Your job contains 1 sequence.
>psy14767
MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD
LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP
SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK
LNGNKLASLKPRTWS
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14767
(195 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015399 - symbol:kek1 "kekkon-1" species:7227 "Dro... 471 6.5e-44 1
FB|FBgn0015400 - symbol:kek2 "kekkon-2" species:7227 "Dro... 395 1.1e-35 1
FB|FBgn0028370 - symbol:kek3 "kekkon-3" species:7227 "Dro... 358 1.4e-31 1
FB|FBgn0039862 - symbol:kek6 "kek6" species:7227 "Drosoph... 272 1.6e-22 1
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 248 3.5e-20 1
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 248 3.5e-20 1
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 248 3.5e-20 1
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 248 3.5e-20 1
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 248 3.5e-20 1
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 248 3.5e-20 1
FB|FBgn0032484 - symbol:kek4 "kekkon4" species:7227 "Dros... 242 1.6e-19 1
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 237 1.7e-19 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 240 2.6e-19 1
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 238 3.0e-19 1
FB|FBgn0031016 - symbol:kek5 "kekkon5" species:7227 "Dros... 230 5.8e-18 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 226 8.1e-18 1
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 219 5.7e-17 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 217 9.3e-17 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 217 9.3e-17 1
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 217 9.4e-17 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 216 1.2e-16 1
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 216 1.2e-16 1
MGI|MGI:2182081 - symbol:Lrrc4 "leucine rich repeat conta... 214 1.7e-16 1
UNIPROTKB|Q9HBW1 - symbol:LRRC4 "Leucine-rich repeat-cont... 214 1.7e-16 1
RGD|1560026 - symbol:Lrrc4 "leucine rich repeat containin... 213 2.2e-16 1
ZFIN|ZDB-GENE-041210-129 - symbol:lrrc4.1 "leucine rich r... 214 2.6e-16 1
FB|FBgn0011828 - symbol:Pxn "Peroxidasin" species:7227 "D... 216 3.5e-16 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 214 5.7e-16 1
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 209 7.3e-16 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 213 7.3e-16 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 213 7.3e-16 1
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 213 7.3e-16 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 208 9.0e-16 1
MGI|MGI:1924118 - symbol:Lrrc52 "leucine rich repeat cont... 197 1.4e-15 1
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 210 1.5e-15 1
ZFIN|ZDB-GENE-040912-136 - symbol:lingo1b "leucine rich r... 201 3.9e-15 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 200 1.8e-14 1
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 200 1.8e-14 1
UNIPROTKB|A6H789 - symbol:LRRC3B "Leucine-rich repeat-con... 185 1.8e-14 1
UNIPROTKB|Q96PB8 - symbol:LRRC3B "Leucine-rich repeat-con... 185 1.8e-14 1
MGI|MGI:2384996 - symbol:Lrrc3b "leucine rich repeat cont... 185 1.8e-14 1
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 195 2.4e-14 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 195 2.4e-14 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 193 2.8e-14 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 193 2.8e-14 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 193 2.8e-14 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 193 2.8e-14 1
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 193 2.8e-14 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 198 2.9e-14 1
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 198 2.9e-14 1
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 198 2.9e-14 1
ZFIN|ZDB-GENE-010102-1 - symbol:dcn "decorin" species:795... 187 4.0e-14 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 191 4.5e-14 1
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 195 6.1e-14 1
ZFIN|ZDB-GENE-050522-160 - symbol:lrit2 "leucine-rich rep... 189 6.3e-14 1
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 194 7.7e-14 1
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 188 8.9e-14 1
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 188 9.7e-14 1
UNIPROTKB|Q8N7C0 - symbol:LRRC52 "Leucine-rich repeat-con... 181 9.8e-14 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 192 1.3e-13 1
ZFIN|ZDB-GENE-080327-13 - symbol:lrrc3 "leucine rich repe... 177 1.3e-13 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 186 1.5e-13 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 186 1.5e-13 1
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 186 1.5e-13 1
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 191 1.6e-13 1
UNIPROTKB|F1NVW6 - symbol:F1NVW6 "Uncharacterized protein... 176 1.6e-13 1
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 185 2.0e-13 1
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 184 2.3e-13 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 184 2.4e-13 1
ZFIN|ZDB-GENE-080327-16 - symbol:lingo1a "leucine rich re... 184 2.6e-13 1
UNIPROTKB|F1P1D7 - symbol:F1P1D7 "Uncharacterized protein... 180 3.2e-13 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 183 3.2e-13 1
RGD|1359311 - symbol:Tsku "tsukushi, small leucine rich p... 178 3.4e-13 1
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 182 3.8e-13 1
MGI|MGI:2389177 - symbol:Lrrtm3 "leucine rich repeat tran... 181 4.9e-13 1
RGD|1304866 - symbol:Lrrtm3 "leucine rich repeat transmem... 181 4.9e-13 1
ZFIN|ZDB-GENE-040704-74 - symbol:bgna "biglycan a" specie... 177 5.0e-13 1
UNIPROTKB|F1NRZ3 - symbol:RTN4R "Uncharacterized protein"... 179 5.7e-13 1
MGI|MGI:2444277 - symbol:Islr2 "immunoglobulin superfamil... 181 7.3e-13 1
RGD|1561726 - symbol:Lrrc55 "leucine rich repeat containi... 173 7.8e-13 1
UNIPROTKB|E1BEI7 - symbol:RTN4RL1 "Uncharacterized protei... 177 8.0e-13 1
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 182 9.0e-13 1
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 181 1.0e-12 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 178 1.1e-12 1
UNIPROTKB|E1C5R1 - symbol:LOC428618 "Uncharacterized prot... 176 1.4e-12 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 177 1.4e-12 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 177 1.4e-12 1
UNIPROTKB|Q86UN2 - symbol:RTN4RL1 "Reticulon-4 receptor-l... 174 1.7e-12 1
MGI|MGI:2685197 - symbol:Lrrc55 "leucine rich repeat cont... 170 1.7e-12 1
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 178 1.8e-12 1
UNIPROTKB|H3BQ49 - symbol:LINGO1 "Leucine-rich repeat and... 166 1.9e-12 1
UNIPROTKB|Q6UXK2 - symbol:ISLR2 "Immunoglobulin superfami... 177 2.0e-12 1
MGI|MGI:2653612 - symbol:Amigo1 "adhesion molecule with I... 174 2.1e-12 1
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 175 2.2e-12 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 180 2.4e-12 1
ZFIN|ZDB-GENE-040310-3 - symbol:rtn4rl1b "reticulon 4 rec... 173 2.5e-12 1
MGI|MGI:2443855 - symbol:Tsku "tsukushi" species:10090 "M... 170 2.6e-12 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 177 2.8e-12 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 174 3.0e-12 1
UNIPROTKB|F1N7G4 - symbol:ISLR2 "Uncharacterized protein"... 175 3.2e-12 1
WARNING: Descriptions of 529 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 471 (170.9 bits), Expect = 6.5e-44, P = 6.5e-44
Identities = 89/176 (50%), Positives = 124/176 (70%)
Query: 20 QASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGI 79
Q++C C+CKWK GK+TVECIDR+ IPE ID +TQVLD+S N + L E F++ +
Sbjct: 87 QSTCQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANL 146
Query: 80 TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNP 137
N+QKLYLR CK+ ++ F+G+TN+ ELDLS NLL TVPSL +IP L+ + LA N
Sbjct: 147 LNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNH 206
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
IH+I S +F +TP + +D+S+C I TI ++AF G+ + L+LNGNKL+ L P+T
Sbjct: 207 IHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKT 262
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 395 (144.1 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 79/182 (43%), Positives = 122/182 (67%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL LLA +T A P C CKWK GK+TVEC + +PEG+D TQVL+ S N + VLQ
Sbjct: 10 LLALLA-ITAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQVLQ 68
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--L 128
E FL+M + N+QK+YL + +L + ++AFRG+TN+ ELDLS+N L VPS + Y L
Sbjct: 69 SERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSL 128
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ NPI ++ + +F+ + +++SNCQ+ I +EAF G+D ++ L+L+GN++
Sbjct: 129 MRLSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGF 188
Query: 189 LK 190
++
Sbjct: 189 IQ 190
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 358 (131.1 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/192 (38%), Positives = 120/192 (62%)
Query: 7 LSVFLLTLLASVTQ--ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
L ++LL + + Q A CP C CKWK+GK +V C++ N IP+ +D TQ+LDLS N
Sbjct: 61 LLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGN 120
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL-I 123
I ++ + F + N+QK+YL +C L ++ AFR + N+ ELDLS NLLS +PSL +
Sbjct: 121 EIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLAL 180
Query: 124 Y-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK-IDTLKL 181
Y + L+ + L+ NPI ++ +F P + +++S+C++ I AF G++ ++ LKL
Sbjct: 181 YHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKL 240
Query: 182 NGNKLASLKPRT 193
+GN+L+ ++ T
Sbjct: 241 DGNRLSEVRSGT 252
>FB|FBgn0039862 [details] [associations]
symbol:kek6 "kek6" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0046331 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 EMBL:BT100194
RefSeq:NP_651880.1 UniGene:Dm.24119 SMR:Q9V9V6
EnsemblMetazoa:FBtr0085821 GeneID:43729 KEGG:dme:Dmel_CG1804
UCSC:CG1804-RA CTD:43729 FlyBase:FBgn0039862 eggNOG:NOG238103
InParanoid:Q9V9V6 OMA:MGRRITA OrthoDB:EOG4S1RQ2 GenomeRNAi:43729
NextBio:835480 Uniprot:Q9V9V6
Length = 836
Score = 272 (100.8 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 58/187 (31%), Positives = 102/187 (54%)
Query: 5 FILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+IL + +A SC C+CKW GK++ C TIP + + QVL L+ N
Sbjct: 20 WILLCLVAWTVADDWSLSCASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDN 79
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
+I L +E F +G+ N+Q++YL+K +++++ +FR + + E+DLSDN L + +
Sbjct: 80 HIPYLNREEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTF 139
Query: 125 I--PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
+ L+ + L NP+ ++++Y F P +R +DM +C I I + ++ ++ L L
Sbjct: 140 MGNDRLRILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLK 199
Query: 183 GNKLASL 189
N L SL
Sbjct: 200 NNLLESL 206
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 38/144 (26%), Positives = 70/144 (48%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DLS N + +L K+ F MG ++ LYL L+ + F + ++ LD+ D L+S
Sbjct: 124 IDLSDNKLEMLDKDTF--MGNDRLRILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISY 181
Query: 119 V-P-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS------NCQIHTIYSEAF 170
+ P SL + L+ +NL +N + +S Y FQ ++ + + NC++ +
Sbjct: 182 IDPMSLANLNLLEFLNLKNNLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKF--RGW 239
Query: 171 YGIDKIDTLKLNGNKLASLKPRTW 194
Y ++ ++ L + K RTW
Sbjct: 240 YVNSRLSSVSLVCKGPPAQKDRTW 263
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 IKLDELDLSGNHLSAIRP 236
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 27/88 (30%), Positives = 56/88 (63%)
Query: 52 IDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDL 111
I LD LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L
Sbjct: 219 IKLDE--LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 274
Query: 112 SDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ N L+ +P ++ P +L+ I+L HNP
Sbjct: 275 AHNNLTLLPHDLFTPLHHLERIHLHHNP 302
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 VKLDELDLSGNHLSAIRP 236
Score = 127 (49.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 24/81 (29%), Positives = 53/81 (65%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L+ N L+
Sbjct: 224 LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 281
Query: 119 VPSLIYIP--YLKSINLAHNP 137
+P ++ P +L+ I+L HNP
Sbjct: 282 LPHDLFTPLHHLERIHLHHNP 302
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 IKLDELDLSGNHLSAIRP 236
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 27/88 (30%), Positives = 56/88 (63%)
Query: 52 IDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDL 111
I LD LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L
Sbjct: 219 IKLDE--LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 274
Query: 112 SDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ N L+ +P ++ P +L+ I+L HNP
Sbjct: 275 AHNNLTLLPHDLFTPLHHLERIHLHHNP 302
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 IKLDELDLSGNHLSAIRP 236
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 27/88 (30%), Positives = 56/88 (63%)
Query: 52 IDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDL 111
I LD LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L
Sbjct: 219 IKLDE--LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 274
Query: 112 SDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ N L+ +P ++ P +L+ I+L HNP
Sbjct: 275 AHNNLTLLPHDLFTPLHHLERIHLHHNP 302
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 IKLDELDLSGNHLSAIRP 236
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 27/88 (30%), Positives = 56/88 (63%)
Query: 52 IDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDL 111
I LD LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L
Sbjct: 219 IKLDE--LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 274
Query: 112 SDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ N L+ +P ++ P +L+ I+L HNP
Sbjct: 275 AHNNLTLLPHDLFTPLHHLERIHLHHNP 302
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 248 (92.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/192 (30%), Positives = 106/192 (55%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C+ +N +P+GI +T++L+L N
Sbjct: 30 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQ 87
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I +++ F + +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +
Sbjct: 88 IQIIKVNSFKHL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL- 181
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L L
Sbjct: 146 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 205
Query: 182 --NGNKLASLKP 191
N ++ +L P
Sbjct: 206 MCNLREIPNLTP 217
Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 218
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L++++P
Sbjct: 219 IKLDELDLSGNHLSAIRP 236
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 181
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 182 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 282
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 27/88 (30%), Positives = 56/88 (63%)
Query: 52 IDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDL 111
I LD LDLS N+++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L
Sbjct: 219 IKLDE--LDLSGNHLSAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 274
Query: 112 SDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ N L+ +P ++ P +L+ I+L HNP
Sbjct: 275 AHNNLTLLPHDLFTPLHHLERIHLHHNP 302
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/191 (29%), Positives = 107/191 (56%)
Query: 5 FILSVFLLTLLASVTQASCPLGCS---CKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
F+ ++ L L+ A L C CKW +GK+T +C + + +PE + + QVLDL
Sbjct: 20 FLFKIYCLALIFRSASADWLLDCGNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDL 79
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL-STVP 120
S N+I L++ FL + N+QKL +R L++++ R+F + + ELDLS+NLL +P
Sbjct: 80 SHNHIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLP 139
Query: 121 SLI-YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
++ + +++I L N + + F++ + I++ ++ +I ++AF G+ + +
Sbjct: 140 NVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQI 199
Query: 180 KLNGNKLASLK 190
L+ N+L L+
Sbjct: 200 YLDNNELTKLR 210
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 237 (88.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/180 (31%), Positives = 99/180 (55%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V +CP CSC + K V C+ +N +P+GI +T++L+L N I +++ F +
Sbjct: 19 VRAQTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHL 76
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAH 135
+++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +Y+ LK + L +
Sbjct: 77 --RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 134
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL---NGNKLASLKP 191
NPI I SY+F P +R +D+ + + SE AF G+ + L L N ++ +L P
Sbjct: 135 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTP 194
Score = 145 (56.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 80 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 137
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 138 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 195
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L +++P
Sbjct: 196 VKLDELDLSGNHLTAIRP 213
Score = 126 (49.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 101 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 158
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 159 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQG 218
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 219 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 259
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 24/80 (30%), Positives = 51/80 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L+ N L+
Sbjct: 201 LDLSGNHLTAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 258
Query: 119 VPSLIYIPY-LKSINLAHNP 137
+P ++ P L+ I+L HNP
Sbjct: 259 LPHDLFTPLRLERIHLHHNP 278
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 61/182 (33%), Positives = 102/182 (56%)
Query: 5 FILSVFL-LTLLASVTQA-SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
F+LS+ L L ++A + +A +CP CSC + K V C R +P+GI +T+ L+L
Sbjct: 28 FVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICTRRGLRDVPDGISTNTRYLNLQ 85
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS- 121
N I V++ + F + +++ L L K + ++ AF G+ N++ L+L DN L+T+P+
Sbjct: 86 ENLIQVIKVDSFKHL--RHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNG 143
Query: 122 -LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTL 179
Y+ LK + L +NPI I SY+F P +R +D+ + + SE AF G+ + L
Sbjct: 144 AFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 203
Query: 180 KL 181
L
Sbjct: 204 NL 205
Score = 141 (54.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 35/138 (25%), Positives = 76/138 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 104 EILQLSKNHIRNIEIGAF--NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPI 161
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 162 ESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPN--LIPL 219
Query: 174 DKIDTLKLNGNKLASLKP 191
++D L+++GN+L+ ++P
Sbjct: 220 VRLDELEMSGNQLSIIRP 237
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 33 AGKRTVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + +++ +L +N I + F + + ++++L L +
Sbjct: 125 ANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNR--VPSLRRLDLGE 182
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L L +P+LI + L + ++ N + I SF+
Sbjct: 183 LKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSFKG 242
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M + QI TI AF + + L L N L L
Sbjct: 243 LVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLL 283
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 27/97 (27%), Positives = 57/97 (58%)
Query: 44 NFYTIPEGIDL-DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRG 102
N IP I L L++S N +++++ F G+ ++QKL++ +++ ++ AF
Sbjct: 209 NLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF--KGLVHLQKLWMMHAQIQTIERNAFDD 266
Query: 103 VTNMDELDLSDNLLSTVPSLIYIP--YLKSINLAHNP 137
+ ++ EL+L+ N L+ +P ++ P +L+ ++L HNP
Sbjct: 267 LQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNP 303
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 238 (88.8 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 57/182 (31%), Positives = 100/182 (54%)
Query: 16 ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL 75
AS +CP CSC + K V C+ +N +P+GI +T++L+L N I +++ F
Sbjct: 8 ASSGAQTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFK 65
Query: 76 QMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINL 133
+ +++ L L + + ++ AF G+ N++ L+L DN L+T+P+ +Y+ LK + L
Sbjct: 66 HL--RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 123
Query: 134 AHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL---NGNKLASL 189
+NPI I SY+F P +R +D+ + + SE AF G+ + L L N ++ +L
Sbjct: 124 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 183
Query: 190 KP 191
P
Sbjct: 184 TP 185
Score = 145 (56.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/138 (27%), Positives = 75/138 (54%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+ N+ L L +L + + AF ++ + EL L +N +
Sbjct: 71 EILQLSRNHIRTIEIGAF--NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 128
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + IP L+ ++L + IS +F+ +RY++++ C + I + +
Sbjct: 129 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPL 186
Query: 174 DKIDTLKLNGNKLASLKP 191
K+D L L+GN L +++P
Sbjct: 187 VKLDELDLSGNHLTAIRP 204
Score = 126 (49.4 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 33 AGKRTVECIDRNFYTIPEG--IDLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D TIP G + L + L L +N I + F + I ++++L L +
Sbjct: 92 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGE 149
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K L ++ + AF G++N+ L+L+ L +P+L + L ++L+ N + I SFQ
Sbjct: 150 LKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQG 209
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + M QI I AF + + + L N L L
Sbjct: 210 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 250
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 24/80 (30%), Positives = 51/80 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N++ ++ F G+ ++QKL++ + +++ ++ AF + ++ E++L+ N L+
Sbjct: 192 LDLSGNHLTAIRPGSF--QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 249
Query: 119 VPSLIYIPY-LKSINLAHNP 137
+P ++ P L+ I+L HNP
Sbjct: 250 LPHDLFTPLRLERIHLHHNP 269
>FB|FBgn0031016 [details] [associations]
symbol:kek5 "kekkon5" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030510 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:Q10466 FlyBase:FBgn0031016
EMBL:BT023770 RefSeq:NP_001245746.1 RefSeq:NP_573382.1
RefSeq:NP_728242.1 RefSeq:NP_728243.1 UniGene:Dm.33776 SMR:Q9VWI6
MINT:MINT-297003 EnsemblMetazoa:FBtr0074707
EnsemblMetazoa:FBtr0074708 EnsemblMetazoa:FBtr0309223
EnsemblMetazoa:FBtr0309224 GeneID:32930 KEGG:dme:Dmel_CG12199
UCSC:CG12199-RA CTD:32930 InParanoid:Q9VWI6 OMA:YDNLGLR
GenomeRNAi:32930 NextBio:781084 Uniprot:Q9VWI6
Length = 931
Score = 230 (86.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 50/175 (28%), Positives = 94/175 (53%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SC C C+W +GK++ +C ++ IP+ + + QVLD + N I L++E FL G+ N
Sbjct: 42 SCGT-CHCQWNSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFLLAGLPN 100
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHNPIH 139
+ K++LR C ++ V AF+G+ + ELDLS N + + P + L+++ + +N I
Sbjct: 101 VHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNEIE 160
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ ++ F + + I+ N ++ + F G + + L N+L+ L T+
Sbjct: 161 VLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETF 215
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 226 (84.6 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 57/192 (29%), Positives = 104/192 (54%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L++ LL + V +CP CSC + K V C R +P+G+ +T+ L+L N
Sbjct: 31 LLALQLLVVAGLVRAQTCPSVCSCSNQFSK--VICTRRGLKDVPDGVSTNTRYLNLQDNQ 88
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LI 123
I V++ + F + +++ L L + + ++ AF G+T+++ L+L DN L+T+P+
Sbjct: 89 IQVIKVDSFKHL--RHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFE 146
Query: 124 YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL- 181
Y+ LK + L +NPI I S +F P +R +D+ + + I S AF G+ + L L
Sbjct: 147 YLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLG 206
Query: 182 --NGNKLASLKP 191
N ++ +++P
Sbjct: 207 MCNLKEVPNIQP 218
Score = 141 (54.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 36/141 (25%), Positives = 79/141 (56%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N+I ++ F G+T++ L L +L + + AF ++ + EL L +N +
Sbjct: 104 EILQLSRNHIRNIEIGAF--NGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPI 161
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + ISS +FQ +RY+++ C + + + +
Sbjct: 162 ESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPL 219
Query: 174 DKIDTLKLNGNKLASLKPRTW 194
++D L+++GN+L ++P ++
Sbjct: 220 IRLDELEMSGNQLTVIQPSSF 240
Score = 120 (47.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/157 (24%), Positives = 78/157 (49%)
Query: 37 TVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D TIP G + +++ +L +N I + + F ++ ++++L L + K L
Sbjct: 129 TLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRL--PSLRRLDLGELKRL 186
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
++ AF+G++N+ L+L L VP++ + L + ++ N + I SF+ +
Sbjct: 187 SYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSFKGLVHL 246
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + M + Q+ TI +F + + L L N L L
Sbjct: 247 QKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFL 283
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 24/81 (29%), Positives = 51/81 (62%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L++S N + V+Q F G+ ++QKL++ +++ ++ +F + ++ EL+L+ N L+
Sbjct: 225 LEMSGNQLTVIQPSSF--KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTF 282
Query: 119 VPSLIYIP--YLKSINLAHNP 137
+P +Y P +L+ ++L HNP
Sbjct: 283 LPHDLYTPLHHLQRVHLHHNP 303
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 219 (82.2 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 52/163 (31%), Positives = 90/163 (55%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP+ CSC +A + V C R+ +P I ++T+ L+L N I V++ + F + +
Sbjct: 56 SCPVACSCSNQASR--VICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHL--RH 111
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Score = 145 (56.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 195
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 255
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 256 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 292
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 113 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 229 VRLEELELSGNRLDLIRP 246
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 234 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 291
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 292 LPHDLFTPLHRLERVHLNHNPWH 314
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 217 (81.4 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 52/163 (31%), Positives = 89/163 (54%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N+I V++ + F + +
Sbjct: 58 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHL--RH 113
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 174 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
Score = 145 (56.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 197
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 257
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 258 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 294
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 115 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 230
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 231 VRLEELELSGNRLDLIRP 248
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 236 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 293
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 294 LPHDLFTPLHRLERVHLNHNPWH 316
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 217 (81.4 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 52/163 (31%), Positives = 89/163 (54%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N+I V++ + F + +
Sbjct: 58 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHL--RH 113
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 174 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
Score = 145 (56.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 197
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 257
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 258 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 294
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 115 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 230
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 231 VRLEELELSGNRLDLIRP 248
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 236 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 293
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 294 LPHDLFTPLHRLERVHLNHNPWH 316
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 217 (81.4 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 56/176 (31%), Positives = 93/176 (52%)
Query: 12 LTLLA---SVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+TL A S SCP CSC +A + V C R +P I ++T+ L+L N I V
Sbjct: 43 MTLAAGGGSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQV 100
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIP 126
++ + F + +++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+
Sbjct: 101 IRTDTFKHL--RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLS 158
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
L+ + L +NPI I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 159 KLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Score = 145 (56.1 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 195
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 255
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 256 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 292
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 113 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 229 VRLEELELSGNRLDLIRP 246
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 234 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 291
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 292 LPHDLFTPLHRLERVHLNHNPWH 314
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 216 (81.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/163 (31%), Positives = 88/163 (53%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N I V++ + F + +
Sbjct: 56 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHL--RH 111
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Score = 145 (56.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 195
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 255
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 256 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 292
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 113 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 229 VRLEELELSGNRLDLIRP 246
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 234 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 291
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 292 LPHDLFTPLHRLERVHLNHNPWH 314
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 216 (81.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/163 (31%), Positives = 88/163 (53%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC +A + V C R +P I ++T+ L+L N I V++ + F + +
Sbjct: 56 SCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHL--RH 111
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPIH 139
++ L L K + ++ AF G+ +++ L+L DN L+TVP+ Y+ L+ + L +NPI
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 140 QISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
I SY+F P +R +D+ + + I AF G+ + L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Score = 145 (56.1 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D T+P + + +++ +L +N I + F + + ++++L L + K L
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLRRLDLGELKRL 195
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
E++ + AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 255
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ TI AF + ++ L L+ N L SL
Sbjct: 256 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSL 292
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N + ++ F G+ ++ L L +L V +AF ++ + EL L +N +
Sbjct: 113 EILQLSKNLVRKIEVGAF--NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
++PS + +P L+ ++L + IS +F+ +RY+++ C + I + +
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 229 VRLEELELSGNRLDLIRP 246
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/83 (31%), Positives = 53/83 (63%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N +++++ F G+T+++KL+L ++ ++ AF + +++EL+LS N L +
Sbjct: 234 LELSGNRLDLIRPGSF--QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMS 291
Query: 119 VPSLIYIPY--LKSINLAHNPIH 139
+P ++ P L+ ++L HNP H
Sbjct: 292 LPHDLFTPLHRLERVHLNHNPWH 314
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 214 (80.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 16 ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL 75
AS +CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F
Sbjct: 38 ASAGPQNCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFR 95
Query: 76 QMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINL 133
+ +++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L
Sbjct: 96 HLH--HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 153
Query: 134 AHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL 181
+NPI I SY+F P + +D+ + SE AF G+ + L L
Sbjct: 154 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 33 AGKRTVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D IP G + +++ +L +N I + F + + ++ +L L +
Sbjct: 122 ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLMRLDLGE 179
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K LE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 180 LKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHG 239
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 240 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 24/81 (29%), Positives = 51/81 (62%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L++S N+ ++ F G+++++KL++ ++ ++ AF G+ ++ EL+L+ N LS+
Sbjct: 222 LEMSGNHFPEIRPGSF--HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 279
Query: 119 VPSLIYIP--YLKSINLAHNP 137
+P ++ P YL ++L HNP
Sbjct: 280 LPHDLFTPLRYLVELHLHHNP 300
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 214 (80.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 16 ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL 75
AS +CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F
Sbjct: 39 ASAGPQNCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFR 96
Query: 76 QMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINL 133
+ +++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L
Sbjct: 97 HLH--HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154
Query: 134 AHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL 181
+NPI I SY+F P + +D+ + SE AF G+ + L L
Sbjct: 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 33 AGKRTVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D IP G + +++ +L +N I + F + + ++ +L L +
Sbjct: 123 ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLMRLDLGE 180
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K LE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 181 LKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHG 240
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 24/81 (29%), Positives = 51/81 (62%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L++S N+ ++ F G+++++KL++ ++ ++ AF G+ ++ EL+L+ N LS+
Sbjct: 223 LEMSGNHFPEIRPGSF--HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280
Query: 119 VPSLIYIP--YLKSINLAHNP 137
+P ++ P YL ++L HNP
Sbjct: 281 LPHDLFTPLRYLVELHLHHNP 301
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 213 (80.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 16 ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFL 75
AS +CP CSC + K V C R +P+GI +T+ L+L NNI ++Q + F
Sbjct: 38 ASAGPQNCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFR 95
Query: 76 QMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINL 133
+ +++ L L + + ++ AF G+ +++ L+L DN L+ +PS Y+ L+ + L
Sbjct: 96 HLH--HLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 153
Query: 134 AHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE-AFYGIDKIDTLKL 181
+NPI I SY+F P + +D+ + SE AF G+ + L L
Sbjct: 154 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 33 AGKRTVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
A T+E D IP G + +++ +L +N I + F + + ++ +L L +
Sbjct: 122 ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLMRLDLGE 179
Query: 90 CK-LEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQS 148
K LE++ + AF G+ N+ L+L + +P+L + L+ + ++ N +I SF
Sbjct: 180 LKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHG 239
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N Q+ I AF G+ + L L N L+SL
Sbjct: 240 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 280
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 24/81 (29%), Positives = 51/81 (62%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L++S N+ ++ F G+++++KL++ ++ ++ AF G+ ++ EL+L+ N LS+
Sbjct: 222 LEMSGNHFPEIRPGSF--HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 279
Query: 119 VPSLIYIP--YLKSINLAHNP 137
+P ++ P YL ++L HNP
Sbjct: 280 LPHDLFTPLRYLVELHLHHNP 300
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 214 (80.4 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+C F++ + ++A+ CP CSC + K V C R +P GI T+ L+
Sbjct: 22 LCVLFLMVQACVEVVAAAGPQGCPTDCSCNNQLSK--VVCTRRGLTRVPPGIPSTTRHLN 79
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L N I +Q + F + +++ L L + + ++ AF G+TN++ L+L DN L+ VP
Sbjct: 80 LMENAIESVQVDSF--RNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVP 137
Query: 121 S--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKID 177
S Y+ L+ + L +NPI I SY+F P + +D+ + + I AF G+ +
Sbjct: 138 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLK 197
Query: 178 TLKL 181
L L
Sbjct: 198 YLNL 201
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/158 (25%), Positives = 77/158 (48%)
Query: 37 TVECIDRNFYTIPEG-IDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKC-KL 92
T+E D +P G + +++ +L +N I + F + + ++ +L L + KL
Sbjct: 125 TLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNR--VPSLMRLDLGELRKL 182
Query: 93 EFVDDRAFRGVTNMDELDLSD-NLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPG 151
E++ D AF G+ N+ L+L N+ +P+ + L+ + ++ N +I SF+
Sbjct: 183 EYISDGAFEGLVNLKYLNLGMCNIRGEMPNFTPLVGLEELEISENLFPEIKPGSFRGLSS 242
Query: 152 IRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + + N QI I AF + + L L N L+SL
Sbjct: 243 LKKLWIMNSQIGLIERNAFDDLASLVELNLAHNNLSSL 280
>FB|FBgn0011828 [details] [associations]
symbol:Pxn "Peroxidasin" species:7227 "Drosophila
melanogaster" [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0004601
"peroxidase activity" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS00436
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
SMART:SM00214 EMBL:AE014296 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0005578 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0006909 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Gene3D:1.10.640.10 HSSP:P05164 GeneTree:ENSGT00550000074325
CTD:5829 ChiTaRS:PXN EMBL:U11052 EMBL:AY051536 EMBL:AY052120
RefSeq:NP_523891.2 RefSeq:NP_728759.1 RefSeq:NP_995975.1
RefSeq:NP_995976.1 RefSeq:NP_995977.1 UniGene:Dm.8030
ProteinModelPortal:Q9VZZ4 SMR:Q9VZZ4 IntAct:Q9VZZ4
MINT:MINT-1680107 STRING:Q9VZZ4 PeroxiBase:3369 PeroxiBase:3370
PaxDb:Q9VZZ4 PRIDE:Q9VZZ4 EnsemblMetazoa:FBtr0072951
EnsemblMetazoa:FBtr0072952 EnsemblMetazoa:FBtr0072953
EnsemblMetazoa:FBtr0072954 GeneID:38326 KEGG:dme:Dmel_CG12002
FlyBase:FBgn0011828 InParanoid:Q9VZZ4 OMA:GGRYECQ OrthoDB:EOG4JWSV8
PhylomeDB:Q9VZZ4 GenomeRNAi:38326 NextBio:808033 Bgee:Q9VZZ4
Uniprot:Q9VZZ4
Length = 1527
Score = 216 (81.1 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 55/178 (30%), Positives = 94/178 (52%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL L V CP GC+C +RTV CI +P+ + DTQ LDL N+I L
Sbjct: 14 LLLLAGGVQSVYCPAGCTCL----ERTVRCIRAKLSAVPK-LPQDTQTLDLRFNHIEELP 68
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYL 128
F G+ + L+L +L ++ D A G+T + + L++N LS +P+ I+ +P L
Sbjct: 69 ANAF--SGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRL 126
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
++I L +N I Q+ + F + P + + M N ++ + + F ++ + L+L+GN +
Sbjct: 127 EAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAI 184
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 214 (80.4 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 55/188 (29%), Positives = 97/188 (51%)
Query: 5 FIL-SVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
F+L SV L LL SCP CSC A V+C ++ ++P I + + LDL++
Sbjct: 2 FVLKSVVLCALLCGAGAQSCPSQCSCSGTA----VDCHGQSLRSVPRNIPRNVERLDLNA 57
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NN+ + K F G+ N++ L L + K+ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 58 NNLTKITKADFA--GLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELL 115
Query: 124 YIPYLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
++ K ++L+ N I I +F+ + I+ + + QI I AF + ++ L L
Sbjct: 116 FLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTL 175
Query: 182 NGNKLASL 189
N N ++ L
Sbjct: 176 NNNNISRL 183
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/166 (27%), Positives = 83/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C + IP+ I T L L++N VL+ IF ++
Sbjct: 488 ACPEKCRCE---GT-TVDCSGQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 541
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
++K+ L K+ +++ F G + ++EL L+ N L V S++ + L+++ L N I
Sbjct: 542 QLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRI 601
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+++ SF +R + + + I ++ AF + + TL L N
Sbjct: 602 SCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLAN 647
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 209 (78.6 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 53/170 (31%), Positives = 92/170 (54%)
Query: 15 LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF 74
LA + A CP CSC +A + V C ++ +P+ I +T+ L+L N+I V++ + F
Sbjct: 51 LAEASPA-CPALCSCSNQASR--VICTKKSLNEVPQSISSNTRYLNLQENSIQVIRSDTF 107
Query: 75 LQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSIN 132
+ +++ L L K ++ ++ AF G+ N+ L+L DN L VPS Y+ L+ +
Sbjct: 108 KHLN--HLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELW 165
Query: 133 LAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEA-FYGIDKIDTLKL 181
L +NPI + +Y+F P +R +D+ + + SEA F G+ + L L
Sbjct: 166 LRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNL 215
Score = 127 (49.8 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 34/138 (24%), Positives = 74/138 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N I ++ F G+ N+ L L +L V +AF ++ + EL L +N +
Sbjct: 114 EILQLSKNQIRQIEVGAF--NGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPI 171
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
T+P+ + +P L+ ++L + IS +F+ +R++++ C + + + +
Sbjct: 172 ETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPN--LTPL 229
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 230 VRLEELELSGNQLGVVRP 247
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKC-KL 92
T+E D +P + + +++ +L +N I L F + + ++++L L + KL
Sbjct: 139 TLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHR--VPSLRRLDLGELRKL 196
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
F+ + AF G+ N+ L+L L VP+L + L+ + L+ N + + SFQ +
Sbjct: 197 SFISEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSL 256
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + +I I AF + ++ L L+ N L SL
Sbjct: 257 RKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSL 293
Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N + V++ F G+ +++KL+L ++ ++ AF + N++EL+LS N L +
Sbjct: 235 LELSGNQLGVVRPGSF--QGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHS 292
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+P ++ P L+ ++L HNP
Sbjct: 293 LPHDLFTPLQQLERVHLNHNP 313
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 213 (80.0 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 50/188 (26%), Positives = 94/188 (50%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ L + L ++L+ A+CP C+C +V+C +P GI + + LDL
Sbjct: 15 RLALGLALASILSGPPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDR 70
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 71 NNITRITKMDFA--GLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELL 128
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ P L ++L+ N I I +F+ G++ + + N I I AF + ++ L L
Sbjct: 129 FQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 182 NGNKLASL 189
N N ++ +
Sbjct: 189 NNNNISRI 196
Score = 149 (57.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 47/165 (28%), Positives = 84/165 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ G V+C ++ IP + T L L+ N+I+VL+ IF ++ N
Sbjct: 505 CPEKCRCE---GT-IVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKKL--PN 558
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L +++ V + AF G + EL L+ N L T+ ++ + LK++ L N I
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLIS 618
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+S+ +F +R + + + +I TI AF + + T+ L N
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/152 (25%), Positives = 78/152 (51%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L N ++++++ F + +++L L K KL+ +
Sbjct: 68 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAF--QDLKQLERLRLNKNKLQVLP 125
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ + LDLS+N + +P + + +K++ L +N I I +F++ +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + KI TL+L+ N L
Sbjct: 186 LTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N ++L L + + + F G+ N+ L L DN +S + + + L+ + L N +
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKL 121
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ FQSTP + +D+S QI I +AF G+ + L+L+ N ++ ++
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 37/165 (22%), Positives = 73/165 (44%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC V+C + IP + + L N+I + F Q
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQY--KK 332
