RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14754
(192 letters)
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 162 bits (409), Expect = 1e-51
Identities = 101/187 (54%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + + L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+DP+
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKK 185
TI++L K KQ+P+ PE +A+ + A Y+ECSA +++G++ VF+ A AAL+ + KK
Sbjct: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184
Query: 186 KGRCRLL 192
RC LL
Sbjct: 185 SRRCVLL 191
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 161 bits (407), Expect = 2e-51
Identities = 160/177 (90%), Positives = 166/177 (93%)
Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQ 63
IRKKLVIVGDGACGKTCLLIV SKDQFPEVYVPTVFENYVADIEVD KQVELALWDTAG
Sbjct: 1 IRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGL 60
Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123
EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN
Sbjct: 61 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 120
Query: 124 DPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
D +T +EL KMKQEPVKPEEGR MA +I AF Y+ECSAK+K+GVREVFE ATRAALQ
Sbjct: 121 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 177
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 151 bits (382), Expect = 1e-47
Identities = 91/178 (51%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQ 63
++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D++++EL+LWDT+G
Sbjct: 1 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 60
Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123
YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR
Sbjct: 61 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 120
Query: 124 DPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKE-GVREVFETATRAALQ 180
D +T+ EL+ +Q PV ++G MA++I A Y+ECSA E VR++F AT A +
Sbjct: 121 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 178
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 148 bits (374), Expect = 3e-46
Identities = 94/173 (54%), Positives = 130/173 (75%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V KQ L L+DTAGQEDY
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
DRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DLR+DP
Sbjct: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAAL 179
T+ LN MK++P+ E+G+ +A++I A Y+ECSA +++G++ VF+ A A L
Sbjct: 131 TLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 146 bits (369), Expect = 2e-45
Identities = 104/174 (59%), Positives = 130/174 (74%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQEDY
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K DLR+D +
Sbjct: 67 DRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 126
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
TI++L + K P+ +G AMA++I A YLECSA ++ G++ VF+ A RA L
Sbjct: 127 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 180
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 144 bits (365), Expect = 5e-45
Identities = 47/179 (26%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAGQED 65
K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++ K+V+L +WDTAGQE
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 63
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y I++ + I + NI + + +H ++LVGNK D+
Sbjct: 64 FRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV 123
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
T ++G A+A+++ ++E SAK+ + V E+F T + +++K
Sbjct: 124 VT-------------ADQGEALAKELGI-PFIESSAKNDDNVNEIFFTLAK---LIQEK 165
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 141 bits (356), Expect = 1e-43
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAGQED 65
KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+D K+++L +WDTAGQE
Sbjct: 8 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 67
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y I++ + I + S +NI +H +V +++GNK
Sbjct: 68 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC------ 121
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ + V E G +A ++E SAK+ V F T R +K K
Sbjct: 122 ------DVNDKRQVSKERGEKLALDYGI-KFMETSAKANINVENAFFTLAR---DIKAKM 171
Query: 186 K 186
Sbjct: 172 D 172
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 138 bits (349), Expect = 1e-42
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDSKQVELALWDTAGQED 65
K+V++G+ GKTCL+ F++ FP T+ + + +E++ ++V+L +WDTAGQE
Sbjct: 7 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 66
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y + +++ + I +S +PE ++ V +LVGNK DL
Sbjct: 67 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 126
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKK 183
++ + E YLE SAK + V ++F + +
Sbjct: 127 EVSQQRAEEFSE-------------AQDMYYLETSAKESDNVEKLFLDLACRLISEAR 171
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 137 bits (345), Expect = 9e-42
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAGQED 65
KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+D K V+L +WDTAGQE
Sbjct: 8 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 67
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y + I++ + + +S + ++ V +LVGNK DL++
Sbjct: 68 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKR 127
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ----- 180
++ K + K +LE SA V + F T R +
Sbjct: 128 VVEYDVAKEFADANK-------------MPFLETSALDSTNVEDAFLTMARQIKESMSQQ 174
Query: 181 ------VKKKKKGRCRL 191
KK+ KG L
Sbjct: 175 NLNETTQKKEDKGNVNL 191
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 132 bits (333), Expect = 3e-40
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYVADIEVDSKQVELALWDTAGQED 65
K+V++GD GK+ LL F++++F E I+VD K ++ +WDTAGQE
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
Y R+ Y L+ + I + EN+ H N+ I+LVGNK D
Sbjct: 66 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD----- 120
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
V +E RA A+K N +++E SA V E F+ ++ +K
Sbjct: 121 -------LRHLRAVPTDEARAFAEKNNL-SFIETSALDSTNVEEAFKNILTEIYRIVSQK 172
Query: 186 K 186
+
Sbjct: 173 Q 173
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 131 bits (330), Expect = 6e-40
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDSKQVELALWDTAGQED 65
K +I+GD GK+CLL F++ +F T+ E IEV ++++L +WDTAGQE
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y LM + I + ++ T PN IIL+GNK DL
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQR 125
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRA 177
+ EE + A++ +LE SAK+ E V + F A +
Sbjct: 126 DVTY------------EEAKQFAEENGL-LFLEASAKTGENVEDAFLEAAKK 164
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 128 bits (323), Expect = 1e-38
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDSKQVELALWDTAGQED 65
K +I+GD GK+CLL+ F+ +F V+ T+ E + +D KQ++L +WDTAGQE
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y L+ + I ++ ++ +H N+ I+L+GNK DL +
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 124
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ + EEG A A++ ++E SAK+ V E F + +K +
