Your job contains 1 sequence.
>psy14768
GREAPGTVTNITPPLLLSPAESESTRSKKLLEPLNTQAVDLAEDAGDGSKSNSPSPARAR
RSRKNCAETYAHKHINALPARELCKSNSPSPRASVIGFEPRPSDAETVLKILVIGDSTVG
KTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPYGTFSPIQTPSYLILITGDST
VGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIYCTLSPIQIPT
YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA
GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS
KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE
RKSSIRLSEETLRDDQPKKLVPADKVSTYCWC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14768
(452 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|O14966 - symbol:RAB7L1 "Ras-related protein Rab... 410 2.6e-38 1
UNIPROTKB|F1P9G2 - symbol:RAB7L1 "Uncharacterized protein... 410 2.6e-38 1
UNIPROTKB|I3LHE8 - symbol:RAB7L1 "Uncharacterized protein... 409 3.4e-38 1
UNIPROTKB|F1N9R7 - symbol:RAB7L1 "Uncharacterized protein... 409 3.4e-38 1
UNIPROTKB|A5PJV4 - symbol:RAB7L1 "RAB7L1 protein" species... 408 4.3e-38 1
UNIPROTKB|Q13637 - symbol:RAB32 "Ras-related protein Rab-... 396 8.0e-37 1
MGI|MGI:2385107 - symbol:Rab7l1 "RAB7, member RAS oncogen... 393 1.7e-36 1
RGD|620892 - symbol:Rab7l1 "RAB7, member RAS oncogene fam... 393 1.7e-36 1
UNIPROTKB|F1S747 - symbol:RAB32 "Ras-related protein Rab-... 390 3.5e-36 1
UNIPROTKB|Q06AU5 - symbol:RAB32 "Ras-related protein Rab-... 388 5.7e-36 1
UNIPROTKB|E1BA60 - symbol:RAB32 "Uncharacterized protein"... 380 4.0e-35 1
UNIPROTKB|F1NBL3 - symbol:RAB32 "Uncharacterized protein"... 380 4.0e-35 1
RGD|1559997 - symbol:Rab32 "RAB32, member RAS oncogene fa... 377 8.3e-35 1
ZFIN|ZDB-GENE-091204-345 - symbol:rab38b "RAB38b, member ... 376 1.1e-34 1
ZFIN|ZDB-GENE-090821-8 - symbol:rab38a "RAB38a, member RA... 373 2.2e-34 1
MGI|MGI:1915094 - symbol:Rab32 "RAB32, member RAS oncogen... 371 3.6e-34 1
FB|FBgn0002567 - symbol:ltd "lightoid" species:7227 "Dros... 358 4.0e-34 2
DICTYBASE|DDB_G0283603 - symbol:rab32A "Rab GTPase" speci... 367 9.5e-34 1
UNIPROTKB|F1PSK7 - symbol:RAB38 "Uncharacterized protein"... 367 9.5e-34 1
UNIPROTKB|E1C752 - symbol:RAB38 "Uncharacterized protein"... 367 9.5e-34 1
ZFIN|ZDB-GENE-031006-10 - symbol:rab32a "RAB32a, member R... 366 1.2e-33 1
UNIPROTKB|Q63483 - symbol:Rab38 "Protein Rab38" species:1... 362 3.2e-33 1
MGI|MGI:1919683 - symbol:Rab38 "RAB38, member of RAS onco... 360 5.2e-33 1
UNIPROTKB|P57729 - symbol:RAB38 "Ras-related protein Rab-... 360 5.2e-33 1
UNIPROTKB|F1STR2 - symbol:RAB38 "Uncharacterized protein"... 360 5.2e-33 1
WB|WBGene00011083 - symbol:glo-1 species:6239 "Caenorhabd... 355 1.8e-32 1
ZFIN|ZDB-GENE-070424-24 - symbol:zgc:162171 "zgc:162171" ... 352 3.7e-32 1
ZFIN|ZDB-GENE-090821-4 - symbol:rab32b "RAB32b, member RA... 351 4.7e-32 1
ZFIN|ZDB-GENE-091118-91 - symbol:si:ch73-173m3.3 "si:ch73... 351 4.7e-32 1
UNIPROTKB|E1B9C0 - symbol:RAB38 "Uncharacterized protein"... 347 1.3e-31 1
DICTYBASE|DDB_G0269416 - symbol:rab32B "Rab GTPase" speci... 340 6.9e-31 1
DICTYBASE|DDB_G0275675 - symbol:rab32C "Rab GTPase" speci... 312 6.4e-28 1
UNIPROTKB|E2RRA2 - symbol:RAB19 "Uncharacterized protein"... 303 5.7e-27 1
ZFIN|ZDB-GENE-060825-25 - symbol:zgc:153788 "zgc:153788" ... 303 5.7e-27 1
ZFIN|ZDB-GENE-061215-104 - symbol:rab39b "RAB39B, member ... 291 1.3e-25 1
UNIPROTKB|E1C105 - symbol:RAB3C "Uncharacterized protein"... 289 2.3e-25 1
UNIPROTKB|Q1RMR4 - symbol:RAB15 "Ras-related protein Rab-... 289 2.3e-25 1
UNIPROTKB|P59190 - symbol:RAB15 "Ras-related protein Rab-... 287 3.8e-25 1
MGI|MGI:1916865 - symbol:Rab15 "RAB15, member RAS oncogen... 287 3.8e-25 1
UNIPROTKB|Q3ZC27 - symbol:RAB19 "Ras-related protein Rab-... 286 5.1e-25 1
UNIPROTKB|F1P278 - symbol:RAB19 "Uncharacterized protein"... 286 5.1e-25 1
ZFIN|ZDB-GENE-040718-428 - symbol:rab3db "RAB3D, member R... 286 5.1e-25 1
UNIPROTKB|A4D1S5 - symbol:RAB19 "Ras-related protein Rab-... 284 8.9e-25 1
ZFIN|ZDB-GENE-041210-268 - symbol:rab3ab "RAB3A, member R... 283 1.2e-24 1
RGD|735172 - symbol:Rab15 "RAB15, member RAS oncogene fam... 283 1.2e-24 1
DICTYBASE|DDB_G0285051 - symbol:rab32D "Rab GTPase" speci... 283 1.2e-24 1
ZFIN|ZDB-GENE-040801-62 - symbol:rab35 "RAB35, member RAS... 282 1.5e-24 1
UNIPROTKB|Q17QU4 - symbol:RAB39B "Ras-related protein Rab... 282 1.5e-24 1
UNIPROTKB|Q96DA2 - symbol:RAB39B "Ras-related protein Rab... 282 1.5e-24 1
UNIPROTKB|F2Z552 - symbol:LOC100516775 "Uncharacterized p... 282 1.5e-24 1
MGI|MGI:1915040 - symbol:Rab39b "RAB39B, member RAS oncog... 282 1.5e-24 1
ZFIN|ZDB-GENE-070620-7 - symbol:zgc:165464 "zgc:165464" s... 282 1.5e-24 1
UNIPROTKB|E1BF18 - symbol:RAB3C "Ras-related protein Rab-... 282 1.5e-24 1
UNIPROTKB|E2QSW2 - symbol:RAB3C "Uncharacterized protein"... 282 1.5e-24 1
UNIPROTKB|E2RC93 - symbol:RAB3C "Uncharacterized protein"... 282 1.5e-24 1
MGI|MGI:1914545 - symbol:Rab3c "RAB3C, member RAS oncogen... 282 1.5e-24 1
RGD|620923 - symbol:Rab3c "RAB3C, member RAS oncogene fam... 282 1.5e-24 1
UNIPROTKB|P20337 - symbol:RAB3B "Ras-related protein Rab-... 281 2.0e-24 1
UNIPROTKB|P10949 - symbol:RAB3C "Ras-related protein Rab-... 281 2.0e-24 1
UNIPROTKB|Q96E17 - symbol:RAB3C "Ras-related protein Rab-... 281 2.0e-24 1
UNIPROTKB|F1SLJ0 - symbol:RAB3C "Uncharacterized protein"... 281 2.0e-24 1
UNIPROTKB|F1PWY4 - symbol:RAB3B "Uncharacterized protein"... 280 2.6e-24 1
UNIPROTKB|F1S6G3 - symbol:RAB3B "Uncharacterized protein"... 280 2.6e-24 1
ZFIN|ZDB-GENE-050208-660 - symbol:rab3b "RAB3B, member RA... 279 3.4e-24 1
ZFIN|ZDB-GENE-080722-14 - symbol:rab3da "RAB3D, member RA... 278 4.5e-24 1
UNIPROTKB|P10948 - symbol:RAB3B "Ras-related protein Rab-... 278 4.5e-24 1
UNIPROTKB|P11023 - symbol:RAB3A "Ras-related protein Rab-... 278 4.5e-24 1
UNIPROTKB|E2RIA5 - symbol:RAB3A "Uncharacterized protein"... 278 4.5e-24 1
UNIPROTKB|P20336 - symbol:RAB3A "Ras-related protein Rab-... 278 4.5e-24 1
UNIPROTKB|Q06AU3 - symbol:RAB3A "Ras-related protein Rab-... 278 4.5e-24 1
MGI|MGI:97843 - symbol:Rab3a "RAB3A, member RAS oncogene ... 278 4.5e-24 1
MGI|MGI:1917158 - symbol:Rab3b "RAB3B, member RAS oncogen... 278 4.5e-24 1
RGD|3528 - symbol:Rab3a "RAB3A, member RAS oncogene famil... 278 4.5e-24 1
ZFIN|ZDB-GENE-040704-16 - symbol:zgc:91909 "zgc:91909" sp... 277 5.8e-24 1
RGD|620922 - symbol:Rab3b "RAB3B, member RAS oncogene fam... 277 5.8e-24 1
UNIPROTKB|Q6P9W6 - symbol:Rab3b "Ras-related protein Rab-... 277 5.8e-24 1
ZFIN|ZDB-GENE-040801-2 - symbol:rab3aa "RAB3A, member RAS... 277 5.8e-24 1
FB|FBgn0015789 - symbol:Rab10 "Rab10" species:7227 "Droso... 277 5.8e-24 1
FB|FBgn0051118 - symbol:RabX4 "RabX4" species:7227 "Droso... 276 7.5e-24 1
WB|WBGene00004284 - symbol:rab-35 species:6239 "Caenorhab... 275 9.9e-24 1
UNIPROTKB|F1N908 - symbol:RAB35 "Uncharacterized protein"... 274 1.3e-23 1
UNIPROTKB|E1C8J9 - symbol:RAB3B "Uncharacterized protein"... 274 1.3e-23 1
UNIPROTKB|Q15286 - symbol:RAB35 "Ras-related protein Rab-... 273 1.7e-23 1
UNIPROTKB|F2Z4Z0 - symbol:RAB35 "Uncharacterized protein"... 273 1.7e-23 1
MGI|MGI:1924657 - symbol:Rab35 "RAB35, member RAS oncogen... 273 1.7e-23 1
RGD|1306362 - symbol:Rab35 "RAB35, member RAS oncogene fa... 273 1.7e-23 1
UNIPROTKB|I3LHP6 - symbol:RAB3B "Uncharacterized protein"... 273 1.7e-23 1
ZFIN|ZDB-GENE-040718-263 - symbol:rab3c "RAB3C, member RA... 273 1.7e-23 1
UNIPROTKB|Q3T0F5 - symbol:RAB7A "Ras-related protein Rab-... 272 2.2e-23 1
WB|WBGene00004278 - symbol:rab-19 species:6239 "Caenorhab... 272 2.2e-23 1
FB|FBgn0015793 - symbol:Rab19 "Rab19" species:7227 "Droso... 272 2.2e-23 1
UNIPROTKB|F1PDF8 - symbol:RAB39B "Uncharacterized protein... 272 2.2e-23 1
RGD|1565263 - symbol:Rab19 "RAB19, member RAS oncogene fa... 271 2.8e-23 1
UNIPROTKB|Q86YS6 - symbol:RAB43 "Ras-related protein Rab-... 271 2.8e-23 1
UNIPROTKB|F1S5W6 - symbol:RAB3D "Uncharacterized protein"... 271 2.8e-23 1
MGI|MGI:103292 - symbol:Rab19 "RAB19, member RAS oncogene... 270 3.7e-23 1
UNIPROTKB|F1MSJ9 - symbol:RAB35 "Uncharacterized protein"... 270 3.7e-23 1
FB|FBgn0025382 - symbol:Rab27 "Rab27" species:7227 "Droso... 270 3.7e-23 1
ZFIN|ZDB-GENE-040927-2 - symbol:zgc:100918 "zgc:100918" s... 269 4.8e-23 1
FB|FBgn0005586 - symbol:Rab3 "Rab3" species:7227 "Drosoph... 269 4.8e-23 1
WARNING: Descriptions of 1602 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|O14966 [details] [associations]
symbol:RAB7L1 "Ras-related protein Rab-7L1" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AC119673 HOGENOM:HOG000233968 EMBL:D84488 EMBL:AK308359
EMBL:AK303879 EMBL:BC002585 IPI:IPI00024775 IPI:IPI00909756
IPI:IPI00913930 RefSeq:NP_001129134.1 RefSeq:NP_001129135.1
RefSeq:NP_001129136.1 RefSeq:NP_003920.1 UniGene:Hs.115325
ProteinModelPortal:O14966 SMR:O14966 DIP:DIP-31215N IntAct:O14966
STRING:O14966 PhosphoSite:O14966 PaxDb:O14966 PRIDE:O14966
DNASU:8934 Ensembl:ENST00000235932 Ensembl:ENST00000367139
Ensembl:ENST00000414729 Ensembl:ENST00000437324
Ensembl:ENST00000446390 GeneID:8934 KEGG:hsa:8934 UCSC:uc001hde.4
CTD:8934 GeneCards:GC01M205738 HGNC:HGNC:9789 HPA:CAB020822
HPA:HPA026303 MIM:603949 neXtProt:NX_O14966 PharmGKB:PA34151
InParanoid:O14966 KO:K07916 OMA:GQERFIS OrthoDB:EOG4SN1PN
PhylomeDB:O14966 ChiTaRS:RAB7L1 GenomeRNAi:8934 NextBio:33592
ArrayExpress:O14966 Bgee:O14966 CleanEx:HS_RAB7L1
Genevestigator:O14966 GermOnline:ENSG00000117280 Uniprot:O14966
Length = 203
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 76/169 (44%), Positives = 114/169 (67%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L Y V+LQ+WDIA
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDY--EIVRLQLWDIA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ C+IMFD+TN +F + +WK DLDSK L NG +PCLLLA+
Sbjct: 66 GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
KCDL V ++I+ + F W E S KE+ I ++M L+++++
Sbjct: 126 KCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMM 174
Score = 147 (56.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L Y V+LQ+WDI
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDY--EIVRLQLWDI 64
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 108 VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKY 155
+ K+LV+GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L Y
Sbjct: 7 LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDY 54
>UNIPROTKB|F1P9G2 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AAEX03018265
Ensembl:ENSCAFT00000016170 Uniprot:F1P9G2
Length = 225
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 76/173 (43%), Positives = 115/173 (66%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDIA
Sbjct: 30 FKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSD--SEMVRLQLWDIA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ CIIMFD+TN +F + +WK DLDSK L NG +PCLLLA+
Sbjct: 88 GQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLAN 147
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
KCDL V ++++ + F W E S KE+ I ++M L+++++ + R
Sbjct: 148 KCDLSPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 200
Score = 142 (55.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDI
Sbjct: 30 FKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSD--SEMVRLQLWDI 86
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 85 KSNSPSPRASVIGFEPRPS--DAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVG 142
++ P+ A+ G E R + + + K+LV+GD+ VGKTS VQ + Q+ F +YK+TVG
Sbjct: 4 RAGRPTLAAAARGEEARRAMGGRDHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVG 63
Query: 143 VDFSTKLL 150
VDF+ K+L
Sbjct: 64 VDFALKVL 71
>UNIPROTKB|I3LHE8 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07916 OMA:GQERFIS
EMBL:FP565441 RefSeq:XP_003357447.1 RefSeq:XP_003357448.1
RefSeq:XP_003357449.1 Ensembl:ENSSSCT00000028022 GeneID:100626414
KEGG:ssc:100626414 Uniprot:I3LHE8
Length = 203
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 75/175 (42%), Positives = 116/175 (66%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDIA
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEVVRLQLWDIA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ C+IMFD+TN +F + +WK DLDSK L NG +PCLLLA+
Sbjct: 66 GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGGPVPCLLLAN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCDL V ++++ + F W E S KE+ I ++M L+++++ + + E
Sbjct: 126 KCDLSPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSKEE 180
Score = 141 (54.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDI
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEVVRLQLWDI 64
Score = 131 (51.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
S + + K+LV+GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVL 49
>UNIPROTKB|F1N9R7 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AADN02044935
IPI:IPI00603890 ProteinModelPortal:F1N9R7
Ensembl:ENSGALT00000001008 Uniprot:F1N9R7
Length = 193
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 75/171 (43%), Positives = 115/171 (67%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+TVGKTS VQ + + F +YK+TVGVDF+ K++ + V+LQ+WDIA
Sbjct: 22 FKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSE--SETVRLQLWDIA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+ + C+IMFD+TN +F + +WK DLDSK L +G+ +PCLLLA+
Sbjct: 80 GQERFTSMTRLYYREASACVIMFDVTNVSTFSNSQKWKQDLDSKLTLPDGSPVPCLLLAN 139
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICS 411
KCDL V E++ + F W+E S KE+ I +SM L+++++ S
Sbjct: 140 KCDLSPWAVTREEVDRFSKENGFSGWVETSVKENKNINESMRVLIEKMMSS 190
Score = 141 (54.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+TVGKTS VQ + + F +YK+TVGVDF+ K++ + V+LQ+WDI
Sbjct: 22 FKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSE--SETVRLQLWDI 78
Score = 129 (50.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 96 IGFEPRPSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
+G R + + K+LV+GD+TVGKTS VQ + + F +YK+TVGVDF+ K++
Sbjct: 9 LGGGGRMGQRDRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVV 63
>UNIPROTKB|A5PJV4 [details] [associations]
symbol:RAB7L1 "RAB7L1 protein" species:9913 "Bos taurus"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:8934 KO:K07916 OMA:GQERFIS
OrthoDB:EOG4SN1PN EMBL:DAAA02041949 EMBL:BC142252 IPI:IPI00712290
RefSeq:NP_001092564.1 UniGene:Bt.28513 Ensembl:ENSBTAT00000004192
GeneID:539000 KEGG:bta:539000 InParanoid:A5PJV4 NextBio:20877717
Uniprot:A5PJV4
Length = 203
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 75/173 (43%), Positives = 115/173 (66%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDIA
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDIA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ C+IMFD+TN +F + +WK DLDSK L NG +PCLLLA+
Sbjct: 66 GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLLAN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
KCDL V ++++ + F W E S KE+ I ++M L+++++ + R
Sbjct: 126 KCDLSPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
Score = 141 (54.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDI
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDI 64
Score = 131 (51.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
S + + K+LV+GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L
Sbjct: 2 SSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVL 49
>UNIPROTKB|Q13637 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090382 "phagosome maturation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:U71127 EMBL:AF498958 EMBL:BT020016
EMBL:AL133539 EMBL:BC015061 EMBL:U59878 IPI:IPI00014377
RefSeq:NP_006825.1 UniGene:Hs.287714 ProteinModelPortal:Q13637
SMR:Q13637 STRING:Q13637 PhosphoSite:Q13637 DMDM:2833245
PaxDb:Q13637 PRIDE:Q13637 DNASU:10981 Ensembl:ENST00000367495
GeneID:10981 KEGG:hsa:10981 UCSC:uc003qln.1 CTD:10981
GeneCards:GC06P146906 HGNC:HGNC:9772 HPA:HPA025731 MIM:612906
neXtProt:NX_Q13637 PharmGKB:PA34123 InParanoid:Q13637 KO:K07918
OMA:FCREGGF OrthoDB:EOG4F7NM0 PhylomeDB:Q13637 GenomeRNAi:10981
NextBio:41722 Bgee:Q13637 CleanEx:HS_RAB32 Genevestigator:Q13637
GermOnline:ENSG00000118508 Uniprot:Q13637
Length = 225
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 78/198 (39%), Positives = 132/198 (66%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 82
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G ++FD++ +FE+V++WK DLDSK L NG+ +P +LLA
Sbjct: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142
Query: 360 SKCDL-PDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRM---E 415
+KCD D ++++ C ++ F W E S+K+++ IE++ FLV++I+ + + E
Sbjct: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNE 202
Query: 416 EEAVERKSSIRLSEETLR 433
E V++ I+L +ETLR
Sbjct: 203 ENDVDK---IKLDQETLR 217
Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 100 PRPSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P P E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 68
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 229
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 82
>MGI|MGI:2385107 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2385107
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4SN1PN EMBL:BC016133 EMBL:BC029056
IPI:IPI00130361 UniGene:Mm.34027 ProteinModelPortal:Q91YQ1
SMR:Q91YQ1 STRING:Q91YQ1 PhosphoSite:Q91YQ1 PaxDb:Q91YQ1
PRIDE:Q91YQ1 InParanoid:Q91YQ1 CleanEx:MM_RAB7L1
Genevestigator:Q91YQ1 GermOnline:ENSMUSG00000026433 Uniprot:Q91YQ1
Length = 204
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/173 (43%), Positives = 114/173 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDIA
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDIA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ C+IMFD+TN +F + +WK DLDSK L +G +PCLLLA+
Sbjct: 66 GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLAN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
K DL V ++I+ + F W E S KE+ I ++M LV++++ + R
Sbjct: 126 KSDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
Score = 141 (54.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDI
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDI 64
Score = 128 (50.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 108 VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
+ K+LV+GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L
Sbjct: 7 LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVL 49
>RGD|620892 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620892 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419
HOVERGEN:HBG009351 HSSP:P51151 CTD:8934 KO:K07916 EMBL:X96663
IPI:IPI00209145 RefSeq:NP_598274.1 UniGene:Rn.4323
ProteinModelPortal:Q63481 GeneID:171122 KEGG:rno:171122
NextBio:621866 Genevestigator:Q63481 Uniprot:Q63481
Length = 204
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/173 (43%), Positives = 114/173 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDIA
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDIA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+R+YY+++ C+IMFD+TN +F + +WK DLDSK L +G +PCLLLA+
Sbjct: 66 GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLAN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
K DL V ++I+ + F W E S KE+ I ++M LV++++ + R
Sbjct: 126 KSDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
Score = 141 (54.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L V+LQ+WDI
Sbjct: 8 FKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSD--SEMVRLQLWDI 64
Score = 128 (50.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 108 VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
+ K+LV+GD+ VGKTS VQ + Q+ F +YK+TVGVDF+ K+L
Sbjct: 7 LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVL 49
>UNIPROTKB|F1S747 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:CU856012 Ensembl:ENSSSCT00000004552 Uniprot:F1S747
Length = 226
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 74/197 (37%), Positives = 131/197 (66%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 84
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G +++FD++ +FE+V++WK+DLDSK L NG+ +P +LLA
Sbjct: 85 AGQERFGNMTRVYYKEAVGALVVFDISRGSTFEAVLKWKNDLDSKVHLPNGSPIPAVLLA 144
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD D ++++ C ++ F W E S+K+++ I+++ FLV+ I+ + + +
Sbjct: 145 NKCDQKKDSGQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ-SFPS 203
Query: 419 VERKSSIRLSEETLRDD 435
E I+L EET++ +
Sbjct: 204 EENDGRIKLDEETMKKE 220
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 229
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 84
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 70
>UNIPROTKB|Q06AU5 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090382
"phagosome maturation" evidence=ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981 KO:K07918
OrthoDB:EOG4F7NM0 EMBL:DQ917630 RefSeq:NP_001116648.1
UniGene:Ssc.56282 ProteinModelPortal:Q06AU5 GeneID:100144496
KEGG:ssc:100144496 Uniprot:Q06AU5
Length = 226
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 74/197 (37%), Positives = 130/197 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 84
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G +++FD++ FE+V++WK+DLDSK L NG+ +P +LLA
Sbjct: 85 AGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPAVLLA 144
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD D ++++ C ++ F W E S+K+++ I+++ FLV+ I+ + + +
Sbjct: 145 NKCDQKKDSGQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ-SFPS 203
Query: 419 VERKSSIRLSEETLRDD 435
E I+L EET++ +
Sbjct: 204 EENDGRIKLDEETMKKE 220
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 229
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 84
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 70
>UNIPROTKB|E1BA60 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 CTD:10981 KO:K07918 OMA:FCREGGF
GeneTree:ENSGT00700000104228 EMBL:DAAA02026958 EMBL:DAAA02026959
EMBL:DAAA02026960 IPI:IPI00692503 RefSeq:NP_001192879.1
UniGene:Bt.15549 Ensembl:ENSBTAT00000012905 GeneID:528099
KEGG:bta:528099 NextBio:20874738 Uniprot:E1BA60
Length = 225
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 74/197 (37%), Positives = 128/197 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 27 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 83
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G I+FD++ +F++V++WK DLDSK L NG+ +P +LLA
Sbjct: 84 AGQERFGNMTRVYYKEAVGAFIVFDISRGSTFDAVLKWKSDLDSKVHLPNGSPIPAVLLA 143
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD D ++++ C ++ F W E S+K+++ I+++ FLV+ I+ + +
Sbjct: 144 NKCDQKKDSGQTPSQMDQFCKEHGFTGWFETSAKDNVNIDEAARFLVENILANHQSFPNE 203
Query: 419 VERKSSIRLSEETLRDD 435
E I+L EET++ +
Sbjct: 204 -ENDGRIKLEEETVKKE 219
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 164 SPIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP 221
+P +T +L +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R
Sbjct: 18 APPETSEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRT 74
Query: 222 -VKLQIWDI 229
V+LQ+WDI
Sbjct: 75 LVRLQLWDI 83
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P +E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 20 PETSEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 69
>UNIPROTKB|F1NBL3 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:AADN02025319 IPI:IPI00586938 ProteinModelPortal:F1NBL3
Ensembl:ENSGALT00000020101 Uniprot:F1NBL3
Length = 227
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 68/172 (39%), Positives = 117/172 (68%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+++ V+LQ+WDIA
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSK--TLVRLQLWDIA 85
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G ++FD+T +FE+V +WKHDLDSK +L NG+ +P +LLA+
Sbjct: 86 GQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPNGSPIPAVLLAN 145
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICS 411
KCD D +++++ C + F+ W E S+K+++ I+++ FLV+ I+ +
Sbjct: 146 KCDQKKDGSQNLSQMDQFCREGGFIGWFETSAKDNINIDEAARFLVENILAN 197
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 92 RASVIGFE-PRPSDAET---VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFST 147
RAS+ G E P AE+ + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+
Sbjct: 7 RASMAGGEGPVSGVAESREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL 66
Query: 148 KLLS 151
K+++
Sbjct: 67 KVIN 70
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+++ V+LQ+WDI
Sbjct: 28 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSK--TLVRLQLWDI 84
>RGD|1559997 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0090382 "phagosome maturation" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1559997 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
CTD:10981 KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0
GeneTree:ENSGT00700000104228 EMBL:CH473994 IPI:IPI00360584
RefSeq:NP_001102372.1 UniGene:Rn.167294 Ensembl:ENSRNOT00000019121
GeneID:365042 KEGG:rno:365042 UCSC:RGD:1559997 NextBio:686539
Uniprot:D4AEG2
Length = 223
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 72/193 (37%), Positives = 127/193 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F NY+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 24 FKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLN---WDSRTLVRLQLWDI 80
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G ++FD++ +F++V++WK+DLDSK L NG+ +P +LLA
Sbjct: 81 AGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLA 140
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR-MEEE 417
+KCD D +++ C + F+ W E S+K+++ I+++ FLV+ ++ +++ E
Sbjct: 141 NKCDQKKDSSQSPSQMNQFCKDHGFIGWFETSAKDNINIDEATRFLVENMLANQQSFPRE 200
Query: 418 AVERKSSIRLSEE 430
++ I+L EE
Sbjct: 201 EIDM-DKIKLVEE 212
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 229
+ +L+ G+ VGKTS ++ +V F NY+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 24 FKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLN---WDSRTLVRLQLWDI 80
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P E + K+LVIG+ VGKTS ++ +V F NY+ T+GVDF+ K+L+
Sbjct: 17 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLN 66
>ZFIN|ZDB-GENE-091204-345 [details] [associations]
symbol:rab38b "RAB38b, member of RAS oncogene
family" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-091204-345
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CABZ01031628 EMBL:CT573197
IPI:IPI00832591 ProteinModelPortal:E7F5L3
Ensembl:ENSDART00000100438 Bgee:E7F5L3 Uniprot:E7F5L3
Length = 213
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 78/178 (43%), Positives = 115/178 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y IL+ GD VGKTS ++ +V + NY+ T+GVDF+ K+L+ + V+LQ+WDIA
Sbjct: 10 YKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLN---WDSETVRLQLWDIA 66
Query: 301 ---GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLL 357
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK DLDSK IL NG + +L
Sbjct: 67 APEGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVSKWKEDLDSKLILSNGQSIATVL 126
Query: 358 LASKCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
LA+KCD +R N +++ C + F+ W E S+KE++ I D+ NFLV II S+
Sbjct: 127 LANKCD-QNRDFLTNNGLKMDQYCRENGFVGWFETSAKENVNINDAANFLVKHIIASE 183
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y IL+ GD VGKTS ++ +V + NY+ T+GVDF+ K+L+ + V+LQ+WDI
Sbjct: 10 YKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLN---WDSETVRLQLWDI 65
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
E + KILVIGD VGKTS ++ +V + NY+ T+GVDF+ K+L+
Sbjct: 7 EHLYKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLN 52
>ZFIN|ZDB-GENE-090821-8 [details] [associations]
symbol:rab38a "RAB38a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-090821-8 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 OrthoDB:EOG49GKHH EMBL:CABZ01044959
EMBL:CABZ01044960 EMBL:BC150365 IPI:IPI00511295 UniGene:Dr.141623
Ensembl:ENSDART00000040125 OMA:NIDEAAH Uniprot:A7E2I6
Length = 202
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 75/175 (42%), Positives = 114/175 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y IL+ GD VGKTS ++ +V F NY+ T+GVDF+ K+L+ + V+LQ+WDIA
Sbjct: 2 YKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQ---ETVRLQLWDIA 58
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK DLD+K L NG + +LLA+
Sbjct: 59 GQERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLAN 118
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD R V N ++E C + F+ W E S+KE++ I+++ + LV II ++
Sbjct: 119 KCD-QGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANE 172
Score = 133 (51.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y IL+ GD VGKTS ++ +V F NY+ T+GVDF+ K+L+ + V+LQ+WDI
Sbjct: 2 YKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQ---ETVRLQLWDI 57
Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 110 KILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
KILVIGD VGKTS ++ +V F NY+ T+GVDF+ K+L+
Sbjct: 3 KILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLN 44
>MGI|MGI:1915094 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1915094 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981
KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0 EMBL:AY135650 EMBL:AK012701
EMBL:AK078874 EMBL:AK088661 EMBL:AK151543 EMBL:AK159102
EMBL:AK163620 EMBL:BC016409 EMBL:BC055945 IPI:IPI00112587
RefSeq:NP_080681.1 UniGene:Mm.31486 ProteinModelPortal:Q9CZE3
SMR:Q9CZE3 STRING:Q9CZE3 PhosphoSite:Q9CZE3 PaxDb:Q9CZE3
PRIDE:Q9CZE3 Ensembl:ENSMUST00000019974 GeneID:67844 KEGG:mmu:67844
GeneTree:ENSGT00700000104228 InParanoid:Q9CZE3 NextBio:325691
Bgee:Q9CZE3 CleanEx:MM_RAB32 Genevestigator:Q9CZE3
GermOnline:ENSMUSG00000019832 Uniprot:Q9CZE3
Length = 223
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 71/193 (36%), Positives = 127/193 (65%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDI 299
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ + R V+LQ+WDI
Sbjct: 24 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDSRTLVRLQLWDI 80
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ M+RVYY+ + G ++FD++ +F++V++WK+DLDSK L NG+ +P +LLA
Sbjct: 81 AGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLA 140
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR-MEEE 417
+KCD D ++++ C + F W E S+K+++ I+++ FLV+ ++ +++ E
Sbjct: 141 NKCDQKKDNSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENMLANQQSFPSE 200
Query: 418 AVERKSSIRLSEE 430
++ I+L EE
Sbjct: 201 EIDL-DRIKLVEE 212
Score = 119 (46.9 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 162 TFSPIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGG 219
T +P +T +L +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ +
Sbjct: 14 TAAP-ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN---WDS 69
Query: 220 RP-VKLQIWDI 229
R V+LQ+WDI
Sbjct: 70 RTLVRLQLWDI 80
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
P E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 17 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 66
>FB|FBgn0002567 [details] [associations]
symbol:ltd "lightoid" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0007611 "learning or
memory" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0008057 "eye
pigment granule organization" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 EMBL:AE013599
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0008355
GO:GO:0015031 GO:GO:0003924 GO:GO:0008057 GO:GO:0006727
GO:GO:0006856 KO:K07918 GeneTree:ENSGT00700000104228
UniGene:Dm.2179 GeneID:35940 KEGG:dme:Dmel_CG8024 CTD:35940
FlyBase:FBgn0002567 ChiTaRS:ltd GenomeRNAi:35940 NextBio:795956
RefSeq:NP_525109.1 ProteinModelPortal:A1Z7S3 SMR:A1Z7S3
STRING:A1Z7S3 PRIDE:A1Z7S3 EnsemblMetazoa:FBtr0089931
UCSC:CG8024-RB InParanoid:A1Z7S3 OMA:DTPPRER PhylomeDB:A1Z7S3
Bgee:A1Z7S3 Uniprot:A1Z7S3
Length = 686
Score = 358 (131.1 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 68/176 (38%), Positives = 114/176 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y IL+ G+ GKTS+++ +V F NY+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWD--ANTIVRLQLWDIA 541
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +F+ V +WK DLDSK L +G+ +PC+LLA+
Sbjct: 542 GQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLAN 601
Query: 361 KCDLPDRQV--EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRM 414
KCD + + + +++ + F W E S+KE++ I+++ LV++I+ + ++
Sbjct: 602 KCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 657
Score = 125 (49.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y IL+ G+ GKTS+++ +V F NY+ T+GVDF+ K+L V+LQ+WDI
Sbjct: 484 YKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWD--ANTIVRLQLWDI 540
Score = 43 (20.2 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 81 RELCKSNSPSPRASVIGFEPRPSDAETVLKILVIGDSTVGKT 122
REL KS R++ + P + E V + +GKT
Sbjct: 67 RELDKSTDRETRSAEEEAQETPGELEDVASSISTDSGALGKT 108
>DICTYBASE|DDB_G0283603 [details] [associations]
symbol:rab32A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0283603
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:FCREGGF HSSP:P35288
EMBL:AF116859 RefSeq:XP_638960.1 ProteinModelPortal:Q54QR3
PRIDE:Q54QR3 EnsemblProtists:DDB0201639 GeneID:8624206
KEGG:ddi:DDB_G0283603 ProtClustDB:CLSZ2430347 Uniprot:Q54QR3
Length = 219
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 75/183 (40%), Positives = 116/183 (63%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y IL+ GD GKTS ++ FV N F +YK+T+GVDF+ K+++ V+LQ+WDIA
Sbjct: 16 YKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPK--TEVRLQLWDIA 73
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD-NGAMLPCLLLA 359
GQ+R+ M+RVYY+ + G +I FD+T +FE+V +WK D+DSK + +P +LLA
Sbjct: 74 GQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLLA 133
Query: 360 SKCDL-PDRQVEI-NEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
+KCDL D ++ N+++ C F+ W E S+KE++ IE + FLVD I+ + +
Sbjct: 134 NKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKNDVRRNQ 193
Query: 418 AVE 420
+E
Sbjct: 194 PIE 196
Score = 131 (51.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y IL+ GD GKTS ++ FV N F +YK+T+GVDF+ K+++ V+LQ+WDI
Sbjct: 16 YKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPK--TEVRLQLWDI 72
Score = 119 (46.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
E + KILV+GD GKTS ++ FV N F +YK+T+GVDF+ K+++
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVIN 58
>UNIPROTKB|F1PSK7 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:TKWKNDL EMBL:AAEX03012742
Ensembl:ENSCAFT00000007057 Uniprot:F1PSK7
Length = 229
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 79/205 (38%), Positives = 127/205 (61%)
Query: 219 GRPVKLQIWDIYCTLSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFS 278
GRP ++Q +P + Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+
Sbjct: 14 GRPARMQ--------APHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFA 65
Query: 279 TKLLSHKKYGGRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWK 338
K+L V+LQ+WDIAGQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK
Sbjct: 66 LKVLHWDPE--TVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWK 123
Query: 339 HDLDSKCILDNGAMLPCLLLASKCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHL 395
+DLDSK L NG + +LLA+KCD + V IN +++ C ++ F+ W E S+KE++
Sbjct: 124 NDLDSKLSLPNGKPVSVVLLANKCD-QGKDVLINNGLKMDQFCKEHGFVGWFETSAKENI 182
Query: 396 MIEDSMNFLVDRIICSKRMEEEAVE 420
I+++ LV I+ ++ E++E
Sbjct: 183 NIDEASRCLVKHILANECDLMESIE 207
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 157 GRPYGTFSPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKK 216
GRP +P + Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 14 GRPARMQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDP 73
Query: 217 YGGRPVKLQIWDI 229
V+LQ+WDI
Sbjct: 74 E--TVVRLQLWDI 84
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 25 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 69