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++++ + K ++ + AF+G+ ++ L L N ++ +P ++ + L+ + L N I+
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ +FQ + + + + ++ TI F + I TL L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN 437
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 213 (80.0 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 50/188 (26%), Positives = 95/188 (50%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ L++ L ++L+ A+CP C+C +V+C +P GI + + LDL
Sbjct: 15 RLALALALASILSGPPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDR 70
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 71 NNITRITKMDFT--GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELL 128
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ P L ++L+ N I I +F+ G++ + + N I I AF + ++ L L
Sbjct: 129 FQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 182 NGNKLASL 189
N N ++ +
Sbjct: 189 NNNNISRI 196
Score = 145 (56.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/152 (26%), Positives = 78/152 (51%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L N ++V+++ F + +++L L K KL+ +
Sbjct: 68 LDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAF--QDLKQLERLRLNKNKLQVLP 125
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ + LDLS+N + +P + + +K++ L +N I I +F++ +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + KI TL+L+ N L
Sbjct: 186 LTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 142 (55.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 46/165 (27%), Positives = 83/165 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ G V+C ++ IP + T L L+ N+I VL+ IF ++ N
Sbjct: 505 CPEKCRCE---GT-IVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKL--PN 558
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L +++ V + AF G + EL L+ N L T+ ++ + LK++ L N I
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLIS 618
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+++ +F +R + + + +I TI AF + + T+ L N
Sbjct: 619 CVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 37/165 (22%), Positives = 74/165 (44%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC V+C + IP + + L N+I + F+Q
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQY--KK 332
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++++ + K ++ + AF+G+ ++ L L N ++ +P ++ + L+ + L N I+
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ +FQ + + + + ++ TI F + I TL L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N ++L L + + + F G+ N+ L L DN +S + + + L+ + L N +
Sbjct: 62 NAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ FQSTP + +D+S QI I +AF G+ + L+L+ N ++ ++
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 213 (80.0 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 50/188 (26%), Positives = 95/188 (50%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ L++ L ++L+ A+CP C+C +V+C +P GI + + LDL
Sbjct: 15 RLALALALASILSGPPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDR 70
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 71 NNITRITKMDFT--GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELL 128
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ P L ++L+ N I I +F+ G++ + + N I I AF + ++ L L
Sbjct: 129 FQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 182 NGNKLASL 189
N N ++ +
Sbjct: 189 NNNNISRI 196
Score = 145 (56.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/152 (26%), Positives = 78/152 (51%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L N ++V+++ F + +++L L K KL+ +
Sbjct: 68 LDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAF--QDLKQLERLRLNKNKLQVLP 125
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ + LDLS+N + +P + + +K++ L +N I I +F++ +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + KI TL+L+ N L
Sbjct: 186 LTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 142 (55.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 46/165 (27%), Positives = 83/165 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ G V+C ++ IP + T L L+ N+I VL+ IF ++ N
Sbjct: 505 CPEKCRCE---GT-IVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKL--PN 558
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L +++ V + AF G + EL L+ N L T+ ++ + LK++ L N I
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLIS 618
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+++ +F +R + + + +I TI AF + + T+ L N
Sbjct: 619 CVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 37/165 (22%), Positives = 74/165 (44%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
SCP CSC V+C + IP + + L N+I + F+Q
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQY--KK 332
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++++ + K ++ + AF+G+ ++ L L N ++ +P ++ + L+ + L N I+
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ +FQ + + + + ++ TI F + I TL L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N ++L L + + + F G+ N+ L L DN +S + + + L+ + L N +
Sbjct: 62 NAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ FQSTP + +D+S QI I +AF G+ + L+L+ N ++ ++
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 208 (78.3 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 49/164 (29%), Positives = 89/164 (54%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
++CP CSC +A + V C ++ +P+ I +T+ L+L N I V++ + F +
Sbjct: 38 STCPAVCSCSNQASR--VICARQHLEEVPDNISNNTRYLNLQENTIQVIKSDTFKHL--R 93
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI--YIPYLKSINLAHNPI 138
+++ L L K ++ ++ AF G+ N++ L+L DN L+ VPS Y+ L+ + L +NPI
Sbjct: 94 HLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPI 153
Query: 139 HQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKIDTLKL 181
+ Y+F P +R +D+ + + I AF G+ + L L
Sbjct: 154 ETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNL 197
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/138 (26%), Positives = 72/138 (52%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L LS N I ++ F G+ N+ L L +L V +AF ++ + EL L +N +
Sbjct: 96 EILQLSKNQIRQIEVGAF--NGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPI 153
Query: 117 STVPSLIY--IPYLKSINLAH-NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
T+P + +P L+ ++L + IS +F +RY+++ C + I + +
Sbjct: 154 ETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIPN--LTPL 211
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L+L+GN+L ++P
Sbjct: 212 VRLEELELSGNRLEIIRP 229
Score = 128 (50.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 TVECIDRNFYTIP-EGIDLDTQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRKCK-L 92
T+E D +P + + +++ +L +N I L F + + ++++L L + K L
Sbjct: 121 TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHR--VPSLRRLDLGELKKL 178
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGI 152
+++ D AF G+ N+ L+L L +P+L + L+ + L+ N + I SFQ +
Sbjct: 179 DYISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESL 238
Query: 153 RYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
R + + + Q+ I AF + ++ L L+ N L SL
Sbjct: 239 RKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSL 275
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+LS N + +++ F G+ +++KL+L ++ ++ AF + N++EL+LS N L +
Sbjct: 217 LELSGNRLEIIRPGSF--QGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHS 274
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+P ++ P L+ ++L HNP
Sbjct: 275 LPHDLFTPLQKLERVHLNHNP 295
>MGI|MGI:1924118 [details] [associations]
symbol:Lrrc52 "leucine rich repeat containing 52"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924118
GO:GO:0016021 GO:GO:0005886 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104451 CTD:440699 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 OMA:YQNARRK
OrthoDB:EOG44MXSK EMBL:BC087947 IPI:IPI00357045
RefSeq:NP_001013400.1 UniGene:Mm.159799 ProteinModelPortal:Q5M8M9
SMR:Q5M8M9 PRIDE:Q5M8M9 Ensembl:ENSMUST00000036643 GeneID:240899
KEGG:mmu:240899 UCSC:uc007dkz.1 InParanoid:Q5M8M9 NextBio:384798
Bgee:Q5M8M9 CleanEx:MM_LRRC52 Genevestigator:Q5M8M9
GermOnline:ENSMUSG00000040485 Uniprot:Q5M8M9
Length = 314
Score = 197 (74.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 56/181 (30%), Positives = 96/181 (53%)
Query: 9 VFLLTL-LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
+ L +L + V+ + CP C C+ + V CID + P I L+T+ L L++N I
Sbjct: 11 LLLFSLGMGLVSGSKCPNKCVCQ----DQEVACIDLHLTEYPADIPLNTRRLYLNNNKIT 66
Query: 68 VLQKEIFLQMG-ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-P-SLIY 124
L LQ+G ++++ L + ++ V D F G+ + LDLS N L+++ P S
Sbjct: 67 SLPA---LQLGFLSDLVYLDCQNNRIREVMDYTFIGIFRLIYLDLSSNNLTSISPFSFSV 123
Query: 125 IPYLKSINLAHNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ L +N++HNP + + Y F +T +RY+D+ N +H I F+ + + TL L+G
Sbjct: 124 LTNLVRLNISHNPHLLYLDKYVFANTTSLRYLDLRNTGLHIIDHNGFHHLVVLQTLYLSG 183
Query: 184 N 184
N
Sbjct: 184 N 184
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 210 (79.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 53/181 (29%), Positives = 94/181 (51%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL+L S +CP CSC G TV+C F ++P I T+ LDL++NN+ +
Sbjct: 19 LLSLFLSGRSGACPPHCSC---TGS-TVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIG 74
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYL 128
K+ F G+ +++ L+L ++ +D AF + +D L L+ N L +P L+++ P L
Sbjct: 75 KDDFA--GLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPAL 132
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ N I I +F+ I+ + + I I AF + ++ L LN N +++
Sbjct: 133 SRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISA 192
Query: 189 L 189
+
Sbjct: 193 I 193
Score = 172 (65.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 45/164 (27%), Positives = 85/164 (51%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ V+C + PE + L T L L++N++++L+ + +T++
Sbjct: 510 CPPKCRCE----ATVVDCSNLRLTKFPEHLPLSTTELRLNNNDLSILEATGLFRP-LTHL 564
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G +++ EL L+ NLL +V ++ + L+ + L +N I
Sbjct: 565 KKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRC 624
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + Q+ TI AF + + TL L N
Sbjct: 625 VHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLAN 668
Score = 117 (46.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + L L DLS NNI ++ + F G T+I+ L L K + ++
Sbjct: 113 LNRNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAF--RGATDIKNLQLDKNHISCIE 170
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPI 138
D AFR + ++ L L++N +S +P S ++P L++ L N +
Sbjct: 171 DGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSL 214
Score = 55 (24.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 152 IRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 785 LQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPP 824
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 201 (75.8 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C + IL + L T+L+ + CP C C A +R+V C R T+PEGI +DT++LDL
Sbjct: 24 CWQPILILMLGTVLSG-SATGCPSRCECS--AQERSVVCHRRKLITLPEGIPIDTRLLDL 80
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
S N + + E FL ++ L L + + ++ AF + + L L +N L +
Sbjct: 81 SKNRLKAINPEEFLNY--PQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQL 138
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
++ + L ++++ N I + Y FQ ++ +++ + + I AF+G+ ++ L
Sbjct: 139 GVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQL 198
Query: 180 KLNGNKLASLKPRTWS 195
+ L S+ +S
Sbjct: 199 TMERCNLTSVPTEAFS 214
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/125 (25%), Positives = 63/125 (50%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L+ N I+V++ F + ++ L LR L+ + F G++N+ LD+S+N +
Sbjct: 102 LQLNENIISVIEPGAF--SNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVI 159
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ ++ + LK + + N + IS +F + + M C + ++ +EAF + +
Sbjct: 160 LLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNL 219
Query: 177 DTLKL 181
TLKL
Sbjct: 220 LTLKL 224
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 38/162 (23%), Positives = 87/162 (53%)
Query: 34 GKRTVECIDRNFYTIPEGI--DLDTQV-LDLSSNNINVLQKEIFLQMGITNIQKLYLRKC 90
G RT+ + N I G+ L LD+S N I +L +F ++ N+++L +
Sbjct: 122 GLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQEL--YNLKELEVGDN 179
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQS 148
L F+ RAF G++++++L + L++VP+ ++ L ++ L H ++ I +SF+
Sbjct: 180 DLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRR 239
Query: 149 TPGIRYIDMSNCQI-HTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ ++++N + ++ +++ +G++ I TL + L ++
Sbjct: 240 LYRLKILEIANWPLLESLTAKSLHGLN-ITTLSITNCNLTAV 280
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 200 (75.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ L++ L ++L+ +CP C+C +V+C +P GI + + LDL
Sbjct: 15 RLALALALASVLSGPPAVACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDR 70
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 71 NNITRITKMDFA--GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELL 128
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ P L ++L+ N I I +F+ ++ + + N I I AF + ++ L L
Sbjct: 129 FQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 182 NGNKLASL 189
N N ++ +
Sbjct: 189 NNNNISRI 196
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/165 (28%), Positives = 83/165 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ G V+C ++ IP + L L+ N ++VL+ IF ++ N
Sbjct: 505 CPEKCRCE---GT-IVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKL--PN 558
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L K++ V + AF G ++ EL L+ N L TV ++ + LK++ L N I
Sbjct: 559 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIG 618
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+S+ +F +R + + + +I TI AF + + T+ L N
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 146 (56.5 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 41/152 (26%), Positives = 78/152 (51%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L N ++V+++ F + +++L L K KL+ +
Sbjct: 68 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAF--QDLKQLERLRLNKNKLQVLP 125
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ + LDLS+N + +P + I +K++ L +N I I +F++ +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + KI TL+L+ N L
Sbjct: 186 LTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 123 (48.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N ++L L + + + F G+ N+ L L DN +S + + + L+ + L N +
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ FQSTP + +D+S QI I +AF GI + L+L+ N ++ ++
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIE 173
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 200 (75.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ L++ L ++L+ +CP C+C +V+C +P GI + + LDL
Sbjct: 15 RLALALALASVLSGPPAVACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDR 70
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF+ + ++ L L+ N L +P L+
Sbjct: 71 NNITRITKMDFA--GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELL 128
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ P L ++L+ N I I +F+ ++ + + N I I AF + ++ L L
Sbjct: 129 FQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTL 188
Query: 182 NGNKLASL 189
N N ++ +
Sbjct: 189 NNNNISRI 196
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/165 (28%), Positives = 83/165 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ G V+C ++ IP + L L+ N ++VL+ IF ++ N
Sbjct: 505 CPEKCRCE---GT-IVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKL--PN 558
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIH 139
++K+ L K++ V + AF G ++ EL L+ N L TV ++ + LK++ L N I
Sbjct: 559 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIG 618
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+S+ +F +R + + + +I TI AF + + T+ L N
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 146 (56.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 41/152 (26%), Positives = 78/152 (51%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L N ++V+++ F + +++L L K KL+ +
Sbjct: 68 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAF--QDLKQLERLRLNKNKLQVLP 125
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ + LDLS+N + +P + I +K++ L +N I I +F++ +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + KI TL+L+ N L
Sbjct: 186 LTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 123 (48.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
N ++L L + + + F G+ N+ L L DN +S + + + L+ + L N +
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ FQSTP + +D+S QI I +AF GI + L+L+ N ++ ++
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIE 173
>UNIPROTKB|A6H789 [details] [associations]
symbol:LRRC3B "Leucine-rich repeat-containing protein 3B"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:BC146155 IPI:IPI00703029
RefSeq:NP_001092865.1 UniGene:Bt.10353 ProteinModelPortal:A6H789
Ensembl:ENSBTAT00000047081 GeneID:783571 KEGG:bta:783571 CTD:116135
eggNOG:NOG282117 GeneTree:ENSGT00390000003913 HOGENOM:HOG000073532
HOVERGEN:HBG052349 InParanoid:A6H789 OMA:PDEADDI OrthoDB:EOG4X3H20
NextBio:20900933 Uniprot:A6H789
Length = 259
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 47/140 (33%), Positives = 71/140 (50%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIFKDLH--QLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>UNIPROTKB|Q96PB8 [details] [associations]
symbol:LRRC3B "Leucine-rich repeat-containing protein 3B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:116135 eggNOG:NOG282117
HOGENOM:HOG000073532 HOVERGEN:HBG052349 OMA:PDEADDI
OrthoDB:EOG4X3H20 EMBL:AF396933 EMBL:AY358282 EMBL:BC040656
EMBL:BC067784 EMBL:BC087849 IPI:IPI00044336 RefSeq:NP_443185.1
UniGene:Hs.517868 ProteinModelPortal:Q96PB8 SMR:Q96PB8
STRING:Q96PB8 PhosphoSite:Q96PB8 DMDM:24211927 PRIDE:Q96PB8
DNASU:116135 Ensembl:ENST00000396641 Ensembl:ENST00000417744
Ensembl:ENST00000456208 GeneID:116135 KEGG:hsa:116135
UCSC:uc003cdp.3 GeneCards:GC03P026640 HGNC:HGNC:28105 HPA:HPA015568
neXtProt:NX_Q96PB8 PharmGKB:PA134962068 InParanoid:Q96PB8
PhylomeDB:Q96PB8 GenomeRNAi:116135 NextBio:79780
ArrayExpress:Q96PB8 Bgee:Q96PB8 CleanEx:HS_LRRC3B
Genevestigator:Q96PB8 GermOnline:ENSG00000179796 Uniprot:Q96PB8
Length = 259
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 47/140 (33%), Positives = 71/140 (50%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIFKDLH--QLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>MGI|MGI:2384996 [details] [associations]
symbol:Lrrc3b "leucine rich repeat containing 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2384996 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:116135 eggNOG:NOG282117 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 OMA:PDEADDI
OrthoDB:EOG4X3H20 EMBL:BC019794 IPI:IPI00122153 RefSeq:NP_666164.1
UniGene:Mm.138039 ProteinModelPortal:Q8VCH9 SMR:Q8VCH9
PhosphoSite:Q8VCH9 PRIDE:Q8VCH9 Ensembl:ENSMUST00000055211
Ensembl:ENSMUST00000163937 GeneID:218763 KEGG:mmu:218763
InParanoid:Q8VCH9 NextBio:376405 Bgee:Q8VCH9 CleanEx:MM_LRRC3B
Genevestigator:Q8VCH9 GermOnline:ENSMUSG00000045201 Uniprot:Q8VCH9
Length = 259
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 47/140 (33%), Positives = 71/140 (50%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
MC +L F+L +L + + CP GC C +G V C + N IP + +T +L
Sbjct: 14 MC--LLLQSFVLMILCFHSASMCPKGCLCS-SSGGLNVTCSNANLKEIPRDLPPETVLLY 70
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTV 119
L SN I + EIF + ++ L L K +EF+D+ AF+GV + LDLSDN + +V
Sbjct: 71 LDSNQITSIPNEIFKDLH--QLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSV 128
Query: 120 PSLIYIPYLKSINLAHNPIH 139
+ +A+NP H
Sbjct: 129 HKNAFNNLKARARIANNPWH 148
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 195 (73.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 55/191 (28%), Positives = 100/191 (52%)
Query: 6 ILSVFLLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
+L + +L LLA QA+ CP C C +R V C +N +P+ I TQ LDL
Sbjct: 13 VLPLLVLLLLAPARQAAAQRCPQACICD--NSRRHVACRYQNLTEVPDAIPELTQRLDLQ 70
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-- 120
N + V+ F G+ ++ L LR C++E V + AFRG+ + L+L+ N L +P
Sbjct: 71 GNLLKVIPAAAF--QGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQE 128
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+L + L+ + L N + ++ +F + + +++++ + + + AF G+ ++ L+
Sbjct: 129 ALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLR 188
Query: 181 LNGNKLASLKP 191
L+ N L+ L P
Sbjct: 189 LSHNALSVLAP 199
Score = 121 (47.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 39/171 (22%), Positives = 76/171 (44%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A CP C C ++ R C +P G DTQ+LDL N+ + + F G+
Sbjct: 394 APCPRACVCVPES--RHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAF--PGLG 449
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS--TVPSLIYIPYLKSINLAHNPI 138
++ L+L+ C + ++ A G+ + L LSDN L+ + +L P L + L N
Sbjct: 450 HLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRF 509
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
Q+ + ++ P + + + + + + + + L+GN++ +
Sbjct: 510 LQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEV 560
Score = 112 (44.5 bits), Expect = 0.00079, P = 0.00079
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 109 LDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIY 166
LDL NLL +P+ + +P+L ++L H + ++ +F+ + +++++ + +
Sbjct: 67 LDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELP 126
Query: 167 SEAFYGIDKIDTLKLNGNKLASLKPRTW 194
EA G+ + L+L GN L L+P T+
Sbjct: 127 QEALDGLGSLRRLELEGNALEELRPGTF 154
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 195 (73.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 55/186 (29%), Positives = 93/186 (50%)
Query: 7 LSVFL-LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
LS+ L L++L V +CP CSC +G TV+C +P I +T+ LDL+ NN
Sbjct: 11 LSLALVLSILNKVAPHACPAQCSC---SGS-TVDCHGLALRIVPRNIPRNTERLDLNGNN 66
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI 125
I + K F G+ +++ L L + K+ ++ AF + ++ L L+ N L P L+++
Sbjct: 67 ITRITKTDFA--GLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFL 124
Query: 126 PYLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
K ++L+ N I I +F+ I+ + + QI I AF + ++ L LN
Sbjct: 125 GTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNN 184
Query: 184 NKLASL 189
N + L
Sbjct: 185 NNITRL 190
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/166 (28%), Positives = 84/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 501 ACPEKCRCE---GT-TVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 554
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ L K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 555 QLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 614
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 615 SCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 660
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 21 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 78
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 79 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 196
Query: 186 LASL 189
L S+
Sbjct: 197 LTSI 200
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ S+++ + L+ I L +
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 317
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 366
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + N++ L LR +L
Sbjct: 73 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFNLRTLGLRSNRL 125
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 126 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 185
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 186 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 216
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 142 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 199
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 200 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 258
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 21 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 78
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 79 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 196
Query: 186 LASL 189
L S+
Sbjct: 197 LTSI 200
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + N++ L LR +L
Sbjct: 73 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFNLRTLGLRSNRL 125
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 126 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 185
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 186 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 216
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 142 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 199
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 200 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 258
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00059
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N + T+ S+++ + L+ I L +
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQL 317
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 366
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 84
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 85 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 202
Query: 186 LASL 189
L S+
Sbjct: 203 LTSI 206
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ S+++ + L+ I L +
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 323
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 372
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + N++ L LR +L
Sbjct: 79 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFNLRTLGLRSNRL 131
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 132 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 191
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 192 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 222
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 148 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 205
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 206 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 264
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 84
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 85 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 202
Query: 186 LASL 189
L S+
Sbjct: 203 LTSI 206
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + N++ L LR +L
Sbjct: 79 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFNLRTLGLRSNRL 131
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 132 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 191
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 192 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 222
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 148 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 205
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 206 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 264
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N +ST+ S+++ + L+ I L +
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 323
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ F+ + ++TL L+ N LA
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 372
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 84
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 85 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 202
Query: 186 LASL 189
L S+
Sbjct: 203 LTSI 206
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 33/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + N++ L LR +L
Sbjct: 79 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFNLRTLGLRSNRL 131
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 132 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 191
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 192 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 222
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 148 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 205
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 206 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 264
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N + T+ S+++ + L+ I L +
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQL 323
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 372
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 198 (74.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 47/174 (27%), Positives = 90/174 (51%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
+T+A CP CSC G V+C R ++P I D + L+L NN+ V+ + F ++
Sbjct: 68 ITEARCPRVCSC---TGLN-VDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRL 123
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAH 135
T ++ L L ++ ++ +F+ + +++ L L++N L +P + L +++++
Sbjct: 124 --TKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISN 181
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
N I + F+ +R + + N QI + AF G+ +++ L LN N L SL
Sbjct: 182 NVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSL 235
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/150 (26%), Positives = 76/150 (50%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGI 79
+ CP C C+ G TV+C R IP I L T L L+ N + + + +F ++
Sbjct: 541 SDCPAMCHCE---GT-TVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRL-- 594
Query: 80 TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNP 137
++ KL L++ +L ++ AF G +++ EL L +N + + + +++ LK++NL N
Sbjct: 595 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
Query: 138 IHQISSYSFQSTPGIRYIDMS----NCQIH 163
I + SF+ + ++++ NC H
Sbjct: 655 ISCVMPGSFEHLNSLTSLNLASNPFNCNCH 684
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 198 (74.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 51/185 (27%), Positives = 92/185 (49%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
K+ +V +L L S CP CSC +G V+C + F T+P GI + + LDL
Sbjct: 6 KYWGTVAVLCGLLSCAVNGCPHKCSC---SGSH-VDCQGQAFKTVPRGIPRNAERLDLDR 61
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
NNI + K F G+ N++ L+L ++ ++ AF G+ ++ + L+ N L +P L+
Sbjct: 62 NNITRITKVDF--SGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELL 119
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ L ++L+ N I + +F+ ++ + + + I I AF + ++ L L
Sbjct: 120 FQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTL 179
Query: 182 NGNKL 186
N N +
Sbjct: 180 NNNNI 184
Score = 153 (58.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/152 (26%), Positives = 80/152 (52%)
Query: 41 IDRNFYTIPEGIDL----DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN T +D + +VL L +N I+V+++ F G+ ++++ L + +L+ +
Sbjct: 59 LDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAF--EGLKQLERIRLNRNRLQVLP 116
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ F+ T + LDLS+N + VP + I +K++ L N I I +F++ +
Sbjct: 117 ELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEI 176
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++N I I +F + K+ TL+L+ N L
Sbjct: 177 LTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 137 (53.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ G V+C + IP + T L L+ N I++L+ + + N+
Sbjct: 497 CPERCRCE---GT-VVDCSNLKLTKIPPHLPEHTTDLRLNDNEISILEATGAFKK-LPNL 551
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L KL + + AF G + EL L+ N L +V ++ + LK++ L N I
Sbjct: 552 RKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISC 611
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + +F +R + + + +I TI AF + + T+ L N
Sbjct: 612 VDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 26/83 (31%), Positives = 49/83 (59%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N I + ++ F GIT ++ L L + ++D AFR + +++ L L++N ++
Sbjct: 129 LDLSENQIQAVPRKAF--RGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITL 186
Query: 119 VP--SLIYIPYLKSINLAHNPIH 139
+P S ++P L+++ L N +H
Sbjct: 187 IPLSSFNHMPKLRTLRLHSNNLH 209
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 198 (74.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 52/181 (28%), Positives = 91/181 (50%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
+L +L V +CP CSC +G TV+C ++P I +T+ LDL+ NNI +
Sbjct: 16 VLAILNKVAPQACPAQCSC---SGS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRIT 71
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK- 129
K F G+ +++ L L + K+ ++ AF+ + ++ L L+ N L P L+++ K
Sbjct: 72 KTDFA--GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKL 129
Query: 130 -SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ N I I +F+ I+ + + QI I AF + ++ L LN N +
Sbjct: 130 YRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITR 189
Query: 189 L 189
L
Sbjct: 190 L 190
Score = 157 (60.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IPE I T L L++N VL+ IF ++
Sbjct: 505 ACPEKCRCE---GT-TVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKL--P 558
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 559 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 618
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 619 TCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 664
Score = 88 (36.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L K +F G+ ++Q L L K+ + AF+ + N++ L L DN L T
Sbjct: 353 LVLYGNKITELPKSLF--EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 410
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+ + P +++++LA NP
Sbjct: 411 IAKGTFSPLRAIQTMHLAQNP 431
Score = 72 (30.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 782 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
>ZFIN|ZDB-GENE-010102-1 [details] [associations]
symbol:dcn "decorin" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] [GO:0050654
"chondroitin sulfate proteoglycan metabolic process" evidence=IDA]
[GO:0060028 "convergent extension involved in axis elongation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
ZFIN:ZDB-GENE-010102-1 InterPro:IPR003591 SMART:SM00369
GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOVERGEN:HBG016052 InterPro:IPR016352 PIRSF:PIRSF002490
GO:GO:0060028 HSSP:Q9BZR6 CTD:1634 KO:K04660 EMBL:BC044206
IPI:IPI00480913 RefSeq:NP_571772.1 UniGene:Dr.76351
ProteinModelPortal:Q803T1 SMR:Q803T1 STRING:Q803T1 PRIDE:Q803T1
GeneID:64698 KEGG:dre:64698 InParanoid:Q803T1 NextBio:20901994
ArrayExpress:Q803T1 Bgee:Q803T1 GO:GO:0050654 Uniprot:Q803T1
Length = 373
Score = 187 (70.9 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 48/170 (28%), Positives = 85/170 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C R +C D T+PE I LDT +LDL +N I +++ F G+ +
Sbjct: 66 CPFRCQCHL----RVAQCSDLGLKTVPEKIPLDTTLLDLQNNKITEIKENDF--KGLKGL 119
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQI 141
Q L L K+ + +AF + N++ L LS NLL VP+ IP L+ + + N I++I
Sbjct: 120 QTLILVNNKITIIHAKAFSSLINLERLYLSKNLLKEVPA--NIPKSLQELRIHENQINKI 177
Query: 142 SSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
SF + +++ + + + + + AF + ++ +++ L S+
Sbjct: 178 KKSSFAGMANVIVMELGSNPLSSSGVDNGAFADLKRVSYIRIADTNLTSI 227
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 191 (72.3 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 50/184 (27%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L S+ S CP C C A +R V C + F +PEGI +T+ LDL N I
Sbjct: 20 LLLMLGSILSGSATGCPPRCECS--AQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIK 77
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + ++ AF + N+ L L N L +P ++ +
Sbjct: 78 TLNQDEFANY--PHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 135
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 136 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 195
Query: 186 LASL 189
L S+
Sbjct: 196 LTSI 199
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/134 (26%), Positives = 72/134 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 141 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 198
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDK 175
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ S YG++
Sbjct: 199 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLN- 257
Query: 176 IDTLKLNGNKLASL 189
+ +L + L S+
Sbjct: 258 LTSLSITHCNLTSI 271
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 195 (73.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 55/185 (29%), Positives = 93/185 (50%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L + LL L + QA CP CSC +G TV+C ++P I +T+ LDL+ NNI
Sbjct: 13 LGLVLLILGEAAPQA-CPAQCSC---SGS-TVDCHGLALRSVPRSIPRNTERLDLNGNNI 67
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIP 126
+ K F G+ +++ L L + K+ ++ AF+ + ++ L L+ N L P L+++
Sbjct: 68 TRITKTDFA--GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLG 125
Query: 127 YLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
K ++L+ N I I +F+ I+ + + QI I AF + ++ L LN N
Sbjct: 126 TSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNN 185
Query: 185 KLASL 189
+ L
Sbjct: 186 NITRL 190
Score = 155 (59.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 505 ACPEKCRCE---GT-TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 558
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ K+ +++ AF G ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 559 QLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 618
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI TI AF + + TL L N
Sbjct: 619 SCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 88 (36.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L K +F G+ ++Q L L K+ + AF+ + N++ L L DN L T
Sbjct: 353 LVLYGNKITELPKSLF--EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 410
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+ + P +++++LA NP
Sbjct: 411 IAKGTFSPLRAIQTMHLAQNP 431
Score = 72 (30.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 782 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 821
>ZFIN|ZDB-GENE-050522-160 [details] [associations]
symbol:lrit2 "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 2" species:7955
"Danio rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-050522-160 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:P07359 EMBL:BC095086 IPI:IPI00493555 RefSeq:NP_001018372.2
UniGene:Dr.82810 ProteinModelPortal:Q504C1 GeneID:553557
KEGG:dre:553557 CTD:340745 HOGENOM:HOG000082676 HOVERGEN:HBG060406
InParanoid:Q504C1 OrthoDB:EOG4X97H6 NextBio:20880298 Uniprot:Q504C1
Length = 561
Score = 189 (71.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 46/172 (26%), Positives = 87/172 (50%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+C F L VF + L S + C GCSC R++ C++ IP+G+ D +
Sbjct: 3 VCVLFHLIVFCI--LISHISSECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIR 60
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
+ + ++ L + +F + ++ L+L + ++ ++ G+ N+ EL L N L +VP
Sbjct: 61 IEKSQLSELPEAVFSH--VKALKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVP 118
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAF 170
+ P LK ++L HN I + ++ + PG+ Y+D+S+ Q+ I + F
Sbjct: 119 WTAFEETPNLKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVF 170
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 194 (73.4 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 51/181 (28%), Positives = 92/181 (50%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
+L++L V +CP CSC +G TV+C ++P I +T+ LDL+ NNI +
Sbjct: 16 VLSILNKVAPQACPAQCSC---SGS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRIT 71
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK- 129
K F G+ +++ L L + ++ ++ AF+ + ++ L L+ N L P L+++ K
Sbjct: 72 KIDFA--GLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKL 129
Query: 130 -SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ N I I +F+ I+ + + QI I AF + ++ L LN N +
Sbjct: 130 YRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITR 189
Query: 189 L 189
L
Sbjct: 190 L 190
Score = 156 (60.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 46/166 (27%), Positives = 83/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 497 ACPEKCRCE---GT-TVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 550
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 551 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 610
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 611 SCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLAN 656
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 188 (71.2 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 54/186 (29%), Positives = 90/186 (48%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L LL +L Q +CP C C GK V C F IPE I +Q L L N+
Sbjct: 18 LLPTLLLVMLTGA-QRACPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY- 124
I L+ F G+ + LYL + VD+ AF+G+ + EL LS N ++ + + +
Sbjct: 73 IQKLKSNQFA--GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFH 130
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+P L++++L++N + + S F+ + + + + + T+ F +D L L
Sbjct: 131 PVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 184 NKLASL 189
N+L SL
Sbjct: 191 NRLRSL 196
Score = 134 (52.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
N+D LDL N L ++ + + LK ++L HN +I+ F +R I +
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+I +I + + L L+GN + ++P T+
Sbjct: 239 NRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTF 273
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I+ + ++ F GI +++L L K+ ++ ++ F V N+ LDLS N L T
Sbjct: 90 LYLDHNYISSVDEDAF--QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 119 VPSLIYIPYLKSI--NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + K I +L N + + FQ + ++D+ ++ ++ AF G+ K+
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + +
Sbjct: 208 KELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
Q L LR ++ + F G+ + L L N +S+V + I LK + L+ N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ + +F P +R +D+S ++ T+ SE F G+ K+ L L N L ++ R +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVF 177
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 188 (71.2 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 51/184 (27%), Positives = 90/184 (48%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 84
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + ++ L L N L +P ++ +
Sbjct: 85 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGL 142
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++++ N I + Y FQ ++ +++ + + I AF G++ ++ L L
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 202
Query: 186 LASL 189
L S+
Sbjct: 203 LTSI 206
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L ++ RAF G+ ++++L L L++
Sbjct: 148 LDISENKIVILLDYMF--QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 205
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGID 174
+P+ L ++ L + L H I+ I YSF+ ++ +++S+ + T+ YG++
Sbjct: 206 IPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 264
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 32/151 (21%), Positives = 77/151 (50%)
Query: 34 GKRTVECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
GK ++ ++++ F + P + L+L+ N ++ ++ F + +++ L LR +L
Sbjct: 79 GKNRIKTLNQDEFASFPH-----LEELELNENIVSAVEPGAF--NNLFSLRTLGLRSNRL 131
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ + F G++N+ +LD+S+N + + ++ + LKS+ + N + IS +F
Sbjct: 132 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 191
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + + C + +I +EA + + L+L
Sbjct: 192 SLEQLTLEKCNLTSIPTEALSHLHSLIVLRL 222
Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPI 138
N+ L + C L V A R + + L+LS N + T+ S+++ + L+ I L +
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQL 323
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ Y+F+ +R +++S Q+ T+ AF+ + ++TL L+ N LA
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLA 372
>UNIPROTKB|Q8N7C0 [details] [associations]
symbol:LRRC52 "Leucine-rich repeat-containing protein 52"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:AK098677 EMBL:AL157714 EMBL:BC132981 EMBL:BC132983
IPI:IPI00297687 RefSeq:NP_001005214.2 UniGene:Hs.664975
ProteinModelPortal:Q8N7C0 SMR:Q8N7C0 DMDM:90185259 PRIDE:Q8N7C0
Ensembl:ENST00000294818 GeneID:440699 KEGG:hsa:440699
UCSC:uc001gde.2 CTD:440699 GeneCards:GC01P165513 HGNC:HGNC:32156
neXtProt:NX_Q8N7C0 PharmGKB:PA142671512 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 InParanoid:Q8N7C0
OMA:YQNARRK OrthoDB:EOG44MXSK PhylomeDB:Q8N7C0 GenomeRNAi:440699
NextBio:109455 Bgee:Q8N7C0 CleanEx:HS_LRRC52 Genevestigator:Q8N7C0
GermOnline:ENSG00000162763 Uniprot:Q8N7C0
Length = 313
Score = 181 (68.8 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 51/172 (29%), Positives = 90/172 (52%)
Query: 18 VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQM 77
V+ + CP C C+ + V C + P I L+T+ L L+ N I L + +
Sbjct: 21 VSGSKCPNNCLCQ----AQEVICTGKQLTEYPLDIPLNTRRLFLNENRITSLPA---MHL 73
Query: 78 GI-TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLA 134
G+ +++ L + ++ V D F GV + LDLS N L+++ + + L +N+A
Sbjct: 74 GLLSDLVYLDCQNNRIREVMDYTFIGVFKLIYLDLSSNNLTSISPFTFSVLSNLVQLNIA 133
Query: 135 HNPIHQIS--SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+NP H +S ++F +T +RY+D+ N + T+ S A Y + ++TL L+GN
Sbjct: 134 NNP-HLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGN 184
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL L CP CSC +G TV+C +P I +T+ LDL+ NNI +
Sbjct: 12 LLVLAGEAAPQPCPAQCSC---SGS-TVDCHGLALRGVPRNIPRNTERLDLNGNNITRIT 67
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYL 128
K F G+ +++ L L + K+ ++ AF+ + ++ L L+ N L + L+++ P L
Sbjct: 68 KTDFA--GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKL 125
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ N I I +F+ I+ + + QI I AF + ++ L LN N +
Sbjct: 126 YRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITR 185
Query: 189 L 189
L
Sbjct: 186 L 186
>ZFIN|ZDB-GENE-080327-13 [details] [associations]
symbol:lrrc3 "leucine rich repeat containing 3"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-13
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731
OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:BX247868 EMBL:CU468760
IPI:IPI00876743 RefSeq:NP_001107114.1 UniGene:Dr.116517
ProteinModelPortal:A8WHP9 Ensembl:ENSDART00000113408
Ensembl:ENSDART00000142888 GeneID:100001372 KEGG:dre:100001372
NextBio:20785015 Bgee:A8WHP9 Uniprot:A8WHP9
Length = 266
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
I + L + SV +CP C C + V+C RN IP + DT L LSSN+
Sbjct: 22 IFRLLLAVICLSVPSFACPKSCHCSERNSLTVVQCSSRNLEEIPPDLPHDTVSLQLSSNH 81
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVT-NMDELDLSDNLLSTVPSLIY 124
I + + F + +Q+L L + +E VD AF+GV+ ++ LDLS N + VP +
Sbjct: 82 ITKIPNQAF--KNLPWLQELDLSRNAIETVDAGAFKGVSESLRTLDLSHNHMQGVPKEAF 139
Query: 125 IPYLKSINLAHNPIH 139
I+L++NP H
Sbjct: 140 ARLHAKISLSNNPWH 154
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 53/186 (28%), Positives = 91/186 (48%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L LL ++ + Q +CP C C GK V C F IPE I +Q L L N+
Sbjct: 17 VLFPTLLLVMLTGAQRACPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY- 124
I L+ F G+ + LYL + VD+ AF+G+ + EL LS N ++ + + +
Sbjct: 73 IQKLKSNQFA--GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFH 130
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+P L++++L++N + + S F+ + + + + + T+ F +D L L
Sbjct: 131 PVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 184 NKLASL 189
N+L SL
Sbjct: 191 NRLRSL 196