Sbjct: 125 DVKR------------EEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIY--RKIQ 169
Query: 186 KG 187
+G
Sbjct: 170 QG 171
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 127 bits (319), Expect = 4e-38
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAGQED 65
K +++G+ GK+CLL F + +F + T+ + I V K V+L +WDTAGQE
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ + Y L+ + I S ++ + T N+ IIL GNKKD
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKD----- 121
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ + + + N +LE SA + E V E F R L +
Sbjct: 122 --------LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESG 173
Query: 186 K 186
+
Sbjct: 174 E 174
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 124 bits (311), Expect = 6e-37
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K+V++G G GK+ L + F F E Y PT+ + Y +IEVDS L + DTAG E +
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQF 64
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
+R L + ++ +S+ + S ++I ++ VP+ILVGNK DL
Sbjct: 65 ASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL---- 120
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATR 176
+ V EGRA+A++ ++E SAKSK V E+F R
Sbjct: 121 --------ESEREVSSSEGRALAEEWGC-PFMETSAKSKTMVDELFAEIVR 162
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 123 bits (309), Expect = 1e-36
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAGQED 65
K++I+G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTAGQE
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
Y + Y ++ + I + +S + + T + N ++LVGNK
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC------ 120
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ + V E GR +A + F + E SAK V++ FE +
Sbjct: 121 ------DMEDERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICE 168
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 122 bits (307), Expect = 2e-36
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN--YVADIEVDSKQVELALWDTAGQE 64
K+++VGD GKTCLL+ F F + ++VD +V+L +WDTAGQE
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 67
Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124
+ + Y D +L+ + + + S +NI T ++ +V ++L+GNK
Sbjct: 68 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV----- 122
Query: 125 PNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKK 183
+ + VK E+G +A++ ++E SAK+ V F + ++K+
Sbjct: 123 -------DSAHERVVKREDGEKLAKEYGL-PFMETSAKTGLNVDLAFTAIAK---ELKR 170
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 121 bits (305), Expect = 3e-36
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV-DSKQVELALWDTAGQED 65
KLV +G+ + GKT L+ F D F Y T+ ++++ + + + L LWDTAGQE
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ L P D+ ++ + I + +S + + +V I+LVGNK DL +
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 121
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRA 177
EEG A+++N ++E SAK+ V+++F A
Sbjct: 122 QVS------------IEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAA 160
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 122 bits (306), Expect = 6e-36
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-----------VADIEVDSKQVEL 55
KL+ +GD GKT L ++ ++F ++ TV ++ + +V L
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 66
Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIIL 114
LWDTAGQE + L + D L+ F + S S N+ + + +C N I+L
Sbjct: 67 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 126
Query: 115 VGNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETA 174
+GNK DL Q V + R +A K Y E SA + + V + ET
Sbjct: 127 IGNKADL------------PDQREVNERQARELADKYGI-PYFETSAATGQNVEKAVETL 173
Query: 175 TRAALQVKKKK 185
++ ++
Sbjct: 174 LDLIMKRMEQC 184
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 121 bits (304), Expect = 1e-35
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDSKQVELALWDTAGQED 65
K++I+G+ GK+ LL+ F+ D F T+ + V I VD + +LA+WDTAGQE
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 68
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ L P Y +++ + + D+ + + N + ++ K
Sbjct: 69 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNK------ 122
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ V EG A+K + ++E SAK+ +GV+ FE +Q
Sbjct: 123 ------IDKENREVDRNEGLKFARKHSM-LFIEASAKTCDGVQCAFEELVEKIIQ 170
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 117 bits (293), Expect = 3e-34
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE-VDSKQVELALWDTAGQED 65
K++++GDG GK+ L+ + ++F T+ ++ VD V + +WDTAGQE
Sbjct: 8 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 67
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF----CPNVPIILVGNKKDL 121
+ LR Y +D L+ FS+D S +N+ + + + P +++GNK D+
Sbjct: 68 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 127
Query: 122 RNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ EE +A + + Y E SAK V FE A R L
Sbjct: 128 SERQVS-------------TEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 173
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 110 bits (276), Expect = 8e-32
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDSKQVELALWDTAGQED 65
K+V++G+G GKT L++ + +++F + ++ T+ +++ + + K+V LA+WDTAGQE
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQER 64
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ L P+ Y D++ ++ + I DS + + K + + +VGNK DL +
Sbjct: 65 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 124
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ + + + A+ + A + SAK +G+ E+F + ++
Sbjct: 125 HVSIQEAE------------SYAESVGA-KHYHTSAKQNKGIEELFLDLCKRMIE 166
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 110 bits (276), Expect = 9e-32
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KLV++G G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E +
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQF 64
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
+R L + + +SI + + ++ + ++ +VP+ILVGNK D
Sbjct: 65 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD----- 119
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKK 183
+ V E+G+ +A++ A+LE SAKSK V E+F R Q+ +
Sbjct: 120 -------LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVR---QINR 167
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 109 bits (273), Expect = 2e-31
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KLV+VG G GK+ L I ++ F + Y PT+ ++Y + +D + L + DTAGQE+Y
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIILVGNKKDLRNDP 125
+R + L F+I++ S E+I + + +VP++LVGNK DL
Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAART 124
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
++ + + Y+E SAK+++GV + F T R Q
Sbjct: 125 VESRQAQDLARS--------------YGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 108 bits (271), Expect = 5e-31
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 14/175 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDSKQVELALWDTAGQED 65
KLV++G+ A GK+ L++ F K QF E T+ + +D V+ +WDTAGQE
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
Y L P+ Y ++ + I + +S + PN+ I L GNK D