>UNIPROTKB|E1C752 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923
OMA:TKWKNDL EMBL:AADN02004804 IPI:IPI00572853 RefSeq:XP_425653.2
ProteinModelPortal:E1C752 Ensembl:ENSGALT00000027870 GeneID:428095
KEGG:gga:428095 NextBio:20829169 Uniprot:E1C752
Length = 212
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 75/183 (40%), Positives = 116/183 (63%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+LS V+LQ+WDIA
Sbjct: 11 YKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWD--AETVVRLQLWDIA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK DLDSK +L NG +P +LLA+
Sbjct: 69 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVLPNGKPVPTVLLAN 128
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD V +N +++ C + F+ W E S+KE++ I ++ LV II ++ +
Sbjct: 129 KCD-QGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIATESDPVQ 187
Query: 418 AVE 420
+E
Sbjct: 188 PIE 190
Score = 127 (49.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+LS V+LQ+WDI
Sbjct: 11 YKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWD--AETVVRLQLWDI 67
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+LS
Sbjct: 8 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLS 53
>ZFIN|ZDB-GENE-031006-10 [details] [associations]
symbol:rab32a "RAB32a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-031006-10 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
KO:K07918 HSSP:P32939 EMBL:BC049531 IPI:IPI00484351
RefSeq:NP_958489.1 UniGene:Dr.119612 ProteinModelPortal:Q7ZW88
STRING:Q7ZW88 GeneID:378969 KEGG:dre:378969 CTD:378969
InParanoid:Q7ZW88 NextBio:20813911 ArrayExpress:Q7ZW88
Uniprot:Q7ZW88
Length = 213
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 72/192 (37%), Positives = 119/192 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+ V+LQ+WDIA
Sbjct: 14 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSK--TLVRLQLWDIA 71
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WKHDLD+K L NG +P +LLA+
Sbjct: 72 GQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDTKVKLANGNPIPSVLLAN 131
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD D + ++ C + F+ W E S+KE++ ++++ FLV+ I+ + +
Sbjct: 132 KCDQKKDGSNNSSLMDNFCKEAGFLGWFETSAKENINVDEAARFLVENILLNDKGLPYEE 191
Query: 420 ERKSSIRLSEET 431
I+L +T
Sbjct: 192 NNGDKIKLDHQT 203
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 161 GTFSPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGR 220
G+ S + + +L+ G+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 4 GSVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSK--T 61
Query: 221 PVKLQIWDI 229
V+LQ+WDI
Sbjct: 62 LVRLQLWDI 70
Score = 111 (44.1 bits), Expect = 0.00067, P = 0.00067
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
E + K+LVIG+ VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 11 EYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLN 56
>UNIPROTKB|Q63483 [details] [associations]
symbol:Rab38 "Protein Rab38" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 EMBL:M94043 RGD:628752 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH473956
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH HSSP:Q26000 EMBL:BC070513 IPI:IPI00209151
RefSeq:NP_665717.1 UniGene:Rn.9824 STRING:Q63483
Ensembl:ENSRNOT00000022538 GeneID:252916 KEGG:rno:252916
InParanoid:Q63483 NextBio:624045 Genevestigator:Q63483
Uniprot:Q63483
Length = 211
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 73/183 (39%), Positives = 118/183 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDIA 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK+DLDSK L NG + +LLA+
Sbjct: 68 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLAN 127
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD + V +N +++ C ++ F+ W E S+KE++ I+++ LV I+ ++ E
Sbjct: 128 KCD-QGKDVLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDFIE 186
Query: 418 AVE 420
++E
Sbjct: 187 SIE 189
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 166 IQTPS----YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP 221
+QTP Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 1 MQTPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TV 58
Query: 222 VKLQIWDI 229
V+LQ+WDI
Sbjct: 59 VRLQLWDI 66
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 51
>MGI|MGI:1919683 [details] [associations]
symbol:Rab38 "RAB38, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006996 "organelle
organization" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031982
"vesicle" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0060155 "platelet dense granule organization"
evidence=ISO] [GO:0090383 "phagosome acidification" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1919683
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH EMBL:AY062237 EMBL:AF448443 EMBL:AF448441
EMBL:AF448442 EMBL:AK009296 EMBL:AK044783 EMBL:AK054253
IPI:IPI00154087 RefSeq:NP_082514.4 UniGene:Mm.276669
ProteinModelPortal:Q8QZZ8 SMR:Q8QZZ8 IntAct:Q8QZZ8 STRING:Q8QZZ8
PhosphoSite:Q8QZZ8 PaxDb:Q8QZZ8 PRIDE:Q8QZZ8
Ensembl:ENSMUST00000107256 GeneID:72433 KEGG:mmu:72433
InParanoid:Q8QZZ8 NextBio:336246 Bgee:Q8QZZ8 CleanEx:MM_RAB38
Genevestigator:Q8QZZ8 GermOnline:ENSMUSG00000030559 Uniprot:Q8QZZ8
Length = 211
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 73/183 (39%), Positives = 118/183 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDIA 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK+DLDSK L NG + +LLA+
Sbjct: 68 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLAN 127
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD + V +N +++ C ++ F+ W E S+KE++ I+++ LV I+ ++ E
Sbjct: 128 KCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLLE 186
Query: 418 AVE 420
++E
Sbjct: 187 SIE 189
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 166 IQTPS----YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP 221
+QTP Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 1 MQTPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TV 58
Query: 222 VKLQIWDI 229
V+LQ+WDI
Sbjct: 59 VRLQLWDI 66
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 51
>UNIPROTKB|P57729 [details] [associations]
symbol:RAB38 "Ras-related protein Rab-38" species:9606
"Homo sapiens" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=NAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=NAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0015031 "protein transport" evidence=NAS] [GO:0003924 "GTPase
activity" evidence=NAS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=NAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AF235022 EMBL:BT009842
EMBL:DQ178619 EMBL:BC015808 IPI:IPI00939888 RefSeq:NP_071732.1
UniGene:Hs.591975 ProteinModelPortal:P57729 SMR:P57729
STRING:P57729 PhosphoSite:P57729 DMDM:12230516 PaxDb:P57729
PRIDE:P57729 DNASU:23682 Ensembl:ENST00000243662 GeneID:23682
KEGG:hsa:23682 UCSC:uc001pcj.2 CTD:23682 GeneCards:GC11M087846
HGNC:HGNC:9776 MIM:606281 neXtProt:NX_P57729 PharmGKB:PA34129
InParanoid:P57729 KO:K07923 OMA:TKWKNDL OrthoDB:EOG49GKHH
PhylomeDB:P57729 GenomeRNAi:23682 NextBio:46557 Bgee:P57729
CleanEx:HS_RAB38 Genevestigator:P57729 GermOnline:ENSG00000123892
Uniprot:P57729
Length = 211
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 73/183 (39%), Positives = 118/183 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDIA 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK+DLDSK L NG + +LLA+
Sbjct: 68 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLAN 127
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD + V +N +++ C ++ F+ W E S+KE++ I+++ LV I+ ++ E
Sbjct: 128 KCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLME 186
Query: 418 AVE 420
++E
Sbjct: 187 SIE 189
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 164 SPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVK 223
+P + Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+
Sbjct: 3 APHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVR 60
Query: 224 LQIWDI 229
LQ+WDI
Sbjct: 61 LQLWDI 66
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 51
>UNIPROTKB|F1STR2 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07923 OMA:TKWKNDL
EMBL:FP236293 RefSeq:XP_003482633.1 Ensembl:ENSSSCT00000016279
GeneID:100621853 KEGG:ssc:100621853 Uniprot:F1STR2
Length = 211
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 73/183 (39%), Positives = 118/183 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDIA 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK+DLDSK L NG + +LLA+
Sbjct: 68 GQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLLAN 127
Query: 361 KCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD + V +N +++ C ++ F+ W E S+KE++ I+++ LV I+ ++ E
Sbjct: 128 KCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLME 186
Query: 418 AVE 420
++E
Sbjct: 187 SIE 189
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDI
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDI 66
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 51
>WB|WBGene00011083 [details] [associations]
symbol:glo-1 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007040 "lysosome organization" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0005764 "lysosome"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005764 GO:GO:0007040 GO:GO:0019915 EMBL:Z48621 KO:K07976
GeneTree:ENSGT00700000104228 OMA:TKWKNDL EMBL:DQ016970
RefSeq:NP_001024837.1 UniGene:Cel.31333 ProteinModelPortal:G5EBF0
SMR:G5EBF0 EnsemblMetazoa:R07B1.12 GeneID:3565633
KEGG:cel:CELE_R07B1.12 CTD:3565633 WormBase:R07B1.12 NextBio:957237
Uniprot:G5EBF0
Length = 212
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 74/195 (37%), Positives = 120/195 (61%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
+Y +L+ GD VGKTS ++ FV N F NYK T+GVDF+ K+L + V LQIWDI
Sbjct: 11 SYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDE--NTVVHLQIWDI 68
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
+GQDRY M+RVYY+++ II+ D T ++ E ++WK DLD K L +G+ +P +LLA
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 360 SKCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
+KCD+ D ++ +++ + F+ S+KE + IE++ FL + +I +++ + V
Sbjct: 129 NKCDI-DNKLGDDKLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTVISTEQGGQYDV 187
Query: 420 ---ERKSSIRLSEET 431
R+ ++ L + T
Sbjct: 188 PFMNREGNVNLDDNT 202
Score = 148 (57.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 170 SYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
SY +L+ GD VGKTS ++ FV N F NYK T+GVDF+ K+L + V LQIWDI
Sbjct: 11 SYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDE--NTVVHLQIWDI 68
Score = 131 (51.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 110 KILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
K+LVIGD VGKTS ++ FV N F NYK T+GVDF+ K+L
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKIL 53
>ZFIN|ZDB-GENE-070424-24 [details] [associations]
symbol:zgc:162171 "zgc:162171" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070424-24 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104228 EMBL:AL954129
EMBL:BC133896 IPI:IPI00844931 RefSeq:NP_001076317.1
UniGene:Dr.103256 Ensembl:ENSDART00000101408 GeneID:565931
KEGG:dre:565931 InParanoid:A3KNK9 OMA:QAVLKWK NextBio:20887930
Uniprot:A3KNK9
Length = 224
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 74/185 (40%), Positives = 120/185 (64%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS--HKKYGGRPVKLQIWDIA 300
+L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L+ H+ V+LQ+WDIA
Sbjct: 9 VLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTV----VRLQLWDIA 64
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY M+RVYY+ + G +++FD+T +F++V++WK DLDSK L NG LP +LLA+
Sbjct: 65 GQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAVLLAN 124
Query: 361 KCDLPDRQV--EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
KCD + ++ ++E + F+ W E S+K++ I+ ++ LV+ I+ +EEE
Sbjct: 125 KCDQQRYGLCSKLPKLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMA---VEEEN 181
Query: 419 VERKS 423
V +S
Sbjct: 182 VPVES 186
Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
E +LK+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L+
Sbjct: 4 ERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLN 49
Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS--HKKYGGRPVKLQIWDI 229
+L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L+ H+ V+LQ+WDI
Sbjct: 9 VLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTV----VRLQLWDI 63
>ZFIN|ZDB-GENE-090821-4 [details] [associations]
symbol:rab32b "RAB32b, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-090821-4 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CABZ01057745 IPI:IPI00933856
ProteinModelPortal:F1R8U8 Ensembl:ENSDART00000060336 Bgee:F1R8U8
Uniprot:F1R8U8
Length = 218
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 69/194 (35%), Positives = 119/194 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD VGK+S+V+ +V+N+F + K ++GVDFS K++ + V+LQ+WDIA
Sbjct: 24 FKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAH--TRVRLQLWDIA 81
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R ++RVY++ S G +++DLTN S + + WK +LD + +L NG +P +LLA+
Sbjct: 82 GQERVRGLNRVYFRGSSGAFVVYDLTNGSSLDGALNWKRELDCQVMLKNGHPIPAVLLAN 141
Query: 361 KCD---LPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
KCD + R + +E +C + F + S+KE++ ++++ FLV I+ + EE
Sbjct: 142 KCDETKVSRRNASL--LEKLCQEKGFTGCFQTSAKENINVDEAAKFLVKHIL--QINEES 197
Query: 418 AVERKSSIRLSEET 431
E + I L +T
Sbjct: 198 MKEEEQKIHLKPQT 211
Score = 131 (51.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/59 (40%), Positives = 41/59 (69%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD VGK+S+V+ +V+N+F + K ++GVDFS K++ + V+LQ+WDI
Sbjct: 24 FKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAH--TRVRLQLWDI 80
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGK+S+V+ +V+N+F + K ++GVDFS K++
Sbjct: 21 EHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVI 65
>ZFIN|ZDB-GENE-091118-91 [details] [associations]
symbol:si:ch73-173m3.3 "si:ch73-173m3.3"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-091118-91 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CT025910 IPI:IPI00997692
ProteinModelPortal:F1QXT5 Ensembl:ENSDART00000109719 Uniprot:F1QXT5
Length = 217
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 70/171 (40%), Positives = 110/171 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 11 FKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQ--TVVRLQLWDIA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY M+RVYY+ + G +I+FD+T +F++V++WK DLD K L+NG +P +LLA+
Sbjct: 69 GQERYGNMTRVYYREAVGALIVFDVTRSSTFDAVLKWKDDLDLKVSLNNGKPVPAVLLAN 128
Query: 361 KCDLPDRQV--EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
K D + +I +++ C + F+ W E S+KE+ IE + LVD I+
Sbjct: 129 KSDQSREGLCSQIPKLDTFCKENGFVGWFETSAKENSNIEAAAKCLVDHIL 179
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
+ +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDI
Sbjct: 11 FKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQ--TVVRLQLWDI 67
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 8 EHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVL 52
>UNIPROTKB|E1B9C0 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 OMA:TKWKNDL
EMBL:DAAA02062489 IPI:IPI00823522 Ensembl:ENSBTAT00000020971
Uniprot:E1B9C0
Length = 213
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 71/177 (40%), Positives = 114/177 (64%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDIA
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDIA 67
Query: 301 --GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLL 358
GQ+R+ M+RVYY+ + G I+FD+T +FE+V +WK+DLDSK L NG + +LL
Sbjct: 68 VIGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 127
Query: 359 ASKCDLPDRQVEIN---EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
A+KCD + V +N +++ C ++ F+ W E S+KE++ I+++ LV I+ ++
Sbjct: 128 ANKCD-QGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 183
Score = 122 (48.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
Y +L+ GD VGKTS ++ +V F +Y+ T+GVDF+ K+L V+LQ+WDI
Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPE--TVVRLQLWDI 66
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
E + K+LVIGD VGKTS ++ +V F +Y+ T+GVDF+ K+L
Sbjct: 7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVL 51
>DICTYBASE|DDB_G0269416 [details] [associations]
symbol:rab32B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0269416 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P51151
RefSeq:XP_645950.1 ProteinModelPortal:Q55E31
EnsemblProtists:DDB0229397 GeneID:8616894 KEGG:ddi:DDB_G0269416
OMA:CKENNFI Uniprot:Q55E31
Length = 260
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 66/169 (39%), Positives = 104/169 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +L+ GD VGK+S ++ + F NYK T+GVDFS K + +K + V LQ+WDIA
Sbjct: 60 YKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEK--NKIVSLQLWDIA 117
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
G +R+ M+RVYY+ + II+FDL+ +F++V +W+ D++SK +L N +P LLLA+
Sbjct: 118 GHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLAN 177
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
K DL V+ ++ C + NF+ W S+ I ++M+FL I+
Sbjct: 178 KSDLSTSYVDSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEIL 226
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 166 IQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQ 225
I+ Y +L+ GD VGK+S ++ + F NYK T+GVDFS K + +K + V LQ
Sbjct: 55 IEKHLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEK--NKIVSLQ 112
Query: 226 IWDI 229
+WDI
Sbjct: 113 LWDI 116
>DICTYBASE|DDB_G0275675 [details] [associations]
symbol:rab32C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0275675 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 PROSITE:PS51419 eggNOG:COG1100 HSSP:Q9UL25
KO:K07976 RefSeq:XP_643480.1 ProteinModelPortal:Q8MXQ2 PRIDE:Q8MXQ2
EnsemblProtists:DDB0230000 GeneID:8620061 KEGG:ddi:DDB_G0275675
OMA:DEAISLK Uniprot:Q8MXQ2
Length = 224
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/183 (39%), Positives = 102/183 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
IL+ G GKTS +Q + N F YK T+GVDF K+L + G+ V LQ+WDIAGQ
Sbjct: 31 ILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVL---EIMGQKVLLQLWDIAGQ 87
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M+RVY+QN+ G +I+FD T +F WK D+D C N LP +LLA+KC
Sbjct: 88 ERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDY-CF--NNENLPTILLANKC 144
Query: 363 DLPDRQVEINE-IEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
DL E I C Q F + S+KE I +++ LV I+ S + +E++
Sbjct: 145 DLLTPPYTFPEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILESYQTQEQSTGF 204
Query: 422 KSS 424
K S
Sbjct: 205 KLS 207
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 170 SYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 229
S IL+ G GKTS +Q + N F YK T+GVDF K+L + G+ V LQ+WDI
Sbjct: 28 SLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVL---EIMGQKVLLQLWDI 84
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 103 SDAETV-LKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
+D E + LKILV+G GKTS +Q + N F YK T+GVDF K+L
Sbjct: 22 NDDEAISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVL 70
>UNIPROTKB|E2RRA2 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
EMBL:AAEX03010214 RefSeq:XP_539883.1 ProteinModelPortal:E2RRA2
Ensembl:ENSCAFT00000006357 GeneID:482767 KEGG:cfa:482767
NextBio:20857291 Uniprot:E2RRA2
Length = 217
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 75/217 (34%), Positives = 116/217 (53%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L + G+ VK+Q+WD A
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSL---EIDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FESV W H+++ A L +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKY----GAANLVIMLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCDL + R V + + +Y ++ +E S+KE S N VD + M E +
Sbjct: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKE------SKN--VDEVFTL--MARELI 180
Query: 420 ERKSSIRLSEETLR----DDQPKKLVPADKVSTYCWC 452
R S L E TL D +P L K T+C C
Sbjct: 181 ARNSLHLLGERTLDSPAPDSRPVVLAQDPKEKTHCMC 217
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L + G+ VK+Q+WD
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSL---EIDGKKVKMQVWD 72
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 62/170 (36%), Positives = 106/170 (62%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD VGKT VQ F F++ NT+GVDF+ K L + G+ VKLQIWD A
Sbjct: 14 FKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTL---EIHGKRVKLQIWDTA 70
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G II +D+T + +F SV +W D+ G+ + LL+ +
Sbjct: 71 GQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKY----GGSNIVPLLIGN 126
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
KCDL + R+V + + + + HQ +F+S IE S+K+ ++++ N + +I
Sbjct: 127 KCDLSESREVPLEDAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASELI 176
Score = 122 (48.0 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GD VGKT VQ F F++ NT+GVDF+ K L + G+ VKLQIWD
Sbjct: 14 FKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTL---EIHGKRVKLQIWD 68
>ZFIN|ZDB-GENE-061215-104 [details] [associations]
symbol:rab39b "RAB39B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-061215-104 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J CTD:116442
EMBL:AL954129 EMBL:BC128658 IPI:IPI00503702 RefSeq:NP_001073492.1
UniGene:Dr.108453 Ensembl:ENSDART00000101406 GeneID:566010
KEGG:dre:566010 InParanoid:A1A5H9 OMA:NDESECL NextBio:20887972
Uniprot:A1A5H9
Length = 213
Score = 291 (107.5 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 61/167 (36%), Positives = 104/167 (62%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W + S + + +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSH-VQPHSIV 117
Query: 353 LPCLLLASKCDL-PDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIE 398
LL+ KCDL P RQV E E + Y M ++E S+++ + +E
Sbjct: 118 F--LLVGHKCDLEPQRQVSQQEAEKLAAAYG-MRYVETSARDAINVE 161
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 289 (106.8 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 67/199 (33%), Positives = 114/199 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 135
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 136 KCDMEDERVIFTERGKHLAEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 191
Query: 420 ERKSSIRLSEETLR-DDQP 437
E SI ++ R D P
Sbjct: 192 ETDPSITAGKQNTRLKDTP 210
Score = 112 (44.5 bits), Expect = 0.00051, P = 0.00051
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 77
>UNIPROTKB|Q1RMR4 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:Q15907 GeneTree:ENSGT00700000104031
EMBL:BC114760 IPI:IPI00701622 RefSeq:NP_001040003.1
UniGene:Bt.12645 ProteinModelPortal:Q1RMR4 PRIDE:Q1RMR4
Ensembl:ENSBTAT00000035769 GeneID:614507 KEGG:bta:614507 CTD:376267
InParanoid:Q1RMR4 KO:K07908 OMA:HNITETF OrthoDB:EOG4HDSVG
NextBio:20899139 Uniprot:Q1RMR4
Length = 212
Score = 289 (106.8 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 64/213 (30%), Positives = 120/213 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD A
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY +++ YY+ + G +++D+++ +S++ +++W D+D G +L+ +
Sbjct: 66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEGVQK--ILIGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D RQV + + + +Y M + E S+ +L I++S L + ++ + R E E +
Sbjct: 122 KADEEQKRQVGREQGQQLAREYG-MDFYETSACTNLNIKESFTRLTELVLQAHRKELEGL 180
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+++ L+ L +D+ K PA+ T CWC
Sbjct: 181 RTRANHELALAELEEDEGKPEGPANSSKT-CWC 212
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWD 63
>UNIPROTKB|P59190 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL139022 HOGENOM:HOG000233968 CTD:376267 KO:K07908 OMA:HNITETF
EMBL:BC040679 EMBL:BX248046 IPI:IPI00383449 IPI:IPI00394882
RefSeq:NP_941959.1 UniGene:Hs.512492 ProteinModelPortal:P59190
SMR:P59190 IntAct:P59190 STRING:P59190 PhosphoSite:P59190
DMDM:27734452 PaxDb:P59190 PRIDE:P59190 DNASU:376267
Ensembl:ENST00000267512 Ensembl:ENST00000533601 GeneID:376267
KEGG:hsa:376267 UCSC:uc001xhz.2 UCSC:uc021rut.1
GeneCards:GC14M065412 HGNC:HGNC:20150 HPA:HPA041177
neXtProt:NX_P59190 PharmGKB:PA134901572 GenomeRNAi:376267
NextBio:100634 ArrayExpress:P59190 Bgee:P59190 CleanEx:HS_RAB15
Genevestigator:P59190 Uniprot:P59190
Length = 212
Score = 287 (106.1 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 64/213 (30%), Positives = 120/213 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD A
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY +++ YY+ + G +++D+++ +S++ +++W D+D G +L+ +
Sbjct: 66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEGVQK--ILIGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D RQV + + + +Y M + E S+ +L I++S L + ++ + R E E +
Sbjct: 122 KADEEQKRQVGREQGQQLAKEYG-MDFYETSACTNLNIKESFTRLTELVLQAHRKELEGL 180
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
++S L+ L +++ K PA+ T CWC
Sbjct: 181 RMRASNELALAELEEEEGKPEGPANSSKT-CWC 212
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWD 63
>MGI|MGI:1916865 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1916865
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4HDSVG EMBL:BC027769
IPI:IPI00170032 UniGene:Mm.172847 ProteinModelPortal:Q8K386
SMR:Q8K386 IntAct:Q8K386 STRING:Q8K386 PhosphoSite:Q8K386
PaxDb:Q8K386 PRIDE:Q8K386 InParanoid:Q8K386 CleanEx:MM_RAB15
Genevestigator:Q8K386 GermOnline:ENSMUSG00000021062 Uniprot:Q8K386
Length = 212
Score = 287 (106.1 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 64/213 (30%), Positives = 119/213 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + G V++QIWD A
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTID---VDGIKVRIQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY +++ YY+ + G +++D+++ +S++ +++W D+D G +L+ +
Sbjct: 66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEGVQK--ILIGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D RQV + + + +Y M + E S+ +L I++S L + ++ + R E + +
Sbjct: 122 KADEEQKRQVGREQGQQLAKEYG-MDFYETSACTNLNIKESFTRLTELVLQAHRKELDGL 180
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
++S L+ L +D+ K PA+ T CWC
Sbjct: 181 RTRASNELALAELEEDEGKPEGPANSSKT-CWC 212
>UNIPROTKB|Q3ZC27 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC102961
IPI:IPI00714195 RefSeq:NP_001030212.1 UniGene:Bt.49611
ProteinModelPortal:Q3ZC27 PRIDE:Q3ZC27 Ensembl:ENSBTAT00000016258
GeneID:506911 KEGG:bta:506911 CTD:401409 InParanoid:Q3ZC27
OMA:RNSLHLY OrthoDB:EOG4WQ13N NextBio:20867797 Uniprot:Q3ZC27
Length = 217
Score = 286 (105.7 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 66/213 (30%), Positives = 113/213 (53%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT VQ F +++ +NT+GVDF+ + L + G+ VK+Q+WD A
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRAL---EIDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FESV W H+++ A L +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKY----GAANLVIMLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCDL + R V + + +Y ++ +E S+KE I++ + ++ +
Sbjct: 131 KCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMARHSLPLYGE 190
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
S+ L E T P + PA + C C
Sbjct: 191 GAPGSLPL-EST-----PVLMAPAPREKNQCTC 217
Score = 127 (49.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT VQ F +++ +NT+GVDF+ + L + G+ VK+Q+WD
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRAL---EIDGKKVKMQVWD 72
>UNIPROTKB|F1P278 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:RNSLHLY
EMBL:AADN02006362 IPI:IPI00604193 Ensembl:ENSGALT00000020960
Uniprot:F1P278
Length = 212
Score = 286 (105.7 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 65/213 (30%), Positives = 113/213 (53%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT V F +F + +NT+GVDF+ + + G+ VK+Q+WD A
Sbjct: 14 FKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMD---IDGKKVKIQVWDTA 70
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ G I+ +DLT R +FES+ W H+++ A L +L+ +
Sbjct: 71 GQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKY----GAANLVMMLIGN 126
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D D RQV + + +Y ++ +E S+KE IE+ + +I ++
Sbjct: 127 KSDSVDKRQVLFEDACTLAEKYGLLAVLETSAKEAQNIEEVFVLMAKELIARNTLQLHGE 186
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+S+ L D +P P+ + T C C
Sbjct: 187 SPPNSVYL------DSRPVITSPSAE-KTQCLC 212
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT V F +F + +NT+GVDF+ + + G+ VK+Q+WD
Sbjct: 14 FKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMD---IDGKKVKIQVWD 68
>ZFIN|ZDB-GENE-040718-428 [details] [associations]
symbol:rab3db "RAB3D, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-428
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 EMBL:CU571395
EMBL:BC075784 IPI:IPI00496059 RefSeq:NP_001002679.1
UniGene:Dr.86400 SMR:Q6DI07 Ensembl:ENSDART00000064031
GeneID:436952 KEGG:dre:436952 CTD:436952 InParanoid:Q6DI07
OMA:GHSACAC NextBio:20831379 Uniprot:Q6DI07
Length = 220
Score = 286 (105.7 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 61/176 (34%), Positives = 102/176 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 25 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNN---KRIKLQIWDTA 81
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++MFD+TNR SF +V W + + DN ++ L+ +
Sbjct: 82 GQERYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYS-WDNAQVI---LVGN 137
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCDL D R + + + + H+ F + E S+K+ + ++ LVD +IC K E
Sbjct: 138 KCDLEDERLIPTEDSQRLAHELGFQ-FFEASAKDSINVKQVFECLVD-VICDKMTE 191
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 25 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNN---KRIKLQIWD 79
>UNIPROTKB|A4D1S5 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 EMBL:CH236950
eggNOG:COG1100 HOVERGEN:HBG009351 EMBL:AC069335
HOGENOM:HOG000233968 CTD:401409 OMA:RNSLHLY EMBL:AC093087
EMBL:BC140796 EMBL:AF091033 IPI:IPI00478209 IPI:IPI00923598
RefSeq:NP_001008749.2 UniGene:Hs.583545 ProteinModelPortal:A4D1S5
SMR:A4D1S5 STRING:A4D1S5 PhosphoSite:A4D1S5 PRIDE:A4D1S5
Ensembl:ENST00000275874 Ensembl:ENST00000356407
Ensembl:ENST00000537763 GeneID:401409 KEGG:hsa:401409
UCSC:uc010lni.2 GeneCards:GC07P140103 HGNC:HGNC:19982 HPA:HPA051077
neXtProt:NX_A4D1S5 PharmGKB:PA162400617 GenomeRNAi:401409
NextBio:106817 ArrayExpress:A4D1S5 Bgee:A4D1S5 CleanEx:HS_RAB19
Genevestigator:A4D1S5 Uniprot:A4D1S5
Length = 217
Score = 284 (105.0 bits), Expect = 8.9e-25, P = 8.9e-25
Identities = 63/213 (29%), Positives = 109/213 (51%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L G+ VK+Q+WD A
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD---IDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FES+ W H+++ A + +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKY----GAANVVIMLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCDL + R V + + +Y ++ +E S+KE IE+ + +I +
Sbjct: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGE 190
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+ + L D P + T+C C
Sbjct: 191 SALNGLPL------DSSPVLMAQGPSEKTHCTC 217
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L G+ VK+Q+WD
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD---IDGKKVKMQVWD 72
>ZFIN|ZDB-GENE-041210-268 [details] [associations]
symbol:rab3ab "RAB3A, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041210-268
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:BX936438 IPI:IPI00515876
ProteinModelPortal:F1QVZ4 Ensembl:ENSDART00000124350 Bgee:F1QVZ4
Uniprot:F1QVZ4
Length = 287
Score = 283 (104.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/175 (34%), Positives = 102/175 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 90 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 146
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 147 GQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWSTQIKTYS-WDNAQVL---LVGN 202
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E ++ + E S+K+++ ++ + LVD IIC K E
Sbjct: 203 KCDMEDERVVASERGRQLSEHLGFEYFEASAKDNINVKQTFERLVD-IICEKMSE 256
Score = 113 (44.8 bits), Expect = 0.00088, P = 0.00088
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 90 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 144
>RGD|735172 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:735172 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 GO:GO:0007269 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:M83679 EMBL:BC094954 IPI:IPI00196795
PIR:F42148 RefSeq:NP_942044.1 UniGene:Rn.24234
ProteinModelPortal:P35289 STRING:P35289 PhosphoSite:P35289
PRIDE:P35289 Ensembl:ENSRNOT00000010043 GeneID:299156
KEGG:rno:299156 UCSC:RGD:735172 InParanoid:P35289 NextBio:644892
Genevestigator:P35289 GermOnline:ENSRNOG00000007364 Uniprot:P35289
Length = 212
Score = 283 (104.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 64/213 (30%), Positives = 119/213 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD A
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY +++ YY+ + G +++D+++ +S++ +++W D+D G +L+ +
Sbjct: 66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEGVQK--ILIGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D RQV + + + +Y M + E S+ +L I++S L + ++ + R E + +
Sbjct: 122 KADEEQKRQVGREQGQQLAKEYG-MDFYETSACTNLNIKESFTRLTELVLQAHRKELDGL 180
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+S L+ L +D+ K PA+ T CWC
Sbjct: 181 RTCASNELALAELEEDEGKTEGPANSSKT-CWC 212
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K + + G V++QIWD
Sbjct: 9 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTI---EVDGIKVRIQIWD 63
>DICTYBASE|DDB_G0285051 [details] [associations]
symbol:rab32D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0285051 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000073 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HSSP:P20339 RefSeq:XP_639910.1 ProteinModelPortal:Q54P07
PRIDE:Q54P07 EnsemblProtists:DDB0229426 GeneID:8624822
KEGG:ddi:DDB_G0285051 OMA:NDIITHI Uniprot:Q54P07
Length = 228
Score = 283 (104.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 68/217 (31%), Positives = 114/217 (52%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
+++ GD VGKTS + + +KF + YK+T+G DF +K +Q+WD AGQ
Sbjct: 12 LILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDI---ITHIQLWDTAGQ 68
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGA--MLPCLLLAS 360
++Y C++ +++ SD I++FD++N SF ++ W SK I +G LP LLLA+
Sbjct: 69 EKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLAN 128
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII------CSKRM 414
K D R V+ +EI C + + EVS+K + I++S+ LV+ II +++
Sbjct: 129 KSDSLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDKDSDNEQF 188
Query: 415 EEEAVERKSSIRLSEETLRDDQPKKLVPADKVSTYCW 451
+ E SSI L + + D P+ + C+
Sbjct: 189 NDSPDEETSSITLLGTSKKHDNTNPNKPSTSSPSSCF 225
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/197 (30%), Positives = 116/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---ELNGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+ +V E N+ + Q +S E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPNSKVVETNDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLRAKKESVAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ I+L + + R
Sbjct: 180 QQQQQNDVIKLKQNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---ELNGEKVKLQIWD 63
>UNIPROTKB|Q17QU4 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0050808 "synapse organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0050808 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J EMBL:BC118177
