BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14772
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RA23|NFYC_PONAB Nuclear transcription factor Y subunit gamma OS=Pongo abelii
GN=NFYC PE=2 SV=1
Length = 335
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + Q LPLARIKKIMKLD+ VKMISAEAP+LF+KAA++FI ELT+RAWIHTEDNKRRTL
Sbjct: 37 DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTL 96
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRRDDATKTALNPDQVQYYFQLAQQHQ 138
QRNDIAMAITK+D FDFLIDIVPR+E+K P R++D ++ + VQYYF LAQQ
Sbjct: 97 QRNDIAMAITKFDQFDFLIDIVPRDELKP---PKRQEDVRQSVTPAEPVQYYFTLAQQPA 153
Query: 139 A 139
A
Sbjct: 154 A 154
>sp|Q13952|NFYC_HUMAN Nuclear transcription factor Y subunit gamma OS=Homo sapiens
GN=NFYC PE=1 SV=3
Length = 458
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 101/122 (82%), Gaps = 5/122 (4%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + Q LPLARIKKIMKLD+ VKMISAEAP+LF+KAA++FI ELT+RAWIHTEDNKRRTL
Sbjct: 37 DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTL 96
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRRDDATKTALNP-DQVQYYFQLAQQH 137
QRNDIAMAITK+D FDFLIDIVPR+E+K P +R + + ++ P + VQYYF LAQQ
Sbjct: 97 QRNDIAMAITKFDQFDFLIDIVPRDELK----PPKRQEEVRQSVTPAEPVQYYFTLAQQP 152
Query: 138 QA 139
A
Sbjct: 153 TA 154
>sp|Q62725|NFYC_RAT Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus
GN=Nfyc PE=2 SV=1
Length = 335
Score = 177 bits (448), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 101/122 (82%), Gaps = 5/122 (4%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + Q LPLARIKKIMKLD+ VKMISAEAP+LF+KAA++FI ELT+RAWIHTEDNKRRTL
Sbjct: 37 DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTL 96
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRRDDATKTALNP-DQVQYYFQLAQQH 137
QRNDIAMAITK+D FDFLIDIVPR+E+K P +R + + ++ P + VQYYF LAQQ
Sbjct: 97 QRNDIAMAITKFDQFDFLIDIVPRDELK----PPKRQEEVRQSVTPAEPVQYYFTLAQQP 152
Query: 138 QA 139
A
Sbjct: 153 TA 154
>sp|P70353|NFYC_MOUSE Nuclear transcription factor Y subunit gamma OS=Mus musculus
GN=Nfyc PE=2 SV=2
Length = 335
Score = 177 bits (448), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 101/122 (82%), Gaps = 5/122 (4%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + Q LPLARIKKIMKLD+ VKMISAEAP+LF+KAA++FI ELT+RAWIHTEDNKRRTL
Sbjct: 37 DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTL 96
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRRDDATKTALNP-DQVQYYFQLAQQH 137
QRNDIAMAITK+D FDFLIDIVPR+E+K P +R + + ++ P + VQYYF LAQQ
Sbjct: 97 QRNDIAMAITKFDQFDFLIDIVPRDELK----PPKRQEEVRQSVTPAEPVQYYFTLAQQP 152
Query: 138 QA 139
A
Sbjct: 153 TA 154
>sp|Q5E9X1|NFYC_BOVIN Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC
PE=2 SV=1
Length = 335
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 101/122 (82%), Gaps = 5/122 (4%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + Q LPLARIKKIMKLD+ VKMISAEAP+LF+KAA++FI ELT+RAWIHTEDNKRRTL
Sbjct: 37 DFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTL 96
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRRDDATKTALNP-DQVQYYFQLAQQH 137