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKAD----- 122
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ + + N+ ++E SAK+ V E+F + +
Sbjct: 123 --------LANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 107 bits (267), Expect = 2e-30
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE--VDSKQVELALWDTAGQE 64
K++I+GD GKT L+ + D++ + Y T+ +++ K + +WDTAGQE
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 63
Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN----VPIILVGNKKD 120
+ L Y D ++ + + + S ENI + H N P +++GNK D
Sbjct: 64 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKID 123
Query: 121 LRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ E + + +A+ + SAK+ V FE R+ALQ
Sbjct: 124 AEESKKIVSEKSAQE-----------LAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 172
Query: 181 VKK 183
+
Sbjct: 173 QNQ 175
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 105 bits (263), Expect = 7e-30
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 3 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELA-LWDT 60
A+R+ K+ ++GD GK+ ++ F +D F PT+ +++ ++ +WDT
Sbjct: 1 ALRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 60
Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120
AG E + L P+ Y + ++ + I ++ + +H P++ + + GNK D
Sbjct: 61 AGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCD 120
Query: 121 LRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRA 177
L + + + + A I+A ++E SAK+ + E+F +R
Sbjct: 121 LTDVREVM------------ERDAKDYADSIHAI-FVETSAKNAININELFIEISRR 164
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 105 bits (262), Expect = 1e-29
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KLV+VG G GK+ L I F + F Y PT+ ++Y VD L + DTAGQE++
Sbjct: 8 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEF 67
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDP 125
+R L+ F+I+ S + + +T ++ + P++LVGNK DL +
Sbjct: 68 GAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQ- 126
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
P + + AY E SAK + V E FE RA + +++
Sbjct: 127 ------------RQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 173
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 105 bits (261), Expect = 2e-29
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDS-KQVELALWDTAGQED 65
KLV++G+ A GK+ +++ F + F E PT+ ++ + V+ +WDTAGQE
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
+ L P+ Y + L+ + + P S + ++ I LVGNK D+ +
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE- 123
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
+ V EEG +A++ + E SAK+ E V +VF ++ K
Sbjct: 124 --------GGERKVAREEGEKLAEEKGL-LFFETSAKTGENVNDVFLGIGE---KIPLK 170
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 104 bits (260), Expect = 2e-29
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K+++VG G GK+ L + F D+F E Y PT ++Y + +D ++V++ + DTAGQEDY
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRND 124
+R + + L FSI +S + ++ NVP +LVGNK DL
Sbjct: 66 AAIRDNYFRSGEGFLCVFSITEMESF-AATADFREQILRVKEDENVPFLLVGNKSDL--- 121
Query: 125 PNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
+ V EE + A + N Y+E SAK++ V +VF R +++ +
Sbjct: 122 ---------EDKRQVSVEEAKNRADQWNV-NYVETSAKTRANVDKVFFDLMR---EIRAR 168
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 104 bits (258), Expect = 7e-29
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 18/185 (9%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFE-NYVADIEVDSKQVELALWDTAGQED 65
K++I+GD GKT L+ + +F Y T+ ++ VD + V + +WDTAGQE
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 63
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP----NVPIILVGNKKDL 121
+ L Y D ++ F + +P++ + + + P N P +++GNK DL
Sbjct: 64 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 123
Query: 122 RNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQV 181
N + +A N Y E SAK V + F+T R AL+
Sbjct: 124 ENRQVA-------------TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 170
Query: 182 KKKKK 186
+ + +
Sbjct: 171 ETEVE 175
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 102 bits (254), Expect = 2e-28
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
++ + G G GK+ L++ F K F E Y+PTV + Y I D L + DT G +
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 63
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT--PEVKHFCPNVPIILVGNKKDLRND 124
++ LS ++ +SI S SLE + + E+K ++PI+LVGNK
Sbjct: 64 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNK------ 117
Query: 125 PNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
++ V+ E A+A+ A++E SAK V+E+F+ K++
Sbjct: 118 ------CDESPSREVQSSEAEALARTWKC-AFMETSAKLNHNVKELFQELLN---LEKRR 167
Query: 185 K 185
Sbjct: 168 T 168
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 98.2 bits (243), Expect = 8e-27
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+LV+VG G GK+ L I F + F Y PT+ ++Y +D + L + DTAGQE++
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEF 66
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDP 125
+R + L+ FS+ S E I + ++ P+IL+GNK DL +
Sbjct: 67 GAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQR 126
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKK 183
EEG+ +A+++ Y+E SAK + V + F R + ++
Sbjct: 127 QVT------------QEEGQQLARQLKV-TYMEASAKIRMNVDQAFHELVRVIRKFQE 171
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 97.8 bits (242), Expect = 1e-26
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KLV+VGDG GK+ L I F + F Y PT+ ++Y+ E+D++ L + DTAGQE++
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
+R D L+ +S+ S E++ ++ + P+ILV NK DL +
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMH-- 123
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKE-GVREVFETATRAALQ 180
V ++G+ MA K N Y+E SAK V + F R Q
Sbjct: 124 ----------LRKVTRDQGKEMATKYNI-PYIETSAKDPPLNVDKTFHDLVRVIRQ 168
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 96.3 bits (238), Expect = 3e-26
Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 13/167 (7%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
++++VG A GKT +L + F V+ K + +WD GQ+
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE----TVEYKNISFTVWDVGGQDKI 57
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
L + +T ++ + + + E+ + ++LV K +
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 117
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
E + + G + N + A S +G+ E +
Sbjct: 118 NAAE--------ITDKLGLHSLRHRNWY-IQATCATSGDGLYEGLDW 155
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 94.3 bits (233), Expect = 2e-25
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDSKQVELALWDTAGQED 65
K++++GD GKTCL F +FP+ T+ + +++D +++++ LWDTAGQE
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 63
Query: 66 YDRL-RPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIILVGNKKDLRN 123
+ + Y + ++ + + + S ++P +H ++P ILVGNK DL
Sbjct: 64 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL-- 121
Query: 124 DPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSK---EGVREVFET 173
V + + A + E SAK+ + V +F T
