Your job contains 1 sequence.
>psy14778
MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARGEGEVGGEGG
EDFNENYEYELIGVTVHTGTADGGHYYSFIRDRDKWLLFNDAEVKHFDSSQLAAECFGGE
MTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLMLLPTSWYPSYRIL
IFVKAIGLHEALPLLTRKPLWCPKLNGYST
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14778
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NSF6 - symbol:USP34 "Ubiquitin carboxyl-termi... 360 9.7e-37 2
UNIPROTKB|Q70CQ2 - symbol:USP34 "Ubiquitin carboxyl-termi... 356 2.8e-36 2
UNIPROTKB|F1SQM5 - symbol:LOC100625426 "Ubiquitin carboxy... 354 3.0e-36 2
UNIPROTKB|I3LLU6 - symbol:LOC100625426 "Ubiquitin carboxy... 354 3.0e-36 2
UNIPROTKB|F1PXQ0 - symbol:USP34 "Ubiquitin carboxyl-termi... 355 3.5e-36 2
UNIPROTKB|F1N0A8 - symbol:USP34 "Ubiquitin carboxyl-termi... 355 3.5e-36 2
UNIPROTKB|G3MYZ7 - symbol:USP34 "Ubiquitin carboxyl-termi... 355 3.6e-36 2
UNIPROTKB|F1LYJ4 - symbol:Usp34 "Ubiquitin carboxyl-termi... 354 1.5e-35 2
UNIPROTKB|F1M791 - symbol:Usp34 "Ubiquitin carboxyl-termi... 354 1.6e-35 2
MGI|MGI:109473 - symbol:Usp34 "ubiquitin specific peptida... 354 2.0e-35 2
FB|FBgn0039214 - symbol:CG5794 species:7227 "Drosophila m... 268 2.8e-26 3
ASPGD|ASPL0000005728 - symbol:AN6164 species:162425 "Emer... 151 3.3e-15 2
DICTYBASE|DDB_G0275415 - symbol:DDB_G0275415 "putative ub... 177 2.3e-12 2
UNIPROTKB|F1LSM0 - symbol:Usp24 "Ubiquitin carboxyl-termi... 158 2.1e-10 2
MGI|MGI:1919936 - symbol:Usp24 "ubiquitin specific peptid... 158 2.1e-10 2
UNIPROTKB|I3LGC6 - symbol:USP24 "Ubiquitin carboxyl-termi... 160 5.5e-10 1
UNIPROTKB|E1BND0 - symbol:USP24 "Ubiquitin carboxyl-termi... 159 7.5e-10 1
UNIPROTKB|B7WPF4 - symbol:USP24 "Ubiquitin carboxyl-termi... 158 9.0e-10 1
UNIPROTKB|E2R970 - symbol:USP24 "Ubiquitin carboxyl-termi... 158 9.2e-10 1
UNIPROTKB|Q9UPU5 - symbol:USP24 "Ubiquitin carboxyl-termi... 158 9.6e-10 1
UNIPROTKB|E1BZL0 - symbol:Gga.10597 "Ubiquitin carboxyl-t... 153 3.3e-09 1
ZFIN|ZDB-GENE-060526-139 - symbol:si:ch211-257m21.2 "si:c... 152 4.1e-09 1
UNIPROTKB|F1P910 - symbol:F1P910 "Uncharacterized protein... 143 7.0e-09 1
UNIPROTKB|I3LHI4 - symbol:I3LHI4 "Ubiquitin carboxyl-term... 144 8.8e-09 1
UNIPROTKB|O00507 - symbol:USP9Y "Probable ubiquitin carbo... 146 1.8e-08 1
UNIPROTKB|I3LMY9 - symbol:USP9Y "Ubiquitin carboxyl-termi... 146 1.8e-08 1
UNIPROTKB|F1RX17 - symbol:LOC100517440 "Ubiquitin carboxy... 144 2.0e-08 1
UNIPROTKB|Q93008 - symbol:USP9X "Probable ubiquitin carbo... 144 2.9e-08 1
UNIPROTKB|G5E630 - symbol:LOC790347 "Ubiquitin carboxyl-t... 143 3.7e-08 1
RGD|1560056 - symbol:Usp9x "ubiquitin specific peptidase ... 139 9.8e-08 1
MGI|MGI:894681 - symbol:Usp9x "ubiquitin specific peptida... 139 9.8e-08 1
DICTYBASE|DDB_G0292046 - symbol:DDB_G0292046 "Ubiquitin c... 140 9.9e-08 1
FB|FBgn0005632 - symbol:faf "fat facets" species:7227 "Dr... 135 2.0e-06 1
UNIPROTKB|F1NHA0 - symbol:USP28 "Ubiquitin carboxyl-termi... 117 2.2e-06 2
UNIPROTKB|Q5ZID5 - symbol:USP28 "Ubiquitin carboxyl-termi... 117 2.2e-06 2
UNIPROTKB|E1BWJ5 - symbol:USP9X "Ubiquitin carboxyl-termi... 133 3.8e-06 1
UNIPROTKB|E1BWJ4 - symbol:USP9X "Ubiquitin carboxyl-termi... 133 3.8e-06 1
UNIPROTKB|E1C806 - symbol:USP9X "Ubiquitin carboxyl-termi... 133 3.8e-06 1
UNIPROTKB|I3L8M9 - symbol:USP25 "Ubiquitin carboxyl-termi... 116 1.2e-05 2
UNIPROTKB|F1MP13 - symbol:USP25 "Ubiquitin carboxyl-termi... 116 1.2e-05 2
WB|WBGene00011507 - symbol:T05H10.1 species:6239 "Caenorh... 110 1.2e-05 2
UNIPROTKB|I3LU36 - symbol:USP25 "Ubiquitin carboxyl-termi... 116 1.3e-05 2
ZFIN|ZDB-GENE-061019-1 - symbol:usp9 "ubiquitin specific ... 121 3.2e-05 2
UNIPROTKB|H3BLX5 - symbol:USP48 "Ubiquitin carboxyl-termi... 70 4.7e-05 2
UNIPROTKB|F1NTM5 - symbol:USP25 "Ubiquitin carboxyl-termi... 113 4.9e-05 2
UNIPROTKB|G3V1N5 - symbol:USP28 "Ubiquitin specific pepti... 112 5.1e-05 2
UNIPROTKB|F1NCR4 - symbol:USP25 "Ubiquitin carboxyl-termi... 113 5.2e-05 2
TAIR|locus:2144118 - symbol:UBP12 "ubiquitin-specific pro... 107 6.7e-05 2
UNIPROTKB|B4E3L3 - symbol:USP28 "Ubiquitin carboxyl-termi... 112 8.2e-05 2
TAIR|locus:2081501 - symbol:UBP13 "ubiquitin-specific pro... 107 0.00011 2
FB|FBgn0016756 - symbol:Ubp64E "Ubiquitin-specific protea... 110 0.00011 2
UNIPROTKB|Q96RU2 - symbol:USP28 "Ubiquitin carboxyl-termi... 112 0.00012 2
ZFIN|ZDB-GENE-040426-2847 - symbol:usp25 "ubiquitin speci... 106 0.00014 2
UNIPROTKB|H0YG96 - symbol:USP28 "Ubiquitin carboxyl-termi... 102 0.00014 2
UNIPROTKB|J9P3Q0 - symbol:USP25 "Ubiquitin carboxyl-termi... 108 0.00014 2
UNIPROTKB|E2QW53 - symbol:USP25 "Ubiquitin carboxyl-termi... 108 0.00015 2
UNIPROTKB|J9PA48 - symbol:USP25 "Ubiquitin carboxyl-termi... 108 0.00017 2
UNIPROTKB|Q9UHP3 - symbol:USP25 "Ubiquitin carboxyl-termi... 107 0.00019 2
RGD|1309003 - symbol:Usp25 "ubiquitin specific peptidase ... 107 0.00019 2
UNIPROTKB|H7C253 - symbol:USP25 "Ubiquitin carboxyl-termi... 107 0.00026 1
MGI|MGI:1353655 - symbol:Usp25 "ubiquitin specific peptid... 106 0.00026 2
RGD|1310411 - symbol:Usp47 "ubiquitin specific peptidase ... 93 0.00026 2
UNIPROTKB|E9PT09 - symbol:Usp47 "Ubiquitin carboxyl-termi... 93 0.00027 2
UNIPROTKB|F1LYA3 - symbol:Usp47 "Ubiquitin carboxyl-termi... 93 0.00027 2
MGI|MGI:1922246 - symbol:Usp47 "ubiquitin specific peptid... 93 0.00027 2
UNIPROTKB|E1C1R4 - symbol:USP47 "Ubiquitin carboxyl-termi... 96 0.00030 2
ZFIN|ZDB-GENE-041008-142 - symbol:usp28 "ubiquitin specif... 102 0.00040 2
UNIPROTKB|F1S6W7 - symbol:USP47 "Uncharacterized protein"... 89 0.00080 2
WB|WBGene00011980 - symbol:T24B8.7 species:6239 "Caenorha... 90 0.00095 2
>UNIPROTKB|F1NSF6 [details] [associations]
symbol:USP34 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IEA] [GO:0090263
"positive regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR001394 InterPro:IPR016024
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SUPFAM:SSF48371 GO:GO:0006511 GO:GO:0090263
GO:GO:0071108 GO:GO:0004197 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:ASQYPGA EMBL:AADN02046889
EMBL:AADN02046890 EMBL:AADN02046891 EMBL:AADN02046892
IPI:IPI00595335 Ensembl:ENSGALT00000007092 Uniprot:F1NSF6
Length = 3420
Score = 360 (131.8 bits), Expect = 9.7e-37, Sum P(2) = 9.7e-37
Identities = 77/130 (59%), Positives = 88/130 (67%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM ++ ++E K +
Sbjct: 1959 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKNDRKEGFKEDGEYLKETESYEY 2018
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2019 D---------LIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSTQL 2069
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2070 ASECFGGEMT 2079
Score = 88 (36.0 bits), Expect = 9.7e-37, Sum P(2) = 9.7e-37
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2597 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2641
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 143 PTSSRLVQYFTVLNYFS-MTRNEKLMLL 169
P S L +YF L F+ M E LL
Sbjct: 2304 PHSKHLTEYFAFLYEFAKMGEEESQFLL 2331
>UNIPROTKB|Q70CQ2 [details] [associations]
symbol:USP34 "Ubiquitin carboxyl-terminal hydrolase 34"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IDA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IDA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP]
InterPro:IPR001394 InterPro:IPR016024 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
SUPFAM:SSF48371 GO:GO:0016055 GO:GO:0006511 EMBL:AC016747
GO:GO:0090263 GO:GO:0071108 GO:GO:0004197 GO:GO:0004843
GO:GO:0004221 eggNOG:COG5077 HSSP:P54578 EMBL:AJ586138
EMBL:AB011142 EMBL:AL050092 EMBL:AL831918 EMBL:AK125898
EMBL:AB018272 EMBL:BC022783 EMBL:BC062325 EMBL:BC107761
IPI:IPI00297593 IPI:IPI00787401 IPI:IPI00894492 PIR:T00338
PIR:T13057 RefSeq:NP_055524.3 UniGene:Hs.644708
ProteinModelPortal:Q70CQ2 SMR:Q70CQ2 STRING:Q70CQ2 MEROPS:C19.067
PhosphoSite:Q70CQ2 DMDM:212276488 PaxDb:Q70CQ2 PRIDE:Q70CQ2
Ensembl:ENST00000398571 Ensembl:ENST00000453734 GeneID:9736
KEGG:hsa:9736 UCSC:uc002sbe.3 CTD:9736 GeneCards:GC02M061414
H-InvDB:HIX0002082 H-InvDB:HIX0161884 HGNC:HGNC:20066 HPA:HPA025815
neXtProt:NX_Q70CQ2 PharmGKB:PA134897042 HOVERGEN:HBG092616
InParanoid:Q70CQ2 KO:K11853 OMA:ASQYPGA OrthoDB:EOG47M1WX
ChiTaRS:USP34 GenomeRNAi:9736 NextBio:36636 ArrayExpress:Q70CQ2
Bgee:Q70CQ2 CleanEx:HS_USP34 Genevestigator:Q70CQ2
GermOnline:ENSG00000115464 Uniprot:Q70CQ2
Length = 3546
Score = 356 (130.4 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 77/130 (59%), Positives = 87/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K +
Sbjct: 2089 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSERKEGFKEVS---------DH 2139
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2140 SKDSESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2199
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2200 ASECFGGEMT 2209
Score = 88 (36.0 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2727 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2771
Score = 42 (19.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2402 DDMDTSVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2458
Query: 167 MLL 169
LL
Sbjct: 2459 FLL 2461
>UNIPROTKB|F1SQM5 [details] [associations]
symbol:LOC100625426 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:CU694943 EMBL:CU929839
EMBL:FP312695 Ensembl:ENSSSCT00000009178 Uniprot:F1SQM5
Length = 2974
Score = 354 (129.7 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 77/130 (59%), Positives = 86/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K
Sbjct: 2089 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKEVG---------DH 2139
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2140 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2199
