BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14767
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C031|LRC4C_MOUSE Leucine-rich repeat-containing protein 4C OS=Mus musculus GN=Lrrc4c
PE=1 SV=2
Length = 640
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 29/199 (14%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V +CP CSC + K V C+ +N +P+GI +T++L+L N I +++ F +
Sbjct: 42 VRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHL 99
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAH 135
+++ L L + + ++ AF G+ N++ L+L DN L+T+P + +Y+ LK + L +
Sbjct: 100 --RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 157
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGID-------------------- 174
NPI I SY+F P +R +D+ + + SE AF G+
Sbjct: 158 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTP 217
Query: 175 --KIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 218 LIKLDELDLSGNHLSAIRP 236
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 33 AGKRTVECIDRNFYTIPEGIDL---DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
>sp|Q9HCJ2|LRC4C_HUMAN Leucine-rich repeat-containing protein 4C OS=Homo sapiens GN=LRRC4C
PE=1 SV=1
Length = 640
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 29/199 (14%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V +CP CSC + K V C+ +N +P+GI +T++L+L N I +++ F +
Sbjct: 42 VRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHL 99
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAH 135
+++ L L + + ++ AF G+ N++ L+L DN L+T+P + +Y+ LK + L +
Sbjct: 100 --RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 157
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGID-------------------- 174
NPI I SY+F P +R +D+ + + SE AF G+
Sbjct: 158 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTP 217
Query: 175 --KIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 218 LIKLDELDLSGNHLSAIRP 236
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 33 AGKRTVECIDRNFYTIPEGIDL---DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
>sp|Q9NT99|LRC4B_HUMAN Leucine-rich repeat-containing protein 4B OS=Homo sapiens GN=LRRC4B
PE=2 SV=3
Length = 713
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 29/195 (14%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP+ CSC +A + V C R+ +P I ++T+ L+L N I V++ + F + +
Sbjct: 56 SCPVACSCSNQASR--VICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHL--RH 111
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYG----------------------IDKI 176
I SY+F P +R +D+ + + I AF G + ++
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRL 231
Query: 177 DTLKLNGNKLASLKP 191
+ L+L+GN+L ++P
Sbjct: 232 EELELSGNRLDLIRP 246
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQV--LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ L L +N I + F + + ++++L L + K L
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 195
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 255
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 256 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 292
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 234 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 291
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 292 LPHDLFTPLHRLERVHLNHNPWH 314
>sp|P0CC10|LRC4B_RAT Leucine-rich repeat-containing protein 4B OS=Rattus norvegicus
GN=Lrrc4b PE=1 SV=1
Length = 709
Score = 87.8 bits (216), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 29/195 (14%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N+I V++ + F + +
Sbjct: 58 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHL--RH 113
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYG----------------------IDKI 176
I SY+F P +R +D+ + + I AF G + ++
Sbjct: 174 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRL 233
Query: 177 DTLKLNGNKLASLKP 191
+ L+L+GN+L ++P
Sbjct: 234 EELELSGNRLDLIRP 248
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQV--LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ L L +N I + F + + ++++L L + K L
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 197
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 257
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 258 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 294
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 236 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 293
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 294 LPHDLFTPLHRLERVHLNHNPWH 316
>sp|P0C192|LRC4B_MOUSE Leucine-rich repeat-containing protein 4B OS=Mus musculus GN=Lrrc4b
PE=1 SV=1
Length = 709
Score = 87.8 bits (216), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 29/195 (14%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N+I V++ + F + +
Sbjct: 58 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHL--RH 113
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYG----------------------IDKI 176
I SY+F P +R +D+ + + I AF G + ++
Sbjct: 174 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRL 233
Query: 177 DTLKLNGNKLASLKP 191
+ L+L+GN+L ++P
Sbjct: 234 EELELSGNRLDLIRP 248
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQV--LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ L L +N I + F + + ++++L L + K L
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 197
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 257
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 258 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 294
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 236 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 293
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 294 LPHDLFTPLHRLERVHLNHNPWH 316
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 13 TLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE 72
++L+ A+CP C+C +V+C +P GI + + LDL NNI + K
Sbjct: 24 SILSGPPAAACPTKCTCSAA----SVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM 79
Query: 73 IFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKS 130
F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L++ P L
Sbjct: 80 DF--AGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTR 137
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++L+ N I I +F+ G++ + + N I I AF + ++ L LN N ++ +
Sbjct: 138 LDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ V+C ++ IP + T L L+ N+I+VL+ + + N+
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKK-LPNL 559
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L +++ V + AF G + EL L+ N L T+ ++ + LK++ L N I
Sbjct: 560 RKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISC 619
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+S+ +F +R + + + +I TI AF + + T+ L N
Sbjct: 620 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L++ I+ ++ + F G + + + +C ++ V R + +D S+ L+ +P
Sbjct: 470 LANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTI--VDCSNQKLARIP 527
Query: 121 SLIYIP-YLKSINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
S ++P Y + L N I + + F+ P +R I++SN +I + AF G +
Sbjct: 528 S--HLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQE 585
Query: 179 LKLNGNKLASLKPRTW 194
L L GN+L ++ R +
Sbjct: 586 LMLTGNQLETMHGRMF 601
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 31/142 (21%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT-----------------------QVL 59
CP C+C + V C +R + +P+G+ D ++
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLI 780
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
DLS+N+I++L F M +++ L L +L + AF G+ ++ L L N +S+V
Sbjct: 781 DLSNNSISMLTNHTFSNM--SHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 120 PSLIY--IPYLKSINLAHNPIH 139
P + + L + L NP+H
Sbjct: 839 PEGSFNDLTSLSHLALGTNPLH 860
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I L N I I + +F ++ ID+S QI I +AF G+ + +L L GNK+ +
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 90 CKLEFVDDRAFRGVTNMD--------ELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIH 139
C VD R +G+T + E+ L N + ++P+ + Y LK I+++ N I
Sbjct: 286 CSNNIVDCRG-KGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQIS 344
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
I+ +FQ + + + +I I F G+ + L LN NK+ L+ T+
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 399
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 13 TLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE 72
++L+ A+CP C+C +V+C +P GI + + LDL NNI + K
Sbjct: 24 SILSGPPAAACPTKCTCSAA----SVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKM 79
Query: 73 IFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKS 130
F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L++ P L
Sbjct: 80 DF--TGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTR 137
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++L+ N I I +F+ G++ + + N I I AF + ++ L LN N ++ +
Sbjct: 138 LDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRI 196
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ V+C ++ IP + T L L+ N+I VL+ + + N+
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKK-LPNL 559
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L +++ V + AF G + EL L+ N L T+ ++ + LK++ L N I
Sbjct: 560 RKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISC 619
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+++ +F +R + + + +I TI AF + + T+ L N
Sbjct: 620 VNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L++ I+ ++ + F G + + + +C ++ V R + +D S+ LS +P
Sbjct: 470 LANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTI--VDCSNQKLSRIP 527
Query: 121 SLIYIP-YLKSINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
S ++P Y + L N I + + F+ P +R I++SN +I + AF G +
Sbjct: 528 S--HLPEYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQE 585
