BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14782
(97 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|70909603|emb|CAJ17227.1| ribosomal protein L4e [Biphyllus lunatus]
Length = 404
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 86/92 (93%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GPLVVY KD GL +AFRNIPG++LISV KL+LLKLAPGGHVGRFVIWTES
Sbjct: 199 MRNRRRIQRKGPLVVYSKDDGLRRAFRNIPGIDLISVDKLSLLKLAPGGHVGRFVIWTES 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD+++G+WK+ + +KKGY+LPQPKMANT
Sbjct: 259 AFQKLDSIFGNWKSSSTVKKGYNLPQPKMANT 290
>gi|315115489|gb|ADT80717.1| ribosomal protein L4 [Euphydryas aurinia]
Length = 308
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 87/92 (94%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+QR+GPL++Y KD+GLTKAFRNIPGVE++SV+KLNLLKLAPGGH+GRF+IWT+S
Sbjct: 88 MRNRRRLQRKGPLIIYHKDQGLTKAFRNIPGVEMLSVNKLNLLKLAPGGHLGRFIIWTQS 147
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LDAL+GSWKT + KK ++LPQPKMANT
Sbjct: 148 AFERLDALFGSWKTPSKEKKNFNLPQPKMANT 179
>gi|342356435|gb|AEL28876.1| ribosomal protein L4 [Heliconius melpomene cythera]
Length = 424
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 87/92 (94%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+QR+GPL++Y KD+GL+KAFRNIPGVE++SV+KLNLLKLAPGGHVGRF+IWT+S
Sbjct: 199 MRNRRRVQRKGPLIIYHKDKGLSKAFRNIPGVEMLSVNKLNLLKLAPGGHVGRFIIWTQS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFK+LD L+GSWK+ + LKK ++LPQPKMANT
Sbjct: 259 AFKRLDNLFGSWKSPSKLKKNFNLPQPKMANT 290
>gi|62083421|gb|AAX62435.1| ribosomal protein L4 [Lysiphlebus testaceipes]
Length = 429
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 86/92 (93%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPL++YG+D+GL KAFRNIPGV+L++V+K+NLLKLAPGGHVGRFVIWT+S
Sbjct: 198 MRNRRHVQRRGPLIIYGQDKGLKKAFRNIPGVDLMNVNKMNLLKLAPGGHVGRFVIWTKS 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLDALYG+W+ ++ LKKGY+LP PKMANT
Sbjct: 258 AFDKLDALYGTWRKESTLKKGYNLPYPKMANT 289
>gi|268306392|gb|ACY95317.1| ribosomal protein L4 [Manduca sexta]
Length = 439
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 87/92 (94%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+QR+GPL++Y KD+GL++AFRNIPGVE+++V+KLNLLKLAPGGH+GRF+IWT+S
Sbjct: 199 MRNRRRVQRKGPLIIYHKDKGLSRAFRNIPGVEMLNVNKLNLLKLAPGGHLGRFIIWTQS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LDAL+GSWKT + LKK ++LPQPKMANT
Sbjct: 259 AFDRLDALFGSWKTPSKLKKNFNLPQPKMANT 290
>gi|348019681|gb|AEP43782.1| ribosomal protein L4 [Biston betularia]
Length = 396
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 85/92 (92%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+QR+GPL+VY KD+GLT+AFRNIPGVE+++V KLNLLKLAPGGHVGRF+IWT+S
Sbjct: 199 MRNRRRVQRKGPLIVYHKDQGLTRAFRNIPGVEMLNVDKLNLLKLAPGGHVGRFIIWTQS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LDAL+GSWKT + KK ++LPQPKMANT
Sbjct: 259 AFDRLDALFGSWKTPSKEKKNFNLPQPKMANT 290
>gi|264667431|gb|ACY71301.1| ribosomal protein L4 [Chrysomela tremula]
Length = 207
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 82/91 (90%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRRRIQR+GPLVVY KD+GL +AFRNIPG++L+ V KLNLLKLAPGGHVGRFVIWTESA
Sbjct: 1 RNRRRIQRKGPLVVYHKDQGLRRAFRNIPGIDLVGVDKLNLLKLAPGGHVGRFVIWTESA 60
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F +LD L+G+WKT + KKGY+LPQPKM+NT
Sbjct: 61 FARLDKLFGNWKTPSAEKKGYNLPQPKMSNT 91
>gi|326493892|dbj|BAJ85408.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 82/92 (89%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPL+VY KD+GL KAFRNIPGV+LI++ KLNLL LAPGGHVGRF+IWT+S
Sbjct: 198 MRNRRHVQRRGPLIVYSKDQGLRKAFRNIPGVDLINIRKLNLLHLAPGGHVGRFIIWTQS 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD+LYG+W KA LK GY+LP PKM+NT
Sbjct: 258 AFQKLDSLYGTWDKKATLKSGYNLPFPKMSNT 289
>gi|389608169|dbj|BAM17696.1| ribosomal protein L4 [Papilio xuthus]
Length = 420
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 84/92 (91%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GPL+VY KD+GLT+AFRNIPGV+++ V KLNLLKLAPGGHVGRF+IWT+S
Sbjct: 199 MRNRRRIQRKGPLIVYHKDQGLTRAFRNIPGVDMLKVDKLNLLKLAPGGHVGRFIIWTKS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD L+GSWKT + KK ++LPQPKMANT
Sbjct: 259 AFERLDPLFGSWKTPSKEKKNFNLPQPKMANT 290
>gi|389610681|dbj|BAM18952.1| ribosomal protein L4 [Papilio polytes]
Length = 417
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 84/92 (91%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GPL+VY KD+GLT+AFRNIPGV+++ V KLNLLKLAPGGHVGRF+IWT+S
Sbjct: 199 MRNRRRIQRKGPLIVYHKDQGLTRAFRNIPGVDMLKVDKLNLLKLAPGGHVGRFIIWTKS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD L+GSWKT + KK ++LPQPKMANT
Sbjct: 259 AFERLDPLFGSWKTPSKEKKNFNLPQPKMANT 290
>gi|332372556|gb|AEE61420.1| unknown [Dendroctonus ponderosae]
Length = 407
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 83/92 (90%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GPLVVY +D+GL +AFRNIPG++LIS+ KLNLLKLAPGGHVGRFVIWTES
Sbjct: 199 MRNRRRIQRKGPLVVYHQDQGLRRAFRNIPGIDLISIEKLNLLKLAPGGHVGRFVIWTES 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD ++GSWK + KKGY+LP+ KM+NT
Sbjct: 259 AFQKLDKVFGSWKVASSHKKGYNLPETKMSNT 290
>gi|170280411|gb|ACB12079.1| ribosomal protein L4 [Heliothis virescens]
Length = 426
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 84/92 (91%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+QR+GPL++Y KD+GLT+AFRNIPGVE+++V KLNLLKLAPGGH+GRF IWT+S
Sbjct: 199 MRNRRRVQRKGPLIIYHKDQGLTRAFRNIPGVEMLNVDKLNLLKLAPGGHLGRFCIWTQS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD+L+GSWKT + KK ++LPQPKMANT
Sbjct: 259 AFDRLDSLFGSWKTPSKEKKNFNLPQPKMANT 290
>gi|193704510|ref|XP_001945463.1| PREDICTED: 60S ribosomal protein L4-like isoform 1 [Acyrthosiphon
pisum]
gi|328707724|ref|XP_003243482.1| PREDICTED: 60S ribosomal protein L4-like isoform 2 [Acyrthosiphon
pisum]
Length = 459
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 81/92 (88%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPL+VY KD+GL KAFRNIPGV+LI++ KLNLL LAPGGHVGRF+IWT+S
Sbjct: 198 MRNRRHVQRRGPLIVYSKDQGLRKAFRNIPGVDLINIRKLNLLHLAPGGHVGRFIIWTQS 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W KA LK GY+LP PKM+NT
Sbjct: 258 AFQKLDDLYGTWDKKATLKSGYNLPFPKMSNT 289
>gi|195037353|ref|XP_001990125.1| GH18408 [Drosophila grimshawi]
gi|193894321|gb|EDV93187.1| GH18408 [Drosophila grimshawi]
Length = 401
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 80/92 (86%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR+RRRI R+GPLVVY KD GL +AFRNIPG+E I V KLNLLKLAPGGHVGRFVIWTES
Sbjct: 199 MRDRRRIARKGPLVVYHKDEGLRQAFRNIPGIETICVDKLNLLKLAPGGHVGRFVIWTES 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +L+ L+G+WK + LKKGY+LPQPKMANT
Sbjct: 259 AFSRLNDLFGTWKKPSTLKKGYNLPQPKMANT 290
>gi|56462224|gb|AAV91395.1| ribosomal protein 23 [Lonomia obliqua]
Length = 274
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 85/92 (92%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+ R+GPL++Y KD+GLT++FRNIPGV++++V+KLNLL LAPGGHVGRF+IWT+S
Sbjct: 61 MRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQS 120
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LDA++GSWKT + KK ++LPQPKMANT
Sbjct: 121 AFERLDAIFGSWKTPSKEKKNFNLPQPKMANT 152
>gi|405947249|gb|EKC17795.1| 60S ribosomal protein L4 [Crassostrea gigas]
Length = 290
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 79/92 (85%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGPLV+Y D G+ +AFRNIPG+ LI+VS+LNLLK+APGGHVGRF IWTES
Sbjct: 102 MRNRRRIQKRGPLVIYNSDNGICRAFRNIPGITLINVSRLNLLKIAPGGHVGRFCIWTES 161
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD +YGSWK A KK Y+LP+PKM N+
Sbjct: 162 AFRKLDKIYGSWKKLAADKKDYNLPKPKMTNS 193
>gi|225713364|gb|ACO12528.1| 60S ribosomal protein L4 [Lepeophtheirus salmonis]
Length = 386
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+ GPL+VY KD G+ +AFRNIPG + I V LNLLKLAPGGHVGRF IWTES
Sbjct: 198 MRNRRRIQKLGPLIVYNKDEGVRRAFRNIPGCDTIQVENLNLLKLAPGGHVGRFCIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD LYG+WK + KKG++LPQPKMANT
Sbjct: 258 AFKKLDTLYGTWKKPSSEKKGWNLPQPKMANT 289
>gi|405952344|gb|EKC20167.1| 60S ribosomal protein L4 [Crassostrea gigas]
Length = 383
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 79/92 (85%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGPLV+Y D G+ +AFRNIPG+ LI+VS+LNLLK+APGGHVGRF IWTES
Sbjct: 195 MRNRRRIQKRGPLVIYNSDNGICRAFRNIPGITLINVSRLNLLKIAPGGHVGRFCIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD +YGSWK A KK Y+LP+PKM N+
Sbjct: 255 AFRKLDKIYGSWKKLAADKKDYNLPKPKMTNS 286
>gi|321479331|gb|EFX90287.1| hypothetical protein DAPPUDRAFT_205304 [Daphnia pulex]
Length = 370
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 80/92 (86%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR + GPLV+YG+D+GLTKAFRNIPGV +ISV+KLNL+KLAPGGHVGRF IWTES
Sbjct: 198 MRNRRRTSKLGPLVIYGRDQGLTKAFRNIPGVSMISVNKLNLMKLAPGGHVGRFCIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++L+ALYG+W+ K+ LK Y+LPQP M T
Sbjct: 258 AFQRLNALYGTWRLKSKLKSNYNLPQPIMTGT 289
>gi|318087124|gb|ADV40154.1| putative ribosomal protein L4 [Latrodectus hesperus]
Length = 317
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 81/92 (88%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR GP++VY KD+GLT+AFRNIPG+E I+V KLNLL+LAPGGHVGRFVIWTES
Sbjct: 198 MRNRRRIQRLGPVIVYRKDQGLTRAFRNIPGIETINVEKLNLLRLAPGGHVGRFVIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LDA+YG++K K+ KK Y+LP KMAN
Sbjct: 258 AFRRLDAIYGTYKKKSQRKKNYNLPMHKMANA 289
>gi|195352975|ref|XP_002042986.1| GM16362 [Drosophila sechellia]
gi|194127051|gb|EDW49094.1| GM16362 [Drosophila sechellia]
Length = 411
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%)
Query: 6 RIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
RI RRGPLVVY KD GL +AFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L
Sbjct: 214 RIARRGPLVVYDKDEGLRQAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARL 273
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMANT 92
+ L+G+WK + LKKGY+LPQPKMANT
Sbjct: 274 NDLFGTWKKPSTLKKGYNLPQPKMANT 300
>gi|91083757|ref|XP_971634.1| PREDICTED: similar to ribosomal protein L4e [Tribolium castaneum]
gi|270006788|gb|EFA03236.1| hypothetical protein TcasGA2_TC013168 [Tribolium castaneum]
Length = 404
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 75/82 (91%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD+GL +AFRNIPG++LISV KLNLLKLAPGGHVGRFVIWTESAF++LD L+G
Sbjct: 209 GPLVVYHKDQGLRRAFRNIPGIDLISVEKLNLLKLAPGGHVGRFVIWTESAFQRLDKLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
SWKT + KKGY+LPQPKMANT
Sbjct: 269 SWKTPSAEKKGYNLPQPKMANT 290
>gi|348555421|ref|XP_003463522.1| PREDICTED: 60S ribosomal protein L4-like [Cavia porcellus]
Length = 415
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFRKLDELYGTWRKAATLKSHYNLPMHKMINT 287
>gi|291406673|ref|XP_002719613.1| PREDICTED: ribosomal protein L4-like [Oryctolagus cuniculus]
Length = 292
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+RIQRRGP V+Y +D G+ KAFRNIPG+ L++V+KLN+LKLAPGGHVGRF IWTES
Sbjct: 63 MRNRQRIQRRGPCVIYNEDNGIVKAFRNIPGITLLNVTKLNILKLAPGGHVGRFCIWTES 122
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 123 AFRKLDDLYGTWRKAASLKSNYNLPMHKMLNT 154
>gi|213512258|ref|NP_001135255.1| 60S ribosomal protein L4-A [Salmo salar]
gi|209155410|gb|ACI33937.1| 60S ribosomal protein L4-A [Salmo salar]
gi|221220200|gb|ACM08761.1| 60S ribosomal protein L4-A [Salmo salar]
Length = 388
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D+G+TKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNQDQGVTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFRKLDQLYGTWRKSATLKVDYNLPMHKMTNT 287
>gi|197632149|gb|ACH70798.1| ribosomal protein L4-b [Salmo salar]
Length = 388
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D+G+TKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNQDQGVTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFRKLDQLYGTWRKSATLKVDYNLPMHKMTNT 287
>gi|70909607|emb|CAJ17271.1| ribosomal protein L4e [Micromalthus debilis]
Length = 241
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 82/92 (89%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRI R+GPL+VY +D+GL +AFRNIPG++L++V++LNLLK+APGGHVGRF+IWT+S
Sbjct: 58 MRNRRRINRKGPLIVYHQDQGLRRAFRNIPGIDLMNVNRLNLLKIAPGGHVGRFIIWTQS 117
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD L+G+WK + +KKGY+LPQPK+A+
Sbjct: 118 AFAYLDKLFGTWKASSQVKKGYNLPQPKLASA 149
>gi|432861642|ref|XP_004069666.1| PREDICTED: 60S ribosomal protein L4-A-like [Oryzias latipes]
Length = 369
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D GLTKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNQDAGLTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFRKLDDLYGTWRKPATLKVDYNLPMHKMTNT 287
>gi|379072574|gb|AFC92919.1| ribosomal protein L4, partial [Hymenochirus curtipes]
Length = 282
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTES
Sbjct: 141 MRNRRRIQRKGPCVIYNENNGIVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTES 200
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 201 AFRKLDDLYGTWRKAAKLKADYNLPMHKMTNT 232
>gi|349803801|gb|AEQ17373.1| putative ribosomal l4 [Hymenochirus curtipes]
Length = 304
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTES
Sbjct: 163 MRNRRRIQRKGPCVIYNENNGIVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTES 222
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 223 AFRKLDDLYGTWRKAAKLKADYNLPMHKMTNT 254
>gi|156536919|ref|XP_001608023.1| PREDICTED: 60S ribosomal protein L4-like [Nasonia vitripennis]
Length = 431
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 77/82 (93%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYG D+G+ KAFRNIPGV+L++++K+NLLKLAPGGHVGRFVIWT+SAF+KLDALYG
Sbjct: 208 GPLIVYGNDQGIRKAFRNIPGVDLMNINKINLLKLAPGGHVGRFVIWTKSAFEKLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ +A LKKGY+LP PKMANT
Sbjct: 268 TWRKEAELKKGYNLPMPKMANT 289
>gi|125773997|ref|XP_001358257.1| GA18932 [Drosophila pseudoobscura pseudoobscura]
gi|54637993|gb|EAL27395.1| GA18932 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 73/82 (89%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYHKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFSRLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK+ A LKKGY+LPQPKMANT
Sbjct: 269 TWKSPATLKKGYNLPQPKMANT 290
>gi|194746355|ref|XP_001955646.1| GF18868 [Drosophila ananassae]
gi|190628683|gb|EDV44207.1| GF18868 [Drosophila ananassae]
Length = 401
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYHKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFSRLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK A LKKGY+LPQPKMANT
Sbjct: 269 TWKKSATLKKGYNLPQPKMANT 290
>gi|195453977|ref|XP_002074029.1| GK12825 [Drosophila willistoni]
gi|194170114|gb|EDW85015.1| GK12825 [Drosophila willistoni]
Length = 427
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 235 GPLVVYHKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFSRLNDLFG 294
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK A LKKGY+LPQPKMANT
Sbjct: 295 TWKKPATLKKGYNLPQPKMANT 316
>gi|195108985|ref|XP_001999073.1| GI24311 [Drosophila mojavensis]
gi|193915667|gb|EDW14534.1| GI24311 [Drosophila mojavensis]
Length = 401
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E ISV KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETISVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|225706604|gb|ACO09148.1| 60S ribosomal protein L4-A [Osmerus mordax]
Length = 376
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+TKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNQDAGVTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ + LK Y+LP KM NT
Sbjct: 256 AFRKLDELYGTWRKPSTLKVDYNLPMHKMTNT 287
>gi|291222349|ref|XP_002731171.1| PREDICTED: ribosomal protein L4-like [Saccoglossus kowalevskii]
Length = 400
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 76/92 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR GP ++Y +D GLT+AFRNIPG+ L++VSKLNLL++APGGHVGRF IWTES
Sbjct: 198 MRNRRRIQRLGPCIIYDQDNGLTRAFRNIPGITLLNVSKLNLLRVAPGGHVGRFCIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+WK + K Y+LP PKM T
Sbjct: 258 AFRKLDNLYGTWKKPSKEKNNYNLPMPKMTYT 289
>gi|195395011|ref|XP_002056130.1| GJ10395 [Drosophila virilis]
gi|194142839|gb|EDW59242.1| GJ10395 [Drosophila virilis]
Length = 401
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E ISV KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYHKDEGLRKAFRNIPGIETISVDKLNLLKLAPGGHVGRFVIWTESAFSRLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|307205264|gb|EFN83644.1| 60S ribosomal protein L4 [Harpegnathos saltator]
Length = 424
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 77/82 (93%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYGKD GL KAFRNIPGV+L++++K+NLLK+APGGHVGRFVIWT+SAF++LDALYG
Sbjct: 207 GPLIVYGKDEGLCKAFRNIPGVDLMNINKMNLLKMAPGGHVGRFVIWTKSAFEQLDALYG 266
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LKKGY+LP PKMANT
Sbjct: 267 TWRKESQLKKGYNLPFPKMANT 288
>gi|1350686|sp|P49165.1|RL4_URECA RecName: Full=60S ribosomal protein L4; AltName: Full=L1
gi|929961|gb|AAA74021.1| ribosomal protein [Urechis caupo]
Length = 386
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR IQRRGPL++YG D G+++AFRNIPG+ L++V++LNLL +APGGHVGRF IWTES
Sbjct: 195 LRNRRAIQRRGPLIIYGTDNGISRAFRNIPGITLVNVNRLNLLSMAPGGHVGRFCIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFK+LD +YG+WK + K Y+LP PKM NT
Sbjct: 255 AFKQLDNIYGTWKRPSAEKSHYNLPMPKMTNT 286
>gi|195143979|ref|XP_002012974.1| GL23641 [Drosophila persimilis]
gi|194101917|gb|EDW23960.1| GL23641 [Drosophila persimilis]
Length = 401
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYHKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFSRLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK A LKKGY+LPQPKMANT
Sbjct: 269 TWKRPATLKKGYNLPQPKMANT 290
>gi|38047527|gb|AAR09666.1| similar to Drosophila melanogaster RpL1, partial [Drosophila
yakuba]
Length = 236
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 44 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 103
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 104 TWKKPSTLKKGYNLPQPKMANT 125
>gi|40889023|gb|AAA60281.2| ribosomal protein L4 [Homo sapiens]
Length = 426
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR IQRRGP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTES
Sbjct: 196 MRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 255 AFRKLDELYGTWRKAASLKSNYNLPMHKMINT 286
>gi|403303941|ref|XP_003942573.1| PREDICTED: 60S ribosomal protein L4-like [Saimiri boliviensis
boliviensis]
Length = 427
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRN RRIQ RGP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVG F IWTES
Sbjct: 196 MRNCRRIQSRGPCIIYDEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGHFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFQKLDELYGTWRKAASLKSNYNLPMHKMINT 287
>gi|194907117|ref|XP_001981490.1| GG11580 [Drosophila erecta]
gi|195503641|ref|XP_002098736.1| RpL4 [Drosophila yakuba]
gi|190656128|gb|EDV53360.1| GG11580 [Drosophila erecta]
gi|194184837|gb|EDW98448.1| RpL4 [Drosophila yakuba]
Length = 401
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|24650747|ref|NP_524538.2| ribosomal protein L4 [Drosophila melanogaster]
gi|56405290|sp|P09180.2|RL4_DROME RecName: Full=60S ribosomal protein L4; AltName: Full=L1
gi|10726816|gb|AAG22173.1| ribosomal protein L4 [Drosophila melanogaster]
gi|17862306|gb|AAL39630.1| LD21756p [Drosophila melanogaster]
gi|220946742|gb|ACL85914.1| RpL4-PA [synthetic construct]
gi|220956346|gb|ACL90716.1| RpL4-PA [synthetic construct]
Length = 401
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|242018771|ref|XP_002429847.1| 60S ribosomal protein L4, putative [Pediculus humanus corporis]
gi|212514865|gb|EEB17109.1| 60S ribosomal protein L4, putative [Pediculus humanus corporis]
Length = 671
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 75/82 (91%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY K++G+ +AFRNIPGV+LI+VSKL+LLK+APGGHVGRFVIWTESAFK L+ALYG
Sbjct: 208 GPLIVYSKNQGIRRAFRNIPGVDLINVSKLDLLKVAPGGHVGRFVIWTESAFKTLNALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
SW + +KKGY+LPQPKM+NT
Sbjct: 268 SWNKASKMKKGYNLPQPKMSNT 289
>gi|195359668|ref|XP_002045412.1| GM24605 [Drosophila sechellia]
gi|194122035|gb|EDW44078.1| GM24605 [Drosophila sechellia]
Length = 216
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL +AFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 24 GPLVVYDKDEGLRQAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 83
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 84 TWKKPSTLKKGYNLPQPKMANT 105
>gi|72005577|ref|XP_783473.1| PREDICTED: 60S ribosomal protein L4-B-like [Strongylocentrotus
purpuratus]
Length = 385
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 76/95 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR ++R GPLVVY +D G+T+AFRNIPGV L+ VS+LNLL+LAPGGHVGRF +WTES
Sbjct: 198 MRNRRFVRRLGPLVVYDQDNGITRAFRNIPGVTLLQVSRLNLLRLAPGGHVGRFCVWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTKQR 95
AF KLD LYG+WK + K ++LP PKM NT R
Sbjct: 258 AFNKLDGLYGTWKKASSEKSNWNLPMPKMTNTDLR 292
>gi|61654616|gb|AAX48834.1| L4/L1 [Suberites domuncula]
Length = 357
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QR+GPLV+Y +D+G+T+AFRN+PGVEL+ V ++NLL LAPGGH+GRF IW+
Sbjct: 193 MRNRRYVQRKGPLVIYNEDQGITRAFRNLPGVELLKVDRMNLLLLAPGGHIGRFCIWSRG 252
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLDALYG+WK K+ +K Y+LP+PKM T
Sbjct: 253 AFEKLDALYGTWKKKSTMKVNYNLPRPKMIQT 284
>gi|195574444|ref|XP_002105199.1| GD21356 [Drosophila simulans]
gi|194201126|gb|EDX14702.1| GD21356 [Drosophila simulans]
Length = 401
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL +AFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRQAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|8488|emb|CAA31759.1| unnamed protein product [Drosophila melanogaster]
Length = 407
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLN+LKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>gi|442760253|gb|JAA72285.1| Putative ribosomal protein [Ixodes ricinus]
Length = 417
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR GPLVV+ D G+T+AFRNIPGV+ + V KLNLLK+APGGHVGRFVIWTES
Sbjct: 198 MRNRRRIQRLGPLVVFEADNGITRAFRNIPGVDTLRVDKLNLLKMAPGGHVGRFVIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+++ + KK +SLP+P+M N+
Sbjct: 258 AFRRLDKLYGTYRKPSSEKKNFSLPKPQMTNS 289
>gi|241567444|ref|XP_002402322.1| ribosomal protein L4, putative [Ixodes scapularis]
gi|215500018|gb|EEC09512.1| ribosomal protein L4, putative [Ixodes scapularis]
Length = 417
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR GPLVV+ D G+T+AFRNIPGV+ + V KLNLLK+APGGHVGRFVIWTES
Sbjct: 198 MRNRRRIQRLGPLVVFEADNGITRAFRNIPGVDTLRVDKLNLLKMAPGGHVGRFVIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+++ + KK +SLP+P+M N+
Sbjct: 258 AFRRLDKLYGTYRKPSSEKKNFSLPKPQMTNS 289
>gi|289739703|gb|ADD18599.1| ribosomal protein L4 [Glossina morsitans morsitans]
Length = 405
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL++Y KD GL +AFRNIPG+E + V K+NLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLIIYFKDEGLRRAFRNIPGIETMCVDKMNLLKLAPGGHVGRFVIWTESAFARLNELFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK+++ LKKGY+LPQPKMANT
Sbjct: 269 TWKSQSTLKKGYNLPQPKMANT 290
>gi|332024885|gb|EGI65073.1| 60S ribosomal protein L4 [Acromyrmex echinatior]
Length = 364
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 76/82 (92%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYG+D+G+ KAFRNIPGV L++++K+NLLKLAPGGHVGRFVIWT+SAF +LDALYG
Sbjct: 152 GPLIVYGQDQGIRKAFRNIPGVSLMNINKMNLLKLAPGGHVGRFVIWTKSAFDQLDALYG 211
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LKKGY+LP PKMANT
Sbjct: 212 TWRKESQLKKGYNLPFPKMANT 233
>gi|322784371|gb|EFZ11342.1| hypothetical protein SINV_03492 [Solenopsis invicta]
Length = 424
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 76/82 (92%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYG D+G+ KAFRNIPGV L++++K+NLLKLAPGGHVGRFVIWT+SAF++LDALYG
Sbjct: 208 GPLIVYGHDQGIRKAFRNIPGVSLMNINKMNLLKLAPGGHVGRFVIWTKSAFEQLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LKKGY+LP PKMANT
Sbjct: 268 TWRKESQLKKGYNLPFPKMANT 289
>gi|320163444|gb|EFW40343.1| ribosomal protein L4 [Capsaspora owczarzaki ATCC 30864]
Length = 397
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 76/91 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QR GP++VY D G+T+AFRNIPGVELI V +LNLLKLAPGGH+GRF+IWT++
Sbjct: 196 MRNRRHVQRLGPMIVYRNDNGITRAFRNIPGVELIQVDRLNLLKLAPGGHLGRFLIWTQA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LDALYG+ + + LKK Y+LPQ M N
Sbjct: 256 AFERLDALYGTGRKASALKKDYNLPQATMVN 286
>gi|260794820|ref|XP_002592405.1| hypothetical protein BRAFLDRAFT_118418 [Branchiostoma floridae]
gi|229277624|gb|EEN48416.1| hypothetical protein BRAFLDRAFT_118418 [Branchiostoma floridae]
Length = 394
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +++RGP ++Y KD G+ +AFRNIPG+ L+ V KLNLLK+APGGH+GRF+IWTES
Sbjct: 198 MRNRRFVKKRGPCIIYDKDNGIVRAFRNIPGITLLPVDKLNLLKIAPGGHLGRFLIWTES 257
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A +KLDALYG+W+ + LKK ++LP PKM NT
