Query psy14755
Match_columns 184
No_of_seqs 126 out of 420
Neff 3.7
Searched_HMMs 29240
Date Fri Aug 16 19:49:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rlz_A DHS, deoxyhypusine synt 100.0 1.2E-46 4.2E-51 338.1 7.2 125 17-169 161-334 (369)
2 1sjd_A N-acylamino acid racema 47.3 16 0.00055 30.9 3.8 31 103-133 275-305 (368)
3 2zc8_A N-acylamino acid racema 46.8 16 0.00056 30.9 3.8 32 102-133 273-304 (369)
4 1r0m_A N-acylamino acid racema 46.4 17 0.00057 31.0 3.8 31 103-133 281-311 (375)
5 3bpq_A Antitoxin RELB3, RELB; 44.3 13 0.00046 25.1 2.2 30 20-49 5-34 (52)
6 3g5o_A Uncharacterized protein 38.8 80 0.0027 22.9 6.0 58 14-97 31-96 (108)
7 2chr_A Chloromuconate cycloiso 38.5 18 0.00063 30.6 2.8 49 85-133 249-311 (370)
8 1ceu_A Protein (HIV-1 regulato 35.2 25 0.00085 23.6 2.4 33 34-98 14-46 (51)
9 4gfi_A Mandelate racemase/muco 33.4 33 0.0011 28.7 3.5 32 103-134 260-291 (329)
10 3fm7_C Dynein intermediate cha 32.6 11 0.00037 22.4 0.3 15 153-167 11-25 (27)
11 3i6e_A Muconate cycloisomerase 28.8 42 0.0014 28.9 3.5 30 103-132 285-314 (385)
12 3fv9_G Mandelate racemase/muco 28.6 38 0.0013 29.3 3.1 30 103-132 285-314 (386)
13 3qld_A Mandelate racemase/muco 27.6 45 0.0015 28.9 3.5 30 103-132 282-311 (388)
14 2ox0_A JMJC domain-containing 27.4 55 0.0019 29.5 4.1 24 26-49 232-255 (381)
15 3fcp_A L-Ala-D/L-Glu epimerase 26.9 39 0.0013 29.1 2.9 49 85-133 254-316 (381)
16 3dgb_A Muconate cycloisomerase 26.7 39 0.0013 29.1 2.9 31 103-133 287-317 (382)
17 3my9_A Muconate cycloisomerase 26.5 35 0.0012 29.2 2.6 30 103-132 284-313 (377)
18 1chr_A Chloromuconate cycloiso 26.5 40 0.0014 28.7 2.9 49 85-133 249-311 (370)
19 3i4k_A Muconate lactonizing en 26.4 49 0.0017 28.4 3.5 30 103-132 287-316 (383)
20 3mwc_A Mandelate racemase/muco 26.1 50 0.0017 28.7 3.5 32 102-133 296-327 (400)
21 3eez_A Putative mandelate race 25.7 46 0.0016 28.6 3.2 49 84-132 246-308 (378)
22 2okt_A OSB synthetase, O-succi 25.4 53 0.0018 27.6 3.4 32 102-133 255-286 (342)
23 1r6w_A OSB synthase, O-succiny 25.4 53 0.0018 27.4 3.4 30 103-132 249-278 (322)
24 1wue_A Mandelate racemase/muco 24.6 55 0.0019 28.0 3.5 30 103-132 294-323 (386)
25 3gd6_A Muconate cycloisomerase 24.1 57 0.0019 28.2 3.5 31 103-133 280-310 (391)
26 2zad_A Muconate cycloisomerase 23.8 57 0.0019 27.3 3.3 31 103-133 276-306 (345)
27 4e8g_A Enolase, mandelate race 23.6 59 0.002 28.3 3.5 49 85-133 268-330 (391)
28 2ioj_A Hypothetical protein AF 23.4 35 0.0012 25.0 1.8 32 99-130 85-116 (139)
29 3da8_A Probable 5'-phosphoribo 23.4 49 0.0017 27.0 2.8 21 102-122 50-70 (215)
30 3bzy_B ESCU; auto cleavage pro 23.1 43 0.0015 23.8 2.1 27 102-132 30-56 (83)
31 3ijl_A Muconate cycloisomerase 22.3 65 0.0022 27.2 3.4 31 103-133 265-295 (338)
32 1jpd_X L-Ala-D/L-Glu epimerase 22.1 66 0.0023 26.8 3.4 31 103-133 262-292 (324)
33 4h2h_A Mandelate racemase/muco 22.0 63 0.0022 27.6 3.3 48 85-132 254-315 (376)
34 2b9s_B DNA topoisomerase I-lik 21.9 33 0.0011 23.9 1.2 28 82-115 12-39 (62)
35 3jva_A Dipeptide epimerase; en 21.8 69 0.0024 27.1 3.5 32 102-133 275-307 (354)
36 3rfo_A Methionyl-tRNA formyltr 21.7 1.1E+02 0.0038 26.1 4.8 24 101-124 49-73 (317)
37 1wuf_A Hypothetical protein LI 21.7 68 0.0023 27.6 3.5 30 103-132 294-323 (393)
38 1tkk_A Similar to chloromucona 21.2 66 0.0023 27.1 3.2 31 103-133 280-310 (366)
39 2p8b_A Mandelate racemase/muco 20.8 76 0.0026 26.7 3.5 31 103-133 279-309 (369)
40 3dg3_A Muconate cycloisomerase 20.7 61 0.0021 27.6 2.9 30 104-133 278-307 (367)
41 2pg1_I Cytoplasmic dynein 1 in 20.6 22 0.00077 21.9 0.1 15 153-167 16-30 (33)