Query: 179 LKLNGNKLASLKPRTW 194
L L GN+L ++ R +
Sbjct: 586 LMLTGNQLETMHGRMF 601
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 31/142 (21%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT-----------------------QVL 59
CP C+C + V C +R +T+P+G+ D ++
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI 780
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
DLS+N+I++L F M +++ L L +L + AF G+ ++ L L N +S+V
Sbjct: 781 DLSNNSISMLTNHTFSNM--SHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 120 P--SLIYIPYLKSINLAHNPIH 139
P S + L + L NP+H
Sbjct: 839 PEGSFNDLTSLSHLALGINPLH 860
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC V+C + IP + + L N+I + F+Q
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQY--KK 332
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++++ + K ++ + AF+G+ ++ L L N ++ +P ++ + L+ + L N I+
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ +FQ + + + + ++ TI F + I TL L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I L N I I + +F ++ ID+S QI I +AF G+ + +L L GNK+ +
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 90 CKLEFVDDRAFRGVTNMD--------ELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIH 139
C VD R +G+T + E+ L N + ++P+ +I Y LK I+++ N I
Sbjct: 286 CSNNIVDCRG-KGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQIS 344
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
I+ +FQ + + + +I I F G+ + L LN NK+ L+ T+
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 399
>sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4 OS=Homo sapiens GN=LRRC4
PE=1 SV=2
Length = 653
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F + +
Sbjct: 45 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLH--H 100
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L +NPI
Sbjct: 101 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 160
Query: 140 QISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGIDKIDTLKL 181
I SY+F P + +D+ ++ I AF G+ + L L
Sbjct: 161 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTP 150
KLE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 183 KLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
>sp|Q99PH1|LRRC4_MOUSE Leucine-rich repeat-containing protein 4 OS=Mus musculus GN=Lrrc4
PE=1 SV=2
Length = 652
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F + +
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLH--H 99
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L +NPI
Sbjct: 100 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 140 QISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGIDKIDTLKL 181
I SY+F P + +D+ ++ I AF G+ + L L
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTP 150
KLE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 182 KLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLS 241
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 242 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
>sp|Q45R42|LRRC4_RAT Leucine-rich repeat-containing protein 4 OS=Rattus norvegicus
GN=Lrrc4 PE=1 SV=1
Length = 652
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F + +
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLH--H 99
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L +NPI
Sbjct: 100 LEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 140 QISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGIDKIDTLKL 181
I SY+F P + +D+ ++ I AF G+ + L L
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTP 150
KLE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 182 KLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLS 241
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 242 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 16 ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL 75
V CP GC+C +RTV CI +P+ + DTQ LDL N+I L F
Sbjct: 19 GGVQSVYCPAGCTCL----ERTVRCIRAKLSAVPK-LPQDTQTLDLRFNHIEELPANAF- 72
Query: 76 QMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINL 133
G+ + L+L +L ++ D A G+T + + L++N LS +P+ I+ +P L++I L
Sbjct: 73 -SGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFL 131
Query: 134 AHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+N I Q+ + F + P + + M N ++ + + F ++ + L+L+GN +
Sbjct: 132 ENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAI 184
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 56/234 (23%)
Query: 6 ILSVFLLTLLASVTQAS-----CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+L F L LL S + C CSC G R V+C + +PEG+ TQ LD
Sbjct: 7 LLCFFALGLLGSAGPSGAAPPLCAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALD 63
Query: 61 LSSNNINVLQKEIF--------LQM----------------------------------- 77
+S NNI L ++ F LQ+
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSE 123
Query: 78 ---GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSIN 132
G++ +Q L L + V + +F G+ + L L DN+L+ VP L +P L+++
Sbjct: 124 AIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALT 183
Query: 133 LAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
LA N I I ++F + + + + N +I ++ F G+D ++TL LN N L
Sbjct: 184 LALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL 237
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + D + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I I +FQ +R +D+S I I+S AF + I L ++ N+L S
Sbjct: 377 ISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 34 GKRTVECIDRNFYTI---PEGIDL--DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLR 88
G +E +D N+ + P+ I + L SN+I+V+ F G ++ ++L
Sbjct: 223 GLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAF--AGNPLLRTIHLY 280
Query: 89 KCKLEFVDDRAFRGVTNMDELDL-SDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQ 147
L FV + AF ++++ L + +L+ P+L +L+S+ L I I Q
Sbjct: 281 DNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQ 340
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ +R +D+S I + S F G ++ + L N+++ +K T+
Sbjct: 341 NQKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQRNQISLIKETTF 385
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 10 FLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
+L +L V +CP CSC TV+C ++P I +T+ LDL+ NNI +
Sbjct: 15 LVLAILNKVAPQACPAQCSCSGS----TVDCHGLALRSVPRNIPRNTERLDLNGNNITRI 70
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK 129
K F G+ +++ L L + K+ ++ AF+ + ++ L L+ N L P L+++ K
Sbjct: 71 TKTDF--AGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAK 128
Query: 130 --SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
++L+ N I I +F+ I+ + + QI I AF + ++ L LN N +
Sbjct: 129 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 188
Query: 188 SL 189
L
Sbjct: 189 RL 190
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ TV+C ++ IPE I T L L++N VL+ + +
Sbjct: 505 ACPEKCRCEGT----TVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 559
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 560 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 619
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 664
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ I L N I I +F +R ID+SN QI + +AF G+ +++L L GNK+
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 188 SL 189
L
Sbjct: 362 EL 363
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 31/144 (21%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT-----------------------Q 57
+ CP C+C V C ++ +P+GI D
Sbjct: 725 SRCPTECTCL----DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT 780
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
++DLS+N I+ L + F M T + L L +L + R F G+ ++ L L N +S
Sbjct: 781 LIDLSNNRISTLSNQSFSNM--TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Query: 118 TVPSLIY--IPYLKSINLAHNPIH 139
VP + + L + + NP++
Sbjct: 839 VVPEGAFNDLSALSHLAIGANPLY 862
Score = 33.5 bits (75), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 108 ELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTI 165
E+ L N + +P + PY L+ I+L++N I +++ +FQ + + + +I +
Sbjct: 304 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 363
Query: 166 YSEAFYGIDKIDTLKLNGNKLASLK 190
F G+ + L LN NK+ L+
Sbjct: 364 PKSLFEGLFSLQLLLLNANKINCLR 388
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
+F+ S + S + CP C+C V+C + IP + + L
Sbjct: 253 REFVCSGHQSFMAPSCSVLHCPAACTCS----NNIVDCRGKGLTEIPTNLPETITEIRLE 308
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL 122
N I V+ F ++++ L ++ + AF+G+ +++ L L N ++ +P
Sbjct: 309 QNTIKVIPPGAFSPY--KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP-- 364
Query: 123 IYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
KS+ F+ ++ + ++ +I+ + +AF + ++ L L
Sbjct: 365 ------KSL--------------FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY 404
Query: 183 GNKLASLKPRTWS 195
NKL ++ T+S
Sbjct: 405 DNKLQTIAKGTFS 417
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 782 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
>sp|Q9BXB1|LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Homo
sapiens GN=LGR4 PE=2 SV=2
Length = 951
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 51/215 (23%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF-------- 74
C CSC G R V+C + +PEG+ TQ LD+S NNI L ++ F
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEE 85
Query: 75 LQM--------------GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LQ+ G+ ++ L L+ +L+ V A RG++ + L L N +++VP
Sbjct: 86 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVP 145
Query: 121 S--------------------------LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
L +P L+++ LA N I I ++F + +
Sbjct: 146 EDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVV 205
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + N +I ++ F G+D ++TL LN N L
Sbjct: 206 LHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEF 240