Score = 139 (54.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
N+D LDL N L ++ + + LK ++L HN +I+ F +R I +
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+I ++ + + TL L+GN + +++P T+
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTF 273
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I+ + ++ F GI +++L L K+ ++ ++ F V N+ LDLS N L T
Sbjct: 90 LYLDHNYISSVDEDAF--QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 119 VPSLIYIPYLKSI--NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + K I +L N + + FQ + ++D+ ++ ++ AF G+ K+
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + +
Sbjct: 208 KELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
Q L LR ++ + F G+ + L L N +S+V + I LK + L+ N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ + +F P +R +D+S ++ T+ SE F G+ K+ L L N L ++ R +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVF 177
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 53/186 (28%), Positives = 91/186 (48%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L LL ++ + Q +CP C C GK V C F IPE I +Q L L N+
Sbjct: 17 VLFPTLLLVMLTGAQRACPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY- 124
I L+ F G+ + LYL + VD+ AF+G+ + EL LS N ++ + + +
Sbjct: 73 IQKLKSNQFA--GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFH 130
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+P L++++L++N + + S F+ + + + + + T+ F +D L L
Sbjct: 131 PVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 184 NKLASL 189
N+L SL
Sbjct: 191 NRLRSL 196
Score = 139 (54.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
++ F+ +P + + LDLS N + LQ E F G+ + L+LR L+ V R F+
Sbjct: 126 NKTFHPVP-----NLRNLDLSYNKLQTLQSEQF--KGLRKLIILHLRSNSLKTVPIRVFQ 178
Query: 102 GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
N+D LDL N L ++ + + LK ++L HN +I+ F +R I +
Sbjct: 179 DCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+I ++ + + TL L+GN + +++P T+
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTF 273
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I+ + ++ F GI +++L L K+ ++ ++ F V N+ LDLS N L T
Sbjct: 90 LYLDHNYISSVDEDAF--QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 119 VPSLIYIPYLKSI--NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + K I +L N + + FQ + ++D+ ++ ++ AF G+ K+
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + +
Sbjct: 208 KELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
Q L LR ++ + F G+ + L L N +S+V + I LK + L+ N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+ + +F P +R +D+S ++ T+ SE F G+ K+ L L N L ++ R +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVF 177
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 49/189 (25%), Positives = 93/189 (49%)
Query: 7 LSVFLLTLLASV--TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+S L+ +LA + T +CP GC C TVEC IP+GI TQ + L N
Sbjct: 6 MSAVLVLMLAQLCSTSLACPSGCRCY----SLTVECGSIGIKEIPQGITQGTQTIFLQDN 61
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
I +++ +G + LYL+ + ++ AFR + + EL L+ N + + + ++
Sbjct: 62 AIGQIRQRDLSDLG--QLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVF 119
Query: 125 --IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
+ +L+ + LA N I+++ Y+F+ ++ + + + + +A G+ + L L+
Sbjct: 120 RGLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLS 179
Query: 183 GNKLASLKP 191
N L +L P
Sbjct: 180 RNNLRTLSP 188
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 191 (72.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 51/181 (28%), Positives = 90/181 (49%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
+L +L V +CP CSC +G TV+C ++P I +T+ LDL+ NNI +
Sbjct: 16 VLAILNEVAPQACPAQCSC---SGS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRIT 71
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLK- 129
K F G+ +++ L L + K+ ++ AF+ + ++ L L+ N L P L+++ K
Sbjct: 72 KTDFA--GLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKL 129
Query: 130 -SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++L+ N I I +F+ I+ + + I I AF + ++ L LN N +
Sbjct: 130 YRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITR 189
Query: 189 L 189
L
Sbjct: 190 L 190
Score = 88 (36.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L K +F G+ ++Q L L K+ + AF+ + N++ L L DN L T
Sbjct: 355 LVLYGNKITELPKSLF--EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 412
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+ + P +++++LA NP
Sbjct: 413 IAKGTFSPLRAIQTMHLAQNP 433
Score = 72 (30.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 784 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 823
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 51/172 (29%), Positives = 87/172 (50%)
Query: 23 CPL--GCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP GCSC TV C R+ +P G+ +T +L L++N + + F ++
Sbjct: 2 CPSRDGCSCP------TVNCTGRDLSAVPAGLPENTGILLLNANRLLSVSTAAFQKLAA- 54
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQ 140
+Q L L L+ V A + ++ EL LS N L +P+L +P L + LAHN +
Sbjct: 55 -LQDLDLSDNGLQAVLTEA--ALPSLKELLLSHNALEALPALQGLPALTRLALAHNKLQA 111
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
++ +F++ P ++ +D+ + T+ +AF G+ + L L+ N L L PR
Sbjct: 112 LAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEEL-PR 162
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 185 (70.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 50/190 (26%), Positives = 92/190 (48%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C + L + ++ LL T CP C C A ++V C R IPEGI ++T++LDL
Sbjct: 8 CWQPFLGLAVVLLLMGST-IGCPARCECS--AQNKSVSCHRRRLLAIPEGIPIETKILDL 64
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
S N + + E F+ + ++++ L + V+ AF + N+ L L N L VP
Sbjct: 65 SKNRLKSINPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPL 122
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
++ + L ++++ N I + Y FQ ++ +++ + + I AF G+ ++ L
Sbjct: 123 GVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQL 182
Query: 180 KLNGNKLASL 189
L L ++
Sbjct: 183 TLEKCNLTAV 192
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 35/156 (22%), Positives = 76/156 (48%)
Query: 44 NFYTIP-EGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL-EFVDDRAFR 101
N +P E + ++ L ++N+ ++ + +++ L + L + + +
Sbjct: 188 NLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLY 247
Query: 102 GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
G+ N+ L +++ LSTVP L + + YL +NL++NPI I + F ++ + +
Sbjct: 248 GL-NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVG 306
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
Q+ TI +F G+ + L ++ N L +L+ +S
Sbjct: 307 AQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFS 342
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 184 (69.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 51/178 (28%), Positives = 88/178 (49%)
Query: 14 LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEI 73
LL S + CP C C+ GK V C F +PE I + Q L L N+++ +
Sbjct: 22 LLFSSGERMCPYSCHCE---GK-IVHCESSAFQDVPENISVSCQGLSLRYNDLHTMLPYQ 77
Query: 74 FLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSI 131
F + + LYL ++ FVD RAF+GV + EL LS N +S + ++ + +P L+S+
Sbjct: 78 FAHLN--QLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSL 135
Query: 132 NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+L++N + ++ F ++ + + + + I AF ++ L L N+L L
Sbjct: 136 DLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVL 193
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I + F G+ +++L L ++ + + F GV N+ LDLS N L
Sbjct: 87 LYLDHNQIMFVDSRAF--QGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQE 144
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P Y + L++++L N + I +F + ++D+ ++ + AF G+ ++
Sbjct: 145 LQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRL 204
Query: 177 DTLKLNGNKLASL 189
L L N+ + +
Sbjct: 205 MELHLEHNQFSRI 217
Score = 111 (44.1 bits), Expect = 0.00071, P = 0.00071
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS- 117
LDLS N + LQ F G+ +Q L+LR L + RAF +++ LDL N L
Sbjct: 135 LDLSYNKLQELQPGQFY--GLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRV 192
Query: 118 -TVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
T + + + L ++L HN +I+ + F +R + + +I + + +
Sbjct: 193 LTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTL 252
Query: 177 DTLKLNGNKLASLKP 191
L ++GN++ L P
Sbjct: 253 QRLDISGNEIQVLDP 267
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 184 (69.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C +L + LL L + A CP C C A RTV C R IPEGI +T++L+L
Sbjct: 3 CWLHMLGLHLLLLPTAPLAAGCPARCECS--ASTRTVACGRRRLTAIPEGIPAETRMLEL 60
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
S N I L + +++L L + V+ AF + + L L N L +P
Sbjct: 61 SRNRIRCLNPGDLASL--PTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPP 118
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
++ + L ++L+ N + + +SFQ ++ +++ + + I AF G+ + L
Sbjct: 119 GVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAEL 178
Query: 180 KLNGNKLASLKPRT 193
L L SL P +
Sbjct: 179 TLERCNLTSLSPES 192
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 48 IPEGI--DLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVT 104
IP G+ LD+ +LDLS N + +L F + ++Q+L + L F+ RAF G+
Sbjct: 116 IPPGVFTHLDSLTLLDLSENKLVILLDFSF--QDLRSLQRLEVGDNDLVFISRRAFAGLL 173
Query: 105 NMDELDLSD-NLLSTVP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
+ EL L NL S P SL ++ L ++ L H I + +FQ PG+ ++++ N
Sbjct: 174 GLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDN 230
Score = 119 (46.9 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 31/105 (29%), Positives = 57/105 (54%)
Query: 92 LEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQST 149
LE V + RG+ N+ L ++ ++ VP+ L +L +NL+HNPI + SF+
Sbjct: 234 LEEVAPGSLRGL-NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDL 292
Query: 150 PGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+R + ++ + I +AF G+ +I L L+ N L++L+ T+
Sbjct: 293 VRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTF 337
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 184 (69.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 48/190 (25%), Positives = 93/190 (48%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C + IL + L T+L+ + CP C C + +R+V C + ++PEGI +T++LDL
Sbjct: 19 CWQPILILMLGTVLSG-SATGCPSRCECNVQ--ERSVLCHRKKLMSVPEGIPSETRLLDL 75
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
S N I + + F +++L L + + ++ AF + + L L N L +
Sbjct: 76 SKNRIKTINPDEF--SAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQL 133
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
++ + L ++++ N I + Y FQ +R +++ + + I AF+G+ ++ L
Sbjct: 134 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQL 193
Query: 180 KLNGNKLASL 189
L L S+
Sbjct: 194 TLEKCNLTSV 203
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/134 (23%), Positives = 70/134 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L+ N I+ ++ F + +Q L LR KL+ + F G++N+ +LD+S+N +
Sbjct: 97 LELNENTISAIEPGAF--NNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVI 154
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ ++ + L+S+ + N + IS +F + + + C + ++ +EAF + +
Sbjct: 155 LLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSL 214
Query: 177 DTLKLNGNKLASLK 190
TL+L + S++
Sbjct: 215 VTLRLRNLNINSIR 228
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/134 (25%), Positives = 73/134 (54%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LD+S N I +L +F + N++ L + L F+ RAF G++++++L L L++
Sbjct: 145 LDISENKIVILLDYMF--QDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTS 202
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDK 175
VP+ ++ L ++ L + I+ I YSF+ ++ ++++N + T+ + YG++
Sbjct: 203 VPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN- 261
Query: 176 IDTLKLNGNKLASL 189
+ +L + L S+
Sbjct: 262 LTSLTITNANLTSI 275
>UNIPROTKB|F1P1D7 [details] [associations]
symbol:F1P1D7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:AADN02025897 EMBL:AADN02025898 IPI:IPI00574714
ProteinModelPortal:F1P1D7 Ensembl:ENSGALT00000034958 Uniprot:F1P1D7
Length = 413
Score = 180 (68.4 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 7 LSVFLLTLLASVTQ--ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
L+ LL LL ASCP C C TV C NF TIPEGI D++ + L +N
Sbjct: 7 LAELLLMLLGMKVPGAASCPTDCVCY--PSPMTVSCQAHNFVTIPEGIPEDSERIFLQNN 64
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN------LLST 118
I +L + F +T L++ + F+D F G N++ELDL DN +T
Sbjct: 65 QITLLLRGHFSPSMVT----LWIYSNNITFIDPNTFEGFVNLEELDLGDNRYLRALAANT 120
Query: 119 VPSLIYIP--YLKSINLAHNP------IHQISSYSFQSTPGIRYIDMSNCQ--IHTIYSE 168
L+ + YL L+ P +H + +++ ++ + D+ CQ + I+
Sbjct: 121 FQGLVKLHALYLYKCGLSSLPSGIFGGLHTLHTFTCKTPHRVLQDDIF-CQNQLQWIHRR 179
Query: 169 AFYGIDKIDTLKLNGNKLASLK 190
AF+ + ++ TL L N L+ L+
Sbjct: 180 AFHDLRRLTTLFLFNNSLSELQ 201
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 183 (69.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 41/138 (29%), Positives = 81/138 (58%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL ++F + N+++L L KL ++ + F +T + ELDLS N L
Sbjct: 170 LNLGWNSLVVLPDKVFHDL--PNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKG 227
Query: 119 VPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ I++ L+ + L +N I+ I+ +F +R++D+S+ ++ ++Y + F G+ +
Sbjct: 228 IKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSL 287
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L+ N + SL+PRT+
Sbjct: 288 HVLRLSTNSITSLRPRTF 305
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 36/134 (26%), Positives = 73/134 (54%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N + ++ IF+++ +QKLYL ++ + RAF G+ ++ LDLS N L++
Sbjct: 218 LDLSGNALKGIKINIFVKL--QKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTS 275
Query: 119 V--PSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + + + L + L+ N I + +F+ + + + + +I ++ F G+ ++
Sbjct: 276 LYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQL 335
Query: 177 DTLKLNGNKLASLK 190
+ L LN N+L +K
Sbjct: 336 EVLSLNNNQLQDIK 349
Score = 134 (52.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L +L+ + AF G+ N+ + LS N + T
Sbjct: 314 LQLGHNRIWSLAERTF--DGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKT 371
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + +I + +F S +R + + + I TI ++F + ++
Sbjct: 372 LPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHEL 431
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L+ L P+
Sbjct: 432 LELDLKHNRLSHLSPQ 447
Score = 131 (51.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/172 (23%), Positives = 77/172 (44%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP C+C + + V C RN +P+ + + + L NN L F ++
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAF--RNLS 93
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-P-SLIYIPYLKSINLAHNPI 138
+ L L+ +L V+ AF G+ ++ L L N L + P + ++ L S++L +N
Sbjct: 94 GLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLF 153
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
++ F + Y+++ + + + F+ + + L L GNKL L+
Sbjct: 154 SKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQ 205
Score = 130 (50.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/141 (23%), Positives = 72/141 (51%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+VL L++N + ++ FL G+ N+ ++L ++ + + F GVT + L L + L
Sbjct: 336 EVLSLNNNQLQDIKAGAFL--GLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCL 393
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
S + + + + L+ + L HN I I SF+ + +D+ + ++ + + F G+
Sbjct: 394 SKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLS 453
Query: 175 KIDTLKLNGNKLASLKPRTWS 195
++ L L+ N++ + T+S
Sbjct: 454 NLEYLFLSFNQIMDISQNTFS 474
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/134 (27%), Positives = 65/134 (48%)
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
V+ LS+N I L + +F G+T + L+L L + F +T++ L L N +S
Sbjct: 361 VMHLSANCIKTLPEYVF--EGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAIS 418
Query: 118 TVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
T+ + + L ++L HN + +S F + Y+ +S QI I F + +
Sbjct: 419 TIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRR 478
Query: 176 IDTLKLNGNKLASL 189
+ L L+ N+LA+L
Sbjct: 479 LFWLDLSHNQLATL 492
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/135 (24%), Positives = 70/135 (51%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L++N IN + F MG+ +++ L L +L + + F G+ ++ L LS N +
Sbjct: 240 QKLYLNNNQINAIAPRAF--MGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSI 297
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+++ + + +L+ + L HN I ++ +F + + ++N Q+ I + AF G+
Sbjct: 298 TSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLY 357
Query: 175 KIDTLKLNGNKLASL 189
+ + L+ N + +L
Sbjct: 358 NVAVMHLSANCIKTL 372
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 37/169 (21%), Positives = 76/169 (44%)
Query: 24 PLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQ 83
P W G + F + G+D LDL S+ + +++ F G+ ++
Sbjct: 68 PTNAKAIWLDGNNFTQLPAAAFRNL-SGLDF----LDLQSSQLAAVEQHAF--HGLRSLY 120
Query: 84 KLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQI 141
L+L + +L+++ F N+ L L++NL S V ++ + L +NL N + +
Sbjct: 121 HLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVL 180
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
F P +R + ++ ++ + + F + ++ L L+GN L +K
Sbjct: 181 PDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIK 229
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 37/145 (25%), Positives = 78/145 (53%)
Query: 47 TIPEGI-DLDTQV--LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGV 103
T+PE + + T++ L L + ++ ++ F +T++++L+L+ + ++D++FR +
Sbjct: 371 TLPEYVFEGVTKLHSLHLEHSCLSKIRANTF--SSLTSLRRLFLQHNAISTIEDQSFREL 428
Query: 104 TNMDELDLSDNLLSTV-PSL-IYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ 161
+ ELDL N LS + P L + + L+ + L+ N I IS +F + ++D+S+ Q
Sbjct: 429 HELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQ 488
Query: 162 IHTIYSEAFYGIDKIDTLKLNGNKL 186
+ T+ + + + L L N L
Sbjct: 489 LATLDNAVITQLANLRYLSLRNNSL 513
>RGD|1359311 [details] [associations]
symbol:Tsku "tsukushi, small leucine rich proteoglycan"
species:10116 "Rattus norvegicus" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021670 "lateral ventricle development"
evidence=IEA;ISO] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=ISO] [GO:0061073 "ciliary body morphogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1359311 GO:GO:0005576 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 CTD:25987
HOGENOM:HOG000001578 HOVERGEN:HBG054643 KO:K08130 OrthoDB:EOG4V171F
EMBL:AY533242 EMBL:BC100644 IPI:IPI00368445 RefSeq:NP_001009965.1
UniGene:Rn.8672 ProteinModelPortal:Q6QMY6 STRING:Q6QMY6
PRIDE:Q6QMY6 GeneID:308843 KEGG:rno:308843 UCSC:RGD:1359311
InParanoid:Q6QMY6 NextBio:659638 Genevestigator:Q6QMY6
GermOnline:ENSRNOG00000027784 Uniprot:Q6QMY6
Length = 353
Score = 178 (67.7 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 56/199 (28%), Positives = 97/199 (48%)
Query: 6 ILSVFLLTLLASVTQASCPL--GCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDT 56
+ ++FLL L + Q + P GC C+ + V+C + +P I LDT
Sbjct: 2 LCTLFLLLLALGIVQTTRPCFPGCQCEEETFGLFDSFSLIRVDCSSLGPHIVPVPIPLDT 61
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
LDLSSN + + + + G T + L L L + AF + ++ LDLS N L
Sbjct: 62 AHLDLSSNRLETVNESVLGGPGYTTLAGLDLSHNLLTSITPTAFSRLRYLESLDLSHNGL 121
Query: 117 STVPSLIYIPY-LKSINLAHNPIHQ--ISSYSFQSTPGIRYIDMSNCQIHTI--Y-SEAF 170
+ +P+ ++ L INL+HN + + IS+++ S ++D+S+ IH + Y + A
Sbjct: 122 AALPAEVFTSSPLSDINLSHNRLREVSISAFTTHSQGRALHVDLSHNLIHRLLPYPARAS 181
Query: 171 YGIDKIDTLKLNGNKLASL 189
I +L L+ N+L ++
Sbjct: 182 LSAPTIQSLNLSWNRLRAV 200
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/186 (27%), Positives = 88/186 (47%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
I LLT+L+S + CP GC C+ GK V C + IP I L L N+
Sbjct: 18 IAPTVLLTMLSSA-ERGCPKGCRCE---GKM-VYCESQKLQEIPSSISAGCLGLSLRYNS 72
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI 125
+ L+ F G+ + LYL + +D+ AF G+ + EL LS N +S + +
Sbjct: 73 LQKLKYNQF--KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFR 130
Query: 126 PY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
P L++++L++N +H + S F+ + + + + + TI F ++ L L
Sbjct: 131 PVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGY 190
Query: 184 NKLASL 189
N++ SL
Sbjct: 191 NRIRSL 196
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N+I+ + + F GI +++L L ++ + + FR VTN+ LDLS N L +
Sbjct: 90 LYLDHNHISNIDENAF--NGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHS 147
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + + L S++L N + I FQ + +D+ +I ++ F G+ ++
Sbjct: 148 LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + L
Sbjct: 208 KELHLEHNQFSKL 220
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 85 LYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQIS 142
L LR L+ + F+G+ + L L N +S + + I LK + L+ N I
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 143 SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
+ +F+ +R +D+S Q+H++ SE F G+ K+ +L L N L ++ R
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVR 175
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LLT+L+S + CP GC C+ GK V C + IP I L L N++ L+
Sbjct: 23 LLTMLSSA-ERGCPKGCRCE---GKM-VYCESQKLQEIPSSISAGCLGLSLRYNSLQKLK 77
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--L 128
F G+ + LYL + +D+ AF G+ + EL LS N +S + + P L
Sbjct: 78 YNQF--KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNL 135
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++++L++N +H + S F+ + + + + + TI F ++ L L N++ S
Sbjct: 136 RNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS 195
Query: 189 L 189
L
Sbjct: 196 L 196
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N+I+ + + F GI +++L L ++ + + FR VTN+ LDLS N L +
Sbjct: 90 LYLDHNHISNIDENAF--NGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHS 147
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + + L S++L N + I FQ + +D+ +I ++ F G+ ++
Sbjct: 148 LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + L
Sbjct: 208 KELHLEHNQFSKL 220
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 85 LYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQIS 142
L LR L+ + F+G+ + L L N +S + + I LK + L+ N I
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 143 SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
+ +F+ +R +D+S Q+H++ SE F G+ K+ +L L N L ++ R
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVR 175
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 181 (68.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LLT+L+S + CP GC C+ GK V C + IP I L L N++ L+
Sbjct: 23 LLTMLSSA-ERGCPKGCRCE---GKM-VYCESQKLQEIPSSISAGCLGLSLRYNSLQKLK 77
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--L 128
F G+ + LYL + +D+ AF G+ + EL LS N +S + + P L
Sbjct: 78 YNQF--KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNL 135
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
++++L++N +H + S F+ + + + + + TI F ++ L L N++ S
Sbjct: 136 RNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS 195
Query: 189 L 189
L
Sbjct: 196 L 196
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N+I+ + + F GI +++L L ++ + + FR VTN+ LDLS N L +
Sbjct: 90 LYLDHNHISNIDENAF--NGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHS 147
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S + + L S++L N + I FQ + +D+ +I ++ F G+ ++
Sbjct: 148 LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRL 207
Query: 177 DTLKLNGNKLASL 189
L L N+ + L
Sbjct: 208 KELHLEHNQFSKL 220
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 85 LYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQIS 142
L LR L+ + F+G+ + L L N +S + + I LK + L+ N I
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 143 SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
+ +F+ +R +D+S Q+H++ SE F G+ K+ +L L N L ++ R
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVR 175
>ZFIN|ZDB-GENE-040704-74 [details] [associations]
symbol:bgna "biglycan a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-040704-74 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 HOGENOM:HOG000261690
HOVERGEN:HBG016052 InterPro:IPR016352 PIRSF:PIRSF002490
EMBL:BX248385 EMBL:BC074062 IPI:IPI00493881 RefSeq:NP_001002227.1
UniGene:Dr.28930 SMR:Q6GMI5 STRING:Q6GMI5
Ensembl:ENSDART00000027225 GeneID:431774 KEGG:dre:431774 CTD:431774
InParanoid:Q6GMI5 OMA:TFRCVSD NextBio:20831003 Uniprot:Q6GMI5
Length = 369
Score = 177 (67.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C+ R V+C D +P I DT +LDL SN I +++ F G++N
Sbjct: 63 TCPFGCRCEL----RVVQCSDLGLGYVPYDIPADTLLLDLQSNRITEIREGDF--KGLSN 116
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L LR ++ + +AF + + +L +S NLL+++P +P L + + N I +
Sbjct: 117 LYALVLRYNQISKIHPKAFLPLKRLQKLYISHNLLTSMPK--NLPSSLVELRIHDNRIKK 174
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLASL 189
+ ++SF + I+M + E AF G+ K++ L+++ KL +
Sbjct: 175 VPAFSFSGLHNMHVIEMGRNPLQNSGFEPGAFMGL-KLNYLRISEAKLTGV 224
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 179 (68.1 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 46/189 (24%), Positives = 95/189 (50%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
K ++ V L + + V SCP C C + K T+ C + IP I + +Q + L +
Sbjct: 10 KLLILVLCLNIQSEVE--SCPGACVC-YSEPKITISCQQQGLTAIPTEIPIQSQRIFLHN 66
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTVPSL 122
N I +++ F N+ L++ + ++ AF G+ ++ELDLSDN L ++ +
Sbjct: 67 NKITLVRSTSFTSC--RNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPV 124
Query: 123 IY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+ + +L +++L + ++S+ F+ ++Y+ + + + + + F + + L
Sbjct: 125 TFRGLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLF 184
Query: 181 LNGNKLASL 189
L+GNK+ SL
Sbjct: 185 LHGNKIKSL 193
>MGI|MGI:2444277 [details] [associations]
symbol:Islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2444277 GO:GO:0016021 GO:GO:0005886
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 HSSP:Q9BZR6 CTD:57611
eggNOG:NOG240332 HOGENOM:HOG000113108 HOVERGEN:HBG100863
OrthoDB:EOG4QC14W EMBL:EU497918 EMBL:AK129367 EMBL:BC059068
EMBL:BC096531 IPI:IPI00420535 RefSeq:NP_001155007.1
RefSeq:NP_001155008.1 RefSeq:NP_001155009.1 RefSeq:NP_001155010.1
RefSeq:NP_001155011.1 RefSeq:NP_001155012.1 RefSeq:NP_001155013.1
RefSeq:NP_796167.2 UniGene:Mm.186499 ProteinModelPortal:Q5RKR3
SMR:Q5RKR3 STRING:Q5RKR3 PhosphoSite:Q5RKR3 PaxDb:Q5RKR3
PRIDE:Q5RKR3 Ensembl:ENSMUST00000114144 Ensembl:ENSMUST00000163897
Ensembl:ENSMUST00000165276 Ensembl:ENSMUST00000170421 GeneID:320563
KEGG:mmu:320563 UCSC:uc009pwl.1 GeneTree:ENSGT00700000104028
InParanoid:Q5RKR3 NextBio:396975 Bgee:Q5RKR3 Genevestigator:Q5RKR3
Uniprot:Q5RKR3
Length = 745
Score = 181 (68.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 15 LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF 74
L V +A CP C+C K + +C + +PEG+ + L LS+N I VL++ F
Sbjct: 13 LLGVVRA-CPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAF 71
Query: 75 LQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSIN 132
+ +T + L+L ++ V+ A ++ + LDLS NL+S P L + L+ +
Sbjct: 72 VN--VTQVTSLWLAHSEVRTVESGALAVLSQLKNLDLSHNLISNFPWSDLRNLSALQLLK 129
Query: 133 LAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ HN + + + + P +R + ++N ++ T+ F + + L+L N
Sbjct: 130 MNHNRLGSLPRDALGALPDLRSLRINNNRLRTLEPGTFDALSALSHLQLYHN 181
>RGD|1561726 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1561726 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 GeneTree:ENSGT00700000104451
CTD:219527 eggNOG:NOG244842 HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS
EMBL:BC099134 IPI:IPI00362839 RefSeq:NP_001116447.1
UniGene:Rn.209245 ProteinModelPortal:Q4KLL3
Ensembl:ENSRNOT00000031745 GeneID:311171 KEGG:rno:311171
UCSC:RGD:1561726 InParanoid:Q4KLL3 NextBio:663112
Genevestigator:Q4KLL3 Uniprot:Q4KLL3
Length = 311
Score = 173 (66.0 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 54/188 (28%), Positives = 96/188 (51%)
Query: 3 HKFILSVFLLT---LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVL 59
H +L VF L ++ S ASCP+ C+C+ + V+C ++ +++P + +DT+ L
Sbjct: 28 HSALLLVFFLLAAGVMHSDAGASCPVLCTCR----NQVVDCSNQRLFSVPPDLPMDTRNL 83
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
L+ N I + +L + ++ L LR L + F + LDLS N LS V
Sbjct: 84 SLAHNRIAAVPPG-YLTCYM-ELRVLDLRNNSLMELPPGLFLHAKRLAHLDLSYNNLSHV 141
Query: 120 PSLIYIPY--LKSINLAHNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
P+ ++ L I+L+HNP + ++ +FQ +R +D+S + + EA G+ +
Sbjct: 142 PADMFREAHGLVHIDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLSLEALEGLPGL 201
Query: 177 DTLKLNGN 184
TL++ GN
Sbjct: 202 VTLQIGGN 209
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 177 (67.4 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 11 LLTLLASVTQ--ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LL LLA + CP C C + A TV C NF IPEGI D++ + L +N+I +
Sbjct: 11 LLLLLAGELPLGSGCPRDCVC-YPA-PMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITL 68
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
L++ F +T L++ + F+D F+G +++ELDL DN L + P +
Sbjct: 69 LRQGHFSPAMVT----LWIYSNNITFIDPNTFQGFVHLEELDLGDNRQLRTLAPETFQGL 124
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++ L + + + F ++Y+ + + I + + F + + L L+GNK
Sbjct: 125 VKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNK 184
Query: 186 LASLKPRTW 194
L SL T+
Sbjct: 185 LWSLGQDTF 193
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 59 LDLSSNN-INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
LDL N + L E F G+ + LYL KC L + F G+ ++ L L DN +
Sbjct: 105 LDLGDNRQLRTLAPETF--QGLVKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIE 162
Query: 118 TVPSLIYIPYLKSINLAHNPIHQISSYSF-QST-PGIRYID---MSNCQIHTIYSEAFYG 172
+ I++ +NL+H +H +S Q T G+ +D + Q+ ++ +AF+
Sbjct: 163 YLQDDIFVDL---VNLSHLFLHGNKLWSLGQDTFRGLVNLDRLLLHENQLQWVHHKAFHD 219
Query: 173 IDKIDTLKLNGNKLASL 189
+ ++ TL L N L+ L
Sbjct: 220 LRRLTTLFLFNNSLSEL 236
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 182 (69.1 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
C CSC G R V+C + +PEG+ TQ+LD+S NNI L ++ F +
Sbjct: 112 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQLLDISMNNITQLPEDAFKNFPF--L 166
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQ 140
++L L L F+ +A G+ + L L +N L TVPS + + L+S+ L N I
Sbjct: 167 EELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITS 226
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + + + + L L NK++S+
Sbjct: 227 VPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSI 275
Score = 160 (61.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++++Q L L + V + +F G+T + L L DN
Sbjct: 189 ELKVLTLQNNQLKTVPSEAI--RGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDN 246
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 247 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG 306
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 307 LDNLETLDLNYNNL 320
Score = 130 (50.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G ++ L L K+ + + + + LDLS N + +PS L+ I+L N
Sbjct: 400 GTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPSFNGCHALEEISLQRNQ 459
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
IHQI +FQ ++ +D+S IH I AF + I L ++ N+L S
Sbjct: 460 IHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTS 510
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ N I+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 263 QALTLALNKISSIPDFAFTNL--SSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 320
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P ++ I + + + + + AF+ + +
Sbjct: 321 GEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSE 380
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G + P
Sbjct: 381 LHSLVIRGASMVQRFP 396
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 181 (68.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 48/169 (28%), Positives = 81/169 (47%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
C CSC G R V+C + +PEG+ TQ LD+S NNI L ++ F +
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPF--L 83
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQ 140
++L L L F+ +A G+ + L L +N L TVPS + + L+S+ L N I
Sbjct: 84 EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 143
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + + + + L L NK++S+
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSI 192
Score = 154 (59.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 106 ELKVLTLQNNQLKTVPSEAI--RGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 164 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG 223
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 224 LDNLETLDLNYNNL 237
Score = 129 (50.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + + + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I+QI +FQ +R +D+S IH I+S AF + I L ++ N+L S
Sbjct: 377 IYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTS 427
Score = 123 (48.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ N I+ + F + +++ L+L K+ + F G+ N++ LDL+ N L
Sbjct: 180 QALTLALNKISSIPDFAFTNL--SSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNL 237
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 238 GEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G + P
Sbjct: 298 LHSLVIRGASMVQQFP 313
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 178 (67.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/185 (25%), Positives = 92/185 (49%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L+V L+ + +++ CP C C A ++V C R IPEGI ++T++LDLS N +
Sbjct: 15 LAVVLIFMGSTI---GCPARCECS--AQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRL 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY-- 124
+ E F+ + ++++ L + V+ AF + N+ L L N L VP ++
Sbjct: 70 KSVNPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTG 127
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L ++++ N I + Y FQ ++ +++ + + I AF G+ ++ L L
Sbjct: 128 LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKC 187
Query: 185 KLASL 189
L ++
Sbjct: 188 NLTAV 192
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 35/156 (22%), Positives = 76/156 (48%)
Query: 44 NFYTIP-EGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL-EFVDDRAFR 101
N +P E + ++ L ++N+ ++ + +++ L + L + + +
Sbjct: 188 NLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLY 247
Query: 102 GVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
G+ N+ L +++ LSTVP L + + YL +NL++NPI I + F ++ + +
Sbjct: 248 GL-NLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVG 306
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
Q+ TI +F G+ + L ++ N L +L+ +S
Sbjct: 307 AQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFS 342
>UNIPROTKB|E1C5R1 [details] [associations]
symbol:LOC428618 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 OMA:RRLYISH EMBL:AADN02001982
IPI:IPI00573069 RefSeq:XP_426175.3 ProteinModelPortal:E1C5R1
Ensembl:ENSGALT00000024034 GeneID:428618 KEGG:gga:428618
Uniprot:E1C5R1
Length = 512
Score = 176 (67.0 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/183 (28%), Positives = 95/183 (51%)
Query: 7 LSVFLLTLLASVTQAS--CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
LS L+ L +S++ S CP CSC ++V+C + IP I T+ L +S +
Sbjct: 3 LSYLLVLLFSSLSGLSTTCPRRCSCD---PAQSVQCYRAS--EIPREIPFTTRRLYISHS 57
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
I LQ F +M +++L L E +++ F+ ++++ L+L N L +P I+
Sbjct: 58 KIKQLQITDFRRMSA--LEELVLSCSGTESIENNTFKALSSLKSLELYKNQLKQIP--IF 113
Query: 125 IPY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+P L+ + LA N I+ + + F+ +R +D+ N I T+ S AF + + +L L+G
Sbjct: 114 LPSGLEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCNLQSLILDG 173
Query: 184 NKL 186
N +
Sbjct: 174 NNM 176
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 177 (67.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/138 (31%), Positives = 79/138 (57%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL F G+ N+++L L KL ++ F G+ + ELDLS N L +
Sbjct: 175 LNLGWNSLAVLPDTAF--HGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS 232
Query: 119 VPSLIYI--PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + +++ P L+ + L HN + ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 VKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N LASL+PRT+
Sbjct: 293 HVLRLAHNALASLRPRTF 310
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 46/173 (26%), Positives = 83/173 (47%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP CSC + +V C RN +P+GI + L L SNN + + F ++
Sbjct: 41 CPAACSCGHDDYTDELSVFCSSRNLTQLPDGIPDAARALWLDSNNFSSVPAGAF--RNLS 98
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L N L ++ + ++ P L S+ L +N +
Sbjct: 99 SLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLL 158
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ FQ + +++ + + AF+G+ + L L GNKL L+P
Sbjct: 159 SRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQP 211
Score = 136 (52.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN---- 114
LDLS N + ++ +F+++ +QKLYL L V AF G+ + LDLS N
Sbjct: 223 LDLSRNALRSVKANVFVKL--PKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGG 280
Query: 115 -LLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
L T P L+ + L+ LAHN + + +F+ + + + + ++ + +AF G+
Sbjct: 281 LLEDTFPGLLGLHVLR---LAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGL 337
Query: 174 DKIDTLKLNGNKLASLK 190
+++ L LN N++ +K
Sbjct: 338 GQLEVLALNDNQIQEIK 354
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/136 (23%), Positives = 70/136 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N + L ++ F G+ ++ L L +++ + AF G+ N+ ++LS N L
Sbjct: 319 LQLGHNRLRQLPEKAF--EGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRN 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + ++ ++F G+R + + + + I ++ +G+ ++
Sbjct: 377 LPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L R
Sbjct: 437 LELDLTANRLTHLPGR 452
Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 35/138 (25%), Positives = 72/138 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L +N ++ +++ +F G+TN+ L L L + D AF G+ N+ EL L+ N L+
Sbjct: 151 LGLHNNLLSRVEEGLF--QGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTY 208
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P+L + L+ ++L+ N + + + F P ++ + + + + + AF G+ +
Sbjct: 209 LQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKAL 268
Query: 177 DTLKLNGNKLASLKPRTW 194
L L+ N++ L T+
Sbjct: 269 RWLDLSHNRVGGLLEDTF 286
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 177 (67.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 41/138 (29%), Positives = 80/138 (57%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL F G+ +++L L KL ++ F G+ + ELDLS N L +
Sbjct: 179 LNLGWNSLTVLPDTAF--QGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRS 236
Query: 119 VPSLIYI--PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + +++ P L+ + L HN + ++ +F +R++D+S+ ++ ++ ++F G+ +
Sbjct: 237 VKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGL 296
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L+ N LA L+PRT+
Sbjct: 297 HVLRLSHNVLAGLRPRTF 314
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP CSC + +V C RN +P G+ T+ L L NN + + F ++
Sbjct: 45 CPAVCSCGHDDFTDELSVFCSSRNLTQLPGGLPPGTRALWLDGNNFSSIPAAAF--RNLS 102
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
+ L L+ L ++ +A G+ + L L N L + + ++ P L S+ L++N +
Sbjct: 103 GLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLL 162
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ F+ + +++ + + AF G+ + L L GNKLA L+P
Sbjct: 163 SRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQP 215
Score = 137 (53.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/138 (27%), Positives = 73/138 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N + ++ +F+++ +QKLYL + V AF G+ + LDLS N + +
Sbjct: 227 LDLSRNTLRSVKANVFVKL--PKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGS 284
Query: 119 V-----PSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
+ P L+ + L+ L+HN + + +F+ + + + + ++ + EAF G+
Sbjct: 285 LLEDSFPGLLGLHVLR---LSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGL 341
Query: 174 DKIDTLKLNGNKLASLKP 191
+++ L LN N+L L+P
Sbjct: 342 GQLEVLALNDNQLQELRP 359
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N + L ++ F G+ + L L L + R F+ + ++EL L N L
Sbjct: 275 LDLSHNRVGSLLEDSF--PGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQ 332
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS-NCQIHTIYSEAFYGIDK 175
+P + + L+ + L N + ++ F + +++S NC + + AF G+ K
Sbjct: 333 LPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNC-LRDLPERAFQGLAK 391
Query: 176 IDTLKLNGNKLASLKP 191
+ +L L G LA L P
Sbjct: 392 LHSLHLEGGCLARLGP 407
Score = 111 (44.1 bits), Expect = 0.00077, P = 0.00077
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 34 GKRTVECIDRNFYTIPEGIDLDTQ---VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKC 90
G R + NF +IP + L+L + + L+ + L G+ + L+L
Sbjct: 79 GTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALL--GLRGLCHLHLEHN 136
Query: 91 KLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQS 148
+L + F + L LS+NLLS + ++ + +L +NL N + + +FQ
Sbjct: 137 RLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQG 196
Query: 149 TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
G+R + ++ ++ + F G+ ++ L L+ N L S+K
Sbjct: 197 LAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVK 238
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 174 (66.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 11 LLTLLASVTQ--ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LL L+A+ CP C C + A TV C NF IPEGI +D++ + L +N I +
Sbjct: 11 LLLLVAAELPLGGGCPRDCVC-YPA-PMTVSCQAHNFAAIPEGIPVDSERVFLQNNRIGL 68
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
LQ F +T L++ + ++ F G +++ELDL DN L + P +
Sbjct: 69 LQPGHFSPAMVT----LWIYSNNITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQGL 124
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++ L + + + F ++Y+ + + I + + F + + L L+GNK
Sbjct: 125 VKLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNK 184
Query: 186 LASLKPRTW 194
L SL P T+
Sbjct: 185 LWSLGPGTF 193
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 50 EGIDLDTQVLDLSSNN-INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDE 108
EG + + LDL N + L E F G+ + LYL KC L + F G+ ++
Sbjct: 97 EGF-VHLEELDLGDNRQLRTLAPETF--QGLVKLHALYLYKCGLSALPAGVFGGLHSLQY 153
Query: 109 LDLSDNLLSTVPSLIYIPYLKSINLAH-----NPIHQISSYSFQSTPGIRYIDMSNCQIH 163
L L DN + + I++ +NL+H N + + +F+ + + + Q+
Sbjct: 154 LYLQDNHIEYLQDDIFVDL---VNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQ 210
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLK 190
++ +AF+ + ++ TL L N L+ L+
Sbjct: 211 WVHHKAFHDLRRLTTLFLFNNSLSELQ 237
>MGI|MGI:2685197 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685197 GO:GO:0016021
GO:GO:0005886 InterPro:IPR000483 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000113369
GeneTree:ENSGT00700000104451 CTD:219527 eggNOG:NOG244842
HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS EMBL:AK134968 IPI:IPI00352775
RefSeq:NP_001028518.1 UniGene:Mm.291095 UniGene:Mm.476412
ProteinModelPortal:Q3UY51 SMR:Q3UY51 PhosphoSite:Q3UY51
PRIDE:Q3UY51 Ensembl:ENSMUST00000099930 Ensembl:ENSMUST00000111601
GeneID:241528 KEGG:mmu:241528 UCSC:uc008kkc.1 InParanoid:Q3UY51
OMA:TANCCHR NextBio:385045 Bgee:Q3UY51 CleanEx:MM_LRRC55
Genevestigator:Q3UY51 Uniprot:Q3UY51
Length = 311
Score = 170 (64.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 55/189 (29%), Positives = 96/189 (50%)
Query: 3 HKFILSVFLLTLLASVTQA----SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQV 58
H +L VF L L A V + SCP+ C+C+ + V+C ++ +++P + +DT+
Sbjct: 28 HSALLLVFFL-LAAGVMHSDAGTSCPVLCTCR----NQVVDCSNQRLFSVPPDLPMDTRN 82
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L+ N I + +L + ++ L LR L + F + LDLS N LS
Sbjct: 83 LSLAHNRIAAVPPG-YLTCYM-ELRVLDLRNNSLMELPPGLFLHAKRLAHLDLSYNNLSH 140
Query: 119 VPSLIYIPY--LKSINLAHNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
VP+ ++ L I+L+HNP + ++ +FQ +R +D+S + + EA G+
Sbjct: 141 VPADMFREAHGLVHIDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLSLEALEGLPG 200
Query: 176 IDTLKLNGN 184
+ TL++ GN
Sbjct: 201 LVTLQIGGN 209
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 178 (67.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 48/171 (28%), Positives = 86/171 (50%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A+CP C+C +G TV+C +P+ I T+ L+L+ NNI + K F G+
Sbjct: 39 AACPPLCAC---SGT-TVDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDF--SGLK 92
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPI 138
++ L L + ++ V+ AF + ++ L L+ N L T+P L++ L ++L+ N I
Sbjct: 93 QLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFI 152
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ ++ + + QI I AF + ++ L LN N + S+
Sbjct: 153 QAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSI 203
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 31/102 (30%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +T+PE + Q L DLS N I + ++ F G T+++ L L K ++ ++
Sbjct: 123 LNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAF--RGATDLKNLQLDKNQISCIE 180
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
D AFR + ++ L L++N ++++P S ++P L++ L N
Sbjct: 181 DGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSN 222
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGITN 81
CP C C+ AG VEC + IPE I T L L++N I++L+ IF ++ +
Sbjct: 526 CPPKCRCE--AG--VVECSNLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKL--PH 579
Query: 82 IQKLYLRKCKLEFVDDRAFRGV--TNMDELDLSDNLLSTVPSLIYIPYLKSIN-LAHNPI 138
++K+ L K+ ++ G TN+ L S ++ L+ + L +N I
Sbjct: 580 LKKINLSNNKVSEIEGIHHAGAIGTNVGPLWGHPLPASRAGAVFCWAQLQPLGMLRNNRI 639
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + QI TI AF + + TL L N
Sbjct: 640 SCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLAN 685
>UNIPROTKB|H3BQ49 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] InterPro:IPR003591
SMART:SM00369 GO:GO:0043491 GO:GO:0031175 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715 HGNC:HGNC:21205
EMBL:AC046168 EMBL:AC105133 EMBL:AC110607 Ensembl:ENST00000561686
Bgee:H3BQ49 Uniprot:H3BQ49
Length = 179
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 11 LLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
LL +L SV S CP C C A R V C + F +PEGI +T++LDL N I
Sbjct: 21 LLLVLGSVLSGSATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK 78
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
L ++ F ++++L L + + V+ AF + N+ L L N L +P ++ +
Sbjct: 79 TLNQDEFASF--PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
L ++++ N I + Y FQ ++ +++ +
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGD 170
>UNIPROTKB|Q6UXK2 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0009986 "cell surface"
evidence=ISS] [GO:0045773 "positive regulation of axon extension"
evidence=ISS] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045773 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 EMBL:AB040898 EMBL:AY358316 EMBL:AK290467
IPI:IPI00479654 RefSeq:NP_001123608.1 RefSeq:NP_001123609.1
RefSeq:NP_001123610.1 RefSeq:NP_065902.1 UniGene:Hs.254775
ProteinModelPortal:Q6UXK2 SMR:Q6UXK2 IntAct:Q6UXK2 STRING:Q6UXK2
PhosphoSite:Q6UXK2 DMDM:74758577 PaxDb:Q6UXK2 PRIDE:Q6UXK2
Ensembl:ENST00000361742 Ensembl:ENST00000419208
Ensembl:ENST00000435464 Ensembl:ENST00000445793
