + + K
Sbjct: 123 RAATITATSP--GALWGLDRVTFRRIIVKNNAKKRK 156
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 100 bits (250), Expect = 8e-24
Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
+ + + A +I++TR ++ + +E +M + + +++LY F+ K + ++ME
Sbjct: 109 EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168
Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
GGEL+ I+ + N + T + + E ++H I++ DLKPEN+L + +
Sbjct: 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI 228
Query: 346 KLVDFGFAKKL 356
K++DFG A++
Sbjct: 229 KIIDFGLARRY 239
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ
domain containing guanine nucleotide exchange factor 2,
PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Length = 134
Score = 94.4 bits (235), Expect = 8e-24
Identities = 13/94 (13%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
+ + G I+ G D++++I G V+++ + + L+ G+ FG
Sbjct: 42 EVVEQAGAIILEDGQELDSWYVILNGTVEIS------HPDGKVENLFMGNSFGITPTLDK 95
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE 124
+ + + I Q+ + ++++ +++
Sbjct: 96 QYMHGIVRTKV-DDCQFVCIAQQDYWRILNHVEK 128
Score = 33.9 bits (78), Expect = 0.026
Identities = 2/35 (5%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE 226
+ + + I Q+ + ++++ +++
Sbjct: 95 KQYMHGIVRTKV-DDCQFVCIAQQDYWRILNHVEK 128
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 101 bits (253), Expect = 8e-24
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
V T ++ E ++ + I+KLY F+DK+ Y++ME GGEL+ + + F+
Sbjct: 75 VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN 134
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKK 355
+ V+ YLH NI++RDLKPENLLL + +K+VDFG +
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 100 bits (250), Expect = 9e-24
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 232 VDETSERRRAPQIVETR---QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
V++ + R + + T + + +E IM + + ++ L+ F+DK + +++E
Sbjct: 71 VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
GGEL+ I + +A Y E ++H +I++ D+KPEN++ T + V
Sbjct: 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSV 190
Query: 346 KLVDFGFAKKL 356
K++DFG A KL
Sbjct: 191 KIIDFGLATKL 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 98.5 bits (246), Expect = 9e-24
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF--DDAT 307
Q + E + IV+ +F + ++ + ME GG L +LR K G ++ T
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
FYT ++E YLH I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2,
CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus
musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Length = 469
Score = 100 bits (250), Expect = 1e-23
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 12 YFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK 71
HL ++ K G + QG G +++II KG V V + +
Sbjct: 344 ALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KG 398
Query: 72 YIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD 131
+ TL++GD FG+ AL D R A+IV + + L +D+E FN+++ ++ + +
Sbjct: 399 VVCTLHEGDDFGKLALVNDAPRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKE 457
Query: 132 ETSERRRLNE 141
+ L +
Sbjct: 458 HDQDVLVLEK 467
Score = 78.8 bits (193), Expect = 3e-16
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNS-TEEKYIRTLYKGDFFGEKALQGDDL 92
++G + RQG G ++ + G + V + + +S + I TL G FGE ++ +
Sbjct: 70 LEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE-SILDNTP 128
Query: 93 RTANIVAADPEGVSCLVIDQETFNQ 117
R A IV + L I+QE F
Sbjct: 129 RHATIVTRES--SELLRIEQEDFKA 151
Score = 39.5 bits (91), Expect = 0.001
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 153 VITTLGVGG-FGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
V+ TL G FG++ LV D R A+IV + + L
Sbjct: 399 VVCTLHEGDDFGKLALVN----------------------DAPRAASIVLRE-DNCHFLR 435
Query: 212 IDQETFNQLISSLDEIRTKYVDETSER 238
+D+E FN+++ ++ + + +
Sbjct: 436 VDKEDFNRILRDVEANTVRLKEHDQDV 462
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 98.5 bits (246), Expect = 1e-23
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
E ++ +E EI+ + N I+K+ F + Y Y+++E GGEL+ + +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKE 113
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
AT + Y ++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 100 bits (251), Expect = 2e-23
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 50/204 (24%)
Query: 156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQE 215
LG G +G V L + A+K +KKSQ + E +
Sbjct: 43 KLGSGAYGEVLLCKEKNG-HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI-------- 93
Query: 216 TFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF 275
+EI ++ + N I+KL+ F
Sbjct: 94 --------YNEIS------------------------LLKS---LDHPN---IIKLFDVF 115
Query: 276 KDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
+DKKY Y++ E GGEL+ + ++ FD+ ++ YLH NI++RD+KPE
Sbjct: 116 EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175
Query: 336 NLLLSTSGY---VKLVDFGFAKKL 356
N+LL +K+VDFG +
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFF 199
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 98.1 bits (245), Expect = 2e-23
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 232 VDETSERRRAPQIVETRQQQH--IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
V+ +S++ + V+ + + E I+ A I+ L+++F+ + L M+ E
Sbjct: 25 VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84
Query: 290 GGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVK 346
G +++ I ++ Y V EA +LHS NI + D++PEN++ T S +K
Sbjct: 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144
Query: 347 LVDFGFAKKL 356
+++FG A++L
Sbjct: 145 IIEFGQARQL 154
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 97.7 bits (244), Expect = 2e-23
Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 35/199 (17%)
Query: 156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQE 215
+G G +G V+L D + +A+K + K +++ + +
Sbjct: 20 EIGKGSYGVVKLAYNEND-NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 216 TFNQLISSLDEIRT-KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKT 274
Q+ EI K +D +++ E++ + N
Sbjct: 79 PIEQVYQ---EIAILKKLD----------------HPNVVKLVEVLDDPN---------- 109
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
+ +LYM+ E G + + + RFY +++ +YLH + II+RD+KP
Sbjct: 110 ---EDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP 165
Query: 335 ENLLLSTSGYVKLVDFGFA 353
NLL+ G++K+ DFG +
Sbjct: 166 SNLLVGEDGHIKIADFGVS 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 99.8 bits (249), Expect = 3e-23
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ + I+ E E++ + + I+KL++ +D Y++ E GGEL+ + + F
Sbjct: 60 AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKK 355
+ V Y+H NI++RDLKPEN+LL + +K++DFG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 99.4 bits (248), Expect = 4e-23
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 232 VDETSERRRAPQIVETRQ------QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
D+ + + A +++ RQ ++ ++ E +++ + + I+KLY+ F+DK Y Y++
Sbjct: 46 KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-- 343
E GGEL+ + + F + V+ Y+H I++RDLKPENLLL +
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 165
Query: 344 -YVKLVDFGFAKK 355
++++DFG +
Sbjct: 166 ANIRIIDFGLSTH 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 97.3 bits (243), Expect = 4e-23
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 247 TRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGEL--WTILRDKGNF 303
+ I+ E ++ A C ++ L++ +++ + +++E GGE+ +
Sbjct: 69 QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMV 128
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
+ ++E YLH NI++ DLKP+N+LLS+ G +K+VDFG ++K+
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 98.6 bits (246), Expect = 4e-23
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
E ++ +E EI+ + N I+K+ F + Y Y+++E GGEL+ + +
Sbjct: 180 EADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKE 238
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
AT + Y ++ A YLH II+RDLKPEN+LLS+ +K+ DFG +K L
Sbjct: 239 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 97.6 bits (243), Expect = 4e-23
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
+ I+ E +++ E N +IV Y F + + ME GG L +L+ G +
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134
Query: 310 FYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ V++ YL I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 96.1 bits (240), Expect = 5e-23
Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFD 304
+ I +E E++ + I+K+++ F+D +Y++ME+C GGEL +
Sbjct: 63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKK 355
+ ++ A Y HS++++++DLKPEN+L + +K++DFG A+
Sbjct: 123 EGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 98.2 bits (244), Expect = 6e-23
Identities = 29/255 (11%), Positives = 70/255 (27%), Gaps = 41/255 (16%)
Query: 110 IDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ 169
+ T + S+ D + + + T + R+ E R L T LG
Sbjct: 40 NVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGE-RPRTLVRGTVLGQEDPYAYLEAT 98
Query: 170 IAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT 229
SF + ++ + ++ + +E
Sbjct: 99 DQET-GESFEVHVPYFTERPPSNAIK---------------QMKEEVL------------ 130
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLM 285
R + + + +++ + ++++ +D ++
Sbjct: 131 ----RLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPR 186
Query: 286 ESC----LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
G L + + T V+ LH +++ L+P +++L
Sbjct: 187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQ 246
Query: 342 SGYVKLVDFGFAKKL 356
G V L F +
Sbjct: 247 RGGVFLTGFEHLVRD 261
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 97.0 bits (241), Expect = 1e-22
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 16/124 (12%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-----F 303
+ E + + +K Y + ++ E G L + N
Sbjct: 110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-----------SGYVKLVDFGF 352
+ ++ + +H II+ D+KP+N +L S + L+D G
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ 229
Query: 353 AKKL 356
+ +
Sbjct: 230 SIDM 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 95.0 bits (237), Expect = 1e-22
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+I I E + + I+KLY+ +M+ME GGEL+ + G
Sbjct: 48 KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
++ R ++ A DY H +++RDLKPEN+LL K+ DFG +
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 96.7 bits (240), Expect = 1e-22
Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 44/238 (18%)
Query: 130 VDETSERRRLNEEFRSL---RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS 186
V T + SL L+++ L VG V LV+ + FALK
Sbjct: 40 VTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMG 98
Query: 187 QVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVE 246
+ +L + + TF R E
Sbjct: 99 AENSRSELER---------------LHEATFAAA-----------------RLLGESPEE 126
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY--LYMLMESC------LGGELWTILR 298
R ++ ++ + + + +L D +LM + L L +
Sbjct: 127 ARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYV 186
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+G+ TA ++ L S+ +++ P+NL + G + L D K+
Sbjct: 187 FRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 95.1 bits (237), Expect = 2e-22
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 256 EKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATT 308
E E+ + C IV++ +++ +K L ++ME GGEL++ ++D+G+ F +
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLIGPRYS 362
+ EA YLHS NI +RD+KPENLL ++ +KL DFGFAK+ G +Y
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYD 176
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 95.8 bits (239), Expect = 2e-22
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q + E IM N IVKL++ + +K LY++ME GGE++ L G + R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+V A Y H + I++RDLK ENLLL +K+ DFGF+
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 95.1 bits (237), Expect = 2e-22
Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF--IVKLYKTFKDKKYLYMLMES 287
K+V+ + R E + E ++ + + F +++L F+ +++E
Sbjct: 74 KHVE----KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 129
Query: 288 CLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYV 345
+L+ + ++G + R + V+EA + H+ +++RD+K EN+L+ G +
Sbjct: 130 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 189
Query: 346 KLVDFGFA 353
KL+DFG
Sbjct: 190 KLIDFGSG 197
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 93.9 bits (234), Expect = 3e-22
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTIL----RDKG 301
++Q ++SE ++ E IV+ Y D+ LY++ME C GG+L +++ +++
Sbjct: 47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ 106
Query: 302 NFDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D+ + A H R+ +++RDLKP N+ L VKL DFG A+ L
Sbjct: 107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 94.0 bits (234), Expect = 5e-22
Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTIL----RDK 300
++ E ++ N I++L ++ ++L+ G LW +
Sbjct: 69 DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG 128
Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + + +H++ +RDLKP N+LL G L+D G +
Sbjct: 129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 93.1 bits (232), Expect = 6e-22
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 18/126 (14%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKD----------------KKYLYMLMESCLGGE 292