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2200 ASECFGGEMT 2209
Score = 88 (36.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2727 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2771
Score = 42 (19.8 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2402 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2458
Query: 167 MLL 169
LL
Sbjct: 2459 FLL 2461
>UNIPROTKB|I3LLU6 [details] [associations]
symbol:LOC100625426 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00650000093229 OMA:ASQYPGA
EMBL:CU694943 EMBL:CU929839 EMBL:FP312695
Ensembl:ENSSSCT00000028791 Uniprot:I3LLU6
Length = 2989
Score = 354 (129.7 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 77/130 (59%), Positives = 86/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K
Sbjct: 2104 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKEVG---------DH 2154
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2155 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2214
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2215 ASECFGGEMT 2224
Score = 88 (36.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2742 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2786
Score = 42 (19.8 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2417 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2473
Query: 167 MLL 169
LL
Sbjct: 2474 FLL 2476
>UNIPROTKB|F1PXQ0 [details] [associations]
symbol:USP34 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR016024
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SUPFAM:SSF48371 GO:GO:0006511 GO:GO:0090263
GO:GO:0071108 GO:GO:0004197 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:ASQYPGA EMBL:AAEX03007553
EMBL:AAEX03007554 Ensembl:ENSCAFT00000004838 Uniprot:F1PXQ0
Length = 3533
Score = 355 (130.0 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 77/130 (59%), Positives = 87/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K +
Sbjct: 2076 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKEVS---------DH 2126
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2127 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2186
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2187 ASECFGGEMT 2196
Score = 88 (36.0 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2714 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2758
Score = 42 (19.8 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2389 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2445
Query: 167 MLL 169
LL
Sbjct: 2446 FLL 2448
>UNIPROTKB|F1N0A8 [details] [associations]
symbol:USP34 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SUPFAM:SSF48371 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00650000093229
EMBL:DAAA02031375 EMBL:DAAA02031376 EMBL:DAAA02031377
IPI:IPI00700826 Ensembl:ENSBTAT00000007921 Uniprot:F1N0A8
Length = 3548
Score = 355 (130.0 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 77/130 (59%), Positives = 87/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K +
Sbjct: 2091 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKEVS---------DH 2141
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2142 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2201
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2202 ASECFGGEMT 2211
Score = 88 (36.0 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2729 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2773
Score = 42 (19.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2404 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2460
Query: 167 MLL 169
LL
Sbjct: 2461 FLL 2463
>UNIPROTKB|G3MYZ7 [details] [associations]
symbol:USP34 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR016024 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
SUPFAM:SSF48371 GO:GO:0006511 GO:GO:0090263 GO:GO:0071108
GO:GO:0004197 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:ASQYPGA EMBL:DAAA02031375
EMBL:DAAA02031376 EMBL:DAAA02031377 Ensembl:ENSBTAT00000064054
Uniprot:G3MYZ7
Length = 3558
Score = 355 (130.0 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 77/130 (59%), Positives = 87/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K +
Sbjct: 2101 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKEVS---------DH 2151
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2152 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2211
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2212 ASECFGGEMT 2221
Score = 88 (36.0 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV YF+ + Y +++ EKLM
Sbjct: 2739 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYFSFMTYCLISKTEKLM 2783
Score = 42 (19.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2414 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2470
Query: 167 MLL 169
LL
Sbjct: 2471 FLL 2473
>UNIPROTKB|F1LYJ4 [details] [associations]
symbol:Usp34 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1565181 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00650000093229
IPI:IPI00780854 Ensembl:ENSRNOT00000056861 ArrayExpress:F1LYJ4
Uniprot:F1LYJ4
Length = 3228
Score = 354 (129.7 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 77/130 (59%), Positives = 86/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K
Sbjct: 1858 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKDVG---------DH 1908
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 1909 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 1968
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 1969 ASECFGGEMT 1978
Score = 82 (33.9 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV Y + + Y +++ EKLM
Sbjct: 2496 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYLSFMTYCLISKTEKLM 2540
Score = 42 (19.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2171 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2227
Query: 167 MLL 169
LL
Sbjct: 2228 FLL 2230
>UNIPROTKB|F1M791 [details] [associations]
symbol:Usp34 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1565181 GO:GO:0006511
GO:GO:0090263 GO:GO:0071108 GO:GO:0004197 GO:GO:0004843
GO:GO:0004221 GeneTree:ENSGT00650000093229 IPI:IPI00364149
Ensembl:ENSRNOT00000038258 ArrayExpress:F1M791 Uniprot:F1M791
Length = 3311
Score = 354 (129.7 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 77/130 (59%), Positives = 86/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K
Sbjct: 1858 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKDVG---------DH 1908
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 1909 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 1968
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 1969 ASECFGGEMT 1978
Score = 82 (33.9 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV Y + + Y +++ EKLM
Sbjct: 2496 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYLSFMTYCLISKTEKLM 2540
Score = 42 (19.8 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2171 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2227
Query: 167 MLL 169
LL
Sbjct: 2228 FLL 2230
>MGI|MGI:109473 [details] [associations]
symbol:Usp34 "ubiquitin specific peptidase 34" species:10090
"Mus musculus" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISO] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR001394 InterPro:IPR016024 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
MGI:MGI:109473 SUPFAM:SSF48371 GO:GO:0016055 GO:GO:0006511
EMBL:AL672049 GO:GO:0090263 GO:GO:0071108 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 eggNOG:COG5077
GeneTree:ENSGT00650000093229 MEROPS:C19.067 CTD:9736
HOVERGEN:HBG092616 KO:K11853 EMBL:AL672004 EMBL:AL772359
EMBL:AL928722 EMBL:AK033182 EMBL:AK143407 EMBL:AK148805
EMBL:AK129165 EMBL:BC055938 EMBL:BC063062 IPI:IPI00649643
IPI:IPI00668474 IPI:IPI00788320 IPI:IPI00914688
RefSeq:NP_001177330.2 UniGene:Mm.119155 ProteinModelPortal:Q6ZQ93
SMR:Q6ZQ93 STRING:Q6ZQ93 PhosphoSite:Q6ZQ93 PaxDb:Q6ZQ93
PRIDE:Q6ZQ93 Ensembl:ENSMUST00000129368 Ensembl:ENSMUST00000130131
Ensembl:ENSMUST00000180046 GeneID:17847 KEGG:mmu:17847
UCSC:uc007ieu.2 InParanoid:Q6ZQ93 NextBio:292585 Bgee:Q6ZQ93
CleanEx:MM_USP34 Genevestigator:Q6ZQ93
GermOnline:ENSMUSG00000056342 Uniprot:Q6ZQ93
Length = 3582
Score = 354 (129.7 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 77/130 (59%), Positives = 86/130 (66%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTM+KEKVNTHFSFP+RLDM+ Y E LM + ++E K
Sbjct: 2126 MRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKDVG---------DR 2176
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--------RDKWLLFNDAEVKHFDSSQL 112
LIGVTVHTGTADGGHYYSFIRD +KW LFNDAEVK FDS+QL
Sbjct: 2177 SKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQL 2236
Query: 113 AAECFGGEMT 122
A+ECFGGEMT
Sbjct: 2237 ASECFGGEMT 2246
Score = 82 (33.9 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V N L LLS A Y+DA +++LV Y + + Y +++ EKLM
Sbjct: 2764 VYNVLLGLLSRAKLYVDAAVHGTTKLVPYLSFMTYCLISKTEKLM 2808
Score = 42 (19.8 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 18/63 (28%), Positives = 22/63 (34%)
Query: 108 DSSQLAAECFGGEMTVLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFS-MTRNEKL 166
D + E GG V LL + P S L +YF L F+ M E
Sbjct: 2439 DDMDASVEDIGGRSCVTRFVRTLLLIMEHGVK---PHSKHLTEYFAFLYEFAKMGEEESQ 2495
Query: 167 MLL 169
LL
Sbjct: 2496 FLL 2498
>FB|FBgn0039214 [details] [associations]
symbol:CG5794 species:7227 "Drosophila melanogaster"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0060968 "regulation of gene silencing"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GO:GO:0060968 HSSP:Q93009 GeneTree:ENSGT00650000093229 KO:K11853
MEROPS:C19.A46 GeneID:42935 KEGG:dme:Dmel_CG5794 UCSC:CG5794-RB