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + + + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I+QI +FQ +R +D+S IH I+S AF + I L ++ N+L S
Sbjct: 377 IYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSF 428
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 83 QKLYLRKCKLEFVDDR---AFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNP 137
QK+ LR L + + R +F G ++E+ L N + + + + L+ ++L+ N
Sbjct: 342 QKM-LRTLDLSYNNIRDLPSFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNL 400
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
IH+I S +F + I +D+S ++ + +E G++ ++ LKL GN
Sbjct: 401 IHEIHSRAFATLGPITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 444
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 34 GKRTVECIDRNFYTI---PEGIDL--DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLR 88
G +E +D N+ + P+ I + L SN+I+V+ F G ++ ++L
Sbjct: 223 GLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAF--DGNPLLRTIHLY 280
Query: 89 KCKLEFVDDRAFR-----------------------GVTNMDELDLSDNLLSTVPSLI-- 123
L FV + AF G +++ L L+ +S++P+ +
Sbjct: 281 DNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQ 340
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
L++++L++N I + S F + I + QI+ I F G+ + L L+
Sbjct: 341 EQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSR 398
Query: 184 NKLASLKPRTWS 195
N + + R ++
Sbjct: 399 NLIHEIHSRAFA 410
>sp|Q9HBX8|LGR6_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 6 OS=Homo
sapiens GN=LGR6 PE=2 SV=3
Length = 967
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 48/213 (22%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL------ 75
+CP C C+ + +C + +P +D T LDLS NN+ LQ +F
Sbjct: 34 ACPAPCHCQEDGIMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFLE 93
Query: 76 -------------------------------QMG---------ITNIQKLYLRKCKLEFV 95
Q+G + ++Q L L + V
Sbjct: 94 ELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLV 153
Query: 96 DDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIR 153
+R+F G++++ L L DN L+ +P +L +P L+++ LA N I I Y+FQ+ +
Sbjct: 154 PERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLV 213
Query: 154 YIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ + N +I + + +F G+ ++TL LN NKL
Sbjct: 214 VLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKL 246
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G T+++ L L + + + + + + L+LS N + +PSL L+ I L HN
Sbjct: 326 GTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQHNR 385
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I + +F ++ +D+S I +I+ EAF + + L L N+L +L
Sbjct: 386 IWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTL 437
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N I+ + F +T++ L+L +++ + +F G+ N++ LDL+ N L
Sbjct: 189 QAMTLALNRISHIPDYAF--QNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKL 246
Query: 117 STVPSLI-YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F P ++ I + I + AF + K
Sbjct: 247 QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPK 306
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 307 LHTLSLNG 314
>sp|Q504C1|LRIT2_DANRE Leucine-rich repeat, immunoglobulin-like domain and transmembrane
domain-containing protein 2 OS=Danio rerio GN=lrit2 PE=2
SV=2
Length = 561
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+C F L VF +L S + C GCSC R++ C++ IP+G+ D +
Sbjct: 3 VCVLFHLIVF--CILISHISSECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIR 60
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
+ + ++ L + +F + ++ L+L + ++ ++ G+ N+ EL L N L +VP
Sbjct: 61 IEKSQLSELPEAVFSH--VKALKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVP 118
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAF 170
+ P LK ++L HN I + ++ + PG+ Y+D+S+ Q+ I + F
Sbjct: 119 WTAFEETPNLKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVF 170
>sp|Q3UVD5|LGR6_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 6 OS=Mus
musculus GN=Lgr6 PE=2 SV=1
Length = 967
Score = 73.6 bits (179), Expect = 8e-13, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 48/215 (22%)
Query: 20 QASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM-- 77
+ +CP C C+ + +C + +P +D T LDLS NN+ LQ +F +
Sbjct: 32 RPACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRF 91
Query: 78 --------------------GITNIQKLYLRKCKLE------------------------ 93
G+ +++ L L+ +L
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 94 FVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPG 151
V +R+F G++++ L L DN L+ +P +L +P L+++ LA N I I Y+FQ+
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTS 211
Query: 152 IRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ + + N +I + + +F G+ ++TL LN N+L
Sbjct: 212 LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL 246
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N+I + F +T++ L+L +++ V +F G+ N++ LDL+ N L
Sbjct: 189 QAMTLALNHIRHIPDYAF--QNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL 246
Query: 117 STVPSLI-YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F +P ++ I + I + AF + K
Sbjct: 247 QEFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSK 306
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 307 LHTLSLNG 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G T+++ L L + + + + + + L+LS N + +PSL L+ I L HN
Sbjct: 326 GTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLRHNR 385
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I + +F ++ +D+S I I+ EAF + + L L N+L +L
Sbjct: 386 IKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+ L N I + + F Q+G ++Q L L + + AF + ++ +LDL+DN L+T
Sbjct: 379 IGLRHNRIKEIGADTFSQLG--SLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTT 436
Query: 119 VPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDM 157
+P L + L + L N + ++S S P +R +++
Sbjct: 437 LP-LAGLGGLMHLKLKGN-LALSQAFSKDSFPKLRILEV 473
>sp|P24014|SLIT_DROME Protein slit OS=Drosophila melanogaster GN=sli PE=1 SV=2
Length = 1504
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
+T+A CP CSC V+C R ++P I D + L+L NN+ V+ + F ++
Sbjct: 68 ITEARCPRVCSCTG----LNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRL 123
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAH 135
T ++ L L ++ ++ +F+ + +++ L L++N L +P + L +++++
Sbjct: 124 --TKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISN 181
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
N I + F+ +R + + N QI + AF G+ +++ L LN N L SL
Sbjct: 182 NVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSL 235
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
+ CP C C+ TV+C R IP I L T L L+ N + + + +
Sbjct: 541 SDCPAMCHCEGT----TVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGR-LP 595
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIP--YLKSINLAHNPI 138
++ KL L++ +L ++ AF G +++ EL L +N + + + +++ LK++NL N I
Sbjct: 596 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 655
Query: 139 HQISSYSFQSTPGIRYIDMS----NCQIHTIY 166
+ SF+ + ++++ NC H +
Sbjct: 656 SCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 687
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L N+ L + F G+T + +C E R + +D + L++VP
Sbjct: 287 LKGQNVADLHDQEFKCSGLTEHAPM---ECGAENSCPHPCRCADGI--VDCREKSLTSVP 341
Query: 121 SLIYIPY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
+ +P + L N I ++ SF S +R ID+SN I I +A G+ ++ TL
Sbjct: 342 --VTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTL 399
Query: 180 KLNGNKLASL 189
L GNK+ L
Sbjct: 400 VLYGNKIKDL 409
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 53/143 (37%), Gaps = 32/143 (22%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQV------------------------ 58
CP C+C V C IP GI +T
Sbjct: 739 CPPSCTCTGT----VVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRHLRSLTR 794
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS+N I +L F + T + L + KL+ + A G+ N+ L L N +S
Sbjct: 795 LDLSNNQITILSNYTFANL--TKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISM 852
Query: 119 VP--SLIYIPYLKSINLAHNPIH 139
+P S + L I L NP++
Sbjct: 853 LPEGSFEDLKSLTHIALGSNPLY 875
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
+ SCP C C V+C +++ ++P + DT L L N I L + F
Sbjct: 315 AENSCPHPCRC----ADGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSF--SS 368
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
++++ L + + A G+ + L L N + +PS ++
Sbjct: 369 FRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVF 414
>sp|Q9Z2H4|LGR4_RAT Leucine-rich repeat-containing G-protein coupled receptor 4
OS=Rattus norvegicus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 51/212 (24%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF-------- 74
C CSC G R V+C + +PEG+ TQ LD+S NNI L ++ F
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFLEE 85
Query: 75 LQM--------------------------------------GITNIQKLYLRKCKLEFVD 96
LQ+ G++ +Q L L + V
Sbjct: 86 LQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVP 145
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ +F G+ + L L DN L+ VP L +P L+++ LA N I I ++F + +
Sbjct: 146 EDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVV 205
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ + N +I ++ F G+D ++TL LN N L
Sbjct: 206 LHLHNNKIKSLSQHCFDGLDNLETLDLNYNYL 237
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + D + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I I +FQ +R +D+S I I+S AF + I L ++ N+L S
Sbjct: 377 ISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 34 GKRTVECIDRNFYTI---PEGIDL--DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLR 88
G +E +D N+ + P+ I + L SN+I+V+ F G ++ ++L
Sbjct: 223 GLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAF--GGNPLLRTIHLY 280