Ensembl:ENST00000453268 Ensembl:ENST00000565159
Ensembl:ENST00000565540 GeneID:57611 KEGG:hsa:57611 UCSC:uc002axd.3
CTD:57611 GeneCards:GC15P074421 HGNC:HGNC:29286 MIM:614179
neXtProt:NX_Q6UXK2 PharmGKB:PA143485505 eggNOG:NOG240332
HOGENOM:HOG000113108 HOVERGEN:HBG100863 InParanoid:Q6UXK2
OMA:PRASYLE OrthoDB:EOG4QC14W GenomeRNAi:57611 NextBio:64263
ArrayExpress:Q6UXK2 Bgee:Q6UXK2 CleanEx:HS_ISLR2
Genevestigator:Q6UXK2 Uniprot:Q6UXK2
Length = 745
Score = 177 (67.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 45/179 (25%), Positives = 88/179 (49%)
Query: 8 SVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
+++L+ L V SCP C+C K + +C + +PEG+ + L LS+N I
Sbjct: 6 ALWLVWALLGVA-GSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKIT 64
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYI 125
VL++ F +T + L+L ++ V+ A ++ + LDLS N +S+ P L +
Sbjct: 65 VLRRGAFAD--VTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNL 122
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
L+ + + HN + + + + P +R + ++N ++ T+ F + + L+L N
Sbjct: 123 SALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 174 (66.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/196 (29%), Positives = 91/196 (46%)
Query: 6 ILSVFLLTL---LASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
+LSVFLL A + SCP C C + C + +P+ + T +LDLS
Sbjct: 14 LLSVFLLLFEVARAGRSVVSCPANCLC----ASNILSCSKQQLPNVPQSLPSYTALLDLS 69
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL 122
NN++ L+ E + +TN+ L L L F+ AF V N+ LDLS N L T+
Sbjct: 70 HNNLSRLRAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEF 128
Query: 123 IY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG---IDKID 177
++ + L+ + L +N I + +F+ ++ + +S QI E + K+
Sbjct: 129 LFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM 188
Query: 178 TLKLNGNKLASLKPRT 193
L L+ NKL L P T
Sbjct: 189 LLDLSSNKLKKL-PLT 203
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 54/183 (29%), Positives = 93/183 (50%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+FLL LL + +SCP C C + R V C R TIP G+ LDT++LDLS N +
Sbjct: 18 LFLL-LLPGGSISSCPTVCDCTSQT--RAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWG 74
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IP 126
LQ+ + ++G +Q+L L +L ++ AF G+ ++ L L N L V I+ +
Sbjct: 75 LQRGMLSRLG--QLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLT 132
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L ++L N I +F ++ +++ + + + AF G+ K+ T+ L L
Sbjct: 133 ALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNL 192
Query: 187 ASL 189
+++
Sbjct: 193 STV 195
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPI 138
N+ L + +C L V +A ++ + LDLS N +S +P+ P L+ + L+ +
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
I++++F +D+++ + T+ AF DK+ TL+L+GN L
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 180 (68.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C G TV+C IP+ I T+ L+L+ NNI + K F+ G+
Sbjct: 33 ACPALCTC---TGA-TVDCHGAGLQAIPKNIPRSTERLELNGNNITRIHKNDFV--GLKQ 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPIH 139
++ L L + ++ V+ AF + ++ L L+ N L T+P L++ L ++L+ N I
Sbjct: 87 LRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQ 146
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 147 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 175 (66.7 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 51/169 (30%), Positives = 86/169 (50%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQM 77
+ A CP C C+ EC IPE I T L L++N I++L+ IF ++
Sbjct: 509 SDAVCPHKCRCE----ASLAECSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKL 564
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
T+++K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +
Sbjct: 565 --THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRN 622
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
N I I + SF +R + + + QI TI AF + + TL L N
Sbjct: 623 NRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 671
Score = 123 (48.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 31/102 (30%), Positives = 60/102 (58%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +T+PE + + Q L DLS N I + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 173 (66.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 10 FLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
FLL L SCP C C + A TV C NF ++PEGI ++ + L +N I+ L
Sbjct: 10 FLLVLCGLELSWSCPRHCIC-YMAPS-TVSCQAHNFLSVPEGIPPHSERIFLQNNKIHRL 67
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-IP 126
+ F +T L++ + +++ F+G T ++ELDL DN L S + +
Sbjct: 68 LQGHFSPTTVT----LWIYSNNITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLG 123
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L +++L + + + FQ ++Y+ + + + + + F + + L L+GN+L
Sbjct: 124 RLHALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRL 183
Query: 187 ASLKPRTW 194
SL T+
Sbjct: 184 WSLHQNTF 191
>MGI|MGI:2443855 [details] [associations]
symbol:Tsku "tsukushi" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=IMP] [GO:0021670 "lateral ventricle development"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IDA] [GO:0043010 "camera-type eye
development" evidence=IMP] [GO:0061073 "ciliary body morphogenesis"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443855 GO:GO:0005576 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 GO:GO:0021670
GO:GO:0021960 GO:GO:0021540 CTD:25987 HOGENOM:HOG000001578
HOVERGEN:HBG054643 KO:K08130 OrthoDB:EOG4V171F OMA:LTRVDCS
EMBL:AB214184 EMBL:AK035461 EMBL:AK137208 IPI:IPI00228404
RefSeq:NP_001019790.1 RefSeq:NP_001162011.1 RefSeq:NP_001162012.1
RefSeq:NP_001162013.1 UniGene:Mm.25317 ProteinModelPortal:Q8CBR6
SMR:Q8CBR6 PRIDE:Q8CBR6 Ensembl:ENSMUST00000094161
Ensembl:ENSMUST00000164726 Ensembl:ENSMUST00000165257
Ensembl:ENSMUST00000165901 Ensembl:ENSMUST00000167405
Ensembl:ENSMUST00000179780 GeneID:244152 KEGG:mmu:244152
GeneTree:ENSGT00390000016740 InParanoid:Q8CBR6 NextBio:386135
Bgee:Q8CBR6 CleanEx:MM_TSKU Genevestigator:Q8CBR6
GermOnline:ENSMUSG00000049580 Uniprot:Q8CBR6
Length = 354
Score = 170 (64.9 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 6 ILSVFLLTLLASVTQASCPL--GCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDT 56
+ S+FLL L Q + P GC C+ + V+C + +P I LDT
Sbjct: 2 LCSLFLLLLAVGRVQTTRPCFPGCQCEEETFGLFDSFSLIRVDCSSLGPHIVPVPIPLDT 61
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
LDLSSN + + + + G T + L L L + AF + ++ LDLS N L
Sbjct: 62 AHLDLSSNRLETVNESVLAGPGYTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGL 121
Query: 117 STVPSLIYIPY-LKSINLAHNPIHQ--ISSYSFQSTPGIRYIDMSNCQIHTIY---SEAF 170
+ +P+ I+ L INL+HN + + IS+++ S ++D+S+ IH + + A
Sbjct: 122 AALPAEIFTSSPLSDINLSHNRLREVSISAFTTHSQGRALHVDLSHNLIHRLLPHPARAS 181
Query: 171 YGIDKIDTLKLNGNKLASL 189
I +L L+ N+ ++
Sbjct: 182 LPAPTIQSLNLSWNRFRAV 200
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 177 (67.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 53/191 (27%), Positives = 88/191 (46%)
Query: 6 ILSVFLLTLLASVTQAS-----CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+L F L LL S + C CSC G R V+C + +PEG+ TQ LD
Sbjct: 7 LLCFFALGLLGSAGPSGAAPPLCAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALD 63
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
+S NNI L ++ F +++L L L F+ +A G+ + L L +N L TVP
Sbjct: 64 ISMNNITQLPEDAFKNFPF--LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVP 121
Query: 121 S--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
S + + L+S+ L N I + SF+ +R++ + + + + + +
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQA 181
Query: 179 LKLNGNKLASL 189
L L N ++S+
Sbjct: 182 LTLALNNISSI 192
Score = 156 (60.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 39/134 (29%), Positives = 70/134 (52%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 106 ELKVLTLQNNQLKTVPSEAI--RGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
+L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 164 ILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 224 LDNLETLDLNYNNL 237
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/136 (26%), Positives = 65/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ NNI+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 180 QALTLALNNISSIPDFAFTNL--SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL 237
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G L P
Sbjct: 298 LHSLVIRGASLVQWFP 313
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + D + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I I +FQ +R +D+S I I+S AF + I L ++ N+L S
Sbjct: 377 ISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 174 (66.3 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 45/185 (24%), Positives = 87/185 (47%)
Query: 8 SVFLLTLL-ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
+V LL L S CP CSC V C R+ +PEG+ + + LDLS N +
Sbjct: 13 TVLLLWCLNLSAADLPCPQRCSCS--RDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQL 70
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY-- 124
L + F ++ ++ L L + + ++ F+G+ N+ L + +N L +P ++
Sbjct: 71 KTLARRQF--SSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSG 128
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L+ ++++ N I Y+F+ ++ +D + I AF G+ + L ++ +
Sbjct: 129 LSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRS 188
Query: 185 KLASL 189
L S+
Sbjct: 189 NLTSI 193
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 41/176 (23%), Positives = 81/176 (46%)
Query: 15 LASV-TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEI 73
L S+ T+A L K + K T+ + N + + Q+L SS + +L
Sbjct: 190 LTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRT-LQILHWSS--LEMLNSNS 246
Query: 74 FLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSI 131
+ + +T L L C L + R + + LDLS N ++++ + + L+ +
Sbjct: 247 LVGLNLTT---LVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQEL 303
Query: 132 NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+L + QI +F+ R +++S+ ++ T+ AF+ + + TL+L+ N LA
Sbjct: 304 HLVGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLA 359
>UNIPROTKB|F1N7G4 [details] [associations]
symbol:ISLR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 CTD:57611 OMA:PRASYLE
GeneTree:ENSGT00700000104028 EMBL:DAAA02052518 IPI:IPI01001322
RefSeq:XP_002696730.1 UniGene:Bt.86635 Ensembl:ENSBTAT00000003445
GeneID:617436 KEGG:bta:617436 NextBio:20900664 Uniprot:F1N7G4
Length = 750
Score = 175 (66.7 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 44/173 (25%), Positives = 86/173 (49%)
Query: 14 LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEI 73
LL + T +CP C+C K + +C + +PEG+ + L LS+N I VL++
Sbjct: 13 LLGAAT--ACPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGA 70
Query: 74 FLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSI 131
F +T + L+L ++ V+ + ++ + LDLS NL+S+ P L + L+ +
Sbjct: 71 FAD--VTQVTSLWLAHNEVRTVEPGSLAVLSQLKNLDLSHNLISSFPWSDLRNLSALQLL 128
Query: 132 NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ HN + + + + P +R + ++N ++ T+ F + + L+L N
Sbjct: 129 KMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 31/116 (26%), Positives = 62/116 (53%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-P-SLIYIPYLKSINLAHNPI 138
N+ L L K+ + AF VT + L L+ N + TV P SL + LK+++L+HN I
Sbjct: 52 NVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGSLAVLSQLKNLDLSHNLI 111
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
++ ++ + M++ ++ ++ +A + + +L++N N+L +L P T+
Sbjct: 112 SSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTF 167
>RGD|727812 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA;ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA;ISO;ISS;IDA] InterPro:IPR001611
PROSITE:PS51450 RGD:727812 GO:GO:0016021 GO:GO:0009897
InterPro:IPR003591 SMART:SM00369 GO:GO:0004872 GO:GO:0045121
GO:GO:0007166 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OrthoDB:EOG4FXR7G eggNOG:NOG254142
EMBL:AF532861 EMBL:AY311478 EMBL:BC129084 IPI:IPI00327090
IPI:IPI00734618 RefSeq:NP_852042.1 UniGene:Rn.22361
ProteinModelPortal:Q80WD0 Ensembl:ENSRNOT00000067414 GeneID:303311
KEGG:rno:303311 InParanoid:Q80WD0 NextBio:651118
ArrayExpress:Q80WD0 Genevestigator:Q80WD0
GermOnline:ENSRNOG00000003121 Uniprot:Q80WD0
Length = 445
Score = 171 (65.3 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 11 LLTLLASVTQAS--CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LL LLA S CP C C TV C NF IPEGI D++ + L +N+I
Sbjct: 11 LLLLLAGELPLSGGCPRDCVCY--PSPMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITF 68
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
LQ+ F +T L++ + F+ F G +++ELDL DN L + P +
Sbjct: 69 LQQGHFSPAMVT----LWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGL 124
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++ L + + + F ++Y+ + + I + + F + + L L+GNK
Sbjct: 125 VKLHALYLYKCGLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNK 184
Query: 186 LASL 189
L SL
Sbjct: 185 LWSL 188
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 50 EGIDLDTQVLDLSSNN-INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDE 108
EG + + LDL N + L E F G+ + LYL KC L + F G+ ++
Sbjct: 97 EGF-VHLEELDLGDNRQLRTLAPETF--QGLVKLHALYLYKCGLSSLPAGIFGGLHSLQY 153
Query: 109 LDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYS-----FQSTPGIRYIDMSNCQIH 163
L L DN + + I++ +NL+H +H +S F+ + + + Q+
Sbjct: 154 LYLQDNHIEYLQDDIFVDL---VNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQ 210
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLK 190
++ +AF+ + ++ TL L N L L+
Sbjct: 211 WVHHKAFHDLHRLTTLFLFNNSLTELQ 237
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 172 (65.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL LL + A CP C C + A TVEC +P GI TQ L L NNI L+
Sbjct: 11 LLLLLLPLRAAGCPAACRC-YSA---TVECGALRLRVVPLGIPPGTQTLFLQDNNIARLE 66
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYL 128
+ +++LYL L ++ AFR + EL L+ N L + S + + L
Sbjct: 67 PGALAPLAA--LRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQL 124
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
+ + LA N + ++ ++F P ++ + + I + +A G+ + L L+ N+L +
Sbjct: 125 RVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGT 184
Query: 189 L 189
+
Sbjct: 185 I 185
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 173 (66.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 42/138 (30%), Positives = 78/138 (56%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL +F G+ N+ +L L KL ++ F G+ + ELDLS N L +
Sbjct: 174 LNLGWNSLVVLPDTVF--QGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS 231
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + +++P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 232 VKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGL 291
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N +ASL+PRT+
Sbjct: 292 HVLRLAHNAIASLRPRTF 309
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP+ C+C + +V C +N +P+ I + T+ L L NN++ + F ++
Sbjct: 40 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAF--QNLS 97
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST--VPSLIYIPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L N L V + P L S++L+ N +
Sbjct: 98 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 157
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ FQ + +++ + + F G+ + L L GNKL L+P
Sbjct: 158 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 210
Score = 139 (54.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 39/142 (27%), Positives = 73/142 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS- 117
LDLS N + ++ +F+ + +QKLYL + + V RAF G+ + LDLS N ++
Sbjct: 222 LDLSRNALRSVKANVFVHL--PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG 279
Query: 118 ----TVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
T P L+ + L+ LAHN I + +F+ + + + + +I + F G+
Sbjct: 280 LMEDTFPGLLGLHVLR---LAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGL 336
Query: 174 DKIDTLKLNGNKLASLKPRTWS 195
+++ L LN N++ ++ +S
Sbjct: 337 GQLEVLTLNDNQITEVRVGAFS 358
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L LSSN + L++ +F G++++ L L L + D F+G+ N+ EL L+ N L+
Sbjct: 150 LSLSSNLLGRLEEGLF--QGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY 207
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P+L + L+ ++L+ N + + + F P ++ + + I + AF G+ +
Sbjct: 208 LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKAL 267
Query: 177 DTLKLNGNKLASLKPRTW 194
L L+ N++A L T+
Sbjct: 268 RWLDLSHNRVAGLMEDTF 285
Score = 122 (48.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L ++ V AF G+ N+ ++LS N L +
Sbjct: 318 LQLGHNRIRQLGERTF--EGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRS 375
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + + ++F G+R + + + I +I ++ G+ ++
Sbjct: 376 LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSEL 435
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L PR
Sbjct: 436 LELDLTTNRLTHL-PR 450
Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 25/117 (21%), Positives = 65/117 (55%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+LR + +++++ G++ + ELDL+ N L+ +P ++ + +L+ + L++
Sbjct: 407 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 466
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + +S+ ++D+S+ + T+ F + ++ L L N L + P+
Sbjct: 467 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQ 523
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 45/195 (23%), Positives = 87/195 (44%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRN-FYTIPEGIDLDTQVLDL 61
H+ +L+ LT L C LG + + + + N F +P Q L L
Sbjct: 196 HELVLAGNKLTYLQPAL--FCGLGELRELDLSRNALRSVKANVFVHLPR-----LQKLYL 248
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
N I + FL G+ ++ L L ++ + + F G+ + L L+ N ++++
Sbjct: 249 DRNLITAVAPRAFL--GMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRP 306
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
+ + +L+ + L HN I Q+ +F+ + + +++ QI + AF G+ + +
Sbjct: 307 RTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVM 366
Query: 180 KLNGNKLASLKPRTW 194
L+GN L SL R +
Sbjct: 367 NLSGNCLRSLPERVF 381
>UNIPROTKB|A4IFA6 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9913 "Bos taurus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W
GeneTree:ENSGT00700000104028 EMBL:BC134481 IPI:IPI00685291
RefSeq:NP_001074198.1 UniGene:Bt.1899 ProteinModelPortal:A4IFA6
PRIDE:A4IFA6 Ensembl:ENSBTAT00000007913 GeneID:515018
KEGG:bta:515018 CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853
InParanoid:A4IFA6 OMA:HGKAVEG NextBio:20871625 Uniprot:A4IFA6
Length = 428
Score = 170 (64.9 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 46/180 (25%), Positives = 84/180 (46%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L + L +L + QA CP C C K G +C R+ +P G + L LS+N +
Sbjct: 4 LRLLCLVVLVGLAQA-CPEPCECGEKYGFHIADCAYRDLQAVPSGFPANVTTLSLSANQL 62
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIY 124
L F + + +Q L+L ++ V A ++ + LDLS NL+S L
Sbjct: 63 PSLPGGAFRE--VPRLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLISDFAWSDLHS 120
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L+ + + N + I +F+S +R + +++ ++HT+ F + + L++N N
Sbjct: 121 LSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFAPLTALSHLQINDN 180
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 172 (65.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 42/138 (30%), Positives = 78/138 (56%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL +F G+ N+ +L L KL ++ F G+ + ELDLS N L +
Sbjct: 175 LNLGWNSLVVLPDTVF--QGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS 232
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + +++P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 VKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N +ASL+PRT+
Sbjct: 293 HVLRLAHNAIASLRPRTF 310
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP+ C+C + +V C +N +P+ I + T+ L L NN++ + F ++
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAF--QNLS 98
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST--VPSLIYIPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L N L V + P L S++L+ N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 158
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ FQ + +++ + + F G+ + L L GNKL L+P
Sbjct: 159 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 211
Score = 132 (51.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/142 (26%), Positives = 72/142 (50%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS- 117
LDLS N + ++ +F+ + +QKLYL + + V AF G+ + LDLS N ++
Sbjct: 223 LDLSRNALRSVKANVFVHL--PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAG 280
Query: 118 ----TVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
T P L+ + L+ LAHN I + +F+ + + + + +I + F G+
Sbjct: 281 LMEDTFPGLLGLHVLR---LAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGL 337
Query: 174 DKIDTLKLNGNKLASLKPRTWS 195
+++ L LN N++ ++ +S
Sbjct: 338 GQLEVLTLNDNQITEVRVGAFS 359
Score = 122 (48.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L ++ V AF G+ N+ ++LS N L +
Sbjct: 319 LQLGHNRIRQLGERTF--EGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRS 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + + ++F G+R + + + I +I ++ G+ ++
Sbjct: 377 LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L PR
Sbjct: 437 LELDLTTNRLTHL-PR 451
Score = 122 (48.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L LSSN + L++ +F G++++ L L L + D F+G+ N+ EL L+ N L+
Sbjct: 151 LSLSSNLLGRLEEGLF--QGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY 208
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P+L + L+ ++L+ N + + + F P ++ + + I + AF G+ +
Sbjct: 209 LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKAL 268
Query: 177 DTLKLNGNKLASLKPRTW 194
L L+ N++A L T+
Sbjct: 269 RWLDLSHNRVAGLMEDTF 286
Score = 121 (47.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 25/117 (21%), Positives = 65/117 (55%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAH 135
G++ +++L+LR + +++++ G++ + ELDL+ N L+ +P ++ + +L+ + L++
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 467
Query: 136 NPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPR 192
N + +S+ ++D+S+ + T+ F + ++ L L N L + P+
Sbjct: 468 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ 524
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 45/195 (23%), Positives = 87/195 (44%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRN-FYTIPEGIDLDTQVLDL 61
H+ +L+ LT L C LG + + + + N F +P Q L L
Sbjct: 197 HELVLAGNKLTYLQPAL--FCGLGELRELDLSRNALRSVKANVFVHLPR-----LQKLYL 249
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
N I + FL G+ ++ L L ++ + + F G+ + L L+ N ++++
Sbjct: 250 DRNLITAVAPGAFL--GMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRP 307
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
+ + +L+ + L HN I Q+ +F+ + + +++ QI + AF G+ + +
Sbjct: 308 RTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVM 367
Query: 180 KLNGNKLASLKPRTW 194
L+GN L SL R +
Sbjct: 368 NLSGNCLRSLPERVF 382
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 172 (65.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 49/185 (26%), Positives = 91/185 (49%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
LS+ L L A CP C C R+V C R +PEGI ++T+ LDLS N +
Sbjct: 12 LSLLPLHLFQCPAHA-CPARCECS--VPTRSVSCHRRRLAQVPEGIPIETRSLDLSKNRL 68
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIY 124
++ + F + + +++L L L V+ +FR + L L N L+ +P +L
Sbjct: 69 RIVTPQNFSSLLL--LEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAG 126
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L ++++ N + + Y F+ +R +++S+ ++ I AF G+ + +L L
Sbjct: 127 LSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRC 186
Query: 185 KLASL 189
L+++
Sbjct: 187 NLSTV 191
>MGI|MGI:88158 [details] [associations]
symbol:Bgn "biglycan" species:10090 "Mus musculus" [GO:0005539
"glycosaminoglycan binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISS] [GO:0019800
"peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0050840 "extracellular
matrix binding" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:88158 GO:GO:0009986 GO:GO:0005578 eggNOG:COG4886
GO:GO:0042383 GO:GO:0001974 GO:GO:0031012 GO:GO:0030133
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 GO:GO:0044424 CTD:633
KO:K08118 OrthoDB:EOG4868CN ChiTaRS:BGN EMBL:X53928 EMBL:L20276
EMBL:BC005452 EMBL:BC019502 EMBL:Y11758 IPI:IPI00123194 PIR:S20811
RefSeq:NP_031568.2 UniGene:Mm.2608 ProteinModelPortal:P28653
SMR:P28653 IntAct:P28653 STRING:P28653 PhosphoSite:P28653
PaxDb:P28653 PRIDE:P28653 Ensembl:ENSMUST00000033741
Ensembl:ENSMUST00000169489 GeneID:12111 KEGG:mmu:12111
InParanoid:P28653 NextBio:280425 Bgee:P28653 CleanEx:MM_BGN
Genevestigator:P28653 GermOnline:ENSMUSG00000031375 Uniprot:P28653
Length = 369
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 53/181 (29%), Positives = 89/181 (49%)
Query: 15 LASVT---QASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L SVT A CP GC C R V+C D T+P+ I DT +LDL +N+I+ L+K
Sbjct: 53 LDSVTPTFSAMCPFGCHCHL----RVVQCSDLGLKTVPKEISPDTTLLDLQNNDISELRK 108
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + ++AF + + +L +S N L +P +P L
Sbjct: 109 DDF--KGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVE 164
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 165 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 223
Query: 189 L 189
+
Sbjct: 224 I 224
>RGD|2207 [details] [associations]
symbol:Bgn "biglycan" species:10116 "Rattus norvegicus" [GO:0001974
"blood vessel remodeling" evidence=IEP] [GO:0005539
"glycosaminoglycan binding" evidence=IEA;ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA;ISO] [GO:0030133 "transport
vesicle" evidence=IEA;ISO] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0042383 "sarcolemma" evidence=IEA;ISO] [GO:0050840
"extracellular matrix binding" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:2207 GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383
GO:GO:0001974 GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 GeneTree:ENSGT00700000104006
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 CTD:633 KO:K08118
OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:U17834 EMBL:BC072480
IPI:IPI00191090 PIR:PT0077 PIR:S32793 RefSeq:NP_058783.1
UniGene:Rn.783 ProteinModelPortal:P47853 SMR:P47853 IntAct:P47853
STRING:P47853 PRIDE:P47853 Ensembl:ENSRNOT00000023920 GeneID:25181
KEGG:rno:25181 InParanoid:P47853 NextBio:605671 Genevestigator:P47853
GermOnline:ENSRNOG00000017440 Uniprot:P47853
Length = 369
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 12 LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L L A CP GC C R V+C D T+P+ I DT +LDL +N+I+ L+K
Sbjct: 53 LDSLTPTFSAMCPFGCHCHL----RVVQCSDLGLKTVPKEISPDTTLLDLQNNDISELRK 108
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + ++AF + + +L +S N L +P +P L
Sbjct: 109 DDF--KGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVE 164
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 165 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 223
Query: 189 L 189
+
Sbjct: 224 I 224
>UNIPROTKB|Q3ZBN5 [details] [associations]
symbol:ASPN "Asporin" species:9913 "Bos taurus" [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0070171
"negative regulation of tooth mineralization" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030282 "bone
mineralization" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0030282 EMBL:BC103199 IPI:IPI00717119
RefSeq:NP_001029481.1 UniGene:Bt.45145 HSSP:P21809
ProteinModelPortal:Q3ZBN5 SMR:Q3ZBN5 STRING:Q3ZBN5
Ensembl:ENSBTAT00000035046 GeneID:507990 KEGG:bta:507990 CTD:54829
GeneTree:ENSGT00700000104006 HOGENOM:HOG000261690
HOVERGEN:HBG016052 InParanoid:Q3ZBN5 KO:K08120 OMA:LCSAKPL
OrthoDB:EOG4KWJT1 NextBio:20868302 GO:GO:0070171 GO:GO:0030512
InterPro:IPR016352 PIRSF:PIRSF002490 Uniprot:Q3ZBN5
Length = 370
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 47/172 (27%), Positives = 83/172 (48%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
++CP GC C R V C D ++P I DT+++DL +N I +++ F G+T
Sbjct: 63 STCPFGCQCY----SRVVHCSDLGLSSVPSNIPFDTRMVDLQNNKIKEIKENDF--KGLT 116
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIH 139
++ L L KL + +AF + L LS N LS +P + +P L + + N +
Sbjct: 117 SLYALILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIP--LNLPKSLAELRIHDNKVK 174
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
+I +F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 175 KIQKATFKGMNALHVLEMSANPLDNNGIEPGAFEGVT-VFHIRIAEAKLTSI 225
>UNIPROTKB|F1SUE4 [details] [associations]
symbol:ASPN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070171 "negative regulation of tooth mineralization"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 GO:GO:0005509 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030282
GeneTree:ENSGT00700000104006 OMA:LCSAKPL GO:GO:0070171
GO:GO:0030512 InterPro:IPR016352 PIRSF:PIRSF002490 EMBL:CU855543
EMBL:FP312776 Ensembl:ENSSSCT00000008845 ArrayExpress:F1SUE4
Uniprot:F1SUE4
Length = 370
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 47/171 (27%), Positives = 82/171 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C R V C D ++P I DT+++DL +N I +++ F G+T+
Sbjct: 64 TCPFGCQCY----SRVVHCSDLGLSSVPSNIPFDTRMVDLQNNKIKEIKENDF--KGLTS 117
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L L KL + +AF + L LS N LS +P + +P L + + N + +
Sbjct: 118 LYALILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIP--LNLPKSLAELRIHENKVKK 175
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 176 IQKETFKGMNALHVLEMSANPLDNNGIEPGAFEGVT-VFHIRIAEAKLTSI 225
>UNIPROTKB|E2RBW8 [details] [associations]
symbol:ASPN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070171 "negative regulation of tooth
mineralization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 GO:GO:0005509 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030282 CTD:54829
GeneTree:ENSGT00700000104006 KO:K08120 OMA:LCSAKPL GO:GO:0070171
GO:GO:0030512 InterPro:IPR016352 PIRSF:PIRSF002490
EMBL:AAEX03000683 RefSeq:XP_853321.1 ProteinModelPortal:E2RBW8
Ensembl:ENSCAFT00000037590 GeneID:610685 KEGG:cfa:610685
NextBio:20896236 Uniprot:E2RBW8
Length = 372
Score = 168 (64.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C R V C D ++P I DTQ++DL +N I +++ F G+T+
Sbjct: 66 TCPFGCQCY----SRVVHCSDLGLSSVPSNIPFDTQMIDLQNNKIKEIKENDF--KGLTS 119
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L L KL + +AF + L LS N LS +P +P L + + N + +
Sbjct: 120 LYALILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIP--FNLPKSLAELRIHDNKVKK 177
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 178 IQKETFKGMNTLHVLEMSANPLDNNGIEPGAFEGVT-VFHIRIAEAKLTSI 227
>UNIPROTKB|Q6PEZ8 [details] [associations]
symbol:PODNL1 "Podocan-like protein 1" species:9606 "Homo
sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 InterPro:IPR003591 SMART:SM00369 EMBL:CH471106
InterPro:IPR000372 SMART:SM00013 HSSP:P07359 EMBL:AC020916
HOVERGEN:HBG059195 OrthoDB:EOG42V8FX HOGENOM:HOG000231119
EMBL:AK027100 EMBL:AK298489 EMBL:BC057786 IPI:IPI00302227
IPI:IPI00412448 RefSeq:NP_001139726.1 RefSeq:NP_001139727.1
RefSeq:NP_079101.3 UniGene:Hs.448497 ProteinModelPortal:Q6PEZ8
SMR:Q6PEZ8 PhosphoSite:Q6PEZ8 DMDM:296452863 PaxDb:Q6PEZ8
PRIDE:Q6PEZ8 Ensembl:ENST00000339560 Ensembl:ENST00000538371
Ensembl:ENST00000538517 GeneID:79883 KEGG:hsa:79883 UCSC:uc002mxr.3
CTD:79883 GeneCards:GC19M014044 HGNC:HGNC:26275 HPA:HPA042807
neXtProt:NX_Q6PEZ8 PharmGKB:PA162399855 eggNOG:NOG305076
InParanoid:Q6PEZ8 OMA:HVGPEAF PhylomeDB:Q6PEZ8 GenomeRNAi:79883
NextBio:69683 ArrayExpress:Q6PEZ8 Bgee:Q6PEZ8 CleanEx:HS_PODNL1
Genevestigator:Q6PEZ8 Uniprot:Q6PEZ8
Length = 512
Score = 170 (64.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 51/174 (29%), Positives = 83/174 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ-KEIFLQMGIT 80
+CPL CSC TV+C + P+ I Q L L +N + L E+ G+
Sbjct: 45 ACPLRCSCP---RVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYNELSRLSGLR 101
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIH 139
+ L+ E + D AF +T + L ++ N LS P ++P L+ +LA N +
Sbjct: 102 TLN-LHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVAPQ--FLPRSLRVADLAANQVM 158
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASLKP 191
+I +F P +R + + N Q+ + +AF G + I TL L+ N+L+ L P
Sbjct: 159 EIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPP 212
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 48 IPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKL--EFVDDRAFRGVTN 105
+P + + L L +N I+ + + + T +++LYL+ +L +D F + +
Sbjct: 210 LPPSLPPSLERLHLQNNLISKVPRGALSRQ--TQLRELYLQHNQLTDSGLDATTFSKLHS 267
Query: 106 MDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHT 164
++ LDLS N L+TVP+ +P L ++L N I Q+ + G+RY+ + + Q+ +
Sbjct: 268 LEYLDLSHNQLTTVPA--GLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGS 325
Query: 165 --IYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + A + + TL L GN L + P
Sbjct: 326 SGLPAGALRPLRGLHTLHLYGNGLDRVPP 354
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 176 (67.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ VEC IPE I T L L++N I++L+ + +T++
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK-LTHL 567
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +N I
Sbjct: 568 KKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + QI T+ AF + + TL L N
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
++CP C+C G TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 32 SACPALCTC---TGT-TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLK 85
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPI 138
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 115 (45.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/102 (29%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN + +PE + + Q L DLS N I + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 176 (67.0 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ VEC IPE I T L L++N I++L+ + +T++
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK-LTHL 567
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +N I
Sbjct: 568 KKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + QI T+ AF + + TL L N
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
++CP C+C G TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 32 SACPALCTC---TGT-TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLK 85
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPI 138
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/102 (29%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN + +PE + + Q L DLS N I + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 174 (66.3 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP CSC G R V+C R +P G+ TQ LD+S NNI L ++ F +
Sbjct: 112 CPASCSCD---GDRGVDCSGRGLAAVPPGLSAFTQALDVSMNNITRLPEDAF--KNFPYL 166
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQ 140
++L L L F+ +A G+ + L L +N L TVP+ + + L+S+ L N I
Sbjct: 167 EELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITA 226
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + + + + L L NK+ +
Sbjct: 227 VPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHI 275
Score = 158 (60.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V +F G+ + L L DN
Sbjct: 189 ELKVLTLQNNQLKTVPNEAI--RGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDN 246
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I Y+F + + + + N +I TI F G
Sbjct: 247 SLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDG 306
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N +
Sbjct: 307 LDNLETLDLNYNNM 320
Score = 144 (55.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 37/112 (33%), Positives = 58/112 (51%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G N++ L L K+ + + + LDLS N + +PS L+ I+L HN
Sbjct: 400 GTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQHNQ 459
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
IH+I+ +FQ +R +D+S +I I+ EAF I I L L+ N+L S+
Sbjct: 460 IHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSV 511
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 170 (64.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 44/173 (25%), Positives = 87/173 (50%)
Query: 23 CPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP+ C+C + + +V C RN +P+GI + T+ L L NN++ + F ++
Sbjct: 41 CPVTCTCSYDDYTDELSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAF--QNLS 98
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++ L L+ L ++ +A G+ N+ L L NLL ++ + ++ P L S++L +N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLL 158
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
++ F+ + +++ + + F G+ + L L GNKL L+P
Sbjct: 159 GRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 211
Score = 164 (62.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL +F G+ N+ +L L KL ++ G+ + ELDLS N L +
Sbjct: 175 LNLGWNSLVVLPDTVF--QGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRS 232
Query: 119 VPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
V + I++P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 VKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L N + SL+PRT+
Sbjct: 293 HVLRLAHNAITSLRPRTF 310
Score = 142 (55.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN---- 114
LDLS N + ++ +F+ + +QKLYL + + V RAF G+ + LDLS N
Sbjct: 223 LDLSRNALRSVKANVFIHL--PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG 280
Query: 115 -LLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
L T P L+ + L+ LAHN I + +F+ + + + + +I + + F G+
Sbjct: 281 LLEDTFPGLLGLHVLR---LAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGL 337
Query: 174 DKIDTLKLNGNKLASLK 190
+++ L LN N++ +K
Sbjct: 338 GQLEVLTLNDNQIHEVK 354
Score = 127 (49.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 45/190 (23%), Positives = 87/190 (45%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRN-FYTIPEGIDLDTQVLDL 61
H+ +L+ LT L C LG + + + + N F +P Q L L
Sbjct: 197 HELVLAGNKLTYLQPALL--CGLGELRELDLSRNALRSVKANVFIHLPR-----LQKLYL 249
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
N I + FL G+ ++ L L ++ + + F G+ + L L+ N ++++
Sbjct: 250 DRNLITAVAPRAFL--GMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRP 307
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
+ + +L+ + L HN I Q+ +F+ + + +++ QIH + AF+G+ + +
Sbjct: 308 RTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVM 367
Query: 180 KLNGNKLASL 189
L+GN L SL
Sbjct: 368 NLSGNCLRSL 377
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L ++ F G+ ++ L L ++ V AF G+ N+ ++LS N L +
Sbjct: 319 LQLGHNRIRQLGEKTF--EGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRS 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L H+ + +I ++F G+R + + + I +I ++ G+ ++
Sbjct: 377 LPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L PR
Sbjct: 437 LELDLTANQLTHL-PR 451
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 170 (64.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/178 (25%), Positives = 89/178 (50%)
Query: 22 SCPLGCSCKWK--AGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGI 79
+CP C C + A + +V C RN +P+G+ TQ L L NN++ + F +
Sbjct: 40 ACPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAF--QNL 97
Query: 80 TNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNP 137
+++ L L+ +L ++ +A G+ N+ L L N L ++ + + P L S+ L++N
Sbjct: 98 SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNR 157
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ ++ F+ + +++ + + AF G+ + L L GN+LA L+P +S
Sbjct: 158 LSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFS 215
Score = 164 (62.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 39/138 (28%), Positives = 78/138 (56%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L N++ VL F G+ ++++L L +L ++ F G+ + ELDLS N L
Sbjct: 175 LNLGWNSLAVLPDAAF--RGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRA 232
Query: 119 VPSLIYI--PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + +++ P L+ + L N I ++ +F +R++D+S+ ++ + + F G+ +
Sbjct: 233 IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 177 DTLKLNGNKLASLKPRTW 194
L+L+ N +ASL+PRT+
Sbjct: 293 RVLRLSHNAIASLRPRTF 310
Score = 127 (49.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 38/162 (23%), Positives = 79/162 (48%)
Query: 41 IDRNFYT-IPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DRN + G L + L DLS N + L ++ F G+ ++ L L + +
Sbjct: 249 LDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTF--PGLLGLRVLRLSHNAIASLR 306
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
R F+ + ++EL L N + + + + L+ + L HN + ++ + +F +
Sbjct: 307 PRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAV 366
Query: 155 IDMS-NCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+++S NC + + + F G+ K+ +L L G+ L ++P T++
Sbjct: 367 MNLSGNC-LRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFT 407
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L + F G+ ++ L L +L+ V AF G+TN+ ++LS N L
Sbjct: 319 LQLGHNRIRQLAERSF--EGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRN 376
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P ++ + L S++L + + +I ++F G+R + + + + I ++ +G+ ++
Sbjct: 377 LPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAEL 436
Query: 177 DTLKLNGNKLASLKPR 192
L L N+L L R
Sbjct: 437 LELDLTSNQLTHLPHR 452
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 33/135 (24%), Positives = 67/135 (49%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L N I + FL G+ ++ L L ++ + + F G+ + L LS N +
Sbjct: 245 QKLYLDRNLIAAVAPGAFL--GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAI 302
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+++ + + +L+ + L HN I Q++ SF+ + + + + Q+ + + AF G+
Sbjct: 303 ASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLT 362
Query: 175 KIDTLKLNGNKLASL 189
+ + L+GN L +L
Sbjct: 363 NVAVMNLSGNCLRNL 377
>UNIPROTKB|Q9BXN1 [details] [associations]
symbol:ASPN "Asporin" species:9606 "Homo sapiens"
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0005509
"calcium ion binding" evidence=IDA] [GO:0030282 "bone
mineralization" evidence=IDA] [GO:0070171 "negative regulation of
tooth mineralization" evidence=ISS] [GO:0031012 "extracellular
matrix" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 eggNOG:COG4886 GO:GO:0005509 EMBL:CH471089
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030282
CTD:54829 HOVERGEN:HBG016052 KO:K08120 OMA:LCSAKPL
OrthoDB:EOG4KWJT1 GO:GO:0070171 GO:GO:0030512 InterPro:IPR016352
PIRSF:PIRSF002490 EMBL:AF316824 EMBL:AY029191 EMBL:AK000136
EMBL:AK027359 EMBL:AY358329 EMBL:AL137848 IPI:IPI00418431
RefSeq:NP_001180264.1 RefSeq:NP_060150.4 UniGene:Hs.435655
ProteinModelPortal:Q9BXN1 SMR:Q9BXN1 STRING:Q9BXN1
PhosphoSite:Q9BXN1 DMDM:209572589 PaxDb:Q9BXN1 PRIDE:Q9BXN1
Ensembl:ENST00000375544 GeneID:54829 KEGG:hsa:54829 UCSC:uc004ase.2
GeneCards:GC09M095218 HGNC:HGNC:14872 HPA:HPA008435 HPA:HPA024230
MIM:603932 MIM:607850 MIM:608135 neXtProt:NX_Q9BXN1
PharmGKB:PA25057 InParanoid:Q9BXN1 PhylomeDB:Q9BXN1
GenomeRNAi:54829 NextBio:57604 ArrayExpress:Q9BXN1 Bgee:Q9BXN1
CleanEx:HS_ASPN Genevestigator:Q9BXN1 GermOnline:ENSG00000106819
Uniprot:Q9BXN1
Length = 380
Score = 166 (63.5 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP GC C R V C D ++P I DT++LDL +N I +++ F G+T++
Sbjct: 75 CPFGCQCY----SRVVHCSDLGLTSVPTNIPFDTRMLDLQNNKIKEIKENDF--KGLTSL 128
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQI 141
L L KL + +AF + L LS N LS +P + +P L + + N + +I
Sbjct: 129 YGLILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIP--LNLPKSLAELRIHENKVKKI 186
Query: 142 SSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
+F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 187 QKDTFKGMNALHVLEMSANPLDNNGIEPGAFEGVT-VFHIRIAEAKLTSV 235
>MGI|MGI:2661375 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031103 "axon
regeneration" evidence=TAS] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046658
"anchored to plasma membrane" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2661375 GO:GO:0016021 GO:GO:0009897
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0045121 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GO:GO:0031103 EMBL:AL603905
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OMA:NCTSHRN OrthoDB:EOG4FXR7G
EMBL:AY250218 EMBL:AK033286 EMBL:AK140456 EMBL:BC030471
EMBL:BK001304 IPI:IPI00169628 RefSeq:NP_808376.1 UniGene:Mm.82661
ProteinModelPortal:Q8K0S5 SMR:Q8K0S5 STRING:Q8K0S5 PRIDE:Q8K0S5
Ensembl:ENSMUST00000102514 GeneID:237847 KEGG:mmu:237847
UCSC:uc007kdh.1 eggNOG:NOG254142 InParanoid:Q8K0S5 NextBio:383518
Bgee:Q8K0S5 CleanEx:MM_RTN4RL1 Genevestigator:Q8K0S5
GermOnline:ENSMUSG00000045287 Uniprot:Q8K0S5
Length = 445
Score = 167 (63.8 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 11 LLTLLASVTQ--ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LL LLA CP C C + A TV C NF IPEGI D++ + L +N I
Sbjct: 11 LLLLLAGELPLGGGCPRDCVC-YPA-PMTVSCQAHNFAAIPEGIPEDSERIFLQNNRITF 68
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
LQ+ F +T L++ + F+ F G +++ELDL DN L + P +
Sbjct: 69 LQQGHFSPAMVT----LWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGL 124
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L ++ L + + + F ++Y+ + + I + + F + + L L+GNK
Sbjct: 125 VKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNK 184
Query: 186 LASL 189
L SL
Sbjct: 185 LWSL 188
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 50 EGIDLDTQVLDLSSNN-INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDE 108
EG + + LDL N + L E F G+ + LYL KC L + F G+ ++
Sbjct: 97 EGF-VHLEELDLGDNRQLRTLAPETF--QGLVKLHALYLYKCGLSALPAGIFGGLHSLQY 153
Query: 109 LDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYS-----FQSTPGIRYIDMSNCQIH 163
L L DN + + I++ +NL+H +H +S F+ + + + Q+
Sbjct: 154 LYLQDNHIEYLQDDIFVDL---VNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQ 210
Query: 164 TIYSEAFYGIDKIDTLKLNGNKLASLK 190
++ +AF+ + ++ TL L N L L+
Sbjct: 211 WVHHKAFHDLHRLTTLFLFNNSLTELQ 237
>UNIPROTKB|A6H793 [details] [associations]
symbol:LRRC3 "Leucine-rich repeat-containing protein 3"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 EMBL:BC146159
IPI:IPI00854410 RefSeq:NP_001092354.1 UniGene:Bt.16596
ProteinModelPortal:A6H793 Ensembl:ENSBTAT00000023769 GeneID:506054
KEGG:bta:506054 CTD:81543 eggNOG:NOG318731 InParanoid:A6H793
OMA:HCECALQ OrthoDB:EOG48PMM1 NextBio:20867427 Uniprot:A6H793
Length = 257
Score = 160 (61.4 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 56/189 (29%), Positives = 79/189 (41%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL L ASCP C C AG V C R +P I DT +L L +N I +
Sbjct: 21 LLLLFCLRLGASCPQNCQCPDHAGAVAVHCSARGLQEVPRDIPADTVLLKLDANKIARIP 80
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTVPSLIYIPYLK 129
F + +++L L + +E + AF G+ + LDLS N L +P
Sbjct: 81 NGAFQHLH--QLRELDLSQNAIETIGPAAFSGLAGGLRLLDLSHNRLRRIPKDALGKLSA 138
Query: 130 SINLAHNPIH-----QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I LAHNP+H Q + + + P +D C HT E + G I L +G
Sbjct: 139 KIRLAHNPLHCECALQEALWELKLDPDS--VDEIAC--HTSVQEEYVGKPLIQALD-SGV 193
Query: 185 KLASLKPRT 193
S+ +T
Sbjct: 194 SFCSVHHKT 202
>UNIPROTKB|O14498 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W CTD:3671
HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG EMBL:AB003184
EMBL:AB024536 EMBL:AB024537 EMBL:AY358871 IPI:IPI00023648
