Query psy14758
Match_columns 134
No_of_seqs 152 out of 262
Neff 3.2
Searched_HMMs 29240
Date Fri Aug 16 19:52:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ogh_A Eukaryotic translation 100.0 2.8E-32 9.5E-37 198.5 9.2 95 5-131 1-95 (108)
2 2if1_A EIF1, SUI1; translation 100.0 6E-32 2.1E-36 202.7 6.2 97 5-131 15-113 (126)
3 2xzm_F EIF1; ribosome, transla 99.9 2E-23 6.7E-28 150.9 7.9 74 28-131 15-88 (101)
4 1d1r_A Hypothetical 11.4 KD pr 99.8 9.1E-20 3.1E-24 135.1 4.1 71 25-131 26-99 (116)
5 1in0_A YAJQ protein, HI1034; a 50.0 7.8 0.00027 30.1 2.0 27 41-68 92-118 (163)
6 3hrd_D Nicotinate dehydrogenas 41.1 8.1 0.00028 29.1 0.9 28 41-68 70-97 (160)
7 1nee_A EIF-2-beta, probable tr 39.5 21 0.00073 26.4 2.9 50 38-122 36-90 (138)
8 1k8b_A EIF-2-beta, probable tr 33.0 42 0.0014 21.1 3.1 29 38-68 3-36 (52)
9 3nvw_A Xanthine dehydrogenase/ 32.7 13 0.00046 28.2 0.9 28 41-68 80-108 (164)
10 2d74_B Translation initiation 32.3 42 0.0014 25.2 3.6 50 38-122 38-92 (148)
11 1dec_A Decorsin; blood coagula 30.0 12 0.00041 22.8 0.2 16 114-134 7-22 (39)
12 2diu_A KIAA0430 protein; struc 28.8 83 0.0029 22.0 4.4 23 46-68 12-34 (96)
13 1ffv_A CUTS, iron-sulfur prote 27.2 18 0.0006 27.2 0.7 27 42-68 71-97 (163)
14 1n62_A Carbon monoxide dehydro 24.7 22 0.00076 26.7 0.9 27 42-68 71-98 (166)
15 1lts_C Heat-labIle enterotoxin 21.3 40 0.0014 20.9 1.4 22 54-75 13-34 (41)
No 1
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-32 Score=198.53 Aligned_cols=95 Identities=44% Similarity=0.733 Sum_probs=87.4
Q ss_pred ccccCCCCCCcccccCCCCCCCCCCCeEEEEEeeeeCceeEEEEecCCCCcCHHHHHHHHHhhccccccccccccCCCCC
Q psy14758 5 VWSSDLFMLDPFADAFKGSEDDVQDGLVHIRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKKRFSTFYLSALSKCDPQK 84 (134)
Q Consensus 5 ~si~NL~sfDPFada~~~dd~~~eqq~IHIRiqQRngRK~VTtVEGL~~~~DLKKL~K~LKKkf~~~~~~~~~~~c~~~~ 84 (134)
|||+||++|||||++ +|+...+.++||||+++|||||+||+|+||+.++|+++|+|+||++| ||+
T Consensus 1 m~~~~~~~~dpf~~~--~~~~~~~~~~V~Ir~~~R~g~K~VT~V~Gl~~~~dlk~lak~lKkk~----------acg--- 65 (108)
T 2ogh_A 1 MSIENLKSFDPFADT--GDDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDF----------ACN--- 65 (108)
T ss_dssp CCSSCCSCCCCCCCC--CCCCCCCSCSEEEEEECCSSSCCEEEEECCCTTSCHHHHHHHHHHHH----------CCC---
T ss_pred CcccccCCCCccccc--cccccCCCCeEEEEEEEccCCceEEEEeCCCcchhHHHHHHHHHHHh----------cCc---
Confidence 789999999999998 44456788999999999999999999999999999999999999999 999