Sbjct: 122 ----------RSAIQVPTDLAQKFADTHSM-PLFETSAKNPNDNDHVEAIFMT 163
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 92.8 bits (229), Expect = 8e-25
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDSKQVELALWDTAG 62
+ K+V+VG+GA GK+ ++ + K F + Y T+ +++ I+V+ + V L LWDTAG
Sbjct: 1 VAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAG 60
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122
QE++D + Y ++ FS +S E I W +V ++P LV NK D
Sbjct: 61 QEEFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKID-- 117
Query: 123 NDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ +K EE +A+++ + S K V EVF+ LQ
Sbjct: 118 ----------LLDDSCIKNEEAEGLAKRLKL-RFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 92.4 bits (228), Expect = 2e-24
Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 19/183 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+L ++GD GK+ L+ F + T E Y ++ VD + + + + AG D
Sbjct: 7 RLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQYKKEMLVDGQTHLVLIREEAGAPDA 65
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP---NVPIILVGNKKDLRN 123
D ++ FS++ +S + + + + LVG + +
Sbjct: 66 KF-----SGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISA 120
Query: 124 DPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKK 183
+ RA+ + +Y E A V VF+ + + ++K
Sbjct: 121 SSPRVVG----------DARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRK 170
Query: 184 KKK 186
+++
Sbjct: 171 QQQ 173
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 92.0 bits (227), Expect = 2e-24
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDSKQVELALWDTAG 62
++ KLV+VGDG GKT + +F + YV T+ + ++ +WDTAG
Sbjct: 2 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 61
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122
QE + LR Y ++ F + S + W ++ C N+PI+L GNK D++
Sbjct: 62 QEKFGGLRDGYYIQAQCAIIMFDVTSRVT-YKNVPNWHRDLVRVCENIPIVLCGNKVDIK 120
Query: 123 NDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQ 180
+ K + +++ ++ Y + SAKS + F R +
Sbjct: 121 DRKVKAKSIVFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARKLIG 163
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 91.2 bits (225), Expect = 3e-24
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KL I G GK+ L++ F +F Y PT+ Y +D + V + + DTAGQED
Sbjct: 4 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDT 63
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
+ R + ++ + I S E + + NV +ILVGNK DL +
Sbjct: 64 IQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDH-- 120
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEG-VREVFETATRAALQVKKK 184
V EEG +A ++ A+ ECSA + EG + E+F R +V+++
Sbjct: 121 ----------SRQVSTEEGEKLATELAC-AFYECSACTGEGNITEIFYELCR---EVRRR 166
Query: 185 K 185
+
Sbjct: 167 R 167
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 90.5 bits (223), Expect = 1e-23
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 7/169 (4%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KLV +G GKT LL + D+ + + E+ + +D G
Sbjct: 15 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSE----ELTIAGMTFTTFDLGGHIQA 70
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDP 125
R+ P + I+ + L E+ + NVPI+++GNK D
Sbjct: 71 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 130
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINA--FAYLECSAKSKEGVREVFE 172
+ + +G +++NA CS ++G E F
Sbjct: 131 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFR 179
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 89.0 bits (219), Expect = 2e-23
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQED 65
+K+ I+G + GK+ L I F + QF + Y PT+ + I V+ ++ L L DTAGQ++
Sbjct: 5 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDE 64
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRND 124
Y D + ++ +S+ S S E I + +PI+LVGNKKDL
Sbjct: 65 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDL--- 121
Query: 125 PNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAA 178
+ + EEG+A+A+ NA A+LE SAK + +VF A
Sbjct: 122 ---------HMERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 165
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 87.3 bits (215), Expect = 1e-22
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 15/167 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+++++G A GKT +L Q F K V+ +WD GQ+
Sbjct: 14 RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY----KNVKFNVWDVGGQDKI 69
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
L Y T ++ D ++ ++ + + I++ NK+DL +
Sbjct: 70 RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA- 128
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
MK ++ + G + N + A S +G+ E
Sbjct: 129 --------MKPHEIQEKLGLTRIRDRNWY-VQPSCATSGDGLYEGLT 166
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 85.9 bits (211), Expect = 4e-22
Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 8/167 (4%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KL+ +G GKT LL + D+ PT E+ ++ +D G
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSE---ELAIGNIKFTTFDLGGHIQA 57
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLEN-IPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 125
RL +P+ + I+ P+ + E +VP +++GNK D N
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
+ + + + + + CS + G E F+
Sbjct: 118 SEAELRSALGLLNTTGSQ---RIEGQRPVEVFMCSVVMRNGYLEAFQ 161
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 85.0 bits (209), Expect = 1e-21
Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 18/180 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+++I+G GKT +L + PT+ N + K ++L +WD GQ
Sbjct: 19 RILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVE---TLSYKNLKLNVWDLGGQTSI 74
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
Y DT ++ D + ++ ++ + +++ NK+D
Sbjct: 75 RPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGAL 134
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ + ++ +K ++ + SA EG+ E + +K+++
Sbjct: 135 SASEVSKELNLVELKDRS----------WSIVASSAIKGEGITEGLDWLID---VIKEEQ 181
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 82.7 bits (203), Expect = 9e-21
Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 15/167 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K++IVG GKT +L FS ++ E+ +WD GQE
Sbjct: 17 KVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDIGGQESL 72
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRNDP 125
Y +T+ +++ + + E+ + H +++ NK+D++
Sbjct: 73 RSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK--- 129
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
M + + C A + EG+ + E
Sbjct: 130 ------ECMTVAEISQFLKLTSIKDHQWH-IQACCALTGEGLCQGLE 169
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 79.2 bits (194), Expect = 2e-19
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 15/168 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+++++G GKT LL + + + F V S+ +L +WD GQ
Sbjct: 18 RILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIK----SVQSQGFKLNVWDIGGQRKI 73
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDLRNDP 125
+ +TD+++ E ++ T ++ VP+++ NK+DL