RefSeq:NP_005536.1 RefSeq:NP_958934.1 UniGene:Hs.699822
UniGene:Hs.733168 ProteinModelPortal:O14498 SMR:O14498
STRING:O14498 PaxDb:O14498 PeptideAtlas:O14498 PRIDE:O14498
DNASU:3671 Ensembl:ENST00000249842 Ensembl:ENST00000395118
GeneID:3671 KEGG:hsa:3671 UCSC:uc002axg.1 GeneCards:GC15P074466
HGNC:HGNC:6133 HPA:HPA050811 MIM:602059 neXtProt:NX_O14498
PharmGKB:PA29933 InParanoid:O14498 PhylomeDB:O14498 ChiTaRS:ISLR
GenomeRNAi:3671 NextBio:14367 Bgee:O14498 CleanEx:HS_ISLR
Genevestigator:O14498 Uniprot:O14498
Length = 428
Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/173 (26%), Positives = 86/173 (49%)
Query: 14 LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEI 73
LL + QA CP C C K G + +C R+ ++P G + L LS+N + L +
Sbjct: 11 LLLGLAQA-CPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVTTLSLSANRLPGLPEGA 69
Query: 74 FLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSI 131
F ++ + +Q L+L ++ V A ++++ LDLS NL+S L + L+ +
Sbjct: 70 FREVPL--LQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQLL 127
Query: 132 NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ N + I +F+S +R + +++ ++HT+ F + + L++N N
Sbjct: 128 KMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQINEN 180
Score = 112 (44.5 bits), Expect = 0.00036, P = 0.00036
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPI 138
N+ L L +L + + AFR V + L L+ N + TV + L + +LKS++L+HN I
Sbjct: 51 NVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLI 110
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ + ++ + M + ++ I +AF + + +L+LN N+L +L T++
Sbjct: 111 SDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFT 167
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 173 (66.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/164 (29%), Positives = 83/164 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ VEC IPE I T L L++N I++L+ + +T++
Sbjct: 376 CPHKCRCE----ASVVECSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKK-LTHL 430
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +N I
Sbjct: 431 KKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 490
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + QI TI AF + + TL L N
Sbjct: 491 IHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 110 (43.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
DLS N I + ++ F G T+++ L L K ++ +++ AFR + ++ L L++N +ST+
Sbjct: 3 DLSENTIQAIPRKAF--RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTI 60
Query: 120 P--SLIYIPYLKSINLAHN 136
P S ++P L++ L N
Sbjct: 61 PVSSFNHMPKLRTFRLHSN 79
Score = 58 (25.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 642 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 688
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 171 (65.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
C CSC G R V+C + +PEG+ TQ LD+S NNI L ++ F +
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPF--L 83
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS-LIY-IPYLKSINLAHNPIHQ 140
++L L L + +A G+ + L L +N L TVPS I+ + L+S+ L N I
Sbjct: 84 EELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITS 143
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + + + + L L N ++S+
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSI 192
Score = 149 (57.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 106 ELKVLTLQNNQLRTVPSEAI--HGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 164 SLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 224 LDNLETLDLNYNYL 237
Score = 130 (50.8 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ NNI+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 180 QALTLALNNISSIPDFAFTNL--SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYL 237
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 176 IDTLKLNGNKLASLKP 191
+ L + G L P
Sbjct: 298 LHCLVIRGASLVQWFP 313
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + D + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I I +FQ +R +D+S I I+S AF + I L ++ N+L S
Sbjct: 377 ISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 171 (65.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
C CSC G R V+C + +PEG+ TQ LD+S NNI L ++ F +
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPF--L 83
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS-LIY-IPYLKSINLAHNPIHQ 140
++L L L + +A G+ + L L +N L TVPS I+ + L+S+ L N I
Sbjct: 84 EELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITS 143
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + + + + L L N ++S+
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSI 192
Score = 149 (57.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 106 ELKVLTLQNNQLRTVPSEAI--HGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 164 SLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 224 LDNLETLDLNYNYL 237
Score = 130 (50.8 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ NNI+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 180 QALTLALNNISSIPDFAFTNL--SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYL 237
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 176 IDTLKLNGNKLASLKP 191
+ L + G L P
Sbjct: 298 LHCLVIRGASLVQWFP 313
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + D + + LDLS N + +PS L+ I+L N
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQRNQ 376
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I I +FQ +R +D+S I I+S AF + I L ++ N+L S
Sbjct: 377 ISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 170 (64.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 44/169 (26%), Positives = 85/169 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
C CSC G R V+C + +PEG+ TQ L L+ N+++ + + G+ +
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKAL--SGLKEL 83
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQ 140
+ L L+ +L+ V A RG++ + L L N +++VP S + L+ + L N + +
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + P ++ + ++ +I +I AF + + L L+ NK+ SL
Sbjct: 144 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSL 192
Score = 154 (59.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 82 ELKVLTLQNNQLKTVPSEAI--RGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 139
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 140 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG 199
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 200 LDNLETLDLNYNNL 213
Score = 129 (50.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + + + + LDLS N + +PS L+ I+L N
Sbjct: 293 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQRNQ 352
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I+QI +FQ +R +D+S IH I+S AF + I L ++ N+L S
Sbjct: 353 IYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTS 403
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ N I+ + F + +++ L+L K+ + F G+ N++ LDL+ N L
Sbjct: 156 QALTLALNKISSIPDFAFTNL--SSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNL 213
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 214 GEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSD 273
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G + P
Sbjct: 274 LHSLVIRGASMVQQFP 289
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 50/191 (26%), Positives = 90/191 (47%)
Query: 2 CHKFILSVFLLTLLASVTQAS-CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
C +LS+ LL L A+ A CP C C + R V C R +P+GI +T++L+
Sbjct: 3 CWLCVLSLPLLLLPAAPPPAGGCPARCECTVQT--RAVACTRRRLTAVPDGIPAETRLLE 60
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N I L + +++L L + + V+ AF + + L L N L +P
Sbjct: 61 LSRNRIRCLNPGDLA--ALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIP 118
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
++ + L ++L+ N + + Y+FQ +R +++ + + + AF G+ ++
Sbjct: 119 PGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEE 178
Query: 179 LKLNGNKLASL 189
L L L +L
Sbjct: 179 LTLERCNLTAL 189
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 30/105 (28%), Positives = 58/105 (55%)
Query: 92 LEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQST 149
LE V + RG+ N+ L ++ ++ VP+ L + +L +NL+HNPI + SF+
Sbjct: 235 LEEVAAGSLRGL-NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDL 293
Query: 150 PGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+R + ++ + + +AF G+ +I L L+ N L++L+ T+
Sbjct: 294 VRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTF 338
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/148 (26%), Positives = 74/148 (50%)
Query: 42 DRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFR 101
D+NF +P G+ L L +N +L++ + N+ L + + V A R
Sbjct: 215 DQNFRRLP-GL------LHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALR 267
Query: 102 GVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSN 159
++ L+LS N +STVP S + L+ ++LA + + +F IR +++SN
Sbjct: 268 HQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSN 327
Query: 160 CQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ T+ F+ ++ ++TL+++GN LA
Sbjct: 328 NLLSTLEESTFHSVNTLETLRVDGNPLA 355
>MGI|MGI:1913945 [details] [associations]
symbol:Aspn "asporin" species:10090 "Mus musculus"
[GO:0005509 "calcium ion binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO;IDA] [GO:0015288 "porin activity" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=ISO] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=ISO;IDA] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0046930 "pore complex" evidence=IEA]
[GO:0070171 "negative regulation of tooth mineralization"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913945
GO:GO:0005578 eggNOG:COG4886 GO:GO:0005509 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030282 CTD:54829
GeneTree:ENSGT00700000104006 HOGENOM:HOG000261690
HOVERGEN:HBG016052 KO:K08120 OMA:LCSAKPL OrthoDB:EOG4KWJT1
GO:GO:0070171 GO:GO:0030512 InterPro:IPR016352 PIRSF:PIRSF002490
EMBL:AF316825 EMBL:AK014504 EMBL:BC034888 IPI:IPI00117957
RefSeq:NP_001165952.1 RefSeq:NP_079987.2 UniGene:Mm.383216
ProteinModelPortal:Q99MQ4 SMR:Q99MQ4 STRING:Q99MQ4
PhosphoSite:Q99MQ4 PaxDb:Q99MQ4 PRIDE:Q99MQ4
Ensembl:ENSMUST00000021820 Ensembl:ENSMUST00000177948 GeneID:66695
KEGG:mmu:66695 InParanoid:Q99MQ4 NextBio:322397 Bgee:Q99MQ4
CleanEx:MM_ASPN Genevestigator:Q99MQ4 GermOnline:ENSMUSG00000021388
Uniprot:Q99MQ4
Length = 373
Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/171 (26%), Positives = 81/171 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C R V C D ++P I DT+++DL +N I +++ F G+T+
Sbjct: 67 TCPFGCQCY----SRVVHCSDLGLTSVPNNIPFDTRMVDLQNNKIKEIKENDF--KGLTS 120
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L L KL + + F + L LS N LS +P + +P L + + N + +
Sbjct: 121 LYALILNNNKLTKIHPKTFLTTKKLRRLYLSHNQLSEIP--LNLPKSLAELRIHDNKVKK 178
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 179 IQKDTFKGMNALHVLEMSANPLENNGIEPGAFEGVT-VFHIRIAEAKLTSI 228
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 165 (63.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/198 (29%), Positives = 92/198 (46%)
Query: 6 ILSVFLLTLLASVTQA-----SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
+LS+FLL L V +A SCP C C + C + +P+ + T +LD
Sbjct: 14 LLSLFLL--LFEVARAGRPVVSCPANCLC----ASNILSCSKQQLPNVPQSLPGYTALLD 67
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS NN++ L+ E + +TN+ L L L F+ AF V N+ LDLS N L T+
Sbjct: 68 LSHNNLSRLKAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLD 126
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG---IDK 175
++ + L+ + L +N I + +F+ ++ + +S I E + K
Sbjct: 127 EFLFSGLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNMISRFPLELIKDANRLPK 186
Query: 176 IDTLKLNGNKLASLKPRT 193
+ L L+ NKL L P T
Sbjct: 187 LTLLDLSSNKLKKL-PLT 203
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 171 (65.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ VEC IPE + T L L++N I++L+ + +T++
Sbjct: 375 CPHKCRCE----ASMVECSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKK-LTHL 429
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++ EL L+ N L ++ S ++ + L+++ L +N I
Sbjct: 430 KKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISC 489
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + QI TI AF + + TL L N
Sbjct: 490 IHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 533
Score = 105 (42.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
DLS N I + ++ F G T+++ L L K ++ +++ AFR + ++ L L++N ++T+
Sbjct: 1 DLSENTIQAIPRKAF--RGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTI 58
Query: 120 P--SLIYIPYLKSINLAHN 136
P S ++P L++ L N
Sbjct: 59 PVSSFNHMPKLRTFRLHSN 77
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 641 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPP 687
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 164 (62.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 53/194 (27%), Positives = 92/194 (47%)
Query: 7 LSVFLL----TLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
LS FLL LL S + CP+ C C+ GK V C F +PE I L Q L L
Sbjct: 10 LSCFLLHASVLLLLSKGERMCPVSCRCE---GK-IVYCESGGFQDVPENISLGCQGLSLR 65
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL 122
N++ +L F + + LYL + VD AF+G+ + EL LS N ++ + +
Sbjct: 66 YNSLLLLLPYQFAHLN--QLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNG 123
Query: 123 IY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+ +P L++++L++N + + F ++ + + + I +I F ++ L
Sbjct: 124 TFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLD 183
Query: 181 LNGNKLASLKPRTW 194
L N+L ++ T+
Sbjct: 184 LGYNRLRTITRTTF 197
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N+I+ + + F G+ +++L L K+ + + F V N+ LDLS N +
Sbjct: 86 LYLDHNSISTVDRLAF--QGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQD 143
Query: 119 -VPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
VP + + L++++L N I I +F + ++D+ ++ TI F G+ ++
Sbjct: 144 LVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRL 203
Query: 177 DTLKLNGNKLASL 189
L L N+ + +
Sbjct: 204 TELHLEHNQFSRI 216
Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N + L F G+ +Q L+LR + + R F +++ LDL N L T
Sbjct: 134 LDLSYNQMQDLVPGHF--HGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRT 191
Query: 119 VPSLIYIPYLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ ++ L+ ++L HN +I+ + F ++ + + +I T+ + + +
Sbjct: 192 ITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSPWTWHTL 251
Query: 177 DTLKLNGNKLASLKP 191
L L+GN++ L P
Sbjct: 252 QKLDLSGNEIQILDP 266
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 162 (62.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 55/195 (28%), Positives = 91/195 (46%)
Query: 1 MCHKFILSVFLLTLLASVTQA--SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQV 58
M +L L LLAS+ A +CP C C + + V C IP+ + T++
Sbjct: 1 MARPMLLLXLSLGLLASLLPALAACPQNCHCH--SDLQHVICDKVGLQKIPK-VSEKTKL 57
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L+L NN VL F M N+ L+L+ C++ V AFRG+ + L LS N +
Sbjct: 58 LNLQRNNFPVLATNSFRAM--PNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRV 115
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ + + + L + L HN + ++ + + ++N +I + S AF G +
Sbjct: 116 LRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDL 175
Query: 177 DTLKLNGNKLASLKP 191
L L+ N L+SL+P
Sbjct: 176 RWLYLSENSLSSLQP 190
Score = 134 (52.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 41 IDRNFYT-IPEGID---LDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+D N T +P G+ ++ +L L++N I L+ F G +++ LYL + L +
Sbjct: 132 LDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAF--QGAKDLRWLYLSENSLSSLQ 189
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
A V N+ + L N LS+ PS L + ++ + L+HNP+ I +FQS G RY
Sbjct: 190 PGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSF-G-RY 247
Query: 155 ID---MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + N + AF G+ + + L N+L L
Sbjct: 248 LETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQL 285
Score = 110 (43.8 bits), Expect = 0.00046, P = 0.00046
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
D + L LS N+++ LQ + N+ K YL + +L A + ++EL LS N
Sbjct: 174 DLRWLYLSENSLSSLQPGALDD--VENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHN 231
Query: 115 LLSTVPSLIYIP---YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY 171
L ++P + YL+++ L + + + S +F ++++ + N ++H + S +
Sbjct: 232 PLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQLPSN--F 289
Query: 172 GIDKIDTLKLNGN 184
D ++TL L N
Sbjct: 290 PFDSLETLTLTNN 302
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 44/170 (25%), Positives = 84/170 (49%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C G TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 33 ACPALCTC---TGT-TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLKQ 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPIH 139
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N +
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 169 (64.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
+ +CP C C+ VEC IPE I T L L++N I++L+ +
Sbjct: 509 SDVACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKK- 563
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHN 136
+++++K+ L K+ ++D F G T++ EL L+ N L +V S ++ + L+++ L +N
Sbjct: 564 LSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNN 623
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I I + SF +R + + + I TI AF + + TL L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 113 (44.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 29/102 (28%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + + Q L DLS N++ + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 44/170 (25%), Positives = 84/170 (49%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C G TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 33 ACPALCTC---TGT-TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLKQ 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPIH 139
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N +
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ +F+ ++ + + QI I AF + ++ L LN N + ++
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 169 (64.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
+ +CP C C+ VEC IPE I T L L++N I++L+ +
Sbjct: 509 SDVACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKK- 563
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHN 136
+++++K+ L K+ ++D F G T++ EL L+ N L +V S ++ + L+++ L +N
Sbjct: 564 LSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNN 623
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I I + SF +R + + + I TI AF + + TL L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 113 (44.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 29/102 (28%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + + Q L DLS N++ + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF--RGATDLKNLQLDKNQISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>UNIPROTKB|F1PB05 [details] [associations]
symbol:TSKU "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000372
SMART:SM00013 OMA:LTRVDCS GeneTree:ENSGT00390000016740
EMBL:AAEX03012791 Ensembl:ENSCAFT00000008391 Uniprot:F1PB05
Length = 365
Score = 162 (62.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDTQVLDL 61
+ LL + + T C GC C+ + V+C + +P I LDT LDL
Sbjct: 18 LLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIVPVPIPLDTAHLDL 77
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP- 120
SSN + + + + G T + L L L + AF + ++ LD+S N L+ +P
Sbjct: 78 SSNRLETVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDISHNGLAALPA 137
Query: 121 -SLIYIPYLKSINLAHNPIHQIS--SYSFQSTPGIRYIDMSNCQIHTIYSE---AFYGID 174
S P L +NL+HN + ++S ++S S ++D+S+ IH + A
Sbjct: 138 ESFTCSP-LSDVNLSHNRLREVSVSAFSTHSQGRALHVDLSHNLIHRLVPHPAGASLPTP 196
Query: 175 KIDTLKLNGNKLASL 189
I +L L N+L ++
Sbjct: 197 TIQSLNLAWNRLRTI 211
>UNIPROTKB|P21810 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA] [GO:0050840
"extracellular matrix binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009986 "cell
surface" evidence=IDA] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0030206
"chondroitin sulfate biosynthetic process" evidence=TAS]
[GO:0030207 "chondroitin sulfate catabolic process" evidence=TAS]
[GO:0030208 "dermatan sulfate biosynthetic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0030133 "transport
vesicle" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
PROSITE:PS51450 Reactome:REACT_116125 GO:GO:0009986 GO:GO:0005975
GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383 GO:GO:0001974
GO:GO:0043202 GO:GO:0005796 GO:GO:0030133 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0050840 GO:GO:0030207
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 EMBL:CH471172 EMBL:U82695 GO:GO:0030206
GO:GO:0005201 GO:GO:0030208 GO:GO:0005539 GO:GO:0019800 CTD:633
KO:K08118 OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:J04599 EMBL:M65153
EMBL:M65152 EMBL:BT007323 EMBL:BC002416 EMBL:BC004244 EMBL:U11686
IPI:IPI00010790 PIR:A40757 RefSeq:NP_001702.1 UniGene:Hs.821
ProteinModelPortal:P21810 SMR:P21810 IntAct:P21810 STRING:P21810
PhosphoSite:P21810 DMDM:266762 PaxDb:P21810 PRIDE:P21810 DNASU:633
Ensembl:ENST00000331595 GeneID:633 KEGG:hsa:633 UCSC:uc004fhr.2
GeneCards:GC0XP152762 HGNC:HGNC:1044 HPA:CAB003678 HPA:HPA003157
MIM:301870 neXtProt:NX_P21810 PharmGKB:PA25346 InParanoid:P21810
ChiTaRS:BGN GenomeRNAi:633 NextBio:2558 PMAP-CutDB:P21810
ArrayExpress:P21810 Bgee:P21810 CleanEx:HS_BGN
Genevestigator:P21810 GermOnline:ENSG00000182492 Uniprot:P21810
Length = 368
Score = 162 (62.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A CP GC C R V+C D ++P+ I DT +LDL +N+I+ L+K+ F G+
Sbjct: 61 AMCPFGCHCHL----RVVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDF--KGLQ 114
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIH 139
++ L L K+ + ++AF + + +L +S N L +P +P L + + N I
Sbjct: 115 HLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVELRIHDNRIR 172
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLASL 189
++ F + I+M + E AF G+ K++ L+++ KL +
Sbjct: 173 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI 223
>UNIPROTKB|P21809 [details] [associations]
symbol:BGN "Biglycan" species:9913 "Bos taurus" [GO:0030133
"transport vesicle" evidence=ISS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0050840 "extracellular
matrix binding" evidence=IEA] [GO:0042383 "sarcolemma"
evidence=IEA] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0005539 "glycosaminoglycan binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 GO:GO:0042383 GO:GO:0030133 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0050840
GeneTree:ENSGT00700000104006 HOGENOM:HOG000261690
HOVERGEN:HBG016052 InterPro:IPR016352 PIRSF:PIRSF002490
GO:GO:0005539 GO:GO:0019800 EMBL:S82652 EMBL:BT021201 EMBL:BC118460
IPI:IPI00697081 PIR:S32559 RefSeq:NP_847888.2 UniGene:Bt.5351
PDB:2FT3 PDBsum:2FT3 ProteinModelPortal:P21809 SMR:P21809
IntAct:P21809 STRING:P21809 PRIDE:P21809 Ensembl:ENSBTAT00000047242
GeneID:280733 KEGG:bta:280733 CTD:633 InParanoid:P21809 KO:K08118
OMA:IQFGNYK OrthoDB:EOG4868CN EvolutionaryTrace:P21809
NextBio:20804907 ArrayExpress:P21809 Uniprot:P21809
Length = 369
Score = 162 (62.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 12 LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L L A CP GC C R V+C D +P+ I DT +LDL +N+I+ L+K
Sbjct: 53 LDSLPPTYSAMCPFGCHCHL----RVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK 108
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + ++AF + + +L +S N L +P +P L
Sbjct: 109 DDF--KGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVE 164
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 165 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 223
Query: 189 L 189
+
Sbjct: 224 I 224
>MGI|MGI:2447899 [details] [associations]
symbol:Lrrc3 "leucine rich repeat containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2447899 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731
OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:AY061858 IPI:IPI00169651
RefSeq:NP_660134.1 UniGene:Mm.133301 ProteinModelPortal:P59034
SMR:P59034 PhosphoSite:P59034 PRIDE:P59034
Ensembl:ENSMUST00000057608 GeneID:237387 KEGG:mmu:237387
InParanoid:P59034 NextBio:383332 Bgee:P59034 CleanEx:MM_LRRC3
Genevestigator:P59034 GermOnline:ENSMUSG00000051652 Uniprot:P59034
Length = 257
Score = 157 (60.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 53/179 (29%), Positives = 75/179 (41%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
ASCP C C AG V C R IP I DT +L L +N I+ + F +
Sbjct: 31 ASCPQACQCPDHAGAVAVHCSSRGLQEIPRDIPADTVLLKLDANRISRVPNGAFQHL--P 88
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIH 139
+++L L +E + AF G+ + LDLS N + +P I L+HNP+H
Sbjct: 89 QLRELDLSHNAIEAIGPAAFSGLAGGLRLLDLSHNRIRRIPKDALGKLSAKIRLSHNPLH 148
Query: 140 -----QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
Q + + + P +D C HT E F G I L +G S +T
Sbjct: 149 CECALQEALWELKLDPDS--VDEIAC--HTSAQEQFVGKPLIQVLD-SGASFCSTHRKT 202
>UNIPROTKB|Q6ZSA7 [details] [associations]
symbol:LRRC55 "Leucine-rich repeat-containing protein 55"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 EMBL:AK127591 EMBL:BC136737
EMBL:BC136739 EMBL:BC150572 IPI:IPI00140246 RefSeq:NP_001005210.1
UniGene:Hs.199853 ProteinModelPortal:Q6ZSA7 SMR:Q6ZSA7
PhosphoSite:Q6ZSA7 DMDM:124056493 PRIDE:Q6ZSA7
Ensembl:ENST00000497933 GeneID:219527 KEGG:hsa:219527
UCSC:uc001njl.2 CTD:219527 GeneCards:GC11P056949 HGNC:HGNC:32324
HPA:HPA014053 neXtProt:NX_Q6ZSA7 PharmGKB:PA142671514
eggNOG:NOG244842 HOVERGEN:HBG081932 InParanoid:Q6ZSA7
OrthoDB:EOG4NS3BS GenomeRNAi:219527 NextBio:90671 Bgee:Q6ZSA7
CleanEx:HS_LRRC55 Genevestigator:Q6ZSA7 GermOnline:ENSG00000183908
Uniprot:Q6ZSA7
Length = 311
Score = 160 (61.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/183 (27%), Positives = 91/183 (49%)
Query: 6 ILSVFLLT-LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
++S+ L L+ S SCP+ C+C+ + V+C + +++P + +DT+ L L+ N
Sbjct: 33 LISLLLAAGLMHSDAGTSCPVLCTCR----NQVVDCSSQRLFSVPPDLPMDTRNLSLAHN 88
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
I + +L + +Q L L L + F + LDLS N S VP+ ++
Sbjct: 89 RITAVPPG-YLTCYM-ELQVLDLHNNSLMELPRGLFLHAKRLAHLDLSYNNFSHVPADMF 146
Query: 125 IPY--LKSINLAHNP-IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
L I+L+HNP + ++ +FQ +R +D+S + + EA G+ + TL++
Sbjct: 147 QEAHGLVHIDLSHNPWLRRVHPQAFQGLMQLRDLDLSYGGLAFLSLEALEGLPGLVTLQI 206
Query: 182 NGN 184
GN
Sbjct: 207 GGN 209
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 164 (62.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 48/191 (25%), Positives = 90/191 (47%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L ++L L A A CP C C + K T C + +P GI +Q + L N I
Sbjct: 11 LLAWVLWLQAWQVAAPCPGACVC-YNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRI 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY 124
+ + F N+ L+L L +D AF G+ +++LDLSDN L S P+ +
Sbjct: 70 SHVPAASF--RACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH 127
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ L +++L + ++ F+ ++Y+ + + + + + F + + L L+G
Sbjct: 128 GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 187
Query: 184 NKLASLKPRTW 194
N+++S+ R +
Sbjct: 188 NRISSVPERAF 198
>RGD|1549776 [details] [associations]
symbol:Aspn "asporin" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0015288
"porin activity" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=ISO] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISO]
[GO:0046930 "pore complex" evidence=IEA] [GO:0070171 "negative
regulation of tooth mineralization" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:1549776 GO:GO:0005578 eggNOG:COG4886
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030282 GO:GO:0015288 CTD:54829 GeneTree:ENSGT00700000104006
HOGENOM:HOG000261690 HOVERGEN:HBG016052 KO:K08120 OMA:LCSAKPL
OrthoDB:EOG4KWJT1 GO:GO:0070171 GO:GO:0030512 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0046930 EMBL:CH473977 EMBL:BC083711
IPI:IPI00365784 RefSeq:NP_001014030.1 RefSeq:XP_003751698.1
UniGene:Rn.160633 SMR:Q5XIH1 IntAct:Q5XIH1 STRING:Q5XIH1
Ensembl:ENSRNOT00000020704 GeneID:306805 KEGG:rno:306805
InParanoid:Q5XIH1 NextBio:656531 Genevestigator:Q5XIH1
Uniprot:Q5XIH1
Length = 375
Score = 162 (62.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/171 (26%), Positives = 81/171 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C R V C D ++P I DT+++DL +N I +++ F G+T+
Sbjct: 69 TCPFGCQCY----SRVVHCSDLGLTSVPSNIPFDTRMVDLQNNKIKEIKENDF--KGLTS 122
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L L KL + + F + L LS N LS +P + +P L + + N + +
Sbjct: 123 LYALILNNNKLTKIHPKTFLTTKKLRRLYLSHNQLSEIP--LNLPRSLAELRIHDNKVKK 180
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ + ++MS + I AF G+ + +++ KL S+
Sbjct: 181 IQKDTFKGMNALHVLEMSANPLDNNGIEPGAFEGVT-VFHIRIAEAKLTSI 230
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 163 (62.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 58/185 (31%), Positives = 90/185 (48%)
Query: 11 LLTLLA--SVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LLTLLA SVT SCP+ C+C + TV C NF ++P + TQ L L +N I
Sbjct: 18 LLTLLALPSVTP-SCPMLCTCY--SSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRS 74
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
L+ F G N+ L+L L + FR + ++ELDL DN L S P +
Sbjct: 75 LRPGTF---G-PNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGL 130
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS-NCQIHTIYSEAFYGIDKIDTLKLNGN 184
L+S++L + + F+ ++Y+ + N +H + + F + + L L+GN
Sbjct: 131 ERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLH-LQDDLFADLANLSHLFLHGN 189
Query: 185 KLASL 189
+L L
Sbjct: 190 RLRLL 194
Score = 126 (49.4 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 39/159 (24%), Positives = 75/159 (47%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVL---DLSSN-NINVLQKEIFLQMGITNIQKLYLRKCKL 92
T+ N TI G Q L DL N ++ L+ + F G+ +Q L+L +C+L
Sbjct: 86 TLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTF--QGLERLQSLHLYRCQL 143
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ FRG+ ++ L L +N L + ++ + L + L N + ++ + F+
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + ++ ++ AF+G+ ++ L L N LASL
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASL 242
>UNIPROTKB|E1BKC2 [details] [associations]
symbol:RXFP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0007189 InterPro:IPR003591 SMART:SM00369
GO:GO:0008584 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000093266 OMA:KILCCAD EMBL:DAAA02033083
IPI:IPI00687137 ProteinModelPortal:E1BKC2
Ensembl:ENSBTAT00000020135 Uniprot:E1BKC2
Length = 755
Score = 152 (58.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 41/173 (23%), Positives = 88/173 (50%)
Query: 24 PLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQ 83
P C CK G +EC++ ++P + + +L L NNI+ L ++F++ T ++
Sbjct: 113 PQRCVCK---GTE-LECVNAGLKSVPV-VSSNVTLLSLKKNNIHSLSDKVFIKY--TELK 165
Query: 84 KLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQI 141
K++L++ + ++ +AF G+ N+ L L+ N ++T+ ++ + L + L NPI +I
Sbjct: 166 KIFLQRNCITYISRKAFFGLHNLQILYLNHNCITTLRPGVFKDLHQLTWLILDDNPISRI 225
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
S F + ++ M N + + + + +++ + L GN + L T+
Sbjct: 226 SQRLFTGLNSLFFLSMVNNHLQVLPKQMCAQMPQLNWMDLEGNGIKFLTNSTF 278
Score = 148 (57.2 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 35/135 (25%), Positives = 67/135 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DL N I L FL +++ L+L + ++ FV ++ F + N+ ELDLS N++S
Sbjct: 263 MDLEGNGIKFLTNSTFLSC--SSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNMISE 320
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P I+ + L+ +NL+ NP+ + F S ++ +D+ +I I + F + +
Sbjct: 321 LPPHIFKDLKCLQKLNLSSNPLLYLHKSQFGSLKQLQSLDLERIEIPNINTRMFQPMKNL 380
Query: 177 DTLKLNGNKLASLKP 191
+ + S P
Sbjct: 381 SYIYFKNFRYCSYAP 395
Score = 39 (18.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 5 FILSVFLLT-LLASVTQASCPLGCS 28
F ++V +L ++ ++TQ +C C+
Sbjct: 11 FGMTVIILNVIIKNITQRNCKTDCA 35
>UNIPROTKB|E1BT96 [details] [associations]
symbol:E1BT96 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0070171 "negative regulation
of tooth mineralization" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 InterPro:IPR003591 SMART:SM00369
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 GO:GO:0070171 GO:GO:0030512
EMBL:AADN02013901 IPI:IPI00602330 Ensembl:ENSGALT00000007519
OMA:NRNIREV Uniprot:E1BT96
Length = 571
Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 50/171 (29%), Positives = 86/171 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP GC C R V C D +IP I DT+++DL +N I + KE LQ G+ +
Sbjct: 32 TCPFGCQCY----VRVVHCSDLGLTSIPRNIPPDTRMIDLQNNKIREV-KENDLQ-GLAS 85
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L L K+ + +AF+ N+ L LS N L+ +P+ +P L + + N + +
Sbjct: 86 LYALALNNNKITKIHPKAFQPTKNLRRLYLSHNQLTEIPT--NLPKTLAELRIHANKVKK 143
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASL 189
I +F+ + ++MS ++ I AF G++ I +++ KL S+
Sbjct: 144 IPKDAFKGMKSLHVLEMSANPLNNDGIEPGAFEGVN-IYHIRIAEAKLTSI 193
>UNIPROTKB|A6NLG9 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0044424 "intracellular
part" evidence=IEA] [GO:0050840 "extracellular matrix binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383
GO:GO:0001974 GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 HOGENOM:HOG000261690 HOVERGEN:HBG016052
InterPro:IPR016352 PIRSF:PIRSF002490 EMBL:U82695 GO:GO:0005539
GO:GO:0019800 GO:GO:0044424 UniGene:Hs.821 HGNC:HGNC:1044
ChiTaRS:BGN EMBL:AK094059 IPI:IPI00643384 SMR:A6NLG9 STRING:A6NLG9
Ensembl:ENST00000370204 Uniprot:A6NLG9
Length = 307
Score = 159 (61.0 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 47/170 (27%), Positives = 84/170 (49%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP GC C R V+C D ++P+ I DT +LDL +N+I+ L+K+ F G+ ++
Sbjct: 2 CPFGCHCHL----RVVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDF--KGLQHL 55
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQI 141
L L K+ + ++AF + + +L +S N L +P +P L + + N I ++
Sbjct: 56 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVELRIHDNRIRKV 113
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLASL 189
F + I+M + E AF G+ K++ L+++ KL +
Sbjct: 114 PKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI 162
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 165 (63.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 49/173 (28%), Positives = 90/173 (52%)
Query: 7 LSVFLLTLLAS----VTQASCPLGCSCKWK-----AGKRTVECIDRNFYTIPEGIDLDTQ 57
L+VFL LLAS + +++CP CSC + + R+V C D +P DT
Sbjct: 3 LTVFLGLLLASGGFPLVRSTCPTQCSCFYHNLSDGSRARSVICNDPEISLVPASFPGDTS 62
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
L + I + E F + +N++ L++ L ++ +FRG+ +++EL L N LS
Sbjct: 63 KLRIEKTAIKRIPSEAFSYL--SNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLS 120
Query: 118 TVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE 168
+ P SL+ +P L+ +++ +N + + S + I Y+D+S+ + T+ +E
Sbjct: 121 SFPWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAE 173
>ZFIN|ZDB-GENE-050522-29 [details] [associations]
symbol:zgc:113307 "zgc:113307" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050522-29
eggNOG:COG4886 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:BC095895
IPI:IPI00607427 RefSeq:NP_001018560.1 UniGene:Dr.91088
ProteinModelPortal:Q501S3 DNASU:553753 GeneID:553753
KEGG:dre:553753 InParanoid:Q501S3 OrthoDB:EOG4H9XNG
NextBio:20880475 Uniprot:Q501S3
Length = 343
Score = 160 (61.4 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 53/175 (30%), Positives = 82/175 (46%)
Query: 17 SVTQASCPLGCSC--KWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIF 74
+V SCPL C C +W + C R +P G+ Q L L NNI L F
Sbjct: 35 AVNTQSCPLECDCPIQWPTA---IYCDHRGLNQLPSGLPFRLQYLFLQGNNITSLGSRAF 91
Query: 75 LQMGITNIQKLYLRKCKL--EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSI 131
T ++ L L +L E +D+ F +T + L ++ N L+ VP+ +P LK +
Sbjct: 92 --DNTTYLRWLILDHNELLSEQLDNVLFSSLTRLVNLFINHNNLTKVPA--GLPSGLKQL 147
Query: 132 NLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
LA+N I +IS FQ+ + I + ++ TI F G+ ++ L L+ N L
Sbjct: 148 RLAYNHIEKISEGDFQNLDSLTLILLQGNRLKTIEEGDFKGLGALNLLDLSHNFL 202
Score = 117 (46.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 32/147 (21%), Positives = 75/147 (51%)
Query: 44 NFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGV 103
N +P G+ + L L+ N+I + + F + ++ + L+ +L+ +++ F+G+
Sbjct: 132 NLTKVPAGLPSGLKQLRLAYNHIEKISEGDF--QNLDSLTLILLQGNRLKTIEEGDFKGL 189
Query: 104 TNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIH 163
++ LDLS N L T P + P ++ + L++N + +S S + G+RY+ + + ++
Sbjct: 190 GALNLLDLSHNFLDTFPKHLP-PSVQQLYLSNNSLTGLSENSLHAFSGLRYLRLGHNKLR 248
Query: 164 TIYSE-AFYGIDKIDTLKLNGNKLASL 189
+ + + + L L+ N+L +
Sbjct: 249 NERLDPGAFNLTSLVELDLSYNRLTEI 275
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 158 (60.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 45/185 (24%), Positives = 92/185 (49%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C L + L LL + A CP GC+C TV+C DR ++P+ LD + L +
Sbjct: 8 CAAAALGLCSLLLLLAPGHA-CPAGCAC---TDPHTVDCRDRGLPSVPDPFPLDVRKLLV 63
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
+ N I + ++ F+ G ++ L R L +++ F G + LDLS N L+ + +
Sbjct: 64 AGNRIQRIPEDFFIFYG--DLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGA 121
Query: 122 LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
+ L ++LA+N + + +F++ ++ +++++ + ++ A + + +L
Sbjct: 122 GAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVAALAALPALRSL 181
Query: 180 KLNGN 184
+L+GN
Sbjct: 182 RLDGN 186
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 169 (64.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
+ +CP C C+ VEC IPE I T L L++N I++L+ +
Sbjct: 395 SDVACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKK- 449
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHN 136
+++++K+ L K+ ++D F G T++ EL L+ N L +V S ++ + L+++ L +N
Sbjct: 450 LSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNN 509
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I I + SF +R + + + I TI AF + + TL L N
Sbjct: 510 RISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 557
Score = 113 (44.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/102 (28%), Positives = 59/102 (57%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + + Q L DLS N++ + ++ F G T+++ L L K ++ ++
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF--RGATDLKNLQLDKNQISCIE 59
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 60 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 101
Score = 58 (25.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 665 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 711
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 158 (60.7 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 44/176 (25%), Positives = 89/176 (50%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
LL LL +CP GC+C TV+C DR ++P+ LD + L ++ N I +
Sbjct: 22 LLVLLGP--GRACPAGCAC---TDPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIP 76
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYL 128
++ F+ G ++ L R L +++ F G + LDLS N L+ + + + L
Sbjct: 77 EDFFIFHG--DLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRL 134
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
++LA+N + + +F+S ++ +++++ + ++ A + + T++L+GN
Sbjct: 135 VKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
>UNIPROTKB|Q8WUA8 [details] [associations]
symbol:TSKU "Tsukushin" species:9606 "Homo sapiens"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643 KO:K08130
OrthoDB:EOG4V171F EMBL:AF191019 EMBL:AY358317 EMBL:BT007440
EMBL:AK075476 EMBL:BC020975 EMBL:AL110276 IPI:IPI00641368
PIR:T14791 RefSeq:NP_001245139.1 RefSeq:NP_056331.2 UniGene:Hs.8361
ProteinModelPortal:Q8WUA8 SMR:Q8WUA8 MINT:MINT-1180605
STRING:Q8WUA8 DMDM:116242832 PRIDE:Q8WUA8 DNASU:25987
Ensembl:ENST00000333090 Ensembl:ENST00000527881 GeneID:25987
KEGG:hsa:25987 UCSC:uc001oxt.3 GeneCards:GC11P076494
HGNC:HGNC:28850 HPA:HPA008164 MIM:608015 neXtProt:NX_Q8WUA8
PharmGKB:PA162407150 InParanoid:Q8WUA8 OMA:LTRVDCS PhylomeDB:Q8WUA8
ChiTaRS:TSKU GenomeRNAi:25987 NextBio:47676 ArrayExpress:Q8WUA8
Bgee:Q8WUA8 CleanEx:HS_TSKU Genevestigator:Q8WUA8
GermOnline:ENSG00000182704 Uniprot:Q8WUA8
Length = 353
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 52/191 (27%), Positives = 89/191 (46%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDTQVLDL 61
+ LL + + T C GC C+ + V+C + +P I LDT LDL
Sbjct: 6 LLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDTAHLDL 65
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
SSN + ++ + + G T + L L L + AF + ++ LDLS N L+ +P+
Sbjct: 66 SSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGLTALPA 125
Query: 122 LIYIPY-LKSINLAHNPIHQISSYSFQSTPGIR--YIDMSNCQIHTIY---SEAFYGIDK 175
+ L +NL+HN + ++S +F + R ++D+S+ IH + + A
Sbjct: 126 ESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAGLPAPT 185
Query: 176 IDTLKLNGNKL 186
I +L L N+L
Sbjct: 186 IQSLNLAWNRL 196
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 167 (63.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 37/138 (26%), Positives = 74/138 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDL N+ + + + ++QKL L KC+L F+++R + + N+ LDLS N +
Sbjct: 376 LDLGQNSDLIYLNDSEFN-ALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKS 434
Query: 119 VPSLIYIP--YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
P + P +L+ ++L+ NPI ++++ +F ++ ++++ C I TI +F +
Sbjct: 435 FPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNL 494
Query: 177 DTLKLNGNKLASLKPRTW 194
+ L L N + +L T+
Sbjct: 495 EVLDLGDNNIRTLNHGTF 512
Score = 140 (54.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/139 (28%), Positives = 67/139 (48%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+ L LS N I L F G+ +++L L C + +D +F N++ LDL DN +
Sbjct: 447 EFLSLSRNPITELNNLAF--SGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 504
Query: 117 STVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
T+ + P L+S+ L+HN + + SF +R +D+ + + F G++
Sbjct: 505 RTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLE 564
Query: 175 KIDTLKLNGNKLASLKPRT 193
K+ LKL NK+ RT
Sbjct: 565 KLLILKLGFNKITYETTRT 583
Score = 122 (48.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L+L+ ++ + + + N+ L L K + D AF + +++ L LS N +
Sbjct: 399 QKLNLNKCQLSFINNRTW--SSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPI 456
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ + +L + + LK +NLA I I YSF P + +D+ + I T+ F +
Sbjct: 457 TELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLK 516
Query: 175 KIDTLKLNGNKLASLKPRTWS 195
K+ +L L+ N L L+P ++S
Sbjct: 517 KLQSLILSHNCLKILEPNSFS 537
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 38 VECIDRNFYTIPEGI-DLD--TQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEF 94
V CI + + E I D+ T L+L+ N I VL F + + L L +
Sbjct: 84 VLCIRKKITNLTEAISDIPRYTTHLNLTHNEIQVLPPWSFTNLSA--LVDLRLEWNSIWK 141
Query: 95 VDDRAFRGVTNMDELDLSDNLLSTVP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIR 153
+D+ AFRG+ N+ L+L +N + +V S + LK++ L+HN I I +F ++
Sbjct: 142 IDEGAFRGLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLK 201
Query: 154 YIDMSNCQIHTIYS--EAFYGIDKIDTLKLNGNKLASL--KPRT 193
Y+ +S I EA + ++ L L N + L PR+
Sbjct: 202 YLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRS 245
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 169 (64.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 51/190 (26%), Positives = 93/190 (48%)
Query: 2 CHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDL 61
C + V++L LL T + CP C+C +G TV+C IP I +T+ L+L
Sbjct: 7 CCLLEVCVWVL-LLVCKTGSGCPALCTC---SGT-TVDCHGLGLKNIPRNIPRNTERLEL 61
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
+ NN+ + + F G+ ++ L L + ++ V+ AF + ++ L L+ N L +P
Sbjct: 62 NGNNLTRINRNDFT--GLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPE 119
Query: 122 LIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTL 179
L++ L ++L+ N I I +F+ I+ + + I I AF + ++ L
Sbjct: 120 LLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVL 179
Query: 180 KLNGNKLASL 189
LN N ++S+
Sbjct: 180 TLNNNNISSI 189
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C+ V+C + IPE + T L++N I ++ + +T++
Sbjct: 506 CPAKCRCE----SNVVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFKT-LTHL 560
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
+K+ L K+ ++D AF G ++++EL L+ N L S ++ + L+ + L +N I
Sbjct: 561 KKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISC 620
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I + SF +R + + + + TI AF + + TL L N
Sbjct: 621 IHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLAN 664
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 38/170 (22%), Positives = 76/170 (44%)
Query: 17 SVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQ 76
S++ SCP CSC V+C + IP + + L N+I + F
Sbjct: 269 SLSSGSCPAVCSCN----NNIVDCRGKGPTLIPSSLPDSMTEIRLEQNSIKSIPPGAFSP 324
Query: 77 MGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLA 134
++++ L ++ + AF+G+ +++ L L N ++ +P ++ + L+ + L
Sbjct: 325 Y--KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLN 382
Query: 135 HNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
N IH + + +FQ + + + + +I T+ F + I TL L N
Sbjct: 383 ANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQN 432
Score = 111 (44.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N I + ++ F G T+I+ L L K + ++D AFR + ++ L L++N +S+
Sbjct: 131 LDLSENFIQAIPRKAF--RGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISS 188
Query: 119 VP--SLIYIPYLKSINLAHN 136
+P S ++P L++ L N
Sbjct: 189 IPVSSFNHMPKLRTFRLHSN 208
Score = 55 (24.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 19/69 (27%), Positives = 38/69 (55%)
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
YL L+ P ++SS F+S ++ +D+SN +I ++ + +F + ++ TL L+ N L
Sbjct: 760 YLDGNQLSTVP-KELSS--FKS---LQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 187 ASLKPRTWS 195
+ +S
Sbjct: 814 RCIPTLAFS 822
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 152 (58.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 42/168 (25%), Positives = 88/168 (52%)
Query: 24 PLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQ 83
P C C+ ++C +F +P + ++ ++ L N + L ++FL+ ++Q
Sbjct: 98 PAECQCR----DLELDCDGAHFKDVPM-VSINVTMMSLQRNGLRKLNADMFLKY--QSLQ 150
Query: 84 KLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHNPIHQI 141
KLYL+ +++ V +AFRG+ N+ L LS N ++T+ P + + L+ + L +N +H I
Sbjct: 151 KLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSLHHI 210
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
SS +F + + + N + T + + +++ L + GNK+ ++
Sbjct: 211 SSLTFSGLRSLVLLVLLNNAL-TKLDDICLEMPRLNWLDIEGNKMETV 257
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 5 FILSVFLLTLL-ASVTQASCPLG 26
F S +LT+ S Q CPLG
Sbjct: 10 FFSSEVVLTMFNVSEDQPYCPLG 32
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 163 (62.4 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 41/141 (29%), Positives = 76/141 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+ L +SSN++ L E F G++ +Q L + +L F+ + ++ + LDLS N L
Sbjct: 121 KTLIISSNDVQ-LGPECFA--GLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKL 177
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
++P+ + + L+++ L N + + + F S ++++D+S I I A YG++
Sbjct: 178 LSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLE 237