+ E + + + + IV + K L++ ME C G
Sbjct: 47 NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106
Query: 293 LWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
L + + D + + DY+HS+ +I RDLKP N+ L + VK+ DF
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF 166
Query: 351 GFAKKL 356
G L
Sbjct: 167 GLVTSL 172
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 93.6 bits (233), Expect = 9e-22
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMG-EANCDFIVKLYKTFKD----KKYLYMLME 286
+ ++ A +++ + E + + IV + +++ K+ L ++ME
Sbjct: 49 FHRRTGQKCALKLLYDSPK--ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106
Query: 287 SCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
GGEL++ ++++G+ F + + A +LHS NI +RD+KPENLL ++
Sbjct: 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK 166
Query: 345 ---VKLVDFGFAKKL 356
+KL DFGFAK+
Sbjct: 167 DAVLKLTDFGFAKET 181
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 92.0 bits (229), Expect = 2e-21
Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 74/224 (33%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
L+D I LG GGFG V + D ++A+K+++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVD-DCNYAIKRIRLP--------------------- 41
Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
+ R + M E + + +
Sbjct: 42 -------------------------NRELAREKV------------MREVKALAKLEHPG 64
Query: 268 IVKLYKTFKDK------------KYLYMLMESCLGGELWTILRDKGN---FDDATTRFYT 312
IV+ + + +K YLY+ M+ C L + + + +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ EA ++LHS+ +++RDLKP N+ + VK+ DFG +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 91.1 bits (227), Expect = 3e-21
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+VK Y ++ Y+ +E C GGEL+ + + + + ++ YLH I
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
+RD+KPENLLL +K+ DFG A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 91.2 bits (227), Expect = 4e-21
Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR 309
+ + E EI+ + +IVKL + L++++E C GG + I+ + + +
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ 120
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++EA ++LHS+ II+RDLK N+L++ G ++L DFG + K
Sbjct: 121 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 90.7 bits (226), Expect = 5e-21
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ ++ Q I E + I+KLY K K + M++E G EL+ + +
Sbjct: 50 VLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDK 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ R + ++ A +Y H I++RDLKPENLLL VK+ DFG +
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 91.2 bits (227), Expect = 5e-21
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+VK Y ++ Y+ +E C GGEL+ + + + + ++ YLH I
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
+RD+KPENLLL +K+ DFG A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLAT 153
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit;
beta-barrel, CAMP-binding, catalytic subunit,
transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B*
3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Length = 154
Score = 87.4 bits (217), Expect = 5e-21
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ G+ +I+QG GD F++I +G++ V + ++ ++ +G FGE AL R
Sbjct: 66 FIAGETVIQQGDEGDNFYVIDQGEMDVYV------NNEWATSVGEGGSFGELALIYGTPR 119
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 129
A + A V ID++++ +++ R Y
Sbjct: 120 AATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRKMY 154
Score = 30.4 bits (69), Expect = 0.42
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 195 RTANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 231
R A + A V ID++++ +++ R Y
Sbjct: 119 RAATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRKMY 154
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 91.7 bits (228), Expect = 6e-21
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV+ + +L ++ME GGEL+ + + G F + RF+ ++ Y HS I
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAK 354
+RDLK EN LL S + +K+ DFG++K
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 92.5 bits (230), Expect = 6e-21
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+I I E + + I+KLY+ ++M+ME GGEL+ + G
Sbjct: 53 KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR 112
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
D+ +R ++ DY H +++RDLKPEN+LL K+ DFG +
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 91.2 bits (227), Expect = 7e-21
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ ++ + E + I+KLY + M++E GGEL+ + +K
Sbjct: 46 LLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ R + ++ A +Y H I++RDLKPENLLL + VK+ DFG +
Sbjct: 105 MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 92.2 bits (229), Expect = 8e-21
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESC 288
+ R A + + + E +++ E + +++ Y + ++LY+ +E C
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 289 LGGELWTILRDKGNFDDATTRFYTAC-------VVEAFDYLHSRNIIYRDLKPENLLLST 341
L ++ K D+ + +LHS II+RDLKP+N+L+ST
Sbjct: 92 -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
Query: 342 SGY-------------VKLVDFGFAKKLIGPRYS 362
S + + DFG KKL + S
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 90.5 bits (225), Expect = 9e-21
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 250 QQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
+ I+ + ++ + +C +IV+ + TF +++ ME R +G +
Sbjct: 67 NKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERIL 126
Query: 309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
T +V+A YL +I+RD+KP N+LL G +KL DFG + +L+
Sbjct: 127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 91.7 bits (228), Expect = 9e-21
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLME 286
++ ++ + A ++++ + E E+ + C IV++ +++ +K L ++ME
Sbjct: 82 FNKRTQEKFALKMLQDCPK--ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139
Query: 287 SCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
GGEL++ ++D+G+ F + + EA YLHS NI +RD+KPENLL ++
Sbjct: 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199
Query: 345 ---VKLVDFGFAKKL 356
+KL DFGFAK+
Sbjct: 200 NAILKLTDFGFAKET 214
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 90.5 bits (225), Expect = 1e-20
Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+ +E IM + +V++YK++ + L++LME GG L I+ + ++
Sbjct: 89 LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVC 147
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V++A YLH++ +I+RD+K +++LL+ G VKL DFGF ++
Sbjct: 148 EAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural
genomics, joint center for structural genomics; HET:
MSE; 1.90A {Geobacter metallireducens}
Length = 142
Score = 86.2 bits (214), Expect = 1e-20
Identities = 22/144 (15%), Positives = 54/144 (37%), Gaps = 7/144 (4%)
Query: 1 MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKV 60
M L++ +F L + I S + + G I ++ ++ D ++ +G V++
Sbjct: 2 MISPERLRVYRFFASL-TDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVEL 60
Query: 61 TMKQPNSTE--EKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQL 118
+ + ++ G FG +L T++ A P V + I+ ++
Sbjct: 61 FYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKP--VRVVDINGARLREM 118
Query: 119 ISSLDEIRTKYVDETSER--RRLN 140
+ + ++ + RL+
Sbjct: 119 SENNQALGQVLMNNVAAAVLARLH 142
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase;
HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Length = 139
Score = 85.4 bits (212), Expect = 2e-20
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Query: 13 FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY 72
+L I IV Y + II++G G +++ GKV+VT E
Sbjct: 31 MKNL-ELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT------KEGVK 83
Query: 73 IRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 129
+ T+ G FGE A+ + RTA + V ID++ F ++ I T+Y
Sbjct: 84 LCTMGPGKVFGELAILYNCTRTATVKTLVN--VKLWAIDRQCFQTIMMRTGLIKHTEY 139
Score = 31.9 bits (73), Expect = 0.12
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 195 RTANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 231
RTA + V ID++ F ++ I T+Y
Sbjct: 104 RTATVKTLVN--VKLWAIDRQCFQTIMMRTGLIKHTEY 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 89.3 bits (222), Expect = 2e-20
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
+ I E ++ + + ++ K Y ++ L+++ME GG +L G D+
Sbjct: 65 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIAT 123
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+++ DYLHS I+RD+K N+LLS G VKL DFG A +L
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces
coelicolor structural genomics, PSI-2, protein structure
initiative; 2.00A {Streptomyces coelicolor A3}
Length = 149
Score = 85.8 bits (213), Expect = 2e-20
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
GD + +G GD +++++GKVK+ P+ E + + + GE +L R
Sbjct: 33 LARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDG-RENMLAVVGPSELIGELSLFDPGPR 91
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
TA A V L + ++ E+ T + + R R+ N+ L SD
Sbjct: 92 TATGTALTE--VKLLALGHGDLQPWLNVRPEVATALLRAVARRLRKTNDAMSDLVFSD 147
Score = 26.8 bits (60), Expect = 7.6
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 163 GRVELVQIAGDPSRSFALKQMKKSQV---MNL--DDLRTANIVAADPEGVSCLVIDQETF 217
G+V+L + + D R L + S++ ++L RTA A V L +
Sbjct: 55 GKVKLHRTSPD-GRENMLAVVGPSELIGELSLFDPGPRTATGTALTE--VKLLALGHGDL 111
Query: 218 NQLISSLDEIRTKYVDETSER-RRAPQIVET 247
++ E+ T + + R R+ +
Sbjct: 112 QPWLNVRPEVATALLRAVARRLRKTNDAMSD 142
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 91.0 bits (226), Expect = 2e-20
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCL 289
Y R A + + E +++ E++ +++ + T KD+++ Y+ +E C
Sbjct: 42 YRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC- 100
Query: 290 GGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---- 344
L + K +LHS NI++RDLKP N+L+S
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160
Query: 345 -VKLVDFGFAKKLIGPRYS 362
+ DFG KKL R+S
Sbjct: 161 KAMISDFGLCKKLAVGRHS 179
Score = 27.8 bits (62), Expect = 6.2
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 133 TSERRRLNEEFRSLRLSDLRVIT--TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMN 190
+ E+ +EE + + + LG G G + + + R A+K++
Sbjct: 6 SLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDN--RDVAVKRILPECFSF 63
Query: 191 LD 192
D
Sbjct: 64 AD 65
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 89.3 bits (222), Expect = 2e-20
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
I++E +M E IV ++ L+++ME GG L ++ + D+
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVC 122
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++A ++LHS +I+RD+K +N+LL G VKL DFGF ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 88.6 bits (220), Expect = 5e-20
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDAT 307
Q I+ E IM + + +VK Y ++ L+++ME C G + I+R + +
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDE 126
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
++ +YLH I+RD+K N+LL+T G+ KL DFG A +L
Sbjct: 127 IATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 88.7 bits (220), Expect = 5e-20
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 42/161 (26%)
Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
+ + + + + I +E +M + + I +LY+ ++D++Y+ ++ME C GG L L
Sbjct: 60 NKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119
Query: 298 RDKGNFDDATTRFYTAC----------------------------------------VVE 317
+ +
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179
Query: 318 AFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
A YLH++ I +RD+KPEN L ST S +KLVDFG +K+
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 86.9 bits (216), Expect = 1e-19
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 245 VETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGG---ELWTILRDK 300
V +++Q+ ++ + +I M +C F V Y + +++ ME ++
Sbjct: 44 VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG 103
Query: 301 GNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ +V+A ++LHS ++I+RD+KP N+L++ G VK+ DFG + L+
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 86.6 bits (215), Expect = 2e-19
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 250 QQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGNF 303
Q+ ++ + ++ M ++C +IV+ Y + ++ ME +
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVI 122
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ T V+A ++L II+RD+KP N+LL SG +KL DFG + +L+
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 86.3 bits (214), Expect = 4e-19
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
Q I+ E + + ++ + + +++ME CLG + K +
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 158
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
T ++ YLHS N+I+RD+K N+LLS G VKL DFG A +
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 85.9 bits (213), Expect = 5e-19
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 245 VETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGG---ELWTILRDK 300
V +++Q+ ++ + +I M +C F V Y + +++ ME ++
Sbjct: 88 VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG 147
Query: 301 GNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
+ +V+A ++LHS ++I+RD+KP N+L++ G VK+ DFG + L+
Sbjct: 148 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 85.1 bits (211), Expect = 6e-19
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK----TFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
++Q E E++ IV+ Y T K KK + ++ E G L T L+