QRNDIAMAITK+D FDFLIDIVPR+E+K P +R + + ++ P + VQYYF LAQQ
Sbjct: 97 QRNDIAMAITKFDQFDFLIDIVPRDELK----PPKRQEEVRQSVTPAEPVQYYFTLAQQP 152
Query: 138 QA 139
A
Sbjct: 153 TA 154
>sp|Q9FMV5|NFYC4_ARATH Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana
GN=NFYC4 PE=2 SV=1
Length = 250
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 77/88 (87%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K LPLARIKKIMK D+ V+MISAEAP+LF+KA ELFI ELTIR+W+H E+NKRRTL
Sbjct: 73 DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTL 132
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVK 106
Q+NDIA AIT+ D+FDFL+DIVPREE+K
Sbjct: 133 QKNDIAAAITRTDIFDFLVDIVPREEIK 160
>sp|Q9SMP0|NFYC1_ARATH Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana
GN=NFYC1 PE=1 SV=1
Length = 234
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 77/88 (87%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K LPLARIKKIMK D+ V+MISAEAP+LF+KA ELFI ELTIR+W+H E+NKRRTL
Sbjct: 60 DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTL 119
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVK 106
Q+NDIA AIT+ D+FDFL+DIVPR+E+K
Sbjct: 120 QKNDIAAAITRTDIFDFLVDIVPRDEIK 147
>sp|Q8LCG7|NFYC2_ARATH Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana
GN=NFYC2 PE=2 SV=2
Length = 199
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 78/88 (88%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K LPLARIKKIMK D+ V+MISAEAP++F+KA E+FI ELT+RAWIHTE+NKRRTL
Sbjct: 71 DFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTL 130
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVK 106
Q+NDIA AI++ D+FDFL+DI+PR+E+K
Sbjct: 131 QKNDIAAAISRTDVFDFLVDIIPRDELK 158
>sp|Q9ZVL3|NFYC3_ARATH Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana
GN=NFYC3 PE=2 SV=1
Length = 217
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 78/88 (88%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K +LPLARIKKIMK D+ V+MISAEAP++F++A E+FI ELT+R+W HTE+NKRRTL
Sbjct: 65 DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTL 124
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVK 106
Q+NDIA A+T+ D+FDFL+DIVPRE+++
Sbjct: 125 QKNDIAAAVTRTDIFDFLVDIVPREDLR 152
>sp|Q8L4B2|NFYC9_ARATH Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana
GN=NFYC9 PE=2 SV=1
Length = 231
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 78/88 (88%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K +LPLARIKKIMK D+ V+MISAEAP++F++A E+FI ELT+R+W HTE+NKRRTL
Sbjct: 75 DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTL 134
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREEVK 106
Q+NDIA A+T+ D+FDFL+DIVPRE+++
Sbjct: 135 QKNDIAAAVTRTDIFDFLVDIVPREDLR 162
>sp|Q02516|HAP5_YEAST Transcriptional activator HAP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP5 PE=1 SV=1
Length = 242
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 69/84 (82%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K+ +LP ARI+K+MK D+ VKMISAEAP++F+KA E+FI ELT+RAW E NKRRTL
Sbjct: 154 DFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTL 213
Query: 79 QRNDIAMAITKYDMFDFLIDIVPR 102