Q ss_pred ccceeeeecceEEeCchhhccCCCeEEEeecCCcccccchhhhhhcc
Q psy14758 85 VGTYKIFATETLVTSSELKLSLGNLFQASCLGVNRAGMLLKCFLCDK 131 (134)
Q Consensus 85 ~~~~~~~a~gt~~~~~~~~~~~~~~iq~~~qG~~r~~~~~~~~l~~~ 131 (134)
||++.+++ .|..||+ |||||..+ .+||.++
T Consensus 66 ---------gsV~~~~~----~g~~I~i--QGD~r~~v--~~~L~~~ 95 (108)
T 2ogh_A 66 ---------GNIVKDPE----MGEIIQL--QGDQRAKV--CEFMISQ 95 (108)
T ss_dssp ---------EEEECCTT----SSCEEEE--ESSCHHHH--HHHHHHH
T ss_pred ---------eEEecCCC----CceEEEE--cCCHHHHH--HHHHHHc
Confidence 99998766 3789999 99999999 9999865
No 2
>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1
Probab=99.97 E-value=6e-32 Score=202.66 Aligned_cols=97 Identities=46% Similarity=0.705 Sum_probs=88.6
Q ss_pred ccccCCCCCCcccccCCCCC--CCCCCCeEEEEEeeeeCceeEEEEecCCCCcCHHHHHHHHHhhccccccccccccCCC
Q psy14758 5 VWSSDLFMLDPFADAFKGSE--DDVQDGLVHIRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKKRFSTFYLSALSKCDP 82 (134)
Q Consensus 5 ~si~NL~sfDPFada~~~dd--~~~eqq~IHIRiqQRngRK~VTtVEGL~~~~DLKKL~K~LKKkf~~~~~~~~~~~c~~ 82 (134)
|+|+||.+|||||++.++|+ ...+.++||||+++|||||+||+|+||+.++|+|+|+|+||++| |||
T Consensus 15 ~~~~~~~~fdpfa~~~~~~~~~~~g~~~~V~Ir~~~R~grK~VT~V~GL~~~~dlk~laK~LKkk~----------acg- 83 (126)
T 2if1_A 15 SAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKF----------ACN- 83 (126)
T ss_dssp GGCSCCCCCCTTSSCCCCSSCCSCSCTTCEECCCCCSSSSCCBCEEBSCCTTSCHHHHHTTHHHHT----------CCC-
T ss_pred hhcccCCCCCchhhhccccccccCCCCCeEEEEEEeecCCccEEEEeCCCCchhHHHHHHHHHHHh----------cCC-
Confidence 56999999999999977663 35778999999999999999999999999999999999999999 999
Q ss_pred CCccceeeeecceEEeCchhhccCCCeEEEeecCCcccccchhhhhhcc
Q psy14758 83 QKVGTYKIFATETLVTSSELKLSLGNLFQASCLGVNRAGMLLKCFLCDK 131 (134)
Q Consensus 83 ~~~~~~~~~a~gt~~~~~~~~~~~~~~iq~~~qG~~r~~~~~~~~l~~~ 131 (134)
|||+..++ +|+.||+ |||||..+ ++||.++
T Consensus 84 -----------GtVk~~~e----~g~~I~I--QGD~r~~I--~~~L~~~ 113 (126)
T 2if1_A 84 -----------GTVIEHPE----YGEVIQL--QGDQRKNI--CQFLVEI 113 (126)
T ss_dssp -----------EEEECCTT----TSSEEEE--SBCCHHHH--HHHHHHH
T ss_pred -----------eEEecCCC----CccEEEE--cCCHHHHH--HHHHHHc
Confidence 99998766 4789999 99999999 9999875
No 3
>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F
Probab=99.89 E-value=2e-23 Score=150.93 Aligned_cols=74 Identities=35% Similarity=0.597 Sum_probs=69.7
Q ss_pred CCCeEEEEEeeeeCceeEEEEecCCCCcCHHHHHHHHHhhccccccccccccCCCCCccceeeeecceEEeCchhhccCC