42 2pge_A MENC; OSBS, NYSGXRC, PS 20.5 74 0.0025 27.1 3.4 31 103-133 303-333 (377)
43 3q45_A Mandelate racemase/muco 20.3 86 0.003 26.7 3.8 49 85-133 245-307 (368)
44 2xw6_A MGS, methylglyoxal synt 20.2 46 0.0016 25.6 1.8 19 100-118 93-111 (134)
No 1
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A*
Probab=100.00 E-value=1.2e-46 Score=338.05 Aligned_cols=125 Identities=51% Similarity=0.947 Sum_probs=118.4
Q ss_pred eEEEeeeeeeecCCchHHHHHHHHHHHHHHHHHHhhhccccccccccccCcccccccccccccCCCcccCHHHHHHHHhc
Q psy14755 17 IIVEIEVSKIVPNDNYCAFENWLMPILDTMLREQKETNSFGIHAGEWLSGQETTIPQHKQTDKLKGTVWTPSRIISRLGT 96 (184)
Q Consensus 17 ~~v~rigNv~VPndnY~~fE~~v~~ild~m~~eq~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S~sEfi~eLGk 96 (184)
-+++||||+||||||||+||+|+++++++|+++|++ ++..|||+||+++||+
T Consensus 161 ~ginRIgn~~ip~e~y~~~E~~i~~i~~~~~~~q~~----------------------------~~~~~s~~e~i~~lGk 212 (369)
T 1rlz_A 161 NGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNT----------------------------EGVKWTPSKMIARLGK 212 (369)
T ss_dssp TTEEEETTEEEETHHHHHHHHHHHHHHHHHHHHHHH----------------------------SCCCCCHHHHHHHHHH
T ss_pred cCCCcccceeeccHHHHHHHHHHHHHHHHHHHhhhc----------------------------cCCcCcHHHHHHHHhh
Confidence 478999999999999999999999999999988875 3567999999999999
Q ss_pred ccCCCchHHHHHHHCCCCeecCCCCchhHHHHHHHhhhcCCceeeeeccchhhhc-------------------------
Q psy14755 97 EINHEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQGTSMSF------------------------- 151 (184)
Q Consensus 97 ~IndE~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~q~~~~l~IDiv~D~~eln------------------------- 151 (184)
+|++|+|||||||||||||||||++|||+|+++|+|+++++++.||+++|+++++
T Consensus 213 ~i~~e~Sil~~Ayk~~VPVf~Pa~tDgsiG~~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a~ktG~iilGGGvpKh~i~~ 292 (369)
T 1rlz_A 213 EINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIAN 292 (369)
T ss_dssp HHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHHHHHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHH
T ss_pred hcCCCCcHHHHHHHcCCCEECCCcchhhHHHHHHHHhccCCceeeehHhhHHHHHHHHHhcccceEEEECCCcchHHHHh
Confidence 9999999999999999999999999999999999999988789999999999999
Q ss_pred ------------------------CCCCCCCcccCccchhhh
Q psy14755 152 ------------------------IHITPMTMVPYPKINKTF 169 (184)
Q Consensus 152 ------------------------s~~~p~e~v~~~ki~~~~ 169 (184)
|||||+||||||||+..-
T Consensus 293 a~l~r~G~dyaV~Itta~e~dGslSGA~p~EAvSWGKi~~~a 334 (369)
T 1rlz_A 293 ANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDA 334 (369)
T ss_dssp HHHTTTSBSEEEEEECCCSTTCCSTTCCHHHHHHHTSBCTTC
T ss_pred hhcccCCCCEEEEEecCCCCcCcccCCChhhhhccccccCCC
Confidence 999999999999997653
No 2
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=47.27 E-value=16 Score=30.93 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=26.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|..+|+|++||....|++|.....|-
T Consensus 275 ~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 305 (368)
T 1sjd_A 275 RVHDVCAAHGIPVWCGGMIETGLGRAANVAL 305 (368)
T ss_dssp HHHHHHHHTTCCEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEeCCccccHHHHHHHHHH
Confidence 4667788999999999999999998766553
No 3
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=46.75 E-value=16 Score=30.86 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=26.8
Q ss_pred chHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 102 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
--+...|.++|+|++||....|++|.....|-
T Consensus 273 ~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 304 (369)