Q+ DIA A+ K DMFDFLID+VPR
Sbjct: 214 QKADIAEALQKSDMFDFLIDVVPR 237
>sp|P79007|HAP5_SCHPO Transcriptional activator hap5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap5 PE=2 SV=1
Length = 415
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 78/102 (76%), Gaps = 5/102 (4%)
Query: 7 EHVNRVIQVTELD---LKTQALPLARIKKIMKLDDGVK--MISAEAPMLFSKAAELFIHE 61
E+ + I E D +KT LPLARIKK+MK DD VK MISAEAP LF+K +E+FI E
Sbjct: 88 EYWQKTIDTLEHDDQAVKTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAE 147
Query: 62 LTIRAWIHTEDNKRRTLQRNDIAMAITKYDMFDFLIDIVPRE 103
LT+RAW+H + N+RRTLQR+DIA A++K +M+DFLIDI+ ++
Sbjct: 148 LTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISKD 189
>sp|Q557I1|NFYC_DICDI Nuclear transcription factor Y subunit gamma OS=Dictyostelium
discoideum GN=nfyc-1 PE=3 SV=1
Length = 684
Score = 114 bits (285), Expect = 3e-25, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Query: 11 RVIQVTELDLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHT 70
R I TE D KT LPLARIKKIMK D V IS+EAP+LF+KA E+ I E+T R+W+HT
Sbjct: 258 RDIHKTE-DFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHT 316
Query: 71 EDNKRRTLQRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHRR--DDATKTALNPDQVQ 128
E NKRRTLQR DI ++++ + FDFLID++PR+E+K P R+ D+ +K + +
Sbjct: 317 EMNKRRTLQRTDIINSLSRCETFDFLIDMLPRDEIK----PSRKYLDELSKAQVITPEYL 372
Query: 129 YYFQLAQ 135
Y QL Q
Sbjct: 373 QYLQLQQ 379
>sp|Q9FGP7|NFYC6_ARATH Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana
GN=NFYC6 PE=2 SV=1
Length = 202
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 68/86 (79%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D K + LPLARIKKIMK D V M+SAEAP++F+KA E+FI +LT+R+W+ E+NKR TL
Sbjct: 49 DFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTL 108
Query: 79 QRNDIAMAITKYDMFDFLIDIVPREE 104
Q++DI+ A+ +DFL+D+VP++E
Sbjct: 109 QKSDISNAVASSFTYDFLLDVVPKDE 134
>sp|Q4PSE2|NFYC8_ARATH Nuclear transcription factor Y subunit C-8 OS=Arabidopsis thaliana
GN=NFYC8 PE=2 SV=1
Length = 187
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 18 LDLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRT 77
LD K LP+ RIKKIMK D V MI++EAP+L SKA E+FI +LT+R+W+H +++KR T
Sbjct: 30 LDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVT 89
Query: 78 LQRNDIAMAITKYDMFDFLIDI---VPREEVKTATGP 111
LQ++++ A+ + +FDFL+D V RE V A P
Sbjct: 90 LQKSNVDAAVAQTVIFDFLLDDDIEVKRESVAAAADP 126
>sp|Q9FGP6|NFYC5_ARATH Nuclear transcription factor Y subunit C-5 OS=Arabidopsis thaliana
GN=NFYC5 PE=2 SV=1
Length = 186
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 66/88 (75%)
Query: 17 ELDLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRR 76
+L++K P++RIK+IMK D V MI+AEAP L SKA E+F+ +LT+R+W+H +++ R
Sbjct: 29 DLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRL 88
Query: 77 TLQRNDIAMAITKYDMFDFLIDIVPREE 104
T++++D+ +++ +FDFL D VP++E
Sbjct: 89 TIRKSDVDAVVSQTVIFDFLRDDVPKDE 116
>sp|Q9FGP8|NFYC7_ARATH Nuclear transcription factor Y subunit C-7 OS=Arabidopsis thaliana
GN=NFYC7 PE=2 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D+K A PL RIKKIMK + V M++AEAP+L SKA E+ I +LT+R+W+HT + R+TL