Sbjct: 258 AIQKLDALYGTWRKPSTLKKDFNLPMPKMLNT 289
>gi|94733357|emb|CAK04707.1| ribosomal protein L4 [Danio rerio]
Length = 182
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 76/92 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+T+AFRNIPG+ L SVS+L+LLKLAPGGH+GRF IWTE
Sbjct: 73 MRNRRRIQRKGPCIIYNEDNGVTRAFRNIPGITLQSVSRLDLLKLAPGGHIGRFCIWTEG 132
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ + LK Y+LP KM+ T
Sbjct: 133 AFRKLDDLYGTWRKASTLKVDYNLPMHKMSIT 164
>gi|124782963|gb|ABN14894.1| ribosomal protein L4 [Taenia asiatica]
Length = 265
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR I +RGP++VY KD G+T+AFRNIPG+ L++V LN+LKLAPGGH+GRF IWTE
Sbjct: 167 MRNRRHIMKRGPIIVYKKDDGITRAFRNIPGITLLNVKYLNILKLAPGGHMGRFTIWTEG 226
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD LYG+WKT + +KKG+ LP KM NT
Sbjct: 227 AFRTLDKLYGTWKTGSTMKKGFHLPSSKMTNT 258
>gi|350415276|ref|XP_003490589.1| PREDICTED: 60S ribosomal protein L4-like [Bombus impatiens]
Length = 434
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 76/82 (92%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYG+D+G+ KAFRNIPGV+L++++K+NLLKLAPGGHVGRFVIWT+SAF+KLDALYG
Sbjct: 208 GPLIVYGQDQGIRKAFRNIPGVDLMNINKMNLLKLAPGGHVGRFVIWTKSAFEKLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LK Y+LP PKMANT
Sbjct: 268 TWRKESQLKADYNLPYPKMANT 289
>gi|318068006|ref|NP_001187034.1| ribosomal protein L4 [Ictalurus punctatus]
gi|15293869|gb|AAK95127.1|AF401555_1 ribosomal protein L4 [Ictalurus punctatus]
Length = 385
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRN RRIQR+GP ++Y +D G+TKAFRNIPGV + V+KLNLLKLAPGGH+GRF IWTE+
Sbjct: 196 MRNGRRIQRKGPCIIYNEDNGVTKAFRNIPGVTMQRVTKLNLLKLAPGGHIGRFCIWTEA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ + LK Y+LP KM NT
Sbjct: 256 AFRKLDDLYGTWRKPSSLKVDYNLPMHKMTNT 287
>gi|346466161|gb|AEO32925.1| hypothetical protein [Amblyomma maculatum]
Length = 443
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR GPL++Y D GLT+AFRNIPGV+ + V +LNLLK+APGGHVGRFVIWTE+
Sbjct: 221 MRNRRRIQRLGPLIIYEADHGLTRAFRNIPGVDTLRVDQLNLLKVAPGGHVGRFVIWTEA 280
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD +YG++K + KK ++LP+P+M N+
Sbjct: 281 AFRRLDKIYGTYKKPSAEKKSFNLPKPQMTNS 312
>gi|340725537|ref|XP_003401125.1| PREDICTED: 60S ribosomal protein L4-like [Bombus terrestris]
Length = 434
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 76/82 (92%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VYG+D+G+ KAFRNIPGV+L++++K+NLLKLAPGGHVGRFVIWT+SAF+KLDALYG
Sbjct: 208 GPLIVYGQDQGIRKAFRNIPGVDLMNINKMNLLKLAPGGHVGRFVIWTKSAFEKLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LK Y+LP PKMANT
Sbjct: 268 TWRKESQLKADYNLPYPKMANT 289
>gi|54261775|ref|NP_998272.1| 60S ribosomal protein L4 [Danio rerio]
gi|29436531|gb|AAH49520.1| Ribosomal protein L4 [Danio rerio]
gi|45767784|gb|AAH67580.1| Ribosomal protein L4 [Danio rerio]
gi|94733359|emb|CAK04709.1| ribosomal protein L4 [Danio rerio]
Length = 375
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 76/92 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+T+AFRNIPG+ L SVS+L+LLKLAPGGH+GRF IWTE
Sbjct: 196 MRNRRRIQRKGPCIIYNEDNGVTRAFRNIPGITLQSVSRLDLLKLAPGGHIGRFCIWTEG 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ + LK Y+LP KM+ T
Sbjct: 256 AFRKLDDLYGTWRKASTLKVDYNLPMHKMSIT 287
>gi|296476944|tpg|DAA19059.1| TPA: 60S ribosomal protein L4-like [Bos taurus]
Length = 422
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR RIQRRGP ++Y +D G+ KAFR+IPG+ L++VSKLN+LKLAPGG+VGRF IWTES
Sbjct: 196 MRNRHRIQRRGPCIIYNEDNGIIKAFRSIPGITLLNVSKLNILKLAPGGYVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W A LK Y+ P KM NT
Sbjct: 256 AFRKLDELYGTWCKAASLKSNYNHPMHKMLNT 287
>gi|213403210|ref|XP_002172377.1| 60S ribosomal protein L4 [Schizosaccharomyces japonicus yFS275]
gi|212000424|gb|EEB06084.1| 60S ribosomal protein L2 [Schizosaccharomyces japonicus yFS275]
Length = 363
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPLVVY +D G+TKAFRNIPGVEL++V +LNLL+LAPGGH+GRFV+WT+S
Sbjct: 196 MRNRRYVQRRGPLVVYNEDAGITKAFRNIPGVELVNVRRLNLLQLAPGGHLGRFVMWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LDAL+GS + LKK Y LP MAN
Sbjct: 256 AFGLLDALFGSATEASELKKNYFLPTNIMANA 287
>gi|198425705|ref|XP_002123535.1| PREDICTED: similar to ribosomal protein L4 [Ciona intestinalis]
Length = 309
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +RGP ++Y KD G++KAFRNIPG+ LISV +LNLLK+APGGHVGRF+IWT+S
Sbjct: 145 MRNRRHTMKRGPCIIYDKDEGISKAFRNIPGITLISVDRLNLLKIAPGGHVGRFLIWTQS 204
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A K+LD +YG+W+ A K Y+LP PKM T
Sbjct: 205 ALKRLDGIYGTWRKPAVEKSAYNLPMPKMTCT 236
>gi|383858571|ref|XP_003704774.1| PREDICTED: 60S ribosomal protein L4-like [Megachile rotundata]
Length = 448
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 76/82 (92%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL++YG+D+G+ KAFRNIPG++L++++K+NLLKLAPGGH+GRFVIWT+SAF+KLDALYG
Sbjct: 208 GPLIIYGQDQGIRKAFRNIPGIDLMNINKMNLLKLAPGGHIGRFVIWTKSAFEKLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LK Y+LP PKMANT
Sbjct: 268 TWRKESQLKADYNLPFPKMANT 289
>gi|164690933|dbj|BAF98649.1| ribosomal protein L4 [Solea senegalensis]
Length = 369
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 76/92 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+ KAFRNIPG+ L +V+KLNLL+LAPGGH+GRF+IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNQDAGIIKAFRNIPGITLQNVNKLNLLRLAPGGHIGRFLIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+ + + LK Y+LP KM NT
Sbjct: 256 AFRKLDELYGTGRKPSSLKVDYNLPMHKMTNT 287
>gi|70909605|emb|CAJ17228.1| ribosomal protein L4e [Eucinetus sp. APV-2005]
Length = 432
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+GL +AFRNIPG+ELI V +LNLLKLAPGGHVGRF+IWT+SAF+KLD ++G
Sbjct: 209 GPLIVYHEDQGLRRAFRNIPGIELIHVDRLNLLKLAPGGHVGRFIIWTQSAFEKLDKIFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
SWK KKGY+LPQPKMANT
Sbjct: 269 SWKKTFLPKKGYNLPQPKMANT 290
>gi|112982800|ref|NP_001037129.1| ribosomal protein L4 [Bombyx mori]
gi|54609195|gb|AAV34813.1| ribosomal protein L4 [Bombyx mori]
Length = 428
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 85/92 (92%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GPL+++ KD+GLT+AFRNIPGVEL++V+KLNLLKLAPGGH+GRFVIWT+S
Sbjct: 199 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVELLNVNKLNLLKLAPGGHLGRFVIWTQS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD L+GSWKT + KK ++LPQPKMANT
Sbjct: 259 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 290
>gi|443690089|gb|ELT92311.1| hypothetical protein CAPTEDRAFT_166390 [Capitella teleta]
Length = 270
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 7 IQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
+Q+RGPLV+Y +D GL KAFRNIPG+ + V KLNLLK+APGGHVGRF IWTESAFKKLD
Sbjct: 108 VQKRGPLVIYNQDNGLVKAFRNIPGITTLPVDKLNLLKIAPGGHVGRFCIWTESAFKKLD 167
Query: 67 ALYGSWKTKAPLKKGYSLPQPKMANT 92
LYG+WK ++ K GY+LP KM +T
Sbjct: 168 GLYGTWKKRSSEKTGYNLPMSKMTST 193
>gi|443694241|gb|ELT95434.1| hypothetical protein CAPTEDRAFT_160830 [Capitella teleta]
Length = 412
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 7 IQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
+Q+RGPLV+Y +D GL KAFRNIPG+ + V KLNLLK+APGGHVGRF IWTESAFKKLD
Sbjct: 201 VQKRGPLVIYNQDNGLVKAFRNIPGITTLPVDKLNLLKIAPGGHVGRFCIWTESAFKKLD 260
Query: 67 ALYGSWKTKAPLKKGYSLPQPKMANT 92
LYG+WK ++ K GY+LP KM +T
Sbjct: 261 GLYGTWKKRSSEKTGYNLPMSKMTST 286
>gi|440902930|gb|ELR53660.1| hypothetical protein M91_13586 [Bos grunniens mutus]
Length = 329
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELIS-VSKLNLLKLAPGGHVGRFVIWTE 59
MRN R IQ RGP + Y +D G+ KAFRNIPG+ L++ VSKLN+LKLAPGGHVGRF IWTE
Sbjct: 102 MRNHRHIQHRGPCITYNEDNGIIKAFRNIPGITLLNLVSKLNILKLAPGGHVGRFCIWTE 161
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD LYG+W A LK Y+L KM NT
Sbjct: 162 SAFQKLDELYGTWHKAASLKSNYNLLMHKMLNT 194
>gi|294878601|ref|XP_002768418.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|239870846|gb|EER01136.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
Length = 271
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLVVY +D GLTKAFRNIPG+EL V +LNLL++APGG GRF+IWT+
Sbjct: 73 MRNRRYVMRRGPLVVYAEDDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQP 132
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +L L+GS+++ A LK GY LP+P M N
Sbjct: 133 AFDRLQQLFGSYRSGAALKSGYRLPRPLMTNA 164
>gi|358056952|dbj|GAA97302.1| hypothetical protein E5Q_03980 [Mixia osmundae IAM 14324]
Length = 371
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 75/91 (82%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPL+VY +D G+++AF N+PGVE+++V +LNLL+LAPGGH+GRF+IWTE A
Sbjct: 196 RNRRHTQRRGPLIVYNEDNGISRAFGNVPGVEVVNVRRLNLLQLAPGGHLGRFIIWTEGA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F LD ++G++ A LKK Y LPQPK++N+
Sbjct: 256 FAVLDEVFGTYDKTATLKKDYHLPQPKISNS 286
>gi|66525285|ref|XP_392071.2| PREDICTED: 60S ribosomal protein L4 isoform 1 [Apis mellifera]
Length = 429
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 74/82 (90%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+G+ KAFRNIPGV+L++++K+NLLKLAPGGHVGRFVIWT+SAF+KLDALYG
Sbjct: 208 GPLIVYHQDQGIRKAFRNIPGVDLMNINKMNLLKLAPGGHVGRFVIWTKSAFEKLDALYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LK Y+LP PKM NT
Sbjct: 268 TWRKESQLKADYNLPFPKMMNT 289
>gi|308812566|ref|XP_003083590.1| Ribosomal protein RPL1/RPL2/RL4L4 (ISS) [Ostreococcus tauri]
gi|116055471|emb|CAL58139.1| Ribosomal protein RPL1/RPL2/RL4L4 (ISS) [Ostreococcus tauri]
Length = 404
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPLVVY +D G+T+AFRNIPGVEL SV +L LL LAPGGHVGRF+IWT+S
Sbjct: 199 MRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD+++G+ +K+ KKG+ P MA T
Sbjct: 259 AFEKLDSIFGTSTSKSASKKGWKPPTNIMAQT 290
>gi|294930021|ref|XP_002779465.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|239888585|gb|EER11260.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLVVY +D GLTKAFRNIPG+EL V +LNLL++APGG GRF+IWT+
Sbjct: 56 MRNRRYVMRRGPLVVYAEDDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQP 115
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +L L+GS+++ A LK GY LP+P M N
Sbjct: 116 AFDRLQQLFGSYRSGAALKSGYRLPRPLMTNA 147
>gi|380024667|ref|XP_003696114.1| PREDICTED: 60S ribosomal protein L4-like [Apis florea]
Length = 419
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 74/82 (90%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+G+ KAFRNIPGV+L++++K+NLLKLAPGGHVGRFVIWT+SAF+KLDALYG
Sbjct: 196 GPLIVYHQDQGIRKAFRNIPGVDLMNINKMNLLKLAPGGHVGRFVIWTKSAFEKLDALYG 255
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LK Y+LP PKM NT
Sbjct: 256 TWRKESQLKADYNLPFPKMMNT 277
>gi|307181855|gb|EFN69295.1| 60S ribosomal protein L4 [Camponotus floridanus]
Length = 551
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 74/82 (90%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+G+ KAFRNIPG+ L++++K+NLLKLAPGGHVGRFVIWT+SAF LD+LYG
Sbjct: 208 GPLIVYNQDQGIRKAFRNIPGISLMNINKMNLLKLAPGGHVGRFVIWTKSAFGLLDSLYG 267
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ LKKGY+LP PKMANT
Sbjct: 268 TWRKESQLKKGYNLPFPKMANT 289
>gi|164655483|ref|XP_001728871.1| hypothetical protein MGL_4038 [Malassezia globosa CBS 7966]
gi|159102757|gb|EDP41657.1| hypothetical protein MGL_4038 [Malassezia globosa CBS 7966]
Length = 373
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 74/89 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y +D G+ KAFRN+PGVE+ SV LNLL+LAPGGH+GRFVIWTE
Sbjct: 194 LRNRRHTQRRGPLVIYNQDNGIVKAFRNLPGVEIASVHSLNLLQLAPGGHLGRFVIWTED 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
AFK+LD ++G++++ + +KKG+ LP K+
Sbjct: 254 AFKQLDKIFGTYESASEVKKGFHLPSAKI 282
>gi|294882565|ref|XP_002769741.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|294924292|ref|XP_002778799.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|239873490|gb|EER02459.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|239887589|gb|EER10594.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
Length = 393
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLVVY +D GLTKAFRNIPG+EL V +LNLL++APGG GRF+IWT+
Sbjct: 195 MRNRRYVMRRGPLVVYAEDDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQP 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +L L+GS+++ A LK GY LP+P M N
Sbjct: 255 AFDRLQQLFGSYRSGAALKSGYRLPRPLMTNA 286
>gi|225320687|dbj|BAH29739.1| ribosomal protein L4 [Dicyema japonicum]
Length = 345
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 74/92 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLV+Y +D G+TKAFRN+PGVEL+ V KLNL APGGHVGRFVIWT+S
Sbjct: 194 MRNRRHVLRRGPLVIYKEDNGITKAFRNLPGVELLPVEKLNLRVFAPGGHVGRFVIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A + LDALYG+W + + +K ++LPQP M+ T
Sbjct: 254 AMETLDALYGTWTSPSSMKVDWNLPQPIMSIT 285
>gi|212723450|ref|NP_001132773.1| uncharacterized protein LOC100194262 [Zea mays]
gi|194695362|gb|ACF81765.1| unknown [Zea mays]
Length = 386
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 72/91 (79%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPLVVY GL KAFRNIPGVEL +V +LNLL+LAPGGH+GRFVIWT+SA
Sbjct: 202 RNRRYTTRRGPLVVYANANGLEKAFRNIPGVELANVERLNLLQLAPGGHLGRFVIWTKSA 261
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLDA+YG++ K+ K GYSLP+ M N
Sbjct: 262 FEKLDAIYGTYSKKSTEKTGYSLPRHIMNNA 292
>gi|37779080|gb|AAP20200.1| ribosomal protein L4 [Pagrus major]
Length = 367
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+TKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNQDAGVTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LKKGY+LP KM NT
Sbjct: 266 TWRKPASLKKGYNLPMHKMTNT 287
>gi|403284778|ref|XP_003933732.1| PREDICTED: 60S ribosomal protein L4-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 345
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 124 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFQKLDELYG 183
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+T A LK Y+LP KM NT
Sbjct: 184 TWRTAASLKSNYNLPMHKMINT 205
>gi|255568434|ref|XP_002525191.1| 60S ribosomal protein L4, putative [Ricinus communis]
gi|223535488|gb|EEF37157.1| 60S ribosomal protein L4, putative [Ricinus communis]
Length = 410
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 205 MRNRRYISRKGPLIVYGSEGAKLVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTK 264
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS++ + KKGY LP+ KM N
Sbjct: 265 SAFEKLDSIYGSFQKSSEKKKGYVLPRSKMVNA 297
>gi|145354643|ref|XP_001421589.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581827|gb|ABO99882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 387
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPLVVY +D G+T+AFRNIPGVEL SV +L LL LAPGGHVGRF+IWT+S
Sbjct: 192 MRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKS 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLD+++G+ K+ KKG+ P MA T
Sbjct: 252 AFDKLDSIFGTASKKSASKKGWKPPTNIMAQT 283
>gi|357111266|ref|XP_003557435.1| PREDICTED: 60S ribosomal protein L4-1-like [Brachypodium
distachyon]
Length = 404
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKLD +YGS +T + KKG+ LP+PKMAN
Sbjct: 259 SAFKKLDEVYGSLETPSLKKKGFVLPRPKMANA 291
>gi|403284776|ref|XP_003933731.1| PREDICTED: 60S ribosomal protein L4-like isoform 1 [Saimiri
boliviensis boliviensis]
Length = 290
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 69 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFQKLDELYG 128
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+T A LK Y+LP KM NT
Sbjct: 129 TWRTAASLKSNYNLPMHKMINT 150
>gi|301111776|ref|XP_002904967.1| 60S ribosomal protein L4 [Phytophthora infestans T30-4]
gi|262095297|gb|EEY53349.1| 60S ribosomal protein L4 [Phytophthora infestans T30-4]
Length = 387
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPL+VY G KAFRNIPGVEL V +LNLL+LAPGGHVGRF+IWT+SA
Sbjct: 202 RNRRYTTRRGPLIVYANGNGAEKAFRNIPGVELAHVERLNLLQLAPGGHVGRFIIWTKSA 261
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F+KLDALYG++ K+ K GY LP+ +M N
Sbjct: 262 FQKLDALYGTYTKKSASKAGYQLPRHQMNN 291
>gi|449448709|ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
Length = 405
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 200 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS++ + KKGY LP+ KM N
Sbjct: 260 SAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNA 292
>gi|356537469|ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
Length = 371
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I RRGPL+VYG + KAFRN+PGVE+ +V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 200 MRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAPGGHLGRFVVWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+PKM N+
Sbjct: 260 SAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNS 292
>gi|356537467|ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
Length = 405
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I RRGPL+VYG + KAFRN+PGVE+ +V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 200 MRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAPGGHLGRFVVWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+PKM N+
Sbjct: 260 SAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNS 292
>gi|356572399|ref|XP_003554356.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
Length = 430
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRNIPGVE+ +V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 225 MRNRRHISRKGPLIVYGTEGAKVVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFIIWTK 284
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+P+M N+
Sbjct: 285 SAFEKLDSIYGSFHKASEKKKGYLLPRPRMVNS 317
>gi|156353812|ref|XP_001623105.1| predicted protein [Nematostella vectensis]
gi|156209766|gb|EDO31005.1| predicted protein [Nematostella vectensis]
Length = 358
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 74/92 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + R+GPL++Y D+GL +AFRN+PGVEL V +LNLLKL PGGH+GRF+IW++
Sbjct: 194 MRNRRTVMRKGPLIIYNNDQGLRQAFRNLPGVELQHVDRLNLLKLCPGGHLGRFIIWSQG 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLDA+YG+WK + K ++LP+P M N+
Sbjct: 254 AFEKLDAIYGTWKKASTEKANFNLPRPIMLNS 285
>gi|159473354|ref|XP_001694804.1| ribosomal protein L4, component of cytosolic 80S ribosome and 60S
large subunit [Chlamydomonas reinhardtii]
gi|158276616|gb|EDP02388.1| ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 410
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 75/91 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + R+GPLVV+ D G++KAFRN+PGVE+ SV +LNLL+LAPGGH+GRF IW++S
Sbjct: 196 MRNRRYVMRKGPLVVFANDEGISKAFRNLPGVEVTSVDRLNLLQLAPGGHLGRFCIWSKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF+KLD ++G+ T++ KKGY LP+ MAN
Sbjct: 256 AFEKLDKVFGTATTESEQKKGYKLPRACMAN 286
>gi|312385773|gb|EFR30192.1| hypothetical protein AND_00368 [Anopheles darlingi]
Length = 429
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y KD GL KAFRNIPGV+ ++V KLNLLKLAPGGHVGR +WTESAF KLD +YG
Sbjct: 209 GPLVIYAKDEGLRKAFRNIPGVDTMNVFKLNLLKLAPGGHVGRLCVWTESAFAKLDEIYG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK K+ KK Y+LP P MANT
Sbjct: 269 TWKEKSKYKKDYNLPTPIMANT 290
>gi|327285147|ref|XP_003227296.1| PREDICTED: 60S ribosomal protein L4-like [Anolis carolinensis]
Length = 311
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 70/82 (85%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP +++ +D G+ KAFRNIPG+ +++V+KLN+L+LAPGGHVGRF IWTES
Sbjct: 229 MRNRRRIQRKGPCIIFNEDNGIIKAFRNIPGITVLNVNKLNILRLAPGGHVGRFCIWTES 288
Query: 61 AFKKLDALYGSWKTKAPLKKGY 82
AF+KLD LYG+W+ A LK Y
Sbjct: 289 AFRKLDELYGTWRKPATLKSNY 310
>gi|328768374|gb|EGF78420.1| hypothetical protein BATDEDRAFT_17297 [Batrachochytrium
dendrobatidis JAM81]
Length = 370
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y + G+ +AF NIPGVE SV+ LN+L+LAPGGHVGRFVIWT++
Sbjct: 194 LRNRRHTQRRGPLVIYDNNEGIARAFSNIPGVETCSVNALNILQLAPGGHVGRFVIWTQA 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF+KLDALYG+ T + LKK Y+LP ++N
Sbjct: 254 AFEKLDALYGTASTPSQLKKDYTLPVSIVSN 284
>gi|395734162|ref|XP_003776365.1| PREDICTED: 60S ribosomal protein L4-like [Pongo abelii]
Length = 427
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK YSLP KM NT
Sbjct: 266 TWRKAASLKSNYSLPMHKMINT 287
>gi|418731475|gb|AFX67037.1| 60S ribosomal protein L1 [Solanum tuberosum]
Length = 407
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEICHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA++KLD +YGS+ + KKGY LP+PKM N
Sbjct: 262 SAYEKLDEIYGSFDKPSQKKKGYLLPRPKMVNA 294
>gi|256081834|ref|XP_002577172.1| 60S ribosomal protein L4 [Schistosoma mansoni]
Length = 385
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+V+Y KD G+++AFRNIPG+ LI+V LNLLKLAPGGH+GR IW++S
Sbjct: 206 MRNRRRIQKRGPIVIYKKDDGISRAFRNIPGITLINVKALNLLKLAPGGHMGRLAIWSDS 265
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LD LYG+ KT + K G+ LP KM N
Sbjct: 266 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTN 296
>gi|353232081|emb|CCD79436.1| putative 60s ribosomal protein L4 [Schistosoma mansoni]
Length = 375
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+V+Y KD G+++AFRNIPG+ LI+V LNLLKLAPGGH+GR IW++S
Sbjct: 196 MRNRRRIQKRGPIVIYKKDDGISRAFRNIPGITLINVKALNLLKLAPGGHMGRLAIWSDS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LD LYG+ KT + K G+ LP KM N
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTN 286
>gi|125546040|gb|EAY92179.1| hypothetical protein OsI_13894 [Oryza sativa Indica Group]
Length = 817
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AFKKLD +YG + T A KKG+ LP+PKMAN
Sbjct: 259 CAFKKLDEVYGGFDTPALKKKGFVLPRPKMAN 290
>gi|326488173|dbj|BAJ89925.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKLD +YGS++ + KKG+ LP+PKM N
Sbjct: 259 SAFKKLDEVYGSFEASSSKKKGFVLPRPKMTNA 291
>gi|158291187|ref|XP_312665.4| AGAP002306-PA [Anopheles gambiae str. PEST]
gi|157018256|gb|EAA07484.5| AGAP002306-PA [Anopheles gambiae str. PEST]
Length = 435
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL++Y +D GL +AFRNIPGV+ + VSK+NLLKLAPGGHVGR +WTESAF KLD LYG
Sbjct: 209 GPLIIYDRDEGLRRAFRNIPGVDTMRVSKMNLLKLAPGGHVGRLCVWTESAFAKLDGLYG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ ++ KKGY+LP P MANT
Sbjct: 269 TWEKRSVAKKGYNLPTPIMANT 290
>gi|89257931|gb|ABD65244.1| ribosomal protein L4 [Stenella coeruleoalba]
Length = 316
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 170 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 229
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 230 TWRKSASLKSNYNLPMHKMLNT 251
>gi|170035401|ref|XP_001845558.1| 60S ribosomal protein L4 [Culex quinquefasciatus]
gi|167877374|gb|EDS40757.1| 60S ribosomal protein L4 [Culex quinquefasciatus]
Length = 436
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y KD GL KAFRNIPGV+ + V++LNLLKLAPGGHVGR +WTESAF +L+ +YG
Sbjct: 209 GPLVIYAKDEGLRKAFRNIPGVDTMKVTRLNLLKLAPGGHVGRLCVWTESAFAQLNEIYG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK K+ +KK Y+LP P MANT
Sbjct: 269 TWKNKSTVKKDYNLPNPIMANT 290
>gi|56755229|gb|AAW25794.1| SJCHGC06667 protein [Schistosoma japonicum]
gi|226467135|emb|CAX76048.1| putative ribosomal protein L4 [Schistosoma japonicum]
gi|226471656|emb|CAX70909.1| putative ribosomal protein L4 [Schistosoma japonicum]
Length = 375
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+++Y KD G+++AFRNIPGV LI+V LNLLKLAPGGH+GR IW+++
Sbjct: 196 MRNRRRIQKRGPIIIYKKDDGISRAFRNIPGVTLINVRALNLLKLAPGGHMGRLAIWSDA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+ KT + K G+ LP KM N+
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTNS 287
>gi|226467127|emb|CAX76044.1| putative ribosomal protein L4 [Schistosoma japonicum]
Length = 375
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+++Y KD G+++AFRNIPGV LI+V LNLLKLAPGGH+GR IW+++
Sbjct: 196 MRNRRRIQKRGPIIIYKKDDGISRAFRNIPGVTLINVRALNLLKLAPGGHMGRLAIWSDA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+ KT + K G+ LP KM N+
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTNS 287
>gi|112980817|gb|ABI29190.1| ribosomal protein L4 [Sus scrofa]
Length = 211
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 59 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 118
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 119 TWRKAATLKSNYNLPMHKMLNT 140
>gi|226467131|emb|CAX76046.1| putative ribosomal protein L4 [Schistosoma japonicum]
gi|226467137|emb|CAX76049.1| putative ribosomal protein L4 [Schistosoma japonicum]
Length = 375
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+++Y KD G+++AFRNIPGV LI+V LNLLKLAPGGH+GR IW+++
Sbjct: 196 MRNRRRIQKRGPIIIYKKDDGISRAFRNIPGVTLINVRALNLLKLAPGGHMGRLAIWSDA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+ KT + K G+ LP KM N+
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTNS 287
>gi|226467129|emb|CAX76045.1| putative ribosomal protein L4 [Schistosoma japonicum]
Length = 375
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+++Y KD G+++AFRNIPGV LI+V LNLLKLAPGGH+GR IW+++
Sbjct: 196 MRNRRRIQKRGPIIIYKKDDGISRAFRNIPGVTLINVRALNLLKLAPGGHMGRLAIWSDA 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+ KT + K G+ LP KM N+
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTNS 287