FlyBase:FBgn0039214 GenomeRNAi:42935 NextBio:831361
RefSeq:NP_651275.1 ProteinModelPortal:Q9VC56 SMR:Q9VC56
EnsemblMetazoa:FBtr0084668 InParanoid:Q9VC56 PhylomeDB:Q9VC56
ArrayExpress:Q9VC56 Bgee:Q9VC56 Uniprot:Q9VC56
Length = 3912
Score = 268 (99.4 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 57/106 (53%), Positives = 66/106 (62%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MRYTFNMVTMLKEKVNTHFSFP+RL+M YVEK LMPQ Y+EE+ + +
Sbjct: 2210 MRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERERRQKEKEGADGSGDG 2269
Query: 61 XXXXXXXXXX-----------LIGVTVHTGTADGGHYYSFIRDRDK 95
L+GVTVHTGTADGGHYYSFI++R K
Sbjct: 2270 NDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGHYYSFIKERTK 2315
Score = 229 (85.7 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 54/111 (48%), Positives = 68/111 (61%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDRDK--------WLLFNDAEVKHFDSSQLAAECFGGEMT 122
L+GVTVHTGTADGGHYYSFI++R K W LFNDAEVK FD SQ+AAECFGGEMT
Sbjct: 2291 LVGVTVHTGTADGGHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMT 2350
Query: 123 VLNACLKLLSTAPQYIDAT--PPTSSRLVQYFTVLNYFSMTRNEKLMLLPT 171
S +Y+D + S+ ++ Y L R+ +L++ PT
Sbjct: 2351 SKTYD----SVTEKYLDFSFEKTNSAYMLFYERRLPEHLQRRHSELLVTPT 2397
Score = 73 (30.8 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 123 VLNACLKLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLM 167
V+ L+LL A Y D +++L YF +L+Y +++ EKLM
Sbjct: 3005 VITLLLRLLRPARVYADIGAHGTTKLTAYFNLLSYCMVSKTEKLM 3049
Score = 37 (18.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 88 SFIRDRDKWLLFNDAEV--KHFDSSQLAAECFGGEMT 122
+FI ++K + E+ K F++SQ A E F M+
Sbjct: 2602 TFIHAKEKPTMVPWVELLTKQFNASQEACEWFLSHMS 2638
Score = 35 (17.4 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 148 LVQYFTVLNYFSMTRNEKLMLL 169
L +YF +L FS +E+ M L
Sbjct: 2720 LSEYFGLLCEFSRMGDEEAMYL 2741
>ASPGD|ASPL0000005728 [details] [associations]
symbol:AN6164 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
PROSITE:PS50235 EMBL:BN001301 GO:GO:0006511 GO:GO:0004221
EMBL:AACD01000105 eggNOG:COG5077 OrthoDB:EOG4HDX2M
RefSeq:XP_663768.1 ProteinModelPortal:Q5AZW6
EnsemblFungi:CADANIAT00006846 GeneID:2871139 KEGG:ani:AN6164.2
HOGENOM:HOG000213962 OMA:WVEFNDS InterPro:IPR021905 Pfam:PF12030
Uniprot:Q5AZW6
Length = 2510
Score = 151 (58.2 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDRDK------WLLFNDAEVKHFDSSQLAAECFGG 119
L+GV VH+GTA+ GHYYS+IR+R W+ FND++V FD ++ +CFGG
Sbjct: 1815 LVGVLVHSGTAESGHYYSYIRERPTANGRGTWVEFNDSDVTRFDPGRIGEQCFGG 1869
Score = 89 (36.4 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHL 35
R+ F+MVTM++ K+N F FP R+DM+ + +L
Sbjct: 1768 RFDFDMVTMMRSKINDEFHFPERIDMTPFTVDYL 1801
>DICTYBASE|DDB_G0275415 [details] [associations]
symbol:DDB_G0275415 "putative ubiquitin
carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR000626 InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 SMART:SM00213
dictyBase:DDB_G0275415 SUPFAM:SSF48371 GO:GO:0008234
EMBL:AAFI02000013 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0004221 eggNOG:COG5077 KO:K11853 RefSeq:XP_643687.1
ProteinModelPortal:Q553T4 EnsemblProtists:DDB0234113 GeneID:8619954
KEGG:ddi:DDB_G0275415 InParanoid:Q553T4 OMA:NNAYMLF Uniprot:Q553T4
Length = 2991
Score = 177 (67.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXX 61
R+ F++ M + K+N FPM +DM Y +++L ++E ++
Sbjct: 1589 RFEFDLDLMKRTKLNDALRFPMTIDMEPYTKEYLE----RKEAIEKAKEKGEPIPEVAPL 1644
Query: 62 XXXXXXXXXLIGVTVHTGTADGGHYYSFIRDRD--------KWLLFNDAEVKHFDSSQLA 113
L G+ VHTGTAD GHYYS+I++R+ +W+LFND + F+ ++
Sbjct: 1645 HPPSYYQYELAGILVHTGTADSGHYYSYIKEREPICEGQPRRWILFNDQATEVFNPDDIS 1704
Query: 114 AECFGG 119
CFGG
Sbjct: 1705 KACFGG 1710
Score = 37 (18.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 18/79 (22%), Positives = 31/79 (39%)
Query: 112 LAAECFGGEMTVLNACL-KLLSTAPQYIDATPPTSSRLVQYFTVLNYFSMTRNEKLMLLP 170
L EC GE + L KLL + + TP + L+ +F F L ++
Sbjct: 2496 LLCEC--GEYQDIAVFLFKLL----ELVSRTPKHAQSLISHFLGFPNFFFYPAHSLKVMD 2549
Query: 171 TSWYPSYRILIFVKAIGLH 189
+ + FV + G++
Sbjct: 2550 ILTFSKKEAICFVNSQGIN 2568
>UNIPROTKB|F1LSM0 [details] [associations]
symbol:Usp24 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
PROSITE:PS50030 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 IPI:IPI00957827 PRIDE:F1LSM0
Ensembl:ENSRNOT00000029228 RGD:1306799 ArrayExpress:F1LSM0
Uniprot:F1LSM0
Length = 2616
Score = 158 (60.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1882 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVAGMARQDSSSEVGENGRNMDQGGGGSPR 1941
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1942 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 2001
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 2002 YECFGGE 2008
Score = 36 (17.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 124 LNACLKLLSTAPQYIDATPPTSSR-LVQYFTVLNYF 158
L + +LL +D P + + QYF++ N F
Sbjct: 2252 LKSLHQLLEVLLALLDKDVPENCKNCAQYFSLFNTF 2287
>MGI|MGI:1919936 [details] [associations]
symbol:Usp24 "ubiquitin specific peptidase 24" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1919936 GO:GO:0008234
InterPro:IPR015940 PROSITE:PS50030 GO:GO:0006511 SUPFAM:SSF46934
GO:GO:0004221 EMBL:AL954352 eggNOG:COG5077
GeneTree:ENSGT00650000093229 KO:K11840 CTD:23358
HOGENOM:HOG000068011 HOVERGEN:HBG105784 OrthoDB:EOG4T782B
ChiTaRS:USP24 EMBL:AK045043 EMBL:AL840623 EMBL:BC029165
IPI:IPI00123410 IPI:IPI00752867 RefSeq:NP_899048.2
UniGene:Mm.234544 ProteinModelPortal:B1AY13 SMR:B1AY13
PhosphoSite:B1AY13 PaxDb:B1AY13 PRIDE:B1AY13 DNASU:329908
Ensembl:ENSMUST00000094933 Ensembl:ENSMUST00000106798 GeneID:329908
KEGG:mmu:329908 UCSC:uc008tyf.2 UCSC:uc008tyh.2 InParanoid:B1AY13
NextBio:399031 Bgee:B1AY13 Genevestigator:B1AY13 Uniprot:B1AY13
Length = 2617
Score = 158 (60.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1883 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVAGMARQDSSSEVGENGRNMDQGGGGSPR 1942
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1943 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 2002
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 2003 YECFGGE 2009
Score = 36 (17.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 124 LNACLKLLSTAPQYIDATPPTSSR-LVQYFTVLNYF 158
L + +LL +D P + + QYF++ N F
Sbjct: 2253 LKSLHQLLEVLLALLDKDVPENCKNCAQYFSLFNTF 2288
>UNIPROTKB|I3LGC6 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:AIKRSYI EMBL:FP565775
EMBL:FP578984 Ensembl:ENSSSCT00000024705 Uniprot:I3LGC6
Length = 2440
Score = 160 (61.4 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1706 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSTDQGGGGSPR 1765
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1766 KKVALTENYELVGVVVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 1825
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 1826 YECFGGE 1832
>UNIPROTKB|E1BND0 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
PROSITE:PS50030 GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 CTD:23358 OMA:AIKRSYI
EMBL:DAAA02008817 EMBL:DAAA02008818 EMBL:DAAA02008819
EMBL:DAAA02008820 IPI:IPI00924167 RefSeq:XP_002686434.1
RefSeq:XP_002704027.1 Ensembl:ENSBTAT00000061043 GeneID:532257
KEGG:bta:532257 NextBio:20875646 Uniprot:E1BND0
Length = 2617
Score = 159 (61.0 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1883 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSTDQGGGGSPR 1942
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1943 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 2002
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 2003 YECFGGE 2009
>UNIPROTKB|B7WPF4 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940 PROSITE:PS50030
GO:GO:0006511 GO:GO:0004221 EMBL:AC091609 HGNC:HGNC:12623
HOGENOM:HOG000068011 HOVERGEN:HBG105784 ChiTaRS:USP24
IPI:IPI00914628 ProteinModelPortal:B7WPF4 STRING:B7WPF4
PRIDE:B7WPF4 Ensembl:ENST00000407756 UCSC:uc001cyg.4
ArrayExpress:B7WPF4 Bgee:B7WPF4 Uniprot:B7WPF4
Length = 2460
Score = 158 (60.7 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1726 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSVDQGGGGSPR 1785
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1786 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 1845
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 1846 YECFGGE 1852
>UNIPROTKB|E2R970 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:AIKRSYI EMBL:AAEX03003806
EMBL:AAEX03003807 Ensembl:ENSCAFT00000030140 Uniprot:E2R970
Length = 2517
Score = 158 (60.7 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1783 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSMDQGGGGSPR 1842
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1843 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 1902
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 1903 YECFGGE 1909
>UNIPROTKB|Q9UPU5 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase 24"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR016024 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
SUPFAM:SSF48371 GO:GO:0008234 InterPro:IPR015940 PROSITE:PS50030
GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221 eggNOG:COG5077
KO:K11840 EMBL:AC091609 EMBL:AK000321 EMBL:AK127075 EMBL:AB028980
EMBL:BC029660 IPI:IPI00902614 RefSeq:NP_056121.2 UniGene:Hs.477009
ProteinModelPortal:Q9UPU5 SMR:Q9UPU5 IntAct:Q9UPU5 STRING:Q9UPU5
MEROPS:C19.047 PhosphoSite:Q9UPU5 DMDM:212276491 PaxDb:Q9UPU5
PRIDE:Q9UPU5 Ensembl:ENST00000294383 GeneID:23358 KEGG:hsa:23358
UCSC:uc021onw.1 CTD:23358 GeneCards:GC01M055536 H-InvDB:HIX0000626
HGNC:HGNC:12623 HPA:HPA026723 HPA:HPA028428 MIM:610569
neXtProt:NX_Q9UPU5 PharmGKB:PA37248 HOGENOM:HOG000068011
HOVERGEN:HBG105784 InParanoid:Q9UPU5 OMA:AIKRSYI OrthoDB:EOG4T782B