Query: 89 KCKLEFVDDRAFRGVTNMDELDL-SDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQ 147
L FV + AF ++++ L + +L+ P+L +L+S+ L I I Q
Sbjct: 281 DNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQ 340
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ +R +D+S I + S F G ++ + L N+++ +K T+
Sbjct: 341 NQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIKENTF 385
>sp|Q9WVC1|SLIT2_RAT Slit homolog 2 protein (Fragment) OS=Rattus norvegicus GN=Slit2
PE=1 SV=3
Length = 766
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V +CP CSC TV+C +P I +T+ LDL+ NNI + K F
Sbjct: 23 VAPHACPAQCSCSGS----TVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDF--A 76
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK--SINLAH 135
G+ +++ L L + K+ ++ AF + ++ L L+ N L P L+++ K ++L+
Sbjct: 77 GLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSE 136
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
N I I +F+ I+ + + QI I AF + ++ L LN N + L
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL 190
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ TV+C ++ IP+ I T L L++N VL+ + +
Sbjct: 501 ACPEKCRCEGT----TVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 555
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 556 LRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 615
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 616 CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 660
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ I L N I I +F +R +D+SN QI + +AF G+ +++L L GNK+
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 188 SL 189
L
Sbjct: 366 EL 367
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 109 LDLSDNLLSTVPSLIYIP-YLKSINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIY 166
+D S+ L+ +P +IP Y + L +N + + F+ P +R I++SN +I I
Sbjct: 513 VDCSNQKLNKIPD--HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIE 570
Query: 167 SEAFYGIDKIDTLKLNGNKLASLKPRTW 194
AF G ++ + L N+L +++ + +
Sbjct: 571 EGAFEGASGVNEILLTSNRLENVQHKMF 598
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 108 ELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTI 165
E+ L N + +P + PY L+ ++L++N I +++ +FQ + + + +I +
Sbjct: 308 EIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 367
Query: 166 YSEAFYGIDKIDTLKLNGNKLASLK 190
F G+ + L LN NK+ L+
Sbjct: 368 PKSLFEGLFSLQLLLLNANKINCLR 392
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 32/175 (18%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP+ C+C V+C + IP + + L N+I V
Sbjct: 277 CPIACTC----SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRV-------------- 318
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+ AF + LDLS+N +S + + + L S+ L N I +
Sbjct: 319 ------------IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 366
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ F+ ++ + ++ +I+ + +AF + ++ L L NKL ++ T+S
Sbjct: 367 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 421
>sp|Q5RKR3|ISLR2_MOUSE Immunoglobulin superfamily containing leucine-rich repeat protein 2
OS=Mus musculus GN=Islr2 PE=1 SV=1
Length = 745
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C K + +C + +PEG+ + L LS+N I VL++ F+ +T
Sbjct: 19 ACPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFVN--VTQ 76
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIH 139
+ L+L ++ V+ A ++ + LDLS NL+S P L + L+ + + HN +
Sbjct: 77 VTSLWLAHSEVRTVESGALAVLSQLKNLDLSHNLISNFPWSDLRNLSALQLLKMNHNRLG 136
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + + P +R + ++N ++ T+ F + + L+L N
Sbjct: 137 SLPRDALGALPDLRSLRINNNRLRTLEPGTFDALSALSHLQLYHN 181
>sp|Q5M8M9|LRC52_MOUSE Leucine-rich repeat-containing protein 52 OS=Mus musculus GN=Lrrc52
PE=2 SV=1
Length = 314
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 15 LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF 74
+ V+ + CP C C+ + V CID + P I L+T+ L L++N I L
Sbjct: 18 MGLVSGSKCPNKCVCQ----DQEVACIDLHLTEYPADIPLNTRRLYLNNNKITSLPA--- 70
Query: 75 LQMG-ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSI 131
LQ+G ++++ L + ++ V D F G+ + LDLS N L+++ S + L +
Sbjct: 71 LQLGFLSDLVYLDCQNNRIREVMDYTFIGIFRLIYLDLSSNNLTSISPFSFSVLTNLVRL 130
Query: 132 NLAHNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
N++HNP + + Y F +T +RY+D+ N +H I F+ + + TL L+GN
Sbjct: 131 NISHNPHLLYLDKYVFANTTSLRYLDLRNTGLHIIDHNGFHHLVVLQTLYLSGN 184
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 33/200 (16%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL ++ S+ S CP C C + R+V C + + +PEGI DT++LDLS N I
Sbjct: 13 LLIVVGSILSGSASGCPQRCDCSPQ--DRSVLCHRKRYLDVPEGIPTDTRLLDLSKNRIK 70
Query: 68 VLQKEIF--------LQM--------------GITNIQKLYLRKCKLEFVDDRAFRGVTN 105
L ++ F L++ G+ N++ L LR +L+ + F G++N
Sbjct: 71 ALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGLSN 130
Query: 106 MDELDLSDN----LLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ 161
+ +LD+S+N LL + +Y LKS+ + N + IS +F+ + + + C
Sbjct: 131 LTQLDISENKIVILLDDMFQDLY--NLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCN 188
Query: 162 IHTIYSEAFYGIDKIDTLKL 181
+ ++ +EA + + TLKL
Sbjct: 189 LTSVPTEALSHLHGLITLKL 208
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ + LS++P ++ ++ YL+ +NL++NPI + ++ + Q+
Sbjct: 250 NLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQL 309
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ AF G++ + L ++ N L++L+
Sbjct: 310 SVVEPYAFRGLNHLKVLNVSSNYLSTLE 337
>sp|Q66HV9|LIG1B_DANRE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1-B OS=Danio rerio
GN=lingo1b PE=1 SV=1
Length = 622
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C + IL + L T+L+ + CP C C A +R+V C R T+PEGI +DT++LDL
Sbjct: 24 CWQPILILMLGTVLSG-SATGCPSRCECS--AQERSVVCHRRKLITLPEGIPIDTRLLDL 80
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR-------------------- 101
S N + + E FL ++ L L + + ++ AF
Sbjct: 81 SKNRLKAINPEEFLNY--PQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQL 138
Query: 102 ----GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYI 155
G++N+ LD+S+N + + ++ + LK + + N + IS +F + +
Sbjct: 139 GVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQL 198
Query: 156 DMSNCQIHTIYSEAFYGIDKIDTLKL 181
M C + ++ +EAF + + TLKL
Sbjct: 199 TMERCNLTSVPTEAFSHLHNLLTLKL 224
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 92 LEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIH---------- 139
LE + ++ G+ N+ L +++ L+ VP ++ ++ YL+ NL+ NPI
Sbjct: 254 LESLTAKSLHGL-NITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNL 312
Query: 140 --------------QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
I YSF+ +R +++S+ + T+ AF+ + ++TL L+ N
Sbjct: 313 LRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHSVGNLETLALHDNP 372
Query: 186 LA 187
LA
Sbjct: 373 LA 374
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 28/169 (16%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C +V+C +P GI + + LDL NNI + K F G+ N
Sbjct: 33 ACPTKCTCSAA----SVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDF--AGLKN 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQI 141
++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELL------------------ 128
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
FQSTP + +D+S QI I +AF GI + L+L+ N ++ ++
Sbjct: 129 ----FQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIE 173
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ V+C ++ IP + L L+ N ++VL+ + + N+
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKK-LPNL 559
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K++ V + AF G ++ EL L+ N L TV ++ + LK++ L N I
Sbjct: 560 RKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGC 619
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+S+ +F +R + + + +I TI AF + + T+ L N
Sbjct: 620 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L++ I+ ++ + F G + + + +C ++ V R + +D S+ L +P
Sbjct: 470 LANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTI--VDCSNQKLVRIP 527
Query: 121 SLIYIP-YLKSINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
S ++P Y+ + L N + + + F+ P +R I++SN +I + AF G +
Sbjct: 528 S--HLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQE 585
Query: 179 LKLNGNKLASLKPRTW 194
L L GN+L ++ R +
Sbjct: 586 LMLTGNQLETVHGRVF 601
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N I + ++ F GIT+++ L L + ++D AFR + +++ L L++N +S
Sbjct: 138 LDLSENQIQGIPRKAF--RGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISR 195
Query: 119 --VPSLIYIPYLKSINLAHN 136
V S ++P ++++ L N
Sbjct: 196 ILVTSFNHMPKIRTLRLHSN 215
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 101 RGVT-NMDELDLSDNLLSTVP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS 158
RG+ ++ EL L N L+ VP L + +L I+L++N I +++Y+F + + + +S
Sbjct: 748 RGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILS 807
Query: 159 NCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ I AF G+ + L L+GN ++S+
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT-----------------------QVL 59
CP C+C + V C ++ +P G+ D ++
Sbjct: 725 CPEQCTCM----ETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLI 780
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
DLS+N+I++L F M +++ L L +L + AF G+ ++ L L N +S+V
Sbjct: 781 DLSNNSISMLTNYTFSNM--SHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 120 PSLIY--IPYLKSINLAHNPIH 139
P + + L + L NP+H
Sbjct: 839 PEGSFNDLTSLSHLALGTNPLH 860
Score = 36.6 bits (83), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I L N I I + +F ++ ID+S QI I +AF G+ + +L L GNK+ +
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 108 ELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTI 165
E+ L N + +P+ + Y LK I+++ N I I+ +FQ + + + +I I
Sbjct: 311 EIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 166 YSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