Q psy14758 28 QDGLVHIRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKKRFSTFYLSALSKCDPQKVGTYKIFATETLVTSSELKLSLG 107 (134)
Q Consensus 28 eqq~IHIRiqQRngRK~VTtVEGL~~~~DLKKL~K~LKKkf~~~~~~~~~~~c~~~~~~~~~~~a~gt~~~~~~~~~~~~ 107 (134)
.+++||||+++|||||.||+|+||+.++|+|+|+|+||++| ||| |||+.+++ +|
T Consensus 15 ~~~~v~I~~~~R~g~K~VT~V~Gl~~~~dlk~laK~lKkk~----------acg------------gsV~~~~~----~g 68 (101)
T 2xzm_F 15 FQTHIHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWL----------SCN------------ATIVEEDE----GK 68 (101)
T ss_dssp CSCCEEEEEEEEETTEEEEEEECCCTTSCTHHHHHHHHHHH----------TSC------------CCEEECST----TC
T ss_pred CCCeEEEEEEeccCCccEEEEecCCCchhHHHHHHHHHHHh----------cCC------------eEEecCCC----Cc
Confidence 57899999999999999999999999999999999999999 999 99998876 47
Q ss_pred CeEEEeecCCcccccchhhhhhcc
Q psy14758 108 NLFQASCLGVNRAGMLLKCFLCDK 131 (134)
Q Consensus 108 ~~iq~~~qG~~r~~~~~~~~l~~~ 131 (134)
..||+ |||||..+ .+||.++
T Consensus 69 ~~I~i--QGD~r~~v--~~~L~~~ 88 (101)
T 2xzm_F 69 KVIKL--NGDHRNQI--QQFLSEE 88 (101)
T ss_dssp EEEEE--ESCCHHHH--HHHHHHH
T ss_pred eEEEE--eCcHHHHH--HHHHHHc
Confidence 89999 99999999 9999875
No 4
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=99.78 E-value=9.1e-20 Score=135.14 Aligned_cols=71 Identities=28% Similarity=0.430 Sum_probs=63.7
Q ss_pred CCCCCCeEEEEEeeeeCc--eeEEEEecCCC-CcCHHHHHHHHHhhccccccccccccCCCCCccceeeeecceEEeCch
Q psy14758 25 DDVQDGLVHIRIQQRNGR--KTLTTVQGLSS-EYDLKKIVRACKKKRFSTFYLSALSKCDPQKVGTYKIFATETLVTSSE 101 (134)
Q Consensus 25 ~~~eqq~IHIRiqQRngR--K~VTtVEGL~~-~~DLKKL~K~LKKkf~~~~~~~~~~~c~~~~~~~~~~~a~gt~~~~~~ 101 (134)
..+++++||||++ |+|| |.||+|+||+. ++|+++|+|+||++| ||| |||+
T Consensus 26 ~p~~~~~V~I~~e-r~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~----------acg------------GtVk---- 78 (116)
T 1d1r_A 26 RPKGDGVVRIQRQ-TSGRKGKGVCLITGVDLDDAELTKLAAELKKKC----------GCG------------GAVK---- 78 (116)
T ss_dssp --CCCCEEEEEEC-CCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSS----------SSC------------CBCC----
T ss_pred CCCCCCeEEEEEE-eCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHh----------cCC------------cEEc----
Confidence 4566899999999 8777 99999999997 999999999999999 999 9998
Q ss_pred hhccCCCeEEEeecCCcccccchhhhhhcc
Q psy14758 102 LKLSLGNLFQASCLGVNRAGMLLKCFLCDK 131 (134)
Q Consensus 102 ~~~~~~~~iq~~~qG~~r~~~~~~~~l~~~ 131 (134)
++.||+ |||||..+ .+||.++