Sbjct: 68 ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK 127
Query: 305 DATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
R + +++ +LH+R II+RDLK +N+ ++ +G VK+ D G A
Sbjct: 128 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 83.9 bits (208), Expect = 2e-18
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
++ E + M + + IV Y +F K L+++M+ GG + I++ + +
Sbjct: 58 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 311 ----YTACVV----EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A ++ E +YLH I+RD+K N+LL G V++ DFG + L
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 83.1 bits (206), Expect = 3e-18
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 268 IVKLYK--TFKDKKYLYMLMESCLGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
+++L ++K+ +YM+ME C+ G E+ + + F Y +++ +YLH
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH 126
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
S+ I+++D+KP NLLL+T G +K+ G A
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide
monophosphate, CNMP, CNMP-binding, structural genomics;
NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Length = 137
Score = 79.1 bits (195), Expect = 4e-18
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 11/99 (11%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL--- 87
+ E Y++R+G + I +G+++ + L +GDF G++ L
Sbjct: 31 PCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWA 90
Query: 88 ------QGDDLRTANIVAADPEGVSCLVIDQETFNQLIS 120
T + A V + + + S
Sbjct: 91 LDPKSGSNLPSSTRTVKALTE--VEAFALIADELKFVAS 127
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 83.4 bits (206), Expect = 5e-18
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDATT 308
+ E + N IV TF L+++ G ++ ++
Sbjct: 71 TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAI 130
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
+ V++A DY+H ++R +K ++L+S G V L +I
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180
>2z69_A DNR protein; beta barrel, dimerization helix, transcription
regulator; 2.10A {Pseudomonas aeruginosa}
Length = 154
Score = 78.9 bits (195), Expect = 7e-18
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
+G Y+ RQG F+ + G VK+ P +EK + + + F E +
Sbjct: 40 LDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAEAMMFMDTPN 98
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL 148
A A P + + + + + + + S R + +E +L L
Sbjct: 99 YVATAQAVVP--SQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSL 153
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 81.5 bits (202), Expect = 1e-17
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
+V L + F+ K+ L+++ E + L + + T ++A ++ H N
Sbjct: 64 LVNLLEVFRRKRRLHLVFE-YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
I+RD+KPEN+L++ +KL DFGFA+ L GP
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 80.8 bits (200), Expect = 2e-17
Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 31/145 (21%)
Query: 248 RQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----RDKGN 302
+Q+ + E +V+ + + + ++ + E C GG L + R
Sbjct: 52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG------------------- 343
F +A + V Y+HS ++++ D+KP N+ +S +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 344 YVKLVDFGFAKKL------IG-PRY 361
K+ D G ++ G R+
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRF 196
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 81.1 bits (201), Expect = 2e-17
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
+V L + K KK Y++ E + + L N D + Y ++ + HS N
Sbjct: 86 LVNLLEVCKKKKRWYLVFE-FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
II+RD+KPEN+L+S SG VKL DFGFA+ L P
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP),
dimer, inactive(APO, unliganded allostery, DNA binding,
cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB:
3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Length = 227
Score = 79.2 bits (196), Expect = 2e-17
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 19/178 (10%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ G + +G GD +II GKVK+ + P+ E + + D FGE ++ R
Sbjct: 34 FPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFGELSIFDPGPR 92
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
T++ V + +D++ I+ EI + + + R RR N L +D+
Sbjct: 93 TSSATTITE--VRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVP 150
Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
RV L ++L Q G +Q +++ A +V A E V+
Sbjct: 151 GRVAKQL-------LQLAQRFGTQEGGALRVTHDLTQ----EEI--AQLVGASRETVN 195
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged
helix-turn-helix motif, DNA binding, transcription
activator; HET: CMP; 2.40A {Thermus thermophilus}
Length = 216
Score = 78.4 bits (194), Expect = 3e-17
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
Y +G I QG G ++++ GKV++ +E+ + L G+ FGE +L + R
Sbjct: 27 YPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFGEMSLLDEGER 85
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
+A+ VA + L + +E + LI L + + R R + E L +
Sbjct: 86 SASAVAVED--TELLALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEAR 143
Query: 152 -RVITTL 157
RV L
Sbjct: 144 NRVAYAL 150
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat
transcription; HET: PR3; 2.3A {Listeria monocytogenes}
SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Length = 238
Score = 78.9 bits (195), Expect = 4e-17
Identities = 13/127 (10%), Positives = 34/127 (26%), Gaps = 4/127 (3%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ + + I Q + + G K+T N ++ + +
Sbjct: 23 FHKKELIFNQWDPQEYCIFLYDGITKLTSISENG-TIMNLQYYKGAFVIMSGFIDTETSV 81
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
+ E + VI +L+S ++ +F ++
Sbjct: 82 GYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKL 141
Query: 152 -RVITTL 157
+ + L
Sbjct: 142 GSICSQL 148
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 79.8 bits (197), Expect = 6e-17
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLY-------KTFKDKKYLYMLMESCLGGELWTIL--- 297
+ + I+ E M + + IV+ + + ++L+ G+L L
Sbjct: 68 KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM 127
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+G T A ++H + II+RDLK ENLLLS G +KL DFG A
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
Query: 356 LIGP 359
+
Sbjct: 188 ISHY 191
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription,
transcription regulation; HET: BOG; 1.90A {Anabaena}
PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Length = 243
Score = 77.0 bits (190), Expect = 2e-16
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 21/180 (11%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL- 92
++ I G + + + KG VK++ EE + L + FG +L +
Sbjct: 48 FERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFGVLSLLTGNKS 106
Query: 93 -RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
R + VA P V L E Q + E+ + S R + +L D
Sbjct: 107 DRFYHAVAFTP--VELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRD 164
Query: 151 L--RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
+ R+++ L + L + G P +K S + A + + V+
Sbjct: 165 MGSRLVSFL-------LILCRDFGVPCADGITIDLKLSH----QAI--AEAIGSTRVTVT 211
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding,
DNA-binding nucleotide-binding, transcription,
transcription regulation; HET: CMP; 1.66A {Escherichia
coli}
Length = 260
Score = 77.4 bits (191), Expect = 2e-16
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
Y +I QG + +T + I KG V V +K +E + L +GDF GE L +
Sbjct: 74 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQE 132
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
R+A + A I + F QLI +I + + + R + +E+ +L +
Sbjct: 133 RSAWVRAKTA--CEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLV 190
Query: 152 --RVITTL 157
R+ TL
Sbjct: 191 TGRIAQTL 198
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural
genomics, joint center for structura genomics, JCSG;
2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4
b.82.3.2
Length = 232
Score = 76.5 bits (189), Expect = 2e-16
Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 26/179 (14%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+K G+ II+ G + KG++ + + I + ++L G +
Sbjct: 48 HKAGETIIKSGNPCTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLIEPQSLFGMNTN 106
Query: 94 -TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
++ VA V + I + + D R Y++ S R + L DL
Sbjct: 107 YASSYVAHTE--VHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDL 164
Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
++I + P K + +DDL A + +S
Sbjct: 165 KSKIIRF----------FLSHCEKPQGEKTFK-------VKMDDL--ARCLDDTRLNIS 204
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery,
DNA binding cyclic A transcription regulator; HET: CMP;
1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A*
3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A*
1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A*
3rdi_A* 3rou_A* 3rpq_A* ...
Length = 210
Score = 76.1 bits (188), Expect = 2e-16
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
Y +I QG + +T + I KG V V +K +E + L +GDF GE L +
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQE 82
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
R+A + A I + F QLI +I + + + R + +E+ +L D+
Sbjct: 83 RSAWVRAKTA--CEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDV 140
Query: 152 --RVITTL 157
R+ TL
Sbjct: 141 TGRIAQTL 148
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 78.2 bits (193), Expect = 2e-16
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 245 VETRQQQHIMSEKEIMGEA-NCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTIL 297
V +++ I E ++ + + I Y F L+++ME C G + ++
Sbjct: 59 VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118
Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ + + ++ +LH +I+RD+K +N+LL+ + VKLVDFG + +
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 356 L 356
L
Sbjct: 179 L 179
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix,
homodimer, transcription regulator; 3.60A {Pseudomonas
aeruginosa}
Length = 227
Score = 76.1 bits (188), Expect = 3e-16
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 23/179 (12%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
+G Y+ RQG F+ + G VK+ P +EK + + + F E +
Sbjct: 37 LDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAEAMMFMDTPN 95
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
A A P + + + + + + + S R + +E +L L +
Sbjct: 96 YVATAQAVVP--SQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNA 153
Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
RV+ L + L A + + + + A ++ PE S
Sbjct: 154 THRVVRYL-------LTLAAHAPGENCRVEIP-------VAKQLV--AGHLSIQPETFS 196
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration;
HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP:
a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A*
3e5q_A 2h6b_A* 2h6c_A
Length = 250
Score = 76.6 bits (189), Expect = 3e-16
Identities = 22/178 (12%), Positives = 51/178 (28%), Gaps = 22/178 (12%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ +G +I G + + +GK+K+ + + EK + G+ G
Sbjct: 37 FAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIGKLYPTG---N 92
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
A +P +++ + + +++ + + + + +
Sbjct: 93 NIYATAMEP--TRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPT 150
Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
R++ EL G M SQ + I VS
Sbjct: 151 IRILRLF-------YELCSSQGKRVGDTYEITMPLSQ----KSI--GEITGVHHVTVS 195
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP
regulatory protein, structural genomi 2, protein
structure initiative; 2.20A {Ruegeria pomeroyi} PDB:
3h3z_A*
Length = 237
Score = 76.2 bits (188), Expect = 3e-16
Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 23/178 (12%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
Y G+ + Q + ++ G VK+ P E + +G+ FGE +
Sbjct: 39 YDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESFGEAVALRNTPY 97
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
+ A P + I F L+ EI + T L + L+
Sbjct: 98 PVSAEAVTP--CEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGA 155
Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
RV L +EL L K + A + PE +S
Sbjct: 156 QRVAEFL-------LELCDCDTGACE-VTLP-YDKMLI--------AGRLGMKPESLS 196
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Length = 231
Score = 75.4 bits (186), Expect = 6e-16
Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
++ + ++ Q A G+ +++ G V+V+ E+ + +Y GE A+ R
Sbjct: 34 FQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGG-RERVLGDIYAPGVVGETAVLAHQER 92
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL-SDL 151
+A++ A P V L++ +E F ++ + + + R LN+E + ++
Sbjct: 93 SASVRALTP--VRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEA 150
Query: 152 RVITTL 157
+
Sbjct: 151 ALTHVF 156
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 75.3 bits (186), Expect = 1e-15
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
IV + ++ Y++ME G L + G T +T +++ + H I
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
++RD+KP+N+L+ ++ +K+ DFG AK
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAK 159
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics,
porphyromona gingivalis, PSI, protein structure
initiative; 1.90A {Porphyromonas gingivalis} SCOP:
a.4.5.4 b.82.3.2
Length = 232
Score = 74.2 bits (183), Expect = 1e-15
Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
K+ + +G + F + +GK+K+ + R + G FFG + ++
Sbjct: 38 CKKASTVFSEGDIPNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFFGMRPYFAEETC 96
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
++ +A + L I E L+ ++ ++ +L +
Sbjct: 97 SSTAIAVEN--SKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVR 154
Query: 152 -RVITTL 157
R+ TL
Sbjct: 155 GRLAETL 161
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix,
transcription factor, CAMP-B proteins, CAMP receptor
protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP:
a.4.5.4 b.82.3.2
Length = 207
Score = 73.4 bits (181), Expect = 2e-15
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL----QG 89
Y II G R +T F I KG V + ++ + E I L GDFFGE L
Sbjct: 18 YTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFGELGLFEKEGS 76
Query: 90 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL 148
+ R+A + A I F +L EI + ++R R+ + L
Sbjct: 77 EQERSAWVRAKVE--CEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAF 134
Query: 149 SDL--RVITTL 157
D+ RV TL
Sbjct: 135 LDVTGRVARTL 145
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 74.9 bits (185), Expect = 2e-15
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRN 326
IVKLY KK L ++ E L +L +L +G + T + + ++ Y H R
Sbjct: 62 IVKLYDVIHTKKRLVLVFE-HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+++RDLKP+NLL++ G +K+ DFG A+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 75.3 bits (186), Expect = 2e-15
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
IV L ++ L ++ E + +L +L + D+ + Y ++ + H
Sbjct: 81 IVSLIDVIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG,
PSI, protein structure initiative, joint center for S
genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Length = 213
Score = 72.6 bits (179), Expect = 4e-15
Identities = 27/183 (14%), Positives = 63/183 (34%), Gaps = 35/183 (19%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
+++G+ + Q + I+ +G +K N + I + + +
Sbjct: 27 FRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQIIASGFIFSSEPR 85
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
N+VA + L I +E F L+ E+ ++ + SE R ++E+ L L
Sbjct: 86 FPVNVVAGEN--SKILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTL 143
Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLD----DLRTANIVAADPE 205
+++ L ++ M + + + L +L + +
Sbjct: 144 REKLMNFL----------------------VRHMNEKRELTLPVTLEEL--SRLFGCARP 179
Query: 206 GVS 208
+S
Sbjct: 180 ALS 182
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 75.7 bits (186), Expect = 4e-15
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
IV+++ Y++ME G L K +A Y ++ A YL
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYL 198
Query: 323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
HS ++Y DLKPEN++L+ +KL+D G ++
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRI 231
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 74.2 bits (183), Expect = 5e-15
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
IV L+ +K L ++ E L +L L D GN + + + ++ Y H +
Sbjct: 62 IVTLHDIIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+++RDLKP+NLL++ G +KL DFG A+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR 148
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 73.9 bits (182), Expect = 5e-15
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
+ Q+ + E ++M ++K K L + E GG L I++ +
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 306 ATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
+ R A + YLHS NII+RDL N L+ + V + DFG A+ ++ +
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 73.8 bits (182), Expect = 6e-15
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+V ++ + LY+ M G +L +LR +G + A D H+
Sbjct: 96 VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
+RD+KPEN+L+S + LVDFG A
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS 182
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 73.3 bits (181), Expect = 6e-15
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
IV+L+ K L ++ E +L D + + +++ + HSRN
Sbjct: 63 IVRLHDVLHSDKKLTLVFE-FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+++RDLKP+NLL++ +G +KL +FG A+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR 149
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 73.8 bits (182), Expect = 7e-15
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
I+ L F K + ++ + + +L I++D + + Y ++ +YLH
Sbjct: 74 IIGLLDAFGHKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
I++RDLKP NLLL +G +KL DFG AK
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 73.3 bits (181), Expect = 7e-15
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
IVKL + LY++ E L +L + + Y +++ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+++RDLKP+NLL++T G +KL DFG A+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 72.8 bits (179), Expect = 1e-14
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRN 326
+V +L ++ C G L++++RD D A +V+ YLH++
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
I+++DLK +N+ +G V + DFG
Sbjct: 151 ILHKDLKSKNVFY-DNGKVVITDFGLFS 177
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 72.7 bits (179), Expect = 2e-14
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
I++L L+++ E +L + + + + ++ ++ HSR
Sbjct: 95 IIELKSVIHHNHRLHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 328 IYRDLKPENLLLSTS-----GYVKLVDFGFAK 354
++RDLKP+NLLLS S +K+ DFG A+
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA
transcription regulator, DNA binding protein; HET: HEM;
2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Length = 220
Score = 70.7 bits (174), Expect = 2e-14
Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 31/180 (17%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE--EKYIRTLYKGDFFGEKALQGDD 91
Y + + + F++ G+V+V + + E E + L GD F
Sbjct: 32 YSKKAILYTPNTERNLVFLVKSGRVRVYL----AYEDKEFTLAILEAGDIFCT------- 80
Query: 92 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
A I A + + L D F ++ V + + L D
Sbjct: 81 HTRAFIQAMED--TTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKD 138
Query: 151 L--RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
R+ L V+ G ++ + +++ A ++ + VS
Sbjct: 139 ARLRLAEFL-------VQAAMDTGLKVPQGIKLELGLNT----EEI--ALMLGTTRQTVS 185
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling;
HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB:
4avb_A* 4avc_A*
Length = 333
Score = 72.0 bits (176), Expect = 2e-14
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
++++ G ++RQG +F +IS G +V+ + I G
Sbjct: 29 LVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDD--GVAIIARALPGMI 86
Query: 82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQL 118
GE AL D R+A + +P ++ + F +
Sbjct: 87 VGEIALLRDSPRSATVTTIEP--LTGWTGGRGAFATM 121
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 71.6 bits (176), Expect = 3e-14
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLL 339
L ++ + C G L+ L + A DYLH+++II+RDLK N+ L
Sbjct: 94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
Query: 340 STSGYVKLVDFGFAK 354
VK+ DFG A
Sbjct: 154 HEDNTVKIGDFGLAT 168
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 71.5 bits (176), Expect = 4e-14
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 268 IVKLYKTFKDKKYLYMLMESC---LGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
IV+LY + L ++ E L + T+ + +++ +++ +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
H I++RDLKP+NLL++ G +KL DFG A
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 71.2 bits (175), Expect = 4e-14
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 9/121 (7%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
QI +++ + E + N IVKLY + + ++ME GG L+ +L
Sbjct: 38 QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEP 95
Query: 303 FD--DATTRFYTA-CVVEAFDYLHSRN---IIYRDLKPENLLLSTSGYV-KLVDFGFAKK 355
A + YLHS +I+RDLKP NLLL G V K+ DFG A
Sbjct: 96 LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155
Query: 356 L 356
+
Sbjct: 156 I 156
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme
sensor, catabolite gene activator protein; HET: HEM;
2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Length = 222
Score = 69.6 bits (171), Expect = 4e-14
Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 27/178 (15%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ +G + + F++ G+++V + E + L GD F
Sbjct: 28 HAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEE--REISLFYLTSGDMFCM-------HS 78
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
+ A + D TF Q + + + + L D+
Sbjct: 79 GCLVEATER--TEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIK 136
Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
R+ ++ G ++ + + + +++ AN++ + + S
Sbjct: 137 QRIAGFF-------IDHANTTGRQTQGGVIVSVDFTV----EEI--ANLIGSSRQTTS 181
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic
nucleotide binding domain, C-linker, CAM SPHCN1, HCN;
HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Length = 198
Score = 69.2 bits (170), Expect = 5e-14
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 19 QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
+ +V ++ DY+I++G GD F I +G V + ++ +L
Sbjct: 84 SNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDII-----MSDGVIATSLSD 138
Query: 79 GDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
G +FGE L + R A++ + + + FNQ++ +R + R
Sbjct: 139 GSYFGEICLLTRERRVASVKCE--TYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVRR 194
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2; CNBD, C-linker, pacemaker,
HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A
{Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A*
3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Length = 202
Score = 68.5 bits (168), Expect = 8e-14
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ GDYIIR+G G + I G V V T+ L G +FGE L
Sbjct: 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVL------TKGNKEMKLSDGSYFGEICLLTR 150
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEE 142
RTA++ A + + FN+++ +R + +R R+ ++
Sbjct: 151 GRRTASVRAD--TYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKK 201
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 70.4 bits (173), Expect = 8e-14
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
Y++ME G L I+ +G A +A ++ H II+RD+KP N+++S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 342 SGYVKLVDFGFAK 354
+ VK++DFG A+
Sbjct: 152 TNAVKVMDFGIAR 164
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 70.4 bits (173), Expect = 8e-14
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFYTA-CVVEAFDYLHS 324
IV L ++ E G L+ +L G + D R A V + +YLH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 325 RN--IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
RN I++R+LK NLL+ VK+ DFG ++
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity,
CRP, CLP, C-DI-GMP receptor, quorum SENS binding,
transcription; 2.30A {Xanthomonas campestris PV}
Length = 230
Score = 68.9 bits (169), Expect = 9e-14
Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 12/133 (9%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD-DL 92
Y + R G T + + G V + ++ + E + G+F GE L + D
Sbjct: 39 YPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVGEMGLFIESDT 97
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLD-----EIRTKYVDETSER-RRLNEEFRSL 146
R + I E QL + I + S+R + L
Sbjct: 98 REVILRTRTQ--CELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRL 155
Query: 147 RLSDL--RVITTL 157
D+ R++ TL
Sbjct: 156 AFLDVTDRIVRTL 168
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 69.2 bits (170), Expect = 1e-13
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+ E EI+ D IVK ++ L ++ME G L L+ K D
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
YT+ + + +YL ++ I+RDL N+L+ VK+ DFG K L
Sbjct: 114 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Score = 29.6 bits (67), Expect = 1.3
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSF---ALKQMKKSQVMNLDD-LRTANI 199
L+ + LG G FG VE+ + + A+K+++ S +L D R I
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 69.7 bits (171), Expect = 2e-13
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
E +IM +V L F KD+ +L +++E + ++ R K
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE-YVPETVYRASRHYAKLKQTMPM 140
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
+ Y ++ + Y+HS I +RD+KP+NLLL SG +KL+DFG AK LI
Sbjct: 141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 68.9 bits (169), Expect = 3e-13
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+ E EI+ D IVK ++ L ++ME G L L+ K D
Sbjct: 85 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
YT+ + + +YL ++ I+RDL N+L+ VK+ DFG K L
Sbjct: 145 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
Score = 29.3 bits (66), Expect = 2.0
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSF---ALKQMKKSQVMNLDD-LRTANI 199
L+ + LG G FG VE+ + + A+K+++ S +L D R I
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 95
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 68.5 bits (168), Expect = 3e-13
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 255 SEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC 314
E IM N IVKLY + M+ME G+L+ L DK + + +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML 129
Query: 315 -VVEAFDYLHSRN--IIYRDLKPENLLLSTSGY-----VKLVDFGFAK 354
+ +Y+ ++N I++RDL+ N+ L + K+ DFG ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable
regulatory domain of potassium channel, membrane PR
transport protein; 2.20A {Mus musculus}
Length = 160
Score = 65.4 bits (160), Expect = 4e-13
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 19 QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
G + + GD I G D+ + G ++V +++ + L K
Sbjct: 40 DGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVI------QDDEVVAILGK 93
Query: 79 GDFFGEKALQGDDL--RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
GD FG+ + L AN+ A VI ++ +++ +
Sbjct: 94 GDVFGDVFWKEATLAQSCANVRALTY--CDLHVIKRDALQKVLEFYTAFSHSFSRNLILT 151
Query: 137 RRLNEE 142
L +
Sbjct: 152 YNLRKR 157
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 68.0 bits (167), Expect = 5e-13
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFD 320
+V+L + + ++ E + +L T L T + + D
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LH+ I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 67.7 bits (166), Expect = 6e-13
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLL 339
L ++ + C G L+ L + A + DYLH++NII+RD+K N+ L
Sbjct: 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL 165
Query: 340 STSGYVKLVDFGFAK 354
VK+ DFG A
Sbjct: 166 HEGLTVKIGDFGLAT 180
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 68.6 bits (168), Expect = 6e-13
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
E +IM + + IV+L F KD+ YL ++++ + ++ + R K
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPV 155
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
+ Y + + Y+HS I +RD+KP+NLLL + +KL DFG AK+L+
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 67.6 bits (166), Expect = 6e-13
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFD 320
+V+L+ + L ++ E + +L T L T + ++ D
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LHS +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 67.8 bits (166), Expect = 6e-13
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNF 303
QQ+ E +I+ + DFIVK ++ L ++ME G L L+ +
Sbjct: 65 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 124
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
D + Y++ + + +YL SR ++RDL N+L+ + +VK+ DFG AK L
Sbjct: 125 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
Score = 31.9 bits (73), Expect = 0.27
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSF---ALKQMKKSQVMNLDD-LRTANI 199
L+ I+ LG G FG VEL + + A+KQ++ S D R I
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic
nucleotide-binding domain, structural genomics, joint
for structural genomics; 2.55A {Eubacterium rectale atcc
33656}
Length = 220
Score = 66.1 bits (162), Expect = 7e-13
Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 8/129 (6%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD--FFGEKALQGDD 91
K+G I ++ G+++ + E + L+ D +
Sbjct: 31 VKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMCLLSASCIMRSI 89
Query: 92 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
I A +I E + ++ + + + R + +
Sbjct: 90 QFEVTIEAEKD--TDLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKS 147
Query: 151 L--RVITTL 157
L RV + L
Sbjct: 148 LDKRVASFL 156
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 67.3 bits (165), Expect = 8e-13
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNF 303
+ E EI+ + IVK T + ++ME G L L K
Sbjct: 64 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI 123
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y + + DYL SR ++RDL N+L+ + VK+ DFG K +
Sbjct: 124 NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
Score = 27.3 bits (61), Expect = 7.5
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 149 SDLRVITTLGVGGFGRV---ELVQIAGDPSRSFALKQMKK-SQVMNLDD-LRTANI 199
L+ I LG G FG+V + A+K +K S ++ D + I
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken
structural genomics/proteomics in RSGI; 1.92A {Thermus
thermophilus} PDB: 2zdb_A
Length = 195
Score = 64.1 bits (157), Expect = 3e-12
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
+ + I +G T + + +G V+V P+ +R + GD+FGE+AL+G
Sbjct: 4 FARKETIYLRGEEARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFGEEALEGKA-Y 61
Query: 94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
A ++ + E + + + RR+ L+ +L
Sbjct: 62 RYTAEAMTE--AVVQGLEPRAMDH------EALHRVARNLARQMRRVQAYEAHLQTGELR 113
Query: 152 -RVITTL 157
R+ L
Sbjct: 114 ARIARYL 120
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 65.5 bits (160), Expect = 4e-12
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
FK + Y +M+ME LG +L I G F +T +++ +Y+H ++ D+K
Sbjct: 121 FKGRSYRFMVME-RLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKA 179
Query: 335 ENLLLSTSGY--VKLVDFGFAKKLIGPR 360
NLLL V L D+G + +
Sbjct: 180 ANLLLGYKNPDQVYLADYGLSYRYCPNG 207
>3ukn_A Novel protein similar to vertebrate potassium VOL channel,
subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD,
CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB:
3ukt_B 3ukv_B
Length = 212
Score = 63.6 bits (155), Expect = 5e-12
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 19 QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
+G + ++ +F G+++IRQG + + G ++V + + L K
Sbjct: 88 RGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEV------LKDNTVLAILGK 141
Query: 79 GDFFGEKALQGDDL--RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
GD G +L + + AN+ A I + +++ E K+V E
Sbjct: 142 GDLIGSDSLTKEQVIKTNANVKAL--TYCDLQYISLKGLREVLRLYPEYAQKFVSEIQHD 199
Query: 137 RRLN 140
N
Sbjct: 200 LTYN 203
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 65.1 bits (159), Expect = 5e-12
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
+ + E +I+ + I+K L ++ME G L L + +
Sbjct: 74 PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIG 132
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
A + + E YLH+++ I+RDL N+LL VK+ DFG AK +
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
Score = 28.1 bits (63), Expect = 4.2
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSF---ALKQMKK-SQVMNLDD-LRTANI 199
L+ I LG G FG+V L + A+K +K + + + +I
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI 86
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 65.4 bits (160), Expect = 6e-12
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
+ + E I+ + + IV+L K+ +Y++ME GG+ T LR +G
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213
Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
T +YL S+ I+RDL N L++ +K+ DFG +++ Y
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 64.2 bits (157), Expect = 9e-12
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 268 IVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
I+ L KD + ++ E + + + D RFY +++A DY HS
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSM 149
Query: 326 NIIYRDLKPENLLL-STSGYVKLVDFGFA 353
I++RD+KP N+++ ++L+D+G A
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 63.8 bits (156), Expect = 9e-12
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 280 YLYMLMESCLGGELWTILRDKGNFD-DATTRFYTAC-VVEAFDYLHSRN--IIYRDLKPE 335
+ ++ G L+ +L + NF D + A + +LH+ I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142
Query: 336 NLLLSTSGYVKLVDFGFAK 354
++++ ++
Sbjct: 143 SVMIDEDMTARISMADVKF 161
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 64.8 bits (158), Expect = 9e-12
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Query: 268 IVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN---------FDDATTRFYTACVV 316
++ L K F + +++L + +LW I++ + ++
Sbjct: 80 VISLQKVFLSHADRKVWLLFD-YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFA 353
+ YLH+ +++RDLKP N+L+ G VK+ D GFA
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 65.3 bits (158), Expect = 1e-11
Identities = 51/355 (14%), Positives = 107/355 (30%), Gaps = 98/355 (27%)
Query: 25 IVYFSSQTFYKEGD-YIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYI---------R 74
I+ F D ++ + I+SK ++ + ++
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKS----ILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76
Query: 75 TLYKGDFFGEKALQGD------DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 128
+ + F E L+ + ++T P ++ + I+Q ++L +
Sbjct: 77 EMVQ-KFVEE-VLRINYKFLMSPIKTEQR---QPSMMTRMYIEQR--DRLYNDNQVFAKY 129
Query: 129 YVDETSERRRLNEEFRS--LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS 186
V R + + R L L + + GV G G+ + A D S+ ++
Sbjct: 130 NV----SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV---ALDVCLSYKVQCKMDF 182
Query: 187 QV--MNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQI 244
++ +NL + + V + + ID + I+ + +E RR
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKL-LYQIDPN-WTSRSDHSSNIKLRIHSIQAELRR---- 236
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
K K Y E+CL L +L +
Sbjct: 237 -----------------------------LLKSKPY-----ENCL---L--VLLN----- 252
Query: 305 DATTRFYTACVVEAFDYLHSRNIIY-RDLKPENLLLS-TSGYVKLVDF--GFAKK 355
A AF+ L + ++ R + + L + T+ ++ L
Sbjct: 253 -----VQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary
phase, DNA-binding, transcription regulation; 1.50A
{Thermus thermophilus}
Length = 202
Score = 62.3 bits (152), Expect = 1e-11
Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 34 YKEGDYIIRQGARG--DTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD 91
+K GD I+ G G D + + +G V++ +R + G FFGE+AL G +
Sbjct: 10 FKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFGEEALFGQE 68
Query: 92 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
R AA V + + +L+ L S+ L
Sbjct: 69 -RIYFAEAATD--VRLEPLPENPDPELLKDL-------AQHLSQGLAEAYRRIERLATQR 118
Query: 151 L--RVITTL 157
L R+ L
Sbjct: 119 LKNRMAAAL 127
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA;
3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Length = 355
Score = 64.1 bits (156), Expect = 1e-11
Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 2 SKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVT 61
+N +L + V++ IV G I R G GD F + +G V V
Sbjct: 224 VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVA 283
Query: 62 MKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISS 121
P L G FFGE AL + R+A + AA VS L + F L SS
Sbjct: 284 TPNPV--------ELGPGAFFGEMALISGEPRSATVSAATT--VSLLSLHSADFQMLCSS 333
Query: 122 LDEIRTKYVDETSERRRLNEE 142
EI + ERR
Sbjct: 334 SPEIAEIFRKTALERRGAAAS 354
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 63.0 bits (154), Expect = 3e-11
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 253 IMSEKEI--MGEANCDFIVKLY--------KTFKDKKYLYMLMESC---LGGELWTILRD 299
I + +EI + + +V L + K +Y++ + C L G +L +
Sbjct: 61 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG----LLSN 116
Query: 300 KG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
F + + ++ Y+H I++RD+K N+L++ G +KL DFG A
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 62.3 bits (152), Expect = 3e-11
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRN 326
I+ L + L ++ME GG L +L K A + +YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI--PPDILVNWAVQIARGMNYLHDEA 125
Query: 327 ---IIYRDLKPENLLLSTSGY--------VKLVDFGFAK 354
II+RDLK N+L+ +K+ DFG A+
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 62.8 bits (153), Expect = 4e-11
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)
Query: 227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYM--- 283
I+ T+ + + + + + KYL +
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHH----KSVIVNPSQNKYLNVIME 118
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STS 342
+ L L + +R + Y + A ++HS I +RD+KP+NLL+ S
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 343 GYVKLVDFGFAKKLI 357
+KL DFG AKKLI
Sbjct: 179 NTLKLCDFGSAKKLI 193
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 62.4 bits (152), Expect = 4e-11
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 245 VETRQQQH--IMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
+E + + + E + + D I ++Y KY M++E LG L +
Sbjct: 41 LEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDLFDLCD 99
Query: 302 -NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKK 355
F T ++ +Y+HS+N+IYRD+KPEN L+ G + ++DF AK+
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159
Query: 356 LIGPR 360
I P
Sbjct: 160 YIDPE 164
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 62.9 bits (153), Expect = 5e-11
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNFDDA 306
+ + + E +M E +V+L + Y++ E G L LR ++
Sbjct: 259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
+ + A +YL +N I+R+L N L+ + VK+ DFG ++ + G Y
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 60.8 bits (148), Expect = 1e-10
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-F 303
+ Q + A C I +Y ++ + ++++ LG L +L G F
Sbjct: 45 RRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID-LLGPSLEDLLDLCGRKF 103
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKKLIG 358
T ++ +H ++++YRD+KP+N L+ + +VDFG K
Sbjct: 104 SVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163
Query: 359 PR 360
P
Sbjct: 164 PV 165
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 61.0 bits (148), Expect = 2e-10
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT 307
+ + E ++M + + +V+LY ++ +Y++ E G L L+ G +
Sbjct: 305 SPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
A + Y+ N ++RDL+ N+L+ + K+ DFG A+ + Y
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 59.3 bits (144), Expect = 3e-10
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 263 ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDY 321
I + + Y M+ME LG L + F T ++ +Y