T 2zc8_A 273 LRVHALAESAGIPLWMGGMLEAGVGRAHNLHL 304 (369)
T ss_dssp HHHHHHHHHTTCCEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEecCccccHHHHHHHHHH
Confidence 35677788999999999999999998766553
No 4
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=46.43 E-value=17 Score=30.97 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=26.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|..+|+|++||....|++|.....|-
T Consensus 281 ~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 311 (375)
T 1r0m_A 281 RVHDVAQSFGAPVWCGGMLESGIGRAHNIHL 311 (375)
T ss_dssp HHHHHHHHTTCCEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEecCccccHHHHHHHHHH
Confidence 4667788999999999999999998766553
No 5
>3bpq_A Antitoxin RELB3, RELB; protein toxin-antitoxin complex; 2.20A {Methanocaldococcus jannaschii}
Probab=44.32 E-value=13 Score=25.10 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=19.9
Q ss_pred EeeeeeeecCCchHHHHHHHHHHHHHHHHH
Q psy14755 20 EIEVSKIVPNDNYCAFENWLMPILDTMLRE 49 (184)
Q Consensus 20 ~rigNv~VPndnY~~fE~~v~~ild~m~~e 49 (184)
.||--|++|-+.|.++|++-..=|-+..+|
T Consensus 5 ~~i~kvii~~~~fekieEiED~GL~kaM~E 34 (52)
T 3bpq_A 5 KRFKKFFISRKEYEKIEEILDIGLAKAMEE 34 (52)
T ss_dssp ---CCCEECHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHhheecHHHHHHHHHHHHHHHHHHHHH
Confidence 478889999999999999944334444344
No 6
>3g5o_A Uncharacterized protein RV2865; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=38.80 E-value=80 Score=22.91 Aligned_cols=58 Identities=14% Similarity=0.258 Sum_probs=35.5
Q ss_pred ccceEEEee---eeeeecCCchHHHHHHHH-----HHHHHHHHHHhhhccccccccccccCcccccccccccccCCCccc
Q psy14755 14 TLPIIVEIE---VSKIVPNDNYCAFENWLM-----PILDTMLREQKETNSFGIHAGEWLSGQETTIPQHKQTDKLKGTVW 85 (184)
Q Consensus 14 ~~~~~v~ri---gNv~VPndnY~~fE~~v~-----~ild~m~~eq~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.=|++|.|= -=|+++-+.|..+++-+. .+...+.+..++ -..|...
T Consensus 31 ~epViITr~G~~~aVl~s~e~ye~l~etl~LL~~~~~~~~L~~a~~~--------------------------~~~G~~~ 84 (108)
T 3g5o_A 31 QDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADAD--------------------------IASGRTY 84 (108)
T ss_dssp SCEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTSTTHHHHHHHHHHH--------------------------HHHTCEE
T ss_pred CCcEEEEECCCCcEEEecHHHHHHHHHHHHHhcChHHHHHHHHHHHH--------------------------HHcCCCc
Confidence 348888873 336669999988777543 133444322111 0024567
Q ss_pred CHHHHHHHHhcc
Q psy14755 86 TPSRIISRLGTE 97 (184)
Q Consensus 86 S~sEfi~eLGk~ 97 (184)
|..|+..+||-+
T Consensus 85 s~eev~~~lgl~ 96 (108)
T 3g5o_A 85 GEDEIRAEFGVP 96 (108)
T ss_dssp CHHHHHHHHTCC
T ss_pred CHHHHHHHhCCC
Confidence 999999999953
No 7
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=38.46 E-value=18 Score=30.55 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=35.6
Q ss_pred cCHHHHHHHHhcc----cCC----------CchHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 85 WTPSRIISRLGTE----INH----------EDSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 85 ~S~sEfi~eLGk~----Ind----------E~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
++..+|...+-.. ++. -.-|...|..+|+|+++++...|++|....+|-
T Consensus 249 ~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~i~~aa~~hl 311 (370)
T 2chr_A 249 STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQL 311 (370)
T ss_dssp CSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccHHHHHHHHHH
Confidence 5677777666432 222 134667788999999999999999999887764
No 8
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=35.16 E-value=25 Score=23.64 Aligned_cols=33 Identities=21% Similarity=0.537 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccccCcccccccccccccCCCcccCHHHHHHHHhccc