IPI:IPI00691206 RefSeq:NP_001069563.1 UniGene:Bt.55967
ProteinModelPortal:Q17QU4 PRIDE:Q17QU4 Ensembl:ENSBTAT00000026354
GeneID:537560 KEGG:bta:537560 CTD:116442 InParanoid:Q17QU4
KO:K07925 OMA:TKSDRRC NextBio:20877158 Uniprot:Q17QU4
Length = 213
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/173 (35%), Positives = 105/173 (60%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W L+ +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW---LEETKVHVQPYQ 115
Query: 353 LPCLLLASKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ +L+ KCDL RQV +E E + Y M +IE S+++ + +E + L
Sbjct: 116 IVFVLVGHKCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDL 167
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>UNIPROTKB|Q96DA2 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0050808
"synapse organization" evidence=ISS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
Orphanet:777 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL356738 HOGENOM:HOG000233968 OrthoDB:EOG43JC5J CTD:116442
KO:K07925 OMA:TKSDRRC EMBL:AY052478 EMBL:AL834460 EMBL:BC009714
IPI:IPI00060801 RefSeq:NP_741995.1 UniGene:Hs.632832
ProteinModelPortal:Q96DA2 SMR:Q96DA2 STRING:Q96DA2
PhosphoSite:Q96DA2 DMDM:27734447 PaxDb:Q96DA2 PeptideAtlas:Q96DA2
PRIDE:Q96DA2 DNASU:116442 Ensembl:ENST00000369454 GeneID:116442
KEGG:hsa:116442 UCSC:uc004fne.3 GeneCards:GC0XM154487
HGNC:HGNC:16499 HPA:HPA001114 MIM:300271 MIM:300774
neXtProt:NX_Q96DA2 PharmGKB:PA34131 InParanoid:Q96DA2
PhylomeDB:Q96DA2 GenomeRNAi:116442 NextBio:79915 Bgee:Q96DA2
CleanEx:HS_RAB39B Genevestigator:Q96DA2 GermOnline:ENSG00000155961
Uniprot:Q96DA2
Length = 213
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/173 (35%), Positives = 105/173 (60%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W L+ +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW---LEETKVHVQPYQ 115
Query: 353 LPCLLLASKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ +L+ KCDL RQV +E E + Y M +IE S+++ + +E + L
Sbjct: 116 IVFVLVGHKCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDL 167
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>UNIPROTKB|F2Z552 [details] [associations]
symbol:LOC100516775 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0016192
GO:GO:0015031 GO:GO:0050808 GeneTree:ENSGT00690000101664 KO:K07925
OMA:TKSDRRC EMBL:CU861979 RefSeq:XP_003135565.1
ProteinModelPortal:F2Z552 PRIDE:F2Z552 Ensembl:ENSSSCT00000022617
GeneID:100516775 KEGG:ssc:100516775 Uniprot:F2Z552
Length = 213
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/173 (35%), Positives = 105/173 (60%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W L+ +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW---LEETKVHVQPYQ 115
Query: 353 LPCLLLASKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ +L+ KCDL RQV +E E + Y M +IE S+++ + +E + L
Sbjct: 116 IVFVLVGHKCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDL 167
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>MGI|MGI:1915040 [details] [associations]
symbol:Rab39b "RAB39B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0050808 "synapse organization" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1915040
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
CTD:116442 KO:K07925 EMBL:AK039013 EMBL:AK048981 EMBL:AK160737
EMBL:BC050853 EMBL:BC052472 IPI:IPI00272230 RefSeq:NP_780331.1
UniGene:Mm.45148 ProteinModelPortal:Q8BHC1 SMR:Q8BHC1
PhosphoSite:Q8BHC1 PaxDb:Q8BHC1 PRIDE:Q8BHC1
Ensembl:ENSMUST00000033545 GeneID:67790 KEGG:mmu:67790
InParanoid:Q8BHC1 NextBio:325571 Bgee:Q8BHC1 CleanEx:MM_RAB39B
Genevestigator:Q8BHC1 GermOnline:ENSMUSG00000031202 Uniprot:Q8BHC1
Length = 213
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/173 (35%), Positives = 105/173 (60%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W L+ +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW---LEETKVHVQPYQ 115
Query: 353 LPCLLLASKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ +L+ KCDL RQV +E E + Y M +IE S+++ + +E + L
Sbjct: 116 IVFVLVGHKCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDL 167
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>ZFIN|ZDB-GENE-070620-7 [details] [associations]
symbol:zgc:165464 "zgc:165464" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070620-7 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
KO:K07925 OMA:TKSDRRC EMBL:CT025910 EMBL:BC142804 IPI:IPI00485605
RefSeq:NP_001092211.1 UniGene:Dr.111079 Ensembl:ENSDART00000019199
GeneID:562596 KEGG:dre:562596 NextBio:20884483 Uniprot:A5PLA1
Length = 213
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 60/173 (34%), Positives = 105/173 (60%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 292
+ I + + +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRI 58
Query: 293 KLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAM 352
KLQIWD AGQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W + S + + +
Sbjct: 59 KLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSH-VQPHSIV 117
Query: 353 LPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+L+ KCDL RQV E E + Y M ++E S+++ + +E + L
Sbjct: 118 F--ILVGHKCDLEQQRQVSQQEAEKLAAAYG-MRYVETSARDAINVEKAFTEL 167
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWD 64
>UNIPROTKB|E1BF18 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 EMBL:DAAA02050293
EMBL:DAAA02050288 EMBL:DAAA02050289 EMBL:DAAA02050290
EMBL:DAAA02050291 EMBL:DAAA02050292 IPI:IPI00906126
Ensembl:ENSBTAT00000054286 ArrayExpress:E1BF18 Uniprot:E1BF18
Length = 218
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/194 (33%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W L+ DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS--LNQTYSWDNAQVI---LVGN 134
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 135 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 190
Query: 420 ERKSSIRLSEETLR 433
E +I +++ R
Sbjct: 191 ETDPAITAAKQNTR 204
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 77
>UNIPROTKB|E2QSW2 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03001448
ProteinModelPortal:E2QSW2 Ensembl:ENSCAFT00000006096 Uniprot:E2QSW2
Length = 225
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 66/204 (32%), Positives = 116/204 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 29 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 85
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 86 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 141
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 142 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 197
Query: 420 ERKSSIRLSEETLR-DDQPKKLVP 442
E +I +++ R + P P
Sbjct: 198 ETDPAITAAKQNTRLKESPPPAQP 221
Score = 112 (44.5 bits), Expect = 0.00062, P = 0.00062
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 29 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 83
>UNIPROTKB|E2RC93 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
OMA:QMASSQD EMBL:AAEX03001448 EMBL:AAEX03001449 EMBL:AAEX03001450
ProteinModelPortal:E2RC93 Ensembl:ENSCAFT00000011237 Uniprot:E2RC93
Length = 227
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 66/204 (32%), Positives = 116/204 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 88 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 143
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 144 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 199
Query: 420 ERKSSIRLSEETLR-DDQPKKLVP 442
E +I +++ R + P P
Sbjct: 200 ETDPAITAAKQNTRLKESPPPAQP 223
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 85
>MGI|MGI:1914545 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914545 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AJ310532 EMBL:AF312037 EMBL:AY026947
EMBL:AK014132 IPI:IPI00316495 RefSeq:NP_076341.1 UniGene:Mm.151600
ProteinModelPortal:P62823 SMR:P62823 IntAct:P62823 STRING:P62823
PhosphoSite:P62823 PaxDb:P62823 PRIDE:P62823
Ensembl:ENSMUST00000167824 GeneID:67295 KEGG:mmu:67295
InParanoid:P62823 ChiTaRS:RAB3C NextBio:324148 Bgee:P62823
CleanEx:MM_RAB3C Genevestigator:P62823
GermOnline:ENSMUSG00000021700 Uniprot:P62823
Length = 227
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L +
Sbjct: 88 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LAGN 143
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 144 KCDMEDERVVSTERGQRLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 199
Query: 420 ERKSSIRLSEETLR 433
E +I ++++ R
Sbjct: 200 ETDPAITAAKQSTR 213
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 85
>RGD|620923 [details] [associations]
symbol:Rab3c "RAB3C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0017156
"calcium ion-dependent exocytosis" evidence=TAS] [GO:0017157
"regulation of exocytosis" evidence=IEA;ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620923 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017156 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
CTD:115827 KO:K07883 OMA:QMASSQD EMBL:D78197 EMBL:U54807
EMBL:U37099 IPI:IPI00209150 PIR:JC5066 RefSeq:NP_598220.1
UniGene:Rn.11037 ProteinModelPortal:P62824 SMR:P62824 STRING:P62824
PhosphoSite:P62824 PRIDE:P62824 Ensembl:ENSRNOT00000015871
GeneID:171058 KEGG:rno:171058 InParanoid:P62824 NextBio:621629
Genevestigator:P62824 GermOnline:ENSRNOG00000011623 Uniprot:P62824
Length = 227
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L +
Sbjct: 88 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LAGN 143
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 144 KCDMEDERVVSTERGQRLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 199
Query: 420 ERKSSIRLSEETLR 433
E +I ++++ R
Sbjct: 200 ETDPAITAAKQSTR 213
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 85
>UNIPROTKB|P20337 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
EMBL:AL445685 GO:GO:0018125 EMBL:AL589663 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 OMA:WFDFFEA EMBL:M28214
EMBL:AF498932 EMBL:BC005035 IPI:IPI00300562 PIR:D34323
RefSeq:NP_002858.2 UniGene:Hs.123072 PDB:3DZ8 PDBsum:3DZ8
ProteinModelPortal:P20337 SMR:P20337 STRING:P20337
PhosphoSite:P20337 DMDM:38258903 PaxDb:P20337 PeptideAtlas:P20337
PRIDE:P20337 DNASU:5865 Ensembl:ENST00000371655
Ensembl:ENST00000537650 GeneID:5865 KEGG:hsa:5865 UCSC:uc001cth.3
GeneCards:GC01M052373 HGNC:HGNC:9778 HPA:CAB023293 HPA:HPA003159
MIM:179510 neXtProt:NX_P20337 PharmGKB:PA34133 InParanoid:P20337
PhylomeDB:P20337 EvolutionaryTrace:P20337 GenomeRNAi:5865
NextBio:22778 Bgee:P20337 CleanEx:HS_RAB3B Genevestigator:P20337
GermOnline:ENSG00000169213 Uniprot:P20337
Length = 219
Score = 281 (104.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 69/202 (34%), Positives = 112/202 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ + +V E + + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDSL 191
Query: 419 VERKSSIRLSEETLRDDQPKKL 440
S + S+ T D P L
Sbjct: 192 DTDPSMLGSSKNTRLSDTPPLL 213
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 77
>UNIPROTKB|P10949 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
OrthoDB:EOG4TB4C6 EMBL:M19887 EMBL:BC112795 IPI:IPI00713835
PIR:C29224 RefSeq:NP_001040071.1 RefSeq:NP_789862.1
UniGene:Bt.91125 ProteinModelPortal:P10949 SMR:P10949 PRIDE:P10949
Ensembl:ENSBTAT00000009611 GeneID:338100 GeneID:617600
KEGG:bta:338100 KEGG:bta:617600 CTD:115827 InParanoid:P10949
KO:K07883 OMA:QMASSQD NextBio:20812538 ArrayExpress:P10949
Uniprot:P10949
Length = 227
Score = 281 (104.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 88 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 143
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 144 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 199
Query: 420 ERKSSIRLSEETLR 433
E +I +++ R
Sbjct: 200 ETDPAITAAKQNTR 213
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 85
>UNIPROTKB|Q96E17 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 HPA:HPA003160 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AY026936 EMBL:BC013033 IPI:IPI00061114
RefSeq:NP_612462.1 UniGene:Hs.482173 ProteinModelPortal:Q96E17
SMR:Q96E17 IntAct:Q96E17 STRING:Q96E17 PhosphoSite:Q96E17
DMDM:23396832 PaxDb:Q96E17 PRIDE:Q96E17 Ensembl:ENST00000282878
GeneID:115827 KEGG:hsa:115827 UCSC:uc003jrp.3 GeneCards:GC05P057914
HGNC:HGNC:30269 MIM:612829 neXtProt:NX_Q96E17 PharmGKB:PA134874100
InParanoid:Q96E17 PhylomeDB:Q96E17 GenomeRNAi:115827 NextBio:79698
Bgee:Q96E17 CleanEx:HS_RAB3C Genevestigator:Q96E17
GermOnline:ENSG00000152932 Uniprot:Q96E17
Length = 227
Score = 281 (104.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 87
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 88 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 143
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 144 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 199
Query: 420 ERKSSIRLSEETLR 433
E +I +++ R
Sbjct: 200 ETDPAITAAKQNTR 213
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 85
>UNIPROTKB|F1SLJ0 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017157 "regulation of exocytosis" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942 KO:K07883
OMA:QMASSQD EMBL:CU914321 EMBL:CU914659 EMBL:FP565241
RefSeq:XP_003359827.2 Ensembl:ENSSSCT00000018435 GeneID:100523703
KEGG:ssc:100523703 Uniprot:F1SLJ0
Length = 225
Score = 281 (104.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/194 (32%), Positives = 113/194 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD A
Sbjct: 29 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWDTA 85
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 86 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVI---LVGN 141
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D +V E + + Q F + E S+K+++ ++ + LVD IIC K E++
Sbjct: 142 KCDMEDERVISTERGQHLGEQLGF-EFFETSAKDNINVKQTFERLVD-IICDKM--SESL 197
Query: 420 ERKSSIRLSEETLR 433
E +I +++ R
Sbjct: 198 ETDPAITAAKQNTR 211
Score = 112 (44.5 bits), Expect = 0.00062, P = 0.00062
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + +KLQIWD
Sbjct: 29 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNE---KRIKLQIWD 83
>UNIPROTKB|F1PWY4 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030141 "secretory granule" evidence=IEA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:AAEX03009711
EMBL:AAEX03009710 Ensembl:ENSCAFT00000039721 Uniprot:F1PWY4
Length = 243
Score = 280 (103.6 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 47 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 102
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN SF +V W + + DN ++ L+
Sbjct: 103 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWATQIKTYS-WDNAQVI---LVG 158
Query: 360 SKCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ + +V E + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 159 NKCDMEEERVVPTEKGRLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDSL 215
Query: 419 VERKSSIRLSEETLRDDQPKKL 440
S++ S+ T D P L
Sbjct: 216 DTDPSTLGTSKNTRLSDTPPLL 237
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 47 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 101
>UNIPROTKB|F1S6G3 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 KO:K06108 EMBL:CU468046
RefSeq:XP_003128025.1 Ensembl:ENSSSCT00000026725 GeneID:100514585
KEGG:ssc:100514585 Uniprot:F1S6G3
Length = 219
Score = 280 (103.6 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 67/201 (33%), Positives = 112/201 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + ++ + VKLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQE---KRVKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVGN 135
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ + +V E + + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 136 KCDMEEERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDTLD 192
Query: 420 ERKSSIRLSEETLRDDQPKKL 440
S + S+ T D P L
Sbjct: 193 TDPSVLGTSKNTRLSDTPPLL 213
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + ++ + VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQE---KRVKLQIWD 77
>ZFIN|ZDB-GENE-050208-660 [details] [associations]
symbol:rab3b "RAB3B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050208-660 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:CR381682 IPI:IPI00482747
Ensembl:ENSDART00000062820 Uniprot:F1QCC8
Length = 218
Score = 279 (103.3 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 67/201 (33%), Positives = 113/201 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F ++ +TVG+DF K + + VKLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRND---KRVKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +S+ +V W + + DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYS-WDNAQVI---LVGN 135
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ + R V + + + Q F + E S+KE++ + LVD IIC K E V
Sbjct: 136 KCDMDEERVVPFEKGKHLADQLGF-EYYEASAKENINVRQVFERLVD-IICVKMSERVDV 193
Query: 420 ERKSSIRLSEETLRDDQPKKL 440
E + ++ T D+P +L
Sbjct: 194 E-PPMVTGAKTTRLTDKPPQL 213
Score = 114 (45.2 bits), Expect = 0.00032, P = 0.00032
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F ++ +TVG+DF K + + VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRND---KRVKLQIWD 77
>ZFIN|ZDB-GENE-080722-14 [details] [associations]
symbol:rab3da "RAB3D, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-080722-14 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
EMBL:BX901942 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 IPI:IPI00631632
RefSeq:NP_001139069.1 UniGene:Dr.80431 Ensembl:ENSDART00000023757
Ensembl:ENSDART00000146372 GeneID:567288 CTD:567288
NextBio:20888605 Uniprot:B8A665
Length = 223
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 66/200 (33%), Positives = 117/200 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + VKLQIWD A
Sbjct: 26 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNE---KRVKLQIWDTA 82
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++M+D+TN+ SF +V W + + DN ++ L+ +
Sbjct: 83 GQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQIKTYS-WDNAQVI---LVGN 138
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCDL D R V + + + ++ F + E S+K+++ ++ LVD IIC K E++
Sbjct: 139 KCDLEDDRLVAREDGQRLANELGFQ-FFEASAKDNINVKQVFERLVD-IICDKM--NESL 194
Query: 420 ERKSSIRLSEE--TLRDDQP 437
+ SI +++ +L+D P
Sbjct: 195 DTDPSILTNQKGPSLQDTPP 214
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + + VKLQIWD
Sbjct: 26 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNE---KRVKLQIWD 80
>UNIPROTKB|P10948 [details] [associations]
symbol:RAB3B "Ras-related protein Rab-3B" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0018125 "peptidyl-cysteine
methylation" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6
EMBL:M19886 EMBL:BC122723 IPI:IPI00713862 PIR:B29224
RefSeq:NP_776872.1 UniGene:Bt.388 ProteinModelPortal:P10948
SMR:P10948 PRIDE:P10948 Ensembl:ENSBTAT00000007019 GeneID:282030
KEGG:bta:282030 CTD:5865 InParanoid:P10948 KO:K06108 OMA:WFDFFEA
NextBio:20805893 Uniprot:P10948
Length = 219
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ + +V E + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 135 NKCDMEEERVVPTEKGRLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDTL 191
Query: 419 VERKSSIRLSEETLRDDQPKKL 440
S + S+ T D P L
Sbjct: 192 DTDPSLLGTSKNTRLSDTPPLL 213
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 77
>UNIPROTKB|P11023 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9913 "Bos
taurus" [GO:0050975 "sensory perception of touch" evidence=ISS]
[GO:0016188 "synaptic vesicle maturation" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0051602 "response to electrical
stimulus" evidence=ISS] [GO:0048790 "maintenance of presynaptic
active zone structure" evidence=ISS] [GO:0031630 "regulation of
synaptic vesicle fusion to presynaptic membrane" evidence=ISS]
[GO:0030324 "lung development" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016079 "synaptic
vesicle exocytosis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0003016 "respiratory
system process" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001669 "acrosomal
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 EMBL:M19885 EMBL:BC118278
IPI:IPI00703436 PIR:A29224 RefSeq:NP_776871.2 UniGene:Bt.2362
ProteinModelPortal:P11023 SMR:P11023 STRING:P11023 PRIDE:P11023
Ensembl:ENSBTAT00000014062 GeneID:282029 KEGG:bta:282029 CTD:5864
GeneTree:ENSGT00690000101942 InParanoid:P11023 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 NextBio:20805892 GO:GO:0048790
Uniprot:P11023
Length = 220
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 189
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>UNIPROTKB|E2RIA5 [details] [associations]
symbol:RAB3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051602 "response to electrical stimulus"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=IEA] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0009791 GO:GO:0007409 GO:GO:0003016
GO:GO:0007005 GO:GO:0016079 GO:GO:0050975 GO:GO:0016188
GO:GO:0031630 GeneTree:ENSGT00690000101942 OMA:QLTEQPA
GO:GO:0048790 EMBL:AAEX03012283 ProteinModelPortal:E2RIA5
PRIDE:E2RIA5 Ensembl:ENSCAFT00000023719 NextBio:20858896
Uniprot:E2RIA5
Length = 226
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 29 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 85
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 86 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 141
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 142 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 195
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 29 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 83
>UNIPROTKB|P20336 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0016188 "synaptic vesicle maturation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0048790 "maintenance of presynaptic active zone structure"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0051602 "response to
electrical stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0014047 "glutamate secretion"
evidence=TAS] [GO:0060201 "clathrin-sculpted acetylcholine
transport vesicle membrane" evidence=TAS] [GO:0060203
"clathrin-sculpted glutamate transport vesicle membrane"
evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric
acid transport vesicle membrane" evidence=TAS] [GO:0070083
"clathrin-sculpted monoamine transport vesicle membrane"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IMP;TAS]
Reactome:REACT_13685 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791
GO:GO:0007409 GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671
GO:GO:0007005 EMBL:CH471106 GO:GO:0007269 GO:GO:0014047
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0061202 GO:GO:0016188 EMBL:AC068499 GO:GO:0031630
HOGENOM:HOG000233968 CTD:5864 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:M28210 EMBL:AF157809
EMBL:AF157806 EMBL:AF157807 EMBL:AF157808 EMBL:AF254795
EMBL:AF498931 EMBL:AK289559 EMBL:BC011782 IPI:IPI00023504
PIR:C34323 RefSeq:NP_002857.1 UniGene:Hs.27744
ProteinModelPortal:P20336 SMR:P20336 IntAct:P20336 STRING:P20336
PhosphoSite:P20336 DMDM:131801 PaxDb:P20336 PRIDE:P20336 DNASU:5864
Ensembl:ENST00000222256 GeneID:5864 KEGG:hsa:5864 UCSC:uc002nie.2
GeneCards:GC19M018307 HGNC:HGNC:9777 HPA:CAB009949 HPA:HPA003160
MIM:179490 neXtProt:NX_P20336 PharmGKB:PA34132 InParanoid:P20336
PhylomeDB:P20336 GenomeRNAi:5864 NextBio:22774 Bgee:P20336
CleanEx:HS_RAB3A Genevestigator:P20336 GermOnline:ENSG00000105649
GO:GO:0060201 GO:GO:0060203 GO:GO:0070083 Uniprot:P20336
Length = 220
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 189
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>UNIPROTKB|Q06AU3 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9823 "Sus
scrofa" [GO:0030324 "lung development" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0051602 "response to electrical stimulus"
evidence=ISS] [GO:0050975 "sensory perception of touch"
evidence=ISS] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=ISS] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016188 "synaptic
vesicle maturation" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0003016 "respiratory system process"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864
GeneTree:ENSGT00690000101942 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:DQ917632 RefSeq:NP_001116651.1
UniGene:Ssc.5969 ProteinModelPortal:Q06AU3 SMR:Q06AU3 PRIDE:Q06AU3
Ensembl:ENSSSCT00000015183 GeneID:100144498 KEGG:ssc:100144498
Uniprot:Q06AU3
Length = 220
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 189
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>MGI|MGI:97843 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IDA] [GO:0001671 "ATPase
activator activity" evidence=ISO] [GO:0003016 "respiratory system
process" evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IMP] [GO:0016188 "synaptic vesicle maturation"
evidence=IMP] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031630
"regulation of synaptic vesicle fusion to presynaptic membrane"
evidence=IMP] [GO:0032781 "positive regulation of ATPase activity"
evidence=ISO] [GO:0043229 "intracellular organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP] [GO:0051020
"GTPase binding" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051602 "response to electrical stimulus"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97843 EMBL:X72966 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0043234 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0001669 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:AK005362
EMBL:AK158727 EMBL:AK161975 EMBL:BC053519 IPI:IPI00122965
PIR:S34070 RefSeq:NP_001159871.1 RefSeq:NP_033027.1 UniGene:Mm.5083
ProteinModelPortal:P63011 SMR:P63011 DIP:DIP-31051N IntAct:P63011
MINT:MINT-85820 STRING:P63011 PhosphoSite:P63011 PaxDb:P63011
PRIDE:P63011 Ensembl:ENSMUST00000034301 Ensembl:ENSMUST00000110090
Ensembl:ENSMUST00000110092 Ensembl:ENSMUST00000110093 GeneID:19339
KEGG:mmu:19339 InParanoid:P63011 ChiTaRS:RAB3A NextBio:296339
Bgee:P63011 CleanEx:MM_RAB3A Genevestigator:P63011
GermOnline:ENSMUSG00000031840 Uniprot:P63011
Length = 220
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 189
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>MGI|MGI:1917158 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IDA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IDA] [GO:0030141
"secretory granule" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917158 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 EMBL:AF312036
EMBL:AF307514 EMBL:AK012165 EMBL:AK082959 EMBL:BC051918
EMBL:BC057173 IPI:IPI00113112 RefSeq:NP_076026.1 UniGene:Mm.41580
ProteinModelPortal:Q9CZT8 SMR:Q9CZT8 IntAct:Q9CZT8
MINT:MINT-1341069 STRING:Q9CZT8 PhosphoSite:Q9CZT8 PaxDb:Q9CZT8
PRIDE:Q9CZT8 Ensembl:ENSMUST00000003502 Ensembl:ENSMUST00000106650
GeneID:69908 KEGG:mmu:69908 NextBio:330587 Bgee:Q9CZT8
CleanEx:MM_RAB3B Genevestigator:Q9CZT8
GermOnline:ENSMUSG00000003411 Uniprot:Q9CZT8
Length = 219
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ + +V E + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 135 NKCDMEEERVVPTEKGRLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDSM 191
Query: 419 VERKSSIRLSEETLRDDQPKKL 440
S + S+ T D P L
Sbjct: 192 DTDPSVLGASKTTRLSDTPPLL 213
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 77
>RGD|3528 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001669 "acrosomal vesicle" evidence=IEA;ISO]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0003016
"respiratory system process" evidence=IEA;ISO] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IEA;ISO] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032482 "Rab protein signal
transduction" evidence=IC] [GO:0032781 "positive regulation of ATPase
activity" evidence=IDA] [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IEA;ISO]
[GO:0050975 "sensory perception of touch" evidence=IEA;ISO]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0051117 "ATPase
binding" evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3528
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0043234 GO:GO:0016020 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0051117 GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975
HOVERGEN:HBG009351 GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5864 GeneTree:ENSGT00690000101942 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:X06889 EMBL:BC087580
IPI:IPI00325762 PIR:S01765 RefSeq:NP_037150.2 UniGene:Rn.44409
PDB:1ZBD PDB:3RAB PDBsum:1ZBD PDBsum:3RAB ProteinModelPortal:P63012
SMR:P63012 IntAct:P63012 MINT:MINT-1506235 STRING:P63012
PhosphoSite:P63012 PRIDE:P63012 Ensembl:ENSRNOT00000026391
GeneID:25531 KEGG:rno:25531 UCSC:RGD:3528 InParanoid:P63012
EvolutionaryTrace:P63012 NextBio:607029 ArrayExpress:P63012
Genevestigator:P63012 GermOnline:ENSRNOG00000019433 Uniprot:P63012
Length = 220
Score = 278 (102.9 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ D +V +E + + E S+K+++ ++ + LVD +IC K E
Sbjct: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVD-VICEKMSE 189
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ILI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 277 (102.6 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 57/179 (31%), Positives = 102/179 (56%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V NKF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
DL +RQV +A C N + + E S+KE + +E + + I +++E+V++
Sbjct: 128 DLDNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAF-----QTIARNALKQESVDK 181
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V NKF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTK 48
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V NKF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>RGD|620922 [details] [associations]
symbol:Rab3b "RAB3B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO;TAS]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IEA;ISO]
[GO:0030141 "secretory granule" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:620922 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0018125
OrthoDB:EOG4TB4C6 CTD:5865 KO:K06108 EMBL:Y14019 EMBL:S68807
IPI:IPI00470247 PIR:I53485 RefSeq:NP_112353.1 UniGene:Rn.3788
UniGene:Rn.9822 ProteinModelPortal:Q63941 SMR:Q63941 STRING:Q63941
PRIDE:Q63941 GeneID:81755 KEGG:rno:81755 InParanoid:Q63941
NextBio:615522 ArrayExpress:Q63941 Genevestigator:Q63941
GermOnline:ENSRNOG00000008001 Uniprot:Q63941
Length = 219
Score = 277 (102.6 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ + +V E + Q F + E S+KE++ + + LVD I C K M +
Sbjct: 135 NKCDMEEERVIPTEKGRLLAEQLGF-DFFEASAKENISVRQAFERLVDAI-CDK-MSDSM 191
Query: 419 VERKSSIRLSEETLRDDQPKKL 440
S + S+ T D P L
Sbjct: 192 DTDPSVLGASKTTRLSDTPPLL 213
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 77
>UNIPROTKB|Q6P9W6 [details] [associations]
symbol:Rab3b "Ras-related protein Rab-3B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0030141 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OMA:WFDFFEA IPI:IPI00470247
UniGene:Rn.3788 HSSP:P10114 EMBL:BC060562 SMR:Q6P9W6 STRING:Q6P9W6
Ensembl:ENSRNOT00000010645 InParanoid:Q6P9W6 Genevestigator:Q6P9W6
Uniprot:Q6P9W6
Length = 228
Score = 277 (102.6 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 70/210 (33%), Positives = 113/210 (53%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQV---EINEIEA------VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIIC 410
+KCD+ + +V E + A H Y + + E S+KE++ + + LVD I C
Sbjct: 135 NKCDMEEERVIPTEKGRLLAEQLGMHTAHTYTWFDFFEASAKENISVRQAFERLVDAI-C 193
Query: 411 SKRMEEEAVERKSSIRLSEETLRDDQPKKL 440
K M + S + S+ T D P L
Sbjct: 194 DK-MSDSMDTDPSVLGASKTTRLSDTPPLL 222
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H+K VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR----VKLQIWD 77
>ZFIN|ZDB-GENE-040801-2 [details] [associations]
symbol:rab3aa "RAB3A, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 KO:K07882 EMBL:CR769774 EMBL:BC075980
IPI:IPI00484138 RefSeq:NP_001003419.1 UniGene:Dr.83119 SMR:Q6DHJ2
Ensembl:ENSDART00000078838 GeneID:445024 KEGG:dre:445024 CTD:445024
InParanoid:Q6DHJ2 OMA:DIICERM OrthoDB:EOG42NJ17 NextBio:20831785
Uniprot:Q6DHJ2
Length = 220
Score = 277 (102.6 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 65/202 (32%), Positives = 112/202 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD A
Sbjct: 23 FKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN SF +V W + + DN +L L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKTYS-WDNAQVL---LVGN 135
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME--EE 417
KCD+ D +V + + Q F + E S+K+++ ++ + LVD +IC + E E
Sbjct: 136 KCDMEDERVVAGQRGRQLSEQLGF-EFFEASAKDNINVKQTFERLVD-VICERMSENLES 193
Query: 418 AVERKSSIRLSEETLRDDQPKK 439
A + +L E +QP++
Sbjct: 194 ADPSMTGNKLGPEL--SEQPQR 213
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + +KLQIWD
Sbjct: 23 FKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRND---KRIKLQIWD 77
>FB|FBgn0015789 [details] [associations]
symbol:Rab10 "Rab10" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:AE014298 GO:GO:0003924 GO:GO:0046331
eggNOG:COG1100 KO:K07976 HSSP:P07560 CTD:10890 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AY060425 EMBL:AB006189
RefSeq:NP_523419.1 UniGene:Dm.2609 SMR:O15971 STRING:O15971
EnsemblMetazoa:FBtr0077337 GeneID:33025 KEGG:dme:Dmel_CG17060
UCSC:CG17060-RA FlyBase:FBgn0015789 InParanoid:O15971
OrthoDB:EOG4XWDDW GenomeRNAi:33025 NextBio:781571 Uniprot:O15971
Length = 204
Score = 277 (102.6 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 60/186 (32%), Positives = 109/186 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELR---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++V+W ++D D M+ L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMI----LGN 122
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D++V E EA+ ++ + ++E S+K ++ IE + L + I+ K E+
Sbjct: 123 KCDMTDKRVVNKERGEAIAREHG-IRFMETSAKSNINIERAFCELAEAIL-DKTSGRESA 180
Query: 420 ERKSSI 425
E + +
Sbjct: 181 ENQERV 186
Score = 110 (43.8 bits), Expect = 0.00075, P = 0.00075
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELR---GKKIKLQIWD 64
>FB|FBgn0051118 [details] [associations]
symbol:RabX4 "RabX4" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 HSSP:P32939
RefSeq:NP_733043.1 ProteinModelPortal:Q9VC31 SMR:Q9VC31
EnsemblMetazoa:FBtr0084736 GeneID:42960 KEGG:dme:Dmel_CG31118
UCSC:CG31118-RA CTD:42960 FlyBase:FBgn0051118 InParanoid:Q9VC31
OMA:CKSNINI OrthoDB:EOG4S7H66 PhylomeDB:Q9VC31 GenomeRNAi:42960
NextBio:831533 ArrayExpress:Q9VC31 Bgee:Q9VC31 Uniprot:Q9VC31
Length = 213
Score = 276 (102.2 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 58/173 (33%), Positives = 98/173 (56%)
Query: 238 IPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIW 297
+ TY +L+ GDS VGKT V + K+ D Y +T+G+DF KL++ G P+KLQIW
Sbjct: 6 VATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLIN---LDGVPIKLQIW 62
Query: 298 DIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLL 357
D AGQ+R+ ++ YY+ + G ++M+D+TN +S+ ++ W ++ D + +L
Sbjct: 63 DTAGQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPD----VVKVL 118
Query: 358 LASKCDLP--DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI 408
+KC+ R V+ E + ++ M + EVS K ++ IED+ L +I
Sbjct: 119 AGNKCECSATQRMVDKERGEKIAENFD-MPFFEVSCKSNINIEDAFLSLARKI 170
Score = 144 (55.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 170 SYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+Y +L+ GDS VGKT V + K+ D Y +T+G+DF KL++ G P+KLQIWD