Query: 175 KIDTLKLNGNKLASLKPRTWS 195
K++TL L N+L L TWS
Sbjct: 238 KLETLNLTNNQLVRLPGNTWS 258
Score = 145 (56.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 47/183 (25%), Positives = 90/183 (49%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+ LL L++ V SC GC C K T C + +IP +D T VLDLS+N I+
Sbjct: 6 LILLVLVSGVI--SCQSGCKCPTKT---TAVCKGSSLRSIPILLDPRTTVLDLSNNRISR 60
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IP 126
L + L + N+++L L + + F + ++ LDLS N L ++P+ ++ +
Sbjct: 61 LSADE-LSL-YPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLK 118
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
LK++ ++ N + Q+ F ++ + +++ ++ + + + L L+ NKL
Sbjct: 119 NLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKL 177
Query: 187 ASL 189
S+
Sbjct: 178 LSM 180
>UNIPROTKB|F1S2B6 [details] [associations]
symbol:BGN "Biglycan" species:9823 "Sus scrofa" [GO:0050840
"extracellular matrix binding" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0030133 "transport vesicle" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383 GO:GO:0031012
GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0050840 GeneTree:ENSGT00700000104006 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 OMA:IQFGNYK
EMBL:FP102397 Ensembl:ENSSSCT00000013956 ArrayExpress:F1S2B6
Uniprot:F1S2B6
Length = 372
Score = 160 (61.4 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 12 LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L L A CP GC C R V+C D +P+ I DT +LDL +N+I+ L+K
Sbjct: 56 LDALPPTFSAMCPFGCHCHL----RVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK 111
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + +AF + + +L +S N L +P +P L
Sbjct: 112 DDF--KGLQHLYALVLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLAE 167
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 168 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 226
Query: 189 L 189
+
Sbjct: 227 I 227
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 162 (62.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L ++L L A CP C C + K T C + +P GI +Q + L N I
Sbjct: 11 LLAWVLWLQAWRVATPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRI 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTV-PSLIY 124
+ + F N+ L+L L +D AF G+T +++LDLSDN L V P+ +
Sbjct: 70 SHVPAASF--QSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFH 127
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ +L +++L + ++ F+ ++Y+ + + + + F + + L L+G
Sbjct: 128 GLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHG 187
Query: 184 NKLASL 189
N++ S+
Sbjct: 188 NRIPSV 193
>UNIPROTKB|F1SUL0 [details] [associations]
symbol:TSKU "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 KO:K08130
OMA:LTRVDCS GeneTree:ENSGT00390000016740 EMBL:CU463147
RefSeq:XP_003129720.1 RefSeq:XP_003129721.1
Ensembl:ENSSSCT00000016224 GeneID:100522628 KEGG:ssc:100522628
Uniprot:F1SUL0
Length = 357
Score = 159 (61.0 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 54/199 (27%), Positives = 93/199 (46%)
Query: 6 ILSVFLLTLLASVTQASCPL--GCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDT 56
+L LL L AS QA+ P GC C+ + V+C + +P I LDT
Sbjct: 5 LLPPLLLLLAASRAQATRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIVPVPIPLDT 64
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
LDLSSN + + + + G T + L L L + AF + ++ LDLS N L
Sbjct: 65 AHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTSLSPTAFSRLRYLESLDLSHNGL 124
Query: 117 STVPSLIYIPY-LKSINLAHNPIHQ--ISSYSFQSTPGIRYIDMSNCQIHTIY---SEAF 170
+ +P+ + L +NL+HN + + +S+++ S ++D+S+ + + + A
Sbjct: 125 AALPAQSFTSSPLSDVNLSHNRLRELSVSAFATHSQGRALHVDLSHNLLQRLAPHPARAS 184
Query: 171 YGIDKIDTLKLNGNKLASL 189
I +L L N+L ++
Sbjct: 185 LPAPTIQSLNLAWNRLRAV 203
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 163 (62.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 48 IPEGI--DL-DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVT 104
+P G+ DL Q L+L N + VL F+ G+ ++ L L + + + F+ +
Sbjct: 147 VPRGVFNDLVSVQYLNLQRNRLTVLGSGTFV--GMVALRILDLSNNNILRISESGFQHLE 204
Query: 105 NMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI 162
N+ L L N L+ VPS + + L+ ++L+HNPI I ++F+ + Y+ + N +I
Sbjct: 205 NLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRI 264
Query: 163 HTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ + F GI+ + L L+ N L +L T+S
Sbjct: 265 RNVTRDGFSGINNLKHLILSHNDLENLNSDTFS 297
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/166 (22%), Positives = 80/166 (48%)
Query: 25 LGCS--CKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
LGCS C+ G R + C + +IP+ T L L+ NNI+ + + G+ ++
Sbjct: 30 LGCSSVCQLCTG-RQINCRNLGLSSIPKNFPESTVFLYLTGNNISYINESELT--GLHSL 86
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
LYL + +V +AF + ++ L L++N + + I+ + L+++ L +N +
Sbjct: 87 VALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSF 146
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ F ++Y+++ ++ + S F G+ + L L+ N +
Sbjct: 147 VPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNI 192
Score = 119 (46.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 35/135 (25%), Positives = 70/135 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L++N I L IF G+ N++ LYL+ ++ FV F + ++ L+L N L+
Sbjct: 113 LFLNNNFIKRLDPGIF--KGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTV 170
Query: 119 VPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ S ++ L+ ++L++N I +IS FQ + + + + + + S AF + +
Sbjct: 171 LGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSL 230
Query: 177 DTLKLNGNKLASLKP 191
L L+ N + +++P
Sbjct: 231 RRLSLSHNPIEAIQP 245
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L ++NI + + F+Q+ ++ L+L ++ +D F+G+ N+ L L N +S
Sbjct: 89 LYLDNSNILYVYPKAFVQL--RHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSF 146
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
VP ++ + ++ +NL N + + S +F +R +D+SN I I F ++ +
Sbjct: 147 VPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENL 206
Query: 177 DTLKLNGNKLASL 189
L L N L +
Sbjct: 207 ACLYLGSNNLTKV 219
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 35/137 (25%), Positives = 70/137 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L SNN+ + F ++ + ++++L L +E + AF+G+ N++ L L ++ +
Sbjct: 209 LYLGSNNLTKVPSNAF-EV-LKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRN 266
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID-K 175
V I LK + L+HN + ++S +F + Y+ + +I +I ++ F +
Sbjct: 267 VTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGAS 326
Query: 176 IDTLKLNGNKLASLKPR 192
+ L L+ N L +L PR
Sbjct: 327 LKILNLSFNNLTALHPR 343
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 33/140 (23%), Positives = 69/140 (49%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++LDLS+NNI + + F + N+ LYL L V AF + ++ L LS N +
Sbjct: 183 RILDLSNNNILRISESGFQHL--ENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPI 240
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ + + L+ + L ++ I ++ F ++++ +S+ + + S+ F +
Sbjct: 241 EAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLK 300
Query: 175 KIDTLKLNGNKLASLKPRTW 194
+ LKL+ N++ S+ T+
Sbjct: 301 NLIYLKLDRNRIISIDNDTF 320
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 161 (61.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/186 (24%), Positives = 85/186 (45%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L ++L L A CP C C + K T C + +P GI +Q + L N I
Sbjct: 11 LLAWVLWLQAWRVATPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRI 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTVPSLIY- 124
+ + F N+ L+L L +D AF G+T +++LDLSDN L V +
Sbjct: 70 SYVPAASF--QSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFR 127
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ +L +++L + ++ F+ ++Y+ + + + + F + + L L+G
Sbjct: 128 GLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHG 187
Query: 184 NKLASL 189
N++ S+
Sbjct: 188 NRIPSV 193
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 164 (62.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 53/191 (27%), Positives = 94/191 (49%)
Query: 6 ILSVFLLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
+L + LL L + A+ CP C C +R V C +N +P I TQ LDL
Sbjct: 10 VLLLPLLLPLGPIWHAAAQRCPQTCICD--NSRRHVACRHQNLTEVPNAIPELTQRLDLR 67
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-- 120
N + V+ F + + L LR C++E V + AFRG+ + L+L+ N LS +P
Sbjct: 68 GNVLRVIPPAAF--QDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQE 125
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+L + L+ + L N + ++ +F + + +++++ + + AF G+ + L+
Sbjct: 126 ALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQ 185
Query: 181 LNGNKLASLKP 191
L+ N L+ L P
Sbjct: 186 LSHNALSVLAP 196
Score = 142 (55.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP C C ++ R C R +P G DTQ+LDL N+ ++ + F G+ +
Sbjct: 389 CPRACVCVPES--RHSGCEARGLRAVPRGFPNDTQLLDLRRNHFPLVPRAAF--QGLGRL 444
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS--TVPSLIYIPYLKSINLAHNPIHQ 140
L+L+ C + ++ A G+ ++ L LSDN LS + +L P L + L N Q
Sbjct: 445 VSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQ 504
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + + P + + + + + + G + L L+GN+L + P
Sbjct: 505 VPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSP 555
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDL + ++ + F G+ + L L +L + A G+ ++ L+L NLL
Sbjct: 88 LDLRHCQVELVAEGAF--RGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEE 145
Query: 119 V-PSLI-YIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P + L ++NLAHN + + +FQ R++ +S+ + + EA G+ +
Sbjct: 146 LRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPAL 205
Query: 177 DTLKLNGNKLASL 189
L L+ N+L SL
Sbjct: 206 RRLSLHHNELQSL 218
>UNIPROTKB|Q86WK6 [details] [associations]
symbol:AMIGO1 "Amphoterin-induced protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0007413 "axonal fasciculation" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237007
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042552
GO:GO:0050772 GO:GO:0007157 InterPro:IPR000372 SMART:SM00013
EMBL:AK295678 EMBL:AL355145 EMBL:BC040879 EMBL:AB032989
IPI:IPI00410140 RefSeq:NP_065754.2 UniGene:Hs.726479
ProteinModelPortal:Q86WK6 SMR:Q86WK6 STRING:Q86WK6
PhosphoSite:Q86WK6 DMDM:68052342 PaxDb:Q86WK6 PRIDE:Q86WK6
DNASU:57463 Ensembl:ENST00000369862 Ensembl:ENST00000369864
GeneID:57463 KEGG:hsa:57463 UCSC:uc001dxx.4 CTD:57463
GeneCards:GC01M110046 HGNC:HGNC:20824 HPA:HPA046152
neXtProt:NX_Q86WK6 PharmGKB:PA142672625 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 InParanoid:Q86WK6
OMA:SVELKVY OrthoDB:EOG4TB4BP PhylomeDB:Q86WK6 ChiTaRS:AMIGO1
GenomeRNAi:57463 NextBio:63666 Bgee:Q86WK6 CleanEx:HS_AMIGO1
Genevestigator:Q86WK6 GermOnline:ENSG00000181754 GO:GO:0007413
GO:GO:0007156 InterPro:IPR013106 Pfam:PF07686 Uniprot:Q86WK6
Length = 493
Score = 161 (61.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 53/189 (28%), Positives = 85/189 (44%)
Query: 7 LSVFLLTLL-ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
LS+ L + A SCP C C + C + +P + T +LDLS NN
Sbjct: 17 LSLLLFEVARAGRAVVSCPAACLC----ASNILSCSKQQLPNVPHSLPSYTALLDLSHNN 72
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY- 124
++ L+ E + +T + L L L F+ AF V N+ LDLS N L T+ ++
Sbjct: 73 LSRLRAE-WTPTRLTQLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFS 131
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY-G--IDKIDTLK 180
+ L+ + L +N I + +F ++ + +S QI E G + K+ L
Sbjct: 132 DLQVLEVLLLYNNHIMAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLD 191
Query: 181 LNGNKLASL 189
L+ NKL +L
Sbjct: 192 LSSNKLKNL 200
>UNIPROTKB|O02678 [details] [associations]
symbol:BGN "Biglycan" species:9615 "Canis lupus familiaris"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0050840 "extracellular matrix binding" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0030133 "transport
vesicle" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0005539 "glycosaminoglycan
binding" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383 GO:GO:0030133
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 CTD:633 KO:K08118
OrthoDB:EOG4868CN EMBL:U83140 RefSeq:NP_001003229.1
UniGene:Cfa.45046 ProteinModelPortal:O02678 SMR:O02678
STRING:O02678 GeneID:403905 KEGG:cfa:403905 InParanoid:O02678
NextBio:20817397 Uniprot:O02678
Length = 369
Score = 158 (60.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 12 LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L L A CP GC C R V+C D +P+ I DT +LDL +N+I+ L+
Sbjct: 53 LDALTPTYSAMCPFGCHCHL----RVVQCSDLGLKAVPKEISPDTMLLDLQNNDISELRA 108
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + ++AF + + +L +S N L +P +P L
Sbjct: 109 DDF--KGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVE 164
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 165 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 223
Query: 189 L 189
+
Sbjct: 224 I 224
>UNIPROTKB|G1K2D8 [details] [associations]
symbol:BGN "Biglycan" species:9615 "Canis lupus familiaris"
[GO:0050840 "extracellular matrix binding" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0030133 "transport vesicle" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383 GO:GO:0031012
GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0050840 GeneTree:ENSGT00700000104006 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 OMA:IQFGNYK
EMBL:AAEX03027076 Ensembl:ENSCAFT00000030457 Uniprot:G1K2D8
Length = 372
Score = 158 (60.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 12 LTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
L L A CP GC C R V+C D +P+ I DT +LDL +N+I+ L+
Sbjct: 56 LDALTPTYSAMCPFGCHCHL----RVVQCSDLGLKAVPKEISPDTMLLDLQNNDISELRA 111
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKS 130
+ F G+ ++ L L K+ + ++AF + + +L +S N L +P +P L
Sbjct: 112 DDF--KGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP--NLPSSLVE 167
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE--AFYGIDKIDTLKLNGNKLAS 188
+ + N I ++ F + I+M + E AF G+ K++ L+++ KL
Sbjct: 168 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 226
Query: 189 L 189
+
Sbjct: 227 I 227
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 157 (60.3 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 54/194 (27%), Positives = 90/194 (46%)
Query: 1 MCHKFILS-VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVL 59
M + S VFL LL ++ A+CP C C + V C IP+ + T++L
Sbjct: 1 MARALLFSLVFLAILLPAL--AACPQNCHCH--GDLQHVICDKVGLQKIPK-VSETTKLL 55
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
+L NN VL F M N+ L+L+ C + V AFRG+ + L LS N + +
Sbjct: 56 NLQRNNFPVLAANSFRTM--PNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVL 113
Query: 120 PSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID 177
+ + + L + L HN + ++ + + ++N +I + + AF G +
Sbjct: 114 RAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 173
Query: 178 TLKLNGNKLASLKP 191
L L+ N L+SL+P
Sbjct: 174 WLYLSENALSSLQP 187
Score = 129 (50.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
+L L++N I L+ F G +++ LYL + L + + V N+ + L N LS
Sbjct: 150 ILQLNNNKIRELRAGAF--QGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLS 207
Query: 118 TVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYID---MSNCQIHTIYSEAFYG 172
+ PS L + ++ + L+HNP+ I +FQS G RY++ + N + AF G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSF-G-RYLETLWLDNTNLEKFSDAAFSG 265
Query: 173 IDKIDTLKLNGNKLASL 189
+ + + L+ N+L L
Sbjct: 266 VTTLKHVHLDNNRLNQL 282
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 162 (62.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
KF+ +FL+ + +V CP C C+ + C + +P ID T L L+
Sbjct: 3 KFLFYLFLIGI--AVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD 60
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
N + ++++ F M T++ L L + + F+ AF + N+ L L+ N L+ + + +
Sbjct: 61 NFVTNIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDM 118
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + L + L +N + ISS +F + +D+S + TI +A + + TL L
Sbjct: 119 FSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSL 178
Query: 182 NGNKLASLKPRTWS 195
+ N + ++ T+S
Sbjct: 179 DHNMIDNIPKGTFS 192
Score = 121 (47.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/164 (25%), Positives = 79/164 (48%)
Query: 35 KRTVEC-IDRNFYTIPEGIDLD--TQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
+RTVE + NF T + D T ++DL S N I+ + F + N++ L+L
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADL--RNLRALHLNS 108
Query: 90 CKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQ 147
+L + + F G++N+ L L++N L+ + S + + L+ ++L++N + I + +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + + + I I F + K+ L + NKL L P
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPP 212
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 162 (62.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
KF+ +FL+ + +V CP C C+ + C + +P ID T L L+
Sbjct: 3 KFLFYLFLIGI--AVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD 60
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
N + ++++ F M T++ L L + + F+ AF + N+ L L+ N L+ + + +
Sbjct: 61 NFVTNIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDM 118
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + L + L +N + ISS +F + +D+S + TI +A + + TL L
Sbjct: 119 FSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSL 178
Query: 182 NGNKLASLKPRTWS 195
+ N + ++ T+S
Sbjct: 179 DHNMIDNIPKGTFS 192
Score = 121 (47.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/164 (25%), Positives = 79/164 (48%)
Query: 35 KRTVEC-IDRNFYTIPEGIDLD--TQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
+RTVE + NF T + D T ++DL S N I+ + F + N++ L+L
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADL--RNLRALHLNS 108
Query: 90 CKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQ 147
+L + + F G++N+ L L++N L+ + S + + L+ ++L++N + I + +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + + + I I F + K+ L + NKL L P
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPP 212
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 163 (62.4 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 46/167 (27%), Positives = 86/167 (51%)
Query: 23 CPLGCSCKWKAGKRT-VECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP+ C C+ +AG V+C +R T+P G+D T LDLS N++ L +F +
Sbjct: 32 CPVPCRCR-EAGILLWVDCSERGLSTVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRF-- 88
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L +L + +AF G++++ L L +N L +P+ L +P L+S+ L N I
Sbjct: 89 LEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLIS 148
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ SF+ +R++ + + + I A + + + L N++
Sbjct: 149 LVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRI 195
Score = 154 (59.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 37/132 (28%), Positives = 73/132 (55%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L +N + + E ++ +Q L L + V DR+F G+T++ L L DN L
Sbjct: 114 KILMLQNNRLGGIPAEALWEL--PGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNAL 171
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L ++ L+++ LA N I ++ Y+F + + + + N +I + + +F G+
Sbjct: 172 TEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQ 231
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 232 NLETLDLNCNQL 243
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N +Q+ L+ G T+++ L L + L+ + + + + L+LS NL+ +P
Sbjct: 307 LSLNGATDIQEFPDLR-GTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHNLIEGLP 365
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
SL L+ I L HN I ++ + +F+ +R +D+S I +I+ EAF + + L
Sbjct: 366 SLRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLD 425
Query: 181 LNGNKLASL 189
L GN+L+ L
Sbjct: 426 LTGNQLSVL 434
>RGD|628861 [details] [associations]
symbol:Lrrc3 "leucine rich repeat containing 3" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:628861 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00390000003913 HOGENOM:HOG000073532
HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731 OMA:HCECALQ
OrthoDB:EOG48PMM1 EMBL:AB086432 IPI:IPI00199541 RefSeq:NP_663712.1
UniGene:Rn.83630 ProteinModelPortal:P59035
Ensembl:ENSRNOT00000001632 GeneID:246773 KEGG:rno:246773
UCSC:RGD:628861 InParanoid:P59035 NextBio:623859
Genevestigator:P59035 GermOnline:ENSRNOG00000001217 Uniprot:P59035
Length = 257
Score = 152 (58.6 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 52/179 (29%), Positives = 75/179 (41%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
ASCP C C AG V C R IP I +T +L L +N I+ + F +
Sbjct: 31 ASCPQSCQCPDHAGAVAVHCSSRGLQEIPRDIPANTVLLKLDANRISRVPNGAFQHL--P 88
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIH 139
+++L L +E + AF G+ + LDLS N + +P I L+HNP+H
Sbjct: 89 QLRELDLSHNAIEAIGPAAFSGLAGGLRLLDLSHNRIRRIPKDALGKLSAKIRLSHNPLH 148
Query: 140 -----QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
Q + + + P +D C HT E F G I L +G S +T
Sbjct: 149 CECALQEALWELKLDPDS--VDEIAC--HTSAQEQFVGKPLIQVLD-SGASFCSTHRKT 202
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 163 (62.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 47/173 (27%), Positives = 85/173 (49%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP C+C + V C +R +I E + + + L+ N I V+++ FL+
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRTDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF + N+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I + +F P ++ + ++N Q+ + S F G+ + L L GN SL
Sbjct: 492 LIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLL-RLNLRGNSFTSL 543
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 163 (62.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 48/173 (27%), Positives = 85/173 (49%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP C+C + V C +R +I E + + + L+ N I V+++ FL+
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRSDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF +TN+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I S +F P ++ + ++N + T+ S F G+ + L L N SL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLL-RLNLRSNHFTSL 543
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 163 (62.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 38/132 (28%), Positives = 69/132 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L + +N + + F M + +Q LYL+ + +D +G N++ LD+S+N L
Sbjct: 228 LRVQNNTLRRIHPMAF--MNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYA 285
Query: 119 VPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
+PSL +P LK + + N I +I + +F + P ++ I + N I I +F +DK+
Sbjct: 286 LPSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVV 345
Query: 179 LKLNGNKLASLK 190
L + N LA ++
Sbjct: 346 LLVGNNSLAKIE 357
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q++ + +NNI + + F + + L + L ++ F G+ N+ +L + +N L
Sbjct: 320 QLISVQNNNIVQISRNSF--ESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTL 377
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ + S + +L +++L HN IH I +F + ++D+SN +I + F
Sbjct: 378 TALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFK--K 435
Query: 175 KIDTLKLNGNKL 186
KI + L+GN+L
Sbjct: 436 KISNILLDGNQL 447
>ZFIN|ZDB-GENE-050522-43 [details] [associations]
symbol:vasna "vasorin a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 SMART:SM00181 ZFIN:ZDB-GENE-050522-43
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG084318 EMBL:AY838878 IPI:IPI01006442 UniGene:Dr.83310
ProteinModelPortal:Q3MKM9 IntAct:Q3MKM9 InParanoid:Q3MKM9
Uniprot:Q3MKM9
Length = 688
Score = 161 (61.7 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 42/147 (28%), Positives = 81/147 (55%)
Query: 48 IPEGI--DLDT-QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVT 104
IP+G+ L + LDLSSN I + K+ F+ G+ N+++LYL ++ + AF G+
Sbjct: 91 IPDGVFSPLSSLHNLDLSSNYITHISKDSFI--GLVNLERLYLYSNIIQNIHPAAFEGLE 148
Query: 105 NMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHT 164
N+ EL L N +S +P+L +P L ++L++N I + + Q TP + + ++ + +
Sbjct: 149 NLLELKLQGNQISVLPAL-QLPRLLHLDLSYNSIPPLVAQDLQ-TPHLESLKIAGLGLTS 206
Query: 165 IYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ E + + L ++ N+L ++P
Sbjct: 207 LDEELLGSLVNLHVLDVSQNQLVDIQP 233
Score = 156 (60.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/159 (25%), Positives = 76/159 (47%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+ LL LL + CP C+C + C+ RN +P G+ + L + N IN+
Sbjct: 10 LILLQLLCGCLSSRCPHDCTC---LPSNNIFCVQRNLIYMPRGLPSTGKQLYVFQNKINI 66
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIP 126
LQ++ F+++G ++ L L + L + D F ++++ LDLS N ++ + S I +
Sbjct: 67 LQQQDFVELG--ELEMLDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKDSFIGLV 124
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTI 165
L+ + L N I I +F+ + + + QI +
Sbjct: 125 NLERLYLYSNIIQNIHPAAFEGLENLLELKLQGNQISVL 163
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/138 (26%), Positives = 66/138 (47%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS N+I L + + +++ L + L +D+ + N+ LD+S N L
Sbjct: 174 LDLSYNSIPPLVAQ---DLQTPHLESLKIAGLGLTSLDEELLGSLVNLHVLDVSQNQLVD 230
Query: 119 V-PSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI-DKI 176
+ P+L + L+++NL NP+ + FQ+ + +D+SN + + E F+ + K+
Sbjct: 231 IQPTLKSMGGLRNLNLTGNPLGSLKHEDFQNLVNLLELDLSNLNLQG-FPEGFFNLFPKL 289
Query: 177 DTLKLNGNKLASLKPRTW 194
+ L N L P W
Sbjct: 290 EKLTAAENPFNCLCPLAW 307
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/166 (28%), Positives = 84/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 415 ACPEKCRCE---GT-TVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 468
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ L K+ +++ AF G + ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 469 QLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 528
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI T+ AF + + TL L N
Sbjct: 529 SCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 574
Score = 111 (44.1 bits), Expect = 0.00089, P = 0.00089
Identities = 28/125 (22%), Positives = 61/125 (48%)
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
N I+ +++ F + +++L L + L+ + F G + LDLS+N + +P
Sbjct: 3 NKISTIERGAF--QDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKA 60
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ +K++ L +N I I +F++ + + ++N I + +F + K+ T +L
Sbjct: 61 FRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRL 120
Query: 182 NGNKL 186
+ N L
Sbjct: 121 HSNNL 125
Score = 100 (40.3 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 29/101 (28%), Positives = 54/101 (53%)
Query: 44 NFYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAF 100
N PE + L T L DLS N I + ++ F G +I+ L L ++ ++D AF
Sbjct: 28 NLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAF--RGAVDIKNLQLDYNQISCIEDGAF 85
Query: 101 RGVTNMDELDLSDNLLS--TVPSLIYIPYLKSINLAHNPIH 139
R + +++ L L++N ++ +V S ++P L++ L N ++
Sbjct: 86 RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLY 126
Score = 92 (37.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ I L N I I +F +R +D+SN QI + +AF G+ +++L L GNK+
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 279
Query: 188 SLKPRT 193
L P++
Sbjct: 280 EL-PKS 284
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/168 (27%), Positives = 83/168 (49%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
+ +CP C C+ VEC IPE I T L L++N I++L+ +
Sbjct: 509 SDVACPHKCRCE----ASVVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKK- 563
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHN 136
+++++K+ L K+ ++D F G ++ EL L+ N L ++ S ++ + L+++ L +N
Sbjct: 564 LSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
I I + SF +R + + + I TI AF + + TL L N
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 43/170 (25%), Positives = 84/170 (49%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C G TV+C IP+ I +T+ L+L+ NNI + K F G+
Sbjct: 33 ACPALCTC---TGT-TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLKQ 86
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI--PYLKSINLAHNPIH 139
++ L L + ++ V+ AF + ++ L L+ N L +P L++ L ++L+ N +
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQ 146
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ +F+ ++ + + +I I AF + ++ L LN N + ++
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 110 (43.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 29/102 (28%), Positives = 58/102 (56%)
Query: 41 IDRN-FYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++RN +PE + + Q L DLS N + + ++ F G T+++ L L K ++ ++
Sbjct: 116 LNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAF--RGATDLKNLQLDKNRISCIE 173
Query: 97 DRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHN 136
+ AFR + ++ L L++N ++T+P S ++P L++ L N
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 215
Score = 58 (25.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 13/52 (25%), Positives = 31/52 (59%)
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
Q+S++ + ++ +D+SN +I ++ + +F + ++ TL L+ N L + P
Sbjct: 779 QLSTFKY-----LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 1 MCHKFILS-VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVL 59
M +LS VFL LL ++ A+CP C C + V C IP+ + T++L
Sbjct: 1 MARVLLLSLVFLAILLPAL--AACPQNCHCH--GDLQHVICDKVGLQKIPK-VSETTKLL 55
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
+L NN VL F + N+ L+L+ C + V AFRG+ + L LS N + +
Sbjct: 56 NLQRNNFPVLAANSFRT--VPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVL 113
Query: 120 PSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID 177
+ + + L + L HN + ++ + + ++N +I + + AF G +
Sbjct: 114 RAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 173
Query: 178 TLKLNGNKLASLKP 191
L L+ N L SL P
Sbjct: 174 WLYLSENALTSLHP 187
Score = 128 (50.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
+L L++N I L+ F G +++ LYL + L + + V N+ + L N LS
Sbjct: 150 ILQLNNNKIRELRAGAF--QGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLS 207
Query: 118 TVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYID---MSNCQIHTIYSEAFYG 172
+ PS L + ++ + L+HNP+ I +FQS G RY++ + N + AF G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSF-G-RYLETLWLDNTNLEKFSDAAFAG 265
Query: 173 IDKIDTLKLNGNKLASLKPRTW 194
+ + + L N+L L P T+
Sbjct: 266 VTTLKHVHLENNRLNQL-PSTF 286
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 9 VFLLTLLASVTQAS-CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
VF + + ++ +A CP C C+ + T+ C +P +D T L L+ N I
Sbjct: 5 VFCVLVFGALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTDNFIT 64
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYI 125
++++ FL M T++ L L + + + AF G+ ++ L + N LS + S L +
Sbjct: 65 AVRRKDFLNM--TSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLKGL 122
Query: 126 PYLKSINLAHNPIHQISSYSFQS-TPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
L+ + L +N IH I SF I +D+S + T+ EA + I+TL L+ N
Sbjct: 123 MNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLDHN 182
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/185 (29%), Positives = 87/185 (47%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
V LL L A+ A CP+ C+C + A TV C NF +P + TQ L L +N I
Sbjct: 14 VLLLLLAAAPAAARCPMLCTC-YPAPP-TVSCQANNFSAVPRALPPGTQRLFLQNNLIGA 71
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
L+ F G ++ L+L L + FR + ++ELDL DN L S P +
Sbjct: 72 LRPGSF---G-PSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGL 127
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS-NCQIHTIYSEAFYGIDKIDTLKLNGN 184
L+S++L + + F+ ++Y+ + N +H + + F + + L L+GN
Sbjct: 128 ERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVH-LQDDLFADLANLSHLFLHGN 186
Query: 185 KLASL 189
+L L
Sbjct: 187 RLRLL 191
Score = 118 (46.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 33/134 (24%), Positives = 67/134 (50%)
Query: 59 LDLSSN-NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
LDL N ++ L+ + F G+ +Q L+L +C+L + FRG+ ++ L L +N L
Sbjct: 108 LDLGDNRHLRSLEPDTF--QGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLV 165
Query: 118 TVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
+ ++ + L + L N + ++ + F+ + + + ++ ++ AF G+ +
Sbjct: 166 HLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGR 225
Query: 176 IDTLKLNGNKLASL 189
+ L L N LASL
Sbjct: 226 LTILYLFNNSLASL 239
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 57/185 (30%), Positives = 89/185 (48%)
Query: 11 LLTLLA--SVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
LLTLLA VT SCP+ C+C + TV C NF ++P + TQ L L +N I
Sbjct: 18 LLTLLALPPVTP-SCPMLCTCY--SSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRS 74
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-I 125
L+ F G N+ L+L L + FR + ++ELDL DN L S P +
Sbjct: 75 LRPGTF---G-PNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGL 130
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMS-NCQIHTIYSEAFYGIDKIDTLKLNGN 184
L+S++L + + F+ ++Y+ + N +H + + F + + L L+GN
Sbjct: 131 ERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLH-LQDDLFADLANLSHLFLHGN 189
Query: 185 KLASL 189
+L L
Sbjct: 190 RLRLL 194
Score = 125 (49.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/159 (24%), Positives = 75/159 (47%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVL---DLSSN-NINVLQKEIFLQMGITNIQKLYLRKCKL 92
T+ N TI G Q L DL N ++ L+ + F G+ +Q L+L +C+L
Sbjct: 86 TLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTF--QGLERLQSLHLYRCQL 143
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ FRG+ ++ L L +N L + ++ + L + L N + ++ + F+
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + ++ ++ AF+G+ ++ L L N LASL
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASL 242
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 11 LLTLLASVTQA-SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
LL LLA A SCP+ C+C + TV C NF ++P + TQ L L +N I L
Sbjct: 18 LLMLLALPLAAPSCPMLCTCY--SSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTL 75
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSLIY-IP 126
+ F G +N+ L+L L + FR + ++ELDL DN L S P +
Sbjct: 76 RPGTF---G-SNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLE 131
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMS-NCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L+S++L + + F+ ++Y+ + N +H + + F + + L L+GN+
Sbjct: 132 RLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLH-LQDDLFADLANLSHLFLHGNR 190
Query: 186 LASL 189
L L
Sbjct: 191 LRLL 194
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/159 (24%), Positives = 74/159 (46%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVL---DLSSN-NINVLQKEIFLQMGITNIQKLYLRKCKL 92
T+ N TI G Q L DL N ++ L+ + F G+ +Q L+L +C+L
Sbjct: 86 TLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTF--QGLERLQSLHLYRCQL 143
Query: 93 EFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP 150
+ FRG+ ++ L L +N L + ++ + L + L N + ++ + F+
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 151 GIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + + ++ ++ AF G+ ++ L L N LASL
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASL 242
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L SN + + E ++ ++Q L L + V +R+F G++++ L L DN L
Sbjct: 117 KILMLQSNQLRGIPAEALWEL--PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNAL 174
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L +P L+++ LA N I I Y+FQ+ + + + N +I + + +F G+
Sbjct: 175 TEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLH 234
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 235 NLETLDLNYNEL 246
Score = 148 (57.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ + +C + +P +D T LDLS NN+ LQ +F +
Sbjct: 34 ACPAPCHCQEDGIMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRF-- 91
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L L + +AF G+ ++ L L N L +P+ L +P L+S+ L N I
Sbjct: 92 LEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ SF+ +R++ + + + I A + + + L N++
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRI 198
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N I + F +T++ L+L +++ V +F G+ N++ LDL+ N L
Sbjct: 189 QAMTLALNRIRHIPDYAF--QNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL 246
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F P ++ I + I + AF + K
Sbjct: 247 QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSK 306
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 307 LHTLSLNG 314
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N +Q+ L+ G T+++ L L + + + + + + L+LS N + +P
Sbjct: 310 LSLNGATDIQEFPDLK-GTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELP 368
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
SL L+ I L HN I +I + +F ++ +D+S I I+ EAF + + L
Sbjct: 369 SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLD 428
Query: 181 LNGNKLASL 189
L N+L +L
Sbjct: 429 LTDNQLTTL 437
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L SN + + E ++ ++Q L L + V +R+F G++++ L L DN L
Sbjct: 117 KILMLQSNQLRGIPAEALWEL--PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNAL 174
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L +P L+++ LA N I I Y+FQ+ + + + N +I + + +F G+
Sbjct: 175 TEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLH 234
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 235 NLETLDLNYNEL 246
Score = 148 (57.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ + +C + +P +D T LDLS NN+ LQ +F +
Sbjct: 34 ACPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRF-- 91
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L L + +AF G+ ++ L L N L +P+ L +P L+S+ L N I
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID--TLKLN 182
+ SF+ +R++ + + + I A + + TL LN
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALN 196
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 35/128 (27%), Positives = 63/128 (49%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N+I + F +T++ L+L +++ V +F G+ N++ LDL+ N L
Sbjct: 189 QAMTLALNHIRHIPDYAF--QNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL 246
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F +P ++ I + I + AF + K
Sbjct: 247 QEFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSK 306
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 307 LHTLSLNG 314
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N +Q+ L+ G T+++ L L + + + + + + L+LS N + +P
Sbjct: 310 LSLNGATDIQEFPDLK-GTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELP 368
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
SL L+ I L HN I +I + +F ++ +D+S I I+ EAF + + L
Sbjct: 369 SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLD 428
Query: 181 LNGNKLASL 189
L N+L +L
Sbjct: 429 LTDNQLTTL 437
>UNIPROTKB|Q65Z91 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0021540
"corpus callosum morphogenesis" evidence=IEA] [GO:0021670 "lateral
ventricle development" evidence=IEA] [GO:0021960 "anterior
commissure morphogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007275 GO:GO:0005576
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:AB100033 EMBL:AB195969 IPI:IPI00682643
IPI:IPI00775744 RefSeq:NP_001005346.1 UniGene:Gga.43824
ProteinModelPortal:Q65Z91 STRING:Q65Z91 GeneID:419088
KEGG:gga:419088 CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643
InParanoid:Q65Z91 KO:K08130 OrthoDB:EOG4V171F NextBio:20822199
Uniprot:Q65Z91
Length = 369
Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 52/189 (27%), Positives = 83/189 (43%)
Query: 11 LLTLLASVTQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
LL L T +C GC C+ ++ V+C + +P I LDT LDLSS
Sbjct: 10 LLLLPCFSTTKTCFPGCHCEVESFGLFDSFSLTKVDCSGIGSHIVPVPIPLDTSYLDLSS 69
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
N + + + + G T + L L + + F + ++ LDLS N L +P
Sbjct: 70 NKLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDC 129
Query: 124 YIPY-LKSINLAHNPIHQISSYSFQSTPGIR--YIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+ L I+L++N + I+ F S + +D+SN + I I I L
Sbjct: 130 FSSSPLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLN 189
Query: 181 LNGNKLASL 189
L+GN+L S+
Sbjct: 190 LSGNRLTSV 198
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/139 (27%), Positives = 76/139 (54%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DLS+N ++ + + + I NIQ L L +L V + +G+ + L+L N L+
Sbjct: 164 VDLSNNMLSKITRNH--EKSIPNIQNLNLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAK 218
Query: 119 VPSLIYIPYLKSINLAHNPIH---QISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGID 174
+ + I+L+ + +H ++S YSF+ P ++ +D+SN + ++ +E +G++
Sbjct: 219 IEKGDFKGLKGLIHLSLSGLHDFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLN 278
Query: 175 KIDTLKLNGNKLASLKPRT 193
I L L+G ++SL P+T
Sbjct: 279 SIQELNLSGTGVSSL-PKT 296
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DLS+N + + ++F G + L L + + + N+ L+LS N L++
Sbjct: 138 IDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLNLSGNRLTS 197
Query: 119 VPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKID 177
VP+L IP L+ +NL NP+ +I F+ G+ ++ +S + +F + +
Sbjct: 198 VPNLQGIP-LRYLNLDGNPLAKIEKGDFKGLKGLIHLSLSGLHDFRELSPYSFKELPALQ 256
Query: 178 TLKLNGN-KLASL 189
L L+ N L SL
Sbjct: 257 VLDLSNNPNLRSL 269
>UNIPROTKB|F1NDH7 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 IPI:IPI00682643
OMA:LTRVDCS GeneTree:ENSGT00390000016740 EMBL:AADN02059345
ProteinModelPortal:F1NDH7 Ensembl:ENSGALT00000001106 Uniprot:F1NDH7
Length = 371
Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 52/189 (27%), Positives = 83/189 (43%)
Query: 11 LLTLLASVTQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
LL L T +C GC C+ ++ V+C + +P I LDT LDLSS
Sbjct: 10 LLLLPCFSTTKTCFPGCHCEVESFGLFDSFSLTKVDCSGIGSHIVPVPIPLDTSYLDLSS 69
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
N + + + + G T + L L + + F + ++ LDLS N L +P
Sbjct: 70 NKLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDC 129
Query: 124 YIPY-LKSINLAHNPIHQISSYSFQSTPGIR--YIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+ L I+L++N + I+ F S + +D+SN + I I I L
Sbjct: 130 FSSSPLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLN 189
Query: 181 LNGNKLASL 189
L+GN+L S+
Sbjct: 190 LSGNRLTSV 198
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/139 (27%), Positives = 76/139 (54%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DLS+N ++ + + + I NIQ L L +L V + +G+ + L+L N L+
Sbjct: 164 VDLSNNMLSKITRNH--EKSIPNIQNLNLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAK 218
Query: 119 VPSLIYIPYLKSINLAHNPIH---QISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGID 174
+ + I+L+ + +H ++S YSF+ P ++ +D+SN + ++ +E +G++
Sbjct: 219 IEKGDFKGLKGLIHLSLSGLHDFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLN 278
Query: 175 KIDTLKLNGNKLASLKPRT 193
I L L+G ++SL P+T
Sbjct: 279 SIQELNLSGTGVSSL-PKT 296
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
+DLS+N + + ++F G + L L + + + N+ L+LS N L++
Sbjct: 138 IDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLNLSGNRLTS 197
Query: 119 VPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ-IHTIYSEAFYGIDKID 177
VP+L IP L+ +NL NP+ +I F+ G+ ++ +S + +F + +
Sbjct: 198 VPNLQGIP-LRYLNLDGNPLAKIEKGDFKGLKGLIHLSLSGLHDFRELSPYSFKELPALQ 256
Query: 178 TLKLNGN-KLASL 189
L L+ N L SL
Sbjct: 257 VLDLSNNPNLRSL 269
>ZFIN|ZDB-GENE-030827-4 [details] [associations]
symbol:tpbga "trophoblast glycoprotein a"
species:7955 "Danio rerio" [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:2000052
"positive regulation of non-canonical Wnt receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030827-4 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0090090 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:Q9BZR6 GO:GO:2000052 CTD:100507050
HOVERGEN:HBG053843 EMBL:JN653073 EMBL:AB097825 IPI:IPI00508902
RefSeq:NP_919373.1 UniGene:Dr.25206 GeneID:373095 KEGG:dre:373095
InParanoid:Q7T2W3 NextBio:20813366 Uniprot:Q7T2W3
Length = 372
Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/200 (25%), Positives = 95/200 (47%)
Query: 8 SVFLLTLLASVTQAS---CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+V L L A+ A CP GC C A TV+C+ ++ IP GI T+ L ++ N
Sbjct: 8 AVVLGLLCAAAVSAGALVCPTGCECSEAA--LTVKCVSKDLRDIPSGIPGYTRNLFITGN 65
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLI 123
+I+ + E F G+ N+ L L ++ V F + ++ LDLS+N L+ + P
Sbjct: 66 HISQIGPESF--QGLENVTNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAF 123
Query: 124 YIP--YLKSINLA-----HNPIHQIS-SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
+ L+ +NL+ H+ + ++ S + S + +D+ + + + S F +
Sbjct: 124 TVQSRMLRELNLSRALYNHSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLVG 183
Query: 176 IDTLKLNGNKLASLKPRTWS 195
+ L+L N + S+ T++
Sbjct: 184 LRRLQLGNNSIVSIHNGTFT 203
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP CSC + V C +R +I E + + + L+ N I V+++ FL+
Sbjct: 374 CPTACSCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF +TN+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I S +F P ++ + ++N + + S F G+ + L L N SL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLL-RLNLRSNHFTSL 543
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP C+C + V C +R +I E + + + L+ N I V+++ FL+
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRTDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF + N+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I S +F P ++ + ++N Q+ + S F G+ + L L N SL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLL-RLNLRSNSFTSL 543
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L +N + + E ++ ++Q L L + V +R+F G++++ L L DN L
Sbjct: 117 KILMLQNNQLGGIPAEALWEL--PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNAL 174
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L +P L+++ LA N I I Y+FQ+ + + + N +I + + +F G+
Sbjct: 175 TEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLH 234
Query: 175 KIDTLKLNGNKL 186
++TL LN NKL
Sbjct: 235 NLETLDLNYNKL 246
Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/170 (24%), Positives = 81/170 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ + +C + +P +D T LDLS NN+ LQ +F +
Sbjct: 34 ACPAPCHCQEDGIMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRF-- 91
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L L + +AF G+ ++ L L +N L +P+ L +P L+S+ L N I
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 151
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + I A + + + L N+++ +
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 201
Score = 121 (47.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N I+ + F +T++ L+L +++ + +F G+ N++ LDL+ N L
Sbjct: 189 QAMTLALNRISHIPDYAF--QNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKL 246
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F P ++ I + I + AF + K
Sbjct: 247 QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPK 306
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 307 LHTLSLNG 314
Score = 121 (47.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N +Q+ L+ G T+++ L L + + + + + + L+LS N + +P
Sbjct: 310 LSLNGAMDIQEFPDLK-GTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELP 368
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
SL L+ I L HN I +I + +F ++ +D+S I +I+ EAF + + L
Sbjct: 369 SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLD 428
Query: 181 LNGNKLASL 189
L N+L +L
Sbjct: 429 LTDNQLTTL 437
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 160 (61.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/168 (25%), Positives = 81/168 (48%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ + +C +R +P + T LDLS NN+ LQ +F +
Sbjct: 33 ACPAPCRCQEDGFMLSADCSERGLSAVPGDLHPLTAYLDLSMNNLTELQPGLFRHLSF-- 90