ChiTaRS:USP24 GenomeRNAi:23358 NextBio:45380 ArrayExpress:Q9UPU5
Bgee:Q9UPU5 CleanEx:HS_USP24 Genevestigator:Q9UPU5
GermOnline:ENSG00000162402 Uniprot:Q9UPU5
Length = 2620
Score = 158 (60.7 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E ++
Sbjct: 1886 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSVDQGGGGSPR 1945
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND ++ FD + L
Sbjct: 1946 KKVALTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 2005
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 2006 YECFGGE 2012
>UNIPROTKB|E1BZL0 [details] [associations]
symbol:Gga.10597 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:AIKRSYI EMBL:AADN02012533
EMBL:AADN02012534 EMBL:AADN02012535 EMBL:AADN02012536
IPI:IPI00810957 Ensembl:ENSGALT00000017568 ArrayExpress:E1BZL0
Uniprot:E1BZL0
Length = 2612
Score = 153 (58.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 41/127 (32%), Positives = 54/127 (42%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q E +
Sbjct: 1878 MRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGDNGRNVDQGGGGSPR 1937
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR KW FND V+ F+ + L
Sbjct: 1938 KKVAPTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVVEEFELTDETLE 1997
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 1998 YECFGGE 2004
>ZFIN|ZDB-GENE-060526-139 [details] [associations]
symbol:si:ch211-257m21.2 "si:ch211-257m21.2"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-060526-139
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0004221 GeneTree:ENSGT00650000093229 EMBL:CABZ01065961
EMBL:BX897740 EMBL:CABZ01065962 EMBL:CABZ01065963 EMBL:CABZ01065964
IPI:IPI00805832 Ensembl:ENSDART00000083890 ArrayExpress:F1Q6K1
Bgee:F1Q6K1 Uniprot:F1Q6K1
Length = 2589
Score = 152 (58.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 40/127 (31%), Positives = 55/127 (43%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXX 60
MR+ F+ + K + FP L+M Y + Q + ++
Sbjct: 1858 MRFGFDWESGRSIKYDEQIRFPWVLNMEPYTVSGMARQDSSADHGENGRGGEAGSGGSPR 1917
Query: 61 XXXXXXXXXXLIGVTVHTGTADGGHYYSFIRDR-----DKWLLFNDAEVKHFDSSQ--LA 113
L+GV VH+G A GHYYSFI+DR +W FND V+ FD + L
Sbjct: 1918 KKVTISENYELVGVVVHSGQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLE 1977
Query: 114 AECFGGE 120
ECFGGE
Sbjct: 1978 YECFGGE 1984
>UNIPROTKB|F1P910 [details] [associations]
symbol:F1P910 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00650000093229
EMBL:AAEX03026295 Ensembl:ENSCAFT00000022615 Uniprot:F1P910
Length = 646
Score = 143 (55.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 103 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNPESQLIQQNEQSESETAGSTKYR-LVG 159
Query: 74 VTVHTGTADGGHYYSFI--R-----DRDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFGGE
Sbjct: 160 VLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 216
>UNIPROTKB|I3LHI4 [details] [associations]
symbol:I3LHI4 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 Ensembl:ENSSSCT00000026503
Uniprot:I3LHI4
Length = 915
Score = 144 (55.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 628 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNQESQLIKQNEQSDSETAGSTKYR-LVG 684
Query: 74 VTVHTGTADGGHYYSFI--R-----DRDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFGGE
Sbjct: 685 VLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 741
>UNIPROTKB|O00507 [details] [associations]
symbol:USP9Y "Probable ubiquitin carboxyl-terminal
hydrolase FAF-Y" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=ISS] [GO:0030509
"BMP signaling pathway" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=TAS] [GO:0008234 "cysteine-type peptidase activity"
evidence=TAS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=TAS] [GO:0070410 "co-SMAD binding" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0007283
GO:GO:0030509 GO:GO:0007179 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 MIM:415000 Orphanet:1646 eggNOG:COG5077
KO:K11840 GO:GO:0070410 CleanEx:HS_USP10 HOGENOM:HOG000231283
HOVERGEN:HBG073749 OrthoDB:EOG46HG8S EMBL:AF000986 EMBL:Y13618
EMBL:Y13619 EMBL:AC002531 IPI:IPI00744575 IPI:IPI00874074
RefSeq:NP_004645.2 UniGene:Hs.598540 ProteinModelPortal:O00507
SMR:O00507 IntAct:O00507 STRING:O00507 MEROPS:C19.028
PhosphoSite:O00507 PaxDb:O00507 PRIDE:O00507
Ensembl:ENST00000338981 GeneID:8287 KEGG:hsa:8287 UCSC:uc004fst.1
CTD:8287 GeneCards:GC0YP014813 HGNC:HGNC:12633 MIM:400005
neXtProt:NX_O00507 PharmGKB:PA37258 InParanoid:O00507 OMA:RNIATIN
PhylomeDB:O00507 GenomeRNAi:8287 NextBio:31053 Bgee:O00507
CleanEx:HS_USP9Y Genevestigator:O00507 GermOnline:ENSG00000114374
Uniprot:O00507
Length = 2555
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/117 (32%), Positives = 52/117 (44%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + + SE L+G
Sbjct: 1813 KFNDYFEFPRELDMGPYTVAGVA--NLERDNVNSE-NELIEQKEQSDNETAGGTKYRLVG 1869
Query: 74 VTVHTGTADGGHYYSFIRDR-------DKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R D W F+D +V K D ++ +CFGGE
Sbjct: 1870 VLVHSGQASGGHYYSYIIQRNGKDDQTDHWYKFDDGDVTECKMDDDEEMKNQCFGGE 1926
>UNIPROTKB|I3LMY9 [details] [associations]
symbol:USP9Y "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 OMA:NICHRYS EMBL:CU861572
EMBL:FP565652 EMBL:FP565925 RefSeq:XP_003360581.2
Ensembl:ENSSSCT00000029625 GeneID:100625207 KEGG:ssc:100625207
Uniprot:I3LMY9
Length = 2568
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVPGVAK--LEGDNVNPESQLLQQNEQSEIETAGSTKYR-LVG 1867
Query: 74 VTVHTGTADGGHYYSFI-----RD--RDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I RD R++W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>UNIPROTKB|F1RX17 [details] [associations]
symbol:LOC100517440 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:CU861899 Ensembl:ENSSSCT00000013397 OMA:LERDNAN Uniprot:F1RX17
Length = 1812
Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1069 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNQESQLIKQNEQSDSETAGSTKYR-LVG 1125
Query: 74 VTVHTGTADGGHYYSFI--R-----DRDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFGGE
Sbjct: 1126 VLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1182
>UNIPROTKB|Q93008 [details] [associations]
symbol:USP9X "Probable ubiquitin carboxyl-terminal
hydrolase FAF-X" species:9606 "Homo sapiens" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=IDA] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=IMP;TAS] [GO:0030509 "BMP signaling
pathway" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
[GO:0007292 "female gamete generation" evidence=TAS] [GO:0008234
"cysteine-type peptidase activity" evidence=TAS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0070410 "co-SMAD binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0045177
GO:GO:0000122 GO:GO:0030509 GO:GO:0007179 GO:GO:0006511
GO:GO:0006367 GO:GO:0004197 GO:GO:0007292 GO:GO:0016579
GO:GO:0004221 eggNOG:COG5077 KO:K11840 OMA:NGTRPSE EMBL:X98296
EMBL:AL391259 EMBL:AL109797 EMBL:AF070645 IPI:IPI00003964
IPI:IPI00221012 RefSeq:NP_001034679.2 RefSeq:NP_001034680.2
UniGene:Hs.77578 ProteinModelPortal:Q93008 DIP:DIP-27562N
IntAct:Q93008 MINT:MINT-5006529 STRING:Q93008 MEROPS:C19.017
PhosphoSite:Q93008 DMDM:81175100 PaxDb:Q93008 PRIDE:Q93008
Ensembl:ENST00000324545 Ensembl:ENST00000378308 GeneID:8239
KEGG:hsa:8239 UCSC:uc004dfb.3 UCSC:uc004dfc.3 CTD:8239
GeneCards:GC0XP040944 HGNC:HGNC:12632 HPA:CAB011618 MIM:300072
neXtProt:NX_Q93008 PharmGKB:PA37257 HOGENOM:HOG000231283
HOVERGEN:HBG073749 OrthoDB:EOG46HG8S PhylomeDB:Q93008 ChiTaRS:USP9X
GenomeRNAi:8239 NextBio:30989 ArrayExpress:Q93008 Bgee:Q93008
CleanEx:HS_USP9X Genevestigator:Q93008 GermOnline:ENSG00000124486
Uniprot:Q93008
Length = 2570
Score = 144 (55.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNPESQLIQQSEQSESETAGSTKYR-LVG 1867
Query: 74 VTVHTGTADGGHYYSFI--R-----DRDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>UNIPROTKB|G5E630 [details] [associations]
symbol:LOC790347 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0070410 "co-SMAD binding"
evidence=IEA] [GO:0045177 "apical part of cell" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005737 GO:GO:0008234 GO:GO:0045177
GO:GO:0030509 GO:GO:0007179 GO:GO:0006511 GO:GO:0016579
GO:GO:0004221 GeneTree:ENSGT00650000093229 KO:K11840 OMA:NGTRPSE
CTD:8239 EMBL:DAAA02073613 EMBL:DAAA02073614 RefSeq:XP_002700253.1
RefSeq:XP_003584736.1 Ensembl:ENSBTAT00000050390 GeneID:507307
KEGG:bta:507307 NextBio:20868001 Uniprot:G5E630
Length = 2554
Score = 143 (55.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNPESQLIQQNEQSDSETAGSTKYR-LVG 1867
Query: 74 VTVHTGTADGGHYYSFI--R-----DRDKWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>RGD|1560056 [details] [associations]
symbol:Usp9x "ubiquitin specific peptidase 9, X-linked"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007179 "transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0030509 "BMP signaling
pathway" evidence=ISO] [GO:0045177 "apical part of cell"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1560056 GO:GO:0005737
GO:GO:0008234 GO:GO:0045177 GO:GO:0030509 GO:GO:0007179
GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 OMA:NGTRPSE
IPI:IPI00204923 PRIDE:D3ZXB5 Ensembl:ENSRNOT00000004814
UCSC:RGD:1560056 ArrayExpress:D3ZXB5 Uniprot:D3ZXB5
Length = 2558
Score = 139 (54.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNPESQLIQQNEQSESEKAGSTKYR-LVG 1867
Query: 74 VTVHTGTADGGHYYSFIRDRD-------KWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R+ +W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>MGI|MGI:894681 [details] [associations]
symbol:Usp9x "ubiquitin specific peptidase 9, X chromosome"