Sbjct: 74 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDL---- 129
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
L + + CSA + EGV++
Sbjct: 130 -----LTAAPASEIAEGLNLHTIRDRVWQ-IQSCSALTGEGVQDGMNW 171
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 78.6 bits (192), Expect = 3e-19
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 20/183 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFS--KDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQE 64
++V++G+ GK+ L +F+ D + Y + VD + + L D +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE--VKHFCPNVPIILVGNKKDLR 122
+ + + + + + ++PIILVGNK
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS--- 121
Query: 123 NDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVK 182
+ ++ V EGRA A + ++E SA + V+E+FE R QV+
Sbjct: 122 ---------DLVRCREVSVSEGRACAVVFDC-KFIETSAAVQHNVKELFEGIVR---QVR 168
Query: 183 KKK 185
++
Sbjct: 169 LRR 171
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 77.4 bits (189), Expect = 7e-19
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+L +VG GKT + V + QF E +PT ++ V + LWD GQ +
Sbjct: 4 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPT---VGFNMRKITKGNVTIKLWDIGGQPRF 60
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRNDP 125
+ I+ + +E + + +P++++GNK+DL
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP--- 117
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
+ ++ + + + Q S K K+ + +
Sbjct: 118 ------GALDEKELIEKMNLSAIQDREI-CCYSISCKEKDNIDITLQW 158
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 76.7 bits (187), Expect = 1e-18
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K++++G GK+ L +F + Y I VD ++ L ++D Q+
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGP-EAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGG 61
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDP 125
L D ++ +S+ S E E + + VPIILVGNK
Sbjct: 62 RWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKS------ 115
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ ++ V +EGRA A + ++E SA V+ +FE R + K
Sbjct: 116 ------DLVRSREVSVDEGRACAVVFDC-KFIETSAALHHNVQALFEGVVRQIRLRRDSK 168
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 76.9 bits (188), Expect = 2e-18
Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 32/198 (16%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KL+++G G GK+ ++ + K + ++D GQ
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVE--------THFTFKDLHFKMFDVGGQRSE 55
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDS----------LENIPEKWTPEVKHFC-PNVPIILV 115
+ + I+ C ++ D + + + + + IIL
Sbjct: 56 RKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILF 115
Query: 116 GNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINA-------------FAYLECSAK 162
NKKDL + L E A I A
Sbjct: 116 LNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCAT 175
Query: 163 SKEGVREVFETATRAALQ 180
+ V+ VF+ T ++
Sbjct: 176 DTKNVQFVFDAVTDVIIK 193
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 75.5 bits (184), Expect = 4e-18
Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 18/179 (10%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+L+++G GKT +L F+ + PT+ N + +L +WD GQ+
Sbjct: 4 RLLMLGLDNAGKTTILKKFNGEDVDT-ISPTLGFNIKTLEH---RGFKLNIWDVGGQKSL 59
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIILVGNKKDLRNDP 125
+ TD ++ +++ + + +++ NK+DL
Sbjct: 60 RSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGAL 119
Query: 126 NTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 184
+ ++ + ++ + CSA + E + + + +
Sbjct: 120 SCNAIQEALELDSIRSHH----------WRIQGCSAVTGEDLLPGIDWLLD---DISSR 165
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 73.2 bits (178), Expect = 3e-17
Identities = 27/179 (15%), Positives = 52/179 (29%), Gaps = 16/179 (8%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+++I+G GKT +L + F K ++ +WD G
Sbjct: 7 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTY----KNLKFQVWDLGGLTSI 62
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
Y +TD ++ D + + ++ I++V K
Sbjct: 63 RPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAM 122
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
T E+ G + + SA G+ E E +K ++
Sbjct: 123 TSSEMAN--------SLGLPALKDRKW-QIFKTSATKGTGLDEAMEWLVE---TLKSRQ 169
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 72.7 bits (177), Expect = 1e-16
Identities = 36/198 (18%), Positives = 59/198 (29%), Gaps = 29/198 (14%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KL+++G G GK+ + VPT D + V + D GQ
Sbjct: 4 KLLLLGTGESGKSTFIKQMRIIHGS--GVPTTGIIE---YPFDLQSVIFRMVDVGGQRSE 58
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIP----------EKWTPEVKH-FCPNVPIILV 115
R + + I+ ++ D + + + + + N +IL
Sbjct: 59 RRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILF 118
Query: 116 GNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKI-------------NAFAYLECSAK 162
NKKDL + L E P+ A++ A
Sbjct: 119 LNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCAT 178
Query: 163 SKEGVREVFETATRAALQ 180
E +R VF LQ
Sbjct: 179 DTENIRFVFAAVKDTILQ 196
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 62.6 bits (151), Expect = 5e-13
Identities = 35/199 (17%), Positives = 57/199 (28%), Gaps = 31/199 (15%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K++++G G GK+ L + PT + + + K V + D GQ
Sbjct: 4 KILLLGAGESGKSTFLKQM---RIIHGQDPTKGIHE---YDFEIKNVPFKMVDVGGQRSE 57
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----------PNVPIILV 115
+ + IL S D + + + NV IIL
Sbjct: 58 RKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILF 117
Query: 116 GNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYL--------------ECSA 161
NK DL + + + E QK + +A
Sbjct: 118 LNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTA 177
Query: 162 KSKEGVREVFETATRAALQ 180
+ E +R VF L
Sbjct: 178 INTENIRLVFRDVKDTILH 196
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 62.0 bits (149), Expect = 8e-13
Identities = 24/173 (13%), Positives = 59/173 (34%), Gaps = 8/173 (4%)
Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQED 65
+ ++ VG GKT L + Q+ + ++ ++ +++ L L D G E
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHES 59
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPE------KWTPEVKHFCPNVPIILVGNKK 119
+ + F +DS + + + + + +++ NK+
Sbjct: 60 LRFQLLDRFKS-SARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQ 118
Query: 120 DLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
D+ + ++++E R+ A + + K+G F
Sbjct: 119 DIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFS 171
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 55.9 bits (134), Expect = 2e-10
Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 29/194 (14%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
+L+++G G GK+ ++ V T + + + +V ++D GQ D
Sbjct: 8 RLLLLGAGESGKSTIVKQMRILHV----VLTS---GIFETKFQVDKVNFHMFDVGGQRDE 60
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDS-----------LENIPEKWTPEVKHFCPNVPIILV 115
R + D I+ + S + E + + + + +IL
Sbjct: 61 RRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILF 120