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L L + +AF G+ ++ L L +N L +P+ L +P L+S+ L N I
Sbjct: 91 LEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 150
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA 187
+ SF+ P +R++ + + + + A + + + L N+++
Sbjct: 151 LVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRIS 198
Score = 150 (57.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L +N + + E ++ ++Q L L + V D +F G+ + L L DN L
Sbjct: 116 KILMLQNNQLGGIPAEALWEL--PSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNAL 173
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ VP +L +P L+++ LA N I + Y+FQ+ + + + N +I + + +F G+
Sbjct: 174 TEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLH 233
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 234 SLETLDLNHNEL 245
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS N + +Q+ L+ G T+++ L L + L+ + + + + L+LS N + +P
Sbjct: 309 LSLNGASDIQEFPDLK-GTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGLP 367
Query: 121 SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
SL L+ I L HN I +I + +F ++ +D+S I +I+ EAF + + L
Sbjct: 368 SLHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLD 427
Query: 181 LNGNKLASL 189
L N+L L
Sbjct: 428 LTHNQLTML 436
>UNIPROTKB|H3BNZ6 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000561740
Bgee:H3BNZ6 Uniprot:H3BNZ6
Length = 138
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 8 SVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
+++L+ L V SCP C+C K + +C + +PEG+ + L LS+N I
Sbjct: 6 ALWLVWALLGVA-GSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKIT 64
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYI 125
VL++ F +T + L+L ++ V+ A ++ + LDLS N +S+ P L +
Sbjct: 65 VLRRGAFAD--VTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNL 122
Query: 126 PYLKSINLAHN 136
L+ + + HN
Sbjct: 123 SALQLLKMNHN 133
>ZFIN|ZDB-GENE-050320-95 [details] [associations]
symbol:islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:7955 "Danio rerio" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-050320-95 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57611 HOGENOM:HOG000113108 HOVERGEN:HBG100863 EMBL:BC090831
IPI:IPI00510044 RefSeq:NP_001013541.1 UniGene:Dr.120799
ProteinModelPortal:Q5BL20 IntAct:Q5BL20 STRING:Q5BL20 GeneID:541396
KEGG:dre:541396 InParanoid:Q5BL20 NextBio:20879208
ArrayExpress:Q5BL20 Uniprot:Q5BL20
Length = 712
Score = 158 (60.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 44/186 (23%), Positives = 87/186 (46%)
Query: 1 MCHKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLD 60
M K+++ + L T L CP C+C K + V+C ++ +P G+ + L
Sbjct: 1 MATKYLMLIALGTALIGNAHC-CPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLS 59
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
LS+N I VL+ + F+ +T + L+L ++ V+ + + LD+S+N + P
Sbjct: 60 LSANKIKVLKSKTFVN--VTQVTSLWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFP 117
Query: 121 --SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
L + L+ + + +N + I +F + +R I ++N + TI F + +
Sbjct: 118 WEDLANLGALQLLKMNNNEMVSIPKNAFSNLKDLRSIRINNNKFTTIVQGTFDSLAAMSH 177
Query: 179 LKLNGN 184
L++ N
Sbjct: 178 LQIFHN 183
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 156 (60.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 6 ILSVFLLTLLASVTQAS--CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+L + LL LL + + CP C C + A TVEC +P GI TQ L L
Sbjct: 12 LLGLLLLPLLPGLPPRATGCPAACRC-YSA---TVECGALRLRVVPPGIPPGTQTLFLQD 67
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--S 121
N+I L++ + ++ LYL L ++ AFR + EL L+ N L + +
Sbjct: 68 NSIAHLEQGSLAPLAA--LRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGA 125
Query: 122 LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + L+ + LA N + ++ ++F P ++ + + I + +A G+ + L L
Sbjct: 126 FVGLVQLRVLYLAGNQLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDL 185
Query: 182 NGNKLASL 189
+ N+L ++
Sbjct: 186 SRNQLGTI 193
>UNIPROTKB|A7E318 [details] [associations]
symbol:TSKU "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 CTD:25987
HOGENOM:HOG000001578 KO:K08130 OrthoDB:EOG4V171F
GeneTree:ENSGT00390000016740 EMBL:DAAA02041106 EMBL:BC151665
IPI:IPI00826776 RefSeq:NP_001096738.1 UniGene:Bt.10688
Ensembl:ENSBTAT00000002011 GeneID:529661 KEGG:bta:529661
eggNOG:NOG252644 InParanoid:A7E318 NextBio:20875079 Uniprot:A7E318
Length = 344
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 57/201 (28%), Positives = 92/201 (45%)
Query: 6 ILSVFLLTLLASV---TQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLD 55
+L + LL LLA+ T C GC C+ + V C + +P I LD
Sbjct: 5 LLPLLLLLLLAASGAQTTRPCFPGCQCEVETFGLFDSFSLTRVGCSGLGPHIVPVPIPLD 64
Query: 56 TQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL 115
T LDLSSN + + + + G T + L L L + AF + ++ LDLS N
Sbjct: 65 TAHLDLSSNRLETVNESVLAGPGYTTLSGLDLSYNLLTSLSPTAFSRLRYLESLDLSHNG 124
Query: 116 LSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIR--YIDMSNCQIHTIY---SE 168
L+ +P S P L +NL+HN + ++S +F + R ++D+S+ + + S
Sbjct: 125 LAALPTGSFTSSP-LSDVNLSHNRLREVSVSAFATHSQGRALHVDLSHNLLQRLLPHSSR 183
Query: 169 AFYGIDKIDTLKLNGNKLASL 189
A I +L L N+L ++
Sbjct: 184 AGQPAPTIQSLNLAWNRLRAV 204
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/190 (24%), Positives = 90/190 (47%)
Query: 9 VFLLTLLASVTQAS-CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNIN 67
+F L L+ +A CP C C+ + C + +P ID T L L+ N +
Sbjct: 5 LFYLFLIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVT 64
Query: 68 VLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--I 125
++++ F M T++ L L + + F+ AF + N+ L L+ N L+ + + ++ +
Sbjct: 65 NIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGL 122
Query: 126 PYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNK 185
L + L +N + ISS +F + +D+S + TI +A + + TL L+ N
Sbjct: 123 SNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNM 182
Query: 186 LASLKPRTWS 195
+ ++ T+S
Sbjct: 183 IDNIPKGTFS 192
Score = 121 (47.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/164 (25%), Positives = 79/164 (48%)
Query: 35 KRTVEC-IDRNFYTIPEGIDLD--TQVLDL--SSNNINVLQKEIFLQMGITNIQKLYLRK 89
+RTVE + NF T + D T ++DL S N I+ + F + N++ L+L
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADL--RNLRALHLNS 108
Query: 90 CKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQ 147
+L + + F G++N+ L L++N L+ + S + + L+ ++L++N + I + +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 148 STPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + + + I I F + K+ L + NKL L P
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPP 212
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 152 (58.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 6 ILSVFLLT-LLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+LS+ LL LL ++ A+CP C C + + V C IP+ + T++L+L N
Sbjct: 7 LLSLGLLAGLLPAL--AACPQNCHCH--SDLQHVICDKVGLQKIPK-VSEKTKLLNLQRN 61
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
N VL F M N+ L+L+ C++ V AFRG+ + L LS N + + + +
Sbjct: 62 NFPVLAANSFRAM--PNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAF 119
Query: 125 --IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
+ L + L HN + ++ + + ++N +I + + AF G + L L+
Sbjct: 120 DDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLS 179
Query: 183 GNKLASLKP 191
N L+SL+P
Sbjct: 180 ENALSSLQP 188
Score = 131 (51.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 41 IDRNFYT-IPEGID---LDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+D N T +P G+ ++ +L L++N I L+ F G +++ LYL + L +
Sbjct: 130 LDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAF--QGAKDLRWLYLSENALSSLQ 187
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
A V N+ + + N LS+ PS L + ++ + L+HNP+ I +FQS G RY
Sbjct: 188 PGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSF-G-RY 245
Query: 155 ID---MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ + N + AF G+ + + L N+L L
Sbjct: 246 LETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQL 283
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 154 (59.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 40 CIDRNFYTIP---EGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
C NF IP G++ T V L N I + LQ G+T ++ L L+ ++ V
Sbjct: 159 CFQNNFRRIPGAIRGMENLTHVY-LERNRIEAVAYNS-LQ-GLTKLKYLNLQDNRINVVH 215
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+RAF+G M+ L L+DNL+S +P + + LK +NL N + +S+ F+ +
Sbjct: 216 ERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEV 275
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ + +I+ I AF + + +L LN N L +L
Sbjct: 276 LYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTL 310
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 155 (59.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+ +L L V+ +CP C C+ C + P+G+D L L N+I+
Sbjct: 21 ISMLLCLPPVSCTTCPQKCRCE----DLQFYCDTQGLLAPPDGVDKGALGLSLRHNSISE 76
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIP 126
L + F G T + L+L ++ V + AF+G+ + +L+LS N ++ +P+ I++
Sbjct: 77 LSSDQFF--GFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLI 134
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L+ ++L+ N + + F ++ + + + + T AF+ ++ L L+ N+L
Sbjct: 135 NLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRL 194
Query: 187 ASL 189
SL
Sbjct: 195 RSL 197
Score = 130 (50.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/143 (25%), Positives = 73/143 (51%)
Query: 54 LDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSD 113
++ Q+LDLS N + L+ E+F G+ +Q L+LR L RAF +++ L LS+
Sbjct: 134 INLQILDLSFNQMTALEPELF--HGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSN 191
Query: 114 NLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY 171
N L ++ + L+ ++L HN + +I+ F ++++ + +I+ + S +
Sbjct: 192 NRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLTSTMEW 251
Query: 172 GIDKIDTLKLNGNKLASLKPRTW 194
++ L L GN++ L P +
Sbjct: 252 KWTTLEKLDLTGNEIRVLIPEVF 274
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 154 (59.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 38/140 (27%), Positives = 80/140 (57%)
Query: 51 GIDLDTQVLDLSSNNI-NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDEL 109
G++ + L+L N++ N+ QK + + ++ ++KL +++ K+ + + F G+ ++D L
Sbjct: 199 GLEDHIKRLNLGGNDLTNIPQKALSI---LSTLKKLEIQENKIRTISEGDFEGLQSLDSL 255
Query: 110 DLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTP-GIRYIDMSNCQIHTIY 166
L+ N+++TVP+ ++ + L S+ L N I I +F+ ++Y+ + + QIHTI
Sbjct: 256 ILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIP 315
Query: 167 SEAFYGIDKIDTLKLNGNKL 186
SEA + ++ L L N +
Sbjct: 316 SEALRPLHRLRHLDLRNNNI 335
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGV-TNMDELDLSDNLLS 117
L L NN+ LQ +FL + +I+ L + L +++ A + + +LD+S N +
Sbjct: 86 LKLRHNNLPKLQGFVFLAL---DIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMK 142
Query: 118 TVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI-D 174
TVPS L ++ +L +NL HN I I + +F+ + + + +I I EAF G+ D
Sbjct: 143 TVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLED 202
Query: 175 KIDTLKLNGNKLASLKPRTWS 195
I L L GN L ++ + S
Sbjct: 203 HIKRLNLGGNDLTNIPQKALS 223
Score = 140 (54.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/133 (27%), Positives = 71/133 (53%)
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLL 116
+L+L+ N I V+ F G+ ++ L L + K+ +D AFRG+ + + L+L N L
Sbjct: 157 ILNLNHNKITVIHNNAF--EGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDL 214
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L + LK + + N I IS F+ + + +++ I T+ + F +
Sbjct: 215 TNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLT 274
Query: 175 KIDTLKLNGNKLA 187
+++L+L GNK++
Sbjct: 275 LLNSLELEGNKIS 287
Score = 136 (52.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 36 RTVECIDRNFYTIPEGIDLDTQVLD---LSSNNINVLQKEIFLQMGITNIQKLYLRKCKL 92
+ +E + TI EG Q LD L+ N I + +F + + N L L K+
Sbjct: 229 KKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLN--SLELEGNKI 286
Query: 93 EFVDDRAFRGVT-NMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYSFQST 149
+D AF+G+ N+ L L DN + T+PS P L+ ++L +N I+ ++ +F
Sbjct: 287 SVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGF 346
Query: 150 -PGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ ++++ I + S F ++ ++TL L NKL
Sbjct: 347 GDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKL 384
>MGI|MGI:1349645 [details] [associations]
symbol:Islr "immunoglobulin superfamily containing
leucine-rich repeat" species:10090 "Mus musculus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1349645
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HSSP:P07359
eggNOG:NOG240332 OrthoDB:EOG4QC14W GeneTree:ENSGT00700000104028
CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG
EMBL:AB024538 EMBL:AB024539 EMBL:BC006602 IPI:IPI00123635
RefSeq:NP_001182360.1 RefSeq:NP_036173.1 UniGene:Mm.367887
ProteinModelPortal:Q6GU68 SMR:Q6GU68 STRING:Q6GU68 PRIDE:Q6GU68
Ensembl:ENSMUST00000041477 Ensembl:ENSMUST00000168864 GeneID:26968
KEGG:mmu:26968 UCSC:uc009pwk.2 InParanoid:Q6GU68 NextBio:304907
Bgee:Q6GU68 Genevestigator:Q6GU68 Uniprot:Q6GU68
Length = 428
Score = 153 (58.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L + +L ++ +A CP C C K G + +C R+ +P G + L LS+N +
Sbjct: 4 LCLLCWAVLLNLVRA-CPEPCDCGEKYGFQIADCAYRDLEGVPPGFPANVTTLSLSANRL 62
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIY 124
L + F ++ + +Q L+L ++ V A ++++ LDLS NLLS L
Sbjct: 63 PGLPEGAFREVPL--LQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHN 120
Query: 125 IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ L+ + + N + I +F S +R + +++ ++H + F + + L++N N
Sbjct: 121 LSALQLLKMDSNELAFIPRDAFSSLSALRSLQLNHNRLHALAEGTFAPLTALSHLQINDN 180
Score = 109 (43.4 bits), Expect = 0.00082, P = 0.00082
Identities = 30/117 (25%), Positives = 63/117 (53%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPI 138
N+ L L +L + + AFR V + L L+ N + +V +L + +LKS++L+HN +
Sbjct: 51 NVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLL 110
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ + + ++ + M + ++ I +AF + + +L+LN N+L +L T++
Sbjct: 111 SEFAWSDLHNLSALQLLKMDSNELAFIPRDAFSSLSALRSLQLNHNRLHALAEGTFA 167
>WB|WBGene00008977 [details] [associations]
symbol:iglr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GeneTree:ENSGT00690000102197 eggNOG:NOG294135
EMBL:Z78542 PIR:T21148 RefSeq:NP_510491.2 ProteinModelPortal:Q93539
SMR:Q93539 EnsemblMetazoa:F20D1.7 GeneID:184720
KEGG:cel:CELE_F20D1.7 UCSC:F20D1.7 CTD:184720 WormBase:F20D1.7
HOGENOM:HOG000018298 InParanoid:Q93539 OMA:SIHIRSI NextBio:925764
Uniprot:Q93539
Length = 695
Score = 156 (60.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 42/142 (29%), Positives = 74/142 (52%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++LDLS NN+ L F ++++L LR+ K+E ++ + ++ LDLS NLL
Sbjct: 177 KMLDLSGNNMTRLVTSDFTSA--VSLRELILRENKIELIETDTTEPMQQLETLDLSGNLL 234
Query: 117 STV--PSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
S V + +L S+NL+ NP+ QI F P ++ + + NC I + + AF +
Sbjct: 235 SEVRLEAQQNFRHLFSLNLSCNPL-QIIREGFLQLPDLQVLQLDNCNISVVEAGAFVSLP 293
Query: 175 KIDTLKLNGN-KLASLKPRTWS 195
++ ++ + N LA P +S
Sbjct: 294 RLHSMDIKDNPNLAYFSPYAFS 315
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS-LIYIPYLKSINLAHNPIHQ 140
+Q L+ + C L+ +A +T++ ELDLSDN+L + + I+I ++ + L +N I
Sbjct: 106 LQTLHFKNCSLKTFP-KALMALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKS 164
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
I + F+ P ++ +D+S + + + F + L L NK+ ++ T
Sbjct: 165 IGVHVFRYMPTLKMLDLSGNNMTRLVTSDFTSAVSLRELILRENKIELIETDT 217
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/128 (28%), Positives = 68/128 (53%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L +N++ + E LQ + ++Q L L + +V F G+ ++ L L DN L+ +P
Sbjct: 2 LQNNHLRQVPTEA-LQ-NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIP 59
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
+ + L+++ LA N IH I Y+F + + + + N +IH++ + F G+ ++T
Sbjct: 60 VQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLET 119
Query: 179 LKLNGNKL 186
L LN N L
Sbjct: 120 LDLNYNNL 127
Score = 105 (42.0 bits), Expect = 0.00058, P = 0.00058
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N I+ + F ++++ L+L ++ + + F G+ +++ LDL+ N L
Sbjct: 70 QAMTLALNKIHHIPDYAF--GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 127
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P+ I + LK + N I I +F P + I + I + AF + +
Sbjct: 128 DEFPTAIRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPE 187
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 188 LRTLTLNG 195
>UNIPROTKB|Q9BY71 [details] [associations]
symbol:LRRC3 "Leucine-rich repeat-containing protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543
eggNOG:NOG318731 OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:AB058646
EMBL:AY061857 EMBL:AY358120 EMBL:BC119648 EMBL:BC119649
IPI:IPI00008377 RefSeq:NP_112153.1 UniGene:Hs.326579
ProteinModelPortal:Q9BY71 SMR:Q9BY71 IntAct:Q9BY71
MINT:MINT-7242320 PhosphoSite:Q9BY71 DMDM:18202742 PaxDb:Q9BY71
PRIDE:Q9BY71 Ensembl:ENST00000291592 GeneID:81543 KEGG:hsa:81543
UCSC:uc002zfa.3 GeneCards:GC21P045875 HGNC:HGNC:14965 HPA:HPA017975
neXtProt:NX_Q9BY71 PharmGKB:PA30462 InParanoid:Q9BY71
PhylomeDB:Q9BY71 GenomeRNAi:81543 NextBio:71777 ArrayExpress:Q9BY71
Bgee:Q9BY71 CleanEx:HS_LRRC3 Genevestigator:Q9BY71
GermOnline:ENSG00000160233 Uniprot:Q9BY71
Length = 257
Score = 147 (56.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 52/179 (29%), Positives = 76/179 (42%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A+CP C C AG V C R +PE I +T +L L +N I+ L F +
Sbjct: 31 AACPQPCRCPDHAGAVAVFCSLRGLQEVPEDIPANTVLLKLDANKISHLPDGAFQHLH-- 88
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIH 139
+++L L +E + F G+ + LDLS N + +P I L+HNP+H
Sbjct: 89 RLRELDLSHNAIEAIGSATFAGLAGGLRLLDLSYNRIQRIPKDALGKLSAKIRLSHNPLH 148
Query: 140 -----QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
Q + + + P +D C HT E F G + L G L S+ RT
Sbjct: 149 CECALQEALWELKLDPDS--VDEIAC--HTSVQEEFVGKPLVQALDA-GASLCSVPHRT 202
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 157 (60.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 40/134 (29%), Positives = 70/134 (52%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+T + L L DN
Sbjct: 41 ELKVLTLQNNQLKTVPSEAI--RGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDN 98
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L+ VP L +P L+++ LA N I I ++F + + + + N +I ++ F G
Sbjct: 99 SLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG 158
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 159 LDNLETLDLNYNNL 172
Score = 135 (52.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + + + LDLS N + +PS L+ I+L N
Sbjct: 252 GTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFNGCYALEEISLQRNQ 311
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
IHQI +FQ +R +D+S IH I+ AF + I L ++ N+L S
Sbjct: 312 IHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTS 362
Score = 120 (47.3 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ N I+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 115 QALTLALNKISSIPDFAFTNL--SSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 172
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 173 GEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSD 232
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G + P
Sbjct: 233 LHSLVIRGASMVQRFP 248
>ZFIN|ZDB-GENE-030131-1988 [details] [associations]
symbol:flrt3 "fibronectin leucine rich
transmembrane 3" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-1988 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000290188 HOVERGEN:HBG051629 KO:K16362
CTD:23767 OMA:SPYRVCM GeneTree:ENSGT00700000104442 EMBL:BX465200
IPI:IPI00876770 RefSeq:NP_001243575.1 UniGene:Dr.105122
Ensembl:ENSDART00000112985 Ensembl:ENSDART00000143703 GeneID:558864
KEGG:dre:558864 NextBio:20882668 Uniprot:B8A507
Length = 649
Score = 155 (59.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/192 (29%), Positives = 96/192 (50%)
Query: 5 FILSVFLLTLLAS--VTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
F + LL LA+ +T ASCP C C G + C DR+ +IP GI D VL L
Sbjct: 11 FFIRAGLLLGLANPLMTSASCPSQCRCD---GT-FIYCNDRDLTSIPSGIPEDATVLFLQ 66
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP-- 120
+N I L+ + ++K+YL C +D+ N+ EL L +N + T+
Sbjct: 67 NNRIKSAGIPTDLRR-LNGVEKIYLY-CNN--LDEFPTNLPLNVKELHLQENNIRTITHA 122
Query: 121 SLIYIPYLKSINLAHNPIHQIS--SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK-ID 177
SL IP+++ ++L N + +S +F+ + +R + +S + TI S G+ I+
Sbjct: 123 SLAQIPFIEELHLDDNSVSAVSIEEGAFRDSNHLRLLFLSRNHLSTIPS----GLPMTIE 178
Query: 178 TLKLNGNKLASL 189
L+ + N+++S+
Sbjct: 179 ELRFDDNRISSI 190
>RGD|1308398 [details] [associations]
symbol:Lrrc26 "leucine rich repeat containing 26" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=ISO;ISS] [GO:0015459 "potassium channel
regulator activity" evidence=ISO;ISS] InterPro:IPR001611
PROSITE:PS51450 RGD:1308398 GO:GO:0005737 GO:GO:0005856
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008076 GO:GO:0015459 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 HSSP:P07359 CTD:389816 eggNOG:NOG235918
HOGENOM:HOG000113367 HOVERGEN:HBG096585 OMA:DAAFSHC
OrthoDB:EOG4V438G GeneTree:ENSGT00700000104083 EMBL:BC061729
IPI:IPI00421581 RefSeq:NP_001014075.1 UniGene:Rn.154622
ProteinModelPortal:Q6P7C4 PRIDE:Q6P7C4 Ensembl:ENSRNOT00000015242
GeneID:311803 KEGG:rno:311803 UCSC:RGD:1308398 InParanoid:Q6P7C4
NextBio:664209 Genevestigator:Q6P7C4 Uniprot:Q6P7C4
Length = 334
Score = 150 (57.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 49/178 (27%), Positives = 78/178 (43%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
CP CSC GK C +P G+ + L L N ++ L F G +
Sbjct: 47 CPEACSCS-PGGK--ANCSALALPAVPAGLSWQVRSLLLDRNRVSTLPPGAFADAGA--L 101
Query: 83 QKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQ 140
L LR+ +L V RAF G+ + LDLS N L T+ + P L ++LA N +
Sbjct: 102 LYLVLRENRLRSVHARAFWGLGVLQRLDLSSNQLETLSPGTFTPLRALSFLSLAGNRLAL 161
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLA---SLKPR-TW 194
+ P +R + + + + + + + +D L+L+GN A +L+P TW
Sbjct: 162 LEPSILGPLPLLRVLSLQDNSLSALEAGLLNSLPALDVLRLHGNPWACSCALRPLCTW 219
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 41/186 (22%), Positives = 90/186 (48%)
Query: 4 KFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
+ + +F L L+ + SCP C C + K TV C + ++IP I + +Q + L S
Sbjct: 10 RLLCLMFWLNLVPVIN--SCPAKCVC-YSEPKATVACQQQGLFSIPTEIPVRSQRIFLQS 66
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTVPSL 122
N + V++ F + N+ L++ + ++ AF G+ ++ELD+ DN L +
Sbjct: 67 NKLTVVRSTSF--SSVHNLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPT 124
Query: 123 IY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
+ + L +++L + ++ F+ ++Y+ + + + ++ + F + + L
Sbjct: 125 AFRGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLF 184
Query: 181 LNGNKL 186
L+ NK+
Sbjct: 185 LHNNKI 190
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 159 (61.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L F+ LL + A+CP C C RTV C+ + +P+ I DT LDL N
Sbjct: 1 MLICFIFILLIPES-ATCPAECVCV----DRTVSCVGQQLTEVPQNIPNDTIRLDLQDNE 55
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI 125
I + F + N++ L L ++ + +++F + + +L LS N + +P ++
Sbjct: 56 ITKIGPNDF--SSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQ 113
Query: 126 PYLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
LK ++L+ N I +S Q + +++ I + + ++ L LNG
Sbjct: 114 NNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNG 173
Query: 184 NKLASLK 190
N+L + +
Sbjct: 174 NRLTTFE 180
Score = 138 (53.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 44/136 (32%), Positives = 68/136 (50%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGID-LDTQVLDLSSNNINVLQKEIFLQMGITN 81
CP C C G TV+C R TIP I TQ+L LS NNI+ + + + + N
Sbjct: 485 CPTQCDCY---GT-TVDCNKRGLNTIPTSIPRFATQLL-LSGNNISTVDLNSNIHV-LEN 538
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIH 139
++ L L + F++D++F ++ + EL L+DN L S++ L+ ++L+ N I
Sbjct: 539 LEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQ 598
Query: 140 QISSYSFQSTPGIRYI 155
SS F IR I
Sbjct: 599 CFSSIFFNKATRIREI 614
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 19 TQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMG 78
T CPL C+C G TV+C D +P + T + L N I+ + F
Sbjct: 256 TAEICPLPCTC---TGT-TVDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSF--KN 309
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHN 136
+ N+ +L L K + + +AF G+ N+ L L N ++ + S + + L+ + L N
Sbjct: 310 LKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNAN 369
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ I +F P + + + + I +I F + + TL L N L
Sbjct: 370 QLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 24 PLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQ 83
P C C+ + ++ +E + T+ L+L ++I +LQ + G N +
Sbjct: 196 PWNCDCRLRWMRKWLEKAEGQNKTVC------ATPLNLQGSSIEILQDKFMTCSG--NRK 247
Query: 84 KLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISS 143
+ Y + C E + +D D+ L+ VP+ + P I L N I I S
Sbjct: 248 RRYKKTC--ETAEICPLPCTCTGTTVDCRDSGLTYVPTNLP-PSTTEIRLEQNQISSIPS 304
Query: 144 YSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+SF++ + +D+S I I +AF G+ + TL L GN + LK T+
Sbjct: 305 HSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTF 355
>UNIPROTKB|E1BY98 [details] [associations]
symbol:E1BY98 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008076 "voltage-gated potassium channel
complex" evidence=IEA] [GO:0015459 "potassium channel regulator
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008076 GO:GO:0015459 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104083 EMBL:AADN02026958
IPI:IPI00573629 Ensembl:ENSGALT00000014472 OMA:NCIHIAS
Uniprot:E1BY98
Length = 250
Score = 146 (56.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 11 LLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ 70
+L LL + +CP C C W AG V+C R + +P + + L L N I VL
Sbjct: 13 VLLLLRPLPAPACPHTCHC-W-AGD--VDCRQRALHEVPPLLPTNASTLWLGYNLIAVLG 68
Query: 71 KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--L 128
F + + + +L L +LE + +A G+ + ELDLSDN LS + ++P L
Sbjct: 69 ARAFPSLPV--LLRLSLPHNRLEKIHRQALLGLRELQELDLSDNYLSVLNPETFLPLTSL 126
Query: 129 KSINLAHNPIHQISSYSFQSTPGIRYI 155
+NL +N + ++ + + P ++ I
Sbjct: 127 SMLNLGYNRLEELEAGVLHALPQLQAI 153
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 157 (60.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+ L LS N I L F G+ ++++L L C + +D +F N++ LDL DN +
Sbjct: 443 EFLSLSRNPITELNNLAF--SGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 500
Query: 117 STVPSLIYIPYLK--SINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
T+ + P K ++ L+HN + + S +F G+RY+D+ + + F G++
Sbjct: 501 RTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLE 560
Query: 175 KIDTLKLNGNKLASLKPRT 193
K+ LKL NK+ RT
Sbjct: 561 KLLVLKLGFNKITYETTRT 579
Score = 154 (59.3 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 38/139 (27%), Positives = 73/139 (52%)
Query: 59 LDLSSNNINV-LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
LDL N+ V L F + ++Q+L L KC+L F+ ++ + + N+ LDLS N
Sbjct: 372 LDLGQNSDLVHLNDSEF--NALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFK 429
Query: 118 TVPSLIYIPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
+ P + P L+ ++L+ NPI ++++ +F ++ ++++ C I TI +F
Sbjct: 430 SFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPN 489
Query: 176 IDTLKLNGNKLASLKPRTW 194
++ L L N + +L T+
Sbjct: 490 LEVLDLGDNNIRTLNHGTF 508
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L+L+ ++ + + + + N+ L L K + D AF + ++ L LS N +
Sbjct: 395 QRLNLNKCQLSFISNKTW--SSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPI 452
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ + +L + + LK +NLA I I YSF P + +D+ + I T+ F +
Sbjct: 453 TELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLK 512
Query: 175 KIDTLKLNGNKLASLKPRTWS 195
K+ TL L+ N+L ++ +S
Sbjct: 513 KLHTLILSHNRLEIMESNAFS 533
>UNIPROTKB|F1RSS8 [details] [associations]
symbol:LOC100623179 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00650000093266
OMA:KILCCAD EMBL:CU463217 ProteinModelPortal:F1RSS8
Ensembl:ENSSSCT00000010231 Uniprot:F1RSS8
Length = 588
Score = 154 (59.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDL N I L FL G + L+L + +++ V ++ F + N+ ELDLS NL+
Sbjct: 96 LDLEGNGIKHLTNSTFLSCGSLTV--LFLPRNQIDIVPEKTFSSLKNLGELDLSSNLIME 153
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P I+ + L+ +NL+ NP+ + F+S ++ +D+ +I +I + F + +
Sbjct: 154 LPPHIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIASISTRMFQPMKNL 213
Query: 177 DTLKLNGNKLASLKP 191
+ + S P
Sbjct: 214 SHIYFKNFRYCSYAP 228
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 155 (59.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 38/132 (28%), Positives = 73/132 (55%)
Query: 58 VLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
VL+L N I+ L + F + I++L L + ++ ++D +AF G++ + L L DN L+
Sbjct: 134 VLNLRGNQISELHQGTFTPL--LKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALT 191
Query: 118 TVPS-LIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
TVP +I+ +P L + L N + I + +FQ G+ +++ + I ++F G+
Sbjct: 192 TVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQ 251
Query: 175 KIDTLKLNGNKL 186
++ L L+ N+L
Sbjct: 252 ELRILDLSDNRL 263
Score = 138 (53.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/150 (28%), Positives = 74/150 (49%)
Query: 49 PEGIDLD--TQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNM 106
P G D T V+ ++VL I L +IQ+L ++ K++ +D + + +
Sbjct: 31 PPGCQCDDNTLVVQCGEGQLDVLP--IALN---PSIQRLVIKSNKIKTIDS-SIQFYAEL 84
Query: 107 DELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHT 164
LDLS N L T+P + Y L+ ++L HN I QIS+ +F + +++ QI
Sbjct: 85 TFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISE 144
Query: 165 IYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
++ F + KI+ L L N++ L P+ +
Sbjct: 145 LHQGTFTPLLKIEELNLGENRIGYLDPKAF 174
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 59 LDLSSNNINVLQKEIFLQM-GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLS 117
L L N + +Q + F + G+T ++ L+ L + +F G+ + LDLSDN L
Sbjct: 208 LFLGMNTLQSIQADAFQDLKGLTRLE---LKGASLRNISHDSFLGLQELRILDLSDNRLD 264
Query: 118 TVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNC-QIHTIYSEAFYGID 174
+PS L + L+ ++L N IS +F ++ ++++ ++ + + AF
Sbjct: 265 RIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNG 324
Query: 175 KIDTLKLNGNKL 186
++ L L+ NK+
Sbjct: 325 NLEYLNLSSNKM 336
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 21 ASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
A+CP GC C V+C + +P ++ Q L + SN I + I +T
Sbjct: 28 ANCPPGCQCD--DNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELT 85
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPI 138
+ L L + R F + E+ L+ N + + + +I + +NL N I
Sbjct: 86 FLD---LSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQI 142
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ +F I +++ +I + +AF G+ ++ L L+ N L ++
Sbjct: 143 SELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTV 193
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 156 (60.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 46/173 (26%), Positives = 84/173 (48%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP C+C + V C +R +I E + + + L+ N I ++++ FL+
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRRSDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF +TN+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I +F P ++ + ++N + T+ S F G+ + L L N SL
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLL-RLNLRSNHFTSL 543
>ZFIN|ZDB-GENE-080723-63 [details] [associations]
symbol:zgc:195063 "zgc:195063" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080723-63
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG4THVT6
EMBL:BX510944 EMBL:BC163761 IPI:IPI00611152 RefSeq:NP_001122166.1
UniGene:Dr.110759 Ensembl:ENSDART00000077823 GeneID:558559
KEGG:dre:558559 OMA:PYLINIT NextBio:20882530 Uniprot:B3DK88
Length = 636
Score = 154 (59.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 46/162 (28%), Positives = 84/162 (51%)
Query: 17 SVTQASCPLGCSCKWKA-----GKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQK 71
SV Q CP C+C + G R+V C D + IP + LDT L + + +
Sbjct: 15 SVAQPFCPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLDTVKLRVEKTAVRRVPT 74
Query: 72 EIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLK 129
E F + + ++ L++ + VD +F + + EL L N+++T P SL +P LK
Sbjct: 75 EAFYYL--SELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATFPWESLKEMPSLK 132
Query: 130 SINLAHNPIHQISSYSFQSTP---GIRYIDMSNCQIHTIYSE 168
+++L HN ++++S ++ P I Y+D+S+ ++ T+ S+
Sbjct: 133 TLDL-HN--NRLTSVPVEAAPYLINITYLDISSNKLTTLPSD 171
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 152 (58.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 47/191 (24%), Positives = 86/191 (45%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L ++L L A A CP C C + K T C + +P I +Q + L N I
Sbjct: 11 LLAWVLWLQAWRVAAPCPGACVC-YNEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRI 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTVPSLIY- 124
+ F N+ L+L L +D AF G+ +++LDLSDN L V +
Sbjct: 70 TYVPAASF--RACRNLTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFR 127
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ L +++L + ++ F+ ++Y+ + + + + +AF + + L L+G
Sbjct: 128 GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHG 187
Query: 184 NKLASLKPRTW 194
N++ S+ R +
Sbjct: 188 NRIPSVPERAF 198
>ZFIN|ZDB-GENE-060616-45 [details] [associations]
symbol:lrit1b "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1b" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-060616-45 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 HOGENOM:HOG000063714
HOVERGEN:HBG108105 EMBL:CABZ01112650 EMBL:BC117586 IPI:IPI00607359
RefSeq:NP_001036218.1 UniGene:Dr.84695 Ensembl:ENSDART00000127706
GeneID:553432 KEGG:dre:553432 CTD:553432 InParanoid:Q1ED19
NextBio:20880185 Uniprot:Q1ED19
Length = 654
Score = 154 (59.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 42/154 (27%), Positives = 78/154 (50%)
Query: 22 SCPLGCSC---KWKAGK--RTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQ 76
SCP CSC K G R+V C D + IP+ LD L + +++ + F Q
Sbjct: 22 SCPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFPLDASKLRIEKTSLSRISSAPFQQ 81
Query: 77 MGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLA 134
+ ++++ L++ L + FRG+ +DEL + N+L++ P L+ +P L+ ++L
Sbjct: 82 L--SSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFPWECLLDMPSLRLLDLH 139
Query: 135 HNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSE 168
+N I I + + + Y+D+S+ + T+ E
Sbjct: 140 NNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPE 173
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 153 (58.9 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 3 HKFILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLS 62
H +L V + CP C+C +A + VEC +P + + L +
Sbjct: 5 HYLLLLVGCQAWALGLAYYGCPSECTCS-RASQ--VECTGARIVAMPTPLPWNAMSLQVV 61
Query: 63 SNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSL 122
+ +I L + +FL I+ + L + K +L + AFR + ++ L L++N L +P
Sbjct: 62 NTHITELPENLFLN--ISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIR 119
Query: 123 IY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLK 180
++ + L+S+ L++N + QI F +R + + + +I EAF + + L
Sbjct: 120 VFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLN 179
Query: 181 LNGNKLASLKPR 192
L N L PR
Sbjct: 180 LGRNSFTHLSPR 191
Score = 128 (50.1 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 36/137 (26%), Positives = 69/137 (50%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
QVL L N ++ + F +G N+Q+L L++ ++ + F N+ L LS+N +
Sbjct: 200 QVLRLHENRLSDIPMGTFDALG--NLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
S +P I+ +P L + L N + ++S F P +R + + N I ++ F ++
Sbjct: 258 SQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLN 317
Query: 175 KIDTLKLNGNKLASLKP 191
++ L L+ N+L + P
Sbjct: 318 QLQVLILSHNQLTYISP 334
Score = 112 (44.5 bits), Expect = 0.00055, P = 0.00055
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L++N + +L +F + N++ L L +L + F +N+ EL L N L +
Sbjct: 106 LSLANNKLRMLPIRVF--QDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLES 163
Query: 119 VP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P + ++ L +NL N +S FQ ++ + + ++ I F + +
Sbjct: 164 IPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNL 223
Query: 177 DTLKLNGNKLASLKP 191
L L N++ +L P
Sbjct: 224 QELALQENQIGTLSP 238
Score = 112 (44.5 bits), Expect = 0.00055, P = 0.00055
Identities = 34/169 (20%), Positives = 76/169 (44%)
Query: 31 WKAGKRTVECIDRNFYTIPEGIDLDTQVL---DLSSNNINVLQKEIFLQMGITNIQKLYL 87
W A +++ ++ + +PE + L+ L + N ++ + F +G +++ L L
Sbjct: 53 WNA--MSLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLG--SLRYLSL 108
Query: 88 RKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPIHQISSYS 145
KL + R F+ V N++ L LS+N L + + + L+ + L N + I +
Sbjct: 109 ANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEA 168
Query: 146 FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
F G+ +++ + F + + L+L+ N+L+ + T+
Sbjct: 169 FDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTF 217
Score = 110 (43.8 bits), Expect = 0.00094, P = 0.00094
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 61 LSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP 120
L +N+I L F + +Q L L +L ++ AF G+TN+ EL L N L +
Sbjct: 300 LYNNHITSLADNTFSHLN--QLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLD 357
Query: 121 SLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDT 178
S ++ + L++I+L N + Q+ F + G+ I + N + + F + +
Sbjct: 358 SNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCE 417
Query: 179 LKLNGN 184
L+L N
Sbjct: 418 LRLYDN 423
>UNIPROTKB|E9PLG7 [details] [associations]
symbol:TSKU "Tsukushin" species:9606 "Homo sapiens"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
EMBL:AP003119 InterPro:IPR000372 SMART:SM00013 HGNC:HGNC:28850
ChiTaRS:TSKU IPI:IPI00983998 ProteinModelPortal:E9PLG7 SMR:E9PLG7
Ensembl:ENST00000533752 ArrayExpress:E9PLG7 Bgee:E9PLG7
Uniprot:E9PLG7
Length = 150
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKA-------GKRTVECIDRNFYTIPEGIDLDTQVLDL 61
+ LL + + T C GC C+ + V+C + +P I LDT LDL
Sbjct: 6 LLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDTAHLDL 65
Query: 62 SSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS 121
SSN + ++ + + G T + L L L + AF + ++ LDLS N L+ +P+
Sbjct: 66 SSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGLTALPA 125
Query: 122 LIYIPY-LKSINLAHNPIHQIS 142
+ L +NL+HN + ++S
Sbjct: 126 ESFTSSPLSDVNLSHNQLREVS 147
Score = 100 (40.3 bits), Expect = 0.00046, P = 0.00046
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 85 LYLRKCKLEFVDDRAFRG--VTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQ 140
L L +LE V++ G T + LDLS NLL+++ + + YL+S++L+HN +
Sbjct: 63 LDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGLTA 122
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHTI 165
+ + SF S+P + +++S+ Q+ +
Sbjct: 123 LPAESFTSSP-LSDVNLSHNQLREV 146
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 153 (58.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 49/183 (26%), Positives = 91/183 (49%)
Query: 9 VFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINV 68
+FLL LL + SCP C C + + V C R +P G+ LDT++LDLS N +
Sbjct: 18 LFLL-LLPGGSGGSCPAVCDCT--SQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWG 74
Query: 69 LQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IP 126
LQ+ + ++ + +Q+L L +L ++ AF G+ ++ L L N L + ++ +
Sbjct: 75 LQQGMLSRLSL--LQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLS 132
Query: 127 YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L ++L N I +F ++ +++ + + + AF G+ K+ TL L L
Sbjct: 133 ALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNL 192
Query: 187 ASL 189
+++
Sbjct: 193 STV 195
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY--LKSINLAHNPI 138
N+ L + +C L V +A ++ + LDLS N +S +P+ P L+ + L+ +
Sbjct: 253 NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
I++++F +D+++ + T+ AF DK+ TL+L+GN L
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
>UNIPROTKB|I3LLS2 [details] [associations]
symbol:I3LLS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00650000093266
OMA:ENTTICI Ensembl:ENSSSCT00000024513 Uniprot:I3LLS2
Length = 729
Score = 154 (59.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDL N I L FL G + L+L + +++ V ++ F + N+ ELDLS NL+
Sbjct: 237 LDLEGNGIKHLTNSTFLSCGSLTV--LFLPRNQIDIVPEKTFSSLKNLGELDLSSNLIME 294
Query: 119 VPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+P I+ + L+ +NL+ NP+ + F+S ++ +D+ +I +I + F + +
Sbjct: 295 LPPHIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIASISTRMFQPMKNL 354
Query: 177 DTLKLNGNKLASLKP 191
+ + S P
Sbjct: 355 SHIYFKNFRYCSYAP 369
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 40/132 (30%), Positives = 72/132 (54%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+VL L +N + + +E LQ + ++Q L L + +V F G+ ++ L L DN L
Sbjct: 117 KVLMLQNNQLRQVPEEA-LQ-NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ VP + + L+++ LA N IH I+ Y+F + + + + N +IH++ + F G+
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 175 KIDTLKLNGNKL 186
++TL LN N L
Sbjct: 235 SLETLDLNYNNL 246
Score = 137 (53.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 23 CPLGCSCKWKAGKRT--VECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGIT 80
CP C C+ G+ V+C D +P + + T LDLS NNI+ L + ++
Sbjct: 34 CPSHCHCELD-GRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLHRLCF- 91
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPI 138
+++L L L + AF G+ ++ L L +N L VP +L + L+S+ L N I
Sbjct: 92 -LEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHI 150
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
+ F +R++ + + + + +AF + + + L NK+
Sbjct: 151 SYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKI 198
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G ++ L L K+ + + N+ LDLS NLL +PSL L+ I+L HN
Sbjct: 326 GTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPSLSGCQKLQKIDLRHNE 385
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I++I +FQ +R ++++ +I I+ AF + + L L+ N L+S
Sbjct: 386 IYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSS 436
>UNIPROTKB|I3LT68 [details] [associations]
symbol:LOC100620561 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0001875 "lipopolysaccharide
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR027168 PROSITE:PS51450 InterPro:IPR000483 SMART:SM00082
GeneTree:ENSGT00700000104185 PANTHER:PTHR24365:SF9
Ensembl:ENSSSCT00000029553 Uniprot:I3LT68
Length = 653
Score = 153 (58.9 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 35/154 (22%), Positives = 79/154 (51%)
Query: 39 ECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDR 98
+C++ NFY IP+ I ++LDLS N ++ L F +Q L L +C+++ +DD
Sbjct: 39 QCMELNFYKIPDNIPTSVKILDLSFNYLSHLDSNSF--SSFPELQVLDLSRCEIQTIDDD 96
Query: 99 AFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
A++G+ + L L+ N + ++ + +P L+ + + + + ++ ++
Sbjct: 97 AYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELN 156
Query: 157 MSNCQIHTI-YSEAFYGIDKIDTLKLNGNKLASL 189
+++ IH+ E F + ++ L L+ NK+ ++
Sbjct: 157 VAHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 74 FLQMGITNIQKLYLRKCKLEF---VDDRAFRGVTNMDELDLSDNLLSTVPS-LIYIPYLK 129
F ++ + N+Q L L L F F G T + LDLS N + T+ S + + L+
Sbjct: 367 FTEINLPNLQFLDLSGNHLSFKGCCSHNEF-GTTKLKHLDLSFNEIITMKSNFMGLEQLE 425
Query: 130 SINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
++ H+ + Q + +S F S + Y+D+S IH ++ F G+ + TLK+ GN
Sbjct: 426 YLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLVSLQTLKMAGN 481
Score = 127 (49.8 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 41 IDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRA 99
+D N F + PE QVLDLS I + + + G+ + L L ++ + A
Sbjct: 69 LDSNSFSSFPE-----LQVLDLSRCEIQTIDDDAY--QGLNYLSTLILTGNPIQSLALGA 121
Query: 100 FRGVTNMDEL-DLSDNLLSTVPSLI-YIPYLKSINLAHNPIH--QISSYSFQSTPGIRYI 155
F G+ ++ +L + NL S I ++ LK +N+AHN IH ++ Y F + P + ++
Sbjct: 122 FSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY-FSNLPNLEHL 180
Query: 156 DMSNCQIHTIYSEAFYGIDKIDTLKLN 182
D+S +I IY E + ++ L L+
Sbjct: 181 DLSKNKIENIYHEHLQVLHQVPLLNLS 207
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 35 KRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
K +E I + + L LDLS N +N ++ F ++ + +
Sbjct: 184 KNKIENIYHEHLQVLHQVPLLNLSLDLSLNPLNFIEPGAFNKIRLNGL 231
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 155 (59.6 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/173 (26%), Positives = 84/173 (48%)
Query: 23 CPLGCSCKWKAGKR--TVECIDRNFYTIPE--GIDLDTQVLDLSSNNINVLQKEIFLQMG 78
CP C+C + V C +R +I E + + + L+ N I ++++ FL+
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRRSDFLEA- 432
Query: 79 ITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKSINLAHN 136
T + L+L ++ + DRAF +TN+ L L+ N + + P L Y + L+ + L +N
Sbjct: 433 -TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 137 PIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I +I +F P ++ + ++N + T+ S F G+ + L L N SL
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLL-RLNLRSNHFTSL 543
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 155 (59.6 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C+ + +C + +P +D T LDLS NN+ LQ +F +
Sbjct: 32 ACPAPCRCQEDGIMLSADCSELGLSAVPRDLDPLTAYLDLSMNNLTELQPGLFHHLRF-- 89
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIH 139
+++L L L + AF G+ ++ L L +N L VP+ L +P L+S+ L N I
Sbjct: 90 LEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLIS 149
Query: 140 QISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+ SF+ +R++ + + + I A + + + L N+++ +
Sbjct: 150 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 199
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/132 (28%), Positives = 74/132 (56%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L +N + + + ++ ++Q L L + V +R+F G++++ L L DN L
Sbjct: 115 KILMLQNNQLGGVPADALWEL--PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNAL 172
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L +P L+++ LA N I I Y+FQ+ + + + N +I + + +F G+
Sbjct: 173 TEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLH 232
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 233 NLETLDLNYNEL 244
Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 38 VECIDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
++C+ R+ F +P+ L T LS N +Q+ L+ G T+++ L L + + +
Sbjct: 291 IQCVGRSAFQDLPK---LHT----LSLNGATDIQEFPDLK-GTTSLEILTLTRAGIRLLP 342
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
+ + + L+LS N + +PSL L+ I L HN I I + +F +R +D
Sbjct: 343 PGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALD 402
Query: 157 MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+S I +I+ EAF + + L L N+L++L
Sbjct: 403 LSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTL 435
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q + L+ N I+ + F +T++ L+L +++ + +F G+ N++ LDL+ N L
Sbjct: 187 QAMTLALNRISHIPDYAF--QNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNEL 244
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I + L+ + +N I I +F P ++ I + I + AF + K