Sbjct: 8 TYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLIN---LDGVPIKLQIWD 63
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 104 DAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLS 151
D K+LV+GDS VGKT V + K+ D Y +T+G+DF KL++
Sbjct: 4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLIN 51
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 275 (101.9 bits), Expect = 9.9e-24, P = 9.9e-24
Identities = 60/195 (30%), Positives = 110/195 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +NY T+GVDF + + G+ VKLQIWD A
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMD---INGQRVKLQIWDTA 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN +SF +V +W ++++ C D+ + +L+ +
Sbjct: 68 GQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC--DS---VQKVLVGN 122
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
KC+ +R+V + Q +S+ E S+KE +E + ++ +K ++
Sbjct: 123 KCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLANPQSAS 182
Query: 421 RKSSIRLSEETLRDD 435
+ S R +L+D+
Sbjct: 183 KDQS-RTGGVSLKDN 196
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +NY T+GVDF + + G+ VKLQIWD
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMD---INGQRVKLQIWD 65
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 104 DAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
D + + K+L+IGDS VGK+S + F N F +NY T+GVDF + +
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTM 52
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 60/197 (30%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMEIQLF-ETSAKENINVEEMFNCITELVLRAKKENLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>UNIPROTKB|E1C8J9 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 OMA:PPSQQNC
EMBL:AADN02012575 IPI:IPI00598636 RefSeq:XP_422470.2
UniGene:Gga.9853 Ensembl:ENSGALT00000017197 GeneID:424636
KEGG:gga:424636 NextBio:20826946 Uniprot:E1C8J9
Length = 219
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 67/199 (33%), Positives = 110/199 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + VKLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRND---KRVKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+T+ SF +V W + + DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIKTYS-WDNAQVI---LVGN 135
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ D R + + + + + Q F + E S+KE++ + LVD IIC K E++
Sbjct: 136 KCDMEDERIIPLEKGKHLADQLGF-DYFEASAKENINVRQVFERLVD-IICEKM--SESI 191
Query: 420 ERKSSIRLSEETLR-DDQP 437
E S S +R D P
Sbjct: 192 ESDPSRGTSGRNVRLTDNP 210
Score = 111 (44.1 bits), Expect = 0.00074, P = 0.00074
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + + VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRND---KRVKLQIWD 77
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 60/197 (30%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 60/197 (30%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 60/197 (30%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 60/197 (30%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>UNIPROTKB|I3LHP6 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030141 "secretory granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:CU468046
Ensembl:ENSSSCT00000028423 Uniprot:I3LHP6
Length = 228
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 67/209 (32%), Positives = 116/209 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + ++ + VKLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQE---KRVKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYS-WDNAQVI---LVGN 135
Query: 361 KCDLPDRQV---EINEIEA------VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICS 411
KCD+ + +V E ++ A + + Y++ + E S+KE++ + + LVD I C
Sbjct: 136 KCDMEEERVVPTEKGQLLAEQLGMYMTYLYDWFDFFEASAKENISVRQAFERLVDAI-CD 194
Query: 412 KRMEEEAVERKSSIRLSEETLRDDQPKKL 440
K M + S + S+ T D P L
Sbjct: 195 K-MSDTLDTDPSVLGTSKNTRLSDTPPLL 222
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + ++ + VKLQIWD
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQE---KRVKLQIWD 77
>ZFIN|ZDB-GENE-040718-263 [details] [associations]
symbol:rab3c "RAB3C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-263 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 OMA:RLVDLIC
EMBL:BX510928 IPI:IPI00489060 UniGene:Dr.33726 SMR:A8WHV3
Ensembl:ENSDART00000132687 Uniprot:A8WHV3
Length = 224
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 69/203 (33%), Positives = 116/203 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + +K + +KLQIWD A
Sbjct: 27 FKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YKN--DKRIKLQIWDTA 83
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF +V W + + DN ++ L +
Sbjct: 84 GQERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQIKTYS-WDNAQVI---LAGN 139
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
KCD+ + R V ++ + Q F + E S+K+++ ++ + + LVD IIC K +E
Sbjct: 140 KCDMEEERIVSVDSGRLLAEQLGF-EFFETSAKDNINVKQTFDRLVD-IICDKMSDTLEA 197
Query: 417 E--AVERKSSIRLSEETLRDDQP 437
+ A S RL+E T QP
Sbjct: 198 DPAAAGGTPSARLTE-TPAPPQP 219
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + +K + +KLQIWD
Sbjct: 27 FKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YKN--DKRIKLQIWD 81
>UNIPROTKB|Q3T0F5 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090383 "phagosome
acidification" evidence=ISS] [GO:0045022 "early endosome to late
endosome transport" evidence=ISS] [GO:0005770 "late endosome"
evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC102415
IPI:IPI00704752 RefSeq:NP_001030253.1 UniGene:Bt.41314
ProteinModelPortal:Q3T0F5 SMR:Q3T0F5 STRING:Q3T0F5 PRIDE:Q3T0F5
GeneID:509970 KEGG:bta:509970 CTD:7879 InParanoid:Q3T0F5 KO:K07897
OrthoDB:EOG4QFWF4 NextBio:20869222 Uniprot:Q3T0F5
Length = 207
Score = 272 (100.8 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 55/163 (33%), Positives = 94/163 (57%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLV 405
DL +RQV +A C+ N + + E S+KE + +E + +V
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIV 170
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>WB|WBGene00004278 [details] [associations]
symbol:rab-19 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL132865 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OMA:LIGDCGT HSSP:P32939
RefSeq:NP_502576.1 ProteinModelPortal:Q9U1W9 SMR:Q9U1W9
EnsemblMetazoa:Y62E10A.9.1 EnsemblMetazoa:Y62E10A.9.2
EnsemblMetazoa:Y62E10A.9.3 EnsemblMetazoa:Y62E10A.9.4 GeneID:178301
KEGG:cel:CELE_Y62E10A.9 UCSC:Y62E10A.9.2 CTD:178301
WormBase:Y62E10A.9 InParanoid:Q9U1W9 NextBio:900570 Uniprot:Q9U1W9
Length = 210
Score = 272 (100.8 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/185 (34%), Positives = 107/185 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD VGKT VQ F F+D T+GVDF+ K L G+ VKLQIWD
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLV---VDGKRVKLQIWDTG 67
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G ++ +D+T ++SF S+ +W D+ SK N L L+ +
Sbjct: 68 GQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDV-SKFAAPNVVKL---LIGT 123
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCDL D R +E E E + + +E S+K ++ ++++ FL I ++ ++ V
Sbjct: 124 KCDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNA--FLELATILKRQYDQGVV 181
Query: 420 ERKSS 424
E+ SS
Sbjct: 182 EQGSS 186
Score = 120 (47.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GD VGKT VQ F F+D T+GVDF+ K L G+ VKLQIWD
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLV---VDGKRVKLQIWD 65
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 272 (100.8 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 56/171 (32%), Positives = 105/171 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD GKT V F +++ + NT+GVDFS K ++ + G+ +KLQIWD A
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVE---GKQIKLQIWDTA 78
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G +I++D+T R SF ++ +W ++ + N ++ L+ +
Sbjct: 79 GQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEV-RRYTASNVLII---LVGN 134
Query: 361 KCDLPD-RQVEINEIEAVCHQY--NFMSWIEVSSKEHLMIEDSMNFLVDRI 408
KCDL + R+V+ E +C QY + +E S+KE++ +ED+ L + +
Sbjct: 135 KCDLEEQREVDFEEARQMC-QYIPEILFVMETSAKENMNVEDAFRCLANEL 184
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GD GKT V F +++ + NT+GVDFS K ++ + G+ +KLQIWD
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVE---GKQIKLQIWD 76
>UNIPROTKB|F1PDF8 [details] [associations]
symbol:RAB39B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 EMBL:AAEX03027097
Ensembl:ENSCAFT00000031217 Uniprot:F1PDF8
Length = 210
Score = 272 (100.8 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 60/165 (36%), Positives = 102/165 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDSTVGK+ ++ F + +F TVGVDF ++L+ + G+ +KLQIWD A
Sbjct: 7 FRLIVIGDSTVGKSCLIRRF-EGRFAQVSDPTVGVDFFSRLVEIEP--GKRIKLQIWDTA 63
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++R YY+NS G +++FD+TNR+SF++V +W L+ + + +L+
Sbjct: 64 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEW---LEETKVHVQPYQIVFVLVGH 120
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
KCDL RQV +E E + Y M +IE S+++ + +E + L
Sbjct: 121 KCDLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDL 164
>RGD|1565263 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1565263 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
OrthoDB:EOG4WQ13N EMBL:BC088443 IPI:IPI00200723
RefSeq:NP_001019497.1 UniGene:Rn.53184 ProteinModelPortal:Q5M7U5
PRIDE:Q5M7U5 Ensembl:ENSRNOT00000012280 GeneID:500088
KEGG:rno:500088 UCSC:RGD:1565263 InParanoid:Q5M7U5 NextBio:705052
Genevestigator:Q5M7U5 GermOnline:ENSRNOG00000009030 Uniprot:Q5M7U5
Length = 217
Score = 271 (100.5 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 61/213 (28%), Positives = 110/213 (51%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGKT VQ F + ++ +NT+GVDF+ + L + G+ VK+Q+WD A
Sbjct: 18 FKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSL---EIDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FESV W H+++ A L +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKY----GAANLVIMLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K DL + R V + + +Y ++ +E S+KE I++ + +I +
Sbjct: 131 KSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGE 190
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+ + +D P + T+C C
Sbjct: 191 SAQQGLP------QDSSPVLVAHVPSERTHCTC 217
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGKT VQ F + ++ +NT+GVDF+ + L + G+ VK+Q+WD
Sbjct: 18 FKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSL---EIDGKKVKMQVWD 72
>UNIPROTKB|Q86YS6 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0007030 "Golgi
organization" evidence=IMP] [GO:0035526 "retrograde transport,
plasma membrane to Golgi" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0006184 "GTP
catabolic process" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 EMBL:CH471052 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GermOnline:ENSG00000172780
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N CleanEx:HS_RAB41
EMBL:AY166852 EMBL:AK291014 EMBL:BC062319 IPI:IPI00329441
RefSeq:NP_001191812.1 RefSeq:NP_001191813.1 RefSeq:NP_001191814.1
RefSeq:NP_001191815.1 RefSeq:NP_940892.1 UniGene:Hs.381132
UniGene:Hs.546542 PDB:2HUP PDBsum:2HUP ProteinModelPortal:Q86YS6
SMR:Q86YS6 STRING:Q86YS6 PhosphoSite:Q86YS6 DMDM:74727944
PaxDb:Q86YS6 PRIDE:Q86YS6 Ensembl:ENST00000315150
Ensembl:ENST00000393304 Ensembl:ENST00000393305
Ensembl:ENST00000393307 Ensembl:ENST00000393308 GeneID:339122
KEGG:hsa:339122 UCSC:uc003eln.2 CTD:339122 GeneCards:GC03M128806
HGNC:HGNC:19983 HPA:HPA046840 neXtProt:NX_Q86YS6
PharmGKB:PA134968262 InParanoid:Q86YS6 KO:K07930 OMA:LIGDCGT
EvolutionaryTrace:Q86YS6 GenomeRNAi:339122 NextBio:97235
ArrayExpress:Q86YS6 Bgee:Q86YS6 CleanEx:HS_RAB43
Genevestigator:Q86YS6 Uniprot:Q86YS6
Length = 212
Score = 271 (100.5 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 57/161 (35%), Positives = 99/161 (61%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD A
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQ---GKRVKLQIWDTA 75
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G I+ +D+T R SF SV W D+ G+ + LL+ +
Sbjct: 76 GQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA----GSNIVQLLIGN 131
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
K DL + R+V + E +++ Y+ + IE S+K+ +E++
Sbjct: 132 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEA 172
Score = 119 (46.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQ---GKRVKLQIWD 73
>UNIPROTKB|F1S5W6 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:CU855518
Ensembl:ENSSSCT00000014878 Uniprot:F1S5W6
Length = 227
Score = 271 (100.5 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 65/186 (34%), Positives = 106/186 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 31 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 86
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWSTQIKTYS-WDNAQVI---LVG 142
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V E + F + E S+KE++ ++ LVD IIC K E+
Sbjct: 143 NKCDLEDERVVPTEEGRRLADDLGF-EFFEASAKENINVKQVFERLVD-IICEKM--NES 198
Query: 419 VERKSS 424
+E SS
Sbjct: 199 LEPSSS 204
>MGI|MGI:103292 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:103292
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:401409
OMA:RNSLHLY OrthoDB:EOG4WQ13N EMBL:X80473 EMBL:AB232613
EMBL:BC032936 EMBL:M79309 IPI:IPI00116775 PIR:JH0649 PIR:PC4012
RefSeq:NP_035356.1 UniGene:Mm.123866 ProteinModelPortal:P35294
SMR:P35294 PhosphoSite:P35294 PRIDE:P35294
Ensembl:ENSMUST00000031986 GeneID:19331 KEGG:mmu:19331
UCSC:uc009blp.1 InParanoid:P35294 NextBio:296311 Bgee:P35294
CleanEx:MM_RAB19 Genevestigator:P35294
GermOnline:ENSMUSG00000029923 Uniprot:P35294
Length = 217
Score = 270 (100.1 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 63/213 (29%), Positives = 111/213 (52%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGKT VQ F + ++ +NT+GVDF+ + L + G+ VK+Q+WD A
Sbjct: 18 FKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSL---EIDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FESV W H+++ A L +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKY----GAANLVIMLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K DL + R V + + ++ ++ +E S+KE I++ + +I +
Sbjct: 131 KSDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGE 190
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+ LS+ D P + ST C C
Sbjct: 191 SAQQG--LSQ----DSSPVLVAQVPNESTRCTC 217
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGKT VQ F + ++ +NT+GVDF+ + L + G+ VK+Q+WD
Sbjct: 18 FKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSL---EIDGKKVKMQVWD 72
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 270 (100.1 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 59/197 (29%), Positives = 115/197 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ ++I GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 118 (46.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ ++I GDS VGK+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>FB|FBgn0025382 [details] [associations]
symbol:Rab27 "Rab27" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
eggNOG:COG1100 HSSP:P01112 ChiTaRS:RAB27A KO:K07976 EMBL:AL031027
GeneTree:ENSGT00700000104288 EMBL:BT125812 PIR:T13599
RefSeq:NP_726743.1 UniGene:Dm.14 SMR:O76901 DIP:DIP-21950N
IntAct:O76901 MINT:MINT-822877 EnsemblMetazoa:FBtr0070293
GeneID:31103 KEGG:dme:Dmel_CG14791 UCSC:CG14791-RB CTD:31103
FlyBase:FBgn0025382 InParanoid:O76901 OMA:ACTGANV OrthoDB:EOG4VT4DB
GenomeRNAi:31103 NextBio:771952 Uniprot:O76901
Length = 236
Score = 270 (100.1 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 64/204 (31%), Positives = 114/204 (55%)
Query: 244 LITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP-VKLQIWDIAGQ 302
L+ GDS VGKT + + +F + +TVG+DF K L + G R + LQIWD AGQ
Sbjct: 21 LVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQ 80
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ +Y+++ G +++FDLT+ KSF W L + ++ ++ C +KC
Sbjct: 81 ERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLC---GNKC 137
Query: 363 DLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
DL R V +++ A+C +Y + +IE S+ +++++ LV R++ +R+E A R
Sbjct: 138 DLLQLRVVSRDQVAALCRRYR-LPYIETSACTGANVKEAVELLVGRVM--ERIENAACNR 194
Query: 422 KSSIRLSEE----TLRDDQPKKLV 441
+ S+ L++ + QP+ LV
Sbjct: 195 EFSLLLTQSRCLPNIAYGQPEDLV 218
>ZFIN|ZDB-GENE-040927-2 [details] [associations]
symbol:zgc:100918 "zgc:100918" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040927-2 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 OrthoDB:EOG4QFWF4
GeneTree:ENSGT00700000104345 EMBL:CABZ01063557 EMBL:CABZ01063558
EMBL:CABZ01063559 EMBL:CABZ01063560 EMBL:BC082296 IPI:IPI00484756
RefSeq:NP_001005591.1 UniGene:Dr.45927 SMR:Q641M4 STRING:Q641M4
Ensembl:ENSDART00000113926 Ensembl:ENSDART00000123608 GeneID:449549
KEGG:dre:449549 InParanoid:Q641M4 NextBio:20832667 Uniprot:Q641M4
Length = 205
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 60/195 (30%), Positives = 105/195 (53%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
DL +RQV +A C + + + E S+KE + ++ + + R + E E +
Sbjct: 128 DLENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIA-RNALKQESEVETYDFP 186
Query: 423 SSIRLSEETLRDDQP 437
I+L RDD+P
Sbjct: 187 DQIKL-----RDDRP 196
Score = 119 (46.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>FB|FBgn0005586 [details] [associations]
symbol:Rab3 "Rab3" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0015031
"protein transport" evidence=IEA;NAS] [GO:0008021 "synaptic
vesicle" evidence=IDA;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0048786 "presynaptic active
zone" evidence=IDA] [GO:0048790 "maintenance of presynaptic active
zone structure" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0030054 GO:GO:0008021
GO:GO:0048786 GO:GO:0006887 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 KO:K07976 GeneTree:ENSGT00690000101942 GO:GO:0048790
EMBL:M64621 EMBL:AB112932 EMBL:AY060449 PIR:JH0425
RefSeq:NP_523687.1 UniGene:Dm.2584 ProteinModelPortal:P25228
SMR:P25228 DIP:DIP-20159N MINT:MINT-946687 STRING:P25228
PaxDb:P25228 PRIDE:P25228 EnsemblMetazoa:FBtr0088257 GeneID:36127
KEGG:dme:Dmel_CG7576 CTD:36127 FlyBase:FBgn0005586
InParanoid:P25228 OMA:RLVDLIC OrthoDB:EOG4TDZ29 PhylomeDB:P25228
ChiTaRS:Rab3 GenomeRNAi:36127 NextBio:796987 Bgee:P25228
GermOnline:CG7576 Uniprot:P25228
Length = 220
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 64/177 (36%), Positives = 101/177 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK-LLSHKKYGGRPVKLQIWDI 299
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H K VKLQIWD
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKR----VKLQIWDT 77
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G I+M+D+TN SF SV W + + DN ++ L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYS-WDNAQVI---LVG 133
Query: 360 SKCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
+KCD+ D++V + Q + + E S+KE++ ++ LVD IIC K E
Sbjct: 134 NKCDMEDQRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVD-IICDKMSE 188
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK-LLSHKKYGGRPVKLQIWD 228
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + H K VKLQIWD
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKR----VKLQIWD 76
>UNIPROTKB|F1NVC7 [details] [associations]
symbol:LOC771782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345
OMA:LHQYVHK GO:GO:0034164 EMBL:AADN02044938 IPI:IPI00681453
ProteinModelPortal:F1NVC7 Ensembl:ENSGALT00000035212 Uniprot:F1NVC7
Length = 183
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 57/162 (35%), Positives = 94/162 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
I+I G VGKTS + +V F ++Y+ T+G TK+++ K P+KLQIWD GQ
Sbjct: 27 IIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVDK---TPLKLQIWDTGGQ 83
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGC++ FD+T+ +SFE++ W+ D K ++ P ++L +K
Sbjct: 84 ERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEK-VIPRDHDFPMVVLGNKI 142
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
DL DRQV A C + + + + EVS+K ++ + + L
Sbjct: 143 DLCDRQVSKEIASAWCKEKD-IPYFEVSAKNNINVAQAFETL 183
>UNIPROTKB|Q08DE8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS] [GO:0032755
"positive regulation of interleukin-6 production" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=ISS] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISS] [GO:0034499 "late endosome to Golgi transport"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
EMBL:BC123789 IPI:IPI00713620 RefSeq:NP_001071481.1
UniGene:Bt.11413 ProteinModelPortal:Q08DE8 STRING:Q08DE8
Ensembl:ENSBTAT00000016976 GeneID:538050 KEGG:bta:538050 CTD:338382
InParanoid:Q08DE8 KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D
NextBio:20877271 GO:GO:0034164 Uniprot:Q08DE8
Length = 200
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 65/196 (33%), Positives = 107/196 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F ++Y+ T+G +K++ + +KLQIWD GQ
Sbjct: 11 LIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILED---TTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGC++ FD+T+ +SFE++ W+ D+ +K I P ++L +K
Sbjct: 68 ERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTI-PMEQPYPMVVLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
DL DRQV + C + + + + EVS+K + + + L R + R E+
Sbjct: 127 DLEDRQVPQEVAQGWCKEKD-IPYFEVSAKNDINVVQAFEMLASRALSRYRSILESY-LT 184
Query: 423 SSIRLSEETLRDDQPK 438
SI+LS E DQPK
Sbjct: 185 DSIKLSPE----DQPK 196
>RGD|620924 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA;ISO] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA;ISO] [GO:0030133 "transport vesicle" evidence=IDA]
[GO:0042588 "zymogen granule" evidence=IEA;ISO] [GO:0051020 "GTPase
binding" evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620924 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 UniGene:Rn.9822
CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:U90206 EMBL:BC081741
EMBL:S68808 EMBL:M83681 IPI:IPI00213685 PIR:I67631
RefSeq:NP_542147.1 ProteinModelPortal:Q63942 SMR:Q63942
IntAct:Q63942 STRING:Q63942 PhosphoSite:Q63942 PRIDE:Q63942
Ensembl:ENSRNOT00000015609 GeneID:140665 KEGG:rno:140665
UCSC:RGD:620924 InParanoid:Q63942 NextBio:620635
Genevestigator:Q63942 GermOnline:ENSRNOG00000011582 Uniprot:Q63942
Length = 219
Score = 269 (99.8 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 64/186 (34%), Positives = 107/186 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V + + + F + E S+KE++ ++ LVD IIC K E+
Sbjct: 135 NKCDLEDERVVSAEDGQRLAGDLGF-EFFEASAKENINVKQVFERLVD-IICDKM--NES 190
Query: 419 VERKSS 424
+E SS
Sbjct: 191 LEPSSS 196
>UNIPROTKB|E1C0F3 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0007174 "epidermal growth factor
catabolic process" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003 CTD:7879
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH GO:GO:0007174
EMBL:AADN02014058 EMBL:AADN02014057 IPI:IPI00601244
RefSeq:XP_003642026.1 RefSeq:XP_414359.1 UniGene:Gga.5872
PRIDE:E1C0F3 Ensembl:ENSGALT00000009495 GeneID:416016
KEGG:gga:416016 NextBio:20819533 Uniprot:E1C0F3
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|F1MJQ1 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003
IPI:IPI00704752 UniGene:Bt.41314 GeneTree:ENSGT00700000104345
OMA:SPRDPEH GO:GO:0007174 EMBL:DAAA02054678
Ensembl:ENSBTAT00000013451 Uniprot:F1MJQ1
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|P18067 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0090385 "phagosome-lysosome fusion" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IMP] [GO:0005770 "late endosome" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0005770 GO:GO:0033365 GO:GO:0008333
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 EMBL:M35522 PIR:B30413 RefSeq:NP_001003316.1
UniGene:Cfa.45048 ProteinModelPortal:P18067 SMR:P18067
STRING:P18067 PRIDE:P18067 Ensembl:ENSCAFT00000038482 GeneID:404007
KEGG:cfa:404007 GeneTree:ENSGT00700000104345 InParanoid:P18067
OMA:SPRDPEH BindingDB:P18067 NextBio:20817494 GO:GO:0007174
Uniprot:P18067
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|P51149 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045453 "bone resorption"
evidence=IEA] [GO:0048365 "Rac GTPase binding" evidence=IEA]
[GO:0097208 "alveolar lamellar body" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0045022 "early endosome to
late endosome transport" evidence=IMP] [GO:0015031 "protein
transport" evidence=TAS] [GO:0005770 "late endosome" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=TAS] [GO:0005764
"lysosome" evidence=IDA] [GO:0006897 "endocytosis" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0006622 "protein targeting to lysosome"
evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007174 "epidermal growth factor catabolic
process" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0045335
Pathway_Interaction_DB:il12_2pathway GO:GO:0005765 GO:GO:0019886
EMBL:CH471052 GO:GO:0003924 GO:GO:0006897 GO:GO:0005770
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 GO:GO:0006622
eggNOG:COG1100 GO:GO:0019003 GO:GO:0090382 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:7879 KO:K07897 OrthoDB:EOG4QFWF4
OMA:SPRDPEH GO:GO:0007174 EMBL:X93499 EMBL:U44104 EMBL:AF050175
EMBL:AF498942 EMBL:AK000826 EMBL:AK290721 EMBL:BC008721
IPI:IPI00016342 PIR:JC5268 RefSeq:NP_004628.4 UniGene:Hs.741172
PDB:1T91 PDB:1YHN PDB:3LAW PDBsum:1T91 PDBsum:1YHN PDBsum:3LAW
ProteinModelPortal:P51149 SMR:P51149 DIP:DIP-39879N IntAct:P51149
MINT:MINT-4999676 STRING:P51149 PhosphoSite:P51149 DMDM:1709999
PaxDb:P51149 PeptideAtlas:P51149 PRIDE:P51149 DNASU:7879
Ensembl:ENST00000265062 GeneID:7879 KEGG:hsa:7879 UCSC:uc003eks.1
GeneCards:GC03P128444 HGNC:HGNC:9788 HPA:HPA006964 MIM:600882
MIM:602298 neXtProt:NX_P51149 Orphanet:99936 PharmGKB:PA162400619
InParanoid:P51149 PhylomeDB:P51149 ChiTaRS:RAB7A
EvolutionaryTrace:P51149 GenomeRNAi:7879 NextBio:30336
ArrayExpress:P51149 Bgee:P51149 CleanEx:HS_RAB7A
Genevestigator:P51149 GermOnline:ENSG00000075785 Uniprot:P51149
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|Q5R9Y4 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9601
"Pongo abelii" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 HOVERGEN:HBG009351
CTD:7879 KO:K07897 EMBL:CR859246 RefSeq:NP_001127416.1
UniGene:Pab.19044 HSSP:P09527 ProteinModelPortal:Q5R9Y4 SMR:Q5R9Y4
PRIDE:Q5R9Y4 GeneID:100174486 KEGG:pon:100174486 Uniprot:Q5R9Y4
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>MGI|MGI:105068 [details] [associations]
symbol:Rab7 "RAB7, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764 "lysosome"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005770
"late endosome" evidence=ISO;IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0007174 "epidermal growth
factor catabolic process" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008333 "endosome
to lysosome transport" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0045453 "bone resorption"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0090383 "phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] [GO:0097208 "alveolar
lamellar body" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105068 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0045335
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0033365
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 KO:K07897
OrthoDB:EOG4QFWF4 OMA:SPRDPEH GO:GO:0007174 EMBL:X89650
EMBL:AK005004 EMBL:BC004597 EMBL:BC086793 IPI:IPI00408892
PIR:S62733 RefSeq:NP_033031.2 UniGene:Mm.333233 UniGene:Mm.486309
ProteinModelPortal:P51150 SMR:P51150 STRING:P51150
PhosphoSite:P51150 PaxDb:P51150 PRIDE:P51150
Ensembl:ENSMUST00000095048 Ensembl:ENSMUST00000113596
Ensembl:ENSMUST00000113597 Ensembl:ENSMUST00000113598
Ensembl:ENSMUST00000113600 GeneID:19349 KEGG:mmu:19349 CTD:19349
InParanoid:P51150 NextBio:296377 Bgee:P51150 CleanEx:MM_RAB7
Genevestigator:P51150 Uniprot:P51150
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>RGD|61908 [details] [associations]
symbol:Rab7a "RAB7A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late endosome"
evidence=ISO;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO;ISS] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone resorption"
evidence=IMP] [GO:0048365 "Rac GTPase binding" evidence=IPI]
[GO:0090383 "phagosome acidification" evidence=ISO;ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO;ISS] [GO:0097208 "alveolar
lamellar body" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:61908 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0045453
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
EMBL:X12535 EMBL:AF286535 EMBL:AB158427 EMBL:AB158428 EMBL:BC072470
IPI:IPI00215564 PIR:S01934 RefSeq:NP_076440.1 UniGene:Rn.1425
PDB:1VG0 PDB:1VG1 PDB:1VG8 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG1
PDBsum:1VG8 PDBsum:1VG9 ProteinModelPortal:P09527 SMR:P09527
IntAct:P09527 MINT:MINT-1775656 STRING:P09527 PhosphoSite:P09527
PRIDE:P09527 Ensembl:ENSRNOT00000016432 GeneID:29448 KEGG:rno:29448
UCSC:RGD:61908 InParanoid:P09527 EvolutionaryTrace:P09527
NextBio:609213 Genevestigator:P09527 GermOnline:ENSRNOG00000012247
Uniprot:P09527
Length = 207
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A C+ N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|F1P1G4 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:LIGDCGT
EMBL:AADN02013932 IPI:IPI00591348 ProteinModelPortal:F1P1G4
Ensembl:ENSGALT00000008038 Uniprot:F1P1G4
Length = 212
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 57/162 (35%), Positives = 102/162 (62%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD A
Sbjct: 18 FKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQ---GKRVKLQIWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G I+ +D++ R SF S+ +W D+ G+ + LL+ +
Sbjct: 75 GQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYA----GSNIVQLLIGN 130
Query: 361 KCDLPD-RQVEINEIEAVCHQY-NFMSWIEVSSKEHLMIEDS 400
K DL D R+V++ E +++ +Y N + IE S+K+ +E++
Sbjct: 131 KSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEA 172
Score = 119 (46.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 172 LILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
L+LI GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD
Sbjct: 20 LVLI-GDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQ---GKRVKLQIWD 72
>UNIPROTKB|E1BNX1 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:9545 KO:K07884 OMA:GKGPTLG
EMBL:DAAA02019486 IPI:IPI00709014 RefSeq:NP_001178304.1
UniGene:Bt.20052 Ensembl:ENSBTAT00000002783 GeneID:100139105
KEGG:bta:100139105 NextBio:20790194 Uniprot:E1BNX1
Length = 219
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 64/186 (34%), Positives = 106/186 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V E + F + E S+KE++ ++ LVD +IC K E+
Sbjct: 135 NKCDLEDERVVPTEEGRRLADDLGF-EFFEASAKENINVKQVFERLVD-VICEKM--NES 190
Query: 419 VERKSS 424
+E SS
Sbjct: 191 LEPSSS 196
>MGI|MGI:2442855 [details] [associations]
symbol:Rab39 "RAB39, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0090383 "phagosome
acidification" evidence=ISO] [GO:0090385 "phagosome-lysosome
fusion" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2442855 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 CleanEx:MM_RAB39 KO:K07924 OMA:VEDGWDG
OrthoDB:EOG43JC5J EMBL:AK049038 EMBL:AK053487 EMBL:BC049787
IPI:IPI00221836 RefSeq:NP_780771.1 UniGene:Mm.290285
ProteinModelPortal:Q8BHD0 SMR:Q8BHD0 STRING:Q8BHD0
PhosphoSite:Q8BHD0 PaxDb:Q8BHD0 PRIDE:Q8BHD0
Ensembl:ENSMUST00000068449 GeneID:270160 KEGG:mmu:270160 CTD:270160
InParanoid:Q8BHD0 NextBio:393265 Bgee:Q8BHD0 Genevestigator:Q8BHD0
GermOnline:ENSMUSG00000055069 Uniprot:Q8BHD0
Length = 217
Score = 268 (99.4 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 66/177 (37%), Positives = 100/177 (56%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKN----TVGVDFSTKLLSHKKYG 288
+ I I + +++ GDSTVGK+ + F Q +F + TVGVDF ++LL +
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLHSPACDPTVGVDFFSRLLEIEP-- 58
Query: 289 GRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD 348
G+ +KLQ+WD AGQ+R+ ++R YY+NS G ++FD+TNR+SFE V W L+ +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDW---LEEAKMHV 115
Query: 349 NGAMLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ LL+ KCDL RQV E E + M +IE S+K+ +E+S L
Sbjct: 116 QPFQIVFLLVGHKCDLASQRQVSREEAERLSTDCG-MKYIETSAKDATNVEESFTIL 171
>ZFIN|ZDB-GENE-040426-1352 [details] [associations]
symbol:rab7 "RAB7, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-1352 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P35278 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 CTD:19349
OMA:FETSAKV EMBL:CR854846 EMBL:BC054602 EMBL:BC155202
IPI:IPI00486424 RefSeq:NP_957222.1 UniGene:Dr.12260 SMR:Q7T2C6
STRING:Q7T2C6 Ensembl:ENSDART00000027014 GeneID:393902
KEGG:dre:393902 InParanoid:Q7T2C6 NextBio:20814880 Uniprot:Q7T2C6
Length = 207
Score = 267 (99.0 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 61/196 (31%), Positives = 104/196 (53%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
DL +RQV +A C N + + E S+KE + +E + + + + E E
Sbjct: 128 DLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFP 187
Query: 423 SSIRLSEETLRDDQPK 438
I+L R+D+ K
Sbjct: 188 EPIKLD----RNDRAK 199
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>UNIPROTKB|E2RP90 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 KO:K07930 OMA:LIGDCGT
EMBL:AAEX03012024 RefSeq:XP_003639768.1 ProteinModelPortal:E2RP90
Ensembl:ENSCAFT00000006967 GeneID:100856686 KEGG:cfa:100856686
Uniprot:E2RP90
Length = 212
Score = 267 (99.0 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 57/161 (35%), Positives = 98/161 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD A
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQ---GKRVKLQIWDTA 75
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G I+ +D+T R SF SV W D+ G+ + LL+ +
Sbjct: 76 GQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA----GSNIVQLLIGN 131
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
K DL R+V + E +++ Y+ + IE S+K+ +E++
Sbjct: 132 KSDLGQLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEA 172
Score = 119 (46.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GD++VGKT VQ F F + +T+GVDF+ K L + G+ VKLQIWD
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQ---GKRVKLQIWD 73
>MGI|MGI:97844 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IDA] [GO:0030133 "transport vesicle" evidence=ISO]
[GO:0042588 "zymogen granule" evidence=IDA] [GO:0051020 "GTPase
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97844 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:M89777
EMBL:AF263365 EMBL:AF263366 EMBL:BC010779 EMBL:BC020010
IPI:IPI00116688 PIR:A45384 RefSeq:NP_114080.2 UniGene:Mm.260157
ProteinModelPortal:P35276 SMR:P35276 IntAct:P35276 STRING:P35276
PhosphoSite:P35276 PaxDb:P35276 PRIDE:P35276
Ensembl:ENSMUST00000115351 Ensembl:ENSMUST00000122211 GeneID:19340
KEGG:mmu:19340 InParanoid:P35276 NextBio:296343 Bgee:P35276
CleanEx:MM_RAB3D Genevestigator:P35276
GermOnline:ENSMUSG00000019066 Uniprot:P35276
Length = 219
Score = 267 (99.0 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 64/186 (34%), Positives = 106/186 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V + + F + E S+KE++ ++ LVD IIC K E+
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGF-EFFEASAKENINVKQVFERLVD-IICDKM--NES 190
Query: 419 VERKSS 424
+E SS
Sbjct: 191 LEPSSS 196
>RGD|1311286 [details] [associations]
symbol:Rab39a "RAB39A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0090383
"phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1311286 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 EMBL:CH473975
GeneTree:ENSGT00690000101664 CTD:54734 KO:K07924 OMA:VEDGWDG
OrthoDB:EOG43JC5J IPI:IPI00203760 RefSeq:NP_001101618.1
UniGene:Rn.228440 Ensembl:ENSRNOT00000011913 GeneID:315668
KEGG:rno:315668 UCSC:RGD:1311286 NextBio:669630 Uniprot:D3ZZP2
Length = 217
Score = 267 (99.0 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 67/177 (37%), Positives = 101/177 (57%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKF--LDN--YKNTVGVDFSTKLLSHKKYG 288
+ I I + +++ GDSTVGK+ + F Q +F L + TVGVDF ++LL +
Sbjct: 1 MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEP-- 58
Query: 289 GRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD 348
G+ +KLQ+WD AGQ+R+ ++R YY+NS G ++FD+TNR+SFE V W L+ +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDW---LEEAKMHV 115
Query: 349 NGAMLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ LL+ KCDL RQV E E + M +IE S+K+ +E+S L
Sbjct: 116 QPFQIVFLLVGHKCDLASQRQVSREEAEKLSKDCG-MKYIETSAKDATNVEESFTIL 171
>TAIR|locus:2199716 [details] [associations]
symbol:RABG3B "RAB GTPase homolog G3B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0010089 "xylem development" evidence=IMP]
[GO:0010508 "positive regulation of autophagy" evidence=IMP]
[GO:0010623 "developmental programmed cell death" evidence=IMP]
[GO:0048102 "autophagic cell death" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0007264
GO:GO:0015031 GO:GO:0010508 PROSITE:PS51419 GO:GO:0010089
eggNOG:COG1100 GO:GO:0048102 GO:GO:0010623 EMBL:AC003979
EMBL:Y12227 KO:K07976 HOGENOM:HOG000233968 EMBL:AB071850
EMBL:Y09821 EMBL:BT024589 IPI:IPI00534402 PIR:T00770
RefSeq:NP_173688.1 UniGene:At.20067 ProteinModelPortal:O04157
SMR:O04157 STRING:O04157 PaxDb:O04157 PRIDE:O04157
EnsemblPlants:AT1G22740.1 GeneID:838880 KEGG:ath:AT1G22740
TAIR:At1g22740 InParanoid:O04157 OMA:CIAKLAL PhylomeDB:O04157
ProtClustDB:CLSN2914412 Genevestigator:O04157 GermOnline:AT1G22740
Uniprot:O04157
Length = 203
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 58/177 (32%), Positives = 98/177 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V NKF YK T+G DF TK L + R V LQIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKEL---QIDDRLVTLQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+ + KSFES+ W ++ ++ + P +LL +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKV 127
Query: 363 DLP---DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
D+ R V + C + + + E S+KE ++DS + + ++R ++
Sbjct: 128 DIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQD 184
Score = 131 (51.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/56 (51%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V NKF YK T+G DF TK L + R V LQIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKEL---QIDDRLVTLQIWD 63
Score = 128 (50.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 107 TVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
T+LK++++GDS VGKTS + +V NKF YK T+G DF TK L
Sbjct: 7 TLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKEL 50
>FB|FBgn0015795 [details] [associations]
symbol:Rab7 "Rab7" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0016197
"endosomal transport" evidence=IMP;TAS] [GO:0005770 "late endosome"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IGI;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0033227 "dsRNA transport"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0048190
"wing disc dorsal/ventral pattern formation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0048190 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 GO:GO:0044130 GO:GO:0008333 GO:GO:0033227
GO:GO:0035071 eggNOG:COG1100 KO:K07897 GeneTree:ENSGT00700000104345
OMA:SPRDPEH CTD:19349 HSSP:P32939 EMBL:AF079459 EMBL:AF263363
EMBL:AY060236 EMBL:BT124755 EMBL:AB035672 EMBL:AM294823
EMBL:AM294824 EMBL:AM294825 EMBL:AM294826 EMBL:AM294827
EMBL:AM294828 EMBL:AM294829 EMBL:AM294830 EMBL:AM294831
EMBL:AM294832 EMBL:AM294833 EMBL:FM245635 EMBL:FM245636
EMBL:FM245637 EMBL:FM245638 EMBL:FM245639 EMBL:FM245640
EMBL:FM245641 EMBL:FM245642 EMBL:FM245643 EMBL:FM245644
EMBL:FM245645 RefSeq:NP_001247276.1 RefSeq:NP_001247277.1
RefSeq:NP_524472.1 UniGene:Dm.1701 SMR:O76742 MINT:MINT-1017301
STRING:O76742 EnsemblMetazoa:FBtr0084503 EnsemblMetazoa:FBtr0308611
EnsemblMetazoa:FBtr0308612 GeneID:42841 KEGG:dme:Dmel_CG5915
UCSC:CG5915-RA FlyBase:FBgn0015795 InParanoid:O76742
OrthoDB:EOG4Q2BXM GenomeRNAi:42841 NextBio:830855 Uniprot:O76742
Length = 207
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 58/176 (32%), Positives = 99/176 (56%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS+VGKTS + +V +F + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVV---VNDRVVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+T SF+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKV 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
DL +RQV + C N + + E S+KE + +E M F ++I +E EA
Sbjct: 128 DLDNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVE--MAF---QVIAKNALELEA 178
Score = 121 (47.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS+VGKTS + +V +F + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVV---VNDRVVTMQIWD 63
Score = 120 (47.3 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
+++LK++++GDS+VGKTS + +V +F + YK T+G DF TK
Sbjct: 6 KSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTK 48
>ASPGD|ASPL0000062908 [details] [associations]
symbol:avaA species:162425 "Emericella nidulans"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0072665 "protein localization to vacuole" evidence=IEA]
[GO:0061191 "positive regulation of vacuole fusion, non-autophagic"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0031321
"ascospore-type prospore assembly" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0051469 "vesicle fusion with vacuole"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 HOGENOM:HOG000233968 OMA:SPRDPEH
ProteinModelPortal:C8VQY7 SMR:C8VQY7 EnsemblFungi:CADANIAT00002661
Uniprot:C8VQY7
Length = 205
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 57/194 (29%), Positives = 103/194 (53%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF +YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVL---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+ N KSFE++ W+ + + + P +++ +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVIGNKI 127
Query: 363 DLPDRQVEINEIEAV--CHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
D+ + + I+ A+ C + + E S+KE + +E + + + + EE +
Sbjct: 128 DMEESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAEEYGGD 187
Query: 421 RKSSIRLSEETLRD 434
I + + T RD
Sbjct: 188 YTDPINIHDTTERD 201
Score = 118 (46.6 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF +YK T+G DF TK
Sbjct: 3 SRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTK 48
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF +YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVL---VDDRLVTMQIWD 63
>WB|WBGene00004267 [details] [associations]
symbol:rab-3 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0007617 "mating behavior" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0008021 "synaptic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0003924 GO:GO:0007617 GO:GO:0040017 GO:GO:0007271
GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + G + VKLQIWD A
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFR---GDKRVKLQIWDTA 93
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF SV W + + +N ++ L+ +
Sbjct: 94 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYS-WENAQVV---LVGN 149
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ +R V ++ + Q + + E S+KE++ ++ LV+ IIC K E
Sbjct: 150 KCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENINVKAVFEKLVE-IICDKMAE 203
Score = 131 (51.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 156 GGRPYGTF--SPIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKL 211
GG+P G P Q Y+ +LI G+S+VGKTS++ + + F + +TVG+DF K
Sbjct: 18 GGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT 77
Query: 212 LSHKKYGGRPVKLQIWD 228
+ G + VKLQIWD
Sbjct: 78 VFR---GDKRVKLQIWD 91
>UNIPROTKB|Q94986 [details] [associations]
symbol:rab-3 "Ras-related protein Rab-3" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0003924 GO:GO:0007617
GO:GO:0040017 GO:GO:0007271 GO:GO:0006935 GO:GO:0043051
GO:GO:0006887 PROSITE:PS51419 eggNOG:COG1100 EMBL:FO080599
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
EMBL:U68265 EMBL:U68266 EMBL:AB112928 RefSeq:NP_001021974.1
UniGene:Cel.19709 ProteinModelPortal:Q94986 SMR:Q94986
STRING:Q94986 PaxDb:Q94986 PRIDE:Q94986 EnsemblMetazoa:C18A3.6b.1
EnsemblMetazoa:C18A3.6b.2 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 WormBase:C18A3.6b NextBio:881917
ArrayExpress:Q94986 Uniprot:Q94986
Length = 219
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + G + VKLQIWD A
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFR---GDKRVKLQIWDTA 79
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF SV W + + +N ++ L+ +
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYS-WENAQVV---LVGN 135
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ +R V ++ + Q + + E S+KE++ ++ LV+ IIC K E
Sbjct: 136 KCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENINVKAVFEKLVE-IICDKMAE 189
Score = 131 (51.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 156 GGRPYGTF--SPIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKL 211
GG+P G P Q Y+ +LI G+S+VGKTS++ + + F + +TVG+DF K
Sbjct: 4 GGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT 63
Query: 212 LSHKKYGGRPVKLQIWD 228
+ G + VKLQIWD
Sbjct: 64 VFR---GDKRVKLQIWD 77
>UNIPROTKB|Q95QV3 [details] [associations]
symbol:rab-3 "Protein RAB-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0003924 GO:GO:0007617 GO:GO:0040017
GO:GO:0007271 GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI G+S+VGKTS++ + + F + +TVG+DF K + G + VKLQIWD A
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFR---GDKRVKLQIWDTA 93
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G I+M+D+TN +SF SV W + + +N ++ L+ +
Sbjct: 94 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYS-WENAQVV---LVGN 149
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME 415
KCD+ +R V ++ + Q + + E S+KE++ ++ LV+ IIC K E
Sbjct: 150 KCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENINVKAVFEKLVE-IICDKMAE 203
Score = 131 (51.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 156 GGRPYGTF--SPIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKL 211
GG+P G P Q Y+ +LI G+S+VGKTS++ + + F + +TVG+DF K
Sbjct: 18 GGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKT 77
Query: 212 LSHKKYGGRPVKLQIWD 228
+ G + VKLQIWD
Sbjct: 78 VFR---GDKRVKLQIWD 91
>MGI|MGI:1917084 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917084 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AJ534465 IPI:IPI00468209 RefSeq:NP_001034483.1
UniGene:Mm.37380 ProteinModelPortal:Q8CG50 SMR:Q8CG50
PhosphoSite:Q8CG50 PaxDb:Q8CG50 PRIDE:Q8CG50
Ensembl:ENSMUST00000078647 GeneID:69834 KEGG:mmu:69834
InParanoid:Q8CG50 NextBio:330445 Bgee:Q8CG50 CleanEx:MM_RAB43
Genevestigator:Q8CG50 GermOnline:ENSMUSG00000030055 Uniprot:Q8CG50
Length = 210
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 57/170 (33%), Positives = 101/170 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GD++VGKT VQ F F +T+GVDF+ K L + G+ VKLQIWD A
Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQ---GKRVKLQIWDTA 73
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G I+ +D++ R +F SV W D+ G+ + LL+ +
Sbjct: 74 GQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYA----GSNIVQLLIGN 129
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
K DL D R+V + E +++ Y+ + IE S+K+ +E++ + +I
Sbjct: 130 KSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GD++VGKT VQ F F +T+GVDF+ K L + G+ VKLQIWD
Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQ---GKRVKLQIWD 71
>RGD|1565300 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0007030 "Golgi organization"
evidence=ISO;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO;ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0090382 "phagosome maturation"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1565300 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AY593256 IPI:IPI00204737 RefSeq:NP_001019502.1
UniGene:Rn.141443 ProteinModelPortal:Q53B90 SMR:Q53B90 PRIDE:Q53B90
Ensembl:ENSRNOT00000013299 GeneID:500249 KEGG:rno:500249
UCSC:RGD:1565300 InParanoid:Q53B90 NextBio:705573
Genevestigator:Q53B90 GermOnline:ENSRNOG00000037768 Uniprot:Q53B90
Length = 210
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 57/170 (33%), Positives = 101/170 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GD++VGKT VQ F F +T+GVDF+ K L + G+ VKLQIWD A
Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQ---GKRVKLQIWDTA 73
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY++++G I+ +D++ R +F SV W D+ G+ + LL+ +
Sbjct: 74 GQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYA----GSNIVQLLIGN 129
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
K DL D R+V + E +++ Y+ + IE S+K+ +E++ + +I
Sbjct: 130 KSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GD++VGKT VQ F F +T+GVDF+ K L + G+ VKLQIWD
Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQ---GKRVKLQIWD 71
>UNIPROTKB|E2RFR4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03012413
Ensembl:ENSCAFT00000027638 NextBio:20852320 Uniprot:E2RFR4
Length = 221
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 64/186 (34%), Positives = 106/186 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 25 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 80
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 81 AGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYS-WDNAQVI---LVG 136
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V + + F + E S+KE++ ++ LVD IIC K E+
Sbjct: 137 NKCDLEDERVVPTEDGRRLADDLGF-EFFEASAKENINVKQVFERLVD-IICEKM--NES 192
Query: 419 VERKSS 424
+E SS
Sbjct: 193 LEPSSS 198
>UNIPROTKB|O95716 [details] [associations]
symbol:RAB3D "Ras-related protein Rab-3D" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA] [GO:0042588 "zymogen granule"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 EMBL:AF081353 EMBL:AF498933 EMBL:BC016471
IPI:IPI00032808 RefSeq:NP_004274.1 UniGene:Hs.731663 PDB:2GF9
PDBsum:2GF9 ProteinModelPortal:O95716 SMR:O95716 IntAct:O95716
STRING:O95716 PhosphoSite:O95716 PaxDb:O95716 PRIDE:O95716
DNASU:9545 Ensembl:ENST00000222120 GeneID:9545 KEGG:hsa:9545
UCSC:uc002mqx.3 CTD:9545 GeneCards:GC19M011435 HGNC:HGNC:9779
HPA:CAB018067 MIM:604350 neXtProt:NX_O95716 PharmGKB:PA34134
InParanoid:O95716 KO:K07884 OMA:GKGPTLG PhylomeDB:O95716
EvolutionaryTrace:O95716 GenomeRNAi:9545 NextBio:35795 Bgee:O95716
CleanEx:HS_RAB3D Genevestigator:O95716 GermOnline:ENSG00000105514
Uniprot:O95716
Length = 219
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 63/186 (33%), Positives = 106/186 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCDL D R V + + F + E S+KE++ ++ LVD +IC K E+
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGF-EFFEASAKENINVKQVFERLVD-VICEKM--NES 190
Query: 419 VERKSS 424
+E SS
Sbjct: 191 LEPSSS 196
>UNIPROTKB|Q14964 [details] [associations]
symbol:RAB39A "Ras-related protein Rab-39A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=NAS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0090385
"phagosome-lysosome fusion" evidence=IMP] [GO:0090383 "phagosome
acidification" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CH471065 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HPA:HPA042715 HPA:HPA042505 HOGENOM:HOG000233968
CleanEx:HS_RAB39 EMBL:X99962 EMBL:AK292969 EMBL:BC028064
IPI:IPI00001618 RefSeq:NP_059986.1 UniGene:Hs.354906
ProteinModelPortal:Q14964 SMR:Q14964 IntAct:Q14964 STRING:Q14964
PhosphoSite:Q14964 DMDM:46577701 PaxDb:Q14964 PRIDE:Q14964
DNASU:54734 Ensembl:ENST00000320578 GeneID:54734 KEGG:hsa:54734
UCSC:uc001pjt.3 CTD:54734 GeneCards:GC11P107799 HGNC:HGNC:16521
neXtProt:NX_Q14964 PharmGKB:PA34130 InParanoid:Q14964 KO:K07924
OMA:VEDGWDG OrthoDB:EOG43JC5J PhylomeDB:Q14964 GenomeRNAi:54734
NextBio:57320 Bgee:Q14964 Genevestigator:Q14964
GermOnline:ENSG00000179331 Uniprot:Q14964
Length = 217
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 67/177 (37%), Positives = 103/177 (58%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKF--LDN--YKNTVGVDFSTKLLSHKKYG 288
+ I I + +++ GDSTVGK+ + F Q +F L + TVGVDF ++LL +
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEP-- 58
Query: 289 GRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD 348
G+ +KLQ+WD AGQ+R+ ++R YY+NS G ++FD+TNR+SFE V W + +K +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEE--AKMYVQ 116
Query: 349 NGAMLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
++ LL+ KCDL RQV E E + M +IE S+K+ +E+S L
Sbjct: 117 PFRIV-FLLVGHKCDLASQRQVTREEAEKLSADCG-MKYIETSAKDATNVEESFTIL 171
>UNIPROTKB|Q8HZJ5 [details] [associations]
symbol:RAB27B "Ras-related protein Rab-27B" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0032585 "multivesicular body membrane"
evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0071985
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM
EMBL:AY010899 IPI:IPI00718679 RefSeq:NP_777163.1 UniGene:Bt.12771
ProteinModelPortal:Q8HZJ5 SMR:Q8HZJ5 PRIDE:Q8HZJ5
Ensembl:ENSBTAT00000003613 GeneID:282858 KEGG:bta:282858 CTD:5874
InParanoid:Q8HZJ5 KO:K07886 OMA:QNVEKSV NextBio:20806387
Uniprot:Q8HZJ5
Length = 218
Score = 265 (98.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 70/219 (31%), Positives = 122/219 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG-----GRPVK--LQ 295
+L GDS VGKT+++ + NKF + TVG+DF K +++ G G+ K LQ
Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQ 71
Query: 296 IWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPC 355
+WD AGQ+R+ ++ +++++ G ++MFDLT+++SF +V W L + +N ++
Sbjct: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV-- 129
Query: 356 LLLASKCDLPDRQVEINEIEA--VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
L+ +K DLPD++ E+NE +A + +Y+ + + E S+ +E ++ L+D I+ KR
Sbjct: 130 -LIGNKADLPDQR-EVNERQARDLAEKYS-IPYFETSAATGQNVEKAVETLLDLIM--KR 184
Query: 414 MEEEAVERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
ME+ VE K+ I +T+ KL C C
Sbjct: 185 MEQ-CVE-KTHI---PDTVNGSSSGKLDGEKSAEKKCAC 218
Score = 111 (44.1 bits), Expect = 0.00073, P = 0.00073
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 104 DAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG 156
D + ++K+L +GDS VGKT+++ + NKF + TVG+DF K +++ G
Sbjct: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQG 57
>UNIPROTKB|G3X7D3 [details] [associations]
symbol:RAB39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 KO:K07924 OMA:VEDGWDG
CTD:270160 EMBL:DAAA02040188 EMBL:DAAA02040189 EMBL:DAAA02040190
RefSeq:NP_001179759.1 UniGene:Bt.89064 Ensembl:ENSBTAT00000024288
GeneID:541114 KEGG:bta:541114 NextBio:20879016 Uniprot:G3X7D3
Length = 217
Score = 265 (98.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 67/177 (37%), Positives = 101/177 (57%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKF--LDN--YKNTVGVDFSTKLLSHKKYG 288
+ I I + +++ GDSTVGK+ + F Q +F L + TVGVDF ++LL +
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEP-- 58
Query: 289 GRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD 348
G+ +KLQ+WD AGQ+R+ ++R YY+NS G ++FD+TNR+SFE V W L+ +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDW---LEEAKMHV 115
Query: 349 NGAMLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
+ LL+ KCDL RQV E E + M +IE S+K+ +E+S L
Sbjct: 116 QPFQIVFLLVGHKCDLASQRQVTREEAEKLSADCG-MKYIETSAKDATNVEESFTIL 171
>UNIPROTKB|Q96AH8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0005770
"late endosome" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0034499 "late endosome to Golgi transport"
evidence=IMP] [GO:0034164 "negative regulation of toll-like
receptor 9 signaling pathway" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0032755 GO:GO:0005764 GO:GO:0005770 GO:GO:0005802
GO:GO:0051092 GO:GO:0045654 PROSITE:PS51419 HOVERGEN:HBG009351
GO:GO:0034499 GO:GO:0034144 CTD:338382 KO:K07898 GO:GO:0034164
EMBL:AY094596 EMBL:BC017092 IPI:IPI00059444 RefSeq:NP_001157994.1
RefSeq:NP_796377.3 UniGene:Hs.534612 ProteinModelPortal:Q96AH8
SMR:Q96AH8 IntAct:Q96AH8 PhosphoSite:Q96AH8 DMDM:50401122
PRIDE:Q96AH8 GeneID:338382 KEGG:hsa:338382 GeneCards:GC01U901021
HGNC:HGNC:30513 neXtProt:NX_Q96AH8 PharmGKB:PA134940117
GenomeRNAi:338382 NextBio:96961 CleanEx:HS_RAB7B
Genevestigator:Q96AH8 Uniprot:Q96AH8
Length = 199
Score = 265 (98.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/193 (32%), Positives = 105/193 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F + Y+ T+G +K++ G +KLQIWD GQ
Sbjct: 11 LIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIII---LGDTTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGCI+ FD+T+ +SFE++ W+ D+ +K I+ P +LL +K
Sbjct: 68 ERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAK-IVPMEQSYPMVLLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR--MEEEAVE 420
DL DR+V + C + + + + EVS+K + + + L R + + +E E
Sbjct: 127 DLADRKVPQEVAQGWCREKD-IPYFEVSAKNDINVVQAFEMLASRALSRYQSILENHLTE 185
Query: 421 RKSSIRLSEETLR 433
SI+LS + R
Sbjct: 186 ---SIKLSPDQSR 195
>UNIPROTKB|J9P6H6 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:AAEX03014730 EMBL:AAEX03014731 EMBL:AAEX03014732
RefSeq:XP_854240.3 Ensembl:ENSCAFT00000049240 GeneID:611477
KEGG:cfa:611477 Uniprot:J9P6H6
Length = 201
Score = 264 (98.0 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 59/197 (29%), Positives = 114/197 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS V K+S + F N F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVVKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS V K+S + F N F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVVKSSLLLRFADNTFSGSYITTIGVDFKIRTV---EINGEKVKLQIWD 63
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 264 (98.0 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 58/186 (31%), Positives = 110/186 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F +++ +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+TN +SFE++ W +++ D M+ + +
Sbjct: 66 GQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMI----IGN 121
Query: 361 KCDLPDR-QVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ +R +V + E + +Y ++E S+K +L I+++ F + R I SK ME+ +
Sbjct: 122 KCDIEERREVSRDRGEQLAIEYG-TKFLETSAKANLNIDEAF-FTLARDIKSK-MEQNEM 178
Query: 420 ERKSSI 425
S+
Sbjct: 179 RAGGSV 184
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F + F +++ +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 264 (98.0 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 58/186 (31%), Positives = 110/186 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F +++ +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+TN +SFE++ W +++ D M+ + +
Sbjct: 66 GQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMI----IGN 121
Query: 361 KCDLPDR-QVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ +R +V + E + +Y ++E S+K +L I+++ F + R I SK ME+ +
Sbjct: 122 KCDIEERREVSRDRGEQLAIEYG-TKFLETSAKANLNIDEAF-FTLARDIKSK-MEQNEM 178
Query: 420 ERKSSI 425
S+
Sbjct: 179 RAGGSV 184
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F + F +++ +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|F1SV21 [details] [associations]
symbol:RAB39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 KO:K07924 OMA:VEDGWDG
EMBL:FP016189 RefSeq:XP_003129872.1 UniGene:Ssc.77330
Ensembl:ENSSSCT00000022868 GeneID:100525827 KEGG:ssc:100525827
Uniprot:F1SV21
Length = 217
Score = 264 (98.0 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 67/177 (37%), Positives = 103/177 (58%)
Query: 233 LSPIQIPTYPILITGDSTVGKTSYVQGFVQNKF--LDN--YKNTVGVDFSTKLLSHKKYG 288
+ I I + +++ GDSTVGK+ + F Q +F L + TVGVDF ++LL +
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEP-- 58
Query: 289 GRPVKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILD 348
G+ +KLQ+WD AGQ+R+ ++R YY+NS G ++FD+TNR+SFE V W + +K +
Sbjct: 59 GKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEE--AKMHVQ 116
Query: 349 NGAMLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFL 404
++ LL+ KCDL RQV E E + M +IE S+K+ +E+S L
Sbjct: 117 PFRIV-FLLVGHKCDLASQRQVTREEAERLSADCG-MKYIETSAKDATNVEESFTIL 171
>TAIR|locus:2079631 [details] [associations]
symbol:RABA5b "RAB GTPase homolog A5B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC009853 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY072444 EMBL:BT002173
IPI:IPI00541946 RefSeq:NP_187397.1 UniGene:At.43319
UniGene:At.48630 ProteinModelPortal:Q9SRS5 SMR:Q9SRS5 IntAct:Q9SRS5
PaxDb:Q9SRS5 PRIDE:Q9SRS5 EnsemblPlants:AT3G07410.1 GeneID:819929
KEGG:ath:AT3G07410 TAIR:At3g07410 InParanoid:Q9SRS5 OMA:EEGLFFM
PhylomeDB:Q9SRS5 ProtClustDB:CLSN2683060 Genevestigator:Q9SRS5
Uniprot:Q9SRS5
Length = 217
Score = 263 (97.6 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 60/193 (31%), Positives = 113/193 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGK++ + F +++F N K T+GV+F T+L+ + G+ VK QIWD A
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIE---GKEVKAQIWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G +I++D+T +FESV +W +L++ C D +L+ +
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHC--DTAVAQ--MLVGN 125
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI---ICSKRMEE 416
KCDL D R V + E +A+ + ++E S+ + ++ + ++ I + K +
Sbjct: 126 KCDLEDIRAVSVEEGKALAEEEGLF-FMETSALDATNVDKAFEIVIREIFNNVSRKLLNS 184
Query: 417 EAVERKSSI-RLS 428
+A + + S+ R+S
Sbjct: 185 DAYKAELSVNRVS 197
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGK++ + F +++F N K T+GV+F T+L+ + G+ VK QIWD
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIE---GKEVKAQIWD 67
>WB|WBGene00004273 [details] [associations]
symbol:rab-10 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0006412
"translation" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0001881 "receptor recycling" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005797 "Golgi medial cisterna"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0031045
"dense core granule" evidence=IDA] [GO:0030424 "axon" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0007264 GO:GO:0002119
GO:GO:0032940 GO:GO:0006412 GO:GO:0015031 GO:GO:0030424
GO:GO:0043025 GO:GO:0040018 GO:GO:0055037 GO:GO:0040035
GO:GO:0005769 GO:GO:0001881 GO:GO:0032456 GO:GO:0040002
GO:GO:0043652 GO:GO:0005797 GO:GO:0031045 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104031
EMBL:FO081319 PIR:T28971 RefSeq:NP_491857.1
ProteinModelPortal:Q94148 SMR:Q94148 STRING:Q94148
EnsemblMetazoa:T23H2.5.1 EnsemblMetazoa:T23H2.5.2
EnsemblMetazoa:T23H2.5.3 GeneID:266836 KEGG:cel:CELE_T23H2.5
UCSC:T23H2.5.1 CTD:266836 WormBase:T23H2.5 InParanoid:Q94148
OMA:HETSAKL NextBio:953212 ArrayExpress:Q94148 Uniprot:Q94148
Length = 201
Score = 263 (97.6 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 61/199 (30%), Positives = 112/199 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + K G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ +W ++D D M+ L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMI----LGN 122
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
KCD+ DR+V E Q + +S+ E S+K ++ ++ + L + I+ +M + E
Sbjct: 123 KCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILA--KMPDSTDE 180
Query: 421 RKSSIRLSEETLRDDQPKK 439
+ S +T+ QP++
Sbjct: 181 Q------SRDTVNPVQPQR 193
Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F + F + +T+G+DF K + K G+ +KLQIWD
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK---GKKIKLQIWD 64
>UNIPROTKB|Q95UJ0 [details] [associations]
symbol:Rab7a "Ras-related protein Rab-7a" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0090383
"phagosome acidification" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0030670 GO:GO:0015031 PROSITE:PS51419 GO:GO:0090383
EMBL:AY050242 EMBL:AY744503 EMBL:FJ358492 HSSP:P32939
ProteinModelPortal:Q95UJ0 SMR:Q95UJ0 Uniprot:Q95UJ0
Length = 206
Score = 261 (96.9 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 57/178 (32%), Positives = 100/178 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I+I GDS VGKTS + +V +F Y+ TVG DF K + R V LQIWD A
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVM---IDDRMVTLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ + +Y+ +D C++++D+TN KSF+S+ W+ + + + P ++L +
Sbjct: 66 GQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVLGN 125
Query: 361 KCD-LPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
K D +R+V+ ++ + C + + + EVS+K+ IE + + + S+ +EE
Sbjct: 126 KLDKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIA-KAAASQEKDEE 182
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I+I GDS VGKTS + +V +F Y+ TVG DF K + R V LQIWD
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVM---IDDRMVTLQIWD 63
>UNIPROTKB|I3LRC7 [details] [associations]
symbol:LOC100627693 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034164 "negative regulation of toll-like receptor
9 signaling pathway" evidence=IEA] [GO:0034144 "negative regulation
of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005764 GO:GO:0005770 GO:GO:0034144
GeneTree:ENSGT00700000104345 KO:K07898 OMA:LHQYVHK GO:GO:0034164
EMBL:FP565475 RefSeq:XP_003357460.1 Ensembl:ENSSSCT00000030753
GeneID:100627693 KEGG:ssc:100627693 Uniprot:I3LRC7
Length = 200
Score = 261 (96.9 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 62/188 (32%), Positives = 103/188 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F ++Y+ T+G +K++ +KLQIWD GQ
Sbjct: 11 LIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIII---LDDTTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGCI+ FD+T+ +SFE++ W+ D+ +K I + P ++L +K
Sbjct: 68 ERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPMEQSY-PMVVLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
DL DRQV + C + + + + EVS+K + + + L R + R E+
Sbjct: 127 DLADRQVPQEVAQGWCKEKD-IPYFEVSAKNDINVVQAFEMLAGRALSRYRSILESYFT- 184
Query: 423 SSIRLSEE 430
SI+LS E
Sbjct: 185 DSIKLSPE 192
>UNIPROTKB|O97572 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9986
"Oryctolagus cuniculus" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 OrthoDB:EOG4QFWF4
EMBL:AF050174 RefSeq:NP_001075503.1 UniGene:Ocu.2322
ProteinModelPortal:O97572 SMR:O97572 PRIDE:O97572 GeneID:100008682
Uniprot:O97572
Length = 207
Score = 260 (96.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ +S +Y+ +D C+++FD+T +F+++ W+ + + + P ++L +K
Sbjct: 68 ERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKI 127
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL +RQV +A + N + + E S+KE + +E +
Sbjct: 128 DLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQA 165
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S + +LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + R V +QIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM---VDDRLVTMQIWD 63
>POMBASE|SPBC405.04c [details] [associations]
symbol:ypt7 "GTPase Ypt7" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IC] [GO:0005634
"nucleus" evidence=IDA] [GO:0005773 "vacuole" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISS] [GO:0007035 "vacuolar acidification"
evidence=IGI] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IMP] [GO:0031321 "ascospore-type prospore assembly"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0051469 "vesicle fusion with vacuole"
evidence=IMP] [GO:0061191 "positive regulation of vacuole fusion,
non-autophagic" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPBC405.04c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005634 GO:GO:0005773 GO:GO:0006886 GO:GO:0007264
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR GO:GO:0030100
PROSITE:PS51419 GO:GO:0006896 eggNOG:COG1100 GO:GO:0045324
GO:GO:0007035 GO:GO:0042144 GO:GO:0031321 GO:GO:0051469
HOGENOM:HOG000233968 KO:K07897 OMA:SPRDPEH PIR:T40425
RefSeq:NP_596307.1 ProteinModelPortal:O94655 SMR:O94655
STRING:O94655 PRIDE:O94655 EnsemblFungi:SPBC405.04c.1
GeneID:2540763 KEGG:spo:SPBC405.04c OrthoDB:EOG48WGB7
NextBio:20801882 GO:GO:0061191 Uniprot:O94655
Length = 205
Score = 260 (96.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 58/192 (30%), Positives = 104/192 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK-LLSHKKYGGRPVKLQIWDIAG 301
++I G+S VGKTS + +V KF +YK T+G DF TK +L K V LQ+WD AG
Sbjct: 11 VIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKV----VTLQLWDTAG 66
Query: 302 QDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASK 361
Q+R+ + +Y+ +D C++++D+ N KSFE++ W+ + + N P +LL +K
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 362 CDLPD--RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
D+ + R V ++ A C + + E S+KE + ++++ + + + ++ A
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAA 186
Query: 420 ERKSSIRLSEET 431
+ I L E+
Sbjct: 187 DFTDPIHLDMES 198
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 108 VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
+LK++++G+S VGKTS + +V KF +YK T+G DF TK
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTK 48
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK-LLSHKKYGGRPVKLQIWD 228
++I G+S VGKTS + +V KF +YK T+G DF TK +L K V LQ+WD
Sbjct: 11 VIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKV----VTLQLWD 63
>UNIPROTKB|Q6DUB4 [details] [associations]
symbol:Rab7b "Ras-related protein Rab-7b" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005874 "microtubule" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0031912 "oral apparatus"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 GO:GO:0005874 EMBL:AY644723 EMBL:AY875981
ProteinModelPortal:Q6DUB4 SMR:Q6DUB4 GO:GO:0031912 Uniprot:Q6DUB4
Length = 206
Score = 260 (96.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 57/178 (32%), Positives = 100/178 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I+I GDS VGKTS + +V +F Y+ TVG DF K + R V LQIWD A
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVM---IDDRMVTLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ + +Y+ +D C++++D+TN KSF+S+ W+ + + + P ++L +
Sbjct: 66 GQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVLGN 125
Query: 361 KCD-LPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
K D +R+V+ ++ + C + + + EVS+K+ IE + + + S+ +EE
Sbjct: 126 KLDKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIA-KAAASQEKDEE 182
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I+I GDS VGKTS + +V +F Y+ TVG DF K + R V LQIWD
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVM---IDDRMVTLQIWD 63
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 260 (96.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 55/171 (32%), Positives = 102/171 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIE---GKRIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ RQV+ + E + ++ + + E S+K + ++++ + L I+
Sbjct: 121 NKCDMEAKRQVQREQAEKLAREHR-IRFFETSAKSSVNVDEAFSSLARDIL 170
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIE---GKRIKLQVWD 63
>MGI|MGI:1931295 [details] [associations]
symbol:Rab27b "RAB27b, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=ISO] [GO:0017157
"regulation of exocytosis" evidence=ISO] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=ISO] [GO:0030667 "secretory granule membrane"
evidence=ISO] [GO:0032585 "multivesicular body membrane"
evidence=ISO] [GO:0042589 "zymogen granule membrane" evidence=ISO]
[GO:0045921 "positive regulation of exocytosis" evidence=ISO]