F G+ + L LN NK+ L+ T+
Sbjct: 371 VKGLFDGLVSLQLLLLNANKINCLRVNTF 399
>sp|A8WHP9|LRRC3_DANRE Leucine-rich repeat-containing protein 3 OS=Danio rerio GN=lrrc3
PE=2 SV=1
Length = 266
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 5 FILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
I + L + SV +CP C C + V+C RN IP + DT L LSSN
Sbjct: 21 LIFRLLLAVICLSVPSFACPKSCHCSERNSLTVVQCSSRNLEEIPPDLPHDTVSLQLSSN 80
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVT-NMDELDLSDNLLSTVPSLI 123
+I + + F + +Q+L L + +E VD AF+GV+ ++ LDLS N + VP
Sbjct: 81 HITKIPNQAF--KNLPWLQELDLSRNAIETVDAGAFKGVSESLRTLDLSHNHMQGVPKEA 138
Query: 124 YIPYLKSINLAHNPIH 139
+ I+L++NP H
Sbjct: 139 FARLHAKISLSNNPWH 154
>sp|Q80XG9|LRRT4_MOUSE Leucine-rich repeat transmembrane neuronal protein 4 OS=Mus
musculus GN=Lrrtm4 PE=1 SV=2
Length = 590
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 5 FILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+L LL ++ + Q +CP C C K V C F IPE I +Q L L N
Sbjct: 16 LVLFPTLLLVMLTGAQRACPKNCRCDGK----IVYCESHAFADIPENISGGSQGLSLRFN 71
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
+I L+ F G+ + LYL + VD+ AF+G+ + EL LS N
Sbjct: 72 SIQKLKSNQF--AGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN---------- 119
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I HN +F P +R +D+S ++ T+ SE F G+ K+ L L N
Sbjct: 120 -----KITYLHNK-------TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSN 167
Query: 185 KLASLKPRTW 194
L ++ R +
Sbjct: 168 SLKTVPIRVF 177
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 33/178 (18%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVP-----------------------SLIYIPYL---KSINLAH 135
N+D LDL N L ++ + + P L +SI L
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
N I +S + + +D+S I I F + + L L+ NKL ++ T
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQET 296
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L S+ S CP C C A +R V C + F +PEGI +T+ LDL N I
Sbjct: 20 LLLMLGSILSGSATGCPPRCECS--AQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIK 77
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + ++ AF + N+ L L N L +P ++ +
Sbjct: 78 TLNQDEF--ANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 135
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 136 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 195
Query: 186 LASL 189
L S+
Sbjct: 196 LTSI 199
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 141 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 198
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P +L ++ L + L H I+ I YSF+ ++ +++S+ + T+ S YG++
Sbjct: 199 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLN 257
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ L+++P S+ ++ YL+ +NL++NPI I ++ I + Q+
Sbjct: 257 NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQL 316
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
T+ AF G++ + L ++GN L +L+
Sbjct: 317 TTVEPFAFRGLNYLRILNVSGNLLTTLE 344
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L + + R + + L+LS N + T+ S+++ + L+ I L +
Sbjct: 257 NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQL 316
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ ++F+ +R +++S + T+ AF+ + ++TL L+ N LA
Sbjct: 317 TTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLA 365
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL +F G+ N+ +L L KL ++ F G+ + ELDLS N L +
Sbjct: 175 LNLGWNSLVVLPDTVF--QGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS 232
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + +++P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 VKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N +ASL+PRT+
Sbjct: 293 HVLRLAHNAIASLRPRTF 310
Score = 50.4 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+LR + +++++ G++ + ELDL+ N L+ +P ++ + +L+ + L++
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 467
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + +S+ ++D+S+ + T+ F + ++ L L N L + P+
Sbjct: 468 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ 524
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L ++ V AF G+ N+ ++LS N L +
Sbjct: 319 LQLGHNRIRQLGERTF--EGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRS 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + + ++F G+R + + + I +I ++ G+ ++
Sbjct: 377 LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L PR
Sbjct: 437 LELDLTTNRLTHL-PR 451
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP+ C+C + +V C +N +P+ I + T+ L L NN++ + F ++
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAF--QNLS 98
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST--VPSLIYIPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L N L V + P L S++L+ N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 158
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ FQ + +++ + + F G+ + L L GNKL L+P
Sbjct: 159 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 211
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 52/187 (27%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS- 117
LDLS N + ++ +F+ + +QKLYL + + V AF G+ + LDLS N ++
Sbjct: 223 LDLSRNALRSVKANVFVHL--PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAG 280
Query: 118 ----TVPSLIYIP---------------------YLKSINLAHNPIHQISSYSFQSTPGI 152
T P L+ + +L+ + L HN I Q+ +F+ +
Sbjct: 281 LMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQL 340
Query: 153 RYIDMSNCQI------------------------HTIYSEAFYGIDKIDTLKLNGNKLAS 188
+ +++ QI ++ F G+DK+ +L L + L
Sbjct: 341 EVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGH 400
Query: 189 LKPRTWS 195
++ T++
Sbjct: 401 VRLHTFA 407
Score = 34.7 bits (78), Expect = 0.39, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 54 LDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSD 113
L VL L+ N I L+ F + +++L L ++ + +R F G+ ++ L L+D
Sbjct: 290 LGLHVLRLAHNAIASLRPRTFKDLHF--LEELQLGHNRIRQLGERTFEGLGQLEVLTLND 347
Query: 114 NLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY 171
N ++ V + + + +NL+ N + + FQ + + + + + + F
Sbjct: 348 NQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFA 407
Query: 172 GIDKIDTLKLNGNKLASLKPRT 193
G+ + L L N ++S++ ++
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQS 429
>sp|Q6UXK2|ISLR2_HUMAN Immunoglobulin superfamily containing leucine-rich repeat protein 2
OS=Homo sapiens GN=ISLR2 PE=2 SV=1
Length = 745
Score = 70.9 bits (172), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
SCP C+C K + +C + +PEG+ + L LS+N I VL++ F +T
Sbjct: 18 GSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFAD--VT 75
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPI 138
+ L+L ++ V+ A ++ + LDLS N +S+ P L + L+ + + HN +
Sbjct: 76 QVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRL 135
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + + P +R + ++N ++ T+ F + + L+L N
Sbjct: 136 GSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V +CP CSC TV+C ++P I +T+ LDL+ NNI + K F
Sbjct: 23 VAPQACPAQCSCSGS----TVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDF--A 76
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK--SINLAH 135
G+ +++ L L + ++ ++ AF+ + ++ L L+ N L P L+++ K ++L+
Sbjct: 77 GLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSE 136
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
N I I +F+ I+ + + QI I AF + ++ L LN N + L
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL 190
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ TV+C ++ IP+ I T L L++N VL+ + +
Sbjct: 497 ACPEKCRCEGT----TVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 551
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 552 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 611
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 612 CVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLAN 656
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ I L N I I +F +R +D+SN QI + +AF G+ +++L L GNK+
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 188 SL 189
L
Sbjct: 362 EL 363
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 31/144 (21%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT-----------------------Q 57
+ CP C+C V C ++ +P+GI D
Sbjct: 717 SRCPSECTCL----DTVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLT 772
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
++DLS+N I+ L + F M T + L L +L + R F G+ ++ L L N +S
Sbjct: 773 LIDLSNNRISTLSNQSFSNM--TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 830
Query: 118 TVPSLIY--IPYLKSINLAHNPIH 139
VP + + L + + NP++
Sbjct: 831 VVPEGAFNDLSALSHLAIGANPLY 854
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
+F+ S + S + CP C+C V+C + IP + + L
Sbjct: 253 REFVCSGHQSFMAPSCSVLHCPAACTCS----NNIVDCRGKGLTEIPTNLPETITEIRLE 308
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL 122
N+I V+ F +++L L ++ + AF+G+ +++ L L N ++ +P
Sbjct: 309 QNSIRVIPPGAFSPY--KKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP-- 364
Query: 123 IYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
KS+ F+ ++ + ++ +I+ + +AF + ++ L L
Sbjct: 365 ------KSL--------------FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY 404
Query: 183 GNKLASLKPRTWS 195
NKL ++ T+S
Sbjct: 405 DNKLQTVAKGTFS 417
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 774 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 813
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP C C A R V C + F +PEGI +T++LDL N I L ++ F +
Sbjct: 35 GCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEF--ASFPH 90
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
+++L L + + V+ AF + N+ L L N L +P ++ + L ++++ N I
Sbjct: 91 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 150
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ Y FQ ++ +++ + + I AF G++ ++ L L L S+