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 322 LHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIGPR 360
+HS+N I+RD+KP+N L+ V ++DFG AKK R
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 59.7 bits (145), Expect = 4e-10
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
++ + + F + ++ M E L L+ +++ F R + +++ D LH
Sbjct: 161 VIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 326 NIIYRDLKPENLLLSTSGY--VKLVDFG 351
II+ DLKPEN+LL G +K++DFG
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG 247
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 59.4 bits (144), Expect = 4e-10
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 16/95 (16%)
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV-------VEAFDYLHSRNI 327
K Y +M+M+ G +L I RF V ++ +Y+H
Sbjct: 121 KNGKSYRFMIMDR-FGSDLQKIYEANAK------RFSRKTVLQLSLRILDILEYIHEHEY 173
Query: 328 IYRDLKPENLLLSTSGY--VKLVDFGFAKKLIGPR 360
++ D+K NLLL+ V LVD+G A +
Sbjct: 174 VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEG 208
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 59.7 bits (145), Expect = 4e-10
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRF 310
++E +M + +V+L ++K LY++ E G L LR +G
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
++ V EA +YL N ++RDL N+L+S K+ DFG K+ +
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 59.4 bits (144), Expect = 5e-10
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILR--DKGNFDDATTRFYTACVVEAFDYLHSRNIIY 329
KY ++++ LG L + L K + + +++A ++LH ++
Sbjct: 124 GFGVHQDKYRFLVLP-SLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVH 182
Query: 330 RDLKPENLLLSTSGY--VKLVDFGFAKK 355
++ EN+ + V L +GFA +
Sbjct: 183 GNVTAENIFVDPEDQSQVTLAGYGFAFR 210
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 59.8 bits (145), Expect = 5e-10
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT 308
+ + E ++M + + +V+LY ++ +Y++ E G L L+ G +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 309 RFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
A + Y+ N ++RDL+ N+L+ + K+ DFG A+ + Y
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 59.5 bits (144), Expect = 6e-10
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLA 491
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 58.0 bits (141), Expect = 8e-10
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
++ + E M + + IVKL + ++++ME C GEL + L+ K + D A
Sbjct: 58 SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLA 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ Y + A YL S+ ++RD+ N+L+S++ VKL DFG ++ +
Sbjct: 117 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 58.4 bits (142), Expect = 8e-10
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+ + I+ E +M + + +L + ++ + G L +R+ K N
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 58.9 bits (142), Expect = 9e-10
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 263 ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDY 321
I + + Y ++M+ LG L + T ++ ++
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMD-LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 322 LHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIGPR 360
+HS++ ++RD+KP+N L+ + V ++DFG AKK
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160
>2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP,
cyclic nucleotide, regulation, auto-inhibition, CDC25
homology domain; 2.7A {Mus musculus}
Length = 999
Score = 59.5 bits (143), Expect = 9e-10
Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 33 FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEE-KYIRTLYKGDFFGEKALQGDD 91
++G + RQG G ++ + G + V + + +S ++ I TL G FGE ++ +
Sbjct: 69 NLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE-SILDNT 127
Query: 92 LRTANIVAADPEGVSC--LVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLS 149
R A IV + L I+QE F L + + + + R+
Sbjct: 128 PRHATIVTRES----SELLRIEQEDFKALWEKYRQYMAGLLAPP--YGVMETGSNNDRIP 181
Query: 150 DLRVITTLGVGGFGRVELVQI 170
D + + + G++ + I
Sbjct: 182 DKENVPSEKILRAGKILRIAI 202
Score = 52.9 bits (126), Expect = 9e-08
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ K G + QG G +++II KG V V + + + TL++GD FG+ AL D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
R A+IV + + L +D+E FN+++ + E T + E +
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDV-EANTVRLKEHDQ 460
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 58.6 bits (142), Expect = 1e-09
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNFD 304
+ + ++E +M D +VKL+ K+ +Y++ E G L L+ +
Sbjct: 224 SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
++A + E ++ RN I+RDL+ N+L+S S K+ DFG A+ + Y
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 57.2 bits (139), Expect = 2e-09
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRF 310
++E +M + +V+L ++K LY++ E G L LR +G
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
++ V EA +YL N ++RDL N+L+S K+ DFG K
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 57.7 bits (140), Expect = 2e-09
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+Q+ + E IMG+ + I++L K + ++ E G L LR+ G F
Sbjct: 88 KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL + N ++RDL N+L++++ K+ DFG ++ L
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 57.2 bits (139), Expect = 2e-09
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
E + M + + +VK Y + +Y++ E G L LR G + +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 314 C-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
V E +L S I+RDL N L+ VK+ DFG + ++ +Y
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 57.3 bits (139), Expect = 2e-09
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
RQ++ +SE IMG+ + I++L + ++ E G L T LR G F
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL ++RDL N+L+ ++ K+ DFG ++ L
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 57.9 bits (140), Expect = 2e-09
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 268 IVKLY--------KTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
+VK+ + F + Y+ + + +S + + R + + ++
Sbjct: 114 VVKVLDIVIPKDVEKFDEL-YVVLEIADS----DFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
Y+HS I++RDLKP N L++ VK+ DFG A
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 57.3 bits (139), Expect = 2e-09
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+ Q + +G + IV+L L ++ + G L +R +G
Sbjct: 56 RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + YL +++R+L N+LL + V++ DFG A L
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 57.5 bits (139), Expect = 2e-09
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
+ F+D +Y++ME + L +++ D + ++ +LHS II+RD
Sbjct: 136 LEEFQD---VYLVME-LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
LKP N+++ + +K++DFG A+
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTA 214
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 56.9 bits (138), Expect = 2e-09
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
+ + +++E +M + + +IV++ + + ++ME G L L+ + D
Sbjct: 58 DPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD 116
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL N ++RDL N+LL T Y K+ DFG +K L
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 57.4 bits (139), Expect = 2e-09
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+Q++ + E IMG+ + I++L K + ++ E G L + LR F
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ YL ++RDL N+L++++ K+ DFG + L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 56.4 bits (137), Expect = 2e-09
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT 308
++ + E E+M + + +V+LY ++ + ++ E G L LR +G F T
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
V E YL +I+RDL N L+ + +K+ DFG + ++ +Y
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 56.5 bits (137), Expect = 3e-09
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDATTRFY 311
+ E +M E +V+L + Y++ E G L LR+ + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ A +YL +N I+RDL N L+ + VK+ DFG ++
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 56.5 bits (137), Expect = 3e-09
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
+ E ++M + + +V+LY ++ ++++ E G L LR+ +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 314 C-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
V EA +YL S+ ++RDL N L++ G VK+ DFG ++ ++ Y
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 56.5 bits (137), Expect = 3e-09
Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+ ++E IM + + ++ L + + +++ G+L +R+ N
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 127
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ V + YL S+ ++RDL N +L VK+ DFG A+ +
Sbjct: 128 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 56.6 bits (137), Expect = 3e-09
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+ + I+ E +M + + +L + ++ + G L +R+ K N
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + + +YL R +++RDL N+L+ T +VK+ DFG AK L
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 55.7 bits (135), Expect = 5e-09
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD 304
+ + E M + +++LY + M+ E G L LR +G+F
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL 119
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
T Y V E YL S+ I+RDL NLLL+T VK+ DFG + L
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 56.2 bits (136), Expect = 5e-09
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
+ F D YL M M++ +L I+ F + ++ +++ Y+HS +++R
Sbjct: 98 LRNFYDF-YLVMPFMQT----DLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHR 150
Query: 331 DLKPENLLLSTSGYVKLVDFGFAK 354
DLKP NL ++ +K++DFG A+
Sbjct: 151 DLKPGNLAVNEDCELKILDFGLAR 174
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 56.1 bits (136), Expect = 6e-09
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 268 IVKLYKTF-------KDKKYLYM---LMESCLGGELWTILRDKGNFDDATTRFYTACVVE 317
IV+L F + YL + + L R + + + ++
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 318 AFDYLH--SRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
+ LH S N+ +RD+KP N+L+ G +KL DFG AKKL
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 55.9 bits (135), Expect = 6e-09
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+ ++E IM + + ++ L + + +++ G+L +R+ N
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 191
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ V + +L S+ ++RDL N +L VK+ DFG A+ +
Sbjct: 192 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 56.1 bits (136), Expect = 6e-09
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
+ KD Y+ LME+ +L+ +L+ + + ++ ++ Y+HS
Sbjct: 94 IRAPTIEQMKDV-YIVQDLMET----DLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFA 353
N+++RDLKP NLLL+T+ +K+ DFG A
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 55.8 bits (135), Expect = 6e-09
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILR-DKGNFDDATTRFYTACVVEAFDYLHS 324
F+ YL LM + +L ++ + +++ ++ LH
Sbjct: 98 FVHFEEPAMHKL-YLVTELMRT----DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE 152
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+++RDL P N+LL+ + + + DF A
Sbjct: 153 AGVVHRDLHPGNILLADNNDITICDFNLA 181
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 55.4 bits (134), Expect = 6e-09
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
+Q + + E +M N ++ L + ++L+ G+L +R + N
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ V +YL + ++RDL N +L S VK+ DFG A+ +
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 55.8 bits (135), Expect = 7e-09
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
F D YL M M + +L +++ + + +F +++ Y+H+ II+R
Sbjct: 99 LDDFTDF-YLVMPFMGT----DLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152
Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
DLKP NL ++ +K++DFG A
Sbjct: 153 DLKPGNLAVNEDCELKILDFGLA 175
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 54.9 bits (133), Expect = 8e-09
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
++ MSE IM + IVKL +++ +++ME GEL L K +
Sbjct: 55 DNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL 113
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
T Y+ + +A YL S N ++RD+ N+L+++ VKL DFG ++ +
Sbjct: 114 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 56.1 bits (135), Expect = 8e-09
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+ +M E +IM + + +IV+L + + L ++ME GG L L + +
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVS 436
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL +N ++R+L N+LL Y K+ DFG +K L
Sbjct: 437 NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 55.5 bits (134), Expect = 8e-09
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
I F + Y+ + + +S +L + + + + ++ +++H
Sbjct: 94 IIPDDLLKFDEL-YIVLEIADS----DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFA 353
II+RDLKP N LL+ VK+ DFG A
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 55.4 bits (134), Expect = 9e-09
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 12/121 (9%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLY------KTFKDKKYLYMLMESCLGGELWTILRDKG 301
+ + E M E + + KL + +++ G+L L
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 302 NFDDATT------RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
++ + + +YL SRN I+RDL N +L+ V + DFG ++K
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 356 L 356
+
Sbjct: 187 I 187
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 55.4 bits (134), Expect = 9e-09