T Consensus 79 -----~~~Iei--QGD~r~~i--~~~L~~~ 99 (116)
T 1d1r_A 79 -----DGVIEI--QGDKRDLL--KSLLEAK 99 (116)
T ss_dssp -----SSCEEE--CSCCHHHH--HHHHHHH
T ss_pred -----CCEEEE--eCcHHHHH--HHHHHHc
Confidence 468999 99999999 9999865
No 5
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=50.00 E-value=7.8 Score=30.10 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=22.4
Q ss_pred CceeEEEEecCCCCcCHHHHHHHHHhhc
Q psy14758 41 GRKTLTTVQGLSSEYDLKKIVRACKKKR 68 (134)
Q Consensus 41 gRK~VTtVEGL~~~~DLKKL~K~LKKkf 68 (134)
.|..+|+.|||+.+. -|+|+|.+|..-
T Consensus 92 vrq~~~lk~GI~~e~-AKkIvK~IKdsk 118 (163)
T 1in0_A 92 YSKEIKLKQGIETEM-AKKITKLVKDSK 118 (163)
T ss_dssp EEEEEEECCSCCHHH-HHHHHHHHHHHT
T ss_pred EEEEEEeecccCHHH-HHHHHHHHHhcC
Confidence 456899999999875 889999999765
No 6
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=41.10 E-value=8.1 Score=29.13 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=22.1
Q ss_pred CceeEEEEecCCCCcCHHHHHHHHHhhc
Q psy14758 41 GRKTLTTVQGLSSEYDLKKIVRACKKKR 68 (134)
Q Consensus 41 gRK~VTtVEGL~~~~DLKKL~K~LKKkf 68 (134)
-++.|||||||.++-.+.-|-++|-..-
T Consensus 70 ~G~~I~TiEgl~~~~~l~pvq~af~~~~ 97 (160)
T 3hrd_D 70 DESTIITLEGVAEDGKPSLLQQCFLEAG 97 (160)
T ss_dssp TTEEEECGGGTSBTTBCCHHHHHHHHHT
T ss_pred CCCceEEeCCCCCCCccCHHHHHHHHcC
Confidence 3588999999986545778888887765
No 7
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=39.46 E-value=21 Score=26.43 Aligned_cols=50 Identities=14% Similarity=0.120 Sum_probs=35.9
Q ss_pred eeeCceeEEEEecCCC-----CcCHHHHHHHHHhhccccccccccccCCCCCccceeeeecceEEeCchhhccCCCeEEE
Q psy14758 38 QRNGRKTLTTVQGLSS-----EYDLKKIVRACKKKRFSTFYLSALSKCDPQKVGTYKIFATETLVTSSELKLSLGNLFQA 112 (134)
Q Consensus 38 QRngRK~VTtVEGL~~-----~~DLKKL~K~LKKkf~~~~~~~~~~~c~~~~~~~~~~~a~gt~~~~~~~~~~~~~~iq~ 112 (134)
+|-|+| |+|..+.+ .=+.+-+.|+|-.+| +.. |++. ++..-+
T Consensus 36 ~~eG~k--Tvi~Nf~dIa~~L~R~p~hv~ky~~~EL----------Gt~------------g~id---------~~rlii 82 (138)
T 1nee_A 36 VIQGNR--TFIQNFREVADALNRDPQHLLKFLLREL----------GTA------------GNLE---------GGRAIL 82 (138)
T ss_dssp CEETTE--EEESCHHHHHHHHCSSHHHHHHHHHHHC----------CSC------------CCCB---------TTTEEE
T ss_pred EEECCc--EEEEcHHHHHHHHCCCHHHHHHHHHHHh----------CCc------------eeec---------CCEEEE
Confidence 345777 99998875 556788889999999 554 5554 346667
Q ss_pred eecCCccccc
Q psy14758 113 SCLGVNRAGM 122 (134)
Q Consensus 113 ~~qG~~r~~~ 122 (134)
+|.|....