[GO:0071985 "multivesicular body sorting pathway" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1931295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 PDB:2ZET PDBsum:2ZET HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF328893 EMBL:AY010898 EMBL:BC032928
IPI:IPI00120346 RefSeq:NP_001076022.1 RefSeq:NP_085031.3
UniGene:Mm.246753 PDB:2IEY PDB:2IEZ PDB:2IF0 PDBsum:2IEY
PDBsum:2IEZ PDBsum:2IF0 ProteinModelPortal:Q99P58 SMR:Q99P58
DIP:DIP-46237N STRING:Q99P58 PhosphoSite:Q99P58 PaxDb:Q99P58
PRIDE:Q99P58 Ensembl:ENSMUST00000069749 Ensembl:ENSMUST00000117692
Ensembl:ENSMUST00000121693 GeneID:80718 KEGG:mmu:80718
InParanoid:Q99P58 ChiTaRS:RAB27B EvolutionaryTrace:Q99P58
NextBio:350069 Bgee:Q99P58 CleanEx:MM_RAB27B Genevestigator:Q99P58
GermOnline:ENSMUSG00000024511 Uniprot:Q99P58
Length = 218
Score = 260 (96.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 64/188 (34%), Positives = 111/188 (59%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG-----GRPVK--LQ 295
+L GDS VGKT+++ + NKF + TVG+DF K + + G G+ K LQ
Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQ 71
Query: 296 IWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPC 355
+WD AGQ+R+ ++ +++++ G ++MFDLT+++SF +V W L + +N ++
Sbjct: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV-- 129
Query: 356 LLLASKCDLPDRQVEINEIEA--VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
L+ +K DLPD++ E+NE +A + +Y + + E S+ +E S+ L+D I+ KR
Sbjct: 130 -LIGNKADLPDQR-EVNERQARELAEKYG-IPYFETSAATGQNVEKSVETLLDLIM--KR 184
Query: 414 MEEEAVER 421
ME+ VE+
Sbjct: 185 MEK-CVEK 191
>DICTYBASE|DDB_G0271736 [details] [associations]
symbol:rabC "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0271736
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000006
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 EMBL:L21013
RefSeq:XP_645455.1 ProteinModelPortal:P34143 PRIDE:P34143
EnsemblProtists:DDB0185061 GeneID:8618083 KEGG:ddi:DDB_G0271736
OMA:PPSQQNC Uniprot:P34143
Length = 196
Score = 259 (96.2 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 59/191 (30%), Positives = 111/191 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y I++ G+S VGK+S + F N F ++ T+GVDF+ K + +K+ G + VKLQ+WD A
Sbjct: 7 YKIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETG-QTVKLQLWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ +Y+ S G I+++D+T+ KSFE W D++ +G ++ +L+ +
Sbjct: 66 GQERFKSITQTFYRGSHGVIVVYDVTDPKSFERCKNWVEDINQ--YTQDGMII--ILVGN 121
Query: 361 KCDL-PDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D+ R+V + + + Q ++EVS+KE+ + + LV I + + + A
Sbjct: 122 KSDMVAQRKVTFEQGQEMAEQLK-TKFLEVSAKENNGVTQVFDLLVQDIEATMKNSKVA- 179
Query: 420 ERKSSIRLSEE 430
++ + L+ E
Sbjct: 180 --QNQLNLNSE 188
Score = 128 (50.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
Y I++ G+S VGK+S + F N F ++ T+GVDF+ K + +K+ G + VKLQ+WD
Sbjct: 7 YKIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETG-QTVKLQLWD 63
>UNIPROTKB|E2R5L5 [details] [associations]
symbol:RAB27B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0032585 "multivesicular body membrane"
evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005795 GO:GO:0032585
GO:GO:0030140 GO:GO:0045921 GO:GO:0071985
GeneTree:ENSGT00700000104288 CTD:5874 KO:K07886 OMA:QNVEKSV
EMBL:AAEX03000143 RefSeq:XP_541092.2 ProteinModelPortal:E2R5L5
Ensembl:ENSCAFT00000000237 GeneID:483974 KEGG:cfa:483974
NextBio:20858255 Uniprot:E2R5L5
Length = 218
Score = 259 (96.2 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 69/219 (31%), Positives = 120/219 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG-----GRPVK--LQ 295
+L GDS VGKT+++ + NKF + TVG+DF K + + G G+ K LQ
Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNTQGPNGSSGKAFKVHLQ 71
Query: 296 IWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPC 355
+WD AGQ+R+ ++ +++++ G ++MFDLT+++SF +V W L + +N ++
Sbjct: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV-- 129
Query: 356 LLLASKCDLPDRQVEINEIEA--VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
L+ +K DLPD++ E+NE +A + +Y + + E S+ +E ++ L+D I+ KR
Sbjct: 130 -LIGNKADLPDQR-EVNERQARDLADKYG-IPYFETSAATGQNVEKAVETLLDLIM--KR 184
Query: 414 MEEEAVERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
ME+ VE K+ + +T+ KL C C
Sbjct: 185 MEQ-CVE-KTQV---PDTVNGGDSGKLDGEKPAEKKCGC 218
>UNIPROTKB|J9P9M0 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 GO:GO:0007264 GeneTree:ENSGT00700000104228
EMBL:AAEX03000248 Ensembl:ENSCAFT00000048400 OMA:CDIENQL
Uniprot:J9P9M0
Length = 167
Score = 259 (96.2 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 48/142 (33%), Positives = 87/142 (61%)
Query: 292 VKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGA 351
+ + + I GQ+R+ M+RVYY+ + G ++FD++ +FE+V++WK DLDSK L NG+
Sbjct: 17 ISVVYFQILGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGS 76
Query: 352 MLPCLLLASKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIIC 410
+P +LLA+KCD D +++ C ++ F W E S+K+++ I+++ FLV+ I+
Sbjct: 77 PIPAVLLANKCDQKKDGGQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILA 136
Query: 411 SKRMEEEAVERKSSIRLSEETL 432
+ + ++L +ETL
Sbjct: 137 NHQSFPNEENDAGKVKLDQETL 158
>WB|WBGene00004271 [details] [associations]
symbol:rab-7 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0001555 "oocyte growth" evidence=IMP] [GO:0031090
"organelle membrane" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0090387 "phagolysosome
assembly involved in apoptotic cell clearance" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0007264
GO:GO:0030670 GO:GO:0002119 GO:GO:0015031 GO:GO:0008219
GO:GO:0018996 GO:GO:0003924 GO:GO:0010171 GO:GO:0040011
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0019915
GO:GO:0043652 eggNOG:COG1100 GO:GO:0001555 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH HSSP:P32939
EMBL:Z66516 GO:GO:0090387 PIR:T26119 RefSeq:NP_496549.1
ProteinModelPortal:Q23146 SMR:Q23146 IntAct:Q23146 STRING:Q23146
PaxDb:Q23146 EnsemblMetazoa:W03C9.3.1 EnsemblMetazoa:W03C9.3.2
EnsemblMetazoa:W03C9.3.3 GeneID:174834 KEGG:cel:CELE_W03C9.3
UCSC:W03C9.3.1 CTD:174834 WormBase:W03C9.3 InParanoid:Q23146
NextBio:885704 Uniprot:Q23146
Length = 209
Score = 258 (95.9 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 61/188 (32%), Positives = 100/188 (53%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V +F + YK T+G DF T+ ++ R V LQIWD AGQ
Sbjct: 12 VIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVN---IDDRTVTLQIWDTAGQ 68
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++ FD+TN SF+S+ W+ + + + P +LL +K
Sbjct: 69 ERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKV 128
Query: 363 DLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRME-EEAVE 420
DL R V ++ C + + EVS+KE L +E + + + + E + E
Sbjct: 129 DLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQETNDFPE 188
Query: 421 RKSSIRLS 428
IRL+
Sbjct: 189 FPDQIRLN 196
Score = 118 (46.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V +F + YK T+G DF T+ ++ R V LQIWD
Sbjct: 12 VIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVN---IDDRTVTLQIWD 64
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 106 ETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
+ +LK++++GDS VGKTS + +V +F + YK T+G DF T+
Sbjct: 7 KALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTR 49
>UNIPROTKB|F1P3T7 [details] [associations]
symbol:LOC428212 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 EMBL:AADN02043979 IPI:IPI00597051
ProteinModelPortal:F1P3T7 Ensembl:ENSGALT00000001470 OMA:SAKCNSN
Uniprot:F1P3T7
Length = 214
Score = 258 (95.9 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 61/169 (36%), Positives = 95/169 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDSTVGK+S ++ + + FLD TVGVDF + + + G VKLQ WD A
Sbjct: 12 FRVIMLGDSTVGKSSLLRRYTEGVFLDAVNQTVGVDFYVQFVELEP--GLQVKLQFWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++R YY+NS G +++FDLTNR SFESV +W ++ + LL+
Sbjct: 70 GQERFRAVTRSYYRNSAGAMLLFDLTNRASFESVRRWHREVTDTV---QPFHVVFLLVGH 126
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI 408
K DL +R+V E E + ++E S+K+ +E + L I
Sbjct: 127 KSDLAAERKVGRREAERLAASLG-ARYVETSAKDGSDVERAFRMLTAAI 174
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDSTVGK+S ++ + + FLD TVGVDF + + + G VKLQ WD
Sbjct: 12 FRVIMLGDSTVGKSSLLRRYTEGVFLDAVNQTVGVDFYVQFVELEP--GLQVKLQFWD 67
>UNIPROTKB|O00194 [details] [associations]
symbol:RAB27B "Ras-related protein Rab-27B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0042589 "zymogen granule membrane" evidence=IEA] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0045921 "positive regulation of
exocytosis" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA]
[GO:0032585 "multivesicular body membrane" evidence=IDA]
[GO:0071985 "multivesicular body sorting pathway" evidence=IMP]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016324 GO:GO:0003924 GO:GO:0005795 GO:GO:0032585
PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100 GO:GO:0019003
EMBL:CH471096 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 HOGENOM:HOG000233968 OrthoDB:EOG4PRSRM CTD:5874
KO:K07886 OMA:QNVEKSV EMBL:U57093 EMBL:AF329499 EMBL:AF498954
EMBL:AK314115 EMBL:BC027474 IPI:IPI00010491 RefSeq:NP_004154.2
UniGene:Hs.25318 PDB:2F7S PDBsum:2F7S ProteinModelPortal:O00194
SMR:O00194 DIP:DIP-48948N STRING:O00194 PhosphoSite:O00194
OGP:O00194 PaxDb:O00194 PRIDE:O00194 DNASU:5874
Ensembl:ENST00000262094 GeneID:5874 KEGG:hsa:5874 UCSC:uc002lfr.3
GeneCards:GC18P052495 HGNC:HGNC:9767 HPA:CAB017712 HPA:HPA019849
MIM:603869 neXtProt:NX_O00194 PharmGKB:PA34118 InParanoid:O00194
PhylomeDB:O00194 EvolutionaryTrace:O00194 GenomeRNAi:5874
NextBio:22822 Bgee:O00194 CleanEx:HS_RAB27B Genevestigator:O00194
GermOnline:ENSG00000041353 Uniprot:O00194
Length = 218
Score = 258 (95.9 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 63/188 (33%), Positives = 111/188 (59%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG-----GRPVK--LQ 295
+L GDS VGKT+++ + NKF + TVG+DF K + + G G+ K LQ
Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71
Query: 296 IWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPC 355
+WD AGQ+R+ ++ +++++ G ++MFDLT+++SF +V W L + +N ++
Sbjct: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV-- 129
Query: 356 LLLASKCDLPDRQVEINEIEA--VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
L+ +K DLPD++ E+NE +A + +Y + + E S+ +E ++ L+D I+ KR
Sbjct: 130 -LIGNKADLPDQR-EVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIM--KR 184
Query: 414 MEEEAVER 421
ME+ VE+
Sbjct: 185 MEQ-CVEK 191
>MGI|MGI:2442295 [details] [associations]
symbol:5430435G22Rik "RIKEN cDNA 5430435G22 gene"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IMP] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 EMBL:CH466520 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164 EMBL:AB232641
EMBL:AK030688 EMBL:AK036056 EMBL:AK079999 IPI:IPI00124400
IPI:IPI00453505 RefSeq:NP_663484.1 UniGene:Mm.44508
ProteinModelPortal:Q8VEA8 SMR:Q8VEA8 STRING:Q8VEA8
PhosphoSite:Q8VEA8 PRIDE:Q8VEA8 Ensembl:ENSMUST00000064664
Ensembl:ENSMUST00000064679 GeneID:226421 KEGG:mmu:226421
UCSC:uc007cnp.1 UCSC:uc007cnq.1 InParanoid:Q0PD09 NextBio:378152
Bgee:Q8VEA8 CleanEx:MM_5430435G22RIK Genevestigator:Q8VEA8
GermOnline:ENSMUSG00000052688 Uniprot:Q8VEA8
Length = 199
Score = 258 (95.9 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 55/167 (32%), Positives = 93/167 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F + Y+ T+G +K++ +KLQIWD GQ
Sbjct: 11 LIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIII---LDDTTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGCI+ FD+T+ +SFE++ W+ D+ +K I+ P ++L +K
Sbjct: 68 ERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAK-IIPMEQSYPMVVLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
DL DR+V + C + + M + EVS+K + + + L R +
Sbjct: 127 DLEDRKVSQEVVHGWCKEKD-MPYFEVSAKNDINVVQAFEVLASRAL 172
>UNIPROTKB|P51152 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0044257 "cellular protein catabolic
process" evidence=ISS] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 GO:GO:0008333 PROSITE:PS51419
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 GO:GO:0044257
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22818 PIR:S40207
UniGene:Cfa.44760 ProteinModelPortal:P51152 SMR:P51152 PRIDE:P51152
InParanoid:P51152 OrthoDB:EOG45757M Uniprot:P51152
Length = 208
Score = 257 (95.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 61/201 (30%), Positives = 112/201 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD AGQ
Sbjct: 9 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWDTAGQ 65
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+++ G I+++D+T +++F+ + +W +D D A L LL+ +K
Sbjct: 66 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASED--AEL--LLVGNKL 121
Query: 363 DLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
D DR++ + E H+ M + E S+K++ +++ LVD I+ K+M + +
Sbjct: 122 DCETDREITRQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDIL--KKMPLDILRN 179
Query: 422 KSSIRLSEETLRDDQPKKLVP 442
+ S + + P +L P
Sbjct: 180 ELSNSILSLQPEPEIPPELPP 200
Score = 113 (44.8 bits), Expect = 0.00036, P = 0.00036
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD
Sbjct: 9 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWD 61
>UNIPROTKB|E2RHH4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:AAEX03012413
Ensembl:ENSCAFT00000037393 Uniprot:E2RHH4
Length = 228
Score = 257 (95.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 65/194 (33%), Positives = 108/194 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL-SHKKYGGRPVKLQIWDI 299
+ +L+ G+S+VGKTS++ + + F + +TVG+DF K + H K +KLQIWD
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR----IKLQIWDT 78
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+RY ++ YY+ + G ++M+D+ N++SF +V W + + DN ++ L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYS-WDNAQVI---LVG 134
Query: 360 SKCDLPDRQVEINEI------EAVCHQ---YNFMSWIEVSSKEHLMIEDSMNFLVDRIIC 410
+KCDL D +V E E C + + + E S+KE++ ++ LVD IIC
Sbjct: 135 NKCDLEDERVVPTEDGRRLKKELGCFEAEPHTGFEFFEASAKENINVKQVFERLVD-IIC 193
Query: 411 SKRMEEEAVERKSS 424
K E++E SS
Sbjct: 194 EKM--NESLEPSSS 205
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 58/192 (30%), Positives = 106/192 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F Y +T+G+DF K + + G+ VKLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVE---GKKVKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KS+E++ W K I +N A + +LL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWM-----KSIKENASAGVSRMLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+KCD+ R+V E + ++ + + E S+K + +E+S L I+ +
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKEHG-IRFFETSAKSSINVEESFTSLARDILLKSNKKPGP 179
Query: 419 VERKSSIRLSEE 430
R+ + +E+
Sbjct: 180 SGREVKLTSTEK 191
Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI- 229
+ +L+ GDS VGKT + F ++ F Y +T+G+DF K + + G+ VKLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVE---GKKVKLQVWDTA 65
Query: 230 ----YCTLSPIQIP-TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSH 284
+ T++ I++ D T K SY +QN ++ + K S LL +
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEK-SYEN--IQN-WMKSIKENASAGVSRMLLGN 121
Query: 285 K 285
K
Sbjct: 122 K 122
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 53/171 (30%), Positives = 103/171 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + + + ++ + + E S+K + ++++ + L I+
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWD 63
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 53/171 (30%), Positives = 103/171 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + + + ++ + + E S+K + ++++ + L I+
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWD 63
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 53/171 (30%), Positives = 103/171 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 48 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWDTA 104
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 105 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 159
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + + + ++ + + E S+K + ++++ + L I+
Sbjct: 160 NKCDMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 209
Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 48 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE---GKKIKLQVWD 102
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 54/171 (31%), Positives = 102/171 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIE---GKRIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + E + ++ + + E S+K + ++++ + L I+
Sbjct: 121 NKCDMEAKRKVQREQAERLAREHR-IRFFETSAKSSVNVDEAFSSLARDIL 170
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIE---GKRIKLQVWD 63
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 62/201 (30%), Positives = 112/201 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD AGQ
Sbjct: 38 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWDTAGQ 94
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+ + G ++++D+T +++FE + +W +D D A L LL+ +K
Sbjct: 95 ERFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASED--AEL--LLVGNKL 150
Query: 363 DLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
D DR + + E + + M + E S+K++ +++ LVD I+ +E + E
Sbjct: 151 DCESDRAISRQQAERFASRISGMRFCEASAKDNFNVDEIFLKLVDDILSKMPLEVPSKEL 210
Query: 422 KSSIRLSEETLRDDQPKKLVP 442
+S+ LS + + P +L P
Sbjct: 211 SNSV-LSLQP-EPEIPPELPP 229
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD
Sbjct: 38 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWD 90
>UNIPROTKB|F1N2J9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0005778 GO:GO:0045046 GeneTree:ENSGT00700000104031
OMA:TSFFRCL IPI:IPI00693636 UniGene:Bt.38707 EMBL:DAAA02028749
PRIDE:F1N2J9 Ensembl:ENSBTAT00000014802 Uniprot:F1N2J9
Length = 207
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 55/173 (31%), Positives = 101/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K + +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSMNVEEAF-FTLARDIMTK 172
>UNIPROTKB|Q2HJI8 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
HSSP:P55258 EMBL:BC105330 IPI:IPI00693636 RefSeq:NP_001069785.1
UniGene:Bt.38707 ProteinModelPortal:Q2HJI8 SMR:Q2HJI8 PRIDE:Q2HJI8
GeneID:614242 KEGG:bta:614242 CTD:51762 InParanoid:Q2HJI8 KO:K07902
NextBio:20899012 Uniprot:Q2HJI8
Length = 207
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 55/173 (31%), Positives = 101/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K + +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLEASAKSSMNVEEAF-FTLARDIMTK 172
>UNIPROTKB|E2RLP0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 EMBL:AAEX03014730 EMBL:AAEX03014731
EMBL:AAEX03014732 Ensembl:ENSCAFT00000016115 Uniprot:E2RLP0
Length = 201
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 58/197 (29%), Positives = 113/197 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS V K+S + F N F + T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVVKSSLLLRFADNTFSASILTTIGVDFKIRTV---EINGEKVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+T+ +SF +V +W H+++ C D+ + L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRI---LVGN 120
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR---MEE 416
K D P+R+V E + Q + E S+KE++ +E+ N + + ++ +K+ ++
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 417 EAVERKSSIRLSEETLR 433
+ ++ ++L++ + R
Sbjct: 180 QQQQQNDVVKLTKNSKR 196
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 56/177 (31%), Positives = 105/177 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV---ELHGKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQVEI-NEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + ++ E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMEDKRVVLKSKGEQIAREHA-IRFFETSAKANINIEKAFLTLAEDILQKTPVKE 178
>SGD|S000001856 [details] [associations]
symbol:YPT1 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0048211
"Golgi vesicle docking" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0000149 "SNARE binding" evidence=IDA;IPI]
[GO:0035494 "SNARE complex disassembly" evidence=IMP] [GO:0005795
"Golgi stack" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0090114 "COPII-coated vesicle budding"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=IEA;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IGI;IMP]
[GO:0048194 "Golgi vesicle budding" evidence=IGI] [GO:0034498
"early endosome to Golgi transport" evidence=IMP] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0016236 "macroautophagy"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000001856 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0000139 GO:GO:0006461
GO:GO:0005789 GO:GO:0003924 GO:GO:0005795 EMBL:D50617 EMBL:BK006940
GO:GO:0005802 PROSITE:PS51419 GO:GO:0048194 GO:GO:0032456
GO:GO:0016236 eggNOG:COG1100 GO:GO:0006890 GO:GO:0032258
GO:GO:0000407 GO:GO:0034498 PDB:3CUE PDBsum:3CUE GO:GO:0000149
PDB:1UKV PDB:2BCG PDBsum:1UKV PDBsum:2BCG HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 KO:K07874 OMA:MIMASEI GO:GO:0090114
GO:GO:0035494 GO:GO:0048211 EMBL:X00209 OrthoDB:EOG49W5QK
EMBL:AY558467 PIR:S56216 RefSeq:NP_116615.1 PDB:1YZN PDBsum:1YZN
ProteinModelPortal:P01123 SMR:P01123 DIP:DIP-2019N IntAct:P01123
MINT:MINT-389361 STRING:P01123 PaxDb:P01123 PeptideAtlas:P01123
PRIDE:P01123 EnsemblFungi:YFL038C GeneID:850505 KEGG:sce:YFL038C
CYGD:YFL038c EvolutionaryTrace:P01123 NextBio:966209
Genevestigator:P01123 GermOnline:YFL038C Uniprot:P01123
Length = 206
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 60/197 (30%), Positives = 111/197 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ G+S VGK+ + F + + ++Y +T+GVDF K + + G+ VKLQIWD A
Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTV---ELDGKTVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ S G II++D+T+++SF V W ++D +L LL+ +
Sbjct: 66 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA---TSTVLK-LLVGN 121
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI---ICSKRMEE- 416
KCDL D++V ++ N M ++E S+ + +ED+ + +I + + + E
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNET 181
Query: 417 -EAVERKSSIRLSEETL 432
+ E K ++ L ++L
Sbjct: 182 TQKKEDKGNVNLKGQSL 198
>ZFIN|ZDB-GENE-050522-328 [details] [associations]
symbol:rab23 "RAB23, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-328 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:51715
HOVERGEN:HBG100144 KO:K06234 EMBL:BC095213 IPI:IPI00512473
RefSeq:NP_001018579.1 UniGene:Dr.39367 ProteinModelPortal:Q503R5
SMR:Q503R5 GeneID:553778 KEGG:dre:553778 InParanoid:Q503R5
NextBio:20880499 Uniprot:Q503R5
Length = 237
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 54/191 (28%), Positives = 106/191 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
+++ G+ VGK+S +Q + + F +YK T+GVDF + + G V+L +WD AGQ
Sbjct: 12 VVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQII---VNGEDVRLMLWDTAGQ 68
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+ + +++ YY+ + C+++F T+R+SFE++ WK ++ + + D +P +L+ +K
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKEKVEME-VGD----IPTVLVQNKI 123
Query: 363 DLPDRQVEINE-IEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
DL D V NE E + + + + S KE L + + +L D+ + +R+++++ E
Sbjct: 124 DLLDDTVIKNEEAEGLAKRLK-LRFYRTSVKEDLNVNEVFKYLADKYL--QRLKQQSAEE 180
Query: 422 KSSIRLSEETL 432
I S +
Sbjct: 181 TDIIHTSSNKI 191
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 255 (94.8 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/171 (30%), Positives = 103/171 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIE---GKKIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + + + ++ + + E S+K + ++++ + L I+
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIE---GKKIKLQVWD 63
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 255 (94.8 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/171 (31%), Positives = 102/171 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIE---GKRIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V + + + ++ + + E S+K + ++++ N L I+
Sbjct: 121 NKCDMEAKRKVLKEQADKLAREHG-IRFFETSAKSSMNVDEAFNSLARDIL 170
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIE---GKRIKLQVWD 63
>UNIPROTKB|E2RJS1 [details] [associations]
symbol:LOC488576 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0034144
"negative regulation of toll-like receptor 4 signaling pathway"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345 KO:K07898
OMA:LHQYVHK GO:GO:0034164 EMBL:AAEX03018265 RefSeq:XP_848668.1
ProteinModelPortal:E2RJS1 Ensembl:ENSCAFT00000016185 GeneID:488576
KEGG:cfa:488576 NextBio:20861902 Uniprot:E2RJS1
Length = 200
Score = 255 (94.8 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 61/188 (32%), Positives = 102/188 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F ++Y+ T+G +K++ +KLQIWD GQ
Sbjct: 11 LIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIII---LDDTTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGCI+ FD+T+ +SFE++ W+ D+ +K I + P ++L +K
Sbjct: 68 ERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEPSY-PMVVLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
DL DRQV + C + + + + EVS+K + + + L R + + E
Sbjct: 127 DLADRQVPQEVAQGWCKEKD-IPYFEVSAKNDINVVQAFEMLASRALSRYQSILENY-LT 184
Query: 423 SSIRLSEE 430
SI+LS E
Sbjct: 185 DSIKLSPE 192
>UNIPROTKB|Q17R06 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC118088
IPI:IPI00697565 RefSeq:NP_001068785.1 UniGene:Bt.34284
ProteinModelPortal:Q17R06 SMR:Q17R06 PRIDE:Q17R06 GeneID:507488
KEGG:bta:507488 CTD:23011 InParanoid:Q17R06 KO:K07890
OrthoDB:EOG4W0XF0 NextBio:20868087 Uniprot:Q17R06
Length = 222
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 72
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 73 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 128
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 129 NKVDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 187
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 188 KGNGSSQPGAARRGVQII-DDEPQ 210
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 167 QTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQI 226
+T S+ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L I
Sbjct: 13 RTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAI 69
Query: 227 WD 228
WD
Sbjct: 70 WD 71
>UNIPROTKB|Q9UL25 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 GO:GO:0032154 eggNOG:COG1100
GO:GO:0019003 BRENDA:3.6.5.2 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0
EMBL:AF091035 EMBL:BC021901 EMBL:BC092475 EMBL:D42087
IPI:IPI00007755 RefSeq:NP_055814.1 UniGene:Hs.524590 PDB:1YZT
PDB:1YZU PDB:1Z08 PDB:1Z0I PDB:2OT3 PDBsum:1YZT PDBsum:1YZU
PDBsum:1Z08 PDBsum:1Z0I PDBsum:2OT3 ProteinModelPortal:Q9UL25
SMR:Q9UL25 DIP:DIP-29349N IntAct:Q9UL25 MINT:MINT-3081967
STRING:Q9UL25 PhosphoSite:Q9UL25 DMDM:13633613 PaxDb:Q9UL25
PeptideAtlas:Q9UL25 PRIDE:Q9UL25 DNASU:23011
Ensembl:ENST00000261263 GeneID:23011 KEGG:hsa:23011 UCSC:uc001swt.3
GeneCards:GC12P072100 HGNC:HGNC:18263 HPA:HPA016988 MIM:612398
neXtProt:NX_Q9UL25 PharmGKB:PA34111 InParanoid:Q9UL25 OMA:SHFFASA
PhylomeDB:Q9UL25 ChiTaRS:RAB21 EvolutionaryTrace:Q9UL25
GenomeRNAi:23011 NextBio:43928 ArrayExpress:Q9UL25 Bgee:Q9UL25
CleanEx:HS_RAB21 Genevestigator:Q9UL25 GermOnline:ENSG00000080371
Uniprot:Q9UL25
Length = 225
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 75
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 76 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 131
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 132 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 190
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 191 KGNGSSQPGTARRGVQII-DDEPQ 213
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 156 GGRPYGTFSPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHK 215
GG G + + S+ +++ G+ VGKTS V + +NKF D + T+ F TK L+
Sbjct: 5 GGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN-- 62
Query: 216 KYGGRPVKLQIWD 228
GG+ V L IWD
Sbjct: 63 -IGGKRVNLAIWD 74
>MGI|MGI:894284 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030141 "secretory granule"
evidence=ISO] [GO:0044257 "cellular protein catabolic process"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:894284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 OrthoDB:EOG45757M CTD:201475
KO:K07907 ChiTaRS:RAB12 EMBL:AB232607 EMBL:M79303 EMBL:AK013690
IPI:IPI00169699 PIR:JH0643 RefSeq:NP_077768.2 UniGene:Mm.248313
ProteinModelPortal:P35283 SMR:P35283 IntAct:P35283 STRING:P35283
PhosphoSite:P35283 PaxDb:P35283 PRIDE:P35283 DNASU:19328
Ensembl:ENSMUST00000167962 GeneID:19328 KEGG:mmu:19328
GeneTree:ENSGT00700000104049 InParanoid:P35283 NextBio:296297
Bgee:P35283 CleanEx:MM_RAB12 Genevestigator:P35283
GermOnline:ENSMUSG00000023460 Uniprot:P35283
Length = 243
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 61/201 (30%), Positives = 111/201 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD AGQ
Sbjct: 44 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWDTAGQ 100
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+++ G I+++D+T +++F+ + +W +D D A L LL+ +K
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASED--AEL--LLVGNKL 156
Query: 363 DLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
D DR++ + E Q M + E S+K++ +++ LVD I+ K+M + +
Sbjct: 157 DCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL--KKMPLDVLRN 214
Query: 422 KSSIRLSEETLRDDQPKKLVP 442
+ S + + P +L P
Sbjct: 215 ELSNSILSLQPEPEIPPELPP 235
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD
Sbjct: 44 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWD 96
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 57/187 (30%), Positives = 110/187 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L DN ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DNNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ E
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAE 183
Query: 417 EAVERKS 423
+ +S
Sbjct: 184 RSAHDES 190
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>ZFIN|ZDB-GENE-070424-36 [details] [associations]
symbol:rab8a "RAB8A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=IGI;IMP] [GO:0032402 "melanosome transport" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070424-36 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0035845
GeneTree:ENSGT00700000104031 EMBL:CU693492 IPI:IPI00844893
ProteinModelPortal:F1QAX4 Ensembl:ENSDART00000086326 Uniprot:F1QAX4
Length = 210
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 59/202 (29%), Positives = 116/202 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD+ + RQV + E + +Y + ++E S+K ++ +E++ L R I +K +
Sbjct: 122 KCDINEKRQVSKDRGEKLALEYG-IKFMETSAKANINVENAFLTLA-RDIKAKMDTKLLT 179
Query: 420 ERKSSIRLSEETLR--DDQPKK 439
+ ++ + S ++ +QPKK
Sbjct: 180 QEGNNPQGSNHGVKITTEQPKK 201
Score = 110 (43.8 bits), Expect = 0.00083, P = 0.00083
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|F1PGI1 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00640000091439
EMBL:AAEX03007069 Ensembl:ENSCAFT00000000732 Uniprot:F1PGI1
Length = 238
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 32 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 88
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 89 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 144
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 145 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 203
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 204 KGNGSSQPGAARRGVQII-DDEPQ 226
>UNIPROTKB|P55745 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4W0XF0
ProteinModelPortal:P55745 SMR:P55745 PRIDE:P55745 Uniprot:P55745
Length = 223
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 73
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 129
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 130 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 188
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 189 KGNGSSQPGAARRGVQII-DDEPQ 211
>UNIPROTKB|F1SH25 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 KO:K07890 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:CU457452 RefSeq:XP_003481707.1
Ensembl:ENSSSCT00000000550 GeneID:100736618 KEGG:ssc:100736618
Uniprot:F1SH25
Length = 222
Score = 254 (94.5 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 72
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 73 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 128
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 129 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 187
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 188 KGNGSSQPGATRRGVQII-DDEPQ 210
>RGD|3527 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005525 "GTP binding" evidence=TAS] [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO;ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3527
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0030141 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 CTD:201475 KO:K07907 EMBL:M83676
IPI:IPI00876621 PIR:C42148 RefSeq:NP_037149.1 UniGene:Rn.11021
ProteinModelPortal:P35284 SMR:P35284 IntAct:P35284 STRING:P35284
PRIDE:P35284 GeneID:25530 KEGG:rno:25530 NextBio:607023
Genevestigator:P35284 Uniprot:P35284
Length = 243
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 61/201 (30%), Positives = 111/201 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD AGQ
Sbjct: 44 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWDTAGQ 100
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+++ G I+++D+T +++F+ + +W +D D A L LL+ +K
Sbjct: 101 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASED--AEL--LLVGNKL 156
Query: 363 DLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
D DR++ + E Q M + E S+K++ +++ LVD I+ K+M + +
Sbjct: 157 DCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL--KKMPLDVLRS 214
Query: 422 KSSIRLSEETLRDDQPKKLVP 442
+ S + + P +L P
Sbjct: 215 ELSNSILSLQPEPEIPPELPP 235
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD
Sbjct: 44 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWD 96
>UNIPROTKB|F1MPP1 [details] [associations]
symbol:LOC781001 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 IPI:IPI00697565
OMA:FQKVKSW GeneTree:ENSGT00640000091439 EMBL:DAAA02073306
Ensembl:ENSBTAT00000025807 Uniprot:F1MPP1
Length = 214
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 8 SFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 64
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 65 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 121 NKVDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 179
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 180 KGNGSSQPGAARRGVQII-DDEPQ 202
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 167 QTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQI 226
+T S+ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L I
Sbjct: 5 RTYSFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAI 61
Query: 227 WD 228
WD
Sbjct: 62 WD 63
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 59/188 (31%), Positives = 108/188 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +LI GDS VGK+S + F + F +Y T+GVDF + + + G VKLQIWD A
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIE---GMRVKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+++D+TN +SF +V +W ++ + C D ++ +L+ +
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC--D---VVKKVLVGN 120
Query: 361 KCDLPDRQVEINE-IEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D PDR+V I E + Q + + E S+K+++ +E+ + +++ K
Sbjct: 121 KNDDPDRKVVITEDAQRFAKQMD-IELFETSAKDNINVENMFLSITRQVLDHKLRTSPNE 179
Query: 420 ERKSSIRL 427
++K ++ L