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
+ F D YL LM + +L I++ + D +F ++ Y+HS +II+R
Sbjct: 103 LEEFNDV-YLVTHLMGA----DLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
DLKP NL ++ +K++DFG A
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLA 179
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 55.0 bits (133), Expect = 1e-08
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
R++ ++E +M E NC +V+L + ++ME G+L + LR
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 308 TRFYTACVVE----AFD------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+ + A + YL++ ++RDL N +++ VK+ DFG + +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 54.6 bits (132), Expect = 1e-08
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ + + E I+ + N IV+ ++LME GG+L + LR+
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 307 TTRFYTACVVE-AFD------YLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
+ ++ A D YL + I+RD+ N LL+ G K+ DFG A+ +
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 55.1 bits (133), Expect = 1e-08
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
+ F+D Y+ M LM++ L +++ D + ++ +LHS II+R
Sbjct: 99 LEEFQDV-YIVMELMDA----NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
DLKP N+++ + +K++DFG A
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLA 174
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 54.8 bits (132), Expect = 1e-08
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 27/133 (20%)
Query: 244 IVETRQQQHIMSEKEI--MGEANCDFIVKLY----KTFKDKKYLYMLMESCLGGELWTIL 297
I +R+++ E EI + I+ K L+++ + G L+ L
Sbjct: 72 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131
Query: 298 RDKGNFDDATTRFYTACVVEAFD------YLHSR--------NIIYRDLKPENLLLSTSG 343
T + A +LH I +RDLK +N+L+ +G
Sbjct: 132 NRY------TVTVEGMIKL-ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184
Query: 344 YVKLVDFGFAKKL 356
+ D G A +
Sbjct: 185 TCCIADLGLAVRH 197
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 54.7 bits (132), Expect = 2e-08
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
IV L + F + +L ++ E L L+ +LR+ TR + + A +L +
Sbjct: 118 IVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 326 --NIIYRDLKPENLLLSTSGY--VKLVDFGFA 353
+II+ DLKPEN+LL +K+VDFG +
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 54.3 bits (131), Expect = 2e-08
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 27/133 (20%)
Query: 244 IVETRQQQHIMSEKEI--MGEANCDFIVKLY----KTFKDKKYLYMLMESCLGGELWTIL 297
I +R+++ E EI + I+ K L+++ + G L+ L
Sbjct: 33 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92
Query: 298 RDKGNFDDATTRFYTACVVEAFD------YLHSR--------NIIYRDLKPENLLLSTSG 343
T + A +LH I +RDLK +N+L+ +G
Sbjct: 93 NRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 145
Query: 344 YVKLVDFGFAKKL 356
+ D G A +
Sbjct: 146 TCCIADLGLAVRH 158
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 54.0 bits (130), Expect = 2e-08
Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
+ ++ + ++ E GG L + + A + A D H +
Sbjct: 93 VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIR--AMQSLAAAADAAHRAGV 150
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
P + +S G V L
Sbjct: 151 ALSIDHPSRVRVSIDGDVVLAYPATM 176
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 53.9 bits (130), Expect = 2e-08
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ + + E I+ + N IV+ ++L+E GG+L + LR+
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 307 TTRFYTACVVE-AFD------YLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
+ ++ A D YL + I+RD+ N LL+ G K+ DFG A+ +
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 53.8 bits (130), Expect = 3e-08
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 22/105 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
V++ + F+ ++ ++ E LG + +++ G F R + ++ ++LHS
Sbjct: 79 CVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 326 NIIYRDLKPENLLLSTSGY-------------------VKLVDFG 351
+ + DLKPEN+L S Y +K+VDFG
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4,
CAMP, SP-camps, GEF, gunanine nucleotide exchange
factor, G-protein, GTP-binding, nucleotide-binding; HET:
SP1; 2.20A {Mus musculus}
Length = 694
Score = 54.1 bits (129), Expect = 4e-08
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
++ K G + QG G +++II KG V V + + + TL++GD FG+ AL D
Sbjct: 58 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 112
Query: 91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
R A+IV + + L +D+E FN+++ ++ + + +
Sbjct: 113 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQD 156
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 53.0 bits (128), Expect = 4e-08
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
++ E + +V L + L M+ C G+L L + D
Sbjct: 54 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 308 TRFYTACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
+ V A + YL S +++++DL N+L+ VK+ D G
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 173
Query: 352 FAKKL 356
+++
Sbjct: 174 LFREV 178
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 52.6 bits (127), Expect = 4e-08
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
+ +M E +IM + + +IV+L + + L ++ME GG L L + +
Sbjct: 52 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVS 110
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V YL +N ++RDL N+LL Y K+ DFG +K L
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 53.2 bits (128), Expect = 5e-08
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
YLHS +++RD+KP N+LL+ +VK+ DFG +
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 52.7 bits (127), Expect = 5e-08
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 25/132 (18%)
Query: 244 IVETRQQQHIMSEKEIMGEANC--DFIVKLY----KTFKDKKYLYMLMESCLGGELWTIL 297
I +R ++ E E+ + I+ + L+++ G L+ L
Sbjct: 38 IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97
Query: 298 RDKGNFDDATTRFYTAC-----VVEAFDYLHSR--------NIIYRDLKPENLLLSTSGY 344
+ T + + +LH I +RDLK +N+L+ +G
Sbjct: 98 QLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ 151
Query: 345 VKLVDFGFAKKL 356
+ D G A
Sbjct: 152 CCIADLGLAVMH 163
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 53.1 bits (128), Expect = 5e-08
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 22/105 (20%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
V + F ++ + E LG + L++ + R + A +LH
Sbjct: 84 CVLMSDWFNFHGHMCIAFE-LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN 142
Query: 326 NIIYRDLKPENLLLSTSGY-------------------VKLVDFG 351
+ + DLKPEN+L S + +++ DFG
Sbjct: 143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 53.0 bits (128), Expect = 5e-08
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
Y+ ME+ +L +L +G + R + ++ Y+HS N+++R
Sbjct: 91 LTELNSV-YIVQEYMET----DLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHR 144
Query: 331 DLKPENLLLSTSGY-VKLVDFGFA 353
DLKP NL ++T +K+ DFG A
Sbjct: 145 DLKPANLFINTEDLVLKIGDFGLA 168
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 53.0 bits (128), Expect = 5e-08
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
LH N+I+RDLKP NLL++++ +K+ DFG A
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 52.3 bits (126), Expect = 7e-08
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLY-----KTFKDKKYLYMLMESCLGGELWTILR--- 298
R+ + +SE M + + +++L + + +++ G+L T L
Sbjct: 77 QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR 136
Query: 299 ---DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ T + + +YL +RN ++RDL N +L V + DFG +KK
Sbjct: 137 LETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 356 L 356
+
Sbjct: 197 I 197
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 52.0 bits (125), Expect = 9e-08
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 15/115 (13%)
Query: 256 EKEIMGEANC--DFIVKLY----KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
E EI + I+ K LY++ + G L+ L+ D +
Sbjct: 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSML 137
Query: 310 FYTACVVEAFDYLHSRN--------IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V +LH+ I +RDLK +N+L+ +G + D G A K
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 51.8 bits (125), Expect = 1e-07
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 16/125 (12%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
++ E E++ + IVK Y D L M+ E G+L LR G
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 308 TRFYTACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
YL S++ ++RDL N L+ + VK+ DFG
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 352 FAKKL 356
++ +
Sbjct: 179 MSRDV 183
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 51.4 bits (124), Expect = 1e-07
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 254 MSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTR 309
++E +M + +V+LY T ++ +Y++ E G L L+
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
A + E ++ RN I+RDL+ N+L+S + K+ DFG A+ + Y
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 51.5 bits (124), Expect = 2e-07
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 15/125 (12%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
+Q E E++ IV+ + + + L M+ E G+L LR G
Sbjct: 84 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143
Query: 307 TTRFYTACVVE---------AFD------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
A YL + ++RDL N L+ VK+ DFG
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 203
Query: 352 FAKKL 356
++ +
Sbjct: 204 MSRDI 208
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 50.7 bits (122), Expect = 2e-07
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 9/119 (7%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
+ +M + + +V Y ++ E G L T L+ N +
Sbjct: 53 RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINI 112
Query: 307 TTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGY--------VKLVDFGFAKKL 356
+ A + A +L +I+ ++ +N+LL +KL D G + +
Sbjct: 113 LWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 50.7 bits (122), Expect = 3e-07
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 24/128 (18%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
+SE ++ + N ++KLY L +++E G L LR+ +
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 314 CVVEAFD------------------------YLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
+ D YL +++RDL N+L++ +K+ D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 350 FGFAKKLI 357
FG ++ +
Sbjct: 194 FGLSRDVY 201
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 50.6 bits (121), Expect = 3e-07
Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 19/136 (13%)
Query: 244 IVETRQQQHIMSEKEIMGEA--NCDFIVKLY-----KTFKDKKYLYMLMESCLGGELWTI 296
+ +Q+ ++EK I D I + T + ++ME G L
Sbjct: 43 VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKY 102
Query: 297 LRDKGNFDDATTRFYTAC-VVEAFDYLHS---------RNIIYRDLKPENLLLSTSGYVK 346
L + D + A V YLH+ I +RDL N+L+ G
Sbjct: 103 LSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160
Query: 347 LVDFGFAKKLIGPRYS 362
+ DFG + +L G R
Sbjct: 161 ISDFGLSMRLTGNRLV 176
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 50.3 bits (121), Expect = 4e-07
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
MSE +IM + IV L + ++ E C G+L LR K + F
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 313 --------------ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
+ V + +L S+N I+RD+ N+LL+ K+ DFG A
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 49.9 bits (120), Expect = 5e-07
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 19/122 (15%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
MSE +++ IV L ++ E C G+L LR K + +
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133
Query: 313 ACVVEAF------------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+ +L S+N I+RDL N+LL+ K+ DFG A+
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 193
Query: 355 KL 356
+
Sbjct: 194 DI 195
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 50.1 bits (120), Expect = 5e-07
Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 66/216 (30%)
Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
++ LG G F V L + D+ VA +V
Sbjct: 22 ILVRKLGWGHFSTVWLAK-----------------------DMVNNTHVAM------KIV 52
Query: 212 IDQETFNQLISSLDEIRT-KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
+ + + ++ DEI+ + V++ + + I+K
Sbjct: 53 RGDKVYTE--AAEDEIKLLQRVNDADNTKEDSM--------------------GANHILK 90
Query: 271 LYKTFK----DKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHS 324
L F + ++ M+ E LG L +++ + + + ++ DY+H
Sbjct: 91 LLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 149
Query: 325 R-NIIYRDLKPENLLLSTSGY------VKLVDFGFA 353
R II+ D+KPEN+L+ +K+ D G A
Sbjct: 150 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 49.6 bits (119), Expect = 7e-07
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 28/111 (25%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
IVK + F ++ ++ E LG L+ I+ F + Y +++A +YL
Sbjct: 98 IVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 326 NIIYRDLKPENLLLSTSGY-------------------------VKLVDFG 351
++ + DLKPEN+LL + +KL+DFG
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 48.1 bits (115), Expect = 2e-06
Identities = 28/133 (21%), Positives = 42/133 (31%), Gaps = 24/133 (18%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
Q E +M E + IVKL K + +L E G+L LR +
Sbjct: 92 DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 151