species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=ISO]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0051301 "cell
division" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:894681 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0008234
GO:GO:0045177 GO:GO:0030509 GO:GO:0007179 GO:GO:0006511
GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11840 GO:GO:0070410
MEROPS:C19.017 CTD:8239 HOGENOM:HOG000231283 HOVERGEN:HBG073749
OrthoDB:EOG46HG8S EMBL:U67874 EMBL:AL669967 EMBL:Z78153
IPI:IPI00108388 PIR:T30850 RefSeq:NP_033507.2 UniGene:Mm.242646
IntAct:P70398 STRING:P70398 PhosphoSite:P70398 PaxDb:P70398
PRIDE:P70398 DNASU:22284 GeneID:22284 KEGG:mmu:22284
InParanoid:P70398 NextBio:302415 CleanEx:MM_USP9X
Genevestigator:P70398 GermOnline:ENSMUSG00000031010 Uniprot:P70398
Length = 2559
Score = 139 (54.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E++ L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVAGVAK--LEGDNVNPESQLIQQNEQSESEKAGSTKYR-LVG 1867
Query: 74 VTVHTGTADGGHYYSFIRDRD-------KWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R+ +W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>DICTYBASE|DDB_G0292046 [details] [associations]
symbol:DDB_G0292046 "Ubiquitin carboxyl-terminal
hydrolase 34" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000626 InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SMART:SM00213 dictyBase:DDB_G0292046
EMBL:AAFI02000187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 RefSeq:XP_629788.1 ProteinModelPortal:Q54DT4
EnsemblProtists:DDB0184183 GeneID:8628465 KEGG:ddi:DDB_G0292046
InParanoid:Q54DT4 OMA:ISKECTH Uniprot:Q54DT4
Length = 3240
Score = 140 (54.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXX 61
R+ F++ TM K+N + FPM LD+ + + + E + K+
Sbjct: 2450 RFEFDLDTMRNNKLNDFYEFPMLLDIEQFTVESV------ERREKNNI--------LMTS 2495
Query: 62 XXXXXXXXXLIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L G+ +H GTAD GHY++ I+D W ND V+ +D +++ +CFGG
Sbjct: 2496 IDPNQYRYSLSGIVLHQGTADSGHYFTLIKDSTNGNWFELNDTLVQPYDPNRIPYDCFGG 2555
>FB|FBgn0005632 [details] [associations]
symbol:faf "fat facets" species:7227 "Drosophila
melanogaster" [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0048749
"compound eye development" evidence=IMP] [GO:0008583 "mystery cell
differentiation" evidence=IMP;TAS] [GO:0007349 "cellularization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0016579 "protein deubiquitination" evidence=IMP;NAS;IDA;TAS]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=NAS;TAS] [GO:0006897 "endocytosis" evidence=NAS]
[GO:0045861 "negative regulation of proteolysis" evidence=NAS]
[GO:0008354 "germ cell migration" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0009950 "dorsal/ventral
axis specification" evidence=IGI;IMP] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0007601 GO:GO:0006897 GO:GO:0045861
GO:GO:0048477 GO:GO:0050896 GO:GO:0009790 GO:GO:0006511
GO:GO:0007097 GO:GO:0007349 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0008354 EMBL:L04959 EMBL:L04958 EMBL:L04960
EMBL:AF145677 PIR:B49132 RefSeq:NP_524612.2 RefSeq:NP_733455.1
ProteinModelPortal:P55824 SMR:P55824 STRING:P55824 MEROPS:C19.007
PaxDb:P55824 PRIDE:P55824 EnsemblMetazoa:FBtr0085843 GeneID:43749
KEGG:dme:Dmel_CG1945 FlyBase:FBgn0005632 eggNOG:COG5077
GeneTree:ENSGT00650000093229 InParanoid:P55824 KO:K11840
OMA:NGTRPSE OrthoDB:EOG4D254M PhylomeDB:P55824 ChiTaRS:faf
GenomeRNAi:43749 NextBio:835588 Bgee:P55824 GermOnline:CG1945
GO:GO:0008583 Uniprot:P55824
Length = 2778
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/128 (30%), Positives = 56/128 (43%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXX 61
R+ ++ + K N +F FP LDM Y L KL+ E
Sbjct: 1914 RFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLA-------KLEGEV----VEVGDNCQ 1962
Query: 62 XXXXXXXXXLIGVTVHTGTADGGHYYSFIRDRD------KWLLFNDAEV---KHFDSSQL 112
L G+ VH+G A GGHY+S+I ++ +W F+D EV K + ++
Sbjct: 1963 TNVETTKYELTGIVVHSGQASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEM 2022
Query: 113 AAECFGGE 120
AECFGGE
Sbjct: 2023 KAECFGGE 2030
>UNIPROTKB|F1NHA0 [details] [associations]
symbol:USP28 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0010212 "response to ionizing
radiation" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0034644 "cellular response to UV" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0000077 GO:GO:0043234
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0008283
GO:GO:0010212 GO:GO:0006511 GO:GO:0034644 SUPFAM:SSF46934
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GeneTree:ENSGT00390000016082 IPI:IPI00651220 OMA:DLNRMHE
EMBL:AADN02041816 EMBL:AADN02041814 EMBL:AADN02041815
Ensembl:ENSGALT00000011287 Uniprot:F1NHA0
Length = 1047
Score = 117 (46.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY++FI D R WL +ND V +L + FGG CL
Sbjct: 587 LHAVLVHEGQANAGHYWAFIYDQPRKSWLKYNDISVTESSWEELERDSFGGLRNASAYCL 646
Query: 129 KLLSTAPQYIDATPPTSSRLVQY 151
+S ++ A S + Q+
Sbjct: 647 MYISDKVSHVVAGEGDGSEVGQF 669
Score = 58 (25.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE-EKLKSE 48
R+ FN EK++T FP + M Y+ K L+ +E +KLK +
Sbjct: 363 RFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCSKELIQTKREEMKKLKEK 412
>UNIPROTKB|Q5ZID5 [details] [associations]
symbol:USP28 "Ubiquitin carboxyl-terminal hydrolase 28"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0000077 "DNA damage checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR009060 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0000077 GO:GO:0005654 GO:GO:0042771 GO:GO:0008283
GO:GO:0006281 GO:GO:0010212 GO:GO:0006511 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 KO:K11849 HOGENOM:HOG000007956 HOVERGEN:HBG056030
EMBL:AJ720849 IPI:IPI00651220 RefSeq:NP_001026667.1
UniGene:Gga.22397 ProteinModelPortal:Q5ZID5 MEROPS:C19.054
GeneID:428246 KEGG:gga:428246 CTD:57646 InParanoid:Q5ZID5
OrthoDB:EOG4WM4T0 NextBio:20829288 Uniprot:Q5ZID5
Length = 1047
Score = 117 (46.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY++FI D R WL +ND V +L + FGG CL
Sbjct: 587 LHAVLVHEGQANAGHYWAFIYDQPRKSWLKYNDISVTESSWEELERDSFGGLRNASAYCL 646
Query: 129 KLLSTAPQYIDATPPTSSRLVQY 151
+S ++ A S + Q+
Sbjct: 647 MYISDKVSHVVAGEGDGSEVGQF 669
Score = 58 (25.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE-EKLKSE 48
R+ FN EK++T FP + M Y+ K L+ +E +KLK +
Sbjct: 363 RFEFNQSLGQPEKIHTKLEFPQTIFMDRYLYCSKELIQTKREEMKKLKEK 412
>UNIPROTKB|E1BWJ5 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 CTD:8239 EMBL:AADN02011032
IPI:IPI00574592 RefSeq:XP_416773.2 UniGene:Gga.54508
Ensembl:ENSGALT00000026178 GeneID:418569 KEGG:gga:418569
NextBio:20821735 ArrayExpress:E1BWJ5 Uniprot:E1BWJ5
Length = 2552
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/117 (30%), Positives = 52/117 (44%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E + L+G
Sbjct: 1811 KFNDYFEFPRELDMEPYTVAGVAK--LEGDDVNPENQIIQNEQSENEHSGSTKYR--LVG 1866
Query: 74 VTVHTGTADGGHYYSFIRDRD-------KWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R+ +W F+D +V K D ++ +CFGGE
Sbjct: 1867 VLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1923
>UNIPROTKB|E1BWJ4 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:AADN02011032 IPI:IPI00813472
Ensembl:ENSGALT00000026179 ArrayExpress:E1BWJ4 Uniprot:E1BWJ4
Length = 2553
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/117 (30%), Positives = 52/117 (44%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E + L+G
Sbjct: 1812 KFNDYFEFPRELDMEPYTVAGVAK--LEGDDVNPENQIIQNEQSENEHSGSTKYR--LVG 1867
Query: 74 VTVHTGTADGGHYYSFIRDRD-------KWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R+ +W F+D +V K D ++ +CFGGE
Sbjct: 1868 VLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1924
>UNIPROTKB|E1C806 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:NGTRPSE EMBL:AADN02011032
IPI:IPI00821347 Ensembl:ENSGALT00000036657 ArrayExpress:E1C806
Uniprot:E1C806
Length = 2556
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/117 (30%), Positives = 52/117 (44%)
Query: 14 KVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIG 73
K N +F FP LDM Y + + + + E + L+G
Sbjct: 1815 KFNDYFEFPRELDMEPYTVAGVAK--LEGDDVNPENQIIQNEQSENEHSGSTKYR--LVG 1870
Query: 74 VTVHTGTADGGHYYSFIRDRD-------KWLLFNDAEV---KHFDSSQLAAECFGGE 120
V VH+G A GGHYYS+I R+ +W F+D +V K D ++ +CFGGE
Sbjct: 1871 VLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGE 1927
>UNIPROTKB|I3L8M9 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0008234
GO:GO:0006511 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004221 GeneTree:ENSGT00390000016082
EMBL:FP236691 Ensembl:ENSSSCT00000027672 Uniprot:I3L8M9
Length = 1042
Score = 116 (45.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 581 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 640
Query: 129 KLLSTAPQYI 138
++ PQ++
Sbjct: 641 MYINDKPQFL 650
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 361 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 405
>UNIPROTKB|F1MP13 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR009060
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF02809 GO:GO:0006511 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0071108 GO:GO:0070536
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221 OMA:DAFQMKA
GeneTree:ENSGT00390000016082 EMBL:DAAA02000497 IPI:IPI00692659
Ensembl:ENSBTAT00000025716 Uniprot:F1MP13
Length = 1052
Score = 116 (45.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 591 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 650
Query: 129 KLLSTAPQYI 138
++ PQ++
Sbjct: 651 MYINDKPQFL 660
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 374 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 418
>WB|WBGene00011507 [details] [associations]