Sbjct: 151 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 200
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ L + L+ I L +
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 317
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ F+ + ++TL L+ N LA
Sbjct: 318 AMVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 366
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ L+ VP L ++ YL+ +NL++NPI I ++ I + Q+
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 317
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ AF G++ + L ++GN+L +L+
Sbjct: 318 AMVEPYAFRGLNYLRVLNVSGNQLTTLE 345
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 142 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 199
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P +L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 200 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 258
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP C C A R V C + F +PEGI +T++LDL N I L ++ F +
Sbjct: 35 GCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEF--ASFPH 90
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
+++L L + + V+ AF + N+ L L N L +P ++ + L ++++ N I
Sbjct: 91 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 150
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ Y FQ ++ +++ + + I AF G++ ++ L L L S+
Sbjct: 151 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 200
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N + T+ L + L+ I L +
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQL 317
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 366
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ L+ VP L ++ YL+ +NL++NPI I ++ I + Q+
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQL 317
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ AF G++ + L ++GN+L +L+
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLE 345
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 142 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 199
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P +L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 200 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 258
>sp|Q5RDJ4|LIGO1_PONAB Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Pongo abelii GN=LINGO1
PE=2 SV=1
Length = 614
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP C C A R V C + F +PEGI +T++LDL N I L ++ F +
Sbjct: 35 GCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEF--ASFPH 90
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
+++L L + + V+ AF + N+ L L N L +P ++ + L ++++ N I
Sbjct: 91 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 150
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ Y FQ ++ +++ + + I AF G++ ++ L L L S+
Sbjct: 151 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 200
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ L + L+ I L +
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 317
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ F+ + ++TL L+ N LA
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 366
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ L+ VP L ++ YL+ +NL++NPI I ++ I + Q+
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 317
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ AF G++ + L ++GN+L +L+
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLE 345
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 142 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 199
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P +L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 200 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 258
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP C C A R V C + F +PEGI +T++LDL N I L ++ F +
Sbjct: 41 GCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEF--ASFPH 96
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
+++L L + + V+ AF + N+ L L N L +P ++ + L ++++ N I
Sbjct: 97 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 156
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ Y FQ ++ +++ + + I AF G++ ++ L L L S+
Sbjct: 157 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 206
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ L + L+ I L +
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 323
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ F+ + ++TL L+ N LA
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 372
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 105 NMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L ++ L+ VP L ++ YL+ +NL++NPI I ++ I + Q+
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 323
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ AF G++ + L ++GN+L +L+
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLE 351
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 148 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 205
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P +L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 206 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 264
>sp|O02833|ALS_PAPHA Insulin-like growth factor-binding protein complex acid labile
subunit OS=Papio hamadryas GN=IGFALS PE=2 SV=1
Length = 605
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 22 SCPLGCSCKW--KAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGI 79
+CP C+C + + + +V C RN +P+GI TQ L L SNN++ + F +
Sbjct: 40 ACPATCACSYDDEVNELSVFCSSRNLTRLPDGIPGGTQALWLDSNNLSSIPPAAFRNL-- 97
Query: 80 TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST--VPSLIYIPYLKSINLAHNP 137
+++ L L+ +L ++ +A G+ N+ L L N L + V + Y P L + L++N
Sbjct: 98 SSLAFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLAVGTFAYTPALALLGLSNNR 157
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ ++ F+ + +++ + + AF G+ + L L GN+LA L+P +S
Sbjct: 158 LSRLEDGLFEGLGNLWDLNLGWNSLAVLPDAAFRGLGGLRELVLAGNRLAYLQPALFS 215
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL F G+ +++L L +L ++ F G+ + ELDLS N L
Sbjct: 175 LNLGWNSLAVLPDAAF--RGLGGLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRA 232
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + ++ +P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 IKANVFAQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L+ N +ASL+PRT+
Sbjct: 293 RVLRLSHNAIASLRPRTF 310
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN---- 114
LDLS N + ++ +F Q+ +QKLYL + + V AF G+ + LDLS N
Sbjct: 223 LDLSRNALRAIKANVFAQL--PRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAG 280
Query: 115 -LLSTVPSLIY---------------------IPYLKSINLAHNPIHQISSYSFQSTPGI 152
L T P L+ + +L+ + L HN I Q++ SF+ +
Sbjct: 281 LLEDTFPGLLGLRVLRLSHNAIASLRPRTFEDLHFLEELQLGHNRIRQLAERSFEGLGQL 340
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + Q+ + AF G+ + + L+GN L +L
Sbjct: 341 EVLTLDHNQLQEVKVGAFLGLTNVAVMNLSGNCLRNL 377
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L +L+ V AF G+TN+ ++LS N L
Sbjct: 319 LQLGHNRIRQLAERSF--EGLGQLEVLTLDHNQLQEVKVGAFLGLTNVAVMNLSGNCLRN 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L + + +I ++F G+R + + + + I ++ +G+ ++
Sbjct: 377 LPEQVFRGLGKLHSLHLEGSCLGRIRPHTFAGLSGLRRLFLKDNGLVGIEEQSLWGLAEL 436
Query: 177 DTLKLNGNKLASL 189
L L N+L L
Sbjct: 437 LELDLTSNQLTHL 449
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+L+ L +++++ G+ + ELDL+ N L+ +P ++ + L+ + L+H
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHQLFQGLGKLEYLLLSH 467
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + ++ + + ++D+S+ ++ + + ++ L L N L + P+
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPGSLLASLGRLRYLNLRNNSLRTFTPQ 524
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L+ N + LQ +F G+ +++L L + L + F + + +L L NL++
Sbjct: 199 LVLAGNRLAYLQPALF--SGLAELRELDLSRNALRAIKANVFAQLPRLQKLYLDRNLIAA 256
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + + + L+ ++L+HN + + +F G+R + +S+ I ++ F + +
Sbjct: 257 VAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFEDLHFL 316
Query: 177 DTLKLNGNKLASLKPRTW 194
+ L+L N++ L R++
Sbjct: 317 EELQLGHNRIRQLAERSF 334
>sp|Q8VCH9|LRC3B_MOUSE Leucine-rich repeat-containing protein 3B OS=Mus musculus GN=Lrrc3b
PE=2 SV=1
Length = 259
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIF--KDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>sp|Q96PB8|LRC3B_HUMAN Leucine-rich repeat-containing protein 3B OS=Homo sapiens GN=LRRC3B
PE=2 SV=1
Length = 259
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIF--KDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>sp|A6H789|LRC3B_BOVIN Leucine-rich repeat-containing protein 3B OS=Bos taurus GN=LRRC3B
PE=2 SV=1
Length = 259
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIF--KDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>sp|B4F7C5|LRRT4_RAT Leucine-rich repeat transmembrane neuronal protein 4 OS=Rattus
norvegicus GN=Lrrtm4 PE=1 SV=1
Length = 590
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
Q +CP C C K V C F IPE I +Q L L N+I L+ F G
Sbjct: 30 AQRACPKNCRCDGK----IVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQF--AG 83
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPI 138
+ + LYL + VD+ AF+G+ + EL LS N I HN
Sbjct: 84 LNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN---------------KITYLHNK- 127
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+F P +R +D+S ++ T+ SE F G+ K+ L L N L ++ R +
Sbjct: 128 ------TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVF 177
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 33/178 (18%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVP-----------------------SLIYIPYL---KSINLAH 135
N+D LDL N L ++ + + P L +SI L
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