>gi|119598179|gb|EAW77773.1| ribosomal protein L4, isoform CRA_a [Homo sapiens]
gi|119598181|gb|EAW77775.1| ribosomal protein L4, isoform CRA_a [Homo sapiens]
Length = 333
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 112 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 171
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 172 TWRKAASLKSNYNLPMHKMINT 193
>gi|84468414|dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pratense]
Length = 406
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG D KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 201 MRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVVWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+ KM N+
Sbjct: 261 SAFEKLDSIYGSFDKGSEKKKGYVLPRAKMVNS 293
>gi|311334504|emb|CBN08633.1| ribosomal protein L4 [Microcosmus squamiger]
Length = 359
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 69/82 (84%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y KD G++KAFRNIPG+ LISV +L+LLK+APGGHVGRF+IWTESAFK LD+ YG
Sbjct: 206 GPCVIYDKDEGISKAFRNIPGITLISVDRLDLLKIAPGGHVGRFLIWTESAFKSLDSYYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ + +KK Y+LP PKM+ T
Sbjct: 266 TWRKMSEMKKNYNLPMPKMSCT 287
>gi|84468264|dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pratense]
gi|84468330|dbj|BAE71248.1| putative 60S ribosomal protein L1 [Trifolium pratense]
Length = 406
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG D KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 201 MRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVVWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+ KM N+
Sbjct: 261 SAFEKLDSIYGSFDKGSEKKKGYVLPRAKMVNS 293
>gi|197097764|ref|NP_001125225.1| 60S ribosomal protein L4 [Pongo abelii]
gi|75055142|sp|Q5RCR3.1|RL4_PONAB RecName: Full=60S ribosomal protein L4
gi|55727377|emb|CAH90444.1| hypothetical protein [Pongo abelii]
Length = 427
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|344252010|gb|EGW08114.1| 60S ribosomal protein L4 [Cricetulus griseus]
Length = 204
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 71/92 (77%), Gaps = 5/92 (5%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR RIQ RGP V+Y +D G+ KAFRNIPG+ L++VSKLN++KLAPGGHVGRF IWTES
Sbjct: 59 MRNRSRIQHRGPCVIYNEDNGIIKAFRNIPGITLLNVSKLNIVKLAPGGHVGRFCIWTES 118
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KL LYG+W+ K Y+L KM NT
Sbjct: 119 AFRKLHELYGTWQ-----KSNYNLLMHKMMNT 145
>gi|19113302|ref|NP_596510.1| 60S ribosomal protein L4 [Schizosaccharomyces pombe 972h-]
gi|19858781|sp|P35679.2|RL4A_SCHPO RecName: Full=60S ribosomal protein L4-A; AltName: Full=L2
gi|3810827|emb|CAA21788.1| 60S ribosomal protein L2 (predicted) [Schizosaccharomyces pombe]
Length = 363
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +QRRGPLVV+ +D G+ KAFRNIPGVE+++V +LNLL+LAPGGH+GRFVIWT+S
Sbjct: 196 LRNRRHVQRRGPLVVFNEDAGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD+++GS A LKK Y LP+ ++N
Sbjct: 256 AFGLLDSVFGSTTEAAQLKKNYFLPENIISNA 287
>gi|168005784|ref|XP_001755590.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693297|gb|EDQ79650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 403
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPLVVYG + L K+FRNIPGVE++SV++LNLL+LAPGGH+GRF++WT+
Sbjct: 198 MRNRRYVSRRGPLVVYGTEGAKLVKSFRNIPGVEVVSVNRLNLLQLAPGGHLGRFIVWTK 257
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD++YG+ + K+ LKK YSLP+ M N
Sbjct: 258 SAFEKLDSIYGTQEKKSLLKKNYSLPRNIMGN 289
>gi|388454673|ref|NP_001253129.1| 60S ribosomal protein L4 [Macaca mulatta]
gi|387539504|gb|AFJ70379.1| 60S ribosomal protein L4 [Macaca mulatta]
Length = 427
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|194387076|dbj|BAG59904.1| unnamed protein product [Homo sapiens]
Length = 239
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 95 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 154
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 155 TWRKAASLKSNYNLPMHKMINT 176
>gi|357484323|ref|XP_003612449.1| 60S ribosomal protein L4-1 [Medicago truncatula]
gi|217071858|gb|ACJ84289.1| unknown [Medicago truncatula]
gi|355513784|gb|AES95407.1| 60S ribosomal protein L4-1 [Medicago truncatula]
gi|388503734|gb|AFK39933.1| unknown [Medicago truncatula]
Length = 408
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG D KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 203 MRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTK 262
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YG++ + KKGY LP+ KM N+
Sbjct: 263 SAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNS 295
>gi|348688976|gb|EGZ28790.1| hypothetical protein PHYSODRAFT_353589 [Phytophthora sojae]
Length = 387
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPL+VY G KAFRNIPGVEL +V +LNLL+LAPGGH+GRF+IWT+SA
Sbjct: 202 RNRRYTTRRGPLIVYANANGAEKAFRNIPGVELANVERLNLLQLAPGGHLGRFIIWTKSA 261
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLD+LYG++ K+ K GY LP+ +M N
Sbjct: 262 FQKLDSLYGTYSKKSASKSGYQLPRHQMNNA 292
>gi|357439781|ref|XP_003590168.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355479216|gb|AES60419.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 406
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 201 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVVWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YG++ + KKGY LP+ KM N+
Sbjct: 261 SAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNS 293
>gi|402874635|ref|XP_003901138.1| PREDICTED: 60S ribosomal protein L4 [Papio anubis]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|449440055|ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
gi|449519122|ref|XP_004166584.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
Length = 405
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPG+++++V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 200 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKLAPGGHLGRFVIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
+AF+KLD++YGS++ + KKGY LP+ KM N
Sbjct: 260 TAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNA 292
>gi|11968086|ref|NP_071955.1| 60S ribosomal protein L4 [Rattus norvegicus]
gi|1710511|sp|P50878.3|RL4_RAT RecName: Full=60S ribosomal protein L4; AltName: Full=60S ribosomal
protein L1
gi|1165139|emb|CAA57671.1| ribosomal protein L4 [Rattus norvegicus]
Length = 421
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>gi|16579885|ref|NP_000959.2| 60S ribosomal protein L4 [Homo sapiens]
gi|397515616|ref|XP_003828045.1| PREDICTED: 60S ribosomal protein L4 [Pan paniscus]
gi|22002063|sp|P36578.5|RL4_HUMAN RecName: Full=60S ribosomal protein L4; AltName: Full=60S ribosomal
protein L1
gi|432359|dbj|BAA04887.1| ribosomal protein [Homo sapiens]
gi|12655035|gb|AAH01365.1| Ribosomal protein L4 [Homo sapiens]
gi|13543304|gb|AAH05817.1| Ribosomal protein L4 [Homo sapiens]
gi|14043526|gb|AAH07748.1| Ribosomal protein L4 [Homo sapiens]
gi|14124944|gb|AAH07996.1| Ribosomal protein L4 [Homo sapiens]
gi|14602748|gb|AAH09888.1| Ribosomal protein L4 [Homo sapiens]
gi|14603400|gb|AAH10151.1| Ribosomal protein L4 [Homo sapiens]
gi|15779181|gb|AAH14653.1| Ribosomal protein L4 [Homo sapiens]
gi|17932934|dbj|BAB79458.1| ribosomal protein L4 [Homo sapiens]
gi|44890465|gb|AAH66925.1| Ribosomal protein L4 [Homo sapiens]
gi|60656419|gb|AAX32773.1| ribosomal protein L4 [synthetic construct]
gi|66267594|gb|AAH95427.1| Ribosomal protein L4 [Homo sapiens]
gi|119598182|gb|EAW77776.1| ribosomal protein L4, isoform CRA_c [Homo sapiens]
gi|123982748|gb|ABM83115.1| ribosomal protein L4 [synthetic construct]
gi|123997415|gb|ABM86309.1| ribosomal protein L4 [synthetic construct]
gi|158255670|dbj|BAF83806.1| unnamed protein product [Homo sapiens]
gi|158257150|dbj|BAF84548.1| unnamed protein product [Homo sapiens]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|417410619|gb|JAA51779.1| Putative ribosomal protein, partial [Desmodus rotundus]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 211 GPCIIYNEDNGINKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 270
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 271 TWRKAASLKSNYNLPMHKMLNT 292
>gi|208965460|dbj|BAG72744.1| ribosomal protein L4 [synthetic construct]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|75076107|sp|Q4R5P9.1|RL4_MACFA RecName: Full=60S ribosomal protein L4
gi|67970467|dbj|BAE01576.1| unnamed protein product [Macaca fascicularis]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|332235956|ref|XP_003267171.1| PREDICTED: 60S ribosomal protein L4 isoform 1 [Nomascus leucogenys]
gi|90075136|dbj|BAE87248.1| unnamed protein product [Macaca fascicularis]
Length = 427
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|196007616|ref|XP_002113674.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190584078|gb|EDV24148.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 349
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 72/92 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +QRRGPL++Y D G+ KAFRN+PGVEL +S+LNLL LAPGGH+GRF +W ES
Sbjct: 173 LRNRRYVQRRGPLIIYNADNGIVKAFRNVPGVELAQISRLNLLSLAPGGHMGRFCVWGES 232
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD+++G+W+ + K Y+LP+ M +
Sbjct: 233 AFKKLDSVFGTWRKLSEEKSNYNLPRSIMTTS 264
>gi|39645153|gb|AAH63811.1| Ribosomal protein L4 [Rattus norvegicus]
gi|51980641|gb|AAH81801.1| Ribosomal protein L4 [Rattus norvegicus]
gi|149041947|gb|EDL95788.1| rCG58071, isoform CRA_a [Rattus norvegicus]
Length = 421
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>gi|432092214|gb|ELK24838.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 322
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 106 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 165
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 166 TWRRAASLKSNYNLPMHKMLNT 187
>gi|294878597|ref|XP_002768416.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
gi|239870844|gb|EER01134.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus ATCC
50983]
Length = 393
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 71/92 (77%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLVVY + GLTKAFRNIPG+EL V +LNLL++APGG GRF+IWT+
Sbjct: 195 MRNRRYVMRRGPLVVYAEGDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQP 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +L L+GS+++ A LK GY LP+P M N
Sbjct: 255 AFDRLQQLFGSYRSGAALKSGYRLPRPLMTNA 286
>gi|221119707|ref|XP_002157151.1| PREDICTED: 60S ribosomal protein L4-1-like [Hydra magnipapillata]
Length = 375
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 73/89 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR RRGPLVV+ +D G+ +AFRN+PGV+LI V +LNLLKL PGGH+GRFVIW+ES
Sbjct: 195 MRNRRYTMRRGPLVVFKEDHGIKQAFRNLPGVDLIQVDRLNLLKLCPGGHLGRFVIWSES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
AF++LD+++G+W+ + K YSLP+ KM
Sbjct: 255 AFERLDSIFGTWRKPSSEKVNYSLPRAKM 283
>gi|212274759|ref|NP_001130220.1| uncharacterized protein LOC100191314 [Zea mays]
gi|194688582|gb|ACF78375.1| unknown [Zea mays]
gi|219885387|gb|ACL53068.1| unknown [Zea mays]
gi|414873365|tpg|DAA51922.1| TPA: hypothetical protein ZEAMMB73_952734 [Zea mays]
Length = 404
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLIVYGAEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG++ T + KKG+ LP+PKMAN
Sbjct: 259 CAFKKLDEVYGTFDTPSAKKKGFLLPRPKMANA 291
>gi|148233066|ref|NP_001080545.1| 60S ribosomal protein L4-A [Xenopus laevis]
gi|292495031|sp|P08429.2|RL4A_XENLA RecName: Full=60S ribosomal protein L4-A; AltName: Full=L1A
gi|27882641|gb|AAH43895.1| Rpl-4 protein [Xenopus laevis]
gi|77748123|gb|AAI06316.1| Rpl-4 protein [Xenopus laevis]
gi|224828|prf||1202260A ribosomal protein L1a
Length = 396
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|30794450|ref|NP_077174.1| 60S ribosomal protein L4 [Mus musculus]
gi|22001911|sp|Q9D8E6.3|RL4_MOUSE RecName: Full=60S ribosomal protein L4
gi|12842070|dbj|BAB25458.1| unnamed protein product [Mus musculus]
gi|13097450|gb|AAH03459.1| Ribosomal protein L4 [Mus musculus]
gi|26353248|dbj|BAC40254.1| unnamed protein product [Mus musculus]
gi|62825991|gb|AAH94036.1| Ribosomal protein L4 [Mus musculus]
gi|74139207|dbj|BAE38489.1| unnamed protein product [Mus musculus]
gi|74177798|dbj|BAE38990.1| unnamed protein product [Mus musculus]
gi|74185075|dbj|BAE39140.1| unnamed protein product [Mus musculus]
gi|74188888|dbj|BAE39218.1| unnamed protein product [Mus musculus]
gi|74194326|dbj|BAE24683.1| unnamed protein product [Mus musculus]
gi|124376026|gb|AAI32324.1| Ribosomal protein L4 [Mus musculus]
gi|124376376|gb|AAI32322.1| Ribosomal protein L4 [Mus musculus]
gi|148694109|gb|EDL26056.1| ribosomal protein L4 [Mus musculus]
Length = 419
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>gi|149041948|gb|EDL95789.1| rCG58071, isoform CRA_b [Rattus norvegicus]
Length = 233
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 18 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 77
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 78 TWRKAASLKSNYNLPMHKMMNT 99
>gi|351695545|gb|EHA98463.1| 60S ribosomal protein L4 [Heterocephalus glaber]
Length = 420
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L+ VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLDVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|242032693|ref|XP_002463741.1| hypothetical protein SORBIDRAFT_01g005210 [Sorghum bicolor]
gi|241917595|gb|EER90739.1| hypothetical protein SORBIDRAFT_01g005210 [Sorghum bicolor]
Length = 404
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKLD +YG++ T + KKG+ LP+ KMAN
Sbjct: 259 SAFKKLDEVYGTFDTPSAKKKGFVLPRAKMANA 291
>gi|440908053|gb|ELR58120.1| 60S ribosomal protein L4, partial [Bos grunniens mutus]
Length = 422
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|62460480|ref|NP_001014894.1| 60S ribosomal protein L4 [Bos taurus]
gi|426232584|ref|XP_004010301.1| PREDICTED: 60S ribosomal protein L4 [Ovis aries]
gi|73917531|sp|Q58DW0.3|RL4_BOVIN RecName: Full=60S ribosomal protein L4
gi|61553010|gb|AAX46334.1| ribosomal protein L4 [Bos taurus]
gi|74267758|gb|AAI02522.1| Ribosomal protein L4 [Bos taurus]
gi|296483623|tpg|DAA25738.1| TPA: 60S ribosomal protein L4 [Bos taurus]
Length = 422
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|119598180|gb|EAW77774.1| ribosomal protein L4, isoform CRA_b [Homo sapiens]
Length = 477
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 256 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 315
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 316 TWRKAASLKSNYNLPMHKMINT 337
>gi|78557859|gb|ABB46357.1| ribosomal protein L4 [Ovis aries]
Length = 193
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 69 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 128
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 129 TWRKAASLKSNYNLPMHKMLNT 150
>gi|19112671|ref|NP_595879.1| 60S ribosomal protein L4 [Schizosaccharomyces pombe 972h-]
gi|15214260|sp|Q9P784.1|RL4B_SCHPO RecName: Full=60S ribosomal protein L4-B
gi|7630164|emb|CAB88236.1| 60S ribosomal protein L2 (predicted) [Schizosaccharomyces pombe]
Length = 363
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +QRRGPLVV+ +D G+ KAFRNIPGVE+++V +LNLL+LAPGGH+GRFVIWT+S
Sbjct: 196 LRNRRHVQRRGPLVVFNEDTGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD+++GS A LKK Y LP+ ++N
Sbjct: 256 AFGLLDSVFGSTTEVAQLKKNYFLPENIISNA 287
>gi|356548210|ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
Length = 405
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I RRGPLVVYG + KAFRN+PGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 200 MRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAPGGHLGRFVIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + KKGY LP+ KM N+
Sbjct: 260 SAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNS 292
>gi|255089284|ref|XP_002506564.1| predicted protein [Micromonas sp. RCC299]
gi|226521836|gb|ACO67822.1| predicted protein [Micromonas sp. RCC299]
Length = 395
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QR+GPLVVY D G+TKA RNIPGVEL SV +L LL LAPGGHVGRF+IWT+S
Sbjct: 191 MRNRRYVQRKGPLVVYANDSGITKAMRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKS 250
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
AF+KLD++YG+ K+ KKG+ P MA
Sbjct: 251 AFEKLDSIYGTSAVKSSAKKGWKPPANIMA 280
>gi|12846949|dbj|BAB27375.1| unnamed protein product [Mus musculus]
Length = 419
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>gi|297722605|ref|NP_001173666.1| Os03g0796501 [Oryza sativa Japonica Group]
gi|31126753|gb|AAP44673.1| putative 60S ribosomal protein L1 [Oryza sativa Japonica Group]
gi|50400025|gb|AAT76413.1| putative 60S ribosomal protein L1 [Oryza sativa Japonica Group]
gi|222625961|gb|EEE60093.1| hypothetical protein OsJ_12950 [Oryza sativa Japonica Group]
gi|255674964|dbj|BAH92394.1| Os03g0796501 [Oryza sativa Japonica Group]
Length = 404
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG + T A KKG+ LP+PKMAN
Sbjct: 259 CAFKKLDEVYGGFDTPALKKKGFVLPRPKMANA 291
>gi|194387084|dbj|BAG59908.1| unnamed protein product [Homo sapiens]
Length = 414
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 214 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 273
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 274 TWRKAASLKSNYNLPMHKMINT 295
>gi|65082|emb|CAA28843.1| unnamed protein product [Xenopus laevis]
Length = 396
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|62087534|dbj|BAD92214.1| ribosomal protein L4 variant [Homo sapiens]
Length = 441
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 220 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 279
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 280 TWRKAASLKSNYNLPMHKMINT 301
>gi|183212279|gb|ACC54802.1| ribosomal protein L4 [Xenopus borealis]
Length = 318
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 178 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 237
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 238 TWRKSAKLKADYNLPMHKMTNT 259
>gi|426379500|ref|XP_004056433.1| PREDICTED: 60S ribosomal protein L4 [Gorilla gorilla gorilla]
Length = 522
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 302 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 361
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 362 TWRKAASLKSNYNLPMHKMINT 383
>gi|335280113|ref|XP_003121789.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L4 [Sus
scrofa]
Length = 427
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAATLKSNYNLPMHKMLNT 287
>gi|284009776|ref|NP_001165003.1| 60S ribosomal protein L4 [Xenopus (Silurana) tropicalis]
gi|89266823|emb|CAJ83407.1| ribosomal protein L4 [Xenopus (Silurana) tropicalis]
gi|189442539|gb|AAI67741.1| Unknown (protein for MGC:186651) [Xenopus (Silurana) tropicalis]
gi|197246565|gb|AAI68597.1| Unknown (protein for MGC:185639) [Xenopus (Silurana) tropicalis]
Length = 396
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP VVY ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVVYNENNGIVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|296213527|ref|XP_002753304.1| PREDICTED: 60S ribosomal protein L4-like [Callithrix jacchus]
Length = 428
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|344293519|ref|XP_003418470.1| PREDICTED: 60S ribosomal protein L4-like [Loxodonta africana]
Length = 427
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 209 GPCIIYNEDNGVIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 269 TWRKAASLKSNYNLPMHKMMNT 290
>gi|297829496|ref|XP_002882630.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
gi|297328470|gb|EFH58889.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
Length = 406
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLVVYGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 261 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 293
>gi|410960980|ref|XP_003987064.1| PREDICTED: 60S ribosomal protein L4 isoform 1 [Felis catus]
gi|410960982|ref|XP_003987065.1| PREDICTED: 60S ribosomal protein L4 isoform 2 [Felis catus]
Length = 421
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|403276098|ref|XP_003929752.1| PREDICTED: 60S ribosomal protein L4 [Saimiri boliviensis
boliviensis]
Length = 427
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|21593543|gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana]
Length = 406
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 261 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 293
>gi|157124831|ref|XP_001660544.1| 60S ribosomal protein L4 [Aedes aegypti]
gi|94469276|gb|ABF18487.1| ribosomal protein L4 [Aedes aegypti]
gi|108873832|gb|EAT38057.1| AAEL009994-PA [Aedes aegypti]
Length = 431
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 72/85 (84%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
QRRGPLV+Y KD GL KAFRNIPGV+ +SV+++NLLK+APGGHVGR +WTESAF +L+
Sbjct: 206 QRRGPLVIYAKDEGLRKAFRNIPGVDTMSVNRMNLLKMAPGGHVGRLCVWTESAFAQLND 265
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
+YG+WK K+ +KK Y+LP P MANT
Sbjct: 266 IYGTWKNKSTVKKDYNLPNPLMANT 290
>gi|126277469|ref|XP_001376078.1| PREDICTED: 60S ribosomal protein L4-like [Monodelphis domestica]
Length = 435
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRRPATLKSHYNLPMHKMTNT 287
>gi|428167935|gb|EKX36886.1| large subunit ribosomal protein L4e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 399
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 75/91 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QR+GPL+VY + G+ +AFRNIPG+++ V +LNLLKLAPGGH+GRFVIWT+S
Sbjct: 187 MRNRRYVQRKGPLLVYANNNGIEQAFRNIPGLDIACVDRLNLLKLAPGGHLGRFVIWTQS 246
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF+KLD+++GS+ + +KK ++LP+ M N
Sbjct: 247 AFEKLDSIFGSYDKPSEIKKTFTLPRSMMTN 277
>gi|356991214|ref|NP_001239338.1| 60S ribosomal protein L4 [Canis lupus familiaris]
Length = 422
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|392883308|gb|AFM90486.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KMANT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMANTDLSRIM 293
>gi|359323161|ref|XP_003640018.1| PREDICTED: 60S ribosomal protein L4-like [Canis lupus familiaris]
Length = 422
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|108861843|gb|ABG21823.1| ribosomal protein L4-like protein [Schistosoma mansoni]
Length = 375
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 74/91 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQ+RGP+V+Y KD G+++AFRNIPG+ LI+V LNLLKLAPGGH+GR IW++S
Sbjct: 196 MRNRRRIQKRGPIVIYKKDDGISRAFRNIPGITLINVKALNLLKLAPGGHMGRLAIWSDS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LD LYG+ KT + K G+ LP KM +
Sbjct: 256 AFRQLDKLYGTRKTGSVKKSGFHLPIAKMTH 286
>gi|79313167|ref|NP_001030663.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
gi|332641269|gb|AEE74790.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
Length = 405
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 261 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 293
>gi|15232723|ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
gi|17369604|sp|Q9SF40.1|RL4A_ARATH RecName: Full=60S ribosomal protein L4-1; Short=L1
gi|6682241|gb|AAF23293.1|AC016661_18 putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22 [Arabidopsis thaliana]
gi|27311665|gb|AAO00798.1| putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|30725664|gb|AAP37854.1| At3g09630 [Arabidopsis thaliana]
gi|332641268|gb|AEE74789.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
Length = 406
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 261 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 293
>gi|194689338|gb|ACF78753.1| unknown [Zea mays]
gi|224031407|gb|ACN34779.1| unknown [Zea mays]
gi|413932810|gb|AFW67361.1| 60S ribosomal protein L4 [Zea mays]
Length = 404
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG++ + KKG+ LP+PKMAN
Sbjct: 259 CAFKKLDEVYGTFNAPSAKKKGFVLPRPKMANA 291
>gi|212275964|ref|NP_001130508.1| uncharacterized protein LOC100191607 [Zea mays]
gi|195619738|gb|ACG31699.1| 60S ribosomal protein L4 [Zea mays]
Length = 404
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG++ + KKG+ LP+PKMAN
Sbjct: 259 CAFKKLDEVYGTFNAPSAKKKGFVLPRPKMANA 291
>gi|379994389|gb|AFD22821.1| ribosomal protein L4, partial [Collodictyon triciliatum]
Length = 200
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR + R GPLVVY +D G+T+AFRN+PGVEL VS+LNLL+LAPGGH+GRF+IWT+S
Sbjct: 29 LRNRRHVSRLGPLVVYAEDNGVTRAFRNLPGVELAHVSRLNLLRLAPGGHLGRFIIWTKS 88
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF KLD ++G+++ A K GY LP+ ++N QR++
Sbjct: 89 AFLKLDEIFGTYQKAAVQKVGYHLPRSVLSNADIQRII 126
>gi|226497070|ref|NP_001147047.1| 60S ribosomal protein L4 [Zea mays]
gi|195606864|gb|ACG25262.1| 60S ribosomal protein L4 [Zea mays]
Length = 404
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YGS+ + KKG+ LP+PKMAN
Sbjct: 259 SAFKKLEEVYGSFDAPSQKKKGFVLPRPKMANA 291
>gi|194704098|gb|ACF86133.1| unknown [Zea mays]
gi|414591976|tpg|DAA42547.1| TPA: 60S ribosomal protein L4 [Zea mays]