Sbjct: 58 DVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTL 117
Query: 79 Q------RNDIAMAITKYDMFDFLIDIVPRE 103
+ R+DI+ A T+ F FL D+VPR+
Sbjct: 118 KRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
>sp|Q58CM8|NFYCA_ARATH Nuclear transcription factor Y subunit C-10 OS=Arabidopsis thaliana
GN=NFYC10 PE=2 SV=1
Length = 195
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
LPL+R++KI+K D VK IS + P LFSKA E FI E+T+RAW+HT+ R T++R DI
Sbjct: 68 LPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIF 127
Query: 85 MAITKYDMFDFLIDIVPREEVKTATGPH 112
A+ +DFLID VP GPH
Sbjct: 128 QAVKNSGTYDFLIDRVP-------FGPH 148
>sp|Q9CQ36|DPOE4_MOUSE DNA polymerase epsilon subunit 4 OS=Mus musculus GN=Pole4 PE=3 SV=1
Length = 118
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
LPLAR+K ++K D V + EA + ++AAELF+ + A+ + KR+TLQR D+
Sbjct: 42 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLD 101
Query: 85 MAITKYDMFDFL 96
AI D F FL
Sbjct: 102 NAIEAVDEFAFL 113
>sp|Q9NR33|DPOE4_HUMAN DNA polymerase epsilon subunit 4 OS=Homo sapiens GN=POLE4 PE=1 SV=2
Length = 117
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
LPLAR+K ++K D V + EA + ++AAELF+ + A+ + KR+TLQR D+
Sbjct: 41 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLD 100
Query: 85 MAITKYDMFDFL 96
AI D F FL
Sbjct: 101 NAIEAVDEFAFL 112
>sp|A6QQ14|DPOE4_BOVIN DNA polymerase epsilon subunit 4 OS=Bos taurus GN=POLE4 PE=3 SV=1
Length = 116
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
LPLAR+K ++K D V + EA + ++AAELF+ + A+ + KR+TLQR D+
Sbjct: 40 LPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLD 99
Query: 85 MAITKYDMFDFL 96
AI D F FL
Sbjct: 100 NAIEAVDEFAFL 111
>sp|Q54DA1|NC2A_DICDI Dr1-associated corepressor homolog OS=Dictyostelium discoideum
GN=drap1 PE=3 SV=1
Length = 550
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P+ARIKKIM+ D+ V I++ P+L S+ ELF+ +L ++ T+ K + + N +
Sbjct: 9 FPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGKVISVNHLK 68
Query: 85 MAITKYDMFDFLIDIVPR 102
I + FDFL +IV R
Sbjct: 69 ECIKQESTFDFLTEIVDR 86
>sp|Q9NRG0|CHRC1_HUMAN Chromatin accessibility complex protein 1 OS=Homo sapiens GN=CHRAC1
PE=1 SV=1
Length = 131
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 24 ALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDI 83
+LPL+RI+ IMK V I+ EA +L +KA ELF+ L ++ H +++ L +D+
Sbjct: 18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDL 77
Query: 84 AMAITKYDMFDFLIDIVPRE 103
A + + F FL DI+P++
Sbjct: 78 ANTAQQSETFQFLADILPKK 97
>sp|Q14919|NC2A_HUMAN Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3
Length = 205
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P ARIKKIM+ D+ + ++A P++ S+A ELF+ L +A T+ +T+ + +
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71
Query: 85 MAITKYDMFDFLIDIV 100
I FDFL D+V
Sbjct: 72 QCIELEQQFDFLKDLV 87
>sp|A0JPP1|NC2A_RAT Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1
Length = 205
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P ARIKKIM+ D+ + ++A P++ S+A ELF+ L +A T+ +T+ + +