Q psy14755 34 AFENWLMPILDTMLREQKETNSFGIHAGEWLSGQETTIPQHKQTDKLKGTVWTPSRIISRLGTEI 98 (184)
Q Consensus 34 ~fE~~v~~ild~m~~eq~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~S~sEfi~eLGk~I 98 (184)
-+.+|+.++|++|-.|- ..-.+++++..||.+|
T Consensus 14 P~~eW~le~LeElk~EA--------------------------------vrHFpr~~L~~lgqyi 46 (51)
T 1ceu_A 14 PYNDWTLELLEELKNEA--------------------------------VRHFPRIWLHSLGQHI 46 (51)
T ss_dssp TTSHHHHHHHHHHHHHT--------------------------------TTSCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHH--------------------------------HHhCCHHHHHHHHHHH
Confidence 35689999999995441 2368999999999876
No 9
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=33.41 E-value=33 Score=28.72 Aligned_cols=32 Identities=16% Similarity=-0.046 Sum_probs=27.7
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHSF 134 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~q 134 (184)
-|...|..+|+||.+-+...|++|....+|--
T Consensus 260 ~i~~~A~~~gi~~~~~~~~es~i~~aa~~~la 291 (329)
T 4gfi_A 260 VMKAEAERLGFTIMVGCMLGTSLGMAPAVLVA 291 (329)
T ss_dssp HHHHHHHHTTCEEEECCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEECCcchhHHHHHHHHHHH
Confidence 46778899999999999999999998887753
No 10
>3fm7_C Dynein intermediate chain, cytosolic; cytoplasmic dynein, light chain tctex-1, tctex, light chain intermediate chain; 3.50A {Drosophila melanogaster}
Probab=32.57 E-value=11 Score=22.44 Aligned_cols=15 Identities=27% Similarity=0.490 Sum_probs=11.9
Q ss_pred CCCCCCcccCccchh
Q psy14755 153 HITPMTMVPYPKINK 167 (184)
Q Consensus 153 ~~~p~e~v~~~ki~~ 167 (184)
.++|+|.|+|.|--.
T Consensus 11 nipPkE~V~YsKeTQ 25 (27)
T 3fm7_C 11 NIPPKETLVYTKQTQ 25 (27)
T ss_dssp EECCCCCCCEEEEEE
T ss_pred ccCCcceeEEeeecc
Confidence 368999999998543
No 11
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=28.81 E-value=42 Score=28.94 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=26.3
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-|...|..+|+|+++.+...|++|....+|
T Consensus 285 ~i~~~A~~~gi~~~~~~~~es~i~~aa~~h 314 (385)
T 3i6e_A 285 TVARIAAAHGLMAYGGDMFEAGLAHLAGTH 314 (385)
T ss_dssp HHHHHHHHTTCEEEECCCSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEeCCCCccHHHHHHHHH
Confidence 377789999999999999999999988776
No 12
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=28.57 E-value=38 Score=29.32 Aligned_cols=30 Identities=10% Similarity=-0.032 Sum_probs=26.4
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-|...|..+|+|+.+++...|++|....+|
T Consensus 285 ~i~~~A~~~gi~~~~~~~~es~i~~aa~~h 314 (386)
T 3fv9_G 285 RQRAIAAAAGMVMSVQDTVGSQISFAAILH 314 (386)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEeCCCCCCHHHHHHHHH
Confidence 467789999999999999999999987766
No 13
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=27.62 E-value=45 Score=28.92 Aligned_cols=30 Identities=7% Similarity=0.050 Sum_probs=25.7
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-|...|..+|+|+.|.+...|++|....+|
T Consensus 282 ~ia~~A~~~gi~~~~~~~~es~i~~aa~~~ 311 (388)
T 3qld_A 282 RALDVAGEAGMAAWVGGMYETGVGRVHGLI 311 (388)
T ss_dssp HHHHHHHHTTCEEEECCCCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEecCccchHHHHHHHHH
Confidence 477888999999999999999999876654
No 14
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=27.40 E-value=55 Score=29.45 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=20.3
Q ss_pred eecCCchHHHHHHHHHHHHHHHHH
Q psy14755 26 IVPNDNYCAFENWLMPILDTMLRE 49 (184)
Q Consensus 26 ~VPndnY~~fE~~v~~ild~m~~e 49 (184)
.||.++-.+||+.+...+.++...