Length = 404
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYINRKGPLVVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YGS+ + KKG+ LP+PKMAN
Sbjct: 259 SAFKKLEEVYGSFDAPSQKKKGFVLPRPKMANA 291
>gi|225439761|ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
Length = 406
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS++ + K GY LP+ KM N
Sbjct: 261 SAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNA 293
>gi|149692303|ref|XP_001497144.1| PREDICTED: 60S ribosomal protein L4-like [Equus caballus]
Length = 422
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|335772681|gb|AEH58142.1| 60S ribosomal protein L4-like protein, partial [Equus caballus]
Length = 375
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 159 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 218
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 219 TWRKAASLKSNYNLPMHKMLNT 240
>gi|390467904|ref|XP_002752764.2| PREDICTED: 60S ribosomal protein L4-like [Callithrix jacchus]
Length = 421
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VS+LN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSQLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>gi|431895890|gb|ELK05308.1| 60S ribosomal protein L4 [Pteropus alecto]
Length = 423
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|395502710|ref|XP_003755720.1| PREDICTED: 60S ribosomal protein L4 [Sarcophilus harrisii]
Length = 428
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRRPATLKSHYNLPMHKMTNT 287
>gi|147898584|ref|NP_001082721.1| 60S ribosomal protein L4-B [Xenopus laevis]
gi|292495032|sp|P02385.2|RL4B_XENLA RecName: Full=60S ribosomal protein L4-B; AltName: Full=L1B
gi|32822849|gb|AAH54956.1| Rpl4-b protein [Xenopus laevis]
Length = 401
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|325183777|emb|CCA18236.1| hypothetical protein LOC100194262 [Albugo laibachii Nc14]
Length = 388
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + RRGPL+VY GL KAFRNIPGVEL V +LNLL+LAPGGH+GRFVIWT++A
Sbjct: 202 RNRRYVMRRGPLIVYASPNGLEKAFRNIPGVELAHVERLNLLQLAPGGHLGRFVIWTKTA 261
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLDALYG++ K+ K Y+LP+ M N
Sbjct: 262 FEKLDALYGTYSKKSSAKVDYTLPRHLMNNA 292
>gi|899428|emb|CAA28844.1| ribosomal protein L1b (396 AA) [Xenopus laevis]
gi|224829|prf||1202260B ribosomal protein L1b
Length = 396
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 205 GPCVIYNENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 264
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 265 TWRKSAKLKADYNLPMHKMTNT 286
>gi|17367847|sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; AltName: Full=L1
gi|4887131|gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca]
Length = 408
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPG+++I+V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 203 MRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKLAPGGHLGRFVVWTK 262
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD++YGS+ + K GY LP+ KM N
Sbjct: 263 SAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVN 294
>gi|307775447|ref|NP_001182746.1| ribosomal protein L4-like [Oryctolagus cuniculus]
Length = 425
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y +D G+ KAFRNIPG+ L++V+KLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIYNEDNGIVKAFRNIPGITLLNVTKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|297741490|emb|CBI32622.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 139 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTK 198
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS++ + K GY LP+ KM N
Sbjct: 199 SAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNA 231
>gi|302766759|ref|XP_002966800.1| hypothetical protein SELMODRAFT_144235 [Selaginella moellendorffii]
gi|300166220|gb|EFJ32827.1| hypothetical protein SELMODRAFT_144235 [Selaginella moellendorffii]
Length = 401
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPL++YG + L KAF NIPG+E+ +V++LNLL+LAPGGH+GRF+IWT+
Sbjct: 200 MRNRRYVSRRGPLIIYGTEGAKLVKAFTNIPGIEVCNVNRLNLLQLAPGGHLGRFIIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD ++GS+ T A LKK Y LP+P M+N+
Sbjct: 260 CAFEKLDEIFGSFDTPAALKKNYLLPRPIMSNS 292
>gi|298712581|emb|CBJ33281.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 379
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 71/92 (77%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGPLV+Y K G+++AFRN+PGVE V +LNLL LAPGGH+GRF +WT++
Sbjct: 194 MRNRRYVMRRGPLVIYDKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHIGRFCVWTQA 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLD++YG++ K+ +K + LP+ M NT
Sbjct: 254 AFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNT 285
>gi|302761726|ref|XP_002964285.1| hypothetical protein SELMODRAFT_166994 [Selaginella moellendorffii]
gi|300168014|gb|EFJ34618.1| hypothetical protein SELMODRAFT_166994 [Selaginella moellendorffii]
Length = 401
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPL++YG + L KAF NIPG+E+ +V++LNLL+LAPGGH+GRF+IWT+
Sbjct: 200 MRNRRYVSRRGPLIIYGTEGAKLVKAFTNIPGIEVCNVNRLNLLQLAPGGHLGRFIIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD ++GS+ T A LKK Y LP+P M+N+
Sbjct: 260 CAFEKLDEIFGSFDTPAALKKNYLLPRPIMSNS 292
>gi|27694877|gb|AAH41744.1| Rpl4-b-prov protein, partial [Xenopus laevis]
Length = 375
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|26376612|dbj|BAB28234.2| unnamed protein product [Mus musculus]
Length = 325
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ K FRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 112 GPCIIYNEDNGIIKGFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 171
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 172 TWRKAASLKSNYNLPMHKMMNT 193
>gi|311334996|emb|CBH31367.1| ribosomal protein L4 [Oreochromis mossambicus]
Length = 165
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 68/83 (81%)
Query: 10 RGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
R P ++Y +D G+TKAFRNIPG+ L +V+KLNLL+LAPGGHVGRF IWTESAF+KLD LY
Sbjct: 1 RVPCIIYNQDGGVTKAFRNIPGITLQNVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLY 60
Query: 70 GSWKTKAPLKKGYSLPQPKMANT 92
G+W+ A LK GY+LP KM NT
Sbjct: 61 GTWRKPASLKAGYTLPMHKMTNT 83
>gi|297806223|ref|XP_002870995.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
gi|297316832|gb|EFH47254.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
Length = 407
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLVVYGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF KL+++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAFDKLESIYGSFEKPSEKKKGYVLPRSKMLNA 294
>gi|392873966|gb|AFM85815.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKPGYNLPIHKMTNTDLSRIM 293
>gi|388496992|gb|AFK36562.1| unknown [Medicago truncatula]
Length = 307
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 102 MRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTK 161
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
+AF+KLD++YGS+ + KKGY LP+ KM N+
Sbjct: 162 TAFEKLDSIYGSFDKPSEKKKGYVLPRAKMVNS 194
>gi|13605831|gb|AAK32901.1|AF367314_1 AT5g02870/F9G14_180 [Arabidopsis thaliana]
gi|22137186|gb|AAM91438.1| AT5g02870/F9G14_180 [Arabidopsis thaliana]
gi|110740340|dbj|BAF02065.1| 60S ribosomal protein - like [Arabidopsis thaliana]
Length = 307
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVV+G + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 102 MRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 161
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 162 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 194
>gi|26450328|dbj|BAC42280.1| putative 60S ribosomal protein [Arabidopsis thaliana]
Length = 407
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVV+G + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 294
>gi|15242558|ref|NP_195907.1| 60S ribosomal protein L4-2 [Arabidopsis thaliana]
gi|20143905|sp|P49691.2|RL4B_ARATH RecName: Full=60S ribosomal protein L4-2; AltName: Full=L1
gi|7413562|emb|CAB86041.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|15450798|gb|AAK96670.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|16649033|gb|AAL24368.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|17064752|gb|AAL32530.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|20260072|gb|AAM13383.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|21387109|gb|AAM47958.1| 60S ribosomal protein-like protein [Arabidopsis thaliana]
gi|22530964|gb|AAM96986.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|25083642|gb|AAN72099.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|332003146|gb|AED90529.1| 60S ribosomal protein L4-2 [Arabidopsis thaliana]
Length = 407
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVV+G + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 294
>gi|186519603|ref|NP_001119159.1| 60S ribosomal protein L4-2 [Arabidopsis thaliana]
gi|332003147|gb|AED90530.1| 60S ribosomal protein L4-2 [Arabidopsis thaliana]
Length = 406
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVV+G + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 294
>gi|387915764|gb|AFK11491.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 399
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|224138574|ref|XP_002322848.1| predicted protein [Populus trichocarpa]
gi|222867478|gb|EEF04609.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLIVYGTEGAKMVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +KLD++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAIEKLDSIYGSFEKCSEKKKGYVLPRSKMVNA 294
>gi|297606826|ref|NP_001059041.2| Os07g0180900 [Oryza sativa Japonica Group]
gi|255677563|dbj|BAF20955.2| Os07g0180900, partial [Oryza sativa Japonica Group]
Length = 425
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 220 MRNRRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 279
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YG+++ + KKG+ LP+PKMAN
Sbjct: 280 SAFKKLEEVYGTFEAPSLKKKGFILPRPKMANA 312
>gi|315113297|pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|34393487|dbj|BAC83047.1| putative 60S ribosomal protein L4/L1 [Oryza sativa Japonica Group]
gi|125599330|gb|EAZ38906.1| hypothetical protein OsJ_23326 [Oryza sativa Japonica Group]
gi|215686382|dbj|BAG87643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737561|dbj|BAG96691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737607|dbj|BAG96737.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737716|dbj|BAG96846.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765851|dbj|BAG87548.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 405
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 200 MRNRRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YG+++ + KKG+ LP+PKMAN
Sbjct: 260 SAFKKLEEVYGTFEAPSLKKKGFILPRPKMANA 292
>gi|392880812|gb|AFM89238.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|118489137|gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 407
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLIVYGTEGAKMVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +KLD++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAIEKLDSIYGSFEKCSEKKKGYVLPRSKMVNA 294
>gi|392882072|gb|AFM89868.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|392874138|gb|AFM85901.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392877586|gb|AFM87625.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392879782|gb|AFM88723.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392879984|gb|AFM88824.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392880394|gb|AFM89029.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392880668|gb|AFM89166.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392880786|gb|AFM89225.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392881144|gb|AFM89404.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
gi|392884404|gb|AFM91034.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|392879904|gb|AFM88784.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|77999245|gb|ABB16969.1| unknown [Solanum tuberosum]
Length = 405
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 199 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEICHVDRLNLLKLAPGGHLGRFIIWTK 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A++KLD +YG++ + KKGY LP+PKM N
Sbjct: 259 CAYEKLDGIYGTFDKPSLKKKGYLLPRPKMVNA 291
>gi|392878028|gb|AFM87846.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|392873276|gb|AFM85470.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|392883686|gb|AFM90675.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|357111367|ref|XP_003557485.1| PREDICTED: 60S ribosomal protein L4-1-like [Brachypodium
distachyon]
Length = 404
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR ++R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 199 MRNRRYVKRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YG++ + KKG+ LP+PKMAN
Sbjct: 259 SAFKKLEEVYGTFDAPSLKKKGFVLPRPKMANA 291
>gi|125557447|gb|EAZ02983.1| hypothetical protein OsI_25124 [Oryza sativa Indica Group]
Length = 405
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWTE
Sbjct: 200 MRNRRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTE 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFKKL+ +YG++ + KKG+ LP+PKMAN
Sbjct: 260 SAFKKLEEVYGTFDAPSLKKKGFILPRPKMANA 292
>gi|55926194|ref|NP_001007480.1| 60S ribosomal protein L4 [Gallus gallus]
gi|53135834|emb|CAG32462.1| hypothetical protein RCJMB04_25p23 [Gallus gallus]
Length = 421
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ +AFRNIPG+ L+ V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKPATLKSDYNLPMHKMTNT 287
>gi|168002016|ref|XP_001753710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695117|gb|EDQ81462.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPLVVYG + L KAFRNIPGVE++SV+ LNLL+LAPGGH+GRF++WT+
Sbjct: 199 MRNRRYVSRRGPLVVYGTEGAKLVKAFRNIPGVEVVSVNHLNLLQLAPGGHLGRFIVWTK 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD +YG+ + K+ LKK Y LP M+N
Sbjct: 259 SAFEKLDVVYGTQEKKSLLKKNYILPYNIMSN 290
>gi|449270657|gb|EMC81316.1| 60S ribosomal protein L4, partial [Columba livia]
Length = 376
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ +AFRNIPG+ L+ V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 205 GPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 264
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 265 TWRKPATLKSDYNLPMHKMTNT 286
>gi|168014976|ref|XP_001760027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688777|gb|EDQ75152.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPLVVYG + L KAFRNIPGVE++SV +LNLL+LAPGGH+GRF+IWT+
Sbjct: 199 MRNRRYVSRRGPLVVYGTEGAKLVKAFRNIPGVEIVSVDRLNLLQLAPGGHLGRFIIWTK 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD+++G+ + K+ +KK Y LP+ M N
Sbjct: 259 SAFEKLDSVFGTQEKKSLVKKNYILPRNIMGN 290
>gi|168002086|ref|XP_001753745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695152|gb|EDQ81497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 403
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + RRGPLVVYG + L KAFRNIPGVE++SV++LNLL+LAPGGH+GRF++WT+
Sbjct: 198 MRNRRYVSRRGPLVVYGTEGAKLVKAFRNIPGVEVVSVNRLNLLQLAPGGHLGRFIVWTK 257
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD ++G+ + K+ LKK Y LP+ M N
Sbjct: 258 SAFEKLDDIFGTQEKKSLLKKDYILPRNIMGN 289
>gi|444322183|ref|XP_004181747.1| hypothetical protein TBLA_0G02910 [Tetrapisispora blattae CBS 6284]
gi|387514792|emb|CCH62228.1| hypothetical protein TBLA_0G02910 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RNIPGVE V+ LNLL+LAPG H+GRFVIWTESA
Sbjct: 195 RNRRFTQRRGPLVVYAEDNGIVKALRNIPGVETSPVTALNLLQLAPGAHLGRFVIWTESA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQ 86
F KLD+++GS +T A K GYSLPQ
Sbjct: 255 FAKLDSIWGS-ETTASAKSGYSLPQ 278
>gi|312177|emb|CAA51666.1| ribosomal protein L2 [Schizosaccharomyces pombe]
Length = 357
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 70/86 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+ NRR +QRRGPLVV+ +D G+ KAFRNIPGVE+++V +LNLL+LAPGGH+GRFVIWT+S
Sbjct: 196 LANRRHVQRRGPLVVFNEDAGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
AF LD+++GS A LKK Y LP
Sbjct: 256 AFGLLDSVFGSTTEAAELKKNYGLPD 281
>gi|291397386|ref|XP_002715120.1| PREDICTED: ribosomal protein L4-like, partial [Oryctolagus
cuniculus]
Length = 290
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y +D G+ KAFRNIPG+ L++V+KLN+LKLAPGGHVGRF IWTESAF+KLD L+G
Sbjct: 206 GPCVIYNEDNGIVKAFRNIPGITLLNVTKLNILKLAPGGHVGRFCIWTESAFRKLDDLHG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSDYNLPMHKMPNT 287
>gi|255715761|ref|XP_002554162.1| 60S ribosomal protein L4 [Lachancea thermotolerans]
gi|238935544|emb|CAR23725.1| KLTH0E15686p [Lachancea thermotolerans CBS 6340]
Length = 363
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 71/91 (78%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KAFRN+PGVE +V+ L+LL+LAPG H+GRFVIWTESA
Sbjct: 195 RNRRFTQRRGPLVVYAEDNGIVKAFRNLPGVETANVASLSLLQLAPGAHMGRFVIWTESA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS + +K GY+LP ++NT
Sbjct: 255 FAKLDQVWGSETVASAVKSGYTLPSNIISNT 285
>gi|379072572|gb|AFC92918.1| ribosomal protein L4, partial [Rhinophrynus dorsalis]
Length = 282
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y +D G+ K+FRNIPG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 151 GPCVIYNEDNGIIKSFRNIPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDDLYG 210
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 211 TWRKAATLKADYNLPMHKMTNT 232
>gi|387018312|gb|AFJ51274.1| 60S ribosomal protein L4 [Crotalus adamanteus]
Length = 373
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRRIQR+GP ++Y +D G+ KAFRNIPG+ L++V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 196 MRNRRRIQRKGPCIIYNEDNGIIKAFRNIPGITLLNVNKLNLLRLAPGGHVGRFCIWTES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 256 AFRKLDDLYGTWRKPATLKSSYNLPMHKMTNT 287
>gi|224068640|ref|XP_002326163.1| predicted protein [Populus trichocarpa]
gi|118486971|gb|ABK95318.1| unknown [Populus trichocarpa]
gi|222833356|gb|EEE71833.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLL+LAPGGH+GRFVIWT+
Sbjct: 203 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLRLAPGGHLGRFVIWTK 262
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +KLD++YG++ + KKGY LP+ KM N
Sbjct: 263 SAIEKLDSIYGTFDKSSEKKKGYVLPRTKMVNA 295
>gi|62897675|dbj|BAD96777.1| ribosomal protein L4 variant [Homo sapiens]
Length = 427
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IW ESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP +M NT
Sbjct: 266 TWRKAASLKSNYNLPMHEMINT 287
>gi|268563999|ref|XP_002638989.1| C. briggsae CBR-RPL-4 protein [Caenorhabditis briggsae]
Length = 345
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNR+ Q+ GP+V+YG+D +AFRNIPGV++++V +LNLLKLAPGGH+GR VIWTES
Sbjct: 195 LRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVLNVERLNLLKLAPGGHLGRLVIWTES 254
Query: 61 AFKKLDALYGSW-KTKAPLKKGYSLPQPKMANT 92
AFKKLDA+YG+ + LKKG+S+P P MAN+
Sbjct: 255 AFKKLDAIYGTTVANSSQLKKGWSVPLPIMANS 287
>gi|224144519|ref|XP_002336155.1| predicted protein [Populus trichocarpa]
gi|222874555|gb|EEF11686.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLL+LAPGGH+GRFVIWT+
Sbjct: 203 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLRLAPGGHLGRFVIWTK 262
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +KLD++YG++ + KKGY LP+ KM N
Sbjct: 263 SAIEKLDSIYGTFDKSSEKKKGYVLPRTKMVNA 295
>gi|44968095|gb|AAS49583.1| ribosomal protein L4 [Gallus gallus]
Length = 280
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ +AFRNIPG+ L+ V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 188 GPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 247
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 248 TWRKPATLKSDYNLPMHKMTNT 269
>gi|302832173|ref|XP_002947651.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
gi|300266999|gb|EFJ51184.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
Length = 410
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 75/91 (82%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR + R+GPLVV+ D G++KAFRN+PGVE+ SV +LNLL+LAPGGH+GRF IW++S
Sbjct: 196 LRNRRYVMRKGPLVVFANDEGISKAFRNLPGVEVTSVDRLNLLQLAPGGHLGRFCIWSKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF+KLD ++G+ +++ +KKG+ +P+ M N
Sbjct: 256 AFEKLDKIFGTATSESEVKKGFKVPRSVMTN 286
>gi|406602813|emb|CCH45639.1| 60S ribosomal protein L4-A [Wickerhamomyces ciferrii]
Length = 364
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVYG+D GL KAFRNIPGVE +VS L LL+LAPG H+GRFVIWTES
Sbjct: 195 LRGRRYTQRRGPLVVYGQDNGLVKAFRNIPGVETANVSSLGLLQLAPGAHLGRFVIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF KLD+++GS ++ + K GYSLP ++N
Sbjct: 255 AFAKLDSVWGS-ESVSSAKSGYSLPSNIISN 284
>gi|356505182|ref|XP_003521371.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
Length = 402
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I +GPL+VYG + KAFRNIPGVE+ +V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 197 MRNRRYISGKGPLIVYGTEGAKAIKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFIIWTK 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD++YGS+ + K GY LP+PKM N+
Sbjct: 257 SAFEKLDSIYGSFDKASEKKNGYLLPRPKMINS 289
>gi|452824604|gb|EME31606.1| 60S ribosomal protein L4 [Galdieria sulphuraria]
Length = 378
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 71/92 (77%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPL++Y KD G+ KAFRN+PGVEL + LNLL+LAPGGH+GRF IWT+S
Sbjct: 199 LRNRRYTQRRGPLIIYEKDEGIVKAFRNLPGVELCRMDSLNLLQLAPGGHLGRFCIWTKS 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD ++G++ + KK Y+LP+ + N
Sbjct: 259 AFEKLDEIFGTFTQPSQQKKDYTLPKSILTNC 290
>gi|313756|emb|CAA29796.1| L1a protein [Xenopus laevis]
Length = 396
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LA GGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLALGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>gi|392879712|gb|AFM88688.1| 60S ribosomal protein L4-like isoform 2 [Callorhinchus milii]
Length = 397
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V++ +D G+TKAFRN PG+ L++V+KLN+L+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCVIFNEDNGITKAFRNTPGITLLNVNKLNVLRLAPGGHVGRFCIWTESAFRKLDPLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANTK-QRVM 97
+W+ + LK GY+LP KM NT R+M
Sbjct: 266 TWRKPSTLKLGYNLPIHKMTNTDLSRIM 293
>gi|225435782|ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
Length = 405
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 200 MRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTK 259
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +K+D++YGS+ + KKGY LP+ KM N
Sbjct: 260 SAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNA 292
>gi|71017629|ref|XP_759045.1| hypothetical protein UM02898.1 [Ustilago maydis 521]
gi|46098714|gb|EAK83947.1| hypothetical protein UM02898.1 [Ustilago maydis 521]
Length = 333
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y KD G+ KAFRN+PGVEL SV +LNLL+LAPGGH+GRFVI+T+S
Sbjct: 165 LRNRRHTQRRGPLVIYNKDAGIVKAFRNVPGVELCSVERLNLLQLAPGGHLGRFVIFTQS 224
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD ++ + K G++LP+ K+ANT
Sbjct: 225 AFGRLDEVFAA-------KTGFTLPKAKIANT 249
>gi|355692816|gb|EHH27419.1| 60S ribosomal protein L1, partial [Macaca mulatta]
Length = 426
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
QRRGP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGG VGRF IWTESAF+KLD
Sbjct: 202 QRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGRVGRFCIWTESAFRKLDE 261
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
LYG+W+ A LK Y+LP KM NT
Sbjct: 262 LYGTWRKAASLKSNYNLPMHKMINT 286
>gi|388853756|emb|CCF52477.1| probable RPL4A-ribosomal protein L4-A [Ustilago hordei]
Length = 362
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y KD G+ KAFRN+PGVEL SV +LNLL+LAPGGH+GRFVI+T+S
Sbjct: 194 LRNRRHTQRRGPLVIYNKDAGIVKAFRNVPGVELCSVERLNLLQLAPGGHLGRFVIFTQS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD ++ + K G++LP+ K+ANT
Sbjct: 254 AFGRLDEVFAA-------KSGFTLPKAKIANT 278
>gi|321437441|gb|ADW83731.1| ribosomal protein L4 [Musa acuminata AAA Group]
Length = 301
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRNIPGV++ +V +LNLLKLA GGH+GRF+IWT+
Sbjct: 96 MRNRRYISRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLASGGHIGRFIIWTK 155
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD+++G++ + KKGY LP+PKM N
Sbjct: 156 SAFEKLDSVFGTFDKPSEKKKGYVLPRPKMVNA 188
>gi|443898791|dbj|GAC76125.1| ribosomal protein RPL1/RPL2/RL4L4 [Pseudozyma antarctica T-34]
Length = 432
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y KD G+ KAFRN+PGVEL SV +LNLL+LAPGGH+GRFVI+T+S
Sbjct: 264 LRNRRHTQRRGPLVIYNKDAGIVKAFRNVPGVELCSVERLNLLQLAPGGHLGRFVIFTQS 323
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD ++ + K G+++P+ K+ANT
Sbjct: 324 AFGRLDEVFAA-------KSGFTMPKAKIANT 348
>gi|146170339|ref|XP_001017488.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila]
gi|353678144|sp|P0DJ55.1|RL4_TETTS RecName: Full=60S ribosomal protein L4
gi|358440088|pdb|4A17|C Chain C, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 2.