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71
Query: 85 MAITKYDMFDFLIDIV 100
I FDFL D+V
Sbjct: 72 QCIELEQQFDFLKDLV 87
>sp|C6Y4D0|YCGV_SCHPO Putative transcription factor C16C4.22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC16C4.22 PE=3
SV=1
Length = 87
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 24 ALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDI 83
LPL+R+K+I+K D+ V S + +L S A ELF+ +L A+ + KR+ ++ D+
Sbjct: 9 VLPLSRVKRIIKQDEDVHYCSNASALLISVATELFVEKLATEAYQLAKLQKRKGIRYRDV 68
Query: 84 AMAITKYDMFDFLIDI 99
+ K D F+FL D+
Sbjct: 69 EDVVRKDDQFEFLSDL 84
>sp|Q9JKP8|CHRC1_MOUSE Chromatin accessibility complex protein 1 OS=Mus musculus GN=Chrac1
PE=1 SV=1
Length = 129
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
D + +LPL+RI+ IMK V I+ EA +L +KA ELF+ L ++ H ++ L
Sbjct: 13 DQRLVSLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGKAKKAL 72
Query: 79 QRNDIAMAITKYDMFDFLIDIVPRE 103
+D+A + FL DI+P++
Sbjct: 73 TYSDLASTAEDSETLQFLADILPKK 97
>sp|Q2YDP3|NC2A_BOVIN Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1
Length = 205
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P ARIKKIM+ D+ + ++A P++ S+A ELF+ L +A T+ +T+ + +
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71
Query: 85 MAITKYDMFDFLIDIV 100
I FDFL D+V
Sbjct: 72 QCIELEQQFDFLKDLV 87
>sp|Q9D6N5|NC2A_MOUSE Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=2 SV=3
Length = 205
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P ARIKKIM+ D+ + ++A P++ S+A ELF+ L +A T+ +T+ + +
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71
Query: 85 MAITKYDMFDFLIDIV 100
I FDFL D+V
Sbjct: 72 QCIELEQQFDFLKDLV 87
>sp|Q6BX14|DPB3_DEBHA DNA polymerase epsilon subunit C OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DPB3 PE=3 SV=1
Length = 277
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 24 ALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDI 83
+LPL++IKKI K+D S A A ELFI T ++ + + +KR+ LQ D
Sbjct: 91 SLPLSKIKKIFKMDPDYLAASQSAVYATGLATELFIQYFTEQSLVLAKMDKRKKLQYKDF 150
Query: 84 AMAITKYDMFDFLIDIVPR 102
+ A+ D +FL D VP+
Sbjct: 151 SNAVASQDSLNFLSDTVPK 169
>sp|Q10315|DPB3_SCHPO DNA polymerase epsilon subunit C OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dpb3 PE=1 SV=1
Length = 199
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P+ARIKKIM+ D V ++ P++ SKA ELF+ + + T ++ + + + +
Sbjct: 24 FPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSHLK 83
Query: 85 MAITKYDMFDFLIDIV 100
A+ + FDFL DIV
Sbjct: 84 HAVQSVEQFDFLQDIV 99
>sp|Q6C6M5|DPB3_YARLI DNA polymerase epsilon subunit C OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DPB3 PE=3 SV=1
Length = 114
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 19 DLKTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
++KT+ P+ARIKK+M+ DD + ++ P +KA ELF+ L + +
Sbjct: 7 EIKTR-FPVARIKKLMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRV 65
Query: 79 QRNDIAMAITKYDMFDFLIDIVPR--EEVKTATG----PHRR 114
+ + A+ + + FDFL DIV + + V ATG P RR
Sbjct: 66 SPSHLKQAVLETEQFDFLQDIVSKHPDAVAPATGEEEQPKRR 107
>sp|Q6CLM5|DPB3_KLULA DNA polymerase epsilon subunit C OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DPB3 PE=3 SV=1