Sbjct: 245 QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPK 304
Query: 176 IDTLKLNG 183
+ TL LNG
Sbjct: 305 LHTLSLNG 312
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 154 (59.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 39/132 (29%), Positives = 71/132 (53%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
+VL L +N + + E LQ + ++Q L L + +V F G+ ++ L L DN L
Sbjct: 43 KVLMLQNNQLRQVPTEA-LQ-NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSL 100
Query: 117 STVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P + +P L+++ LA N IH I Y+F + + + + N +I+++ + F G+
Sbjct: 101 TEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLH 160
Query: 175 KIDTLKLNGNKL 186
++TL LN N L
Sbjct: 161 SLETLDLNYNSL 172
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G T+++ L L ++ + A + N+ LDLS NLL +P L+ I+L HN
Sbjct: 252 GTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPCFTACKKLQKIDLHHNE 311
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
I +I + +F+ +R +D++ +I I+ AF + + L ++ N L+S
Sbjct: 312 IDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSS 362
>UNIPROTKB|Q9MYW3 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9796 "Equus
caballus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ EMBL:AY005808
RefSeq:NP_001093239.1 UniGene:Eca.2625 ProteinModelPortal:Q9MYW3
SMR:Q9MYW3 STRING:Q9MYW3 GeneID:100066890 KEGG:ecb:100066890
InParanoid:Q9MYW3 Uniprot:Q9MYW3
Length = 843
Score = 154 (59.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 43/183 (23%), Positives = 88/183 (48%)
Query: 13 TLLASVTQASC--PLGCS-CKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
TL+ ++ SC P C T +C+D N Y IPE I T+ LDLS N + L
Sbjct: 10 TLIPAMAFLSCLRPESWDPCVQVVPNTTYQCMDLNLYKIPENIPTSTKELDLSFNPLKEL 69
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPY 127
F +Q L L +C++E ++D A++G+ ++ L L+ N + ++ + +
Sbjct: 70 GSHSF--SNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRSLALGAFSGLSS 127
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTI-YSEAFYGIDKIDTLKLNGNKL 186
L+++ + + + ++ +++++ IH+ E F + ++ L L+ NK+
Sbjct: 128 LQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEYFSKMPNLEHLDLSNNKI 187
Query: 187 ASL 189
++
Sbjct: 188 QNI 190
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/132 (26%), Positives = 69/132 (52%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ QVLDLS I +++ + + G+ ++ L L + + AF G++++ L +
Sbjct: 79 ELQVLDLSRCEIEMIEDDAY--QGLNHLSTLILTGNPIRSLALGAFSGLSSLQTLVAVET 136
Query: 115 LLSTVPS--LIYIPYLKSINLAHNPIH--QISSYSFQSTPGIRYIDMSNCQIHTIYSEAF 170
LS++ + ++ LK +N+AHN IH ++ Y F P + ++D+SN +I I E
Sbjct: 137 KLSSLEKFPIGHLKTLKELNVAHNLIHSFKLPEY-FSKMPNLEHLDLSNNKIQNISHEDL 195
Query: 171 YGIDKIDTLKLN 182
+ ++ L L+
Sbjct: 196 RVLHQMPLLNLS 207
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 156 (60.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 44/155 (28%), Positives = 81/155 (52%)
Query: 41 IDRNFYT-IPEGI--DL-DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+DR+ T +P+ +L + ++L+LS N + L ++IF+ G +++LYL +L +
Sbjct: 258 LDRSELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFV--GALKLERLYLSGNRLSVLP 315
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIYIP--YLKSINLAHNPIHQISSYSFQSTPGIRY 154
F+ ++ LDLSDN L + P + L+ ++L N + I +S S +R
Sbjct: 316 FMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQ 375
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
+D+S + I +AF +D + L ++GN L L
Sbjct: 376 LDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLL 410
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
D QVLDLS N + F + G +++L+L++ +L+ + + + + +LDLS N
Sbjct: 324 DLQVLDLSDNRLLSFPDNFFARNG--QLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQN 381
Query: 115 LLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAF 170
LS + + + +L ++N++ N + +SS FQS +R +D+S Q + S F
Sbjct: 382 SLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLF 439
>UNIPROTKB|F1NME7 [details] [associations]
symbol:RXFP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000276 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50262
GO:GO:0016021 GO:GO:0007189 InterPro:IPR003591 SMART:SM00369
GO:GO:0016500 GeneTree:ENSGT00650000093266 EMBL:AADN02013079
IPI:IPI00585873 ProteinModelPortal:F1NME7
Ensembl:ENSGALT00000007234 OMA:ITIVFAY Uniprot:F1NME7
Length = 514
Score = 151 (58.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 41 IDRNFYTIPEGIDLDTQV-----LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFV 95
++ + IP+G L T+ LDL N I ++ +F Q + L LR+ +L ++
Sbjct: 51 LNNSLAKIPDG-SLCTETPKLSWLDLEGNRIRAVRGAVFQQC--RELTVLILRRNRLRWI 107
Query: 96 DDRAFRGVTNMDELDLSDNLLSTVP-SLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIR 153
F G++ + ELDLS N L +P SL + + L+ +N+++NP+ +I F+S P +
Sbjct: 108 QSGVFSGLSRLVELDLSLNGLDELPPSLFHGLAALQQLNISYNPLKEICPSQFESLPQLL 167
Query: 154 YIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTWS 195
+ + +I I++ F G+ + + + S P S
Sbjct: 168 SLSLEGLEIPNIHNVTFRGLANLSHIYFKKFQYCSSAPHVRS 209
>WB|WBGene00008093 [details] [associations]
symbol:lron-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00700000104056 eggNOG:KOG0619
EMBL:Z79598 RefSeq:NP_510424.4 ProteinModelPortal:Q93377 SMR:Q93377
EnsemblMetazoa:C44H4.1 GeneID:181553 KEGG:cel:CELE_C44H4.1
UCSC:C44H4.1 CTD:181553 WormBase:C44H4.1 HOGENOM:HOG000018355
InParanoid:Q93377 OMA:TDSKLPH NextBio:914416 Uniprot:Q93377
Length = 607
Score = 152 (58.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 39/128 (30%), Positives = 68/128 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
LDLS+NN+ + L G+ N+ +L L K L + +A + ++++L L N + T
Sbjct: 164 LDLSANNLTAIHPTGLL--GLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHT 221
Query: 119 VP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID 177
+ + + +P LKS++L N I I S SF TP + Y+ + N + +I + F I +
Sbjct: 222 ISRNSLPLPNLKSLSLEVNQIRLIPSDSFSETPLLSYLYLGNNLLTSIDASMFLHIGGLK 281
Query: 178 TLKLNGNK 185
L ++ NK
Sbjct: 282 VLSMSNNK 289
Score = 139 (54.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 48 IPE-GIDLDTQ--VLDLSSNNINVLQKEIFLQM-GITNIQKLYLRKCKLEFVDDRAFRGV 103
IP+ G+ + Q +L L N I +Q FL ++ KL L L + G+
Sbjct: 123 IPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIHPTGLLGL 182
Query: 104 TNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQ 161
N+ +L L NLLS +PS L IP L+ ++L N IH IS S P ++ + + Q
Sbjct: 183 ENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSLP-LPNLKSLSLEVNQ 241
Query: 162 IHTIYSEAFYGIDKIDTLKLNGNKLASL 189
I I S++F + L L N L S+
Sbjct: 242 IRLIPSDSFSETPLLSYLYLGNNLLTSI 269
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 155 (59.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 46/166 (27%), Positives = 84/166 (50%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 18 ACPEKCRCE---GT-TVDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 71
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ K+ +++ AF G + ++E+ L+ N L V ++ + LK++++ N I
Sbjct: 72 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRI 131
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI TI AF + + TL L N
Sbjct: 132 SCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN 177
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 148 (57.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 13 TLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE 72
T A+ TQ CP C C + V C + IP I T++L+L NN+ L
Sbjct: 19 TAFAAPTQ--CPSQCHCH--GDLQHVICDNVGLKKIPR-ISEATRLLNLQRNNLGNLPTG 73
Query: 73 IFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV-PSLIY-IPYLKS 130
F +M + L+L+ C++ + +AF+G+ + L LSDN +ST+ P + L
Sbjct: 74 GFSEM--KGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTY 131
Query: 131 INLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
+ L N I + F + + ++N ++ + F G + L ++GN+L+S++
Sbjct: 132 LYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQ 191
Query: 191 P 191
P
Sbjct: 192 P 192
Score = 139 (54.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 46/158 (29%), Positives = 82/158 (51%)
Query: 41 IDRNFYT-IPEGID---LDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
+D N T +P+GI ++ +L L++N + LQ F G +++ LY+ +L +
Sbjct: 134 LDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTF--KGAKDLRWLYMSGNELSSIQ 191
Query: 97 DRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
+ V N+ L L N LST P L + ++ +NL+ NP+ I ++F+S G RY
Sbjct: 192 PGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSF-G-RY 249
Query: 155 ID---MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
++ +++ + + AF G+ + +L L NKL SL
Sbjct: 250 MEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSL 287
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 152 (58.6 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 46/155 (29%), Positives = 84/155 (54%)
Query: 42 DRNFYTIPEGIDLDT----QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDD 97
+ N T+ G+ L+ QVLDLS NN + KE+F G+ +IQ L L ++ V
Sbjct: 262 ENNLQTLDNGV-LEQFKQLQVLDLSFNNFTDITKEMF--EGLESIQHLNLDSNRISAVAP 318
Query: 98 RAFRGVTNMDELDLSDNLLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYI 155
AF G T + L L +N L+ V +L P+L+ ++L++N I ++ SF P + +
Sbjct: 319 GAFAG-TPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTL 377
Query: 156 DMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLK 190
D++N +I ++ +++ G + + ++L N + +K
Sbjct: 378 DLANNKIMSLQNKSLSGPENL-AVRLQENPVVCVK 411
Score = 127 (49.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 51/192 (26%), Positives = 91/192 (47%)
Query: 7 LSVFLLTLLASVTQASCP------LGCSCKWKAGKRTVECIDRNFYTIPEGIDLDT--QV 58
L V LL L A + A CP CSC ++C + + E + T +V
Sbjct: 5 LCVALLVLPACL--AFCPKLFQNQTACSCDSTVEGPVIKCSGHDGLRMVEKLSTTTTMEV 62
Query: 59 LDLSSNNINVLQ--KEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTN-MDELDLSDNL 115
+L+ N ++++ + F + I+KL L ++E + D AF G+ N M EL LS+N
Sbjct: 63 RELALENADIIEVGPKAFKTL---RIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENN 119
Query: 116 LSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGI 173
L VP+ L + L ++L N I I++ +F + + +++ QI ++ ++ F +
Sbjct: 120 LKEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANV 179
Query: 174 D-KIDTLKLNGN 184
+ L L+ N
Sbjct: 180 KMSLQNLILDNN 191
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L+ NN+ L + Q +Q L L + F G+ ++ L+L N +S
Sbjct: 258 LYLNENNLQTLDNGVLEQF--KQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISA 315
Query: 119 V-PSLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID 177
V P L + L +N + ++S + + P +R + +SN I ++ +F + +
Sbjct: 316 VAPGAFAGTPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLH 375
Query: 178 TLKLNGNKLASLKPRTWS 195
TL L NK+ SL+ ++ S
Sbjct: 376 TLDLANNKIMSLQNKSLS 393
>RGD|3870 [details] [associations]
symbol:Tlr4 "toll-like receptor 4" species:10116 "Rattus
norvegicus" [GO:0000187 "activation of MAPK activity"
evidence=IEA;ISO] [GO:0001530 "lipopolysaccharide binding"
evidence=ISO;IDA] [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA;ISO;ISS] [GO:0002218 "activation of innate immune
response" evidence=ISO] [GO:0002224 "toll-like receptor signaling
pathway" evidence=IDA] [GO:0002282 "microglial cell activation
involved in immune response" evidence=IDA] [GO:0002322 "B cell
proliferation involved in immune response" evidence=ISO] [GO:0002537
"nitric oxide production involved in inflammatory response"
evidence=IEA;ISO] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0002758 "innate immune
response-activating signal transduction" evidence=IMP] [GO:0003009
"skeletal muscle contraction" evidence=IEP] [GO:0004872 "receptor
activity" evidence=IDA;TAS] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005887 "integral to plasma
membrane" evidence=IEA;ISO;TAS] [GO:0006691 "leukotriene metabolic
process" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEP] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA;ISO] [GO:0009617 "response to bacterium" evidence=ISO]
[GO:0009636 "response to toxic substance" evidence=IEP] [GO:0009897
"external side of plasma membrane" evidence=IEA;ISO] [GO:0009986
"cell surface" evidence=IDA] [GO:0010572 "positive regulation of
platelet activation" evidence=IEA;ISO] [GO:0014823 "response to
activity" evidence=IEP] [GO:0016064 "immunoglobulin mediated immune
response" evidence=IEP] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IEA;ISO] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0032496 "response to lipopolysaccharide" evidence=ISO;IEP;IDA]
[GO:0032497 "detection of lipopolysaccharide" evidence=IEA;ISO;ISS]
[GO:0032570 "response to progesterone stimulus" evidence=IEP]
[GO:0032609 "interferon-gamma production" evidence=IEA;ISO]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA;ISO] [GO:0032700 "negative regulation of interleukin-17
production" evidence=IEA;ISO] [GO:0032707 "negative regulation of
interleukin-23 production" evidence=IEA;ISO] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA;ISO] [GO:0032727 "positive regulation of
interferon-alpha production" evidence=IEA;ISO] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA;ISO]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IEA;ISO] [GO:0032732 "positive regulation of interleukin-1
production" evidence=IEA;ISO] [GO:0032733 "positive regulation of
interleukin-10 production" evidence=IEA;ISO] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IEA;ISO]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA;ISO] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA;ISO] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0032868
"response to insulin stimulus" evidence=IEP] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=ISO]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA;ISO] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA;ISO] [GO:0042535 "positive regulation of tumor necrosis
factor biosynthetic process" evidence=IEA;ISO] [GO:0042742 "defense
response to bacterium" evidence=IDA] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IMP] [GO:0043548
"phosphatidylinositol 3-kinase binding" evidence=IPI] [GO:0045084
"positive regulation of interleukin-12 biosynthetic process"
evidence=IEA;ISO] [GO:0045087 "innate immune response"
evidence=IEA;TAS] [GO:0045348 "positive regulation of MHC class II
biosynthetic process" evidence=IEA;ISO] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA;ISO]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA;ISO] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA;ISO] [GO:0045471 "response
to ethanol" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA;ISO]
[GO:0046696 "lipopolysaccharide receptor complex"
evidence=IEA;ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0050671 "positive regulation of lymphocyte
proliferation" evidence=ISO] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0050727 "regulation of inflammatory
response" evidence=IEA;ISO] [GO:0050729 "positive regulation of
inflammatory response" evidence=IMP] [GO:0050731 "positive regulation
of peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA;ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA;ISO;IMP] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEP] [GO:0051770 "positive regulation of
nitric-oxide synthase biosynthetic process" evidence=IEA;ISO]
[GO:0051930 "regulation of sensory perception of pain" evidence=IMP]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA;ISO] [GO:0060907 "positive regulation of macrophage
cytokine production" evidence=IEA;ISO] [GO:0070373 "negative
regulation of ERK1 and ERK2 cascade" evidence=IEA;ISO] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA;ISO]
[GO:0070430 "positive regulation of nucleotide-binding
oligomerization domain containing 1 signaling pathway"
evidence=IEA;ISO] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IEA;ISO] [GO:0070542 "response to fatty acid"
evidence=IDA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=ISO] [GO:0071223 "cellular response to lipoteichoic acid"
evidence=IEA;ISO] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA;IEP;ISO] [GO:0045121 "membrane raft"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255 RGD:3870 GO:GO:0005737
GO:GO:0048471 GO:GO:0009986 GO:GO:0005887 GO:GO:0006979 GO:GO:0009897
GO:GO:0032689 GO:GO:0050829 GO:GO:0014823 GO:GO:0045471 GO:GO:0070542
GO:GO:0009636 GO:GO:0043123 GO:GO:0051930 GO:GO:0042742 GO:GO:0006954
GO:GO:0001666 GO:GO:0070374 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 SMART:SM00082 GO:GO:0045087 GO:GO:0032722
GO:GO:0032755 GO:GO:0000187 GO:GO:0050729 GO:GO:0032868 GO:GO:0043065
GO:GO:0050731 GO:GO:0032720 GO:GO:0032715 GO:GO:0003009 GO:GO:0030890
GO:GO:0051092 GO:GO:0032570 GO:GO:0070373 GO:GO:0032757 GO:GO:0071260
GO:GO:0045429 GO:GO:0004888 GO:GO:0045416 GO:GO:0032729 GO:GO:0032760
GO:GO:0016064 GO:GO:0002224 GO:GO:0046696 GO:GO:0001530 GO:GO:0052033
GO:GO:0043388 GO:GO:0042535 GO:GO:0045348 GO:GO:0032735 GO:GO:0042346
GO:GO:0051770 GO:GO:0071223 GO:GO:0032733 GO:GO:0060907 GO:GO:0032727
GO:GO:0002537 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252 GO:GO:0032609
SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0045084 GO:GO:0001875
GO:GO:0032497 GO:GO:0010572 GO:GO:0032707 GO:GO:0060729 GO:GO:0045359
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ GO:GO:0032732
GO:GO:0070430 GO:GO:0070434 EMBL:AF057025 IPI:IPI00212570
RefSeq:NP_062051.1 UniGene:Rn.14534 ProteinModelPortal:Q9QX05
SMR:Q9QX05 STRING:Q9QX05 PRIDE:Q9QX05 GeneID:29260 KEGG:rno:29260
UCSC:RGD:3870 InParanoid:Q9QX05 NextBio:608584 Genevestigator:Q9QX05
GermOnline:ENSRNOG00000010522 Uniprot:Q9QX05
Length = 835
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 113 DNLLSTVPSLIYIPY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY 171
D LS +P IPY K+++L+ NP+ + SYSF + ++++D+S C+I TI +A++
Sbjct: 41 DQNLSKIPH--DIPYSTKNLDLSFNPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWH 98
Query: 172 GIDKIDTLKLNGNKLASLKPRTWS 195
G++++ TL L GN + S P ++S
Sbjct: 99 GLNQLSTLVLTGNPIKSFSPGSFS 122
Score = 136 (52.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 36/156 (23%), Positives = 79/156 (50%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
T +C+D+N IP I T+ LDLS N + +L+ F + +Q L L +C++E ++
Sbjct: 36 TYQCMDQNLSKIPHDIPYSTKNLDLSFNPLKILRSYSFTNF--SQLQWLDLSRCEIETIE 93
Query: 97 DRAFRGVTNMDELDLSDN-LLSTVP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
D+A+ G+ + L L+ N + S P S + L+++ + + + ++
Sbjct: 94 DKAWHGLNQLSTLVLTGNPIKSFSPGSFSGLTNLENLVAVETKMTSLEGFHIGQLISLKK 153
Query: 155 IDMSNCQIHTI-YSEAFYGIDKIDTLKLNGNKLASL 189
+++++ IH+ E F + ++ + L+ N + ++
Sbjct: 154 LNVAHNLIHSFKLPEYFSNLTNLEHVDLSYNYIQTI 189
>UNIPROTKB|Q9QX05 [details] [associations]
symbol:Tlr4 "Toll-like receptor 4" species:10116 "Rattus
norvegicus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027168
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:3870 GO:GO:0005737 GO:GO:0048471 GO:GO:0009986
GO:GO:0005887 GO:GO:0006979 GO:GO:0009897 GO:GO:0032689
GO:GO:0050829 GO:GO:0014823 GO:GO:0045471 GO:GO:0070542
GO:GO:0009636 GO:GO:0043123 GO:GO:0051930 GO:GO:0042742
GO:GO:0006954 GO:GO:0001666 GO:GO:0070374 GO:GO:0046330
GO:GO:0045944 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
GO:GO:0032722 GO:GO:0032755 GO:GO:0000187 GO:GO:0050729
GO:GO:0032868 GO:GO:0043065 GO:GO:0050731 GO:GO:0032720
GO:GO:0032715 GO:GO:0003009 GO:GO:0030890 GO:GO:0051092
GO:GO:0032570 GO:GO:0070373 GO:GO:0032757 GO:GO:0071260
GO:GO:0045429 GO:GO:0004888 GO:GO:0045416 GO:GO:0032729
GO:GO:0032760 GO:GO:0016064 GO:GO:0002224 GO:GO:0046696
GO:GO:0001530 GO:GO:0052033 GO:GO:0043388 GO:GO:0042535
GO:GO:0045348 GO:GO:0032735 GO:GO:0042346 GO:GO:0051770
GO:GO:0071223 GO:GO:0032733 GO:GO:0060907 GO:GO:0032727
GO:GO:0002537 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0032609 SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0045084
GO:GO:0001875 GO:GO:0032497 GO:GO:0010572 GO:GO:0032707
GO:GO:0060729 GO:GO:0045359 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 eggNOG:NOG249751
HOGENOM:HOG000037951 KO:K10160 OrthoDB:EOG4P8FHQ GO:GO:0032732
GO:GO:0070430 GO:GO:0070434 EMBL:AF057025 IPI:IPI00212570
RefSeq:NP_062051.1 UniGene:Rn.14534 ProteinModelPortal:Q9QX05
SMR:Q9QX05 STRING:Q9QX05 PRIDE:Q9QX05 GeneID:29260 KEGG:rno:29260
UCSC:RGD:3870 InParanoid:Q9QX05 NextBio:608584
Genevestigator:Q9QX05 GermOnline:ENSRNOG00000010522 Uniprot:Q9QX05
Length = 835
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 113 DNLLSTVPSLIYIPY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFY 171
D LS +P IPY K+++L+ NP+ + SYSF + ++++D+S C+I TI +A++
Sbjct: 41 DQNLSKIPH--DIPYSTKNLDLSFNPLKILRSYSFTNFSQLQWLDLSRCEIETIEDKAWH 98
Query: 172 GIDKIDTLKLNGNKLASLKPRTWS 195
G++++ TL L GN + S P ++S
Sbjct: 99 GLNQLSTLVLTGNPIKSFSPGSFS 122
Score = 136 (52.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 36/156 (23%), Positives = 79/156 (50%)
Query: 37 TVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVD 96
T +C+D+N IP I T+ LDLS N + +L+ F + +Q L L +C++E ++
Sbjct: 36 TYQCMDQNLSKIPHDIPYSTKNLDLSFNPLKILRSYSFTNF--SQLQWLDLSRCEIETIE 93
Query: 97 DRAFRGVTNMDELDLSDN-LLSTVP-SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRY 154
D+A+ G+ + L L+ N + S P S + L+++ + + + ++
Sbjct: 94 DKAWHGLNQLSTLVLTGNPIKSFSPGSFSGLTNLENLVAVETKMTSLEGFHIGQLISLKK 153
Query: 155 IDMSNCQIHTI-YSEAFYGIDKIDTLKLNGNKLASL 189
+++++ IH+ E F + ++ + L+ N + ++
Sbjct: 154 LNVAHNLIHSFKLPEYFSNLTNLEHVDLSYNYIQTI 189
>UNIPROTKB|F1SMI0 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9823 "Sus scrofa"
[GO:0045087 "innate immune response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0050829 "defense response
to Gram-negative bacterium" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=IEA] [GO:0042116
"macrophage activation" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF9
EMBL:CR938718 Ensembl:ENSSSCT00000006051 OMA:RNATCQI
ArrayExpress:F1SMI0 Uniprot:F1SMI0
Length = 841
Score = 153 (58.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 35/154 (22%), Positives = 79/154 (51%)
Query: 39 ECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDR 98
+C++ NFY IP+ I ++LDLS N ++ L F +Q L L +C+++ +DD
Sbjct: 39 QCMELNFYKIPDNIPTSVKILDLSFNYLSHLDSNSF--SSFPELQVLDLSRCEIQTIDDD 96
Query: 99 AFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
A++G+ + L L+ N + ++ + +P L+ + + + + ++ ++
Sbjct: 97 AYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELN 156
Query: 157 MSNCQIHTI-YSEAFYGIDKIDTLKLNGNKLASL 189
+++ IH+ E F + ++ L L+ NK+ ++
Sbjct: 157 VAHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 128 (50.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 74 FLQMGITNIQKLYLRKCKLEF---VDDRAFRGVTNMDELDLSDNLLSTVPS-LIYIPYLK 129
F ++ + N+Q L L L F F G T + LDLS N + T+ S + + L+
Sbjct: 367 FTEINLPNLQFLDLSGNHLSFKGCCSHNEF-GTTKLKHLDLSFNEIITMKSNFMGLEQLE 425
Query: 130 SINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
++ H+ + Q + +S F S + Y+D+S IH ++ F G+ + TLK+ GN
Sbjct: 426 YLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLVSLQTLKMAGN 481
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 41 IDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRA 99
+D N F + PE QVLDLS I + + + G+ + L L ++ + A
Sbjct: 69 LDSNSFSSFPE-----LQVLDLSRCEIQTIDDDAY--QGLNYLSTLILTGNPIQSLALGA 121
Query: 100 FRGVTNMDEL-DLSDNLLSTVPSLI-YIPYLKSINLAHNPIH--QISSYSFQSTPGIRYI 155
F G+ ++ +L + NL S I ++ LK +N+AHN IH ++ Y F + P + ++
Sbjct: 122 FSGLPSLQKLVAVETNLASLEDFPIGHLKTLKELNVAHNHIHSFKLPEY-FSNLPNLEHL 180
Query: 156 DMSNCQIHTIYSEAFYGIDKIDTLKLN 182
D+S +I IY E + ++ L L+
Sbjct: 181 DLSKNKIENIYHEHLQVLHQVPLLNLS 207
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 35 KRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
K +E I + + L LDLS N +N ++ F ++ + +
Sbjct: 184 KNKIENIYHEHLQVLHQVPLLNLSLDLSLNPLNFIEPGAFNKIRLNGL 231
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 150 (57.9 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 45/187 (24%), Positives = 92/187 (49%)
Query: 5 FILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+ +SV +L +L ++ A CP C C+ K C + F+++P D + L L N
Sbjct: 18 YAMSV-VLKMLPALGMA-CPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHN 71
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
+I L+++ F + + L+L ++ V + AF+G+ + EL LS N + +P+ +
Sbjct: 72 HITALERDQFASF--SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTF 129
Query: 125 IPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
L++++L+ N + + F ++ + + + + TI F+ ++ L L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 183 GNKLASL 189
N+L SL
Sbjct: 190 TNRLRSL 196
Score = 139 (54.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 35/133 (26%), Positives = 70/133 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I+ ++++ F G+ +++L L K+ ++ + F + N+ LDLS N LS+
Sbjct: 90 LHLDHNQISTVKEDAF--QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSS 147
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P L Y + L++++L N + I F + ++D+S ++ ++ F G+ K+
Sbjct: 148 LHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKL 207
Query: 177 DTLKLNGNKLASL 189
L L N+L +
Sbjct: 208 RELHLEHNQLTKI 220
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 85 LYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQIS 142
L LR + ++ F + + L L N +STV + + LK + L+ N I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 143 SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT-W 194
+ +F ++ +D+S Q+ +++ E FYG+ K+ TL L N L ++ R W
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 150 (57.9 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 45/187 (24%), Positives = 92/187 (49%)
Query: 5 FILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
+ +SV +L +L ++ A CP C C+ K C + F+++P D + L L N
Sbjct: 18 YAMSV-VLKMLPALGMA-CPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHN 71
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY 124
+I L+++ F + + L+L ++ V + AF+G+ + EL LS N + +P+ +
Sbjct: 72 HITALERDQFASF--SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTF 129
Query: 125 IPY--LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLN 182
L++++L+ N + + F ++ + + + + TI F+ ++ L L+
Sbjct: 130 TQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLS 189
Query: 183 GNKLASL 189
N+L SL
Sbjct: 190 TNRLRSL 196
Score = 139 (54.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 35/133 (26%), Positives = 70/133 (52%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I+ ++++ F G+ +++L L K+ ++ + F + N+ LDLS N LS+
Sbjct: 90 LHLDHNQISTVKEDAF--QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSS 147
Query: 119 V-PSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKI 176
+ P L Y + L++++L N + I F + ++D+S ++ ++ F G+ K+
Sbjct: 148 LHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKL 207
Query: 177 DTLKLNGNKLASL 189
L L N+L +
Sbjct: 208 RELHLEHNQLTKI 220
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 85 LYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQIS 142
L LR + ++ F + + L L N +STV + + LK + L+ N I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 143 SYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT-W 194
+ +F ++ +D+S Q+ +++ E FYG+ K+ TL L N L ++ R W
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 152 (58.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 39/153 (25%), Positives = 76/153 (49%)
Query: 44 NFYTIPE-GIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRG 102
NF I + G+ +Q+ L +++ F +TN+Q+LY+ ++ + AF G
Sbjct: 107 NFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAG 166
Query: 103 VTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNC 160
+ N+ L L+ N L + S + P L+ + + NP+ I +F+ +R + ++
Sbjct: 167 LRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGM 226
Query: 161 QIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRT 193
++ I AF G+D +++L NKL + P+T
Sbjct: 227 ELTDIPGNAFVGLDNLESLSFYDNKLVRV-PQT 258
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 6 ILSVFLLTLL--ASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSS 63
I + LL +L +SV CP C C+ R ++T P+ + +D +
Sbjct: 14 ICFILLLAVLGLSSVHSTECPQLCVCEI-----------RPWFT-PQSTYREATTVDCND 61
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPS-- 121
++ + + + +Q Y+ + E + N+ ELDLS N S +
Sbjct: 62 LHLTRIPGNLSADTQVLLLQSNYIARTSEELEQ------LLNLTELDLSQNNFSNIRDIG 115
Query: 122 LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
L + L +++L N I ++ +S Q ++ + +++ QI +I AF G+ + L L
Sbjct: 116 LTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHL 175
Query: 182 NGNKLASLKPRTW 194
N N+L ++ R W
Sbjct: 176 NSNRLKAIDSR-W 187
>ZFIN|ZDB-GENE-060531-8 [details] [associations]
symbol:rxfp2l "relaxin/insulin-like family peptide
receptor 2, like" species:7955 "Danio rerio" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 ZFIN:ZDB-GENE-060531-8
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
OrthoDB:EOG4NGGM1 EMBL:BX005476 EMBL:CU915756 IPI:IPI00897044
UniGene:Dr.141917 Ensembl:ENSDART00000143448 Uniprot:B0S5B5
Length = 622
Score = 151 (58.2 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 40/169 (23%), Positives = 89/169 (52%)
Query: 24 PLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQ 83
P C C+ G++ V C +N +P + + L+L+SN I L +++F++ +++
Sbjct: 21 PDTCHCE---GRK-VNCNGKNLLHVP-AVSSNVTALELNSNRIESLSRDLFIRY--RHLE 73
Query: 84 KLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQI 141
+L+L +E + RAF G+ + +L LS N +S++ + I+ + L+ + L N I +
Sbjct: 74 RLHLESNSIETISKRAFSGLVALRKLFLSQNKISSLKAGIFSDLSSLEWLILDENRISSL 133
Query: 142 SSYSFQSTPGIRYIDMSNCQIHTIYSEAF-YGIDKIDTLKLNGNKLASL 189
SF+ + ++ + N + + + + +++ L++ GN ++SL
Sbjct: 134 RQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEMPRLNWLEMEGNIISSL 182
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 155 (59.6 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKE-IFLQMGIT 80
+CP C C+ G TV+C ++ IP+ I T L L++N VL+ IF ++
Sbjct: 312 ACPEKCRCE---GT-TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL--P 365
Query: 81 NIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPI 138
++K+ K+ +++ AF G ++E+ L+ N L V ++ + LK++ L N I
Sbjct: 366 QLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 425
Query: 139 HQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
+ + SF +R + + + QI TI AF + + TL L N
Sbjct: 426 SCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 471
Score = 88 (36.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 59 LDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLST 118
L L N I L K +F G+ ++Q L L K+ + AF+ + N++ L L DN L T
Sbjct: 160 LVLYGNKITELPKSLF--EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 217
Query: 119 VPSLIYIPY--LKSINLAHNP 137
+ + P +++++LA NP
Sbjct: 218 IAKGTFSPLRAIQTMHLAQNP 238
Score = 72 (30.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 155 IDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
ID+SN +I T+ +++F + ++ TL L+ N+L + PRT+
Sbjct: 589 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 628
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 153 (58.9 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 55 DTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+ +VL L +N + + E G++ +Q L L + V + +F G+ + L L DN
Sbjct: 60 ELKVLTLQNNQLKTVPSEAI--RGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDN 117
Query: 115 LLSTVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG 172
L VP L +P L+++ LA N I I Y+F + + + + N +I + F G
Sbjct: 118 SLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDG 177
Query: 173 IDKIDTLKLNGNKL 186
+D ++TL LN N L
Sbjct: 178 LDNLETLDLNYNNL 191
Score = 144 (55.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G +++ L L K+ + + + LDLS N + +PS L+ I+L N
Sbjct: 271 GTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPSFDGCHALEEISLQRNQ 330
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLAS 188
IHQI +FQ +R +D+S QIH I++ AF + I L ++ N+L S
Sbjct: 331 IHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTS 381
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
Q L L+ N I+ + F + +++ L+L K++ + F G+ N++ LDL+ N L
Sbjct: 134 QALTLALNKISSIPDYAFTNL--SSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNL 191
Query: 117 STVPSLIY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDK 175
P I +P LK + N I I +F P +R I + + + + + AF+ +
Sbjct: 192 GEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSD 251
Query: 176 IDTLKLNGNKLASLKP 191
+ +L + G + P
Sbjct: 252 LHSLVIRGASMVQQFP 267
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 34/132 (25%), Positives = 63/132 (47%)
Query: 60 DLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTV 119
D+S NNI L ++ F +++L L L F+ +A G+ + L L +N L TV
Sbjct: 17 DISMNNITQLPEDAFKNFPF--LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTV 74
Query: 120 PS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKID 177
PS + + L+S+ L N I + SF+ +R++ + + + + + +
Sbjct: 75 PSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQ 134
Query: 178 TLKLNGNKLASL 189
L L NK++S+
Sbjct: 135 ALTLALNKISSI 146
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 149 (57.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 47/191 (24%), Positives = 85/191 (44%)
Query: 7 LSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNI 66
L ++L L A A CP C C + K T C + +P I +Q + L N I
Sbjct: 11 LLAWVLWLQAWRVAAPCPGACVC-YSEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRI 69
Query: 67 NVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNL-LSTVPSLIY- 124
+ F N+ L+L L +D AF G+ +++LDLSDN L V +
Sbjct: 70 AYVPAASF--RACRNLTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFR 127
Query: 125 -IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNG 183
+ L +++L + ++ F+ ++Y+ + + + + +AF + + L L+G
Sbjct: 128 GLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHG 187
Query: 184 NKLASLKPRTW 194
N + S+ R +
Sbjct: 188 NHIPSVPERAF 198
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 155 (59.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 10 FLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
FL LL + SCP C C + TV C+ TIP+ I T +LDL N+I +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREI 65
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPY 127
Q F ++ N+ L L +++ + R+F + N+ L L N + ++ + +
Sbjct: 66 QPGAFRRL--KNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRS 123
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L+ + L N + + +F P + + + N +I I+ F ++ + L+L+ N L
Sbjct: 124 LEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 155 (59.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 10 FLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVL 69
FL LL + SCP C C + TV C+ TIP+ I T +LDL N+I +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREI 65
Query: 70 QKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPY 127
Q F ++ N+ L L +++ + R+F + N+ L L N + ++ + +
Sbjct: 66 QPGAFRRL--KNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRS 123
Query: 128 LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKL 186
L+ + L N + + +F P + + + N +I I+ F ++ + L+L+ N L
Sbjct: 124 LEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 150 (57.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 34 GKRTVECIDRNFYT-IPEGIDLDTQV----LDLSSNNINVLQKEIFLQMGITNIQKLYLR 88
GK V + RN T +P+G+ L Q+ L L SN + L + +G + +L L
Sbjct: 170 GKLKVLDLSRNNLTHLPQGL-LGAQIKLEKLLLYSNRLMSLDSGLLANLGA--LTELRLE 226
Query: 89 KCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSF 146
+ L + AF + N+ L LS NLL ++P ++ + +L + L NP+ ++ F
Sbjct: 227 RNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLF 286
Query: 147 QSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
G+R + ++ + T+ + AF + + TL L N L S P
Sbjct: 287 GEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALP 331
Score = 129 (50.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 50/188 (26%), Positives = 84/188 (44%)
Query: 8 SVFLLTLLASV-TQA-SCPLGCSCKWKAGKRTVECIDRNFYTIPE-GIDLD-TQVLDLSS 63
SV L +L+ V Q CP C C + V+C + I E G+ + T +L L
Sbjct: 4 SVLLSAVLSLVGAQPFPCPKTCKC---VVRDAVQCSGGSVAHIAELGLPTNLTHIL-LFR 59
Query: 64 NNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLI 123
+ VLQ F G+T +Q+L L + +D F + + L L+ N +S +P I
Sbjct: 60 MDRGVLQSHSF--SGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAI 117
Query: 124 Y--IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ L+ + L HN + + FQ +R + ++ Q+ + + F + K+ L L
Sbjct: 118 LDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDL 177
Query: 182 NGNKLASL 189
+ N L L
Sbjct: 178 SRNNLTHL 185
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 152 (58.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 38/132 (28%), Positives = 72/132 (54%)
Query: 57 QVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLL 116
++L L +N ++ + E + N+Q L L + V + +F G+ ++ L L DN L
Sbjct: 22 KILMLQNNQLSRIPAEALRDL--PNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDNAL 79
Query: 117 STVP--SLIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGID 174
+ +P +L +P L+++ LA N I +I Y+FQ+ + + + N +I + + F G+
Sbjct: 80 TEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGLH 139
Query: 175 KIDTLKLNGNKL 186
++TL LN N+L
Sbjct: 140 NLETLDLNYNEL 151
Score = 145 (56.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 34/112 (30%), Positives = 60/112 (53%)
Query: 78 GITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPYLKSINLAHNP 137
G T+++ L L + + + + + N+ L+LS N + +PS L+ + L HN
Sbjct: 231 GTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPSFHRCQRLEELGLQHNR 290
Query: 138 IHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
IH+I + +F +R ID+S IH I+ +AF + + L L+ N+LA+L
Sbjct: 291 IHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAAL 342
>WB|WBGene00004257 [details] [associations]
symbol:pxn-2 species:6239 "Caenorhabditis elegans"
[GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0010172 "embryonic body morphogenesis"
evidence=IMP] [GO:0016203 "muscle attachment" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0071711 "basement
membrane organization" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0048681 "negative regulation of axon
regeneration" evidence=IMP] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591
SMART:SM00369 GO:GO:0020037 GO:GO:0016203 GO:GO:0004601
GO:GO:0005604 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0071711 GO:GO:0010172
SUPFAM:SSF48113 Gene3D:1.10.640.10 GO:GO:0048681 EMBL:Z68006
HSSP:P05164 GeneTree:ENSGT00550000074325 EMBL:Z68005 PIR:T23007
RefSeq:NP_509834.1 ProteinModelPortal:G5EG78 SMR:G5EG78
EnsemblMetazoa:K09C8.5 GeneID:181288 KEGG:cel:CELE_K09C8.5
CTD:181288 WormBase:K09C8.5 OMA:MEFERNG NextBio:913292
Uniprot:G5EG78
Length = 1328
Score = 154 (59.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 6 ILSVFLLTLLASVTQASCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNN 65
+L FLL + S++ A CP C C AG V C +N IP I + T L S+N
Sbjct: 1 MLLEFLLLIGISLSTA-CPSECRC---AGL-DVHCEGKNLTAIPGHIPIATTNLYFSNNL 55
Query: 66 INVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYI 125
+N L K F + N+Q L L + +++ + LDLS N + VP L
Sbjct: 56 LNSLSKSNF--QALPNLQYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIRYVPKLSTA 113
Query: 126 PY-LKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYG--IDKIDTLKLN 182
P L S+NL HN I ++ + +P ++ + +I ++ + F + + T+K+
Sbjct: 114 PNALVSLNLVHNEISRLDNDLVSHSPYMQTFLIQRNRIQSLPHDFFNSRMVPTLKTVKMA 173
Query: 183 GN 184
GN
Sbjct: 174 GN 175
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/188 (26%), Positives = 85/188 (45%)
Query: 7 LSVFLLTLLASVTQAS--CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSN 64
L+ LL LA V S CP C+C TV C NF ++P G+ + L L +N
Sbjct: 8 LAALLLAALAWVPGGSPACPALCTCY--VSPPTVSCQANNFSSVPTGLPPGARRLFLQNN 65
Query: 65 NINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN--LLSTVPSL 122
I L+ F +T L+L + + FR + ++ELDL DN L P
Sbjct: 66 VIRALRAGTFGPSTVT----LWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDT 121
Query: 123 IY-IPYLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKL 181
+ + L++++L + + S F+ ++Y+ + + + + F + + L L
Sbjct: 122 FHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFL 181
Query: 182 NGNKLASL 189
+GN+L +L
Sbjct: 182 HGNRLRAL 189
>UNIPROTKB|Q68Y56 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9823 "Sus
scrofa" [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0050829
"defense response to Gram-negative bacterium" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0042116 "macrophage activation" evidence=IEA] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200
GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 eggNOG:NOG249751 HOGENOM:HOG000037951
OrthoDB:EOG4P8FHQ EMBL:AB188301 UniGene:Ssc.19703
ProteinModelPortal:Q68Y56 SMR:Q68Y56 STRING:Q68Y56 Uniprot:Q68Y56
Length = 841
Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/154 (22%), Positives = 78/154 (50%)
Query: 39 ECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDR 98
+C++ NFY IP+ I ++LDLS N ++ L F +Q L L +C+++ +DD
Sbjct: 39 QCMELNFYKIPDNIPTSVKILDLSFNYLSHLDSNSF--SSFPELQVLDLSRCEIQTIDDD 96
Query: 99 AFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
A++G+ + L L+ N + ++ + +P L+ + + + + + ++
Sbjct: 97 AYQGLNYLSTLILTGNPIQSLALGAFSGLPSLQKLVAVETNLASLEDFPIGHLKTLNELN 156
Query: 157 MSNCQIHTI-YSEAFYGIDKIDTLKLNGNKLASL 189
+++ IH+ E F + ++ L L+ NK+ ++
Sbjct: 157 VAHNHIHSFKLPEYFSNLPNLEHLDLSKNKIENI 190
Score = 128 (50.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 74 FLQMGITNIQKLYLRKCKLEF---VDDRAFRGVTNMDELDLSDNLLSTVPS-LIYIPYLK 129
F ++ + N+Q L L L F F G T + LDLS N + T+ S + + L+
Sbjct: 367 FTEINLPNLQFLDLSGNHLSFKGCCSHNEF-GTTKLKHLDLSFNEIITMKSNFMGLEQLE 425
Query: 130 SINLAHNPIHQISSYS-FQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGN 184
++ H+ + Q + +S F S + Y+D+S IH ++ F G+ + TLK+ GN
Sbjct: 426 YLDFQHSSLKQANDFSIFLSLRNLHYLDISYTNIHVVFRGIFAGLVSLQTLKMAGN 481
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 44/160 (27%), Positives = 78/160 (48%)
Query: 41 IDRN-FYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNIQKLYLRKCKLEFVDDRA 99
+D N F + PE QVLDLS I + + + G+ + L L ++ + A
Sbjct: 69 LDSNSFSSFPE-----LQVLDLSRCEIQTIDDDAY--QGLNYLSTLILTGNPIQSLALGA 121
Query: 100 FRGVTNMDEL-DLSDNLLSTVPSLI-YIPYLKSINLAHNPIH--QISSYSFQSTPGIRYI 155
F G+ ++ +L + NL S I ++ L +N+AHN IH ++ Y F + P + ++
Sbjct: 122 FSGLPSLQKLVAVETNLASLEDFPIGHLKTLNELNVAHNHIHSFKLPEY-FSNLPNLEHL 180
Query: 156 DMSNCQIHTIYSEAFYGIDKID----TLKLNGNKLASLKP 191
D+S +I IY E + ++ +L L+ N L ++P
Sbjct: 181 DLSKNKIENIYHEHLQVLHQVPLHNLSLDLSLNPLNFIEP 220
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 35 KRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITNI 82
K +E I + + L LDLS N +N ++ F ++ + +
Sbjct: 184 KNKIENIYHEHLQVLHQVPLHNLSLDLSLNPLNFIEPGAFNKIRLNGL 231
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 29/115 (25%), Positives = 58/115 (50%)
Query: 77 MGITNIQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIY--IPYLKSINLA 134
+G+ ++ L L+ ++ V AF +++L L+DNLL+T+P+ + + L+++NL
Sbjct: 198 LGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNLG 257
Query: 135 HNPIHQISSYSFQSTPGIRYIDMSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASL 189
N + ++ F + + + I + AF + + L LNGN+L L
Sbjct: 258 GNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVL 312
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C+C +V C +P+ + +DL N + +L + F + +
Sbjct: 25 ACPAACTCSHVERGCSVRCDRAGLQRVPQEFPCEAASIDLDRNGLRILGERAFGTL--PS 82
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+++L LR L F+ AF+G+ + EL L+ N
Sbjct: 83 LRRLSLRHNNLSFITPGAFKGLPRLAELRLAHN 115
Score = 93 (37.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 99 AFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
A RG+ N+ + + V S L+ + L+S++L N + + + +F + +
Sbjct: 172 ALRGLANLTHAHFERSRIEAVASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLL 231
Query: 157 MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+++ + T+ + AF G+ ++ TL L GN L S+ R W
Sbjct: 232 LNDNLLATLPAAAFRGLRRLRTLNLGGNALGSVA-RAW 268
>UNIPROTKB|G3N218 [details] [associations]
symbol:G3N218 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:DAAA02073610
Ensembl:ENSBTAT00000066321 Uniprot:G3N218
Length = 478
Score = 103 (41.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 22 SCPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQKEIFLQMGITN 81
+CP C C + +V C +P + +DL N + L + F + +
Sbjct: 26 ACPAACVCSSVERRCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGTL--PS 83
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDN 114
+++L LR L F+ AF+G+ + EL L+ N
Sbjct: 84 LRRLSLRHNNLSFITPGAFKGLPRLAELSLAHN 116
Score = 99 (39.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 99 AFRGVTNMDELDLSDNLLSTVPS--LIYIPYLKSINLAHNPIHQISSYSFQSTPGIRYID 156
A RG+ N+ L + + V S L+ + L+S++L N + + +F+ + ++
Sbjct: 173 ALRGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRVRAVHGGAFRDCSALEHLL 232
Query: 157 MSNCQIHTIYSEAFYGIDKIDTLKLNGNKLASLKPRTW 194
+++ + + ++AF G+ ++ TL L GN L + R W
Sbjct: 233 LNDNLLAALPADAFLGLRRLRTLNLGGNALGRVV-RAW 269
>MGI|MGI:2685352 [details] [associations]
symbol:Podnl1 "podocan-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685352
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00600000084286
HSSP:P07359 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 CTD:79883 EMBL:DQ303463 EMBL:BC063764
IPI:IPI00420321 RefSeq:NP_001013402.2 UniGene:Mm.334654
ProteinModelPortal:Q6P3Y9 SMR:Q6P3Y9 PhosphoSite:Q6P3Y9
PRIDE:Q6P3Y9 Ensembl:ENSMUST00000093380 GeneID:244550
KEGG:mmu:244550 UCSC:uc012gha.1 InParanoid:Q6P3Y9 NextBio:386307
Bgee:Q6P3Y9 CleanEx:MM_PODNL1 Genevestigator:Q6P3Y9 Uniprot:Q6P3Y9
Length = 568
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 45/173 (26%), Positives = 79/173 (45%)
Query: 23 CPLGCSCKWKAGKRTVECIDRNFYTIPEGIDLDTQVLDLSSNNINVLQ-KEIFLQMGITN 81
CP CSC TV+C + P+ I + L L +N + L E+ G+
Sbjct: 39 CPWRCSCP---RDDTVDCAGLDLRIFPDNITRAARHLSLQNNQLRELPYNELSRLSGLRT 95
Query: 82 IQKLYLRKCKLEFVDDRAFRGVTNMDELDLSDNLLSTVPSLIYIPY-LKSINLAHNPIHQ 140
+ L+ E + D AF + ++ ++ N LS P ++P L+ +LA N + +
Sbjct: 96 LD-LHSNLITSEGLPDEAFESLNQLENFYVAHNKLSVAPQ--FLPRSLRVADLAANEVVE 152
Query: 141 ISSYSFQSTPGIRYIDMSNCQIHT--IYSEAFYGIDKIDTLKLNGNKLASLKP 191
I +F P +R + + N ++ + F+G + I TL L+ N+L+ L P
Sbjct: 153 IFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGSEVITTLSLSSNQLSYLPP 205
Score = 112 (44.5 bits), Expect = 0.00054, P = 0.00054
Identities = 39/150 (26%), Positives = 75/150 (50%)
Query: 48 IPEGIDLDTQVLDLSSNNINVLQK-EIFLQMGITNIQKLYLRKCKL--EFVDDRAFRGVT 104
+P + + L L +N I+ + + + LQ T++++LYL+ +L +D F ++
Sbjct: 203 LPPSLPASLERLHLQNNLISKVPRGALSLQ---THLRELYLQHNQLTDSGLDATTFSKLS 259
Query: 105 NMDELDLSDNLLSTVPSLIYIP-YLKSINLAHNPIHQISSYSFQSTPGIRYIDMSNCQI- 162
+++ LDLS N L+TVP +P L ++L N I + + G+RY+ + + ++
Sbjct: 260 SLEYLDLSHNQLATVPE--GLPGTLTILHLGRNCIRHVEAVRLHKARGLRYLLLQHNKLG 317
Query: 163 -HTIYSEAFYGIDKIDTLKLNGNKLASLKP 191
+ + + TL L GNKL + P
Sbjct: 318 ASALPKGTLRPLRALHTLHLYGNKLERVPP 347
WARNING: HSPs involving 379 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 195 195 0.00078 111 3 11 22 0.42 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 629
No. of states in DFA: 599 (64 KB)
Total size of DFA: 165 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.28u 0.06s 19.34t Elapsed: 00:00:08
Total cpu time: 19.37u 0.07s 19.44t Elapsed: 00:00:20
Start: Thu Aug 15 11:11:23 2013 End: Thu Aug 15 11:11:43 2013
WARNINGS ISSUED: 2