Sbjct: 180 QQKDTLHL 187
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +LI GDS VGK+S + F + F +Y T+GVDF + + + G VKLQIWD
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIE---GMRVKLQIWD 63
>UNIPROTKB|E1C080 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:AADN02040439 EMBL:AADN02040440 EMBL:AADN02040441
IPI:IPI00585001 Ensembl:ENSGALT00000005515 Uniprot:E1C080
Length = 178
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 54/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ + RQV + E + Y + ++E S+K + +E++ F + R I +K
Sbjct: 122 KCDMNEKRQVSKEKGEKLAIDYG-IKFLETSAKSSINVEEAF-FTLARDIMTK 172
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|H0YNE9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B Ensembl:ENST00000559006 Bgee:H0YNE9
Uniprot:H0YNE9
Length = 188
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAF-FTLARDIMTK 172
Score = 109 (43.4 bits), Expect = 0.00072, P = 0.00071
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|F1NI30 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 IPI:IPI00593138 GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
Ensembl:ENSGALT00000026683 Uniprot:F1NI30
Length = 191
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 1 FKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 57
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 58 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERML----LGN 113
Query: 361 KCDLPDRQVEIN-EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 114 KCDMEDKRVVPKAKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 169
>UNIPROTKB|F1NMT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
IPI:IPI00818237 Ensembl:ENSGALT00000036791 Uniprot:F1NMT5
Length = 200
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQVEIN-EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>UNIPROTKB|Q92930 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030911 "TPR domain
binding" evidence=IEA] [GO:0031346 "positive regulation of cell
projection organization" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0051461 "positive regulation of corticotropin
secretion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0015031 "protein transport" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0034332 "adherens junction
organization" evidence=ISS] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0003924
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 EMBL:AC016207 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 OMA:TSFFRCL CTD:51762 KO:K07902 EMBL:AB038995
EMBL:AK001111 EMBL:AL833365 EMBL:BC020654 EMBL:U66624
IPI:IPI00024282 RefSeq:NP_057614.1 UniGene:Hs.389733
ProteinModelPortal:Q92930 SMR:Q92930 IntAct:Q92930 STRING:Q92930
PhosphoSite:Q92930 DMDM:13638434 PaxDb:Q92930 PeptideAtlas:Q92930
PRIDE:Q92930 DNASU:51762 Ensembl:ENST00000321437 GeneID:51762
KEGG:hsa:51762 UCSC:uc002alz.3 GeneCards:GC15P063481
HGNC:HGNC:30273 MIM:613532 neXtProt:NX_Q92930 PharmGKB:PA134944620
InParanoid:Q92930 PhylomeDB:Q92930 ChiTaRS:RAB8B GenomeRNAi:51762
NextBio:55874 ArrayExpress:Q92930 Bgee:Q92930 CleanEx:HS_RAB8B
Genevestigator:Q92930 GermOnline:ENSG00000166128 Uniprot:Q92930
Length = 207
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAF-FTLARDIMTK 172
>UNIPROTKB|Q5REC9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0034332
"adherens junction organization" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0034332 PROSITE:PS51419
GO:GO:0019003 HOVERGEN:HBG009351 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:CR857602 RefSeq:NP_001124875.1 UniGene:Pab.18127
ProteinModelPortal:Q5REC9 SMR:Q5REC9 PRIDE:Q5REC9
Ensembl:ENSPPYT00000007720 Ensembl:ENSPPYT00000033546
GeneID:100171739 KEGG:pon:100171739 InParanoid:Q5REC9
Uniprot:Q5REC9
Length = 207
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSTNVEEAF-FTLARDIMTK 172
>MGI|MGI:894308 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005768 "endosome" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:894308 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0031901 GO:GO:0000139 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 CTD:23011 KO:K07890
OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC055042 EMBL:M79302
IPI:IPI00337980 PIR:A38879 RefSeq:NP_077774.1 UniGene:Mm.21936
ProteinModelPortal:P35282 SMR:P35282 IntAct:P35282 STRING:P35282
PhosphoSite:P35282 PaxDb:P35282 PRIDE:P35282
Ensembl:ENSMUST00000020343 GeneID:216344 KEGG:mmu:216344
InParanoid:P35282 NextBio:375111 Bgee:P35282 CleanEx:MM_RAB21
Genevestigator:P35282 GermOnline:ENSMUSG00000020132 Uniprot:P35282
Length = 222
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 73
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 129
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 130 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 188
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 189 KGNGSSQAGAARRGVQII-DDEPQ 211
>MGI|MGI:2442982 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030911 "TPR domain binding"
evidence=ISO] [GO:0031346 "positive regulation of cell projection
organization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0034332 "adherens junction organization"
evidence=ISO] [GO:0045046 "protein import into peroxisome membrane"
evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051286 "cell tip" evidence=ISO] [GO:0051461 "positive
regulation of corticotropin secretion" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442982
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0031410
GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346
GO:GO:0045046 HOGENOM:HOG000233968 OMA:TSFFRCL CTD:51762 KO:K07902
ChiTaRS:RAB8B EMBL:AK084650 EMBL:AK155621 EMBL:BC059208
IPI:IPI00411115 RefSeq:NP_775589.1 UniGene:Mm.260376
ProteinModelPortal:P61028 SMR:P61028 IntAct:P61028 STRING:P61028
PhosphoSite:P61028 PaxDb:P61028 PRIDE:P61028
Ensembl:ENSMUST00000041139 GeneID:235442 KEGG:mmu:235442
InParanoid:P61028 NextBio:382678 Bgee:P61028 CleanEx:MM_RAB8B
Genevestigator:P61028 GermOnline:ENSMUSG00000036943 Uniprot:P61028
Length = 207
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSTNVEEAF-FTLARDIMTK 172
>RGD|1303150 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005768 "endosome" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030659 "cytoplasmic vesicle
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1303150 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:Q9UL25 HOGENOM:HOG000233968
CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC079323
IPI:IPI00366221 RefSeq:NP_001004238.1 UniGene:Rn.162952
ProteinModelPortal:Q6AXT5 SMR:Q6AXT5 PhosphoSite:Q6AXT5
PRIDE:Q6AXT5 Ensembl:ENSRNOT00000005258 GeneID:299799
KEGG:rno:299799 UCSC:RGD:1303150 GeneTree:ENSGT00640000091439
InParanoid:Q6AXT5 NextBio:645786 Genevestigator:Q6AXT5
Uniprot:Q6AXT5
Length = 223
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 66/204 (32%), Positives = 113/204 (55%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 73
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 129
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V I E E+ + S+K++ IE+ L R+I + +++E A
Sbjct: 130 NKIDLEKERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 188
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 189 KGNGSSQAGAARRGVQII-DDEPQ 211
>RGD|628764 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0030911 "TPR domain binding"
evidence=IPI] [GO:0031346 "positive regulation of cell projection
organization" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0034332 "adherens junction organization"
evidence=IDA] [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA] [GO:0051461
"positive regulation of corticotropin secretion" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:628764 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0048471
GO:GO:0007264 GO:GO:0051286 GO:GO:0031410 GO:GO:0005778
GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
CTD:51762 KO:K07902 EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1
UniGene:Rn.10995 ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550
STRING:P70550 PhosphoSite:P70550 PRIDE:P70550
Ensembl:ENSRNOT00000024286 GeneID:266688 KEGG:rno:266688
UCSC:RGD:628764 InParanoid:P70550 NextBio:624500
ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSTNVEEAF-FTLARDIMTK 172
>UNIPROTKB|P70550 [details] [associations]
symbol:Rab8b "Ras-related protein Rab-8B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628764 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0048471 GO:GO:0007264 GO:GO:0051286
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1 UniGene:Rn.10995
ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550 STRING:P70550
PhosphoSite:P70550 PRIDE:P70550 Ensembl:ENSRNOT00000024286
GeneID:266688 KEGG:rno:266688 UCSC:RGD:628764 InParanoid:P70550
NextBio:624500 ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 253 (94.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 55/173 (31%), Positives = 100/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K +E++ F + R I +K
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSTNVEEAF-FTLARDIMTK 172
>UNIPROTKB|F1PE57 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:115273 KO:K07929 EMBL:AAEX03001701
OMA:RFRCITR RefSeq:XP_544457.1 Ensembl:ENSCAFT00000018630
GeneID:487331 KEGG:cfa:487331 Uniprot:F1PE57
Length = 220
Score = 223 (83.6 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 64/212 (30%), Positives = 109/212 (51%)
Query: 241 YPILITGDSTVGKTSYVQGFV-------QNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVK 293
+ I + GD+ VGKTS ++ +V + + TVGV+F +++L + G VK
Sbjct: 10 FRIALLGDAAVGKTSLLRRYVAGAPGTPEPEPEPEPAPTVGVEFYSRMLQLR--AGPRVK 67
Query: 294 LQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGA-M 352
LQ+WD AG +R+ C++R +Y+N G +++FD+TNRKSFE + W ++ I G
Sbjct: 68 LQLWDTAGHERFRCITRSFYRNVVGVLLVFDVTNRKSFEHICDWHQEV----IATQGPDK 123
Query: 353 LPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICS 411
+ LL+ K DL R V E E + M+++E S+K + ++ + N + D I +
Sbjct: 124 VIFLLIGHKSDLRSTRCVSAQEAEELAASLG-MAFMETSAKNNCNVDLAFNTIADSIQQA 182
Query: 412 KRMEEEAVERK-SSIRLSEETLRDDQPKKLVP 442
+ +E +RL +T P + P
Sbjct: 183 LEQGDIKMEEDWGGVRLIHKTQVPRAPPRQQP 214
Score = 51 (23.0 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 110 KILVIGDSTVGKTSYVQGFV 129
+I ++GD+ VGKTS ++ +V
Sbjct: 11 RIALLGDAAVGKTSLLRRYV 30
>DICTYBASE|DDB_G0269174 [details] [associations]
symbol:rab1C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269174 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P55258 EMBL:AB015237
RefSeq:XP_646027.1 ProteinModelPortal:O76173 SMR:O76173
PRIDE:O76173 EnsemblProtists:DDB0191203 GeneID:8616975
KEGG:ddi:DDB_G0269174 OMA:CIRTIEL Uniprot:O76173
Length = 201
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/159 (35%), Positives = 96/159 (60%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
IL+ GDS VGK+ + F N+F D+Y +T+GVDF + + + G+ +KLQIWD AGQ
Sbjct: 36 ILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTI---ELDGKKIKLQIWDTAGQ 92
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+ + G II++D+T+ SF S+ +W D+D + ++L L++ +KC
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDR---FASPSVLK-LIVGNKC 148
Query: 363 DLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
DL R V+ + + N + +E S+KE I+++
Sbjct: 149 DLNSKRAVDFKIAKKFADELN-IPIMETSAKESTAIDEA 186
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
IL+ GDS VGK+ + F N+F D+Y +T+GVDF + + + G+ +KLQIWD
Sbjct: 36 ILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTI---ELDGKKIKLQIWD 88
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 79 PARELCKSNSPSPRASVIGFEPRPSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYK 138
P++E S S + + + G E P + + +LKILVIGDS VGK+ + F N+F D+Y
Sbjct: 5 PSKEGNGSFSSTSTSFIHGSESHP-EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYI 63
Query: 139 NTVGVDFSTKLL 150
+T+GVDF + +
Sbjct: 64 STIGVDFCIRTI 75
>UNIPROTKB|Q6IQ22 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=IEA] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0044257 "cellular protein catabolic process"
evidence=ISS] [GO:0005764 "lysosome" evidence=ISS] [GO:0055038
"recycling endosome membrane" evidence=ISS] [GO:0019003 "GDP
binding" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 EMBL:CH471113 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG45757M EMBL:AP001793 EMBL:BC050338 EMBL:BC071600
EMBL:BC098407 IPI:IPI00419932 RefSeq:NP_001020471.2
UniGene:Hs.270074 PDB:2IL1 PDBsum:2IL1 ProteinModelPortal:Q6IQ22
SMR:Q6IQ22 STRING:Q6IQ22 PhosphoSite:Q6IQ22 DMDM:122064944
PaxDb:Q6IQ22 PRIDE:Q6IQ22 DNASU:201475 Ensembl:ENST00000329286
GeneID:201475 KEGG:hsa:201475 UCSC:uc002knp.3 CTD:201475
GeneCards:GC18P008600 HGNC:HGNC:31332 HPA:HPA040727
neXtProt:NX_Q6IQ22 PharmGKB:PA142671102 InParanoid:Q6IQ22 KO:K07907
OMA:CEVDREI ChiTaRS:RAB12 EvolutionaryTrace:Q6IQ22
GenomeRNAi:201475 NextBio:90147 Bgee:Q6IQ22 CleanEx:HS_RAB12
Genevestigator:Q6IQ22 Uniprot:Q6IQ22
Length = 244
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 61/201 (30%), Positives = 111/201 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD AGQ
Sbjct: 45 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWDTAGQ 101
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ ++ YY+++ G I+++D+T +++F+ + +W +D D A L LL+ +K
Sbjct: 102 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASED--AEL--LLVGNKL 157
Query: 363 DLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
D DR++ + E Q M + E S+K++ +++ LVD I+ K+M + +
Sbjct: 158 DCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL--KKMPLDILRN 215
Query: 422 KSSIRLSEETLRDDQPKKLVP 442
+ S + + P +L P
Sbjct: 216 ELSNSILSLQPEPEIPPELPP 236
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I G VGKTS ++ F + F + K+TVGVDF K + + G+ ++LQIWD
Sbjct: 45 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELR---GKKIRLQIWD 97
>UNIPROTKB|Q5F470 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0055037 GO:GO:0007409
PROSITE:PS51419 GO:GO:0005932 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:CDANDKR
EMBL:AJ851430 IPI:IPI00591966 RefSeq:NP_001026675.1
UniGene:Gga.16249 ProteinModelPortal:Q5F470 SMR:Q5F470 PRIDE:Q5F470
Ensembl:ENSGALT00000006368 GeneID:428352 KEGG:gga:428352
InParanoid:Q5F470 NextBio:20829370 Uniprot:Q5F470
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 63/201 (31%), Positives = 116/201 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
KCD D RQV + E + + + ++E S+K ++ IE++ F + R I +K M+++ +
Sbjct: 122 KCDANDKRQVSREQGEKLAASFG-IKFMETSAKANINIENAF-FTLARDIKAK-MDKK-L 177
Query: 420 ERKSSIRLSEET-LRDDQPKK 439
E S ++ + DQ KK
Sbjct: 178 EGNSPQGSNQGVKITPDQQKK 198
>UNIPROTKB|A6QLS9 [details] [associations]
symbol:RAB10 "RAB10 protein" species:9913 "Bos taurus"
[GO:0072659 "protein localization to plasma membrane" evidence=IEA]
[GO:0072372 "primary cilium" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0032593 "insulin-responsive
compartment" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903
OMA:WKSKCCS GeneTree:ENSGT00700000104031 EMBL:DAAA02031611
EMBL:DAAA02031612 EMBL:DAAA02031613 EMBL:BC148073 IPI:IPI00708125
RefSeq:NP_001094758.1 UniGene:Bt.103028 SMR:A6QLS9
Ensembl:ENSBTAT00000001303 GeneID:783373 KEGG:bta:783373
InParanoid:A6QLS9 NextBio:20926051 Uniprot:A6QLS9
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>UNIPROTKB|F2Z4P9 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 UniGene:Cfa.3815
NextBio:20817448 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
RefSeq:NP_001003277.2 ProteinModelPortal:F2Z4P9 SMR:F2Z4P9
PRIDE:F2Z4P9 Ensembl:ENSCAFT00000006816 GeneID:403958
KEGG:cfa:403958 Uniprot:F2Z4P9
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>UNIPROTKB|P61007 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0042995
GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901
EMBL:X56385 PIR:B36364 RefSeq:NP_001003152.1 UniGene:Cfa.3637
ProteinModelPortal:P61007 SMR:P61007 MINT:MINT-155827 STRING:P61007
PRIDE:P61007 Ensembl:ENSCAFT00000025007 GeneID:403773
KEGG:cfa:403773 InParanoid:P61007 OMA:SNVEQHA NextBio:20817272
Uniprot:P61007
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>UNIPROTKB|P61006 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0051223 "regulation of
protein transport" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137
"Rab GTPase binding" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0019003
"GDP binding" evidence=IDA] [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IDA] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
EMBL:CH471106 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210
PDB:3QBT PDBsum:3QBT HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:4218 KO:K07901 OMA:SNVEQHA EMBL:X56741 EMBL:S53268
EMBL:AF498943 EMBL:BT007184 EMBL:CR536583 EMBL:CR542274
EMBL:BC002977 IPI:IPI00028481 PIR:B49647 RefSeq:NP_005361.2
UniGene:Hs.642874 PDB:3TNF PDBsum:3TNF ProteinModelPortal:P61006
SMR:P61006 DIP:DIP-43703N IntAct:P61006 MINT:MINT-1416277
STRING:P61006 PhosphoSite:P61006 DMDM:46810392 PaxDb:P61006
PeptideAtlas:P61006 PRIDE:P61006 DNASU:4218 Ensembl:ENST00000300935
GeneID:4218 KEGG:hsa:4218 UCSC:uc002ndn.4 GeneCards:GC19P016222
HGNC:HGNC:7007 MIM:165040 neXtProt:NX_P61006 PharmGKB:PA30743
InParanoid:P61006 PhylomeDB:P61006 ChiTaRS:RAB8A GenomeRNAi:4218
NextBio:16637 Bgee:P61006 CleanEx:HS_RAB8A Genevestigator:P61006
GermOnline:ENSG00000167461 Uniprot:P61006
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>UNIPROTKB|P61026 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0005768 "endosome" evidence=IDA] [GO:0032593
"insulin-responsive compartment" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032869
"cellular response to insulin stimulus" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0006893
"Golgi to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
EMBL:CH471053 GO:GO:0030670 GO:GO:0032869 GO:GO:0016197
GO:GO:0055037 GO:GO:0007409 GO:GO:0005802 GO:GO:0072372
GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:10890 KO:K07903 EMBL:AF086917 EMBL:AF297660 EMBL:AF106681
EMBL:AL136650 EMBL:AK023223 EMBL:AF498945 EMBL:CR457303
EMBL:BC000896 IPI:IPI00016513 RefSeq:NP_057215.3 UniGene:Hs.467960
ProteinModelPortal:P61026 SMR:P61026 IntAct:P61026
MINT:MINT-1404404 STRING:P61026 PhosphoSite:P61026 DMDM:46577638
PaxDb:P61026 PeptideAtlas:P61026 PRIDE:P61026 DNASU:10890
Ensembl:ENST00000264710 GeneID:10890 KEGG:hsa:10890 UCSC:uc002rgv.3
GeneCards:GC02P026256 HGNC:HGNC:9759 HPA:HPA045611 MIM:612672
neXtProt:NX_P61026 PharmGKB:PA34100 InParanoid:P61026 OMA:WKSKCCS
PhylomeDB:P61026 ChiTaRS:RAB10 GenomeRNAi:10890 NextBio:41349
ArrayExpress:P61026 Bgee:P61026 CleanEx:HS_RAB10
Genevestigator:P61026 Uniprot:P61026
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>UNIPROTKB|F2Z5F2 [details] [associations]
symbol:RAB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0072372 "primary cilium" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0031489 "myosin
V binding" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:CU571288 RefSeq:NP_001229989.1
UniGene:Ssc.5049 ProteinModelPortal:F2Z5F2 SMR:F2Z5F2 PRIDE:F2Z5F2
Ensembl:ENSSSCT00000009379 GeneID:100526104 KEGG:ssc:100526104
ArrayExpress:F2Z5F2 Uniprot:F2Z5F2
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>UNIPROTKB|F2Z5I8 [details] [associations]
symbol:RAB8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048210
"Golgi vesicle fusion to target membrane" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031513 "nonmotile primary
cilium" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0055037 GO:GO:0005932 GO:GO:0042384
GO:GO:0031513 GO:GO:0006904 GO:GO:0048210
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:SNVEQHA
EMBL:CU856246 RefSeq:NP_001230731.1 UniGene:Ssc.24907
ProteinModelPortal:F2Z5I8 SMR:F2Z5I8 PRIDE:F2Z5I8
Ensembl:ENSSSCT00000015126 GeneID:100511006 KEGG:ssc:100511006
Uniprot:F2Z5I8
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>UNIPROTKB|Q4R5P1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AB169502
ProteinModelPortal:Q4R5P1 SMR:Q4R5P1 PRIDE:Q4R5P1 Uniprot:Q4R5P1
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>UNIPROTKB|Q5R5U1 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0005768
"endosome" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0005802 "trans-Golgi network" evidence=ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0016197 "endosomal transport"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0032593 "insulin-responsive compartment" evidence=ISS]
[GO:0032869 "cellular response to insulin stimulus" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0045200 "establishment of neuroblast polarity"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
[GO:0097051 "establishment of protein localization to endoplasmic
reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HSSP:P55258
CTD:10890 KO:K07903 EMBL:CR859178 EMBL:CR860762
RefSeq:NP_001126682.1 UniGene:Pab.18148 ProteinModelPortal:Q5R5U1
SMR:Q5R5U1 PRIDE:Q5R5U1 GeneID:100173682 KEGG:pon:100173682
InParanoid:Q5R5U1 Uniprot:Q5R5U1
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>MGI|MGI:105066 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005802 "trans-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045200 "establishment of neuroblast polarity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:0071782
"endoplasmic reticulum tubular network" evidence=ISO] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
[GO:0072372 "primary cilium" evidence=ISO;IDA] [GO:0072659 "protein
localization to plasma membrane" evidence=IMP] [GO:0097051
"establishment of protein localization to endoplasmic reticulum
membrane" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105066 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0030670 GO:GO:0032869
GO:GO:0016197 GO:GO:0055037 GO:GO:0007409 GO:GO:0005802
GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593
GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903 OMA:WKSKCCS ChiTaRS:RAB10
EMBL:AF035646 EMBL:AK008725 EMBL:AK028320 EMBL:AK087964
EMBL:BC056374 IPI:IPI00130118 RefSeq:NP_057885.1 UniGene:Mm.378993
ProteinModelPortal:P61027 SMR:P61027 IntAct:P61027 STRING:P61027
PhosphoSite:P61027 PaxDb:P61027 PRIDE:P61027
Ensembl:ENSMUST00000021001 GeneID:19325 KEGG:mmu:19325
InParanoid:P61027 NextBio:296287 Bgee:P61027 CleanEx:MM_RAB10
Genevestigator:P61027 GermOnline:ENSMUSG00000020671 Uniprot:P61027
Length = 200
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>MGI|MGI:96960 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031513
"nonmotile primary cilium" evidence=ISO;IDA] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0042384
"cilium assembly" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048210 "Golgi vesicle fusion to target membrane"
evidence=ISO] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:96960
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0015031
GO:GO:0055037 GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932
GO:GO:0042384 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 PDB:2FU5 PDBsum:2FU5
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:4218
KO:K07901 OMA:SNVEQHA EMBL:S53270 EMBL:AK076048 EMBL:AK079306
EMBL:AK080740 EMBL:BC019990 IPI:IPI00331128 RefSeq:NP_075615.2
UniGene:Mm.162811 ProteinModelPortal:P55258 SMR:P55258
IntAct:P55258 STRING:P55258 PhosphoSite:P55258 PaxDb:P55258
PRIDE:P55258 Ensembl:ENSMUST00000003121 GeneID:17274 KEGG:mmu:17274
EvolutionaryTrace:P55258 NextBio:291770 Bgee:P55258
CleanEx:MM_RAB8A Genevestigator:P55258
GermOnline:ENSMUSG00000003037 Uniprot:P55258
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>RGD|621144 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IDA] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA;ISO] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042384
"cilium assembly" evidence=IEA;ISO] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IDA;IMP] [GO:0048210 "Golgi vesicle
fusion to target membrane" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051223
"regulation of protein transport" evidence=IDA;IMP] [GO:0055037
"recycling endosome" evidence=IEA;ISO] Reactome:REACT_97881
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:621144 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0048471
GO:GO:0007264 GO:GO:0014069 GO:GO:0015031 GO:GO:0043025
GO:GO:0016023 GO:GO:0007409 PROSITE:PS51419 GO:GO:0048169
GO:GO:0051223 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031
CTD:4218 KO:K07901 EMBL:BC071176 EMBL:BC105863 EMBL:M83675
IPI:IPI00196789 PIR:A42148 RefSeq:NP_446450.2 UniGene:Rn.16064
ProteinModelPortal:P35280 SMR:P35280 STRING:P35280
PhosphoSite:P35280 PRIDE:P35280 Ensembl:ENSRNOT00000020748
GeneID:117103 KEGG:rno:117103 UCSC:RGD:621144 NextBio:619992
ArrayExpress:P35280 Genevestigator:P35280
GermOnline:ENSRNOG00000014621 Uniprot:P35280
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 55/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ F + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-FTLARDIKAK 172
>WB|WBGene00004279 [details] [associations]
symbol:rab-21 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 EMBL:Z66499 HOGENOM:HOG000233968
HSSP:P20339 KO:K07890 GeneTree:ENSGT00640000091439 PIR:T24268
RefSeq:NP_495854.1 ProteinModelPortal:Q22045 SMR:Q22045
IntAct:Q22045 STRING:Q22045 PaxDb:Q22045 EnsemblMetazoa:T01B7.3.1
EnsemblMetazoa:T01B7.3.2 GeneID:187932 KEGG:cel:CELE_T01B7.3
UCSC:T01B7.3 CTD:187932 WormBase:T01B7.3 InParanoid:Q22045
OMA:GARYLET NextBio:937000 Uniprot:Q22045
Length = 207
Score = 252 (93.8 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 63/189 (33%), Positives = 105/189 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ G+ VGK+S V FV+NKF + +T+ F K ++ + L IWD A
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDC---QADLHIWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ++Y + +YY+ S+G +++FD+T+RKSFE V W L+ K L N A + L++ +
Sbjct: 70 GQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWV--LEIKTCLGNTAEI--LIVGN 125
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII-CSKRMEEEA 418
K DL + RQV + EA + ++E S+++++ I D+ L ++I S+ E
Sbjct: 126 KIDLEEERQVTRQDAEAYAESEGAL-YMETSAQDNVGISDAFESLTAKMIEHSRTRSTEP 184
Query: 419 VERKSSIRL 427
SIRL
Sbjct: 185 PSTNRSIRL 193
>CGD|CAL0006268 [details] [associations]
symbol:YPT72 species:5476 "Candida albicans" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0036187 "cell growth mode
switching, budding to filamentous" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0061191 "positive
regulation of vacuole fusion, non-autophagic" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0007035
"vacuolar acidification" evidence=IEA] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=IEA] [GO:0034727 "piecemeal microautophagy
of nucleus" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0000011 "vacuole inheritance"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0051469
"vesicle fusion with vacuole" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 59/211 (27%), Positives = 111/211 (52%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS +Q FV +KF YK T+G DF TK ++ + V LQIWD AGQ
Sbjct: 13 VIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDN--NKSVTLQIWDTAGQ 70
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++ FD+TN KS ++ WK + + + N P +++ +K
Sbjct: 71 ERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFIIIGNKI 130
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
D+ D + +I ++ + N ++ ++ + + E S V+ + + + A++++
Sbjct: 131 DVDDSK----KIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQQE 186
Query: 423 SSIRLSEETLRDDQPKKL-VPADKVSTYCWC 452
+ + DD + + D ++ C C
Sbjct: 187 ELNASNGNDVNDDYNDAINIHLDSEASACGC 217
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S +T+LK++++GDS VGKTS +Q FV +KF YK T+G DF TK
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTK 50
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS +Q FV +KF YK T+G DF TK ++ + V LQIWD
Sbjct: 13 VIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDN--NKSVTLQIWD 66
>UNIPROTKB|Q59ZB7 [details] [associations]
symbol:YPT7 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0000324 "fungal-type
vacuole" evidence=IDA] [GO:0007033 "vacuole organization"
evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036180 "filamentous growth
of a population of unicellular organisms in response to biotic
stimulus" evidence=IMP] [GO:0036187 "cell growth mode switching,
budding to filamentous" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 59/211 (27%), Positives = 111/211 (52%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS +Q FV +KF YK T+G DF TK ++ + V LQIWD AGQ
Sbjct: 13 VIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDN--NKSVTLQIWDTAGQ 70
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++ FD+TN KS ++ WK + + + N P +++ +K
Sbjct: 71 ERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFIIIGNKI 130
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERK 422
D+ D + +I ++ + N ++ ++ + + E S V+ + + + A++++
Sbjct: 131 DVDDSK----KIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQQE 186
Query: 423 SSIRLSEETLRDDQPKKL-VPADKVSTYCWC 452
+ + DD + + D ++ C C
Sbjct: 187 ELNASNGNDVNDDYNDAINIHLDSEASACGC 217
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 103 SDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
S +T+LK++++GDS VGKTS +Q FV +KF YK T+G DF TK
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTK 50
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS +Q FV +KF YK T+G DF TK ++ + V LQIWD
Sbjct: 13 VIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDN--NKSVTLQIWD 66
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 58/190 (30%), Positives = 109/190 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ L + GR VK QIWD A
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE---GRTVKAQIWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+T +FE+V +W +L D+ ++ +L+ +
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHA--DSNIVI--MLIGN 125
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVD---RIICSKRMEE 416
K DL R V + ++ + +S+IE S+ E L +E + ++ RII K +
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEG-LSFIETSALEALNVEKAFQTILSEVYRIISKKSISS 184
Query: 417 EAVERKSSIR 426
+ ++I+
Sbjct: 185 DQTTANANIK 194
Score = 121 (47.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 165 PIQTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 222
P + YL +++ GDS VGK++ + F +N+F K+T+GV+F+T+ L + GR V
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE---GRTV 61
Query: 223 KLQIWD 228
K QIWD
Sbjct: 62 KAQIWD 67
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 56/187 (29%), Positives = 110/187 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L DN ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DNNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKS 423
+ +S
Sbjct: 184 RSAHDES 190
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQRPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 62/209 (29%), Positives = 118/209 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L D+ ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DSNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRMEE 416
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 417 EAVERKSS----IRLSEETLRDDQ-PKKL 440
A +S + +S D Q P KL
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKL 212
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>FB|FBgn0262518 [details] [associations]
symbol:Rab8 "Rab8" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104031 OMA:SNVEQHA EMBL:AY069671 EMBL:D84347
EMBL:AB112933 RefSeq:NP_001246837.1 RefSeq:NP_524172.1
UniGene:Dm.2015 SMR:O18338 MINT:MINT-864123 STRING:O18338
EnsemblMetazoa:FBtr0074921 EnsemblMetazoa:FBtr0308833 GeneID:40168
KEGG:dme:Dmel_CG8287 UCSC:CG8287-RA CTD:40168 FlyBase:FBgn0262518
InParanoid:O18338 OrthoDB:EOG4HT788 GenomeRNAi:40168 NextBio:817374
Uniprot:O18338
Length = 207
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 57/178 (32%), Positives = 100/178 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + + +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTI---ELDNKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+T KSFE++ W +++ D ML L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKML----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICS--KRME 415
KC+L D RQV E + +Y + ++E S+K + +E++ L I KRME
Sbjct: 122 KCELTDKRQVSKERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRME 178
>UNIPROTKB|F1NC27 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:AADN02009843 IPI:IPI00581530
Ensembl:ENSGALT00000016553 Uniprot:F1NC27
Length = 228
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 65/204 (31%), Positives = 112/204 (54%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ GG+ V L IWD
Sbjct: 23 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---IGGKRVNLAIWDT 79
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 80 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 135
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V + E E + S+K++ IE+ L R+I + +++E A
Sbjct: 136 NKIDLEKERHVSVQEAETYAESVGAKHY-HTSAKQNKGIEELFLDLCKRMIETAQVDERA 194
Query: 419 VERKSS----IRLSEETLRDDQPK 438
SS R + + DD+P+
Sbjct: 195 RGNGSSQSGTARRGVQII-DDEPQ 217
>UNIPROTKB|J9NUV0 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
Ensembl:ENSCAFT00000048477 Uniprot:J9NUV0
Length = 209
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 55/170 (32%), Positives = 100/170 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171
>UNIPROTKB|P24409 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0007409 "axonogenesis"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0030859 "polarized epithelial cell
differentiation" evidence=IMP] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0000145 "exocyst" evidence=IDA] [GO:0072372 "primary cilium"
evidence=IDA] [GO:0061467 "basolateral protein localization"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0030670 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200
GO:GO:0030859 HOGENOM:HOG000233968 EMBL:X56387 PIR:D36364
UniGene:Cfa.3815 ProteinModelPortal:P24409 SMR:P24409 STRING:P24409
PRIDE:P24409 InParanoid:P24409 OrthoDB:EOG4K3KX6 NextBio:20817448
Uniprot:P24409
Length = 200
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKVNINIEKAFLTLAEDILRKTPVKE 178
>MGI|MGI:1890695 [details] [associations]
symbol:Rab9 "RAB9, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005764 "lysosome" evidence=ISO]
[GO:0005768 "endosome" evidence=IEA] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1890695 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045921 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104345
KO:K07899 EMBL:AB027290 EMBL:AK010710 EMBL:AK017301 EMBL:AK032133
EMBL:BC008160 IPI:IPI00127820 RefSeq:NP_062747.1 UniGene:Mm.25306
PDB:1YZL PDBsum:1YZL ProteinModelPortal:Q9R0M6 SMR:Q9R0M6
STRING:Q9R0M6 PhosphoSite:Q9R0M6 PaxDb:Q9R0M6 PRIDE:Q9R0M6
Ensembl:ENSMUST00000112091 GeneID:56382 KEGG:mmu:56382 CTD:56382
InParanoid:Q9R0M6 EvolutionaryTrace:Q9R0M6 NextBio:312468
Bgee:Q9R0M6 CleanEx:MM_RAB9 Genevestigator:Q9R0M6
GermOnline:ENSMUSG00000040577 Uniprot:Q9R0M6
Length = 201
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 53/180 (29%), Positives = 95/180 (52%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD VGK+S + +V NKF +T+GV+F K L + G V +QIWD A
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDL---EVDGHFVTMQIWDTA 64