gi|358440134|pdb|4A1A|C Chain C, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 3.
gi|358440180|pdb|4A1C|C Chain C, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 4.
gi|358440226|pdb|4A1E|C Chain C, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 1
gi|146145029|gb|EAR97243.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila
SB210]
Length = 410
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
+RNRR RRGPLVVYG ++ LT+A RNIPGV++ +V++LNLL+LAPGGHVGRF+IWTE
Sbjct: 201 LRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNRLNLLQLAPGGHVGRFIIWTE 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAFKKL+ ++G++ T K GY L +P +AN
Sbjct: 261 SAFKKLNEIFGTYSTTGVQKSGYQLQRPLLAN 292
>gi|384252369|gb|EIE25845.1| hypothetical protein COCSUDRAFT_52595 [Coccomyxa subellipsoidea
C-169]
Length = 395
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 71/91 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR R+GPLVVY D G+++AFRNIPGV+L V LNLL+LAPGGH+GRF+IWT+S
Sbjct: 195 MRNRRYTTRKGPLVVYSGDSGISRAFRNIPGVDLQDVESLNLLQLAPGGHLGRFIIWTKS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF +LD ++G+ + + KKGY LP+ +M N
Sbjct: 255 AFDRLDEIFGTTEEASKQKKGYKLPRGQMTN 285
>gi|156841505|ref|XP_001644125.1| hypothetical protein Kpol_1053p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156114761|gb|EDO16267.1| hypothetical protein Kpol_1053p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 362
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KAFRN+PGVE +V+ L+LL+LAPG H+GRFVIWTESA
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKAFRNVPGVETANVASLSLLQLAPGAHLGRFVIWTESA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQ 86
F KLD ++GS +T A K GYSLPQ
Sbjct: 255 FAKLDQVWGS-ETVASSKAGYSLPQ 278
>gi|293332597|ref|NP_001168309.1| hypothetical protein [Zea mays]
gi|223947375|gb|ACN27771.1| unknown [Zea mays]
gi|414883761|tpg|DAA59775.1| TPA: hypothetical protein ZEAMMB73_492454 [Zea mays]
Length = 403
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + + KAFRN+PGV++ +V +LNLL LAPGGH+GRFVIWT+
Sbjct: 199 MRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTQ 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF KL+ +YGS+ + KKG+ LP+PKM+N
Sbjct: 259 SAFNKLEEVYGSYDAPSQKKKGFVLPRPKMSNA 291
>gi|343429720|emb|CBQ73292.1| probable RPL4A-ribosomal protein L4-A [Sporisorium reilianum SRZ2]
Length = 362
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLV+Y KD G+ KAFRN+PGVEL SV +LNLL+LAPGGH+GRFVI+T+S
Sbjct: 194 LRNRRHTQRRGPLVIYNKDAGIVKAFRNVPGVELCSVDRLNLLQLAPGGHLGRFVIFTQS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF +LD ++ + K G+++P+ K+ANT
Sbjct: 254 AFGRLDEVFAA-------KSGFTMPKAKIANT 278
>gi|297825465|ref|XP_002880615.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326454|gb|EFH56874.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 190
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + +GPL+VYG + L KAFRNIPG++L V K +LLKLAPGGH+GRFV+WT+
Sbjct: 1 MRNRRYVSPKGPLIVYGNEGAKLVKAFRNIPGIDLCHVEKFSLLKLAPGGHLGRFVVWTK 60
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + +KKGY LP+ KM N
Sbjct: 61 SAFEKLESVYGSFEKASEMKKGYVLPRAKMVNA 93
>gi|339242771|ref|XP_003377311.1| 60S ribosomal protein L4-A [Trichinella spiralis]
gi|316973901|gb|EFV57444.1| 60S ribosomal protein L4-A [Trichinella spiralis]
Length = 387
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR Q++GPL++Y + G+ +AFRNIPG+ + V LNLLKLAPGGH+GRF IWT
Sbjct: 194 MRNRRWKQKKGPLIIYNHNNGIKQAFRNIPGISFLQVDNLNLLKLAPGGHLGRFCIWTAG 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
AFKKL+ALYG++K + LK G+ LP+PKM
Sbjct: 254 AFKKLNALYGTFKAPSQLKTGWRLPKPKM 282
>gi|116789694|gb|ABK25345.1| unknown [Picea sitchensis]
Length = 406
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + R+GPL+VY + L KAFRNIPGVE+ V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 202 MRNRRYVSRKGPLIVYATEGAKLVKAFRNIPGVEIACVDRLNLLKLAPGGHLGRFIIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD+ +G ++ ++ KKGY LP+ KM N+
Sbjct: 262 SAFEKLDSTFGGFEKESLQKKGYVLPRAKMVNS 294
>gi|148905730|gb|ABR16029.1| unknown [Picea sitchensis]
Length = 406
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + R+GPL+VY + L KAFRNIPGVE+ V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 202 MRNRRYVSRKGPLIVYATEGAKLVKAFRNIPGVEIACVDRLNLLKLAPGGHLGRFIIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KLD+ +G ++ ++ KKGY LP+ KM N+
Sbjct: 262 SAFEKLDSTFGGFEKESLQKKGYVLPRAKMVNS 294
>gi|167518295|ref|XP_001743488.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778587|gb|EDQ92202.1| predicted protein [Monosiga brevicollis MX1]
Length = 364
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 6/96 (6%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR IQRRGPLVVYGK+ G+ +AFRN+PGV+ SV LNLL+LAPGGHVGRF++WTE A
Sbjct: 196 RNRRHIQRRGPLVVYGKNTGVVEAFRNLPGVDTCSVDALNLLQLAPGGHVGRFIVWTEDA 255
Query: 62 FKKLDALYGSWKTKAPLKKG------YSLPQPKMAN 91
F KLD L+G+ ++ A Y +P+ KMAN
Sbjct: 256 FNKLDTLFGTQESPADESAKKRRNAPYHMPRHKMAN 291
>gi|313217111|emb|CBY38286.1| unnamed protein product [Oikopleura dioica]
gi|313225068|emb|CBY20861.1| unnamed protein product [Oikopleura dioica]
Length = 350
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 6/98 (6%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+Q+RGPLVVY D G+ +A RNIPGV L+ V +LNLLKLAPGGHVGRF ++T +
Sbjct: 196 MRNRRRVQKRGPLVVYQNDDGIVQAMRNIPGVTLLPVDQLNLLKLAPGGHVGRFTVYTAN 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AFK LD +Y S KKG+S+P+P +AN QR++
Sbjct: 256 AFKALDTVYSSAN-----KKGFSMPRPILANADLQRIL 288
>gi|149239628|ref|XP_001525690.1| 60S ribosomal protein L4-B [Lodderomyces elongisporus NRRL YB-4239]
gi|146451183|gb|EDK45439.1| 60S ribosomal protein L4-B [Lodderomyces elongisporus NRRL YB-4239]
Length = 363
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVYG+D+GL KA RNIPGVE SV L LL+LAPG H+GRF+IWTES
Sbjct: 195 LRGRRFTQRRGPLVVYGEDKGLVKALRNIPGVETSSVKHLGLLQLAPGAHLGRFIIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A + LD++YGS TK+ +K YSLP ++NT
Sbjct: 255 AIEALDSIYGSESTKS-IKSNYSLPANIISNT 285
>gi|367013374|ref|XP_003681187.1| 60S ribosomal protein L4 [Torulaspora delbrueckii]
gi|359748847|emb|CCE91976.1| hypothetical protein TDEL_0D03920 [Torulaspora delbrueckii]
Length = 362
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KAFRN+PGVE +V+ LNLL+LAPG H+GRFVIWTESA
Sbjct: 195 RNRRFTQRRGPLVVYSEDNGIVKAFRNVPGVETANVASLNLLQLAPGAHLGRFVIWTESA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F LD ++GS +T A K YSLPQ + N
Sbjct: 255 FASLDKVWGS-ETVASSKSNYSLPQSIITN 283
>gi|119598632|gb|EAW78226.1| hCG2021224 [Homo sapiens]
Length = 230
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
G ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 134 GLCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 193
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP K+ NT
Sbjct: 194 TWRKAASLKSNYNLPMHKLINT 215
>gi|294881799|ref|XP_002769500.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus
ATCC 50983]
gi|239872965|gb|EER02218.1| 60S ribosomal subunit protein L4, putative [Perkinsus marinus
ATCC 50983]
Length = 192
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 66/84 (78%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
RRGPLVVY +D GLTKAFRNIPG+EL V +LNLL++APGG GRF+IWT+ AF +L L
Sbjct: 2 RRGPLVVYAEDDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQPAFDRLQQL 61
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
+GS+++ A LK GY LP+P M N
Sbjct: 62 FGSYRSGAALKSGYRLPRPLMTNA 85
>gi|313227627|emb|CBY22774.1| unnamed protein product [Oikopleura dioica]
Length = 351
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+Q+RGPLVVY D G+ +A RNIPGV L+ V +LNLLKLAPGGHVGRF I+T
Sbjct: 196 MRNRRRVQKRGPLVVYKNDDGIVQAMRNIPGVTLLPVDQLNLLKLAPGGHVGRFTIYTSE 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AFK LD +Y S KKG+S+P+P +AN QR++
Sbjct: 256 AFKALDNVYSSAN-----KKGFSMPRPILANADLQRIL 288
>gi|308498083|ref|XP_003111228.1| CRE-RPL-4 protein [Caenorhabditis remanei]
gi|308240776|gb|EFO84728.1| CRE-RPL-4 protein [Caenorhabditis remanei]
Length = 345
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNR+ Q+ GP+V+YG+D +AFRNIPGV++++V +LNLLKLAPGGH+GR +IWTES
Sbjct: 195 LRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVLNVERLNLLKLAPGGHLGRLIIWTES 254
Query: 61 AFKKLDALYGSW-KTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG+ + LKKG+S+P P MAN+
Sbjct: 255 AFKKLDTIYGTTVANSSQLKKGWSVPLPIMANS 287
>gi|313240950|emb|CBY33256.1| unnamed protein product [Oikopleura dioica]
Length = 257
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+Q+RGPLVVY D G+ +A RNIPGV L+ V +LNLLKLAPGGHVGRF I+T
Sbjct: 102 MRNRRRVQKRGPLVVYKNDDGIVQAMRNIPGVTLLPVDQLNLLKLAPGGHVGRFTIYTSE 161
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AFK LD +Y S KKG+S+P+P +AN QR++
Sbjct: 162 AFKALDNVYSSAN-----KKGFSMPRPILANADLQRIL 194
>gi|92090659|sp|Q28346.2|RL4_CANFA RecName: Full=60S ribosomal protein L4; AltName: Full=60S ribosomal
protein L1
gi|187609301|pdb|2ZKR|CC Chain c, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
Length = 421
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFR PG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>gi|1487948|emb|CAA68182.1| ribosomal protein L4 [Canis sp.]
Length = 420
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFR PG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 205 GPCIIYNEDNGIIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 264
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 265 TWRKAASLKSNYNLPMHKMLNT 286
>gi|17508669|ref|NP_491416.1| Protein RPL-4 [Caenorhabditis elegans]
gi|3914700|sp|O02056.3|RL4_CAEEL RecName: Full=60S ribosomal protein L4
gi|373218537|emb|CCD61249.1| Protein RPL-4 [Caenorhabditis elegans]
Length = 345
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNR+ Q+ GP+V+YG+D +AFRNIPGV++++V +LNLLKLAPGGH+GR +IWTES
Sbjct: 195 LRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTES 254
Query: 61 AFKKLDALYGSW-KTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG+ + LKKG+S+P P MAN+
Sbjct: 255 AFKKLDTIYGTTVANSSQLKKGWSVPLPIMANS 287
>gi|412985202|emb|CCO20227.1| 60S ribosomal protein L4 [Bathycoccus prasinos]
Length = 400
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QR+GPLVVY D G+T+AFRNIPGVEL SV +L LL LAPGGH+GRF+IWT+S
Sbjct: 192 MRNRRYVQRKGPLVVYANDSGMTRAFRNIPGVELCSVDRLGLLSLAPGGHLGRFIIWTKS 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLP 85
AF+KLD ++G+ + KKG+ P
Sbjct: 252 AFEKLDGVFGTKAQASSSKKGWKPP 276
>gi|448083223|ref|XP_004195337.1| Piso0_005890 [Millerozyma farinosa CBS 7064]
gi|359376759|emb|CCE87341.1| Piso0_005890 [Millerozyma farinosa CBS 7064]
Length = 363
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RNIPGVE +V L LL+LAPG H+GRFVIWT+S
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNIPGVETANVKHLGLLQLAPGAHLGRFVIWTQS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GYSLP +AN+
Sbjct: 255 AFESLDSVYGSESTKS-IKSGYSLPDNIIANS 285
>gi|254577101|ref|XP_002494537.1| 60S ribosomal protein L4 [Zygosaccharomyces rouxii]
gi|238937426|emb|CAR25604.1| ZYRO0A03828p [Zygosaccharomyces rouxii]
Length = 362
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D GL KAFRN+PGVE V+ LNLL+LAPG H+GRFVIWTE A
Sbjct: 195 RNRRWTQRRGPLVVYAQDNGLVKAFRNVPGVETCDVTALNLLQLAPGAHLGRFVIWTEGA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS + A K GYSLP ++ T
Sbjct: 255 FSKLDKVWGS-EAVASAKSGYSLPSNIISTT 284
>gi|297825471|ref|XP_002880618.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
gi|297326457|gb|EFH56877.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNR + R+GPL+VYG + L KAFRNIPG++L V +L+LLKLAPGGH+GRFV+WT+
Sbjct: 189 MRNRPYVSRKGPLIVYGNEGAKLVKAFRNIPGIDLCHVERLSLLKLAPGGHLGRFVVWTK 248
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF KL+ +YGS++ + +KKGY LP+ KM N
Sbjct: 249 SAFAKLELVYGSFEMSSEMKKGYVLPRAKMVN 280
>gi|410908038|ref|XP_003967498.1| PREDICTED: 60S ribosomal protein L4-B-like [Takifugu rubripes]
Length = 369
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP +VY +D G+TKAFRNIPG+ L +V+K+NLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIVYNQDAGVTKAFRNIPGITLQNVNKMNLLRLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ + K Y+LP KM NT
Sbjct: 266 TWRKPSTQKVDYNLPMHKMTNT 287
>gi|389584262|dbj|GAB66995.1| 60S ribosomal subunit protein L4/L1 [Plasmodium cynomolgi strain B]
Length = 411
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 68/92 (73%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ R GPL++Y KD G+ KAFRNIPGV+L VSKLNLLKLAPGG +GR IW+ES
Sbjct: 196 MRNRKYRMRNGPLIIYNKDSGVKKAFRNIPGVDLCKVSKLNLLKLAPGGSIGRLCIWSES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG K KK Y LP+ MAN+
Sbjct: 256 AFKKLDIIYGRIYKKKITKKNYILPKSIMANS 287
>gi|6441068|dbj|BAA78600.1| 60S ribosomal protein L4 [Chlamydomonas sp. HS-5]
Length = 363
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 72/92 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR R+GPL+V+ D G+++AFRN+ GVE+ SV LNLL+LAPGGH+GRF +WT+S
Sbjct: 153 MRNRRYTLRKGPLIVFANDSGISRAFRNLTGVEVTSVDHLNLLQLAPGGHMGRFCVWTKS 212
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLD+++G++ + +KKGY LP+ M N+
Sbjct: 213 AFDKLDSIFGTYTKPSEVKKGYKLPRACMTNS 244
>gi|44966650|gb|AAS49558.1| ribosomal protein L4 [Latimeria chalumnae]
Length = 289
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR IQRRGP ++Y +D G+TKAFRNIPG+ L++V+KLNLL+LAPGGHVGRF IWTES
Sbjct: 169 MRNRRCIQRRGPCIIYSEDNGITKAFRNIPGITLLNVNKLNLLRLAPGGHVGRFCIWTES 228
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF++LD LYG+W+ A LK Y+LP KM NT
Sbjct: 229 AFRRLDELYGTWRKPASLKVEYNLPVRKMTNT 260
>gi|351700584|gb|EHB03503.1| 60S ribosomal protein L4 [Heterocephalus glaber]
Length = 393
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
R+GP ++Y +D G KAFR IPGV L++VSKLN+LKLAPGGHVG F IWTESAF+KLD L
Sbjct: 96 RQGPCIIYNEDNGTIKAFRKIPGVTLLNVSKLNILKLAPGGHVGHFCIWTESAFRKLDEL 155
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YG W+ A LK Y+LP K NT
Sbjct: 156 YGPWRKAASLKSNYNLPMHKTINT 179
>gi|50285453|ref|XP_445155.1| 60S ribosomal protein L4 [Candida glabrata CBS 138]
gi|49524458|emb|CAG58055.1| unnamed protein product [Candida glabrata]
Length = 362
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE + V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETVPVTALNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS +T A K GYSLP +A T
Sbjct: 255 FAKLDQVWGS-ETVASSKTGYSLPSNIVATT 284
>gi|303287893|ref|XP_003063235.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455067|gb|EEH52371.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 396
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +QRRGPLVVY D G+TKAFRNIPGVEL SV +L LL LAPGGHVGRF+IWT+
Sbjct: 192 MRNRRYVQRRGPLVVYADDDGITKAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKK 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
AF+KLDA++G+ + KKG+ P+ M
Sbjct: 252 AFEKLDAVFGTAAAASSAKKGWKPPRSIM 280
>gi|359486451|ref|XP_003633445.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L4-1-like
[Vitis vinifera]
Length = 369
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VY + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRF+IWT+
Sbjct: 168 MRNRRYISRKGPLIVYDTEGAKLVKAFRNIPGVEVANVKRLNLLKLAPGGHLGRFIIWTK 227
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SA +K+D++YGS+ + KKGY LP+ KM N
Sbjct: 228 SAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNA 260
>gi|448535068|ref|XP_003870897.1| Rpl4b ribosomal protein 4B [Candida orthopsilosis Co 90-125]
gi|380355253|emb|CCG24770.1| Rpl4b ribosomal protein 4B [Candida orthopsilosis]
Length = 363
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVYG+D+GL KA RNIPGVE SV L LL+LAPG H+GRF+IWT+S
Sbjct: 195 LRGRRFTQRRGPLVVYGEDKGLVKALRNIPGVETSSVKHLGLLQLAPGAHLGRFIIWTQS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A + LD++YGS TK+ +K YSLP ++NT
Sbjct: 255 AIEALDSIYGSESTKS-IKSNYSLPANIISNT 285
>gi|341883141|gb|EGT39076.1| CBN-RPL-4 protein [Caenorhabditis brenneri]
Length = 345
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNR+ Q+ GP+VVYG+D +AFRNIPGV++++V +LNLLKLAPGGH+GR +IWTES
Sbjct: 195 LRNRQHKQKLGPVVVYGQDAECARAFRNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTES 254
Query: 61 AFKKLDALYGSW-KTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG+ + LKKG+S+P P M N+
Sbjct: 255 AFKKLDTIYGTTVANSSQLKKGWSVPLPIMTNS 287
>gi|448087845|ref|XP_004196427.1| Piso0_005890 [Millerozyma farinosa CBS 7064]
gi|359377849|emb|CCE86232.1| Piso0_005890 [Millerozyma farinosa CBS 7064]
Length = 363
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RNIPGVE +V L LL+LAPG H+GRFVIWT+S
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNIPGVETANVKHLGLLQLAPGAHLGRFVIWTQS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GYSLP ++N+
Sbjct: 255 AFESLDSVYGSESTKS-IKSGYSLPDNIISNS 285
>gi|367006671|ref|XP_003688066.1| 60S ribosomal protein L4 [Tetrapisispora phaffii CBS 4417]
gi|357526373|emb|CCE65632.1| hypothetical protein TPHA_0M00570 [Tetrapisispora phaffii CBS 4417]
Length = 362
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KAFRN+PGVE +V+ LNLL+LAPG H+GRFVIWTE A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKAFRNVPGVETANVTALNLLQLAPGAHLGRFVIWTEGA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS +T A K GY+LP+ ++ T
Sbjct: 255 FAKLDQVWGS-ETVASSKAGYTLPKNIISTT 284
>gi|326524301|dbj|BAK00534.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 71/91 (78%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR + RRGPLVV+ +D G+++AFRN+PGVEL V +LNLL+LAPG H+GRF+IWT+S
Sbjct: 197 LRGRRHVARRGPLVVFNEDHGISQAFRNLPGVELCQVERLNLLQLAPGAHLGRFIIWTKS 256
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LDA++GS + + KK Y LP + N
Sbjct: 257 AFERLDAIWGSTRRASSTKKDYKLPHNLLTN 287
>gi|354548326|emb|CCE45062.1| hypothetical protein CPAR2_700660 [Candida parapsilosis]
Length = 363
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVYG+D+GL KA RNIPGVE SV L LL+LAPG H+GRF+IWT+S
Sbjct: 195 LRGRRFTQRRGPLVVYGEDKGLVKALRNIPGVETSSVKHLGLLQLAPGAHLGRFIIWTQS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A + LD++YGS TK+ +K YSLP ++NT
Sbjct: 255 AIEALDSVYGSESTKS-IKSNYSLPANIISNT 285
>gi|146417697|ref|XP_001484816.1| hypothetical protein PGUG_02545 [Meyerozyma guilliermondii ATCC
6260]
gi|146390289|gb|EDK38447.1| hypothetical protein PGUG_02545 [Meyerozyma guilliermondii ATCC
6260]
Length = 362
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY KD GLTKA RNIPGVE V L LL+LAPG H+GRFVIWT+S
Sbjct: 194 LRGRRFTQRRGPLVVYAKDNGLTKALRNIPGVETSDVKHLGLLQLAPGAHLGRFVIWTQS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A + LD++YGS TK+ +K YSLP + NT
Sbjct: 254 AIESLDSIYGSESTKS-IKSNYSLPNNIITNT 284
>gi|221057215|ref|XP_002259745.1| 60S ribosomal subunit protein L4/L1 [Plasmodium knowlesi strain H]
gi|193809817|emb|CAQ40521.1| 60S ribosomal subunit protein L4/L1, putative [Plasmodium knowlesi
strain H]
Length = 411
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 67/92 (72%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ R GPL++Y KD G+ KAFRNIPGV+L V+KLNLLKLAPGG +GR IW+ES
Sbjct: 196 MRNRKYRMRNGPLIIYNKDSGVKKAFRNIPGVDLCKVTKLNLLKLAPGGSIGRLCIWSES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG K KK Y LP+ M N+
Sbjct: 256 AFKKLDIMYGKIYKKEVTKKNYILPKSIMGNS 287
>gi|116488060|gb|ABJ98612.1| 60S ribosomal protein L4 [Scophthalmus maximus]
Length = 139
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 65/79 (82%)
Query: 14 VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWK 73
++Y +D G+TKAFRNIPG+ L +V++LNLL+LAPGGHVGRF IWTESAF+KLD LYG+W+
Sbjct: 2 IIYNQDAGVTKAFRNIPGITLQNVNQLNLLRLAPGGHVGRFCIWTESAFRKLDELYGTWR 61
Query: 74 TKAPLKKGYSLPQPKMANT 92
A LK Y+LP KM NT
Sbjct: 62 KPASLKVDYNLPMHKMTNT 80
>gi|323452815|gb|EGB08688.1| hypothetical protein AURANDRAFT_60076 [Aureococcus anophagefferens]
Length = 379
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVY-GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR + R+GPLV+Y KD L +A RN+PGV+L + +LNLL LAPGGHVGRF +WT