N I +S + + +D+S I I F + + L L+ NKL ++ T
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQET 296
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L+V LL + +++ CP C C A ++V C R IPEGI ++T++LDLS N +
Sbjct: 15 LAVVLLLMGSTI---GCPARCECS--AQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRL 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY-- 124
+ E F+ + ++++ L + V+ AF + N+ L L N L VP ++
Sbjct: 70 KSINPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTG 127
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L ++++ N I + Y FQ ++ +++ + + I AF G+ ++ L L
Sbjct: 128 LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKC 187
Query: 185 KLASLKPRTWS 195
L ++ S
Sbjct: 188 NLTAVPTEALS 198
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 105 NMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L +++ LSTVP L + + YL +NL++NPI I + F ++ + + Q+
Sbjct: 250 NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQL 309
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
TI +F G+ + L ++ N L +L+ +S
Sbjct: 310 RTIEPHSFQGLRFLRVLNVSQNLLETLEENVFS 342
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L+
Sbjct: 134 LDISENKIVILLDYMF--QDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTA 191
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
VP +L ++ L +++L H I+ + Y+F+ R + N +I
Sbjct: 192 VPTEALSHLRSLIALHLKHLNINNMPVYAFK-----RLFHLKNLEI 232
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N+ L + L V AF+ + + L+LS N +ST+ + ++ + L+ +++ +
Sbjct: 250 NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQL 309
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
I +SFQ +R +++S + T+ F ++ L +N N LA
Sbjct: 310 RTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLA 358
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N I+ ++ +F + +Q+L++ +L ++ +F+G+ + L++S NLL T
Sbjct: 278 LNLSYNPISTIEAGMF--SDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLET 335
Query: 119 VPSLIYIP--YLKSINLAHNPI 138
+ ++ L+ +++ +NP+
Sbjct: 336 LEENVFSSPRALEVLSINNNPL 357
>sp|Q86VH4|LRRT4_HUMAN Leucine-rich repeat transmembrane neuronal protein 4 OS=Homo
sapiens GN=LRRTM4 PE=2 SV=2
Length = 590
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
Q +CP C C K V C F IPE I +Q L L N+I L+ F G
Sbjct: 30 AQRACPKNCRCDGK----IVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQF--AG 83
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPI 138
+ + LYL + VD+ AF+G+ + EL LS N I HN
Sbjct: 84 LNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN---------------KITYLHNK- 127
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+F P +R +D+S ++ T+ SE F G+ K+ L L N L ++ R +
Sbjct: 128 ------TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVF 177
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 33/178 (18%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVP-----------------------SLIYIPYL---KSINLAH 135
N+D LDL N L ++ + + P L +SI L
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
N I IS + + +D+S I I F + + L L+ NKL ++ T
Sbjct: 239 NRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQET 296
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
++CP C+C TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 32 SACPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDF--AGLK 85
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPI 138
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ VEC IPE I T L L++N I++L+ + +T++
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK-LTHL 567
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +N I
Sbjct: 568 KKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
I + SF +R + + + QI T+ AF + + TL L N
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPF 673
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN + +PE + + Q L DLS N I + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 108 ELDLSDNLLSTVPS---LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHT 164
EL L++N +S + + + +LK INL++N + +I +F+ + + ++ Q+ +
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 165 IYSEAFYGIDKIDTLKLNGNKLASL 189
I S F G+D + TL L N+++ +
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCI 628
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 109 LDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE 168
+D L+ +P+ + + I L N I I +F +R ID+SN QI I +
Sbjct: 293 VDCRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 351
Query: 169 AFYGIDKIDTLKLNGNKLASLKPR 192
AF G+ +++L L GNK+ L PR
Sbjct: 352 AFQGLRSLNSLVLYGNKITDL-PR 374
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 106 MDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIH 163
M E+ L N + ++P + PY L+ I+L++N I +I+ +FQ + + + +I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ F G+ + L LN NK+ ++P
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRP 398
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 105 NMDELDLSDNLLSTVPS-LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIH 163
N+ EL L N + VP L YL+ ++L++N I +S+ SF + + + +S +
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLK 190
I AF G+ + L L+GN +++L+
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDISTLQ 848
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL +F G+ N+ +L L KL ++ G+ + ELDLS N L +
Sbjct: 175 LNLGWNSLVVLPDTVF--QGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRS 232
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + I++P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 VKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N + SL+PRT+
Sbjct: 293 HVLRLAHNAITSLRPRTF 310
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP+ C+C + + +V C RN +P+GI + T+ L L NN++ + F ++
Sbjct: 41 CPVTCTCSYDDYTDELSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAF--QNLS 98
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L NLL ++ + ++ P L S++L +N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLL 158
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ F+ + +++ + + F G+ + L L GNKL L+P
Sbjct: 159 GRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 211
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN---- 114
LDLS N + ++ +F+ + +QKLYL + + V RAF G+ + LDLS N
Sbjct: 223 LDLSRNALRSVKANVFIHL--PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG 280
Query: 115 -LLSTVPSLIYIP---------------------YLKSINLAHNPIHQISSYSFQSTPGI 152
L T P L+ + +L+ + L HN I Q+ +F+ +
Sbjct: 281 LLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQL 340
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ +++ QIH + AF+G+ + + L+GN L SL
Sbjct: 341 EVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSL 377
Score = 50.1 bits (118), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L ++ F G+ ++ L L ++ V AF G+ N+ ++LS N L +
Sbjct: 319 LQLGHNRIRQLGEKTF--EGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRS 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + +I ++F G+R + + + I +I ++ G+ ++
Sbjct: 377 LPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L PR
Sbjct: 437 LELDLTANQLTHL-PR 451
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+LR + +++++ G++ + ELDL+ N L+ +P ++ + L+ + L++
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSN 467
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + +S ++D+S+ ++ T F + ++ L L N L + P+
Sbjct: 468 NQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQ 524
>sp|Q6NUI6|CHADL_HUMAN Chondroadherin-like protein OS=Homo sapiens GN=CHADL PE=2 SV=2
Length = 762
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C +R V C +N +P+ I TQ LDL N + V+ F G+ ++
Sbjct: 33 CPQACICD--NSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAF--QGVPHL 88
Query: 83 QKLYLRKCKLEFVDDRAFR------------------------GVTNMDELDLSDNLLST 118
L LR C++E V + AFR G+ ++ L+L N L
Sbjct: 89 THLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEE 148
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + + L ++NLAHN + + + +FQ +R++ +S+ + + EA G+ +
Sbjct: 149 LRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPAL 208
Query: 177 DTLKLNGNKLASL 189
L L+ N+L +L
Sbjct: 209 RRLSLHHNELQAL 221
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 30/192 (15%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A CP C C ++ R C +P G DTQ+LDL N+ + + F G+
Sbjct: 394 APCPRACVCVPES--RHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAF--PGLG 449
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV--------PSLIY-------- 124
++ L+L+ C + ++ A G+ + L LSDN L+ + P L Y
Sbjct: 450 HLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRF 509
Query: 125 ----------IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+P L S++L N + +++ T +R++ +S +I + A
Sbjct: 510 LQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPAR 569
Query: 175 KIDTLKLNGNKL 186
+++ L L+ N+L
Sbjct: 570 ELEKLHLDRNQL 581
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L+ N + L F G+ ++ L L L + A G+ + L L N L
Sbjct: 163 LNLAHNALVYLPAMAF--QGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQA 220
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P L L + L HNP+ + PG+R + + + + AF ++
Sbjct: 221 LPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRL 280
Query: 177 DTLKLNGNKLASLKP 191
TL L GN+L +L P
Sbjct: 281 HTLDLRGNQLDTLPP 295
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 109 LDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIY 166
LDL NLL +P+ + +P+L ++L H + ++ +F+ + +++++ + +
Sbjct: 67 LDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELP 126
Query: 167 SEAFYGIDKIDTLKLNGNKLASLKPRTW 194
EA G+ + L+L GN L L+P T+
Sbjct: 127 QEALDGLGSLRRLELEGNALEELRPGTF 154
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGV-TNMDELDLSDNLLS 117
L LS N + L+ F +G ++Q L+L LE + AF G+ + L L N L