Length = 166
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFI----HELTIRAWIHTEDNKRRTLQR 80
+P+++ KKI + D + S A + ELFI E A IH + R L
Sbjct: 11 IPISKCKKIARTDPEYILTSQAAFAATAFTTELFIQMLAEETCSLAQIHKQTKTLR-LNY 69
Query: 81 NDIAMAITKYDMFDFLIDIVPREE 104
D++ AI D F FL D+VP+ E
Sbjct: 70 EDLSTAIRNLDKFQFLSDVVPQTE 93
>sp|Q75JQ9|DPOE3_DICDI DNA polymerase epsilon subunit 3 OS=Dictyostelium discoideum
GN=pole3 PE=3 SV=1
Length = 138
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 21 KTQALPLARIKKIMK--LDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTL 78
++Q LP A + +I+K L +GV + + E+ + +KAA+++IH LT + + + R T+
Sbjct: 3 ESQDLPGAIVNRIIKASLPEGV-LCAKESRLAIAKAAKVWIHYLTAASIDFSSHSGRSTI 61
Query: 79 QRNDIAMAITKYDMFDF 95
D+ AI + D +F
Sbjct: 62 SPKDVFQAIEEIDFENF 78
>sp|P27344|DPB3_YEAST DNA polymerase epsilon subunit C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DPB3 PE=1 SV=2
Length = 201
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 21 KTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELT----IRAWIHTEDNKRR 76
K P++++KKI K D + S A + AAELF+ L + A ++++
Sbjct: 8 KAPVFPISKVKKIAKCDPEYVITSNVAISATAFAAELFVQNLVEESLVLAQLNSKGKTSL 67
Query: 77 TLQRNDIAMAITKYDMFDFLIDIVPREEVKTATGPHR 113
L N I + K D F FL D + + + +A R
Sbjct: 68 RLSLNSIEECVEKRDNFRFLEDAIKQLKKNSALDKKR 104
>sp|P40096|NCB1_YEAST Negative cofactor 2 complex subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BUR6 PE=1
SV=1
Length = 142
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 25 LPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIA 84
P A++KKIM+ D+ + +S P++ ++ E FI L ++ + + +
Sbjct: 53 FPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKRITAEILK 112
Query: 85 MAITKYDMFDFLIDIVPREEVKT 107
I + FDFL + + EE +T
Sbjct: 113 KTILNDEKFDFLREGLCVEEGQT 135
>sp|Q9SIT9|NFYB7_ARATH Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana
GN=NFYB7 PE=2 SV=1
Length = 215
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 25 LPLARIKKIMK-LDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDI 83
LP+A + +IMK + G IS +A + FI +T A + KR+T+ +DI
Sbjct: 41 LPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDI 100
Query: 84 AMAITKYDMFDFL 96
AIT D++
Sbjct: 101 IWAITTLGFEDYV 113
>sp|Q8PY39|THIC2_METMA Phosphomethylpyrimidine synthase 2 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=thiC2 PE=3 SV=2
Length = 428
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 90 YDMFDFLIDIVPREEVKTATGPHRRDDATKTALNPDQVQYYF---QLAQQ-HQAALQ 142
Y FD+L++I+ EV +TG R AT A + Q+Q +L Q+ H A LQ
Sbjct: 204 YSQFDYLVEILKEHEVVLSTGNGMRAGATHDATDRAQIQELIINTELGQRAHDAGLQ 260
>sp|P49731|MCM6_SCHPO DNA replication licensing factor mcm6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm6 PE=1 SV=2
Length = 892
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 75 RRTLQRNDIAMA---ITKYDMFDFLID----IVPREEVKTATGPHR-RDDATKTALNPDQ 126
R+T RN+I M+ ++++D+F ++D V R K HR RDDA + + +Q
Sbjct: 592 RKTTLRNNINMSAPIMSRFDLFFVVLDECNESVDRHLAKHIVDIHRLRDDAMQPEFSTEQ 651
Query: 127 VQYYFQLAQQHQAAL 141
+Q Y + A+ + L