Query: 116 GNKKDL-----RNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREV 170
NK+DL + I++ PE+ + ++K +R+
Sbjct: 121 LNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRV------TRAKYFIRDE 174
Query: 171 FETATRAALQVKKK 184
F + A+ +
Sbjct: 175 FLRISTASGDGRHY 188
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 40.0 bits (92), Expect = 6e-05
Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)
Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYD 67
++I G GKT LL + + D V + + D V L + + Y
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPT-VVSQEPLSA--ADYDGSGVTLVDFPGHVKLRYK 62
Query: 68 RLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFC-----PNVPIILVGNKKD 120
L V + F +DS + + ++ ++ + I++ NK +
Sbjct: 63 LSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSE 122
Query: 121 LRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
L K + ++ E K E R + +E ++ +
Sbjct: 123 LFTARPPSKIKDALESEIQKVIERRK-----KSLNEVERKINEEDYAENTLDV 170
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 38.9 bits (89), Expect = 1e-04
Identities = 26/171 (15%), Positives = 52/171 (30%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
K+ IVG GK+ L + V D EV + DTAG
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRK 69
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
R+ P + + SI+ D + + + + ++ + +
Sbjct: 70 SRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNK 129
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRA 177
+++ K+ + R I+ + SA + + + A
Sbjct: 130 WDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLA 180
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 37.7 bits (87), Expect = 2e-04
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 19/125 (15%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQE 64
R K+ I+G G G + + + E+ + VF+ + +
Sbjct: 1 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKA-------IGEAMDINHGLPFM 53
Query: 65 DYDRLRPLSYPDTDVILMCFS------------IDSPDSLENIPEKWTPEVKHFCPNVPI 112
L Y D + +D I ++ T + + + I
Sbjct: 54 GQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVI 113
Query: 113 ILVGN 117
++V N
Sbjct: 114 LVVSN 118
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 37.8 bits (86), Expect = 2e-04
Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 27/174 (15%)
Query: 7 KLVIVGDGACGKTCLLIVFSK-------DQFPEVYVPTVFENYVADIEVDSKQVELALWD 59
K+VI G GK+ LL + D ++ + +
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREA 62
Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119
+ E R + ++ + + E W + +PI +V NK
Sbjct: 63 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKA 122
Query: 120 DLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
D+ + + E+N + SA++ EGV +
Sbjct: 123 DITGETLGMSEVNGHA--------------------LIRLSARTGEGVDVLRNH 156
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 36.9 bits (85), Expect = 3e-04
Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 19/125 (15%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQE 64
+K+V+VGDGA G + + + E + V ++ K L L D
Sbjct: 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT-------KGDALDLEDAQAFT 57
Query: 65 DYDRLRPLSYPDT---DVILMCFSIDSPDSLEN---------IPEKWTPEVKHFCPNVPI 112
++ Y D D++++ I V +
Sbjct: 58 APKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIF 117
Query: 113 ILVGN 117
++ N
Sbjct: 118 LVAAN 122
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 37.0 bits (85), Expect = 4e-04
Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 13/131 (9%)
Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAG 62
A + K+V+VG G G ++ K+ +V + + +N +D+ + +
Sbjct: 1 APKAKIVLVGSGMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLEN------------IPEKWTPEVKHFCPNV 110
+ L+ D ++ F+ S + I + +K CPN
Sbjct: 60 VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119
Query: 111 PIILVGNKKDL 121
II+V N D+
Sbjct: 120 FIIVVTNPVDV 130
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 35.0 bits (80), Expect = 0.002
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 18/125 (14%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN---YVADIEVDSKQVELALWDTA 61
RKK+ I+G G G T + +K+ V + V D+ ++ +E
Sbjct: 1 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY-EASPIEGFDVRVT 59
Query: 62 GQEDYDRLRPLSYPDTDVILMCFSI---------DSPDSLENIPEKWTPEVKHFCPNVPI 112
G +Y ++DVI++ D +I + PN I
Sbjct: 60 GTNNYADTA-----NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVI 114
Query: 113 ILVGN 117
I+V N
Sbjct: 115 IMVNN 119
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 35.1 bits (80), Expect = 0.002
Identities = 15/129 (11%), Positives = 39/129 (30%), Gaps = 16/129 (12%)
Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQED 65
+K+ I+G G G + ++ + E + Q +A + G
Sbjct: 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEA-KVKADQIDFQDAMANLEAHGNIV 60
Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW-------------TPEVKHFCPNVPI 112
+ L+ DV++ +++ +K + +
Sbjct: 61 INDWAALADA--DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVL 118
Query: 113 ILVGNKKDL 121
+++ N D+
Sbjct: 119 VVISNPVDV 127
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 34.6 bits (79), Expect = 0.002
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTA--G 62
R K+ +VG G G C + + K E+ + + + +D + L L
Sbjct: 19 RCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVF 78
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK----WTPEVKHFCPNVPIILVGNK 118
+DY+ S + L P V P+ II+V N
Sbjct: 79 GKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138
Query: 119 KDL 121
D+
Sbjct: 139 VDI 141
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 34.7 bits (79), Expect = 0.002
Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 7/122 (5%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
KL VG G G T E+ + + E+ +D +
Sbjct: 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG 61
Query: 67 DRLRPLSYPDTDVILMCFS-------IDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119
L + V+ + +D I + ++ P I++V N
Sbjct: 62 ADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121
Query: 120 DL 121
D+
Sbjct: 122 DV 123
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 34.3 bits (78), Expect = 0.004
Identities = 15/124 (12%), Positives = 38/124 (30%), Gaps = 16/124 (12%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTA--G 62
++V++G G G + + + ++ E+ + E+ +D ++
Sbjct: 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW 65
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE---------KWTPEVKHFCPNVPII 113
DYD R D++++C + + V +
Sbjct: 66 HGDYDDCRD-----ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120
Query: 114 LVGN 117
+ N
Sbjct: 121 VATN 124
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 33.9 bits (76), Expect = 0.005
Identities = 22/182 (12%), Positives = 47/182 (25%), Gaps = 26/182 (14%)
Query: 9 VIVGDGACGKTCLLIVFSK-----DQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQ 63
+ G GK+ L+ + + P V + + +D +
Sbjct: 4 IFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKEV 63
Query: 64 EDYDR-------LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-----NVP 111