Sbjct: 196 MRNRRYVGRKGPLVIYEDKDAELPRAVRNLPGVDLCHIDRLNLLLLAPGGHVGRFCVWTS 255
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLDALYG K+ LKK YSLP+P M N
Sbjct: 256 GAFAKLDALYGGVGVKSELKKDYSLPRPCMLNA 288
>gi|401415906|ref|XP_003872448.1| putative ribosomal protein L1a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488672|emb|CBZ23919.1| putative ribosomal protein L1a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 434
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT+S
Sbjct: 256 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTKS 314
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD+++G++ + +KKG++LP P + NT R+M
Sbjct: 315 AFEQLDSIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 352
>gi|50548125|ref|XP_501532.1| 60S ribosomal protein L4 [Yarrowia lipolytica]
gi|49647399|emb|CAG81835.1| YALI0C06820p [Yarrowia lipolytica CLIB122]
Length = 363
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR QRRGPLVVY +++GL KAFRNIPGVE V LNLL+LAPG H+GRFVIWTE
Sbjct: 195 LRNRRWTQRRGPLVVYSENKGLVKAFRNIPGVETCDVRHLNLLQLAPGSHLGRFVIWTEG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD ++GS ++ A K GYSLP +AN
Sbjct: 255 AFNLLDNIWGS-ESVASAKSGYSLPANILANA 285
>gi|156094412|ref|XP_001613243.1| 60S ribosomal subunit protein L4/L1 [Plasmodium vivax Sal-1]
gi|148802117|gb|EDL43516.1| 60S ribosomal subunit protein L4/L1, putative [Plasmodium vivax]
Length = 411
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ R GPL++Y KD G+ KAFRNIPGV+L V+KLNL+KLAPGG +GR IW+ES
Sbjct: 196 MRNRKYRMRNGPLIIYSKDCGVKKAFRNIPGVDLCKVTKLNLMKLAPGGSIGRLCIWSES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG K KK Y LP+ MAN+
Sbjct: 256 AFKKLDVIYGRIFKKKITKKNYILPKSLMANS 287
>gi|401415908|ref|XP_003872449.1| putative ribosomal protein L1a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488673|emb|CBZ23920.1| putative ribosomal protein L1a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 373
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD+++G++ + +KKG++LP P + NT R+M
Sbjct: 254 AFEQLDSIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 291
>gi|363754063|ref|XP_003647247.1| hypothetical protein Ecym_6025 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890884|gb|AET40430.1| hypothetical protein Ecym_6025 [Eremothecium cymbalariae
DBVPG#7215]
Length = 363
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLV+Y +D G+ AFRNIPGVE +V+ L LL+LAPG H+GRFVIWTESA
Sbjct: 195 RNRRFTQRRGPLVIYSEDNGIVNAFRNIPGVETANVASLGLLQLAPGAHLGRFVIWTESA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS ++ A +K GYSLP ++ T
Sbjct: 255 FAKLDQVWGS-ESVASVKSGYSLPTNIISTT 284
>gi|365982323|ref|XP_003667995.1| ribosomal protein L4 [Naumovozyma dairenensis CBS 421]
gi|343766761|emb|CCD22752.1| hypothetical protein NDAI_0A05970 [Naumovozyma dairenensis CBS 421]
Length = 362
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRFTQRRGPLVVYAQDNGIVKALRNVPGVETTNVTSLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS +T A K GY+LP ++ T
Sbjct: 255 FAKLDQVWGS-ETVASSKVGYTLPSHIISQT 284
>gi|402593131|gb|EJW87058.1| 60S ribosomal protein L4 [Wuchereria bancrofti]
Length = 391
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + GPLVVY +D G+ KAFRNIPGV L+ V KLNLLK+APGGH+GR +IWTESA
Sbjct: 196 RNRRYKAKLGPLVVYNQDNGVVKAFRNIPGVHLLPVDKLNLLKVAPGGHLGRLIIWTESA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLD +YG+ KA K + +P KMAN
Sbjct: 256 FRKLDRIYGTETRKAVAKAKFVMPTAKMANA 286
>gi|254564519|ref|XP_002489370.1| 60S ribosomal protein L4 [Komagataella pastoris GS115]
gi|238029166|emb|CAY67086.1| Protein component of the large (60S) ribosomal subunit, nearly
identical to Rpl4Ap [Komagataella pastoris GS115]
gi|328349799|emb|CCA36199.1| 60S ribosomal protein L4-B [Komagataella pastoris CBS 7435]
Length = 339
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPL+V+ +D+GL KA RNIPGVE +V L LL+LAPG H+GRFVIWTESA
Sbjct: 196 RNRRFTQRRGPLIVFNEDKGLVKALRNIPGVETCNVRTLGLLQLAPGAHLGRFVIWTESA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F LD++YGS T++ +K YSLP+ + NT
Sbjct: 256 FAALDSVYGSETTES-VKSNYSLPKNIITNT 285
>gi|328849864|gb|EGF99037.1| hypothetical protein MELLADRAFT_50803 [Melampsora larici-populina
98AG31]
Length = 377
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 66/80 (82%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGS 71
PL++Y +D+G+T+AFRN+PGVE+ISV +LNLL+LAPGGH+GRF IWT SAF +LD LYG+
Sbjct: 205 PLIIYNEDKGITRAFRNLPGVEIISVHRLNLLQLAPGGHIGRFCIWTASAFAQLDDLYGT 264
Query: 72 WKTKAPLKKGYSLPQPKMAN 91
+ + LK GYSLP K+ N
Sbjct: 265 YDKPSALKSGYSLPISKVGN 284
>gi|50303803|ref|XP_451848.1| 60S ribosomal protein L4 [Kluyveromyces lactis NRRL Y-1140]
gi|49640980|emb|CAH02241.1| KLLA0B07139p [Kluyveromyces lactis]
Length = 363
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KAFRN+PGVE +V+ L LL+LAPG H+GRFVIWT+SA
Sbjct: 195 RNRRFTQRRGPLVVYSEDNGVVKAFRNVPGVETANVASLGLLQLAPGAHLGRFVIWTQSA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A +K GY+LP
Sbjct: 255 FSKLDQIWGS-ETVASVKAGYALP 277
>gi|384494380|gb|EIE84871.1| hypothetical protein RO3G_09581 [Rhizopus delemar RA 99-880]
Length = 377
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y +D GL KAFRN+PG+EL++V +LNLL+LAPGGH+GRF+IWT+SAF LD LYG
Sbjct: 206 GPLVIYNEDNGLVKAFRNLPGLELVNVRRLNLLQLAPGGHLGRFIIWTQSAFTLLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+++T A LKK Y LP M N
Sbjct: 266 TYETPAALKKDYVLPAHIMTN 286
>gi|366988409|ref|XP_003673971.1| hypothetical protein NCAS_0A10320 [Naumovozyma castellii CBS 4309]
gi|342299834|emb|CCC67590.1| hypothetical protein NCAS_0A10320 [Naumovozyma castellii CBS 4309]
Length = 362
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAQDNGIVKALRNVPGVETTNVTSLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GYSLP
Sbjct: 255 FAKLDQVWGS-ETVASSKVGYSLP 277
>gi|45185016|ref|NP_982734.1| 60S ribosomal protein L4 [Ashbya gossypii ATCC 10895]
gi|44980637|gb|AAS50558.1| AAR191Cp [Ashbya gossypii ATCC 10895]
gi|374105934|gb|AEY94845.1| FAAR191Cp [Ashbya gossypii FDAG1]
Length = 390
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ AFRNIPGVE +V+ L LL+LAPG H+GRFVIWTESA
Sbjct: 222 RNRRFTQRRGPLVVYAEDNGIVNAFRNIPGVETANVASLGLLQLAPGAHLGRFVIWTESA 281
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS ++ A K GYSLP
Sbjct: 282 FAKLDQIWGS-ESVASAKSGYSLP 304
>gi|384490471|gb|EIE81693.1| hypothetical protein RO3G_06398 [Rhizopus delemar RA 99-880]
Length = 377
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y +D GL KAFRN+PG+EL++V +LNLL+LAPGGH+GRF+IWT+SAF LD LYG
Sbjct: 206 GPLVIYNEDNGLVKAFRNLPGLELVNVRRLNLLQLAPGGHLGRFIIWTQSAFALLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+++T A LKK Y LP M N
Sbjct: 266 TYETPATLKKDYVLPAHIMTN 286
>gi|312065488|ref|XP_003135815.1| 60S ribosomal protein L4 [Loa loa]
gi|307769036|gb|EFO28270.1| 60S ribosomal protein L4 [Loa loa]
Length = 394
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 67/91 (73%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + GPL+VY +D G+ KAFRNIPGV L+ V LNLLK+APGGH+GR +IWTESA
Sbjct: 196 RNRRHKAKLGPLIVYSQDNGIVKAFRNIPGVHLLPVDHLNLLKVAPGGHLGRLIIWTESA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLD +YG+ KA K + +P KMAN
Sbjct: 256 FRKLDLIYGTETRKAVAKAKFVMPTAKMANA 286
>gi|50411126|ref|XP_457019.1| 60S ribosomal protein L4 [Debaryomyces hansenii CBS767]
gi|49652684|emb|CAG85004.1| DEHA2B01210p [Debaryomyces hansenii CBS767]
Length = 363
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+TKA RN+PGVE V L LL+LAPG H+GRFVIWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGITKALRNVPGVETSDVKHLGLLQLAPGAHLGRFVIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GY+LP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-IKTGYTLPSNIISNT 285
>gi|389593877|ref|XP_003722187.1| putative ribosomal protein L1a [Leishmania major strain Friedlin]
gi|389593879|ref|XP_003722188.1| putative ribosomal protein L1a [Leishmania major strain Friedlin]
gi|321438685|emb|CBZ12444.1| putative ribosomal protein L1a [Leishmania major strain Friedlin]
gi|321438686|emb|CBZ12446.1| putative ribosomal protein L1a [Leishmania major strain Friedlin]
Length = 373
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTQS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD ++G++ + +KKG++LP P + NT R+M
Sbjct: 254 AFEQLDKIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 291
>gi|384491151|gb|EIE82347.1| hypothetical protein RO3G_07052 [Rhizopus delemar RA 99-880]
Length = 377
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y +D GL KAFRN+PG+EL++V +LNLL+LAPGGH+GRF+IWT+SAF LD LYG
Sbjct: 206 GPLVIYNEDNGLVKAFRNLPGLELVNVRRLNLLQLAPGGHLGRFIIWTQSAFALLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+++T A LKK Y LP M N
Sbjct: 266 TYETPATLKKDYVLPAHIMTN 286
>gi|330800965|ref|XP_003288502.1| 60S ribosomal protein L4 [Dictyostelium purpureum]
gi|325081462|gb|EGC34977.1| 60S ribosomal protein L4 [Dictyostelium purpureum]
Length = 368
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 72/90 (80%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR R+GPLVV L AFRNIPGVE+ +V +LNLLKLAPGGH+GRF+IWT+SA
Sbjct: 196 RNRRYKVRKGPLVVTTGKSKLALAFRNIPGVEIANVQRLNLLKLAPGGHLGRFIIWTKSA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F++LD ++G+++ K+ KKGY+LP+P MAN
Sbjct: 256 FEQLDQVFGTFEKKSTQKKGYTLPRPVMAN 285
>gi|68482001|ref|XP_715018.1| likely cytosolic ribosomal protein L4 [Candida albicans SC5314]
gi|46436620|gb|EAK95979.1| likely cytosolic ribosomal protein L4 [Candida albicans SC5314]
gi|238878218|gb|EEQ41856.1| 60S ribosomal protein L4-B [Candida albicans WO-1]
Length = 363
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RN+PGVE SV L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNVPGVETASVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GY+LP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-IKSGYTLPSNIISNT 285
>gi|440902496|gb|ELR53284.1| hypothetical protein M91_17941 [Bos grunniens mutus]
Length = 370
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELIS-VSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
GP ++Y +D G+ KAFRNIPG+ L++ VSKLN+LKLAPGGHVGRF IWTESAF+KLD LY
Sbjct: 153 GPCIIYNEDNGIIKAFRNIPGITLLNLVSKLNILKLAPGGHVGRFCIWTESAFQKLDELY 212
Query: 70 GSWKTKAPLKKGYSLPQPKMANT 92
G+W A LK Y+L KM NT
Sbjct: 213 GTWHKAASLKSNYNLLMHKMLNT 235
>gi|241950449|ref|XP_002417947.1| 60S ribosomal protein L4 [Candida dubliniensis CD36]
gi|223641285|emb|CAX45665.1| 60S ribosomal protein L4 subunit, putative [Candida dubliniensis
CD36]
Length = 363
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RN+PGVE SV L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNVPGVETASVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GY+LP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-IKSGYTLPSNIISNT 285
>gi|344302340|gb|EGW32645.1| hypothetical protein SPAPADRAFT_61704 [Spathaspora passalidarum
NRRL Y-27907]
Length = 359
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RN+PGVE SV L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNVPGVETASVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GY+LP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-IKTGYALPSNIISNT 285
>gi|242211343|ref|XP_002471510.1| 60S ribosomal protein L4/L1/L2 [Postia placenta Mad-698-R]
gi|220729369|gb|EED83244.1| 60S ribosomal protein L4/L1/L2 [Postia placenta Mad-698-R]
Length = 372
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 69/81 (85%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D+G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTESAF LD ++G
Sbjct: 204 GPLVVYNEDKGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTESAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + LKKG++LP K++N
Sbjct: 264 TFDKASLLKKGFTLPTAKISN 284
>gi|385682599|gb|AFI71065.1| 60S ribosomal protein, partial [Pomatoschistus minutus]
Length = 124
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGS 71
P ++Y +D G+TKAFRNIPG+ L +V+KLNLL++APGGHVGRF IWTESAF+KLD LYG+
Sbjct: 1 PCLIYNQDAGVTKAFRNIPGITLQNVNKLNLLRIAPGGHVGRFCIWTESAFRKLDELYGT 60
Query: 72 WKTKAPLKKGYSLPQPKMANTK-QRVM 97
W+ + K Y+LP KM NT R+M
Sbjct: 61 WRKPSTQKVDYNLPMHKMTNTDLSRIM 87
>gi|339898788|ref|XP_003392686.1| putative ribosomal protein L1a [Leishmania infantum JPCM5]
gi|321398509|emb|CBZ08868.1| putative ribosomal protein L1a [Leishmania infantum JPCM5]
Length = 373
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD ++G++ + +KKG++LP P + NT R+M
Sbjct: 254 AFEQLDKIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 291
>gi|255728927|ref|XP_002549389.1| 60S ribosomal protein L4-B [Candida tropicalis MYA-3404]
gi|240133705|gb|EER33261.1| 60S ribosomal protein L4-B [Candida tropicalis MYA-3404]
Length = 363
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RN+PGVE SV L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAQDNGIVKALRNVPGVETASVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GY+LP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-VKSGYTLPANIISNT 285
>gi|365761561|gb|EHN03206.1| Rpl4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365762096|gb|EHN03706.1| Rpl4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840156|gb|EJT43063.1| RPL4A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 362
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FSKLDQVWGS-ETVASSKVGYTLP 277
>gi|398364991|ref|NP_010295.3| ribosomal 60S subunit protein L4B [Saccharomyces cerevisiae S288c]
gi|1350714|sp|P49626.2|RL4B_YEAST RecName: Full=60S ribosomal protein L4-B; AltName: Full=L2;
AltName: Full=RP2; AltName: Full=YL2
gi|270346345|pdb|2WW9|H Chain H, Cryo-Em Structure Of The Active Yeast Ssh1 Complex Bound
To The Yeast 80s Ribosome
gi|270346360|pdb|2WWA|H Chain H, Cryo-Em Structure Of Idle Yeast Ssh1 Complex Bound To The
Yeast 80s Ribosome
gi|270346375|pdb|2WWB|H Chain H, Cryo-Em Structure Of The Mammalian Sec61 Complex Bound To
The Actively Translating Wheat Germ 80s Ribosome
gi|642817|emb|CAA88072.1| Rlp2bp [Saccharomyces cerevisiae]
gi|1216219|emb|CAA65204.1| 60S ribosomal protein [Saccharomyces cerevisiae]
gi|1431432|emb|CAA98832.1| RPL4B [Saccharomyces cerevisiae]
gi|45271030|gb|AAS56896.1| YDR012W [Saccharomyces cerevisiae]
gi|151942001|gb|EDN60357.1| ribosomal protein L4B [Saccharomyces cerevisiae YJM789]
gi|190405011|gb|EDV08278.1| ribosomal protein L4B [Saccharomyces cerevisiae RM11-1a]
gi|259145256|emb|CAY78520.1| Rpl4bp [Saccharomyces cerevisiae EC1118]
gi|285811034|tpg|DAA11858.1| TPA: ribosomal 60S subunit protein L4B [Saccharomyces cerevisiae
S288c]
gi|365766525|gb|EHN08021.1| Rpl4bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|339898784|ref|XP_001466636.2| putative ribosomal protein L1a [Leishmania infantum JPCM5]
gi|339898786|ref|XP_003392685.1| putative ribosomal protein L1a [Leishmania infantum JPCM5]
gi|398018739|ref|XP_003862534.1| ribosomal protein L1a, putative [Leishmania donovani]
gi|321398507|emb|CAM69676.2| putative ribosomal protein L1a [Leishmania infantum JPCM5]
gi|321398508|emb|CBZ08867.1| putative ribosomal protein L1a [Leishmania infantum JPCM5]
gi|322500764|emb|CBZ35841.1| ribosomal protein L1a, putative [Leishmania donovani]
Length = 373
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD ++G++ + +KKG++LP P + NT R+M
Sbjct: 254 AFEQLDKIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 291
>gi|190408801|gb|EDV12066.1| ribosomal protein L4A [Saccharomyces cerevisiae RM11-1a]
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FAKLDQVWGS-ETVASSKVGYTLP 277
>gi|6319505|ref|NP_009587.1| ribosomal 60S subunit protein L4A [Saccharomyces cerevisiae S288c]
gi|585880|sp|P10664.4|RL4A_YEAST RecName: Full=60S ribosomal protein L4-A; AltName: Full=L2;
AltName: Full=RP2; AltName: Full=YL2
gi|315113348|pdb|3IZS|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113529|pdb|3O58|D Chain D, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113574|pdb|3O5H|D Chain D, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|365767254|pdb|3U5E|C Chain C, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome A
gi|365767295|pdb|3U5I|C Chain C, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
gi|410562481|pdb|4B6A|C Chain C, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
gi|498759|emb|CAA53687.1| ribosomal protein L2B [Saccharomyces cerevisiae]
gi|536244|emb|CAA84973.1| RPL2A [Saccharomyces cerevisiae]
gi|151946423|gb|EDN64645.1| ribosomal protein L4A [Saccharomyces cerevisiae YJM789]
gi|256269011|gb|EEU04353.1| Rpl4ap [Saccharomyces cerevisiae JAY291]
gi|285810367|tpg|DAA07152.1| TPA: ribosomal 60S subunit protein L4A [Saccharomyces cerevisiae
S288c]
gi|290878048|emb|CBK39107.1| Rpl4ap [Saccharomyces cerevisiae EC1118]
gi|323305579|gb|EGA59320.1| Rpl4bp [Saccharomyces cerevisiae FostersB]
gi|323306083|gb|EGA59817.1| Rpl4ap [Saccharomyces cerevisiae FostersB]
gi|323334261|gb|EGA75643.1| Rpl4bp [Saccharomyces cerevisiae AWRI796]
gi|323334523|gb|EGA75897.1| Rpl4ap [Saccharomyces cerevisiae AWRI796]
gi|323338370|gb|EGA79597.1| Rpl4ap [Saccharomyces cerevisiae Vin13]
gi|323349673|gb|EGA83888.1| Rpl4ap [Saccharomyces cerevisiae Lalvin QA23]
gi|323356302|gb|EGA88106.1| Rpl4ap [Saccharomyces cerevisiae VL3]
gi|349576409|dbj|GAA21580.1| K7_Rpl4ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|349577082|dbj|GAA22251.1| K7_Rpl4bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767089|gb|EHN08577.1| Rpl4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|1587588|prf||2206497L ribosomal protein L2B
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|388578930|gb|EIM19261.1| hypothetical protein WALSEDRAFT_30494 [Wallemia sebi CBS 633.66]
Length = 371
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D+G+TKAFRN+PGVEL +V +LNLL+LAPGGH+GRF++WTE AFK LD ++G
Sbjct: 204 GPLVVYDEDKGITKAFRNLPGVELCNVRRLNLLQLAPGGHIGRFIVWTEGAFKLLDEIFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
++ + K GY+LP+ K+AN
Sbjct: 264 TFDKPSAQKLGYTLPRAKIANA 285
>gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
In File 1s1h
Length = 361
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 194 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 253
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 254 FTKLDQVWGS-ETVASSKVGYTLP 276
>gi|323349506|gb|EGA83730.1| Rpl4bp [Saccharomyces cerevisiae Lalvin QA23]
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|323355793|gb|EGA87607.1| Rpl4bp [Saccharomyces cerevisiae VL3]
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|444721659|gb|ELW62383.1| 60S ribosomal protein L4 [Tupaia chinensis]
Length = 399
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYS 83
+W+ A LK Y+
Sbjct: 266 TWRKSASLKSNYN 278
>gi|323309497|gb|EGA62708.1| Rpl4bp [Saccharomyces cerevisiae FostersO]
Length = 362
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|409078568|gb|EKM78931.1| hypothetical protein AGABI1DRAFT_114469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 371
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D+G+ KAFRNIPGVELI+V +LNLL+LAPGGH+GRFVIWTE AFK LD ++G
Sbjct: 204 GPLVVYNEDKGIVKAFRNIPGVELINVRRLNLLQLAPGGHLGRFVIWTEGAFKALDDVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K++N
Sbjct: 264 TFDKASSYKKDYLLPTAKISN 284
>gi|307102863|gb|EFN51129.1| hypothetical protein CHLNCDRAFT_37552, partial [Chlorella
variabilis]
Length = 305
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 69/83 (83%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
R+GPLV+YG D G+++AFRN+PGVE+ SV +LNLL+LAPGGH+GRF IWT+SA +KLDA+
Sbjct: 165 RKGPLVIYGNDSGISRAFRNLPGVEVCSVERLNLLQLAPGGHLGRFCIWTKSAVEKLDAI 224
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
+G+ ++ + K GY LP+ MAN
Sbjct: 225 FGTTESASAQKAGYKLPRHIMAN 247
>gi|426199599|gb|EKV49524.1| hypothetical protein AGABI2DRAFT_201934 [Agaricus bisporus var.