T Consensus 232 ~VP~~~~~kfE~l~~~~~P~~~~~ 255 (381)
T 2ox0_A 232 SVPPEHGKRLERLAKGFFPGSAQS 255 (381)
T ss_dssp EECGGGHHHHHHHHHHHSHHHHHH
T ss_pred ecCHHHHHHHHHHHHHhChhhhhc
Confidence 479998899999999988877655
No 15
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=26.93 E-value=39 Score=29.07 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=35.9
Q ss_pred cCHHHHHHHHhcc----cC----------CCchHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 85 WTPSRIISRLGTE----IN----------HEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 85 ~S~sEfi~eLGk~----In----------dE~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
++..+|...+-.. ++ .-.-|...|..+|+|+++.+...|++|....+|-
T Consensus 254 ~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 316 (381)
T 3fcp_A 254 ATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGTVGTVASLHA 316 (381)
T ss_dssp CSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccHHHHHHHHHH
Confidence 5677776666421 11 2234667889999999999999999999988763
No 16
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=26.71 E-value=39 Score=29.11 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=26.6
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-|...|..+|+|+++.+...|++|....+|-
T Consensus 287 ~i~~~A~~~gi~~~~~~~~es~ig~aa~~hl 317 (382)
T 3dgb_A 287 RTAAIAEAAGIGLYGGTMLEGGIGTLASAHA 317 (382)
T ss_dssp HHHHHHHHHTCEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEeecCCCccHHHHHHHHHH
Confidence 4567888999999999999999999888763
No 17
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=26.54 E-value=35 Score=29.20 Aligned_cols=30 Identities=17% Similarity=0.154 Sum_probs=25.7
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-|...|.++|+|+++.+...|++|.....|
T Consensus 284 ~i~~~a~~~gi~~~~~~~~es~i~~aa~~h 313 (377)
T 3my9_A 284 SLMAIADTAGLPGYGGTLWEGGIALAAGTQ 313 (377)
T ss_dssp HHHHHHHHHTCCEECCEECCSHHHHHHHHH
T ss_pred HHHHHHHHcCCeEecCCCCCcHHHHHHHHH
Confidence 456778899999999889999999988776
No 18
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=26.49 E-value=40 Score=28.74 Aligned_cols=49 Identities=12% Similarity=0.136 Sum_probs=35.5
Q ss_pred cCHHHHHHHHhcc----c--CC--------CchHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 85 WTPSRIISRLGTE----I--NH--------EDSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 85 ~S~sEfi~eLGk~----I--nd--------E~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
+++.++...+... + +. -.-|...|..+|+|+.+.+...|++|....+|-
T Consensus 249 ~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 311 (370)
T 1chr_A 249 STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQL 311 (370)
T ss_dssp CSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecCCCccHHHHHHHHHH
Confidence 6777777666431 1 11 123677888999999999999999999887763
No 19
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=26.39 E-value=49 Score=28.41 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=25.8
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-|...|..+|+|+.+.+...|++|....+|
T Consensus 287 ~ia~~A~~~gi~~~~~~~~es~i~~aa~~h 316 (383)
T 3i4k_A 287 KIAAIAEAGGLACHGATSLEGPIGTAASLQ 316 (383)
T ss_dssp HHHHHHHHTTCEEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEeCCCCccHHHHHHHHH
Confidence 366678999999999999999999987765
No 20
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=26.10 E-value=50 Score=28.75 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=27.0
Q ss_pred chHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 102 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
--|...|..+|+|+.+.+...|++|....+|-
T Consensus 296 ~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 327 (400)
T 3mwc_A 296 IKIYKIATDNGIKLWGGTMPESGLGARFLISL 327 (400)
T ss_dssp HHHHHHHHHTTCEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHH
Confidence 34677888999999999999999999877663
No 21
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=25.75 E-value=46 Score=28.62 Aligned_cols=49 Identities=16% Similarity=0.081 Sum_probs=35.8
Q ss_pred ccCHHHHHHHHhcc----cC----------CCchHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 84 VWTPSRIISRLGTE----IN----------HEDSICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 84 ~~S~sEfi~eLGk~----In----------dE~SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
.+++.++...+-.. ++ .-.-|...|..+|+|+.+++...|++|....+|
T Consensus 246 ~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~i~~aa~~h 308 (378)
T 3eez_A 246 LVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSVLADAEALH 308 (378)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHH
Confidence 36777777766321 11 123467789999999999999999999987765
No 22
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=25.42 E-value=53 Score=27.64 Aligned_cols=32 Identities=3% Similarity=-0.112 Sum_probs=27.3