T Consensus 83 --~G~~~~~~ 90 (138)
T 1nee_A 83 --QGKFTHFL 90 (138)
T ss_dssp --ESSCSSSH
T ss_pred --EeeeCHHH
Confidence 89888765
No 8
>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1
Probab=33.00 E-value=42 Score=21.06 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=22.6
Q ss_pred eeeCceeEEEEecCCC-----CcCHHHHHHHHHhhc
Q psy14758 38 QRNGRKTLTTVQGLSS-----EYDLKKIVRACKKKR 68 (134)
Q Consensus 38 QRngRK~VTtVEGL~~-----~~DLKKL~K~LKKkf 68 (134)
.|-|.| |+|..+.+ .=+.+-++|+|-++|
T Consensus 3 ~~eG~k--Tvi~Nf~~Ia~~L~R~p~hv~ky~~~EL 36 (52)
T 1k8b_A 3 LIEGNR--TIIRNFRELAKAVNRDEEFFAKYLLKET 36 (52)
T ss_dssp EEETTE--EEECCHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred EEEcCe--EEEECHHHHHHHHCCCHHHHHHHHHHHh
Confidence 466777 89988865 446778888999999
No 9
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=32.72 E-value=13 Score=28.24 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=21.4
Q ss_pred CceeEEEEecCCC-CcCHHHHHHHHHhhc
Q psy14758 41 GRKTLTTVQGLSS-EYDLKKIVRACKKKR 68 (134)
Q Consensus 41 gRK~VTtVEGL~~-~~DLKKL~K~LKKkf 68 (134)
-++.|||||||.+ +-.+.-|-++|-..-
T Consensus 80 ~G~~I~TiEGL~~~~~~lhpvQ~af~~~~ 108 (164)
T 3nvw_A 80 HHVAVTTVEGIGSTKTRLHPVQERIAKSH 108 (164)
T ss_dssp TTCEEECGGGTCCTTSCCCHHHHHHHHTT
T ss_pred CCcceEEecccCCCCCccCHHHHHHHHcC
Confidence 3588999999975 445778888887765
No 10
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=32.29 E-value=42 Score=25.17 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=34.2
Q ss_pred eeeCceeEEEEecCCC-----CcCHHHHHHHHHhhccccccccccccCCCCCccceeeeecceEEeCchhhccCCCeEEE
Q psy14758 38 QRNGRKTLTTVQGLSS-----EYDLKKIVRACKKKRFSTFYLSALSKCDPQKVGTYKIFATETLVTSSELKLSLGNLFQA 112 (134)
Q Consensus 38 QRngRK~VTtVEGL~~-----~~DLKKL~K~LKKkf~~~~~~~~~~~c~~~~~~~~~~~a~gt~~~~~~~~~~~~~~iq~ 112 (134)
+|-|+| |+|..+.+ .=+.+-++|+|-.+| +.. |++. ++..-+
T Consensus 38 ~~eGkK--Tvi~Nf~dIa~~L~R~p~hv~ky~~~EL----------Gt~------------g~id---------~~rlii 84 (148)
T 2d74_B 38 TIEGNK--TIIENFKDIADALNRDPQHLLKFLLREI----------ATA------------GTLE---------GRRVVL 84 (148)
T ss_dssp EEETTE--EEESCHHHHHHHHTCCSHHHHHHHHHHS----------CCC------------EEEE---------TTEEEE
T ss_pred EEecCe--EEEEcHHHHHHHHCCCHHHHHHHHHHHh----------CCc------------eeec---------CCEEEE
Confidence 445655 88887764 445677888888888 555 6665 356777
Q ss_pred eecCCccccc
Q psy14758 113 SCLGVNRAGM 122 (134)
Q Consensus 113 ~~qG~~r~~~ 122 (134)
+|.|....