bisporus H97]
Length = 371
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D+G+ KAFRNIPGVELI+V +LNLL+LAPGGH+GRFVIWTE AFK LD ++G
Sbjct: 204 GPLVVYNEDKGIVKAFRNIPGVELINVRRLNLLQLAPGGHLGRFVIWTEGAFKALDDVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K++N
Sbjct: 264 TFDKASSYKKDYLLPTAKISN 284
>gi|170578226|ref|XP_001894323.1| 60S ribosomal protein L4 [Brugia malayi]
gi|158599144|gb|EDP36835.1| 60S ribosomal protein L4, putative [Brugia malayi]
Length = 385
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 68/91 (74%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + GPLVVY +D G+ KAFRNIPGV L+ V KLNLLK+APGGH+GR +IWTESA
Sbjct: 196 RNRRYKAKLGPLVVYNQDNGVVKAFRNIPGVHLLPVDKLNLLKVAPGGHLGRLIIWTESA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KL+ +YG+ KA K + +P KMAN
Sbjct: 256 FRKLNRIYGTETRKAVAKAKFVMPTAKMANA 286
>gi|393239466|gb|EJD46998.1| hypothetical protein AURDEDRAFT_113598 [Auricularia delicata
TFB-10046 SS5]
Length = 374
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 65/81 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY D G++KAFRNIPGVE SV +LNLL+LAPGGH+GRF+IWTESAF KLD ++G
Sbjct: 204 GPLIVYANDNGVSKAFRNIPGVETSSVDRLNLLQLAPGGHLGRFIIWTESAFAKLDTIFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+ +T + +KK + LP K+ N
Sbjct: 264 TTETASAVKKDFYLPTSKIHN 284
>gi|126274606|ref|XP_001387609.1| 60S ribosomal protein L4 [Scheffersomyces stipitis CBS 6054]
gi|126213479|gb|EAZ63586.1| ribosomal protein L4/L1e [Scheffersomyces stipitis CBS 6054]
Length = 363
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D G+ KA RN+PGVE V L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYSQDNGIVKALRNVPGVETSDVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K GYSLP ++NT
Sbjct: 255 AFESLDSVYGSDSTKS-VKSGYSLPANIISNT 285
>gi|393221595|gb|EJD07080.1| 60S ribosomal protein L4/L1/L2 [Fomitiporia mediterranea MF3/22]
Length = 374
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 68/81 (83%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D G+ KAFRN+PGVE+++VS+LNLL+LAPGGH+GRF+IWTE+AF +LD ++G
Sbjct: 204 GPLIVYLEDNGIVKAFRNLPGVEVVNVSRLNLLQLAPGGHIGRFIIWTEAAFARLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ T A KK Y LP K++N
Sbjct: 264 TFDTAAVQKKDYFLPTAKISN 284
>gi|154341014|ref|XP_001566460.1| putative ribosomal protein L1a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|154341020|ref|XP_001566463.1| putative ribosomal protein L1a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063783|emb|CAM39971.1| putative ribosomal protein L1a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063786|emb|CAM39974.1| putative ribosomal protein L1a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 373
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +VS LNLL LAPGGHVGRFVIWT++
Sbjct: 195 MRNRRYVARRGPMLVMPNNQG-TRAFRNIFGLDLANVSALNLLHLAPGGHVGRFVIWTKT 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF++LD ++G++ + +KKG++LP P + NT R+M
Sbjct: 254 AFEQLDKIFGTFTEASAVKKGFTLPAPMLTNTDVTRIM 291
>gi|324513506|gb|ADY45549.1| 60S ribosomal protein L4, partial [Ascaris suum]
Length = 505
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 69/90 (76%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + GP+VVY +D G+ KAFRNIPGV+L V +LNLLK+APGGH+GR +IWTESA
Sbjct: 352 RNRRYKSKLGPVVVYSQDNGVVKAFRNIPGVDLQCVDRLNLLKIAPGGHMGRLIIWTESA 411
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F+KLD +YG+ K+ K +++P+ KM N
Sbjct: 412 FRKLDLIYGTEVRKSVAKASFTMPRAKMCN 441
>gi|403166693|ref|XP_003326573.2| 60S ribosomal protein L4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166674|gb|EFP82154.2| large subunit ribosomal protein L4e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 445
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGS 71
PLV+Y +D+G+ +AFRNIPGVEL+ V +LNLL+LAPGGH+GRF IWT+ AF +LD LYG+
Sbjct: 274 PLVIYNEDKGIVRAFRNIPGVELVCVHRLNLLQLAPGGHIGRFCIWTQGAFAQLDELYGT 333
Query: 72 WKTKAPLKKGYSLPQPKMAN 91
+ A LKK +SLP K++N
Sbjct: 334 YDKPATLKKDFSLPVSKVSN 353
>gi|357608927|gb|EHJ66216.1| ribosomal protein L4 [Danaus plexippus]
Length = 455
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 64/68 (94%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR++QR+GPL+VY KD+GL+KAFRNIPGVE ISV+KLNLLKLAPGGH+GRF+IWT+S
Sbjct: 153 MRNRRKLQRKGPLIVYHKDQGLSKAFRNIPGVETISVNKLNLLKLAPGGHIGRFIIWTKS 212
Query: 61 AFKKLDAL 68
AF++L L
Sbjct: 213 AFERLGPL 220
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMANT 92
D L+GSWKT + LKKG++LPQPKMANT
Sbjct: 302 DPLFGSWKTPSKLKKGFNLPQPKMANT 328
>gi|324506269|gb|ADY42681.1| 60S ribosomal protein L4 [Ascaris suum]
Length = 281
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + GP +VYG+D G+ +AFRNIPGVEL V +LNLL++APGGH GR +IWTESA
Sbjct: 103 RNRRYRSKVGPAIVYGQDSGVVRAFRNIPGVELQCVDRLNLLRIAPGGHAGRLIIWTESA 162
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F+KLD +YG+ K+ +K + +P KM N
Sbjct: 163 FRKLDIIYGTEVRKSLMKSAFRMPASKMHNA 193
>gi|281203811|gb|EFA78007.1| 60S ribosomal protein L4 [Polysphondylium pallidum PN500]
Length = 367
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPL+V L+ AFRN+PGV++ +VS+LNLLKLAPGGH+GRFVIWT+SA
Sbjct: 196 RNRRYTIRRGPLIVCSGKSQLSHAFRNLPGVDVANVSRLNLLKLAPGGHLGRFVIWTQSA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
F++LD+++G++ K+ K G+ LP+P + N QR++
Sbjct: 256 FEQLDSIFGTYSKKSANKSGFRLPRPVLQNADVQRLI 292
>gi|410079631|ref|XP_003957396.1| hypothetical protein KAFR_0E01070 [Kazachstania africana CBS 2517]
gi|372463982|emb|CCF58261.1| hypothetical protein KAFR_0E01070 [Kazachstania africana CBS 2517]
Length = 362
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ L LL+LAPG H+GRF+IWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVTSLGLLQLAPGAHLGRFIIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GYSLP
Sbjct: 255 FAKLDQVWGS-ETVASSKAGYSLP 277
>gi|320580201|gb|EFW94424.1| 60S ribosomal protein L4-B [Ogataea parapolymorpha DL-1]
Length = 701
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPL+VYG+D+GL KAFRN+PGVE V+ L LL+LAPG H+GRFVIWTES
Sbjct: 194 LRGRRFTQRRGPLIVYGEDKGLVKAFRNLPGVETAPVTALGLLQLAPGAHLGRFVIWTES 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD++Y S K GY+LP ++NT
Sbjct: 254 AFAALDSVYQS-------KSGYALPANIVSNT 278
>gi|66817212|ref|XP_642484.1| 60S ribosomal protein L4 [Dictyostelium discoideum AX4]
gi|74856887|sp|Q54Z69.1|RL4_DICDI RecName: Full=60S ribosomal protein L4
gi|60470596|gb|EAL68575.1| 60S ribosomal protein L4 [Dictyostelium discoideum AX4]
Length = 369
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 72/90 (80%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR R+GPLVV +++A RNIPGVE+ +VS+LNLLKLAPGGH+GRF+IWT+SA
Sbjct: 196 RNRRYKVRKGPLVVVSGKTTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F++LD+ +G++ + KKGY+LP+P +AN
Sbjct: 256 FEQLDSTFGTFAKSSAQKKGYTLPRPMIAN 285
>gi|432098503|gb|ELK28222.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 152
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 64/79 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR IQ R P ++Y + G+ KAFRNIPG+ L++VSKLN+L+LAPGGHVGRF IWTES
Sbjct: 1 MRNRPPIQCREPCIIYNEGNGIIKAFRNIPGITLLNVSKLNILELAPGGHVGRFCIWTES 60
Query: 61 AFKKLDALYGSWKTKAPLK 79
AF+KLD L+G+W+ A LK
Sbjct: 61 AFRKLDELHGTWRRAASLK 79
>gi|332844102|ref|XP_001174724.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L4 isoform 1
[Pan troglodytes]
Length = 479
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 256 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 315
Query: 71 SWKTKAPLKKGYS 83
+W+ A LK Y+
Sbjct: 316 TWRKAASLKSNYN 328
>gi|183637074|gb|ACC64543.1| ribosomal protein L4 (predicted) [Rhinolophus ferrumequinum]
Length = 169
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 64/92 (69%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRN RIQ RGP ++ +D G+ KAFRNIPG+ L++VSKLN LKL PGGH+G+F WTE
Sbjct: 8 MRNCHRIQCRGPCIISNEDNGVIKAFRNIPGMTLLNVSKLNTLKLPPGGHIGQFCFWTEG 67
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A LD L G+W+ A LK Y+LP + NT
Sbjct: 68 ASHNLDNLCGTWRKAASLKSNYNLPMHRTLNT 99
>gi|407410738|gb|EKF33065.1| 60S ribosomal protein L4, putative [Trypanosoma cruzi marinkellei]
Length = 393
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRFVIWT+
Sbjct: 214 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNALNLLHLAPGGHVGRFVIWTKG 272
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD+++G++ + +KKG+ LP P + NT R+M
Sbjct: 273 AFEKLDSIFGTFTKASAVKKGFMLPAPMLTNTDVTRIM 310
>gi|344230491|gb|EGV62376.1| hypothetical protein CANTEDRAFT_107929 [Candida tenuis ATCC 10573]
Length = 363
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QRRGPLVVY +D GL KA RNIPGVE V L LL+LAPG H+GRF+IWT+
Sbjct: 195 LRGRRFTQRRGPLVVYAEDNGLVKALRNIPGVETAPVKHLGLLQLAPGAHLGRFIIWTQG 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++YGS TK+ +K Y+LP ++NT
Sbjct: 255 AFESLDSVYGSEATKS-VKSNYALPSNIISNT 285
>gi|124506063|ref|XP_001351629.1| 60S ribosomal protein L4, putative [Plasmodium falciparum 3D7]
gi|23504556|emb|CAD51436.1| 60S ribosomal protein L4, putative [Plasmodium falciparum 3D7]
Length = 411
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ R GPL++Y D G+ KAFRNIPGV+L V+KLNLLKLAPGG +GR IW+ES
Sbjct: 196 MRNRKYKIRNGPLIIYENDNGVKKAFRNIPGVDLCKVTKLNLLKLAPGGSIGRLCIWSES 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AFKKLD +YG K KK Y LP+ + N
Sbjct: 256 AFKKLDVIYGKIHEKKVTKKNYILPKSIVHN 286
>gi|68068601|ref|XP_676211.1| 60S ribosomal subunit protein L4/L1 [Plasmodium berghei strain
ANKA]
gi|56495800|emb|CAH97802.1| 60S ribosomal subunit protein L4/L1, putative [Plasmodium berghei]
Length = 411
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ GPL++Y KD G+ KAFRNIPGV+L +V+KLNLLKLAPGG +GR IW+E
Sbjct: 196 MRNRKYKISNGPLIIYNKDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSED 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AFKKLD +YG K KK Y LP+P + N
Sbjct: 256 AFKKLDVIYGKSFQKYVTKKHYILPKPIVNN 286
>gi|407850153|gb|EKG04656.1| 60S ribosomal protein L4, putative, partial [Trypanosoma cruzi]
Length = 451
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRFVIWT+
Sbjct: 272 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNALNLLHLAPGGHVGRFVIWTKG 330
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD+++G++ + +KKG+ LP P + NT R+M
Sbjct: 331 AFEKLDSIFGTFTKASTVKKGFMLPAPMLTNTDVTRIM 368
>gi|256251616|emb|CAR63711.1| putative Ribosomal Protein [Angiostrongylus cantonensis]
Length = 179
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRN+ ++ GPL++YG+D +AFRNIPGV++++V +LNLLK+APGGH+GR +IWTES
Sbjct: 29 MRNKLHKRKLGPLLIYGQDAECAQAFRNIPGVDILNVERLNLLKVAPGGHLGRLIIWTES 88
Query: 61 AFKKLDALYGSWKTK-APLKKGYSLPQPKMANT 92
AFKKLDA+YG+ K + KKG+S+P K+ N
Sbjct: 89 AFKKLDAIYGTLKANSSEQKKGWSVPLNKLTNA 121
>gi|71403432|ref|XP_804516.1| 60S ribosomal protein L4 [Trypanosoma cruzi strain CL Brener]
gi|70867532|gb|EAN82665.1| 60S ribosomal protein L4, putative [Trypanosoma cruzi]
Length = 374
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRFV+WT+
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNALNLLHLAPGGHVGRFVVWTKG 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD+++G++ + +KKG+ LP P + NT R+M
Sbjct: 254 AFEKLDSIFGTFTKASAVKKGFMLPAPMLTNTDVTRIM 291
>gi|385302091|gb|EIF46240.1| 60s ribosomal protein l4-b [Dekkera bruxellensis AWRI1499]
Length = 362
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+GPLV+Y K+ GL KAFRNIPGV+ +V LNLL+LAPG H+GRFVIW++S
Sbjct: 195 MRGRRFTQRKGPLVIYAKNNGLVKAFRNIPGVDTCNVQALNLLQLAPGXHMGRFVIWSQS 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
AF LD++YGS K+ K GY LP+
Sbjct: 255 AFGALDSIYGSETVKSS-KSGYXLPK 279
>gi|401411023|ref|XP_003884959.1| 50S ribosomal protein L4P, related [Neospora caninum Liverpool]
gi|325119378|emb|CBZ54931.1| 50S ribosomal protein L4P, related [Neospora caninum Liverpool]
Length = 416
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR RRGPLVVY +D G+T+AFRNIPGVEL V LNLL+LAPGG +GRF ++T S
Sbjct: 197 MRGRRTHIRRGPLVVYAEDNGVTRAFRNIPGVELCKVDSLNLLQLAPGGALGRFCLYTAS 256
Query: 61 AFKKLDALYG--SWKTKAPLKKGYSLPQPKMANT 92
AFK+L L+G + A LKKGY LP+ MAN
Sbjct: 257 AFKRLQLLFGRHTGSGTAQLKKGYHLPRALMANA 290
>gi|149420611|ref|XP_001521591.1| PREDICTED: 60S ribosomal protein L4-like, partial
[Ornithorhynchus anatinus]
Length = 95
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 24 GPCIIYNEDNGIIKAFRNIPGITLLNVTKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 83
Query: 71 SWKTKAPLKKGY 82
+W+ A LK Y
Sbjct: 84 TWRKAATLKSNY 95
>gi|403217692|emb|CCK72185.1| hypothetical protein KNAG_0J01030 [Kazachstania naganishii CBS
8797]
Length = 362
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QR+GPLVVY +D G+ KA RN+PGVE +V+ L LL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRKGPLVVYAEDNGIVKALRNVPGVETANVASLGLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F KLD ++GS ++ A K GY+LP ++ T
Sbjct: 255 FTKLDQVWGS-ESVASSKAGYTLPSNIISTT 284
>gi|70952565|ref|XP_745442.1| 60S ribosomal subunit protein L4/L1 [Plasmodium chabaudi chabaudi]
gi|56525766|emb|CAH79389.1| 60S ribosomal subunit protein L4/L1, putative [Plasmodium chabaudi
chabaudi]
Length = 411
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ GPL++Y D G+ KAFRNIPGV+L +V+KLNLLKLAPGG +GR IW+E
Sbjct: 196 MRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSED 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG K KK Y LP+P + N
Sbjct: 256 AFKKLDVIYGKTFQKYVTKKNYILPKPIVNNA 287
>gi|389750390|gb|EIM91561.1| hypothetical protein STEHIDRAFT_91708 [Stereum hirsutum FP-91666
SS1]
Length = 373
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 65/81 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+G+ KAFRN+PGVE+++V +LN+L+LAPGGHVGRFVIWTE AF LD ++G
Sbjct: 204 GPLIVYNEDKGIVKAFRNLPGVEVVNVKRLNVLQLAPGGHVGRFVIWTEGAFAALDDVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ A KK Y LP K++N
Sbjct: 264 TFDKAAVYKKDYFLPTAKISN 284
>gi|237829767|ref|XP_002364181.1| 60s ribosomal protein L4, putative [Toxoplasma gondii ME49]
gi|77696463|gb|ABB00910.1| 60S ribosomal subunit protein L4 [Toxoplasma gondii]
gi|211961845|gb|EEA97040.1| 60s ribosomal protein L4, putative [Toxoplasma gondii ME49]
gi|221481095|gb|EEE19503.1| 60S ribosomal protein L4, putative [Toxoplasma gondii GT1]
gi|221507043|gb|EEE32647.1| 60S ribosomal protein L4, putative [Toxoplasma gondii VEG]
Length = 416
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR RRGPLVVY +D G+T+AFRNIPGVEL V LNLL+LAPGG +GRF ++T S
Sbjct: 197 MRGRRTHMRRGPLVVYAEDNGVTRAFRNIPGVELCKVDSLNLLQLAPGGALGRFCLYTAS 256
Query: 61 AFKKLDALYG--SWKTKAPLKKGYSLPQPKMANT 92
AFK+L L+G + A LKKGY LP+ M+N
Sbjct: 257 AFKRLQLLFGRHTGTGTAQLKKGYHLPRALMSNA 290
>gi|172413|gb|AAA34974.1| ribosomal protein L2 [Saccharomyces cerevisiae]
Length = 362
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+P VE +V+ LNLL+LAP H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPSVETANVASLNLLQLAPSAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>gi|71400338|ref|XP_803019.1| 60S ribosomal protein L4 [Trypanosoma cruzi strain CL Brener]
gi|70865558|gb|EAN81573.1| 60S ribosomal protein L4, putative [Trypanosoma cruzi]
Length = 185
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRFV+WT+
Sbjct: 6 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNALNLLHLAPGGHVGRFVVWTKG 64
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD+++G++ + +KKG+ LP P + NT R+M
Sbjct: 65 AFEKLDSIFGTFTKASMVKKGFMLPAPMLTNTDVTRIM 102
>gi|392564433|gb|EIW57611.1| 60S ribosomal protein L4/L1/L2 [Trametes versicolor FP-101664 SS1]
Length = 372
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K++N
Sbjct: 264 TFDKASTFKKDYVLPTAKISN 284
>gi|82705099|ref|XP_726827.1| ribosomal protein L4/L1 [Plasmodium yoelii yoelii 17XNL]
gi|23482400|gb|EAA18392.1| ribosomal protein L4/L1 family, putative [Plasmodium yoelii yoelii]
Length = 411
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 65/91 (71%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ GPL++Y KD G+ KAFRNIPGV+L +V KL+LLKLAPGG +GR IW+E
Sbjct: 196 MRNRKYKISNGPLIIYSKDSGIKKAFRNIPGVDLCNVEKLSLLKLAPGGSIGRLCIWSED 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AFKKLD +YG K KK Y LP+P + N
Sbjct: 256 AFKKLDVIYGKTFQKYVTKKHYILPKPIVNN 286
>gi|206598194|gb|ACI15999.1| 60S ribosomal protein l4 [Bodo saltans]
Length = 389
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + RRGP++V+ ++G T+AFRNI G+++ +V+ LNLL LAPGGHVGRFVIWT++A
Sbjct: 213 RNRRYVARRGPMIVFPDNKG-TRAFRNIFGLDIANVNALNLLHLAPGGHVGRFVIWTKAA 271
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
F++LD ++G++ + +KKG++LP P + +T
Sbjct: 272 FEQLDKIFGTFTQASVVKKGFTLPAPMLTST 302
>gi|440804238|gb|ELR25115.1| ribosomal protein L4/L1 family [Acanthamoeba castellanii str. Neff]
Length = 386
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y + L AFRNIPGVEL SV ++NLL+LAPGGH+GRFVIWT+ AF+KLDA+YG
Sbjct: 191 GPLVIYDQKSPLVFAFRNIPGVELCSVERMNLLQLAPGGHLGRFVIWTKDAFEKLDAIYG 250
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ K+ K ++LP+P M N
Sbjct: 251 TYTKKSTEKTHFTLPRPLMTN 271
>gi|326926873|ref|XP_003209621.1| PREDICTED: 60S ribosomal protein L4-like [Meleagris gallopavo]
Length = 325
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 59/72 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ +AFRNIPG+ L+ V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 253 GPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 312
Query: 71 SWKTKAPLKKGY 82
+W+ A LK Y
Sbjct: 313 TWRKPATLKSDY 324
>gi|261327248|emb|CBH10224.1| 60S ribosomal protein L4 [Trypanosoma brucei gambiense DAL972]
Length = 328
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD ++G++ + +K G+ LP P + +T R+M
Sbjct: 254 AFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIM 291
>gi|449540498|gb|EMD31489.1| hypothetical protein CERSUDRAFT_119710 [Ceriporiopsis subvermispora
B]
Length = 373
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVYNEDNGVVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ A KK Y LP K++N
Sbjct: 264 TFDKPAVYKKNYVLPTAKISN 284
>gi|340052982|emb|CCC47268.1| putative 60S ribosomal protein L4 [Trypanosoma vivax Y486]
Length = 388
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+
Sbjct: 208 MRNRRYVARRGPMLVLPDNKG-TRAFRNIFGLDLANVNALNLLHLAPGGHVGRFIIWTKG 266
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF KLD+++G++K + +K G+ LP P + +T
Sbjct: 267 AFSKLDSIFGTFKEASSVKHGFVLPAPMLTST 298
>gi|395332528|gb|EJF64907.1| 60S ribosomal protein L4/L1/L2 [Dichomitus squalens LYAD-421 SS1]
Length = 372
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K+ N
Sbjct: 264 TFDKASTFKKDYILPTAKITN 284
>gi|378755988|gb|EHY66013.1| 60s ribosomal protein l4 [Nematocida sp. 1 ERTm2]
Length = 330
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + RRG LV+Y +D+G+T+AFRNIPG++L+ V +L+LLKLAPGGH+GR V+WTE A
Sbjct: 195 RNRRWVMRRGVLVIYKEDKGITRAFRNIPGIDLMPVDQLDLLKLAPGGHLGRLVVWTEGA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANTKQRVM 97
F++L L+G A +K GY LP+ K++ +V+
Sbjct: 255 FERLRELFGD-DGLAAVKTGYRLPESKISCADVKVL 289
>gi|261327247|emb|CBH10223.1| 60S ribosomal protein L4 [Trypanosoma brucei gambiense DAL972]
Length = 374
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD ++G++ + +K G+ LP P + +T R+M
Sbjct: 254 AFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIM 291
>gi|409049172|gb|EKM58650.1| hypothetical protein PHACADRAFT_253128 [Phanerochaete carnosa
HHB-10118-sp]
Length = 371
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVE+++V +LNLL+LAPGGH+GRFVIWT+ AF LD ++G
Sbjct: 204 GPLVVYNEDNGIVKAFRNVPGVEIVNVRRLNLLQLAPGGHLGRFVIWTQGAFALLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ T + KK Y LP K+ N
Sbjct: 264 TFDTPSVYKKDYVLPTAKITN 284
>gi|453083883|gb|EMF11928.1| 60s ribosomal protein L2 [Mycosphaerella populorum SO2202]
Length = 371
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG---LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+RNRR QRRGPLV+Y ++ L AFRNIPGVE +V LNLL+LAPGGH+GRFVIW
Sbjct: 198 LRNRRHQQRRGPLVIYEPEKDGKELVNAFRNIPGVETCTVYSLNLLQLAPGGHLGRFVIW 257
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
T SAF LD++YGS + LK+ + LPQ +A +
Sbjct: 258 TSSAFAALDSVYGSTTEPSALKRDFLLPQNLVAQS 292
>gi|401881051|gb|EJT45356.1| Ras2 [Trichosporon asahii var. asahii CBS 2479]
gi|406697003|gb|EKD00273.1| Ras2 [Trichosporon asahii var. asahii CBS 8904]
Length = 364
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVYGKD G+ +AFRN+PGVE V LNLL+LAPGGHVGRFVIWTE AFK LD +Y
Sbjct: 204 GPLVVYGKDEGIVRAFRNVPGVETSPVDALNLLQLAPGGHVGRFVIWTEDAFKALDKIYE 263
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+ K G++LP+ K++NT
Sbjct: 264 N-------KSGFTLPEAKISNT 278
>gi|403416634|emb|CCM03334.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ A KK + LP K++N
Sbjct: 264 TFDKAAVYKKNFVLPTAKISN 284
>gi|86451932|gb|ABC97361.1| RPL4 [Streblomastix strix]
Length = 492
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRG L+V+ ++ GL AFRNI GV++ +V +LN+ LAPGGH+GRF+IWTE A
Sbjct: 197 RNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGA 256
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
+KKLD LYG+ A LK Y P P + NT
Sbjct: 257 YKKLDKLYGTRFRTALLKNEYKHPTPSVTNT 287
>gi|1350685|sp|P49669.1|RL4_TRYBB RecName: Full=60S ribosomal protein L4; AltName: Full=L1
gi|1015931|emb|CAA91141.1| ribosomal protein L1 [Trypanosoma brucei]
Length = 374
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD ++G++ + +K G+ LP P + +T R+M
Sbjct: 254 AFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIM 291
>gi|72387341|ref|XP_844095.1| 60S ribosomal protein L4 [Trypanosoma brucei]
gi|449802262|pdb|3ZF7|RR Chain r, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|62360254|gb|AAX80672.1| 60S ribosomal protein L4 [Trypanosoma brucei]
gi|70800627|gb|AAZ10536.1| 60S ribosomal protein L4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 374
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD ++G++ + +K G+ LP P + +T R+M
Sbjct: 254 AFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIM 291
>gi|444728000|gb|ELW68465.1| 60S ribosomal protein L4 [Tupaia chinensis]
Length = 115
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 62/93 (66%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
M N R IQ RG +D G+ +AFR I G+ L++VSKLN+LKLA GGHVG F IWTES
Sbjct: 1 MGNPRHIQNRGLCTTSNEDTGIIEAFRKITGITLLNVSKLNILKLASGGHVGHFCIWTES 60
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK 93
AF +LD LY +W A +K Y+LP +M NT
Sbjct: 61 AFWQLDELYSTWWKSASIKSNYNLPMDRMMNTD 93
>gi|451998040|gb|EMD90505.1| hypothetical protein COCHEDRAFT_1139995 [Cochliobolus
heterostrophus C5]
Length = 371
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L AFRNIPGVE SV LNLL+LAPGGH+GRF++W
Sbjct: 197 LRGRRHKQRRGPLVIYNPDEDGKELVLAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVW 256
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
T SAF LD +YGS + LKK + LP P M
Sbjct: 257 TSSAFSALDKVYGSTTEPSALKKDFLLPSPMM 288
>gi|169864162|ref|XP_001838693.1| 60S ribosomal protein L4 [Coprinopsis cinerea okayama7#130]
gi|116500215|gb|EAU83110.1| Ras2 [Coprinopsis cinerea okayama7#130]
Length = 371
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWT+ AF LD +YG
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTQGAFALLDDVYG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K++N
Sbjct: 264 TFDKASVHKKDYLLPTAKISN 284
>gi|451845487|gb|EMD58799.1| hypothetical protein COCSADRAFT_102963 [Cochliobolus sativus
ND90Pr]
Length = 371
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L AFRNIPGVE SV LNLL+LAPGGH+GRF++W
Sbjct: 197 LRGRRHKQRRGPLVIYNPDEDGKELVLAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVW 256
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
T SAF LD +YGS + LKK + LP P M
Sbjct: 257 TSSAFSALDKVYGSTTEPSALKKDFLLPSPMM 288
>gi|398393150|ref|XP_003850034.1| 60S ribosomal protein L4 [Zymoseptoria tritici IPO323]
gi|339469912|gb|EGP85010.1| hypothetical protein MYCGRDRAFT_100974 [Zymoseptoria tritici
IPO323]
Length = 371
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDR---GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+RNRR QRRGPLVVY ++ L KAFRNIPGVE V LNLL+LAPGGH+GRFVIW
Sbjct: 198 LRNRRHTQRRGPLVVYEPEKDGNSLVKAFRNIPGVETCPVYALNLLQLAPGGHLGRFVIW 257
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
T SAF LD +YG+ + LK+ + LP MA
Sbjct: 258 TSSAFGALDTIYGTTTEPSALKRDFLLPTNVMA 290
>gi|379072570|gb|AFC92917.1| ribosomal protein L4, partial [Pipa carvalhoi]
Length = 282
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y +D G+ K+FRNIPG+ L++V KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 151 GPCVIYNEDNGIVKSFRNIPGITLLNVKKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 210
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ KA LK Y+LP KM NT
Sbjct: 211 TWRKKATLKADYNLPMHKMTNT 232
>gi|296085650|emb|CBI29449.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPGVE+ +V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 69 MRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTK 128
Query: 60 SAFKKLDALYGSWKTK 75
S+F+KLD++Y S++ K
Sbjct: 129 SSFEKLDSIYRSFEKK 144
>gi|396493838|ref|XP_003844166.1| similar to 60S ribosomal protein L4 [Leptosphaeria maculans JN3]
gi|312220746|emb|CBY00687.1| similar to 60S ribosomal protein L4 [Leptosphaeria maculans JN3]
Length = 371
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L AFRNIPGVE SV LNLL+LAPGGH+GRF++W
Sbjct: 197 LRGRRHKQRRGPLVIYNPDEDGKDLVLAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVW 256
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
T SAF LD +YGS + LKK Y LP M+
Sbjct: 257 TSSAFSALDTIYGSTTEPSALKKDYLLPSTIMS 289
>gi|336364020|gb|EGN92386.1| hypothetical protein SERLA73DRAFT_191258 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383098|gb|EGO24247.1| hypothetical protein SERLADRAFT_467238 [Serpula lacrymans var.