symbol:T05H10.1 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
EMBL:Z47812 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077
GeneTree:ENSGT00630000089581 KO:K11857 PIR:A88225 PIR:T24559
RefSeq:NP_495686.2 ProteinModelPortal:Q22240 SMR:Q22240
STRING:Q22240 MEROPS:C19.A38 PaxDb:Q22240 EnsemblMetazoa:T05H10.1
GeneID:174290 KEGG:cel:CELE_T05H10.1 UCSC:T05H10.1 CTD:174290
WormBase:T05H10.1 HOGENOM:HOG000020027 InParanoid:Q22240
OMA:TSNEAYD NextBio:883388 Uniprot:Q22240
Length = 1326
Score = 110 (43.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 71 LIGVTVHTGTADGGHYYSFIR--DRDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G A GGHY+++I+ D+D+W +FND V F + + FGG
Sbjct: 406 LFSVMVHSGNAAGGHYFAYIKNLDQDRWYVFNDTRVD-FATPLEIEKSFGG 455
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEK 33
R+ F+ TM + K+N +FP LD++ YV K
Sbjct: 299 RFDFDYNTMHRIKLNDKMTFPDVLDLNDYVNK 330
>UNIPROTKB|I3LU36 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR009060
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF02809 GO:GO:0006511 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0071108 GO:GO:0070536
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221 OMA:DAFQMKA
GeneTree:ENSGT00390000016082 EMBL:FP236691
Ensembl:ENSSSCT00000022689 Uniprot:I3LU36
Length = 1069
Score = 116 (45.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 595 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 654
Query: 129 KLLSTAPQYI 138
++ PQ++
Sbjct: 655 MYINDKPQFL 664
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 375 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 419
>ZFIN|ZDB-GENE-061019-1 [details] [associations]
symbol:usp9 "ubiquitin specific peptidase 9"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-061019-1
SUPFAM:SSF48371 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:BX545856 IPI:IPI00998060
Ensembl:ENSDART00000122803 Uniprot:E7EXC7
Length = 2594
Score = 121 (47.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 71 LIGVTVHTGTADGGHYYSFI--R-------DRDKWLLFNDAEV---KHFDSSQLAAECFG 118
L+GV VH+G A GGHYYS+I R +R++W F+D +V K D ++ +CFG
Sbjct: 1866 LVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGDVTECKMDDDEEMKNQCFG 1925
Query: 119 GE 120
GE
Sbjct: 1926 GE 1927
Score = 49 (22.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 14 KVNTHFSFPMRLDMSGY 30
K N +F FP LDM Y
Sbjct: 1810 KFNDYFEFPRELDMEPY 1826
>UNIPROTKB|H3BLX5 [details] [associations]
symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 EMBL:AL590103 EMBL:AL359815
HGNC:HGNC:18533 ChiTaRS:USP48 Ensembl:ENST00000374730
Uniprot:H3BLX5
Length = 115
Score = 70 (29.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 1 MRYTFNMVTMLKEKVNTHFSFPMRLDMSGYVE 32
MR+ F+ T K+K+NT+ F LDM YVE
Sbjct: 13 MRFVFDRQTGHKKKLNTYIGFSEILDMEPYVE 44
Score = 70 (29.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 71 LIGVTVHTG-TADGGHYYSFIRDRD--KWLLFNDAEVKHFDSSQL 112
L V +H G +A GHY + ++D +W FND +++ + +L
Sbjct: 54 LSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKL 98
>UNIPROTKB|F1NTM5 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0008234
GO:GO:0006511 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004221 GeneTree:ENSGT00390000016082
EMBL:AADN02042919 IPI:IPI00601499 Ensembl:ENSGALT00000036819
ArrayExpress:F1NTM5 Uniprot:F1NTM5
Length = 1047
Score = 113 (44.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +++W+ +ND V +L + FGG CL
Sbjct: 587 LHAVLVHEGQANAGHYWAYIYDHHQNRWMKYNDISVTKSTWEELERDSFGGYRNASAYCL 646
Query: 129 KLLSTAPQYI 138
++ QY+
Sbjct: 647 MYINDKEQYL 656
Score = 50 (22.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ K+ + +++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNRELTRIKRDEIK 420
>UNIPROTKB|G3V1N5 [details] [associations]
symbol:USP28 "Ubiquitin specific peptidase 28, isoform
CRA_c" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 EMBL:CH471065
GO:GO:0006511 GO:GO:0004221 EMBL:AP003170 EMBL:AP001874
UniGene:Hs.503891 HGNC:HGNC:12625 ProteinModelPortal:G3V1N5
Ensembl:ENST00000544967 ArrayExpress:G3V1N5 Bgee:G3V1N5
Uniprot:G3V1N5
Length = 753
Score = 112 (44.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 71 LIGVTVHTGTADGGHYYSFI--RDRDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I + R WL +ND V ++ + +GG V CL
Sbjct: 294 LHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVERDSYGGLRNVSAYCL 353
Query: 129 KLLSTAPQYIDA-TPPTSS 146
++ Y +A PT S
Sbjct: 354 MYINDKLPYFNAEAAPTES 372
Score = 48 (22.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE--EKLKSEAR 50
R+ FN EK++ FP + M Y+ K L+ ++ +E KLK E +
Sbjct: 77 RFEFNQSLGQPEKIHNKLEFPQIIYMDRYMYRSKELI-RNKRECIRKLKEEIK 128
>UNIPROTKB|F1NCR4 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] InterPro:IPR001394 InterPro:IPR009060
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF02809 GO:GO:0006511 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0071108 GO:GO:0070536
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221 OMA:DAFQMKA
GeneTree:ENSGT00390000016082 EMBL:AADN02042919 IPI:IPI00821334
Ensembl:ENSGALT00000025309 ArrayExpress:F1NCR4 Uniprot:F1NCR4
Length = 1079
Score = 113 (44.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +++W+ +ND V +L + FGG CL
Sbjct: 587 LHAVLVHEGQANAGHYWAYIYDHHQNRWMKYNDISVTKSTWEELERDSFGGYRNASAYCL 646
Query: 129 KLLSTAPQYI 138
++ QY+
Sbjct: 647 MYINDKEQYL 656
Score = 50 (22.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ K+ + +++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNRELTRIKRDEIK 420
>TAIR|locus:2144118 [details] [associations]
symbol:UBP12 "ubiquitin-specific protease 12"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008234
EMBL:AP002543 GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599
HSSP:Q93009 eggNOG:COG5077 EMBL:AF302663 EMBL:AF360198
EMBL:AY142616 IPI:IPI00540940 IPI:IPI00547717 RefSeq:NP_568171.1
RefSeq:NP_850783.1 UniGene:At.22362 UniGene:At.67352
ProteinModelPortal:Q9FPT1 SMR:Q9FPT1 STRING:Q9FPT1 PaxDb:Q9FPT1
PRIDE:Q9FPT1 EnsemblPlants:AT5G06600.1 GeneID:830548
KEGG:ath:AT5G06600 TAIR:At5g06600 HOGENOM:HOG000160240
InParanoid:Q9FPT1 KO:K11838 OMA:RLFVKSS PhylomeDB:Q9FPT1
ProtClustDB:CLSN2689510 Genevestigator:Q9FPT1 InterPro:IPR024729
Pfam:PF12436 Uniprot:Q9FPT1
Length = 1116
Score = 107 (42.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGE 120
L V VH+G GGHYY+FIR D+W F+D V D + E +GGE
Sbjct: 441 LHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGE 492
Score = 57 (25.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 3 YTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMP 37
Y F TM+K +N + FP+ LD+ K+L P
Sbjct: 397 YDFMRDTMVK--INDRYEFPLELDLDREDGKYLSP 429
>UNIPROTKB|B4E3L3 [details] [associations]
symbol:USP28 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 EMBL:AP003170 HOGENOM:HOG000007956
HOVERGEN:HBG056030 EMBL:AP001874 UniGene:Hs.503891 HGNC:HGNC:12625
EMBL:AK304770 IPI:IPI01009333 STRING:B4E3L3 Ensembl:ENST00000545540
UCSC:uc001pog.3 Uniprot:B4E3L3
Length = 920
Score = 112 (44.5 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 71 LIGVTVHTGTADGGHYYSFI--RDRDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I + R WL +ND V ++ + +GG V CL
Sbjct: 461 LHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVERDSYGGLRNVSAYCL 520
Query: 129 KLLSTAPQYIDA-TPPTSS 146
++ Y +A PT S
Sbjct: 521 MYINDKLPYFNAEAAPTES 539
Score = 48 (22.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE--EKLKSEAR 50
R+ FN EK++ FP + M Y+ K L+ ++ +E KLK E +
Sbjct: 244 RFEFNQSLGQPEKIHNKLEFPQIIYMDRYMYRSKELI-RNKRECIRKLKEEIK 295
>TAIR|locus:2081501 [details] [associations]
symbol:UBP13 "ubiquitin-specific protease 13"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP002040 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009 eggNOG:COG5077
EMBL:AC016795 UniGene:At.25337 HOGENOM:HOG000160240 KO:K11838
ProtClustDB:CLSN2689510 InterPro:IPR024729 Pfam:PF12436
EMBL:BT002760 EMBL:AK226819 IPI:IPI00517979 RefSeq:NP_187797.3
ProteinModelPortal:Q84WU2 SMR:Q84WU2 STRING:Q84WU2 MEROPS:C19.A53
PaxDb:Q84WU2 PRIDE:Q84WU2 ProMEX:Q84WU2 EnsemblPlants:AT3G11910.1
GeneID:820364 KEGG:ath:AT3G11910 TAIR:At3g11910 InParanoid:Q84WU2
OMA:DITEQIG PhylomeDB:Q84WU2 Genevestigator:Q84WU2 Uniprot:Q84WU2
Length = 1115
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGE 120
L V VH+G GGHYY+FIR D+W F+D V D + E +GGE
Sbjct: 440 LHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGE 491
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 3 YTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMP 37
Y F TM+K +N + FP++LD+ ++L P
Sbjct: 396 YDFMRDTMVK--INDRYEFPLQLDLDREDGRYLSP 428
>FB|FBgn0016756 [details] [associations]
symbol:Ubp64E "Ubiquitin-specific protease 64E" species:7227
"Drosophila melanogaster" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006508 "proteolysis" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IDA] [GO:0016579
"protein deubiquitination" evidence=IDA] [GO:0042675 "compound eye
cone cell differentiation" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031935 "regulation of chromatin
silencing" evidence=IMP] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005634 EMBL:AE014296 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5077 GeneTree:ENSGT00630000089581 KO:K11857
EMBL:BT003784 EMBL:X99211 EMBL:AY058672 RefSeq:NP_523937.2
RefSeq:NP_729087.1 RefSeq:NP_996001.2 UniGene:Dm.3704
ProteinModelPortal:Q24574 SMR:Q24574 IntAct:Q24574 MINT:MINT-971166
STRING:Q24574 MEROPS:C19.A50 PaxDb:Q24574
EnsemblMetazoa:FBtr0077095 EnsemblMetazoa:FBtr0077096 GeneID:38644
KEGG:dme:Dmel_CG5486 CTD:38644 FlyBase:FBgn0016756
InParanoid:Q24574 OMA:CLECNTE OrthoDB:EOG4X69Q3 PhylomeDB:Q24574
ChiTaRS:Ubp64E GenomeRNAi:38644 NextBio:809673 Bgee:Q24574