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ + +Y+ SD C++ F + + +SF+++ WK + + P ++L +
Sbjct: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 124
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
K D+ +RQV E +A C + E S+K+ + + V RI+ ++ E ++
Sbjct: 125 KTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQ 184
>RGD|1562617 [details] [associations]
symbol:Rab7b "Rab7b, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late
endosome" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0034164 "negative
regulation of toll-like receptor 9 signaling pathway" evidence=IEA]
[GO:0034499 "late endosome to Golgi transport" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1562617 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0005764 GO:GO:0005770
EMBL:CH473958 GO:GO:0034144 GeneTree:ENSGT00700000104345 CTD:338382
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164
IPI:IPI00869695 RefSeq:NP_001102798.1 UniGene:Rn.140691
Ensembl:ENSRNOT00000009280 GeneID:501854 KEGG:rno:501854
UCSC:RGD:1562617 NextBio:710024 Uniprot:D4A7A8
Length = 199
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 55/167 (32%), Positives = 92/167 (55%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I G VGKTS + +V F + Y+ T+G +K++ +KLQIWD GQ
Sbjct: 11 LIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIII---LDDTTLKLQIWDTGGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ M +Y+ SDGCI+ FD+T+ +SFE++ W+ D+ +K I+ P ++L +K
Sbjct: 68 ERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAK-IVPMEQSYPMVVLGNKI 126
Query: 363 DLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
DL DR+V C + + M + EVS+K + + + L R +
Sbjct: 127 DLEDRKVPQEVAHEWCKEKD-MPYFEVSAKNDINVVQAFEVLASRAL 172
>ZFIN|ZDB-GENE-040718-304 [details] [associations]
symbol:rab10 "RAB10, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-304 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890
KO:K07903 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:CABZ01076797 EMBL:CABZ01076798 EMBL:CABZ01076799 EMBL:BC076234
IPI:IPI00486247 RefSeq:NP_001002566.1 UniGene:Dr.33795 SMR:Q6DGV5
STRING:Q6DGV5 Ensembl:ENSDART00000067776 GeneID:436839
KEGG:dre:436839 InParanoid:Q6DGV5 NextBio:20831271 Uniprot:Q6DGV5
Length = 201
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 56/177 (31%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+DF K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQVEIN-EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMEDKRVVPKAKGEQIAKEHG-IRFFETSAKANINIEKAFLTLAEDILKKTPVKE 178
>TAIR|locus:2094029 [details] [associations]
symbol:RAB7B "RAB GTPase homolog G3F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0007033 "vacuole organization"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005634 GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 GO:GO:0015031 EMBL:AB026654 PROSITE:PS51419
eggNOG:COG1100 HOGENOM:HOG000233968 KO:K07897 HSSP:P32939
EMBL:AB071846 EMBL:AY035137 EMBL:AY059072 EMBL:AY084266
IPI:IPI00537989 RefSeq:NP_188512.1 UniGene:At.24625
ProteinModelPortal:Q9LS94 SMR:Q9LS94 PaxDb:Q9LS94 PRIDE:Q9LS94
EnsemblPlants:AT3G18820.1 GeneID:821415 KEGG:ath:AT3G18820
TAIR:At3g18820 InParanoid:Q9LS94 OMA:FETSAKV PhylomeDB:Q9LS94
ProtClustDB:CLSN2684537 Genevestigator:Q9LS94 Uniprot:Q9LS94
Length = 206
Score = 250 (93.1 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
++I GDS VGKTS + +V KF + YK T+G DF TK + ++ R LQIWD AGQ
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---QFEDRLFTLQIWDTAGQ 67
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+R+ + +Y+ +D C++++D+ + KSFE++ W+ + + + P +L+ +K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKV 127
Query: 363 DLPD---RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
D+ D R V + +A C + + E S+K +E++ + + S EE
Sbjct: 128 DVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEEE 184
Score = 130 (50.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 102 PSDAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTK 148
PS T+LK++++GDS VGKTS + +V KF + YK T+G DF TK
Sbjct: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
++I GDS VGKTS + +V KF + YK T+G DF TK + ++ R LQIWD
Sbjct: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---QFEDRLFTLQIWD 63
>RGD|620114 [details] [associations]
symbol:Rab27b "RAB27B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005795 "Golgi stack" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IDA] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030140 "trans-Golgi network transport
vesicle" evidence=IEA;ISO] [GO:0030667 "secretory granule membrane"
evidence=IDA] [GO:0032585 "multivesicular body membrane"
evidence=IEA;ISO] [GO:0042589 "zymogen granule membrane"
evidence=IDA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA;ISO] [GO:0071985 "multivesicular body sorting pathway"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620114 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0017157
GO:GO:0042589 GO:GO:0071985 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF325693 IPI:IPI00200425 RefSeq:NP_445911.1
UniGene:Rn.112603 ProteinModelPortal:Q99P74 SMR:Q99P74
STRING:Q99P74 PRIDE:Q99P74 Ensembl:ENSRNOT00000016369 GeneID:84590
KEGG:rno:84590 InParanoid:Q99P74 NextBio:617189
Genevestigator:Q99P74 GermOnline:ENSRNOG00000012176 Uniprot:Q99P74
Length = 218
Score = 250 (93.1 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 63/188 (33%), Positives = 110/188 (58%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYG-----GRPVK--LQ 295
+L GDS VGKT+++ + NKF + TVG+DF K + + G G+ K LQ
Sbjct: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHLQ 71
Query: 296 IWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPC 355
+WD AGQ+R+ ++ +++++ G ++MFDLT+++SF +V W L + +N ++
Sbjct: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV-- 129
Query: 356 LLLASKCDLPDRQVEINEIEA--VCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKR 413
L+ +K DL D++ E+NE +A + +Y + + E S+ +E S+ L+D I+ KR
Sbjct: 130 -LIGNKADLLDQR-EVNERQARELAEKYG-IPYFETSAATGQNVEKSVETLLDLIM--KR 184
Query: 414 MEEEAVER 421
ME+ VE+
Sbjct: 185 MEK-CVEK 191
>ZFIN|ZDB-GENE-070620-16 [details] [associations]
symbol:rab8b "RAB8B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070620-16 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
GeneTree:ENSGT00700000104031 CTD:51762 KO:K07902 EMBL:CR450827
EMBL:BC142846 IPI:IPI00854251 RefSeq:NP_001092729.1
UniGene:Dr.151937 SMR:A5PLC7 Ensembl:ENSDART00000099327
GeneID:100093706 KEGG:dre:100093706 OMA:RSRGDYD NextBio:20788636
Uniprot:A5PLC7
Length = 209
Score = 250 (93.1 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 55/179 (30%), Positives = 102/179 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIIC--SKRMEE 416
KCD+ D RQV E + Y + ++E S+K +E++ L I+ +++M E
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSTNVEEAFVTLARDIMTRLNRKMNE 179
>WB|WBGene00004286 [details] [associations]
symbol:rab-39 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 EMBL:Z47808 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 GeneTree:ENSGT00690000101664 OMA:VEDGWDG PIR:T20339
RefSeq:NP_495984.2 UniGene:Cel.20279 ProteinModelPortal:Q18969
SMR:Q18969 PaxDb:Q18969 EnsemblMetazoa:D2013.1 GeneID:183941
KEGG:cel:CELE_D2013.1 UCSC:D2013.1 CTD:183941 WormBase:D2013.1
InParanoid:Q18969 NextBio:922934 Uniprot:Q18969
Length = 229
Score = 249 (92.7 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 60/173 (34%), Positives = 99/173 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
Y +++ GDSTVGK+S ++ F + K + TVGVDF +++ + G VKLQ+WD A
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRP--GYRVKLQLWDTA 75
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLP--CL-- 356
GQ+++ +++ YY+NS G + ++D TNR+SFE V W + L+ G P C+
Sbjct: 76 GQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKE----AALNLGGPSPSKCVFQ 131
Query: 357 LLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI 408
L+ +K D+ RQV E E +Y+ M +IE SS+ + ++ + + I
Sbjct: 132 LVGTKSDMDSQRQVNYEEGEYFA-KYHKMKFIETSSRTGDNVNEAFHMIAQEI 183
Score = 121 (47.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 163 FSPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 222
+ P+ Y +++ GDSTVGK+S ++ F + K + TVGVDF +++ + G V
Sbjct: 10 YGPLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRP--GYRV 67
Query: 223 KLQIWD 228
KLQ+WD
Sbjct: 68 KLQLWD 73
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 249 (92.7 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 56/178 (31%), Positives = 106/178 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD A
Sbjct: 12 FRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWDTA 68
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+ ++E+V +W +L DN ++ +L+ +
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA--DNNIVI--MLVGN 124
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSM-NFLVD--RIICSKRM 414
K DL R V +E A + N +S+IE S+ + +E++ N L + RI+ K+M
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQM 181
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +++ GDS VGK++ + F +N+F K+T+GV+F+T+ + + G+ +K QIWD
Sbjct: 12 FRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI---QVDGKTIKAQIWD 66
>UNIPROTKB|A4FV54 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0048210 "Golgi vesicle fusion to target
membrane" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031513 "nonmotile primary cilium" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003 GO:GO:0031513
GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 EMBL:BC123755
IPI:IPI00718035 RefSeq:NP_001098951.1 UniGene:Bt.9871
ProteinModelPortal:A4FV54 SMR:A4FV54 STRING:A4FV54 PRIDE:A4FV54
Ensembl:ENSBTAT00000021408 GeneID:100125881 KEGG:bta:100125881
CTD:4218 InParanoid:A4FV54 KO:K07901 OMA:CDANDKR NextBio:20788864
Uniprot:A4FV54
Length = 207
Score = 249 (92.7 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 54/173 (31%), Positives = 102/173 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSK 412
KCD+ D RQV E + Y + ++E S+K ++ +E++ + + R I +K
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF-YTLARDIKAK 172
>ZFIN|ZDB-GENE-040426-1983 [details] [associations]
symbol:rab42a "RAB42, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-1983
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HSSP:P01112 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 EMBL:CR385068 OMA:SAKCNSN
EMBL:BC060898 IPI:IPI00498203 RefSeq:NP_998207.1 UniGene:Dr.132981
Ensembl:ENSDART00000046530 GeneID:406315 KEGG:dre:406315 CTD:406315
InParanoid:Q6P977 OrthoDB:EOG4D7Z6M NextBio:20817942 Uniprot:Q6P977
Length = 213
Score = 249 (92.7 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 62/177 (35%), Positives = 103/177 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDSTVGK+S ++ F + D TVGVDF + + + G +KLQ+WD A
Sbjct: 9 FRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSIDIEP--GVKIKLQLWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+NS G +++FDLTNRK+F+ V +W ++ S+ IL + + +L+
Sbjct: 67 GQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHREV-SEHILPHHMVY--ILIGH 123
Query: 361 KCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
K DL DR+V +E E + + ++E S+K + +E + L I +M E
Sbjct: 124 KSDLSRDRKVTRDEAEQLAADLG-IRYVETSAKCNSNVERAFELLTRDIYELMKMGE 179
>UNIPROTKB|C9JJQ5 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC069335
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N EMBL:AC093087
HGNC:HGNC:19982 IPI:IPI00946179 ProteinModelPortal:C9JJQ5
SMR:C9JJQ5 STRING:C9JJQ5 Ensembl:ENST00000495590
ArrayExpress:C9JJQ5 Bgee:C9JJQ5 Uniprot:C9JJQ5
Length = 149
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 47/128 (36%), Positives = 80/128 (62%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L G+ VK+Q+WD A
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD---IDGKKVKMQVWDTA 74
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ +++ YY+++ II +DLT R +FES+ W H+++ A + +L+ +
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKY----GAANVVIMLIGN 130
Query: 361 KCDLPDRQ 368
KCDL +++
Sbjct: 131 KCDLWEKR 138
Score = 124 (48.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT VQ F + + +NT+GVDF+ + L G+ VK+Q+WD
Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD---IDGKKVKMQVWD 72
Score = 105 (42.0 bits), Expect = 0.00029, P = 0.00029
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 108 VLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLL 150
+ KI++IGDS VGKT VQ F + + +NT+GVDF+ + L
Sbjct: 17 LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSL 59
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 58/189 (30%), Positives = 108/189 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGKT+ + F +N+F K+T+GV+F+T+ L + G+ VK QIWD A
Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVE---GKTVKAQIWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+T R++F++V++W +L D+ ++ ++ +
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHA--DSNIVI--MMAGN 125
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRI--ICSKRM--EE 416
K DL + E + +S++E S+ E +E + ++ I I SK+ +
Sbjct: 126 KADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQ 185
Query: 417 EAVERKSSI 425
EA S+I
Sbjct: 186 EAAAANSAI 194
Score = 122 (48.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ I++ GDS VGKT+ + F +N+F K+T+GV+F+T+ L + G+ VK QIWD
Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVE---GKTVKAQIWD 67
>TAIR|locus:2129161 [details] [associations]
symbol:RAB1C "RAB GTPase homolog 1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IGI] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005773 GO:GO:0007264 GO:GO:0000139
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016192 GO:GO:0009555
GO:GO:0015031 GO:GO:0009860 PROSITE:PS51419 EMBL:Z97343
eggNOG:COG1100 EMBL:AL161546 HOGENOM:HOG000233968 HSSP:P07560
KO:K07874 UniGene:At.24811 ProtClustDB:CLSN2685987 EMBL:AF127134
EMBL:AY052204 EMBL:AY060495 EMBL:AK227290 IPI:IPI00546817
PIR:H71444 RefSeq:NP_193486.1 UniGene:At.22483 UniGene:At.48871
ProteinModelPortal:Q9SEH3 SMR:Q9SEH3 STRING:Q9SEH3 PaxDb:Q9SEH3
PRIDE:Q9SEH3 ProMEX:Q9SEH3 EnsemblPlants:AT4G17530.1 GeneID:827468
KEGG:ath:AT4G17530 TAIR:At4g17530 InParanoid:Q9SEH3 OMA:IDSTPVR
PhylomeDB:Q9SEH3 Genevestigator:Q9SEH3 Uniprot:Q9SEH3
Length = 202
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 52/160 (32%), Positives = 95/160 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGK+ + F + +LD+Y +T+GVDF + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQD---GKTIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G I+ +D+T+ +SF +V QW +++D + +N + LL+ +
Sbjct: 66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEID-RYASEN---VNKLLVGN 121
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
KCDL ++V E + ++E S+K +E++
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEA 161
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGK+ + F + +LD+Y +T+GVDF + + G+ +KLQIWD
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQD---GKTIKLQIWD 63
>UNIPROTKB|F1M225 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 IPI:IPI00951369
Ensembl:ENSRNOT00000020209 ArrayExpress:F1M225 Uniprot:F1M225
Length = 205
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 60/206 (29%), Positives = 114/206 (55%)
Query: 232 TLSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP 291
+LSP + +L+ GDS VGK+ + F + + ++Y +T+GVDF + + + G+
Sbjct: 3 SLSPEPDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI---ELDGKT 59
Query: 292 VKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGA 351
+KLQIWD AGQ+R+ ++ YY+ + G I+++D+T+++SF +V QW ++D + +N
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-RYASEN-- 116
Query: 352 MLPCLLLASKCDLPDRQV-EINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIIC 410
+ LL+ +KCDL ++V + + + ++E S+K +E S + I
Sbjct: 117 -VNKLLVGNKCDLTTKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI-- 172
Query: 411 SKRMEEEAVE---RKSSIRLSEETLR 433
KRM A KS++++ ++
Sbjct: 173 KKRMGPGATAGGAEKSNVKIQSTPVK 198
Score = 118 (46.6 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 169 PSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQI 226
P YL +L+ GDS VGK+ + F + + ++Y +T+GVDF + + + G+ +KLQI
Sbjct: 8 PDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI---ELDGKTIKLQI 64
Query: 227 WD 228
WD
Sbjct: 65 WD 66
>TAIR|locus:2082269 [details] [associations]
symbol:RABA4D "RAB GTPase homolog A4D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009860 "pollen tube growth"
evidence=RCA;IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0070382 "exocytic vesicle" evidence=IDA] [GO:0048868 "pollen
tube development" evidence=IGI;RCA] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0080092 "regulation of pollen tube growth"
evidence=IMP] [GO:0090404 "pollen tube tip" evidence=IDA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 EMBL:AC069473 GO:GO:0015031 GO:GO:0045177
GO:GO:0009860 GO:GO:0030659 EMBL:AP002063 PROSITE:PS51419
GO:GO:0070382 EMBL:AC069472 GO:GO:0090404 eggNOG:COG1100
GO:GO:0080092 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
EMBL:DQ056590 IPI:IPI00520600 RefSeq:NP_187823.1 UniGene:At.53275
ProteinModelPortal:Q9LH50 SMR:Q9LH50 STRING:Q9LH50 PaxDb:Q9LH50
PRIDE:Q9LH50 EnsemblPlants:AT3G12160.1 GeneID:820393
KEGG:ath:AT3G12160 TAIR:At3g12160 InParanoid:Q9LH50 OMA:RTDEDYN
PhylomeDB:Q9LH50 ProtClustDB:CLSN2684593 Genevestigator:Q9LH50
Uniprot:Q9LH50
Length = 222
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 59/191 (30%), Positives = 106/191 (55%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +++ GDS VGKT + F +N+F + K T+GV+F TK L + VK QIWD A
Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLV---IDNKTVKAQIWDTA 72
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+T R+SF+ + +W +L D ++ +L+ +
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHA--DKNIVI--MLIGN 128
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS-MNFLVD--RIICSKRM-- 414
KCDL R V + + + N ++E S+ E +E + + L + RII K +
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLF-FMETSALEATNVETAFLTILTEIYRIISKKSLTA 187
Query: 415 EEEAVERKSSI 425
+++ + SS+
Sbjct: 188 DDDDADGNSSL 198
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 160 YGTFSPIQTPSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGG 219
YG ++ + +++ GDS VGKT + F +N+F + K T+GV+F TK L
Sbjct: 5 YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLV---IDN 61
Query: 220 RPVKLQIWD 228
+ VK QIWD
Sbjct: 62 KTVKAQIWD 70
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 53/171 (30%), Positives = 101/171 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD A
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVE---GKKIKLQVWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNG-AMLPCLLLA 359
GQ+R+ ++ YY+ + G I+++D+T+ KSFE++ W K I +N A + LLL
Sbjct: 66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-----KSIKENASAGVERLLLG 120
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRII 409
+KCD+ R+V+ + + ++ + + E S+K ++++ + L I+
Sbjct: 121 NKCDMEAKRKVQKEQAIKLAREHG-IRFFETSAKSSTNVDEAFSSLARDIL 170
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F ++ F + Y +T+G+DF + + + G+ +KLQ+WD
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVE---GKKIKLQVWD 63
>ZFIN|ZDB-GENE-040718-2 [details] [associations]
symbol:rab15 "RAB15, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:BX255891 EMBL:BC075754 IPI:IPI00489491
RefSeq:NP_001002318.1 UniGene:Dr.84043 Ensembl:ENSDART00000049462
GeneID:436590 KEGG:dre:436590 InParanoid:Q6DI36 NextBio:20831039
Uniprot:Q6DI36
Length = 212
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 59/213 (27%), Positives = 113/213 (53%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K L + G V++QIWD A
Sbjct: 9 FRLLLLGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTL---EIDGIKVRIQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY +++ YY+ + G +++D+T+ +SF+ +++W D+D + +L+ +
Sbjct: 66 GQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVDEYA----PEKVQKILVGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D + RQV + + + Y M + E S+ + I +S L + ++ + + + + +
Sbjct: 122 KSDEQEKRQVATEQGDKLAKAYG-MDFFETSAFTNHNITESFTRLAELVLQANKKDLDLL 180
Query: 420 ERKSSIRLSEETLRDDQPKKLVPADKVSTYCWC 452
+ L+ L + + V +D CWC
Sbjct: 181 GGSLNDELNLADLEEQEGLCNV-SDDTRKSCWC 212
Score = 111 (44.1 bits), Expect = 0.00066, P = 0.00066
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS VGKT + F N+F ++ +T+GVDF K L + G V++QIWD
Sbjct: 9 FRLLLLGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTL---EIDGIKVRIQIWD 63
>RGD|619740 [details] [associations]
symbol:Rab9a "RAB9A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA;ISO;ISS;TAS] [GO:0005525 "GTP binding"
evidence=IEA;ISO;ISS;TAS] [GO:0005764 "lysosome" evidence=IEA;ISO]
[GO:0005770 "late endosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA;ISO;ISS]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone
resorption" evidence=TAS] [GO:0045921 "positive regulation of
exocytosis" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 52/180 (28%), Positives = 95/180 (52%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD VGK+S + +V NKF +T+GV+F K L + G V +QIWD A
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDL---EVDGHFVTMQIWDTA 64
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ + +Y+ SD C++ F + + +SF+++ WK + + P ++L +
Sbjct: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 124
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
K D+ +RQV E +A C + E S+K+ + + V RI+ ++ + ++
Sbjct: 125 KTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQ 184
>UNIPROTKB|Q99P75 [details] [associations]
symbol:Rab9a "Ras-related protein Rab-9A" species:10116
"Rattus norvegicus" [GO:0005764 "lysosome" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 52/180 (28%), Positives = 95/180 (52%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GD VGK+S + +V NKF +T+GV+F K L + G V +QIWD A
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDL---EVDGHFVTMQIWDTA 64
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ + +Y+ SD C++ F + + +SF+++ WK + + P ++L +
Sbjct: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 124
Query: 361 KCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVE 420
K D+ +RQV E +A C + E S+K+ + + V RI+ ++ + ++
Sbjct: 125 KTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQ 184
>WB|WBGene00004277 [details] [associations]
symbol:rab-18 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264 GO:GO:0015031
GO:GO:0042127 GO:GO:0007281 PROSITE:PS51419 GO:GO:0040020
eggNOG:COG1100 InterPro:IPR025662 GO:GO:0040022
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07910
EMBL:FO080242 RefSeq:NP_741092.1 RefSeq:NP_741093.2
ProteinModelPortal:Q8MXS1 SMR:Q8MXS1 PaxDb:Q8MXS1 PRIDE:Q8MXS1
EnsemblMetazoa:Y92C3B.3b GeneID:175272 KEGG:cel:CELE_Y92C3B.3
UCSC:Y92C3B.3b CTD:175272 WormBase:Y92C3B.3a WormBase:Y92C3B.3b
InParanoid:Q8MXS1 OMA:FAKRHRT NextBio:887480 Uniprot:Q8MXS1
Length = 203
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 62/194 (31%), Positives = 107/194 (55%)
Query: 238 IPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIW 297
+ T ILI G+S VGK+S + FV + F T+GVDF ++ G VKL IW
Sbjct: 9 LTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMA---IDGNRVKLAIW 65
Query: 298 DIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLL 357
D AGQ+R+ ++ YY+ + G I ++D+T+R SFE + W ++D+ C DN + ++
Sbjct: 66 DTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDN---IIKMM 122
Query: 358 LASKCDLPDRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEE 417
+A+K D+P+R V E ++ + +IE S+K ++ + L+++II + + +
Sbjct: 123 VANKIDMPNRVVTREEGLKFAKRHRTL-FIEASAKTKEGVQCTFEELIEKIIQTPDLWDN 181
Query: 418 AVERKSSIRLSEET 431
+ S RL + T
Sbjct: 182 D---RPSFRLGQPT 192
>ZFIN|ZDB-GENE-060929-1062 [details] [associations]
symbol:zgc:154045 "zgc:154045" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060929-1062 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07890 OrthoDB:EOG4W0XF0 EMBL:BC124522
IPI:IPI00803714 RefSeq:NP_001070133.1 UniGene:Dr.107584
ProteinModelPortal:Q08BX0 SMR:Q08BX0 GeneID:767727 KEGG:dre:767727
InParanoid:Q08BX0 NextBio:20918113 Bgee:Q08BX0 Uniprot:Q08BX0
Length = 216
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 65/209 (31%), Positives = 113/209 (54%)
Query: 240 TYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDI 299
++ +++ G+ VGKTS V + +NKF D + T+ F TK L+ G+ V L IWD
Sbjct: 10 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLN---ITGKRVNLAIWDT 66
Query: 300 AGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLA 359
AGQ+R+ + +YY++S+G I+++D+T+ SF+ V W +L + +L N L C++
Sbjct: 67 AGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKEL--RKMLGNEICL-CIV-G 122
Query: 360 SKCDLP-DRQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEA 418
+K DL +R V + E E + S+K + IE+ L R++ + ++EE +
Sbjct: 123 NKIDLEKERHVSVEEAEGYAESVGAKHY-HTSAKLNKGIEELFLDLCKRMMETAQLEERS 181
Query: 419 ----VERKSSIRLSEETLRDDQPKKLVPA 443
S+ R + + DD+P+ VPA
Sbjct: 182 RGNGASNSSTGRRGVQIV-DDEPQAAVPA 209
>UNIPROTKB|F1NTT5 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=IEA] [GO:0021513 "spinal
cord dorsal/ventral patterning" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0045861 "negative
regulation of proteolysis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045861 GO:GO:0008589
GeneTree:ENSGT00700000104457 OMA:VTEVFKY EMBL:AADN02002690
IPI:IPI00597769 Ensembl:ENSGALT00000026245 Uniprot:F1NTT5
Length = 237
Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 52/191 (27%), Positives = 105/191 (54%)
Query: 243 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIAGQ 302
+++ G+ VGK+S +Q + + F +YK T+GVDF + + + V+L +WD AGQ
Sbjct: 12 VVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQI---QVNDEEVRLMLWDTAGQ 68
Query: 303 DRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLASKC 362
+ + +++ YY+ + C+++F T+R+SF+++ WK K + + G +P +L+ +K
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKE----KVMTEVGD-IPTVLVQNKI 123
Query: 363 DLPDRQ-VEINEIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVER 421
DL D ++ E EA+ + + + S KE L I + +L D+ + +R++++ E
Sbjct: 124 DLLDDSCIKNEEAEALAKKLK-LRFYRASVKEDLNITEVFKYLADKYL--QRLKQQTAEE 180
Query: 422 KSSIRLSEETL 432
+ S +
Sbjct: 181 PELVHTSSNKI 191
Score = 107 (42.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 104 DAETVLKILVIGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDF 145
D E +K++V+G+ VGK+S +Q + + F +YK T+GVDF
Sbjct: 5 DMEVAIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDF 46
Score = 99 (39.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 173 ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+++ G+ VGK+S +Q + + F +YK T+GVDF + + + V+L +WD
Sbjct: 12 VVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQI---QVNDEEVRLMLWD 64
Score = 53 (23.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 388 EVSSKEHLMIEDSMNFLVDRIICSKRMEEEAVERKSSIRLSEETLRDD 435
EV +++++ ++ L D C K E EA+ +K +R ++++D
Sbjct: 110 EVGDIPTVLVQNKIDLLDDS--CIKNEEAEALAKKLKLRFYRASVKED 155
>UNIPROTKB|F5GY21 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B IPI:IPI01013645
ProteinModelPortal:F5GY21 SMR:F5GY21 Ensembl:ENST00000448330
UCSC:uc010uih.2 ArrayExpress:F5GY21 Bgee:F5GY21 Uniprot:F5GY21
Length = 190
Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 51/161 (31%), Positives = 94/161 (58%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIEDS 400
KCD+ D RQV E + Y + ++E S+K +E++
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEN 161
Score = 109 (43.4 bits), Expect = 0.00075, P = 0.00075
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 167 QTPSYL--ILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKL 224
+T YL +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTI---ELDGKKIKL 59
Query: 225 QIWD 228
QIWD
Sbjct: 60 QIWD 63
>UNIPROTKB|J9NWR1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03012309
Ensembl:ENSCAFT00000044078 Uniprot:J9NWR1
Length = 228
Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 51/160 (31%), Positives = 95/160 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIED 399
KCD+ D RQV E + Y + ++E S+K ++ +E+
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVEN 160
>UNIPROTKB|B4DEK7 [details] [associations]
symbol:RAB8A "cDNA FLJ53028, highly similar to Ras-related
protein Rab-8A" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC008894 UniGene:Hs.642874 HGNC:HGNC:7007
EMBL:AK293676 IPI:IPI00909683 ProteinModelPortal:B4DEK7
STRING:B4DEK7 PRIDE:B4DEK7 Ensembl:ENST00000586682 UCSC:uc010xpc.2
Bgee:B4DEK7 Uniprot:B4DEK7
Length = 207
Score = 247 (92.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 51/160 (31%), Positives = 95/160 (59%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F ++ F + +T+G+DF + + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTI---ELDGKRIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSF+++ W +++ D M+ L +
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMI----LGN 121
Query: 361 KCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSKEHLMIED 399
KCD+ D RQV E + Y + ++E S+K ++ +E+
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVEN 160
>TAIR|locus:2042321 [details] [associations]
symbol:RAB6A species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISM;IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0032940 "secretion by cell" evidence=IGI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0007264
GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0032940
GO:GO:0016192 GO:GO:0015031 GO:GO:0005768 EMBL:AC003672
GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07893 OMA:TTKWIED HSSP:P20340 EMBL:BT025780 EMBL:AK226988
EMBL:AY087904 IPI:IPI00530291 PIR:T01588 RefSeq:NP_181989.1
UniGene:At.24965 ProteinModelPortal:O80501 SMR:O80501 STRING:O80501
PaxDb:O80501 PRIDE:O80501 EnsemblPlants:AT2G44610.1 GeneID:819069
KEGG:ath:AT2G44610 TAIR:At2g44610 InParanoid:O80501
PhylomeDB:O80501 ProtClustDB:CLSN2683217 Genevestigator:O80501
Uniprot:O80501
Length = 208
Score = 246 (91.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 55/162 (33%), Positives = 99/162 (61%)
Query: 233 LSPIQ-IPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRP 291
++P+ + Y ++ GD +VGKTS + F+ +KF + Y+ T+G+DF +K + + R
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED---RT 57
Query: 292 VKLQIWDIAGQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGA 351
V+LQ+WD AGQ+R+ + Y ++S +I++D+ +R+SF + +W ++ + + G+
Sbjct: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRT----ERGS 113
Query: 352 MLPCLLLASKCDLPD-RQVEINEIEAVCHQYNFMSWIEVSSK 392
+ +L+ +K DL D RQV I E EA + N M +IE S+K
Sbjct: 114 DVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVM-FIETSAK 154
Score = 126 (49.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 164 SPIQT-PSYLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPV 222
+P+ Y ++ GD +VGKTS + F+ +KF + Y+ T+G+DF +K + + R V
Sbjct: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED---RTV 58
Query: 223 KLQIWDI-----YCTLSPIQIPTYPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDF 277
+LQ+WD + +L P I + + + S++ K++D + G D
Sbjct: 59 RLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLN---TTKWIDEVRTERGSDV 115
Query: 278 STKLLSHK 285
L+ +K
Sbjct: 116 IVVLVGNK 123
>TAIR|locus:2081486 [details] [associations]
symbol:ATFP8 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030742
"GTP-dependent protein binding" evidence=IPI] [GO:0080115 "myosin
XI tail binding" evidence=IPI] [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100
EMBL:AC016795 KO:K07976 HOGENOM:HOG000233968 HSSP:P62820
OMA:AKDFADS EMBL:U64911 EMBL:AK118150 EMBL:BT005576 IPI:IPI00547722
RefSeq:NP_187779.1 UniGene:At.18731 ProteinModelPortal:Q9ZRE2
SMR:Q9ZRE2 IntAct:Q9ZRE2 STRING:Q9ZRE2 PaxDb:Q9ZRE2 PRIDE:Q9ZRE2
EnsemblPlants:AT3G11730.1 GeneID:820345 KEGG:ath:AT3G11730
TAIR:At3g11730 InParanoid:Q9ZRE2 PhylomeDB:Q9ZRE2
ProtClustDB:CLSN2684436 Genevestigator:Q9ZRE2 Uniprot:Q9ZRE2
Length = 205
Score = 246 (91.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 56/185 (30%), Positives = 105/185 (56%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS+VGK+ + F + ++D+Y +T+GVDF + + G+ +KLQIWD A
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQD---GKTIKLQIWDTA 65
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G II++D T +SF +V QW ++D N ++ LL+ +
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYA---NESVCK-LLIGN 121
Query: 361 KCDLPDRQVEINEI-EAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K D+ + +V E A+ + + ++E S+K+ + +E + + I K+M +
Sbjct: 122 KNDMVESKVVSTETGRALADELG-IPFLETSAKDSINVEQAFLTIAGEI--KKKMGSQTN 178
Query: 420 ERKSS 424
K+S
Sbjct: 179 ANKTS 183
Score = 122 (48.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 171 YLILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWD 228
+ +L+ GDS+VGK+ + F + ++D+Y +T+GVDF + + G+ +KLQIWD
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQD---GKTIKLQIWD 63
>GENEDB_PFALCIPARUM|PF13_0119 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 246 (91.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 56/188 (29%), Positives = 114/188 (60%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ I++ GDS VGK++ + F +++F K+T+GV+F+TK + K + +K QIWD A
Sbjct: 12 FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN--NKIIKAQIWDTA 69
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+RY ++ YY+ + G ++++D+T + SFE++ +W +L D+ ++ LL+ +
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNA--DSNIVI--LLVGN 125
Query: 361 KCDLPDRQVEINEIEAVCH-QYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEEEAV 419
K DL +V IN+ +A + + +++IE S+ E +E + + L++ I + R +++A
Sbjct: 126 KSDLKHLRV-INDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIY-NVRQKKQAT 183
Query: 420 ERKSSIRL 427
+ ++ +
Sbjct: 184 KNDDNLSI 191
>UNIPROTKB|Q5ZIT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0097051 "establishment of protein
localization to endoplasmic reticulum membrane" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0032593
"insulin-responsive compartment" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0000145 "exocyst" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0045200
"establishment of neuroblast polarity" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 EMBL:AJ720699
IPI:IPI00593138 RefSeq:NP_001026268.1 UniGene:Gga.2486 HSSP:P55258
ProteinModelPortal:Q5ZIT5 SMR:Q5ZIT5 PRIDE:Q5ZIT5 GeneID:421994
KEGG:gga:421994 CTD:10890 InParanoid:Q5ZIT5 KO:K07903
NextBio:20824687 Uniprot:Q5ZIT5
Length = 200
Score = 246 (91.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 55/177 (31%), Positives = 102/177 (57%)
Query: 241 YPILITGDSTVGKTSYVQGFVQNKFLDNYKNTVGVDFSTKLLSHKKYGGRPVKLQIWDIA 300
+ +L+ GDS VGKT + F + F + +T+G+D K + + G+ +KLQIWD A
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQ---GKKIKLQIWDTA 66
Query: 301 GQDRYICMSRVYYQNSDGCIIMFDLTNRKSFESVVQWKHDLDSKCILDNGAMLPCLLLAS 360
GQ+R+ ++ YY+ + G ++++D+TN KSFE++ +W ++D D ML L +
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERML----LGN 122
Query: 361 KCDLPDRQVEIN-EIEAVCHQYNFMSWIEVSSKEHLMIEDSMNFLVDRIICSKRMEE 416
KCD+ D++V + E + ++ + + E S+K ++ IE + L + I+ ++E
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
WARNING: HSPs involving 1452 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 452 435 0.00087 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1702
No. of states in DFA: 613 (65 KB)
Total size of DFA: 274 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.20u 0.09s 37.29t Elapsed: 00:00:03
Total cpu time: 37.26u 0.10s 37.36t Elapsed: 00:00:03
Start: Thu Aug 15 11:12:51 2013 End: Thu Aug 15 11:12:54 2013
WARNINGS ISSUED: 2