Q ss_pred chHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 102 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
.-|...|..+|+|+.+-+..+|++|.....|-
T Consensus 255 ~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 286 (342)
T 2okt_A 255 QTAIDTLKSHGAKVVIGGMYEYGLSRYFTAML 286 (342)
T ss_dssp HHHHHHHHHTTCEEEEBCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEcCCcccHHHHHHHHHH
Confidence 45778899999999999889999999877664
No 23
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=25.42 E-value=53 Score=27.44 Aligned_cols=30 Identities=13% Similarity=-0.029 Sum_probs=25.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-+...|..+|+|+.+-+...|++|.....|
T Consensus 249 ~ia~~A~~~gi~~~~~~~~es~ig~aa~~h 278 (322)
T 1r6w_A 249 EQVQAAHALGLTAVISSSIESSLGLTQLAR 278 (322)
T ss_dssp HHHHHHHHTTCEEEEBCSSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECccccHHHHHHHHH
Confidence 455678999999999989999999877665
No 24
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=24.62 E-value=55 Score=28.00 Aligned_cols=30 Identities=10% Similarity=0.346 Sum_probs=25.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-+...|.++|+|+.|.+...|++|....+|
T Consensus 294 ~i~~~A~~~gi~~~~~~~~es~i~~aa~~h 323 (386)
T 1wue_A 294 KIAAFCQENDLLVWLGGMFESGVGRALNLQ 323 (386)
T ss_dssp HHHHHHHHTTCEEEECCCCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEECCCcccHHHHHHHHH
Confidence 466779999999999999999999876554
No 25
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=24.12 E-value=57 Score=28.16 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=26.8
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-|...|..+|+|+.+.+...|++|....+|-
T Consensus 280 ~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 310 (391)
T 3gd6_A 280 KAAYAAEVASKDVVLGTTQELSVGTAAMAHL 310 (391)
T ss_dssp HHHHHHHHTTCEEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEecCCCccHHHHHHHHHH
Confidence 4678889999999999989999999887764
No 26
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=23.79 E-value=57 Score=27.30 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=25.8
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|..+|+|+.+-+..+|++|.....|-
T Consensus 276 ~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 306 (345)
T 2zad_A 276 AIVEIAESSGLKLMIGCMGESSLGINQSVHF 306 (345)
T ss_dssp HHHHHHHTTTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHHH
Confidence 3566688999999999999999999877663
No 27
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=23.60 E-value=59 Score=28.26 Aligned_cols=49 Identities=12% Similarity=0.045 Sum_probs=35.3
Q ss_pred cCHHHHHHHHhcc----cC----------CCchHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 85 WTPSRIISRLGTE----IN----------HEDSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 85 ~S~sEfi~eLGk~----In----------dE~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
++..+|...+-.. ++ .-.-|...|..+|+|+.+.+...|++|....+|-
T Consensus 268 ~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 330 (391)
T 4e8g_A 268 EDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGGDIIAAACTHI 330 (391)
T ss_dssp CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCCHHHHHHHHHH
Confidence 5777777766321 21 1123677899999999999999999999877663
No 28
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=23.39 E-value=35 Score=24.96 Aligned_cols=32 Identities=6% Similarity=-0.023 Sum_probs=22.8
Q ss_pred CCCchHHHHHHHCCCCeecCCCCchhHHHHHH
Q psy14755 99 NHEDSICYWAAHNHIPIFSPALTDGSLGDMMY 130 (184)
Q Consensus 99 ndE~SILy~Aykn~VPVFcPAitDSSIG~~l~ 130 (184)
..+..++..|.++||||+.-...=..+-..+.
T Consensus 85 ~~~~~i~~~A~~~~ipvl~t~~~T~~~~~~l~ 116 (139)
T 2ioj_A 85 EPVQLVLTKAEERGVPVILTGHDTLTAVSRLE 116 (139)
T ss_dssp CCCHHHHHHHHHHTCCEEECSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEEECCCHHHHHHHHH
Confidence 46789999999999999986654433333333
No 29
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=23.37 E-value=49 Score=26.99 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=17.4
Q ss_pred chHHHHHHHCCCCeecCCCCc
Q psy14755 102 DSICYWAAHNHIPIFSPALTD 122 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAitD 122 (184)
.-.+..|.++|||+|+|-..+
T Consensus 50 a~~~~~A~~~gIp~~~~~~~~ 70 (215)
T 3da8_A 50 CRAAEIAAEASVPVFTVRLAD 70 (215)
T ss_dssp CHHHHHHHHTTCCEEECCGGG
T ss_pred hHHHHHHHHcCCCEEEeCccc
Confidence 356889999999999997653
No 30
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=23.05 E-value=43 Score=23.80 Aligned_cols=27 Identities=22% Similarity=0.159 Sum_probs=20.4
Q ss_pred chHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 102 DSICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
.-|..-|.+|||||+ .|-.+.-.|+..