Sbjct: 598 LQLSGNPLRALRDGAFQPVG-RSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLR 656
Query: 118 TVPSLIYIPYLKSINLAHNPIH 139
+P+L + L+ I+L+ NP H
Sbjct: 657 ALPALPSLSQLELIDLSSNPFH 678
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 22 SCPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGI 79
+CP C C + A + +V C RN +P+G+ TQ L L NN++ + F +
Sbjct: 40 ACPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAF--QNL 97
Query: 80 TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNP 137
+++ L L+ +L ++ +A G+ N+ L L N L ++ + + P L S+ L++N
Sbjct: 98 SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNR 157
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ ++ F+ + +++ + + AF G+ + L L GN+LA L+P +S
Sbjct: 158 LSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFS 215
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL F G+ ++++L L +L ++ F G+ + ELDLS N L
Sbjct: 175 LNLGWNSLAVLPDAAF--RGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRA 232
Query: 119 VPSLIYI--PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + +++ P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L+ N +ASL+PRT+
Sbjct: 293 RVLRLSHNAIASLRPRTF 310
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 28/157 (17%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN---- 114
LDLS N + ++ +F+Q+ +QKLYL + + V AF G+ + LDLS N
Sbjct: 223 LDLSRNALRAIKANVFVQL--PRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAG 280
Query: 115 -LLSTVP---------------------SLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
L T P + + +L+ + L HN I Q++ SF+ +
Sbjct: 281 LLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQL 340
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + Q+ + + AF G+ + + L+GN L +L
Sbjct: 341 EVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNL 377
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L +L+ V AF G+TN+ ++LS N L
Sbjct: 319 LQLGHNRIRQLAERSF--EGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRN 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L + + +I ++F G+R + + + + I ++ +G+ ++
Sbjct: 377 LPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L R
Sbjct: 437 LELDLTSNQLTHLPHR 452
Score = 39.7 bits (91), Expect = 0.014, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+L+ L +++++ G+ + ELDL+ N L+ +P ++ + L+ + L+
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSR 467
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + ++ + + ++D+S+ ++ + + + ++ L L N L + P+
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQ 524
>sp|Q8N7C0|LRC52_HUMAN Leucine-rich repeat-containing protein 52 OS=Homo sapiens GN=LRRC52
PE=1 SV=2
Length = 313
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V+ + CP C C+ + V C + P I L+T+ L L+ N I L + +
Sbjct: 21 VSGSKCPNNCLCQ----AQEVICTGKQLTEYPLDIPLNTRRLFLNENRITSLPA---MHL 73
Query: 78 GI-TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLA 134
G+ +++ L + ++ V D F GV + LDLS N L+++ + + L +N+A
Sbjct: 74 GLLSDLVYLDCQNNRIREVMDYTFIGVFKLIYLDLSSNNLTSISPFTFSVLSNLVQLNIA 133
Query: 135 HNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+NP + + ++F +T +RY+D+ N + T+ S A Y + ++TL L+GN
Sbjct: 134 NNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGN 184
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 154 YIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
Y+D N +I + F G+ K+ L L+ N L S+ P T+S
Sbjct: 81 YLDCQNNRIREVMDYTFIGVFKLIYLDLSSNNLTSISPFTFS 122
>sp|Q9MYW3|TLR4_HORSE Toll-like receptor 4 OS=Equus caballus GN=TLR4 PE=2 SV=1
Length = 843
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
T +C+D N Y IPE I T+ LDLS N + L F +Q L L +C++E ++
Sbjct: 37 TYQCMDLNLYKIPENIPTSTKELDLSFNPLKELGSHSF--SNFPELQVLDLSRCEIEMIE 94
Query: 97 DRAFRGVTNMDELDLSDNL-----------LSTVPSLI---------------YIPYLKS 130
D A++G+ ++ L L+ N LS++ +L+ ++ LK
Sbjct: 95 DDAYQGLNHLSTLILTGNPIRSLALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKE 154
Query: 131 INLAHNPIH--QISSYSFQSTPGIRYIDMSNCQIHTIYSE 168
+N+AHN IH ++ Y F P + ++D+SN +I I E
Sbjct: 155 LNVAHNLIHSFKLPEY-FSKMPNLEHLDLSNNKIQNISHE 193
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%)
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
K ++L+ NP+ ++ S+SF + P ++ +D+S C+I I +A+ G++ + TL L GN + S
Sbjct: 57 KELDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRS 116
Query: 189 L 189
L
Sbjct: 117 L 117
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 74 FLQMGITNIQKLYLRKCKLEFVD--DRAFRGVTNMDELDLS-DNLLSTVPSLIYIPYLKS 130
F ++ + +++ L L + +L F A T + LDLS ++++S + + + L+
Sbjct: 368 FNEVKLPSLEFLDLSRNRLSFKSCCSEADLKTTRLKHLDLSFNDVISMSSNFMGLEQLEH 427
Query: 131 INLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
++ H+ + Q S + F S +RY+D+S ++ F G+ + LK+ GN
Sbjct: 428 LDFQHSTLKQASDFPVFLSLKNLRYLDISYTNTRVVFHGIFDGLVSLQVLKMAGN 482
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 45 FYTIPEGIDLDTQVLDLSSNNI--NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRG 102
F+ I +G+ + QVL ++ N+ N L IF +M TN+ L L KC LE V AF
Sbjct: 464 FHGIFDGL-VSLQVLKMAGNSFKDNFL-PNIFREM--TNLTTLDLSKCNLEQVSQEAFCL 519
Query: 103 VTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
+ + L++S N L + L Y P L S+ + ++I ++ +Q
Sbjct: 520 LPRLRVLNMSHNNLLFLDMLPYKP-LHSLQILDCSFNRIVAFKWQE 564
>sp|Q9IB75|PGS1_XENLA Biglycan OS=Xenopus laevis GN=bgn PE=2 SV=1
Length = 368
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP GC C R V+C D +IP+ + DT +LDL +N I ++K+ F G+TN+
Sbjct: 63 CPFGCQCHL----RVVQCSDLGLTSIPKNLPKDTTLLDLQNNKITEIKKDDF--KGLTNL 116
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQI 141
L + K+ ++++AF + M +L +S N L +P +P L + + N I ++
Sbjct: 117 YALVIVNNKISKINEKAFEPLQKMQKLYISKNNLEEIPK--NLPKSLVELRIHENKIKKV 174
Query: 142 SSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
F + I+M + I + AF G+ K++ L+++ KL+ +
Sbjct: 175 PKGVFSGLKNMNCIEMGGNPLENGGIEAGAFDGL-KLNYLRVSEAKLSGI 223
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 48 IPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMD 107
IP+G+ L L +N I ++KE Q ++ +L L + +++ + + +
Sbjct: 223 IPKGLPSTLNELHLDNNKIQAIEKEDLSQY--ASLYRLGLGHNNIRMIENGSLSFMPVLR 280
Query: 108 ELDLSDNLLSTV-PSLIYIPYLKSINLAHNPIHQISSYSF 146
EL L +N LS V P L + L+ + L N I Q+ F
Sbjct: 281 ELHLDNNKLSKVPPGLPDMKLLQVVYLHSNNITQVGVNDF 320
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 33 ACPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDF--AGLKQ 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPIH 139
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N +
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
+ +CP C C+ VEC IPE I T L L++N I++L+ +
Sbjct: 508 TSDVACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKK 563
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
+++++K+ L K+ ++D F G T++ EL L+ N L +V S ++ + L+++ L +
Sbjct: 564 -LSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRN 622
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
N I I + SF +R + + + I TI AF + + TL L N
Sbjct: 623 NRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPF 673
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + + Q L DLS N++ + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPS---LIYIPYLKSINLAHNPIHQISSYSFQ 147
KL + +R + T EL L++N +S + + + +LK INL++N + +I +F+
Sbjct: 530 KLSKIPERIPQSTT---ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFE 586
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + ++ Q+ ++ S F G+D + TL L N+++ +
Sbjct: 587 GATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCI 628
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 109 LDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE 168
+D L+ +P+ + + I L N I I +F +R ID+SN QI I +
Sbjct: 293 VDCRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 351
Query: 169 AFYGIDKIDTLKLNGNKLASLKPR 192
AF G+ +++L L GNK+ L PR
Sbjct: 352 AFQGLRSLNSLVLYGNKITDL-PR 374
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 106 MDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIH 163
M E+ L N + ++P + PY L+ I+L++N I +I+ +FQ + + + +I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ F G+ + L LN NK+ ++P +
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAF 401
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 105 NMDELDLSDNLLSTVPS-LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIH 163
N+ EL L N + VP L YL+ ++L++N I +S+ SF + + + +S +
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLK 190
I AF G+ + L L+GN +++L+
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQ 848
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 15 LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF 74
+ + + CP C+C V C +++ +P+GI + L L N ++ ++
Sbjct: 726 VGCLPRPQCPQECACL----DTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLS 781
Query: 75 LQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
+Q + L K+ + + +F ++ + L LS N L +P L +
Sbjct: 782 T---FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAF 828
Score = 30.0 bits (66), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
Query: 17 SVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQ 76
+++ SCP CSC V+C + IP + + L N I + F
Sbjct: 276 TLSSGSCPAMCSCS----NGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSP 331
Query: 77 MGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHN 136
++++ L ++ + AF+G+ +++ L L N ++ +P ++ L N
Sbjct: 332 Y--RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+N +I+ I +AF + + L L NK+ SL T++
Sbjct: 390 ---------------------AN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,645,740
Number of Sequences: 539616
Number of extensions: 2542862
Number of successful extensions: 8894
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 6238
Number of HSP's gapped (non-prelim): 1942
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)