GermOnline:CG5486 GO:GO:0031935 Uniprot:Q24574
Length = 1556
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/94 (27%), Positives = 37/94 (39%)
Query: 28 SGYVEKHLMPQHYQEEKLKSEARXXXXXXXXXXXXXXXXXXXXLIGVTVHTGTADGGHYY 87
SG V QH + + E L + +H+G+A GGHYY
Sbjct: 663 SGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYY 722
Query: 88 SFIRDRD--KWLLFNDAEVKHFDSSQLAAECFGG 119
++I+D D +W FND V + FGG
Sbjct: 723 AYIKDFDNNEWFCFNDQNVTSITQEDIQRS-FGG 755
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEK 33
R+ F+ TM + K+N +FP L+++ ++ +
Sbjct: 598 RFDFDYQTMHRIKLNDRVTFPQTLNLNTFINR 629
>UNIPROTKB|Q96RU2 [details] [associations]
symbol:USP28 "Ubiquitin carboxyl-terminal hydrolase 28"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IMP] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0010212
"response to ionizing radiation" evidence=IDA] [GO:0042771
"intrinsic apoptotic signaling pathway in response to DNA damage by
p53 class mediator" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0000077 GO:GO:0043234
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH471065
GO:GO:0008283 GO:GO:0006281 GO:GO:0010212 GO:GO:0006511
GO:GO:0034644 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
EMBL:AP003170 eggNOG:COG5077 KO:K11849 HOGENOM:HOG000007956
HOVERGEN:HBG056030 MEROPS:C19.054 CTD:57646 OrthoDB:EOG4WM4T0
EMBL:AF266283 EMBL:EF445045 EMBL:AP001874 EMBL:AB040948
IPI:IPI00045496 IPI:IPI00103951 RefSeq:NP_065937.1
UniGene:Hs.503891 PDB:2LVA PDBsum:2LVA ProteinModelPortal:Q96RU2
SMR:Q96RU2 IntAct:Q96RU2 STRING:Q96RU2 PhosphoSite:Q96RU2
DMDM:20140700 PaxDb:Q96RU2 PRIDE:Q96RU2 Ensembl:ENST00000003302
Ensembl:ENST00000260188 GeneID:57646 KEGG:hsa:57646 UCSC:uc001poh.3
GeneCards:GC11M113668 HGNC:HGNC:12625 HPA:HPA006778 HPA:HPA006779
MIM:610748 neXtProt:NX_Q96RU2 PharmGKB:PA37250 InParanoid:Q96RU2
OMA:DLNRMHE GenomeRNAi:57646 NextBio:64378 ArrayExpress:Q96RU2
Bgee:Q96RU2 CleanEx:HS_USP28 Genevestigator:Q96RU2
GermOnline:ENSG00000048028 Uniprot:Q96RU2
Length = 1077
Score = 112 (44.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 71 LIGVTVHTGTADGGHYYSFI--RDRDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I + R WL +ND V ++ + +GG V CL
Sbjct: 586 LHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVERDSYGGLRNVSAYCL 645
Query: 129 KLLSTAPQYIDA-TPPTSS 146
++ Y +A PT S
Sbjct: 646 MYINDKLPYFNAEAAPTES 664
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE--EKLKSEAR 50
R+ FN EK++ FP + M Y+ K L+ ++ +E KLK E +
Sbjct: 369 RFEFNQSLGQPEKIHNKLEFPQIIYMDRYMYRSKELI-RNKRECIRKLKEEIK 420
>ZFIN|ZDB-GENE-040426-2847 [details] [associations]
symbol:usp25 "ubiquitin specific protease 25"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809
ZFIN:ZDB-GENE-040426-2847 GO:GO:0008234 GO:GO:0006511 GO:GO:0009953
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 SUPFAM:SSF46934
GO:GO:0004221 GeneTree:ENSGT00390000016082 EMBL:CU929169
EMBL:FP016248 IPI:IPI00933809 Ensembl:ENSDART00000115250
ArrayExpress:E7FFB3 Bgee:E7FFB3 Uniprot:E7FFB3
Length = 1073
Score = 106 (42.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I DR +W+ +ND V +L + FGG CL
Sbjct: 595 LHAVLVHEGQANAGHYWAYIYDRHHQRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 654
Query: 129 KLLSTAPQYI 138
+ ++
Sbjct: 655 MYIDDKKPFL 664
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L M Y++++ + E+++
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIR 420
>UNIPROTKB|H0YG96 [details] [associations]
symbol:USP28 "Ubiquitin carboxyl-terminal hydrolase 28"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 EMBL:AP003170 EMBL:AP001874
HGNC:HGNC:12625 Ensembl:ENST00000538475 Bgee:H0YG96 Uniprot:H0YG96
Length = 360
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 71 LIGVTVHTGTADGGHYYSFI--RDRDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I + R WL +ND V ++ + +GG V CL
Sbjct: 290 LHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVERDSYGGLRNVSAYCL 349
Query: 129 KLLSTAPQYID 139
++ Y +
Sbjct: 350 MYINDKLPYFN 360
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE--EKLKSEAR 50
R+ FN EK++ FP + M Y+ K L+ ++ +E KLK E +
Sbjct: 133 RFEFNQSLGQPEKIHNKLEFPQIIYMDRYMYRSKELI-RNKRECIRKLKEEIK 184
>UNIPROTKB|J9P3Q0 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0008234
GO:GO:0006511 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004221 GeneTree:ENSGT00390000016082
EMBL:AAEX03016440 Ensembl:ENSCAFT00000045246 Uniprot:J9P3Q0
Length = 1054
Score = 108 (43.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 592 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 651
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 652 MYINDKAQFL 661
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 420
>UNIPROTKB|E2QW53 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0008234
GO:GO:0006511 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004221 KO:K11849 CTD:29761
GeneTree:ENSGT00390000016082 EMBL:AAEX03016440 RefSeq:XP_535562.2
Ensembl:ENSCAFT00000013084 GeneID:478387 KEGG:cfa:478387
Uniprot:E2QW53
Length = 1085
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 592 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 651
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 652 MYINDKAQFL 661
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 420
>UNIPROTKB|J9PA48 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0008234
GO:GO:0006511 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
SUPFAM:SSF46934 GO:GO:0004221 OMA:DAFQMKA
GeneTree:ENSGT00390000016082 EMBL:AAEX03016440
Ensembl:ENSCAFT00000049155 Uniprot:J9PA48
Length = 1123
Score = 108 (43.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D ++W+ +ND V +L + FGG CL
Sbjct: 592 LHAVLVHEGQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 651
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 652 MYINDKAQFL 661
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 420
>UNIPROTKB|Q9UHP3 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase 25"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0032183
"SUMO binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IMP] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IMP] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IMP] [GO:0006508 "proteolysis" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0008233
"peptidase activity" evidence=TAS] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF02809 GO:GO:0005634
GO:GO:0005737 GO:GO:0006508 EMBL:CH471079 GO:GO:0006511
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 GO:GO:0071108
GO:GO:0070536 SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221
GO:GO:0032183 eggNOG:COG5077 KO:K11849 CleanEx:HS_USP21
EMBL:AF170562 EMBL:AF134213 EMBL:FJ763652 EMBL:BC075792
EMBL:AK022574 IPI:IPI00219886 IPI:IPI00300439 IPI:IPI00791721
RefSeq:NP_037528.3 UniGene:Hs.473370 ProteinModelPortal:Q9UHP3
SMR:Q9UHP3 IntAct:Q9UHP3 MINT:MINT-1188384 STRING:Q9UHP3
MEROPS:C19.041 PhosphoSite:Q9UHP3 DMDM:302393833 PaxDb:Q9UHP3
PRIDE:Q9UHP3 DNASU:29761 Ensembl:ENST00000285679
Ensembl:ENST00000285681 Ensembl:ENST00000400183 GeneID:29761
KEGG:hsa:29761 UCSC:uc002yjy.1 UCSC:uc002yjz.1 UCSC:uc011aby.1
CTD:29761 GeneCards:GC21P017102 HGNC:HGNC:12624 HPA:HPA018297
HPA:HPA024142 MIM:604736 neXtProt:NX_Q9UHP3 PharmGKB:PA37249
HOGENOM:HOG000007956 HOVERGEN:HBG056030 InParanoid:Q9UHP3
OMA:DAFQMKA OrthoDB:EOG49S65J ChiTaRS:USP25 GenomeRNAi:29761
NextBio:52254 ArrayExpress:Q9UHP3 Bgee:Q9UHP3 CleanEx:HS_USP25
Genevestigator:Q9UHP3 GermOnline:ENSG00000155313 Uniprot:Q9UHP3
Length = 1055
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +W+ +ND V +L + FGG CL
Sbjct: 593 LHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 652
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 653 MYINDKAQFL 662
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 420
>RGD|1309003 [details] [associations]
symbol:Usp25 "ubiquitin specific peptidase 25" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0032183 "SUMO binding" evidence=ISO]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
InterPro:IPR001394 InterPro:IPR009060 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
Pfam:PF02809 RGD:1309003 GO:GO:0006511 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0071108 GO:GO:0070536
SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221 KO:K11849 EMBL:CH473989
CTD:29761 OrthoDB:EOG49S65J GeneTree:ENSGT00390000016082
IPI:IPI00561229 RefSeq:NP_001100584.1 RefSeq:XP_003751052.1
UniGene:Rn.23509 Ensembl:ENSRNOT00000002150 GeneID:304150
KEGG:rno:304150 UCSC:RGD:1309003 NextBio:652651 Uniprot:D4ACD3
Length = 1055
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +W+ +ND V +L + FGG CL
Sbjct: 594 LHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 653
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 654 MYINDKAQFL 663
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 377 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 421
>UNIPROTKB|H7C253 [details] [associations]
symbol:USP25 "Ubiquitin carboxyl-terminal hydrolase 25"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 HGNC:HGNC:12624 ChiTaRS:USP25
EMBL:AJ010597 EMBL:AJ010598 ProteinModelPortal:H7C253
Ensembl:ENST00000453553 Uniprot:H7C253
Length = 204
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +W+ +ND V +L + FGG CL
Sbjct: 122 LHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 181
Query: 129 KLLSTAPQYI 138
++ Q++
Sbjct: 182 MYINDKAQFL 191
>MGI|MGI:1353655 [details] [associations]
symbol:Usp25 "ubiquitin specific peptidase 25" species:10090
"Mus musculus" [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0032183 "SUMO