T Consensus 30 ~~I~~~A~e~~VPi~----e~~~LAr~L~~~ 56 (83)
T 3bzy_B 30 LQIIKLAELYDIPVI----EDIPLARSLDKN 56 (83)
T ss_dssp HHHHHHHHHTTCCEE----ECHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEE----eCHHHHHHHHHh
Confidence 468889999999995 566666666643
No 31
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=22.30 E-value=65 Score=27.21 Aligned_cols=31 Identities=10% Similarity=-0.038 Sum_probs=27.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-|...|..+|+||.+-+...|++|....+|-
T Consensus 265 ~ia~~A~~~gi~~~~~~~~es~i~~aa~~~l 295 (338)
T 3ijl_A 265 KMVTLAHALGMRVMVGCMTETSCAISAASQF 295 (338)
T ss_dssp HHHHHHHHTTCEEEECCCSCCHHHHHHHHTT
T ss_pred HHHHHHHHcCCEEEecCCcccHHHHHHHHHH
Confidence 4577899999999999999999999988774
No 32
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=22.13 E-value=66 Score=26.82 Aligned_cols=31 Identities=6% Similarity=-0.110 Sum_probs=27.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|..+|+|+.+-+...|++|.....|-
T Consensus 262 ~i~~~A~~~g~~~~~~~~~es~i~~aa~~~l 292 (324)
T 1jpd_X 262 ALATEARAQGFSLMLGCMLCTSRAISAALPL 292 (324)
T ss_dssp HHHHHHHHTTCEEEECCCSCCHHHHHHHGGG
T ss_pred HHHHHHHHcCCcEEEeCcchHHHHHHHHHHH
Confidence 4667799999999999999999999988774
No 33
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=22.00 E-value=63 Score=27.60 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=34.8
Q ss_pred cCHHHHHHHHhcc----cCC----------CchHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 85 WTPSRIISRLGTE----INH----------EDSICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 85 ~S~sEfi~eLGk~----Ind----------E~SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
++..+|...+... ++. -.-|...|..+|+|+.|.+...|++|.....|
T Consensus 254 ~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~~~~~~i~~aa~~h 315 (376)
T 4h2h_A 254 TSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDDAWGGDIVSAACTH 315 (376)
T ss_dssp CSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBCSSCSHHHHHHHHH
T ss_pred CCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCCCCccHHHHHHHHH
Confidence 5677777666542 221 12466778899999999999999999887765
No 34
>2b9s_B DNA topoisomerase I-like protein; vanadate complex, isomerase/DNA complex; HET: DNA; 2.27A {Leishmania donovani}
Probab=21.93 E-value=33 Score=23.86 Aligned_cols=28 Identities=32% Similarity=0.570 Sum_probs=20.5
Q ss_pred CcccCHHHHHHHHhcccCCCchHHHHHHHCCCCe
Q psy14755 82 GTVWTPSRIISRLGTEINHEDSICYWAAHNHIPI 115 (184)
Q Consensus 82 ~~~~S~sEfi~eLGk~IndE~SILy~Aykn~VPV 115 (184)
...+++|.+- +| |+.=-++||.+++|||
T Consensus 12 ~vaLgTSKiN-----Yl-DPRItvaWcKr~~VPi 39 (62)
T 2b9s_B 12 AVSLGTSKIN-----YI-DPRIICSWAKAQDVPI 39 (62)
T ss_dssp EECCHHHHHH-----TS-CHHHHHHHHHHTTCCG
T ss_pred eEecccchhh-----cc-CchhhhhhhhhcCCCH
Confidence 3457777665 45 4556689999999997
No 35
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=21.80 E-value=69 Score=27.13 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=27.1
Q ss_pred chHHHHHHHCCCCeecCCCC-chhHHHHHHHhh
Q psy14755 102 DSICYWAAHNHIPIFSPALT-DGSLGDMMYFHS 133 (184)
Q Consensus 102 ~SILy~Aykn~VPVFcPAit-DSSIG~~l~~~~ 133 (184)
.-+...|..+|+|+.+.+.. .|++|.....|-
T Consensus 275 ~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hl 307 (354)
T 3jva_A 275 LKINQICETAGIECMIGCMAEETTIGITAAAHL 307 (354)
T ss_dssp HHHHHHHHHTTCEEEECCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCcccHHHHHHHHHH
Confidence 45677899999999999998 899998877663
No 36
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=21.75 E-value=1.1e+02 Score=26.10 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=19.3
Q ss_pred CchHHHHHHHCCCCeecC-CCCchh
Q psy14755 101 EDSICYWAAHNHIPIFSP-ALTDGS 124 (184)
Q Consensus 101 E~SILy~Aykn~VPVFcP-AitDSS 124 (184)
.+.+...|.++|||||.| .+.|..