Sbjct: 652 LQRYIRYARTFKPKL 666
>sp|Q86XX4|FRAS1_HUMAN Extracellular matrix protein FRAS1 OS=Homo sapiens GN=FRAS1 PE=1 SV=1
Length = 4007
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 35 KLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIAMAITKYDMFD 94
KL G + FS+ + I + +A + N+ + R + A T+ M D
Sbjct: 1185 KLRKGYLFLKISDQQFFSEPQLINIQAFSTQA-PYVLRNEVLHISRGERATITTQ--MLD 1241
Query: 95 FLIDIVPREEVKTATGPHRRDDATKTALNPDQVQYYFQLAQQHQAALQQNNQGATTTSAT 154
D P++ V P +T +P Y FQL + + L + G+ +TS
Sbjct: 1242 IRDDDNPQDVVIEIIDPPLHGQLLQTLQSPATPIYQFQLDELSRGLLHYAHDGSDSTSDV 1301
Query: 155 PTLVVNGGNSGAQ---QIQTIP 173
L N G+S Q++T+P
Sbjct: 1302 AVLQANDGHSFHNILFQVKTVP 1323
>sp|Q6FXJ8|DPB3_CANGA DNA polymerase epsilon subunit C OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DPB3 PE=3 SV=1
Length = 255
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 21 KTQALPLARIKKIMKLDDGVKMISAEAPMLFSKAAELFIHELTIRAWIHTE---DNKRRT 77
+T LP++++K+I K+D + S A + + A ELF+ +A + K+
Sbjct: 18 RTPKLPISKVKRIGKVDPESILTSNMAYVATAFATELFVQSFVEQALFGAQLRRGKKKAG 77
Query: 78 LQRNDIAM--AITKYDMFDFLIDIVPR-EEVKTATGPHR 113
L+ + A+ + D + FL D+V E+ KT++G H+
Sbjct: 78 LRLTNDALVECVRNRDDYIFLEDVVRHIEKPKTSSGLHK 116
>sp|Q7ULJ4|PPK_RHOBA Polyphosphate kinase OS=Rhodopirellula baltica (strain SH1) GN=ppk
PE=3 SV=1
Length = 852
Score = 32.0 bits (71), Expect = 2.5, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 40 VKMISAEAPMLFSKAAELFIHELTIRAWIHTEDNKRRTLQRNDIAMAITKYDMFDFLIDI 99
V+ +A+AP ++ EL E R +D R L+R +AIT ++ +F++
Sbjct: 83 VETAAADAPRFINR--ELAWLEFNARVLDQADDPSVRLLERAKF-LAITSSNLDEFMMVR 139
Query: 100 VPREEVKTATGPHRRDDATKTALNPDQVQYYFQLAQQH 137
V +++ +G RRD + +TA +Q+Q + Q H
Sbjct: 140 VGSLKLQAVSGGGRRDPSGRTA--TEQLQAISKRCQGH 175
>sp|Q67XJ2|NFYBA_ARATH Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana
GN=NFYB10 PE=2 SV=1
Length = 176
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 11 RVIQVTELDLKTQALPLARIKKIMKLDDGVKM---ISAEAPMLFSKAAELFIHELTIRAW 67
R + V E D + LP+A I +IMK G+ + I+ +A + FI +T A
Sbjct: 23 RSLNVREQD---RFLPIANISRIMKR--GLPLNGKIAKDAKETMQECVSEFISFVTSEAS 77
Query: 68 IHTEDNKRRTLQRNDIAMAITKYDMFDFLIDIVP------RE-EVKTATGPHRRDDATKT 120
+ KR+T+ +D+ A+ D+ ID + RE E T + + K
Sbjct: 78 DKCQREKRKTINGDDLLWAMATLGFEDY-IDPLKVYLMRYREMEGDTKGSGKGGESSAKR 136
Query: 121 ALNPDQVQYYFQLAQQ 136
P QV + Q+ QQ
Sbjct: 137 DGQPSQVSQFSQVPQQ 152
>sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170
OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1
Length = 1124
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 27 LARIKKIMKLDDGVKMISAEAPMLFSKAAE---LFIHELTIRAWIHTEDNKRRTLQRNDI 83
L ++ K+M++D ++S E P+ SK +E L++ + + I E +K R L + D+
Sbjct: 321 LGKLSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDL 380
Query: 84 AM 85
++
Sbjct: 381 SI 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,896,207
Number of Sequences: 539616
Number of extensions: 2324974
Number of successful extensions: 6911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6852
Number of HSP's gapped (non-prelim): 62
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)