++ + D V+++ P F ++P
Sbjct: 64 QERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIP 123
Query: 112 IILVGNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVF 171
I+ NK D + + K E E ++ SAK + + +
Sbjct: 124 TIVAVNKLDKIKNVQEVINFLAEKFEVPLSEID---------KVFIPISAKFGDNIERLK 174
Query: 172 ET 173
Sbjct: 175 NR 176
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 34.2 bits (77), Expect = 0.006
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 10/115 (8%)
Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 118
D G E D ++ + + P P+ V V +++
Sbjct: 92 DAPGHEVLMATMLSGAALMDGAILVVAANEPFP---QPQTREHFVALGIIGVKNLIIVQN 148
Query: 119 KDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
K + ++ K + SA K + + E
Sbjct: 149 KVDVVSKEEALSQYRQIKQFTKGTWA-------ENVPIIPVSALHKINIDSLIEG 196
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 33.1 bits (75), Expect = 0.008
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 12/122 (9%)
Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQE 64
K+ +VG G G C + + K E+ + V E+ + +D + L L
Sbjct: 20 NNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA 79
Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE---------KWTPEVKHFCPNVPIILV 115
D D ++ ++++ + + + P++ + P+ II+V
Sbjct: 80 DKDYSV---TANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV 136
Query: 116 GN 117
N
Sbjct: 137 SN 138
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 32.3 bits (72), Expect = 0.019
Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 31/176 (17%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAG---- 62
++VIVG GK+ LL + V V E+ + + + DTAG
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 63 ----QEDYDRLRPLS-YPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117
E R L D++L SP + ++ N ++V N
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLD------EEDRKILERIKNKRYLVVIN 115
Query: 118 KKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
K D+ N + NK+ + ++ SA EG+ ++ E+
Sbjct: 116 KVDVVEKINEEEIKNKLGTDR----------------HMVKISALKGEGLEKLEES 155
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 32.1 bits (71), Expect = 0.022
Identities = 16/167 (9%), Positives = 37/167 (22%), Gaps = 2/167 (1%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDY 66
++ G GK+ L + + + + +
Sbjct: 18 EVAFAGRSNAGKSSALNTLTNQKSLAR-TSKTPGRTQLINLFEVADGKRLVDLPGYGYAE 76
Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPN 126
+ S L + + P + + N L
Sbjct: 77 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTK 136
Query: 127 TIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
K L ++ A+ S+ K+GV ++ +
Sbjct: 137 ADK-LASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQK 182
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 31.5 bits (71), Expect = 0.028
Identities = 21/128 (16%), Positives = 38/128 (29%), Gaps = 18/128 (14%)
Query: 7 KLVIVGD-GACGKTCLLIVFSKDQFPEVY---VPTVFENYVADIEVDSKQVELALWDTAG 62
K+ +VG G G + +D EV +P ++ V + +
Sbjct: 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR 61
Query: 63 QEDYDRLRPLSYPDTDVILMCFSI------DSPDSLE---NIPEKWTPEVKHFCPNVPII 113
Q Y+ +DV+++ I D I E + + +
Sbjct: 62 QGGYEDTAG-----SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISL 116
Query: 114 LVGNKKDL 121
N DL
Sbjct: 117 TTSNPVDL 124
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.6 bits (70), Expect = 0.029
Identities = 29/171 (16%), Positives = 43/171 (25%), Gaps = 21/171 (12%)
Query: 9 VIVGDGACGKTCLLIVFSK------DQFPEVYVPTVFENYVADIEVDSKQVELALWDTAG 62
IVG GK+ LL P+ + L
Sbjct: 9 AIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMD 68
Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122
+ + DV + + +D E +K VPI+LVGNK D
Sbjct: 69 ALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAA 128
Query: 123 NDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
P + +P SA + V E+
Sbjct: 129 KYPEEAMKAYHELLPEAEP---------------RMLSALDERQVAELKAD 164
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 31.1 bits (70), Expect = 0.040
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 16/125 (12%)
Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDT--AGQE 64
KL ++G GA G T + E+ + + + V +D + G +
Sbjct: 3 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD 62
Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLE---------NIPEKWTPEVKHFCPNVPIILV 115
D + R D++++ NI + P + PN +L+
Sbjct: 63 DPEICRD-----ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI 117
Query: 116 GNKKD 120
N D
Sbjct: 118 TNPVD 122
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 29.7 bits (66), Expect = 0.12
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 16/134 (11%)
Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDT 60
+ RKK+ ++G G G T + ++ V V S + +
Sbjct: 3 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNV 62
Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSID------------SPDSLENIPE--KWTPEVKHF 106
+ + +Y L+ D +++ + + N + +K +
Sbjct: 63 SVRAEYSYEAALT--GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 120
Query: 107 CPNVPIILVGNKKD 120
CP II+V N D
Sbjct: 121 CPKTFIIVVTNPLD 134
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.3 bits (64), Expect = 0.22
Identities = 23/169 (13%), Positives = 45/169 (26%), Gaps = 16/169 (9%)
Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDR 68
IVG GK+ LL + + + DT G ++
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEK 68
Query: 69 LRPLSYPDTDVILMCFSIDS----PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124
+ ++ + P+ K P+IL NK D +
Sbjct: 69 RAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQE 128
Query: 125 PNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
+ + +A ++N + SA++ V +
Sbjct: 129 KADL------------LPHLQFLASQMNFLDIVPISAETGLNVDTIAAI 165
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 28.9 bits (64), Expect = 0.34
Identities = 12/82 (14%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELNKMKQE 137
D +++ ++ P++ I +K+ V + ++V NK DL D + ++++ ++++
Sbjct: 12 DQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDL-YDEDDLRKVRELEEI 68
Query: 138 PVKPEEGRAMAQKINAFAYLEC 159
+ K
Sbjct: 69 YSGLYPIVKTSAKTGMGIEELK 90
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 28.0 bits (62), Expect = 0.56
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 15/140 (10%)
Query: 43 VADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKW 99
A +E ++ + + D G DY + D ++ S P + E+I
Sbjct: 57 TAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLAR 116
Query: 100 TPEVKHFCPNVPIILVGNKKDLRNDPNTIKELNKMKQEPVKPEE---GRAMAQKINAFAY 156
V + I++ NK D+ +DP + + ++ + E + +A
Sbjct: 117 QVGVPY------IVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLA 170
Query: 157 LE---CSAKSKEGVREVFET 173
LE + K++ G E +
Sbjct: 171 LEQMHRNPKTRRGENEWVDK 190
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 27.7 bits (60), Expect = 0.73
Identities = 27/164 (16%), Positives = 48/164 (29%), Gaps = 9/164 (5%)
Query: 10 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQ-EDYDR 68
+VG GK+ LL ++ P + + S++ L D G E
Sbjct: 6 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 65