binding" evidence=ISO] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISO] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISO] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1353655 Pfam:PF02809
GO:GO:0005634 GO:GO:0005737 GO:GO:0000502 GO:GO:0006511
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 GO:GO:0071108
GO:GO:0070536 SUPFAM:SSF46934 GO:GO:0004843 GO:GO:0004221
eggNOG:COG5077 KO:K11849 MEROPS:C19.041 CTD:29761
HOGENOM:HOG000007956 HOVERGEN:HBG056030 OMA:DAFQMKA
OrthoDB:EOG49S65J ChiTaRS:USP25 EMBL:AF170563 EMBL:BC048171
EMBL:BC063059 IPI:IPI00331006 RefSeq:NP_038946.2 UniGene:Mm.40986
PDB:1VDL PDBsum:1VDL ProteinModelPortal:P57080 SMR:P57080
STRING:P57080 PhosphoSite:P57080 PaxDb:P57080 PRIDE:P57080
Ensembl:ENSMUST00000023580 GeneID:30940 KEGG:mmu:30940
UCSC:uc007zsb.1 GeneTree:ENSGT00390000016082 InParanoid:P57080
EvolutionaryTrace:P57080 NextBio:307378 Bgee:P57080
CleanEx:MM_USP25 Genevestigator:P57080
GermOnline:ENSMUSG00000022867 Uniprot:P57080
Length = 1055
Score = 106 (42.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR--DKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNACL 128
L V VH G A+ GHY+++I D +W+ +ND V +L + FGG CL
Sbjct: 594 LHAVLVHEGQANAGHYWAYIFDHRESRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCL 653
Query: 129 KLLSTAPQYI 138
+ Q++
Sbjct: 654 MYIDDKAQFL 663
Score = 52 (23.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP L + Y+ ++ + E++K
Sbjct: 376 RFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK 420
>RGD|1310411 [details] [associations]
symbol:Usp47 "ubiquitin specific peptidase 47" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA;ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0030307 "positive regulation of cell growth"
evidence=IEA;ISO] [GO:0034644 "cellular response to UV"
evidence=IEA;ISO] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0071987
"WD40-repeat domain binding" evidence=IEA;ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1310411 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55031 KO:K11857
EMBL:AC147546 IPI:IPI00870919 RefSeq:NP_001101012.2
UniGene:Rn.101536 PRIDE:F1MAA1 Ensembl:ENSRNOT00000065712
GeneID:308896 KEGG:rno:308896 UCSC:RGD:1310411 NextBio:659738
ArrayExpress:F1MAA1 Uniprot:F1MAA1
Length = 1355
Score = 93 (37.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ D+W FND V + + GG
Sbjct: 469 LFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIK-KTHGG 518
Score = 70 (29.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVE 32
R+ F+ TM + K+N SFP LDMS +++
Sbjct: 372 RFDFDYTTMHRIKLNDRMSFPEELDMSTFID 402
>UNIPROTKB|E9PT09 [details] [associations]
symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010972 "negative regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
response to UV" evidence=IEA] [GO:0035520 "monoubiquitinated
protein deubiquitination" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
RGD:1310411 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AC147546
IPI:IPI00950497 Ensembl:ENSRNOT00000064293 ArrayExpress:E9PT09
Uniprot:E9PT09
Length = 1357
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ D+W FND V + + GG
Sbjct: 469 LFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIK-KTHGG 518
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVE 32
R+ F+ TM + K+N SFP LDMS +++
Sbjct: 372 RFDFDYTTMHRIKLNDRMSFPEELDMSTFID 402
>UNIPROTKB|F1LYA3 [details] [associations]
symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1310411 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
GO:GO:0010972 EMBL:AC147546 IPI:IPI00949212
Ensembl:ENSRNOT00000022817 ArrayExpress:F1LYA3 Uniprot:F1LYA3
Length = 1363
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ D+W FND V + + GG
Sbjct: 476 LFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIK-KTHGG 525
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVE 32
R+ F+ TM + K+N SFP LDMS +++
Sbjct: 379 RFDFDYTTMHRIKLNDRMSFPEELDMSTFID 409
>MGI|MGI:1922246 [details] [associations]
symbol:Usp47 "ubiquitin specific peptidase 47" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0010972
"negative regulation of G2/M transition of mitotic cell cycle"
evidence=ISO;ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0030307 "positive regulation of cell growth" evidence=ISO;ISS]
[GO:0034644 "cellular response to UV" evidence=IMP] [GO:0035520
"monoubiquitinated protein deubiquitination" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;IMP]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0071987 "WD40-repeat domain binding"
evidence=ISO] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1922246
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0042493 GO:GO:0006284 GO:GO:0006511
GO:GO:0019005 GO:GO:0034644 GO:GO:0004843 GO:GO:0004221
GO:GO:0035520 GO:GO:0010972 eggNOG:COG5077
GeneTree:ENSGT00630000089581 OMA:NKSETGY MEROPS:C19.055 CTD:55031
HOVERGEN:HBG058854 KO:K11857 EMBL:AK030909 EMBL:AK030963
EMBL:AK041541 EMBL:AK082114 EMBL:AK087981 EMBL:AK131138
EMBL:BC012722 EMBL:BC024117 EMBL:BC089364 EMBL:BC108425
IPI:IPI00420143 IPI:IPI00608091 RefSeq:NP_598519.2
RefSeq:NP_796223.2 UniGene:Mm.16974 ProteinModelPortal:Q8BY87
SMR:Q8BY87 STRING:Q8BY87 PaxDb:Q8BY87 PRIDE:Q8BY87
Ensembl:ENSMUST00000106653 GeneID:74996 KEGG:mmu:74996
UCSC:uc009jgg.2 UCSC:uc009jgh.2 InParanoid:Q32NY0 OrthoDB:EOG4BRWJW
NextBio:341978 Bgee:Q8BY87 CleanEx:MM_USP47 Genevestigator:Q8BY87
GermOnline:ENSMUSG00000059263 Uniprot:Q8BY87
Length = 1376
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ D+W FND V + + GG
Sbjct: 489 LFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIK-KTHGG 538
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVE 32
R+ F+ TM + K+N SFP LDMS +++
Sbjct: 392 RFDFDYTTMHRIKLNDRMSFPEELDMSTFID 422
>UNIPROTKB|E1C1R4 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase 47"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010972 "negative regulation
of G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
response to UV" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
GO:GO:0010972 GeneTree:ENSGT00630000089581 EMBL:AADN02030606
EMBL:AADN02030607 IPI:IPI00587332 UniGene:Gga.5374
Ensembl:ENSGALT00000008932 OMA:NKSETGY Uniprot:E1C1R4
Length = 1375
Score = 96 (38.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ D+W FND V + + +GG
Sbjct: 488 LFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIK-KTYGG 537
Score = 66 (28.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGY--VEKHLMPQ 38
R+ F+ TM + K+N +FP LDMS + VE PQ
Sbjct: 391 RFDFDYTTMHRIKLNDRMTFPEELDMSIFIDVEDEKSPQ 429
>ZFIN|ZDB-GENE-041008-142 [details] [associations]
symbol:usp28 "ubiquitin specific peptidase 28"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0021551 "central nervous system morphogenesis"
evidence=IMP] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR009060
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-041008-142 GO:GO:0008234
GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221 GO:GO:0021551 KO:K11849
GeneTree:ENSGT00390000016082 CTD:57646 EMBL:BX296544
IPI:IPI00998561 RefSeq:XP_001920096.1 UniGene:Dr.161231
UniGene:Dr.88718 Ensembl:ENSDART00000003076 GeneID:567050
KEGG:dre:567050 NextBio:20888503 Bgee:E7FD72 Uniprot:E7FD72
Length = 1163
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGGEMTVLNA-C 127
L V VH G A GHY+++I D + +WL +ND V +L + +GG MT +A C
Sbjct: 566 LHAVLVHEGQASAGHYWAYIYDHAQRRWLKYNDVLVAESTWEELVRDSYGG-MTNASAYC 624
Query: 128 LKLLSTAPQYIDA 140
L ++ Y+ A
Sbjct: 625 LMYINDNLPYLIA 637
Score = 56 (24.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYVEKHLMPQHYQEEKLK 46
R+ FN EK++ FP + M Y+ K++ H + ++K
Sbjct: 356 RFEFNQSLGRPEKIHKKLEFPQVIYMDRYLHKNVNQTHGRRGEVK 400
>UNIPROTKB|F1S6W7 [details] [associations]
symbol:USP47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:CU462938
Ensembl:ENSSSCT00000014642 Uniprot:F1S6W7
Length = 1084
Score = 89 (36.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 71 LIGVTVHTGTADGGHYYSFIRD--RDKWLLFNDAEVKHFDSSQLAAECFGG 119
L V VH+G+A GGHYY+ I+ ++W FND V + + GG
Sbjct: 195 LFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIK-KTHGG 244
Score = 68 (29.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGY--VEKHLMPQ 38
R+ F+ TM + K+N +FP LDMS + VE PQ
Sbjct: 98 RFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQ 136
>WB|WBGene00011980 [details] [associations]
symbol:T24B8.7 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0016246
GO:GO:0032940 GO:GO:0008234 GO:GO:0010171 GO:GO:0000003
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0006511
InterPro:IPR013763 SUPFAM:SSF47954 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:Z54218 EMBL:Z68338
RefSeq:NP_495931.3 ProteinModelPortal:G5EG81 PRIDE:G5EG81
EnsemblMetazoa:T24B8.7b GeneID:174440 KEGG:cel:CELE_T24B8.7
CTD:174440 WormBase:T24B8.7b OMA:IGCRQAA Uniprot:G5EG81
Length = 2956
Score = 90 (36.7 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 71 LIGVTVHTGTADGGHYYSFIRDR----------DKWLLFNDAEVKHFDSSQLAAECFGGE 120
L+GV H+G A GHYYSFI++R +KW ND V + + +GG
Sbjct: 2149 LVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDLWYGGT 2208
Query: 121 MT 122
T
Sbjct: 2209 FT 2210
Score = 75 (31.5 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 2 RYTFNMVTMLKEKVNTHFSFPMRLDMSGYV--EKHLMPQHYQE 42
R+T+++V + K N F FP +DM+ Y+ +H+ +H Q+
Sbjct: 2026 RFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEHVQD 2068
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 190 0.00091 110 3 11 22 0.40 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 612 (65 KB)
Total size of DFA: 174 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.67u 0.07s 15.74t Elapsed: 00:00:10
Total cpu time: 15.68u 0.07s 15.75t Elapsed: 00:00:10
Start: Thu Aug 15 11:37:13 2013 End: Thu Aug 15 11:37:23 2013