T Consensus 85 --~G~~~~~~ 92 (148)
T 2d74_B 85 --QGRFTPYL 92 (148)
T ss_dssp --SSCCCHHH
T ss_pred --EeeeCHHH
Confidence 89887665
No 11
>1dec_A Decorsin; blood coagulation; NMR {Macrobdella decora} SCOP: g.3.15.2
Probab=29.99 E-value=12 Score=22.82 Aligned_cols=16 Identities=38% Similarity=0.991 Sum_probs=12.5
Q ss_pred ecCCcccccchhhhhhcccCC
Q psy14758 114 CLGVNRAGMLLKCFLCDKRSC 134 (134)
Q Consensus 114 ~qG~~r~~~~~~~~l~~~~~~ 134 (134)
||||..++- ||.|.+|
T Consensus 7 cqgddqekc-----lcnkdec 22 (39)
T 1dec_A 7 CQGDDQEKC-----LCNKDEC 22 (39)
T ss_dssp CCSSCSSCE-----ESSSSEE
T ss_pred ccCcchhhc-----cccCCCC
Confidence 699988776 7787776
No 12
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.82 E-value=83 Score=22.00 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=20.0
Q ss_pred EEEecCCCCcCHHHHHHHHHhhc
Q psy14758 46 TTVQGLSSEYDLKKIVRACKKKR 68 (134)
Q Consensus 46 TtVEGL~~~~DLKKL~K~LKKkf 68 (134)
-.|.+||.+.+.+.|-+.|+.-|
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF 34 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLS 34 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHH
Confidence 34899999999998888888888
No 13
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=27.19 E-value=18 Score=27.20 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=21.0
Q ss_pred ceeEEEEecCCCCcCHHHHHHHHHhhc
Q psy14758 42 RKTLTTVQGLSSEYDLKKIVRACKKKR 68 (134)
Q Consensus 42 RK~VTtVEGL~~~~DLKKL~K~LKKkf 68 (134)
++.|||||||...-.+.-+-++|-..-
T Consensus 71 G~~I~TiEgL~~~~~l~pvq~a~~~~~ 97 (163)
T 1ffv_A 71 GSEVLTVEGLANKGVLHAVQEGFYKEH 97 (163)
T ss_dssp TCEEECGGGTSBTTBCCHHHHHHHHTT
T ss_pred CceEEEECCCCCCCCcCHHHHHHHHhC
Confidence 578999999986545777888877765
No 14
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=24.69 E-value=22 Score=26.70 Aligned_cols=27 Identities=15% Similarity=0.354 Sum_probs=20.8
Q ss_pred ceeEEEEecCCC-CcCHHHHHHHHHhhc
Q psy14758 42 RKTLTTVQGLSS-EYDLKKIVRACKKKR 68 (134)
Q Consensus 42 RK~VTtVEGL~~-~~DLKKL~K~LKKkf 68 (134)
++.|||||||.. +-.+.-+-++|-..-
T Consensus 71 G~~V~TiEgL~~~~~~~~pvq~a~~~~~ 98 (166)
T 1n62_A 71 GASITTIEGMAAPDGTLSALQEGFRMMH 98 (166)
T ss_dssp TCEEECGGGSSCTTSCCCHHHHHHHHTT
T ss_pred CceEEEeCCCCCcCCccCHHHHHHHHcC
Confidence 578999999985 445777888877665
No 15
>1lts_C Heat-labIle enterotoxin, subunit A; 1.95A {Escherichia coli} SCOP: d.166.1.1 PDB: 1ltt_C* 1ltb_C
Probab=21.32 E-value=40 Score=20.89 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=17.2
Q ss_pred CcCHHHHHHHHHhhcccccccc
Q psy14758 54 EYDLKKIVRACKKKRFSTFYLS 75 (134)
Q Consensus 54 ~~DLKKL~K~LKKkf~~~~~~~ 75 (134)
.+||.+.-|.+|+++|++|..|
T Consensus 13 ~~~L~~fkk~vKRq~~~~~~~s 34 (41)
T 1lts_C 13 TIYLREYQSKVKRQIFSDYQSE 34 (41)
T ss_dssp HHHHHHHHHHHHHHHGGGGCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3578888899999998777655
Done!