Query: 308 TRFYTACVVEAFD------------------------YLHSRNIIYRDLKPENLLLSTSG 343
YL R ++RDL N L+ +
Sbjct: 152 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 211
Query: 344 YVKLVDFGFAKKL 356
VK+ DFG ++ +
Sbjct: 212 VVKIADFGLSRNI 224
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 47.2 bits (112), Expect = 4e-06
Identities = 46/234 (19%), Positives = 84/234 (35%), Gaps = 38/234 (16%)
Query: 149 SDLRVITTLGVGGFGRV---ELVQIAGDPSRS-FALKQMKK--SQVMNLDDLRTA----- 197
L++ LG G FG+V + I + A+K +K+ + + +
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 198 -----NIVAA-----DPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
N+V P G ++++ F L + L R ++V +
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT----------- 130
Query: 248 RQQQHIMSEKEIMGEANCDFIVKL-----YKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
+ K+ +G D +L ++ ++ S + E K
Sbjct: 131 -KGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
Y+ V + ++L SR I+RDL N+LLS VK+ DFG A+ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 47.3 bits (113), Expect = 4e-06
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 18/121 (14%)
Query: 254 MSEKEIMGEANC-DFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
MSE +I+ +V L K L +++E C G L T LR K N
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 312 TACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
+ ++L SR I+RDL N+LLS VK+ DFG A+
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 356 L 356
+
Sbjct: 198 I 198
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 47.2 bits (113), Expect = 4e-06
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
+LH + I+RD+K N+LL + K+ DFG A+
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 47.4 bits (113), Expect = 4e-06
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+SE E+M I+ L LY+++E G L L+ + + +
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 313 ----------------ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
V +YL S+ I+RDL N+L++ +K+ DFG A+ +
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 46.2 bits (110), Expect = 8e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 17/119 (14%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+SE E+M I+ L LY+++E G L LR + +
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193
Query: 313 ACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
E +YL S+ I+RDL N+L++ + +K+ DFG A+
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 46.0 bits (110), Expect = 8e-06
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
YLH+R II+RD+K N+LL + K+ DFG +K
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
Score = 28.3 bits (64), Expect = 3.7
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 7/53 (13%)
Query: 120 SSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVIT-------TLGVGGFGRV 165
S + D S + E + L DL T +G G FG+V
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKV 55
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 46.1 bits (110), Expect = 9e-06
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
+SE E+M I+ L LY+++E G L LR + +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 313 ACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
E YL S+ I+RDL N+L++ + +K+ DFG A+ +
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Score = 27.6 bits (62), Expect = 6.2
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 149 SDLRVITTLGVGGFGRV---ELVQIAGDPSRSF---ALKQMKKS 186
L + LG G FG+V E V I D + A+K +K
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 45.9 bits (109), Expect = 9e-06
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Query: 321 YLHSR----------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
YLH I +RD+K +N+LL + + DFG A K
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 45.7 bits (109), Expect = 1e-05
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 17/119 (14%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
E E++ + I+ L + + YLY+ +E G L LR +
Sbjct: 73 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 313 ACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
DYL + I+RDL N+L+ + K+ DFG ++
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 45.4 bits (108), Expect = 1e-05
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 24/128 (18%)
Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
MSE ++M + + IV L +Y++ E C G+L LR K Y
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 313 ACVVEAF-----------------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
++L ++ ++RDL N+L++ VK+ D
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 350 FGFAKKLI 357
FG A+ ++
Sbjct: 216 FGLARDIM 223
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 43.4 bits (102), Expect = 7e-05
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVE 317
N + +V+L FK ++ M+ E LG L + + V++
Sbjct: 99 NREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157
Query: 318 AFDYLHSR-NIIYRDLKPENLLLS 340
DYLH++ II+ D+KPEN+LLS
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILLS 181
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 41.8 bits (97), Expect = 2e-04
Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 17/209 (8%)
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
L+ +G G FG V A+K + + DL + E +
Sbjct: 20 EKLQRCEKIGEGVFGEVFQTI---ADHTPVAIKIIA----IEGPDLVNGSHQKTFEEILP 72
Query: 209 CLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
++I +E L+S RT+ + V+ ++ +
Sbjct: 73 EIIISKEL--SLLSGEVCNRTEGFIGL----NSVHCVQGSYPPLLLKAWDHYNSTKGSAN 126
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR-NI 327
+ D+ ++ + E G +L + + A + + + + +
Sbjct: 127 DRPDFFKDDQLFIVLEFEFG-GIDLEQMRTKLSSLATAKSILH--QLTASLAVAEASLRF 183
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
+RDL N+LL + KL K
Sbjct: 184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSS 212
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 41.8 bits (99), Expect = 2e-04
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 321 YLH---SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
YLH II+RD+K N+LL + DFG AK
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.0 bits (93), Expect = 0.001
Identities = 33/197 (16%), Positives = 54/197 (27%), Gaps = 70/197 (35%)
Query: 186 SQV--MNLDDLRTANIVAADPEGVSCLV---IDQETFNQLISSLDEI-----RTKYVDET 235
SQ M +D L + A D V D + S+ +I +
Sbjct: 1626 SQEQGMGMD-LYKTSKAAQD-------VWNRADNHFKDTYGFSILDIVINNPVNLTIHFG 1677
Query: 236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-----KKYLY-------- 282
E+ + +I E ++ E D +K K FK+ Y +
Sbjct: 1678 GEKGK--RIRENYS--------AMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLS 1727
Query: 283 ---------MLMESCLGGELWTILRDKGNFDDATTRF-------YTA--CVVEAFDY--- 321
LME + L+ KG T F Y A + +
Sbjct: 1728 ATQFTQPALTLMEKAA----FEDLKSKGLIPADAT-FAGHSLGEYAALASLADVMSIESL 1782
Query: 322 ---LHSRNIIYRDLKPE 335
+ R + + P
Sbjct: 1783 VEVVFYRGMTMQVAVPR 1799
Score = 37.3 bits (86), Expect = 0.008
Identities = 52/346 (15%), Positives = 102/346 (29%), Gaps = 125/346 (36%)
Query: 51 FIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVI 110
+S G ++ + P ++ FF A Q L+ PE
Sbjct: 9 LTLSHGSLEHVLLVPTAS------------FF--IASQ---LQ-EQFNKILPEPTEGFAA 50
Query: 111 DQETFNQLISSLDEIRTK---YVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVEL 167
D E ++ E+ K YV E ++ + + L L + F E
Sbjct: 51 DDEP-----TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLC---------LTEF---E- 92
Query: 168 VQIAGDPSRSFALKQMKKSQVMNLDDLRTANI--VAADPEGVSCLVIDQETFNQLISSLD 225
+ L +I +AA L+ + +T L+ + +
Sbjct: 93 --------NCY---------------LEGNDIHALAAK------LLQENDT--TLVKTKE 121
Query: 226 EIRTKY-----VDETSERRRAPQIVETRQQQHIMSEKEIM----GEANCD--F--IVKLY 272
I+ +++ + + + +++ G+ N D F + LY
Sbjct: 122 LIKNYITARIMAKRPFDKKSNSALFRAVGEGNA----QLVAIFGGQGNTDDYFEELRDLY 177
Query: 273 KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF----------DYL 322
+T+ + L++ L ++R DA F + + DYL
Sbjct: 178 QTYHV--LVGDLIKFS-AETLSELIRTT---LDAEKVFTQGLNILEWLENPSNTPDKDYL 231
Query: 323 H----SRNII-------YR------DLKPENL---LLSTSGYVKLV 348
S +I Y P L L +G+ + +
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGL 277
Score = 35.0 bits (80), Expect = 0.049
Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 70/170 (41%)
Query: 73 IRTLYK-GDFFGEKALQGDDLRTAN--IVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 129
+ ++ G A+ D+L +N ++A +P V+ QE L +
Sbjct: 1783 VEVVFYRGMTMQV-AVPRDELGRSNYGMIAINPGRVA-ASFSQEA-------LQYV---- 1829
Query: 130 VDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELV-------Q--IAGDPSRSFAL 180
V+ +R G VE+V Q AGD AL
Sbjct: 1830 VERVGKR----------------------TGWL--VEIVNYNVENQQYVAAGDLR---AL 1862
Query: 181 KQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 230
+ L+ ++ I ++ Q++ SL+E+
Sbjct: 1863 DTVTNV----LNFIKLQKID---------IIELQKSL-----SLEEVEGH 1894
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics,
APC88869, cyclic nucleotide binding REG protein, PSI-2;
1.80A {Cytophaga hutchinsonii}
Length = 194
Score = 37.4 bits (87), Expect = 0.003
Identities = 11/118 (9%), Positives = 34/118 (28%), Gaps = 4/118 (3%)
Query: 34 YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE-KALQGDDL 92
++ + +++ G + + KG +++ E+ + + + + A Q
Sbjct: 35 VRKKETLLKTGEICRINYFVVKGCLRLFFIDEK-GIEQTTQFAIENWWLSDYMAFQKQQP 93
Query: 93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
I + E L I L + + + + + +
Sbjct: 94 ADFYIQSV--ENCELLSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMY 149
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 34.7 bits (79), Expect = 0.021
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 197 ANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE----------RRRAPQIVE 246
A+ + +PE + +E + + LD E E +R++ Q+ +
Sbjct: 77 ADRLTQEPE---SIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEK 133
Query: 247 TRQQQHIMSEKEIMGEANCDFI 268
+ I ++K + + D I
Sbjct: 134 NKINNRI-ADKAFYQQPDADII 154
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens}
Length = 185
Score = 31.2 bits (71), Expect = 0.33
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 153 VITTLGVGGFGRVELVQIAGDPSRSFALKQ 182
++ +GV F +L +IA F +
Sbjct: 139 IVYAVGVKDFNETQLARIADSKDHVFPVND 168
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 30.0 bits (67), Expect = 1.3
Identities = 5/34 (14%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
+ + D+ N+L+ + ++D+ + P+
Sbjct: 208 LCHSDIHAGNVLVGNEESIYIIDWDEPM--LAPK 239
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 29.6 bits (66), Expect = 1.4
Identities = 6/31 (19%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
D N+++ + +D G + RY
Sbjct: 190 DACLPNIMVENGRFSGFIDCGRL--GVADRY 218
>4dgw_C PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 231
Score = 29.7 bits (66), Expect = 1.4
Identities = 11/56 (19%), Positives = 15/56 (26%), Gaps = 12/56 (21%)
Query: 227 IRTKYVDETSERRRAPQIVETRQQQH-IMSEKEIMGEANCDFIVKLYKTFKDKKYL 281
I+ Y E E I+S E+ K KK+L
Sbjct: 120 IQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQ-----------KGKKFL 164
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 29.6 bits (67), Expect = 1.9
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
LH ++I+ DL N + Y ++DFG K
Sbjct: 447 LHKNDVIHNDLTTSNFIFDKDLY--IIDFGLGK 477
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane
protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a
1sht_X 1t6b_Y*
Length = 182
Score = 28.9 bits (65), Expect = 2.0
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 154 ITTLGVGGFGRVELVQIAGDPSRSF 178
+ +GV F + +L +IA + F
Sbjct: 137 VYCVGVLDFEQAQLERIADSKEQVF 161
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 28.5 bits (63), Expect = 3.5
Identities = 5/31 (16%), Positives = 11/31 (35%), Gaps = 2/31 (6%)
Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
DL N+ + +D G + ++
Sbjct: 189 DLGDSNIFVKDGKVSGFIDLGRSG--RADKW 217
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone;
2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1
PDB: 2b26_A
Length = 170
Score = 27.2 bits (61), Expect = 5.4
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 32 TFYKEGDYIIRQGARGDTFFIIS 54
T+ +GDY + G R F+I
Sbjct: 53 TYKNQGDYNPQTGRRKTLQFVIQ 75
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix,
structural; 1.70A {Homo sapiens}
Length = 86
Score = 26.0 bits (58), Expect = 5.7
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 122 LDEIRTKYVDETSERRRLNEEFRSLR 147
+ +R K +E +R +S R
Sbjct: 30 IMRLREKLQEEMLQREEAENTLQSFR 55
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor
homology domain, karyog mitosis, microtubules; HET: ADP
EBC; 2.30A {Saccharomyces cerevisiae}
Length = 403
Score = 27.6 bits (62), Expect = 6.4
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 112 QETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLR 147
+E + E+ + E + RR L+ E + LR
Sbjct: 23 KEKIKDTELGMKELNEILIKEETVRRTLHNELQELR 58
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.137 0.388
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,575,835
Number of extensions: 344367
Number of successful extensions: 1788
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1411
Number of HSP's successfully gapped: 411
Length of query: 362
Length of database: 6,701,793
Length adjustment: 95
Effective length of query: 267
Effective length of database: 4,049,298
Effective search space: 1081162566
Effective search space used: 1081162566
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.2 bits)