Query: 69 LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTI 128
+ L I + + P K ++ ++
Sbjct: 66 GKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPA--------LLRRPSL 117
Query: 129 KELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
LNK+ + + A A A L SA + G+ + E
Sbjct: 118 VALNKVDLLEEEAVKALADALAREGLAVLPVSALTGAGLPALKE 161
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 27.3 bits (59), Expect = 1.1
Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 29/153 (18%)
Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117
DT G E + LR D+ ++ I+ + P ++ N
Sbjct: 75 IDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNIL----RMYRTPFVVAAN 130
Query: 118 KKDLRND-------------------------PNTIKELNKMKQEPVKPEEGRAMAQKIN 152
K D + + + K+ +E + E + +
Sbjct: 131 KIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFAS 190
Query: 153 AFAYLECSAKSKEGVREVFETATRAALQVKKKK 185
+ + SA + EG+ E+ A Q +++
Sbjct: 191 QVSIIPISAITGEGIPELLTMLMGLAQQYLREQ 223
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 27.0 bits (58), Expect = 1.1
Identities = 27/165 (16%), Positives = 47/165 (28%), Gaps = 10/165 (6%)
Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDR 68
+IVG GK+ L K + V V+ L DT G D +
Sbjct: 4 LIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQ 63
Query: 69 LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTI 128
+ M D + + T E + + ++ +TI
Sbjct: 64 DIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLR----------KSTVDTI 113
Query: 129 KELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
NK + E + + + SA+ + + ET
Sbjct: 114 LVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLET 158
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 27.0 bits (58), Expect = 1.2
Identities = 19/175 (10%), Positives = 48/175 (27%), Gaps = 19/175 (10%)
Query: 7 KLVIVGDGACGKTCLL--------IVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALW 58
++ + G GK+ + + + + + + VD A
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 118
+ +E + R+ + + I + +P+I++ K
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRH-APSNDDVQMYEFLKYYGIPVIVIATK 143
Query: 119 KDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFET 173
D K ++Q + S+++K+G E +
Sbjct: 144 ADKIPKGKWDKHAKVVRQT----------LNIDPEDELILFSSETKKGKDEAWGA 188
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 27.0 bits (59), Expect = 1.4
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELNKMKQE 137
D ++ FS P + +++ V ++ I+ K DL D +T + ++
Sbjct: 12 DQAVLVFSAVQPSFSTALLDRFL--VLVEANDIQPIICITKMDLIEDQDTEDTIQAYAED 69
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 26.4 bits (57), Expect = 1.9
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 31/177 (17%)
Query: 10 IVGDGACGKTCLL--IVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQ-EDY 66
+VG + GK+ LL + +K + + + T+ N D + +A D G E
Sbjct: 6 LVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA--DLPGLIEGA 63
Query: 67 DRLRPL------SYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-----NVPIILV 115
+ L T VI+ + + + + T + P I+V
Sbjct: 64 HQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIV 123
Query: 116 GNKKDLRNDPNTIKELNKMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFE 172
NK D+ ++ + + SA ++EG+RE+
Sbjct: 124 ANKMDMPEAAENLEAFKEKLTDDYP---------------VFPISAVTREGLRELLF 165
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.1 bits (56), Expect = 2.5
Identities = 11/79 (13%), Positives = 19/79 (24%), Gaps = 15/79 (18%)
Query: 109 NVPIILVGNKKDLRNDPNTIKELNKM----KQEPVKPEEGRAMAQKINAFAY-------- 156
I NK DL ++ + +
Sbjct: 157 GATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPP 216
Query: 157 ---LECSAKSKEGVREVFE 172
L SAK++EG ++
Sbjct: 217 VRVLYLSAKTREGFEDLET 235
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 26.3 bits (57), Expect = 2.6
Identities = 16/139 (11%), Positives = 35/139 (25%), Gaps = 14/139 (10%)
Query: 7 KLVIVGDGACGKTCLL-IVFSKDQFPEVYVPTVFENYVADIEV--DSKQVELALWDTAGQ 63
+ + G+ GK+ + + E T + + WD G
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGI 117
Query: 64 EDY-----DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 118
L + + + D ++ + + +I + + V K
Sbjct: 118 GSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAK----AISMM--KKEFYFVRTK 171
Query: 119 KDLRNDPNTIKELNKMKQE 137
D E +E
Sbjct: 172 VDSDITNEADGEPQTFDKE 190
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 25.2 bits (54), Expect = 5.3
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIK-----ELN 132
D++ P S N P ++ N P I++ NK D + T + E
Sbjct: 17 DIVYELVDARIPMSSRN------PMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQ 70
Query: 133 KMKQEPVKPEEGRAMAQKINAFAYLECSAKSKEGVREVFETATRAAL 179
++ + G+ + Q + A + + + V A RA +
Sbjct: 71 GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALI 117
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 24.9 bits (53), Expect = 5.5
Identities = 11/106 (10%), Positives = 32/106 (30%), Gaps = 2/106 (1%)
Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQED 65
+K+ I G G C + + +++ F+ + + +A+ + ++
Sbjct: 3 EKIYIYGASGHGLVCEDVAKNMGYKECIFL-DDFKGMKFESTLPKYDFFIAIGNNEIRKK 61
Query: 66 -YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110
Y ++ + ++I I +E
Sbjct: 62 IYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKA 107
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 24.9 bits (54), Expect = 6.8
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 24/85 (28%)
Query: 6 KKLVIVGDGACGKTCLL---------------------IVFSKDQFPEVYVPTVFENYVA 44
+ L I G GKT LL QF + T+ EN +
Sbjct: 63 EMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCS---QFSWIMPGTIKENIIF 119
Query: 45 DIEVDSKQVELALWDTAGQEDYDRL 69
+ D + + + Q+D +
Sbjct: 120 GVSYDEYRYKSVVKACQLQQDITKF 144
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 24.6 bits (52), Expect = 7.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 7 KLVIVGDGACGKTCLL 22
K++I G+ GKT L+
Sbjct: 2 KIIITGEPGVGKTTLV 17
>d1rlra2 c.7.1.2 (A:222-748) R1 subunit of ribonucleotide reductase,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 525
Score = 24.9 bits (53), Expect = 8.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 83 CFSIDSPDSLENIPEKWTPEVKHF 106
C I+ DSL++I + VK+
Sbjct: 4 CVLIECGDSLDSINATSSAIVKYV 27
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS),
C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Length = 95
Score = 23.7 bits (51), Expect = 8.4
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 109 NVPIILVGNKKDLRNDPNTIKELNKMKQEPVKPEE 143
+V ++L N+ +K + + E ++ +
Sbjct: 54 GAKFTIVIGDQELENNKIDVKNMTTGESETIELDA 88
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 741,166
Number of extensions: 34358
Number of successful extensions: 363
Number of sequences better than 10.0: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 95
Length of query: 192
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 112
Effective length of database: 1,309,196
Effective search space: 146629952
Effective search space used: 146629952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.7 bits)