T Consensus 49 ~~pv~~~A~~~gIpv~~~~~~~~~~ 73 (317)
T 3rfo_A 49 PTPVKVEAEKHGIPVLQPLRIREKD 73 (317)
T ss_dssp CCHHHHHHHHTTCCEECCSCTTSHH
T ss_pred CCHHHHHHHHcCCCEEccccCCCHH
Confidence 468999999999999998 454543
No 37
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=21.71 E-value=68 Score=27.56 Aligned_cols=30 Identities=17% Similarity=0.319 Sum_probs=24.8
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFH 132 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~ 132 (184)
-+...|..+|+|+.+-+...|++|....+|
T Consensus 294 ~ia~~A~~~gi~~~~~~~~es~i~~aa~~h 323 (393)
T 1wuf_A 294 KIAEYCALNEILVWCGGMLEAGVGRAHNIA 323 (393)
T ss_dssp HHHHHHHHTTCEEEECCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCcccHHHHHHHHH
Confidence 456678899999999999999999876554
No 38
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=21.24 E-value=66 Score=27.06 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=26.1
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|.++|+|+.+-+..+|++|....+|-
T Consensus 280 ~i~~~A~~~g~~~~~~~~~es~i~~~a~~~l 310 (366)
T 1tkk_A 280 KINAMAEACGVECMVGSMIETKLGITAAAHF 310 (366)
T ss_dssp HHHHHHHHHTCCEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEecCccccHHHHHHHHHH
Confidence 4567788999999999999999999877663
No 39
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=20.84 E-value=76 Score=26.71 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=26.3
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|.++|+|+.+-+...|++|....+|-
T Consensus 279 ~i~~~A~~~g~~~~~~~~~es~i~~~a~~~l 309 (369)
T 2p8b_A 279 KLAHQAEMAGIECQVGSMVESSVASSAGFHV 309 (369)
T ss_dssp HHHHHHHHTTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEecCCCccHHHHHHHHHH
Confidence 4667789999999999888999999877664
No 40
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=20.72 E-value=61 Score=27.60 Aligned_cols=30 Identities=13% Similarity=0.104 Sum_probs=25.5
Q ss_pred HHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 104 ICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 104 ILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
|...|..+|+|+.+.+...|++|....+|-
T Consensus 278 ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 307 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDGQIGTACTVSF 307 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEECCcCCcHHHHHHHHHH
Confidence 667799999999998888999998877654
No 41
>2pg1_I Cytoplasmic dynein 1 intermediate chain 2; dynein light chain, LC8, PIN, tctex1, structural protein; 2.80A {Rattus norvegicus}
Probab=20.61 E-value=22 Score=21.90 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=11.9
Q ss_pred CCCCCCcccCccchh
Q psy14755 153 HITPMTMVPYPKINK 167 (184)
Q Consensus 153 ~~~p~e~v~~~ki~~ 167 (184)
-++|+|.|+|-|--.
T Consensus 16 ~ipPkE~v~YsK~TQ 30 (33)
T 2pg1_I 16 DFPPREIVTYTKETQ 30 (33)
T ss_dssp EECCCCCCEEEEEEE
T ss_pred ccCCcceeEEecccc
Confidence 468999999988543
No 42
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=20.48 E-value=74 Score=27.11 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=25.9
Q ss_pred hHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 103 SICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 103 SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
-+...|..+|+|+.+.+...|++|....+|-
T Consensus 303 ~i~~~A~~~g~~~~~~~~~es~i~~~a~~hl 333 (377)
T 2pge_A 303 QWIELARERGIGFWITSALESNLGLAAIAQW 333 (377)
T ss_dssp HHHHHHHHTTCEEEEBCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEecCCcccHHHHHHHHHH
Confidence 4566888999999999999999999877653
No 43
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=20.31 E-value=86 Score=26.71 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=35.8
Q ss_pred cCHHHHHHHHhcc------cCC--------CchHHHHHHHCCCCeecCCCCchhHHHHHHHhh
Q psy14755 85 WTPSRIISRLGTE------INH--------EDSICYWAAHNHIPIFSPALTDGSLGDMMYFHS 133 (184)
Q Consensus 85 ~S~sEfi~eLGk~------Ind--------E~SILy~Aykn~VPVFcPAitDSSIG~~l~~~~ 133 (184)
+++.++...+... ++. -.-|...|..+|+|+.+-+...|++|....+|-
T Consensus 245 ~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~hl 307 (368)
T 3q45_A 245 CNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAAHV 307 (368)
T ss_dssp CSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccHHHHHHHHHH
Confidence 6777777766431 111 134677899999999998888999999877764
No 44
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.18 E-value=46 Score=25.64 Aligned_cols=19 Identities=5% Similarity=0.128 Sum_probs=16.3
Q ss_pred CCchHHHHHHHCCCCeecC
Q psy14755 100 HEDSICYWAAHNHIPIFSP 118 (184)
Q Consensus 100 dE~SILy~Aykn~VPVFcP 118 (184)
|...|.+.|-++|||+++-
T Consensus 93 D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 93 DVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp CSHHHHHHHHHHTCCEECS
T ss_pred hHHHHHHHHHHcCCCeEcC
Confidence 4567999999999999873
Done!