lacrymans S7.9]
Length = 375
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 65/81 (80%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVV+ +D+G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVFNEDKGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+++ + KK Y LP K+ N
Sbjct: 264 TFEKASLYKKDYLLPTAKITN 284
>gi|452841696|gb|EME43633.1| hypothetical protein DOTSEDRAFT_72860 [Dothistroma septosporum
NZE10]
Length = 371
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 12/100 (12%)
Query: 1 MRNRRRIQRRGPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFV 55
+RNRR QRRGPL++Y GKD + AFRNIPG+E SV LNLL+LAPGGH+GRFV
Sbjct: 198 LRNRRHQQRRGPLIIYEPEKDGKD--IVTAFRNIPGIETCSVYALNLLQLAPGGHLGRFV 255
Query: 56 IWTESAFKKLDALYGSWKTKAPLKKGYSLP-----QPKMA 90
IWT SAF LD +YGS + LK+ + LP QP +A
Sbjct: 256 IWTSSAFSALDTVYGSTTAPSELKRDFLLPSNVVSQPDIA 295
>gi|402224789|gb|EJU04851.1| hypothetical protein DACRYDRAFT_63104 [Dacryopinax sp. DJM-731 SS1]
Length = 369
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D G+ KAFRN+PGVE+ +V +LNLL+LAPGGH+GRF+IWTE AF LD ++G
Sbjct: 202 GPLIVYNEDNGIVKAFRNLPGVEIANVRRLNLLQLAPGGHLGRFIIWTEGAFALLDEVFG 261
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+ A LKK Y LP K++N
Sbjct: 262 TQDKAALLKKDYYLPTAKISN 282
>gi|169617367|ref|XP_001802098.1| hypothetical protein SNOG_11861 [Phaeosphaeria nodorum SN15]
gi|160703390|gb|EAT80905.2| hypothetical protein SNOG_11861 [Phaeosphaeria nodorum SN15]
Length = 372
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L KAFRNIPGVE SV +NLL+LAPGGH+GRF++W
Sbjct: 198 LRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLLQLAPGGHLGRFIVW 257
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
T SAF LD +YGS + LKK + LP M
Sbjct: 258 TSSAFGALDTIYGSTTEPSALKKDFLLPSTMM 289
>gi|302693781|ref|XP_003036569.1| 60S ribosomal protein L4 [Schizophyllum commune H4-8]
gi|300110266|gb|EFJ01667.1| hypothetical protein SCHCODRAFT_83802 [Schizophyllum commune H4-8]
Length = 370
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LN+L+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNVLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K+ N
Sbjct: 264 TFDKASTHKKDYLLPTAKITN 284
>gi|353242477|emb|CCA74118.1| probable RPL4A-ribosomal protein L4-A [Piriformospora indica DSM
11827]
Length = 370
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGS 71
PL+VY +D+G+ AFRN+PGVEL +V LNLL+LAPGGH+GRFVIWTESAF LD ++G+
Sbjct: 205 PLIVYNEDKGIVPAFRNLPGVELANVRALNLLQLAPGGHLGRFVIWTESAFSVLDEVFGT 264
Query: 72 WKTKAPLKKGYSLPQPKMAN 91
++ + K+ Y LP KMAN
Sbjct: 265 FEKASLYKRDYILPTAKMAN 284
>gi|67619485|ref|XP_667650.1| 60S ribosomal protein-like [Cryptosporidium hominis TU502]
gi|54658805|gb|EAL37421.1| 60S ribosomal protein-like [Cryptosporidium hominis]
Length = 212
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+ GPLV+Y +D G+ KA RNI GV+ SV +LNLL+LAPGG GR I+T+
Sbjct: 17 MRNRRRVCAVGPLVIYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKG 76
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
A K+L +YGS+ + K GY+LP+P M N
Sbjct: 77 AIKRLQEIYGSYTHGSSSKVGYTLPRPAMTN 107
>gi|323508547|dbj|BAJ77167.1| cgd6_3190 [Cryptosporidium parvum]
gi|323510201|dbj|BAJ77994.1| cgd6_3190 [Cryptosporidium parvum]
Length = 392
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+ GPLVVY +D G+ KA RNI GV+ SV +LNLL+LAPGG GR I+T+
Sbjct: 197 MRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKG 256
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
A K+L +YGS+ + K GY+LP+P M N
Sbjct: 257 AIKRLQEIYGSYTHGSSSKVGYTLPRPAMTN 287
>gi|387594064|gb|EIJ89088.1| 60s ribosomal protein l4 [Nematocida parisii ERTm3]
gi|387595735|gb|EIJ93358.1| 60s ribosomal protein l4 [Nematocida parisii ERTm1]
Length = 330
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR + RRG LV+Y +D+G+TKAFRNI G++L+ V +L+LLKLAPGGH+GR V+WTE A
Sbjct: 195 RNRRWVLRRGVLVIYKEDKGITKAFRNIRGIDLMPVDQLDLLKLAPGGHLGRLVVWTEGA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANTKQRVM 97
F++L L+G + +K+GY+LP+ K++ +V+
Sbjct: 255 FERLRELFGD-DGRVAVKEGYNLPESKISCPDVKVL 289
>gi|126649327|ref|XP_001388335.1| 60S ribosomal protein-like [Cryptosporidium parvum Iowa II]
gi|32398896|emb|CAD98361.1| 60S ribosomal protein-like, probable [Cryptosporidium parvum]
gi|126117429|gb|EAZ51529.1| 60S ribosomal protein-like, putative [Cryptosporidium parvum Iowa
II]
Length = 394
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+ GPLVVY +D G+ KA RNI GV+ SV +LNLL+LAPGG GR I+T+
Sbjct: 199 MRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKG 258
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
A K+L +YGS+ + K GY+LP+P M N
Sbjct: 259 AIKRLQEIYGSYTHGSSSKVGYTLPRPAMTN 289
>gi|452981926|gb|EME81685.1| hypothetical protein MYCFIDRAFT_87119 [Pseudocercospora fijiensis
CIRAD86]
Length = 371
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+RNRR QRRGPLV+Y + R L AFRNIPGVE V LNLL+LAPGGH+GRFVIW
Sbjct: 198 LRNRRHTQRRGPLVIYEPEKDGRELVTAFRNIPGVETCPVYALNLLQLAPGGHLGRFVIW 257
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLP-----QPKMA 90
T SAF LD +YGS + LK+ + LP QP +A
Sbjct: 258 TSSAFAALDTVYGSTTEPSGLKRDFLLPSNVVAQPDIA 295
>gi|344248207|gb|EGW04311.1| 60S ribosomal protein L4 [Cricetulus griseus]
Length = 286
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 54/62 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L+ VSKLN+LKLAPGGHVGRF IWTE AF+KLDALYG
Sbjct: 106 GPCIIYNEDNGIIKAFRNIPGITLLHVSKLNILKLAPGGHVGRFCIWTEGAFRKLDALYG 165
Query: 71 SW 72
+W
Sbjct: 166 TW 167
>gi|348505894|ref|XP_003440495.1| PREDICTED: 60S ribosomal protein L4-B-like [Oreochromis niloticus]
Length = 369
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 68/82 (82%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D GLTKAFRNIPG+ L++V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNQDAGLTKAFRNIPGITLLNVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKVDYNLPMHKMTNT 287
>gi|390600681|gb|EIN10076.1| hypothetical protein PUNSTDRAFT_143407 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 371
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGS 71
PLVVY KD G+ KAFRN+PGVE+++V +LNLL+LAPGGH+GRFVIWTE AF LD ++G+
Sbjct: 205 PLVVYDKDEGIVKAFRNLPGVEVVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFGT 264
Query: 72 WKTKAPLKKGYSLPQPKMAN 91
+ + KK Y LP K+ N
Sbjct: 265 FDKASVYKKDYILPTSKVTN 284
>gi|238608211|ref|XP_002397173.1| hypothetical protein MPER_02448 [Moniliophthora perniciosa FA553]
gi|215471110|gb|EEB98103.1| hypothetical protein MPER_02448 [Moniliophthora perniciosa FA553]
Length = 249
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 61/72 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR Q RGPL+VY +D G+ +AFRN+PGVEL++V +L+LL+LAPGGH+GRFVIWTE
Sbjct: 163 MRNRRHRQCRGPLIVYNEDDGIVRAFRNLPGVELVNVRRLDLLQLAPGGHLGRFVIWTEG 222
Query: 61 AFKKLDALYGSW 72
AF LD ++G++
Sbjct: 223 AFGLLDEVFGTF 234
>gi|392595091|gb|EIW84415.1| hypothetical protein CONPUDRAFT_80763 [Coniophora puteana
RWD-64-598 SS2]
Length = 375
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+V+ +D G+ KAFRN+PGVEL++V +LN+L+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 204 GPLIVFNEDNGIVKAFRNLPGVELVNVRRLNVLQLAPGGHLGRFVIWTEGAFGLLDEVFG 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K+ N
Sbjct: 264 TFDKASTYKKDYILPTAKITN 284
>gi|189188410|ref|XP_001930544.1| 60S ribosomal protein L4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972150|gb|EDU39649.1| 60S ribosomal protein L4-A [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 371
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L AFRNIPGVE SV LNLL+LAPGGH+GRF++W
Sbjct: 197 LRGRRHKQRRGPLVIYNPDEDGKELVLAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVW 256
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
T SAF LD +YGS + LKK + LP M
Sbjct: 257 TSSAFTALDKVYGSTTEPSALKKDFLLPSTMM 288
>gi|15558919|dbj|BAB64925.1| ribosomal protein L4 [Paramecium caudatum]
Length = 252
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 9 RRGPLVVY-GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
R+GPLVVY ++ L KAFRN+PGVE+++V++LNLL+LAPGG +GRFVIWT+SAF LD
Sbjct: 51 RKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDK 110
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
L+G+++ + LK GY L +P + N
Sbjct: 111 LFGTYRYSSILKDGYQLLRPLLTN 134
>gi|260942443|ref|XP_002615520.1| hypothetical protein CLUG_04402 [Clavispora lusitaniae ATCC 42720]
gi|238850810|gb|EEQ40274.1| hypothetical protein CLUG_04402 [Clavispora lusitaniae ATCC 42720]
Length = 356
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +Q++GPLVVY D G++KA RNIPGV+ VS+L LL+LAPG H+GRFVIWT++
Sbjct: 194 LRNRRFVQKKGPLVVYANDNGISKALRNIPGVDAAHVSRLGLLQLAPGAHLGRFVIWTQA 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+ LD++Y + K Y LP ++NT
Sbjct: 254 AFESLDSVYEA-------KSNYRLPSNIVSNT 278
>gi|413968492|gb|AFW90583.1| 60S ribosomal protein L4/L1 [Solanum tuberosum]
Length = 295
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRN+PGVE+ V +LNLLKLAPGGH+GRF++WT+
Sbjct: 204 MRNRRYISRKGPLIVYGTEGAKLVKAFRNLPGVEICHVDRLNLLKLAPGGHLGRFIVWTK 263
Query: 60 SAFKKLDALYGSW 72
SA++KLD +YG++
Sbjct: 264 SAYEKLDEIYGTF 276
>gi|330925322|ref|XP_003301002.1| 60S ribosomal protein L4 [Pyrenophora teres f. teres 0-1]
gi|311324565|gb|EFQ90874.1| hypothetical protein PTT_12401 [Pyrenophora teres f. teres 0-1]
Length = 371
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIW 57
+R RR QRRGPLV+Y D + L AFRNIPGVE SV LNLL+LAPGGH+GRF++W
Sbjct: 197 LRGRRHKQRRGPLVIYNPDEDGKELVLAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVW 256
Query: 58 TESAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
T SAF LD +YGS + LKK + LP M+
Sbjct: 257 TSSAFTALDKVYGSTTEPSALKKDFLLPSTIMS 289
>gi|326427311|gb|EGD72881.1| Ras2 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPLV Y K+ G+ +AFRN+PGVEL V L++LKLAPGGHVGRF+IWTE A
Sbjct: 197 RNRRHTMRRGPLVCYKKNNGIVRAFRNLPGVELCPVESLSVLKLAPGGHVGRFIIWTEGA 256
Query: 62 FKKLDALYGSWKTKA--PLKK-----GYSLPQPKMAN 91
F L+ L+G+ A LKK Y +P+ KM N
Sbjct: 257 FNHLNKLFGTGNKPADMSLKKRTNGAPYYMPRTKMTN 293
>gi|391325585|ref|XP_003737313.1| PREDICTED: 60S ribosomal protein L4-A-like [Metaseiulus
occidentalis]
Length = 410
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 63/82 (76%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD G+ +AFRNIPGV+ +V+ L++ KLAPGGH GRF+IWTE+AF+KL+ ++G
Sbjct: 209 GPLVVYEKDNGIVRAFRNIPGVDTCNVNSLSIFKLAPGGHAGRFIIWTEAAFRKLNDIFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
++ + +KK Y LP+ M T
Sbjct: 269 TFSKASKVKKAYKLPRAMMTIT 290
>gi|443923667|gb|ELU42840.1| Ras2 [Rhizoctonia solani AG-1 IA]
Length = 802
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPL+VY +D+G+ +AFRN+PGVE+ +V +LNLL+LAPGGH+GRFVIWTE AF LD ++G
Sbjct: 592 GPLIVYNEDKGIVRAFRNLPGVEVANVRRLNLLQLAPGGHLGRFVIWTEGAFNLLDEVFG 651
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
++ + KK Y LP K+ N
Sbjct: 652 TFDKASVYKKDYYLPTAKITN 672
>gi|219121527|ref|XP_002181116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407102|gb|EEC47039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 397
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR RRGPLV+Y + G+ +AFRN+PGVEL V +LNLL+LAPGGH+GRF IW+++
Sbjct: 219 MRNRRYTLRRGPLVIYKSNDGVEQAFRNLPGVELCCVDRLNLLQLAPGGHMGRFCIWSQA 278
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A ++LD +YG + G +PQ M N
Sbjct: 279 ALEELDIIYG--------ENGKRIPQAAMTNA 302
>gi|328866159|gb|EGG14545.1| 60S ribosomal protein L4 [Dictyostelium fasciculatum]
Length = 369
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR RRGPL+V +AFRNIPGV++ VS LN+L+LAPGGH+GRFVIW++
Sbjct: 194 LRNRRFQSRRGPLLVLAGPSKCVRAFRNIPGVDIAFVSSLNILRLAPGGHLGRFVIWSQD 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF++LD ++G+ KT KKG+ LP+P M N
Sbjct: 254 AFEQLDKIFGT-KTTPSAKKGFRLPRPVMLN 283
>gi|219113891|ref|XP_002176132.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402924|gb|EEC42883.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 8/92 (8%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR RRGPLV+Y + G+ +AFRN+PGVEL V +LNLL+LAPGGH+GRF IW+++
Sbjct: 194 MRNRRYTLRRGPLVIYKSNDGVEQAFRNLPGVELCCVDRLNLLQLAPGGHMGRFCIWSQA 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
A ++LD +YG + G +PQ M N
Sbjct: 254 ALEELDIIYG--------ENGKRIPQAAMTNA 277
>gi|22758862|gb|AAN05590.1| ribosomal protein L4 [Argopecten irradians]
Length = 269
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 11/82 (13%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLV+Y +D G+++AFRNIPG+ LI+VS+LNLLK+APGGHVGRF IWTESAF++LD LY
Sbjct: 128 GPLVIYREDNGISRAFRNIPGITLINVSRLNLLKIAPGGHVGRFCIWTESAFRQLDDLY- 186
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+ +P KM NT
Sbjct: 187 ----------KFKIPDQKMTNT 198
>gi|145490309|ref|XP_001431155.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145545624|ref|XP_001458496.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830156|emb|CAI39016.1| telomerase, putative [Paramecium tetraurelia]
gi|74830167|emb|CAI39018.1| ribosomal protein L4, putative [Paramecium tetraurelia]
gi|124398258|emb|CAK63757.1| unnamed protein product [Paramecium tetraurelia]
gi|124426316|emb|CAK91099.1| unnamed protein product [Paramecium tetraurelia]
Length = 406
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 9 RRGPLVVY-GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
R+GPLVVY ++ L KAFRN+PGVE+++V++LNLL+LAPGG +GRFVIWT+SAF LD
Sbjct: 205 RKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDK 264
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
L+G+++ + LK GY L +P + N
Sbjct: 265 LFGTYRYASVLKDGYQLLRPLLTN 288
>gi|224062820|ref|XP_002200110.1| PREDICTED: 60S ribosomal protein L4 [Taeniopygia guttata]
Length = 383
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ +AFRNIPG+ L++V+KLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIRAFRNIPGITLLNVNKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAATLKSDYNLPMHKMTNT 287
>gi|224000902|ref|XP_002290123.1| RL4e, ribosomal protein 4e 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220973545|gb|EED91875.1| RL4e, ribosomal protein 4e 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 378
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPLV+Y + G+ +AFRN+PGVEL V +LNLL+LAPGGH+GRF IW+++A
Sbjct: 195 RNRRYTLRRGPLVIYKSNDGVEQAFRNLPGVELCCVDRLNLLQLAPGGHMGRFCIWSQAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
L+ +YG K+G S+P+ MAN
Sbjct: 255 LDALNTIYG--------KEGKSIPEDLMANA 277
>gi|115437794|ref|XP_001217901.1| 60S ribosomal protein L4 [Aspergillus terreus NIH2624]
gi|114188716|gb|EAU30416.1| 60S ribosomal protein L4-2 [Aspergillus terreus NIH2624]
Length = 372
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFQALDQ 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YGS T A LKK Y+LPQ +AN
Sbjct: 268 VYGSTTTPAALKKDYTLPQNVVAN 291
>gi|119498945|ref|XP_001266230.1| 60S ribosomal protein L4 [Neosartorya fischeri NRRL 181]
gi|119414394|gb|EAW24333.1| 60S ribosomal protein L4, putative [Neosartorya fischeri NRRL 181]
Length = 373
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++WT +AF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWTSAAFEALDQ 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YGS T A LKK Y LPQ +AN
Sbjct: 268 VYGSTTTPAALKKDYVLPQNLVAN 291
>gi|70985070|ref|XP_748041.1| 60S ribosomal protein L4 [Aspergillus fumigatus Af293]
gi|66845669|gb|EAL86003.1| 60S ribosomal protein L4, putative [Aspergillus fumigatus Af293]
gi|159126035|gb|EDP51151.1| 60S ribosomal protein L4, putative [Aspergillus fumigatus A1163]
Length = 373
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++WT +AF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWTSAAFEALDQ 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YGS T A LKK Y LPQ +AN
Sbjct: 268 VYGSTTTPAALKKDYVLPQNLVAN 291
>gi|449297827|gb|EMC93844.1| hypothetical protein BAUCODRAFT_567424 [Baudoinia compniacensis
UAMH 10762]
Length = 371
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
Query: 1 MRNRRRIQRRGPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFV 55
+R RR QRRGPL+VY GKD L AFRNIPGVE +V LNLL+LAPGGH+GRFV
Sbjct: 197 LRGRRHKQRRGPLIVYDPEKDGKD--LVLAFRNIPGVETCTVYALNLLQLAPGGHLGRFV 254
Query: 56 IWTESAFKKLDALYGSWKTKAPLKKGYSLP 85
+WT SAF LD +YGS + +K+ + LP
Sbjct: 255 VWTSSAFAALDTIYGSQTEPSEMKRDFLLP 284
>gi|281500834|pdb|3JYW|D Chain D, Structure Of The 60s Proteins For Eukaryotic Ribosome
Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
At 8.9a Resolution
Length = 257
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 191 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 250
Query: 62 FKKLD 66
F KLD
Sbjct: 251 FTKLD 255
>gi|209881791|ref|XP_002142333.1| 60S ribosomal protein L4 [Cryptosporidium muris RN66]
gi|209557939|gb|EEA07984.1| 60S ribosomal protein L4, putative [Cryptosporidium muris RN66]
Length = 389
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRRR+ RGPLV+Y D+G+T+A RNIPGVE +V LNLLKLAPGG GR I+T S
Sbjct: 197 MRNRRRVCARGPLVIYAVDKGITRAMRNIPGVETCNVESLNLLKLAPGGTFGRLTIFTVS 256
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
A KKL +YGS+ + + K GY+LP+ M+N
Sbjct: 257 AMKKLQEIYGSYASGSSSKVGYTLPRCPMSN 287
>gi|121718897|ref|XP_001276228.1| 60S ribosomal protein L4 [Aspergillus clavatus NRRL 1]
gi|119404426|gb|EAW14802.1| 60S ribosomal protein L4, putative [Aspergillus clavatus NRRL 1]
Length = 372
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFALNLLQLAPGGHLGRFIVWTSSAFEALDQ 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
+YGS A LKK Y LPQ +AN
Sbjct: 268 VYGSTTAPAALKKDYFLPQNLVANA 292
>gi|403349563|gb|EJY74220.1| 60S ribosomal protein L4 [Oxytricha trifallax]
gi|403353438|gb|EJY76254.1| 60S ribosomal protein L4 [Oxytricha trifallax]
Length = 408
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTK-AFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRN R + R+GPLVVYG + L K RN+PGVE ++V +LNLL LAPGGH+GRF+IWT+
Sbjct: 194 MRNSRYVLRKGPLVVYGDENNLVKRTARNLPGVETVNVHRLNLLSLAPGGHLGRFIIWTK 253
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
AFK L+ ++G+++ K K GY L + M
Sbjct: 254 DAFKALNNIFGNYRAKGIEKSGYVLNRNVM 283
>gi|67478655|ref|XP_654711.1| 60S ribosomal protein L4 [Entamoeba histolytica HM-1:IMSS]
gi|56471776|gb|EAL49320.1| 60S ribosomal protein L4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 431
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFKKL+ ++G+ K A K G+ + +MA
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQMA 287
>gi|67474022|ref|XP_652760.1| 60S ribosomal protein L4 [Entamoeba histolytica HM-1:IMSS]
gi|56469645|gb|EAL47374.1| 60S ribosomal protein L4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 431
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFKKL+ ++G+ K A K G+ + +MA
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQMA 287
>gi|326504742|dbj|BAK06662.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY D G+ KA RNIPGVE VS LNLL+LAPGGHVGRFVIWTE AF LD +Y
Sbjct: 204 GPLVVYKNDEGIVKALRNIPGVETCPVSALNLLQLAPGGHVGRFVIWTEGAFGALDEVYA 263
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+ K GY LP K++++
Sbjct: 264 A-------KSGYELPTAKISSS 278
>gi|340370059|ref|XP_003383564.1| PREDICTED: 60S ribosomal protein L4-like [Amphimedon queenslandica]
Length = 357
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 78/92 (84%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +Q++GPLV+Y KD G+ KAFRN+PGVEL++V+KLNLL+LAPGGH+GRF IWT+S
Sbjct: 194 MRNRRYLQKKGPLVIYSKDSGIKKAFRNLPGVELLNVNKLNLLRLAPGGHMGRFCIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF+KLD +YG++ K+ +KK Y LP+ M N+
Sbjct: 254 AFEKLDRIYGTFNKKSKVKKNYKLPRHTMTNS 285
>gi|183231989|ref|XP_001913650.1| 60S ribosomal protein L4 [Entamoeba histolytica HM-1:IMSS]
gi|169802255|gb|EDS89578.1| 60S ribosomal protein L4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 431
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFKKL+ ++G+ K A K G+ + +MA
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQMA 287
>gi|167395471|ref|XP_001741540.1| 60S ribosomal protein L4 [Entamoeba dispar SAW760]
gi|167396309|ref|XP_001742003.1| 60S ribosomal protein L4 [Entamoeba dispar SAW760]
gi|167539804|ref|XP_001741360.1| 60S ribosomal protein L4 [Entamoeba dispar SAW760]
gi|165893200|gb|EDR21540.1| 60S ribosomal protein L4, putative [Entamoeba dispar SAW760]
gi|165893876|gb|EDR21994.1| 60S ribosomal protein L4, putative [Entamoeba dispar SAW760]
gi|165894061|gb|EDR22145.1| 60S ribosomal protein L4, putative [Entamoeba dispar SAW760]
Length = 431
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFKKL+ ++G+ K A K G+ + +MA
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQMA 287
>gi|167392486|ref|XP_001740178.1| 60S ribosomal protein L4 [Entamoeba dispar SAW760]
gi|165895856|gb|EDR23445.1| 60S ribosomal protein L4, putative [Entamoeba dispar SAW760]
Length = 431
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFKKL+ ++G+ K A K G+ + +MA
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQMA 287
>gi|300120651|emb|CBK20205.2| unnamed protein product [Blastocystis hominis]
gi|300122378|emb|CBK22949.2| unnamed protein product [Blastocystis hominis]
gi|300123878|emb|CBK25149.2| Ribosomal protein L4/L1e [Blastocystis hominis]
Length = 376
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR R GP+VVY + + FRNIPGVEL +V+++N+L++APGGHVGRFVIWT+
Sbjct: 199 MRNRRYTMRVGPMVVYADGEEAVALPFRNIPGVELCNVNRMNVLRMAPGGHVGRFVIWTK 258
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQ 86
+AF++L+ALYG K GY++P+
Sbjct: 259 AAFERLEALYGPESEKV----GYTMPK 281
>gi|358371682|dbj|GAA88289.1| 60S ribosomal protein L4-2 [Aspergillus kawachii IFO 4308]
Length = 372
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF+ L
Sbjct: 208 GPLVVYNPEVDGKD--LVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFEAL 265
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMAN 91
D +YG+ T + LKK Y LPQ +AN
Sbjct: 266 DKVYGTTTTASALKKDYLLPQNVVAN 291
>gi|226294222|gb|EEH49642.1| 60S ribosomal protein L4-A [Paracoccidioides brasiliensis Pb18]
Length = 372
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF LDA+
Sbjct: 209 PLVVYNPDVDGKDLVKAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWTSSAFAALDAI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YGS T + LKK + LP ++N
Sbjct: 269 YGSTTTPSALKKDFLLPSNLVSN 291
>gi|397641595|gb|EJK74741.1| hypothetical protein THAOC_03561 [Thalassiosira oceanica]
Length = 382
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR RRGPLVVY + G+ +AFRN+PGVEL V +LNLL+LAPGGH+GRF IW+++A
Sbjct: 195 RNRRYTLRRGPLVVYKSNDGVEQAFRNLPGVELCCVDRLNLLQLAPGGHMGRFCIWSQAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
L+ +YG+ G +P+ MAN
Sbjct: 255 LDALNDIYGA--------DGKRIPEDIMANA 277
>gi|405122689|gb|AFR97455.1| Ras2 [Cryptococcus neoformans var. grubii H99]
Length = 363
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD G+ +AF+N+PGVE V LNLL+LAPGGHVGRFVIWTESA LD++Y
Sbjct: 204 GPLVVYAKDEGIVRAFKNVPGVETCPVESLNLLQLAPGGHVGRFVIWTESAIAALDSVYE 263
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
K G++LP K++ +
Sbjct: 264 K-------KSGFNLPTAKISTS 278
>gi|440292426|gb|ELP85631.1| 60S ribosomal protein L4, putative [Entamoeba invadens IP1]
Length = 432
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R R+GPLVVY D +AFRNIPGV+ +V L++L LAPGGH+GRF+IWTE
Sbjct: 197 MRGRLHKVRKGPLVVYHNDEAQAIRAFRNIPGVDSCNVDNLSVLNLAPGGHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFK+L+ ++G+ K A KKG+ +P+ + A
Sbjct: 257 SAFKRLNYIFGTQKAMAQGKKGFRVPKAQAA 287
>gi|440300553|gb|ELP93000.1| 60S ribosomal protein L4, putative [Entamoeba invadens IP1]
Length = 432
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R R+GPLVVY D +AFRNIPGV+ +V L++L LAPGGH+GRF+IWTE
Sbjct: 197 MRGRLHKVRKGPLVVYHNDEAQAIRAFRNIPGVDSCNVDNLSVLNLAPGGHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
SAFK+L+ ++G+ K A KKG+ +P+ + A
Sbjct: 257 SAFKRLNYIFGTQKAMAQGKKGFRVPKAQAA 287
>gi|67481533|ref|XP_656116.1| 60S ribosomal protein L4 [Entamoeba histolytica HM-1:IMSS]
gi|56473296|gb|EAL50730.1| 60S ribosomal protein L4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 431
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IWTE
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTE 256
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKM 89
SAFKKL+ ++G+ K A K G+ + +M
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRIAHAQM 286
>gi|317032010|ref|XP_001393829.2| 60S ribosomal protein L4 [Aspergillus niger CBS 513.88]
Length = 390
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF+ LD
Sbjct: 226 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFEALDK 285
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YG+ T + LKK Y LPQ +AN
Sbjct: 286 VYGTTTTASALKKDYLLPQNVVAN 309
>gi|134078379|emb|CAK40370.1| unnamed protein product [Aspergillus niger]
gi|350640130|gb|EHA28483.1| hypothetical protein ASPNIDRAFT_212494 [Aspergillus niger ATCC
1015]
Length = 372
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFEALDK 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YG+ T + LKK Y LPQ +AN
Sbjct: 268 VYGTTTTASALKKDYLLPQNVVAN 291
>gi|326511094|dbj|BAJ91894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY D G+ KA RNIPGVE V+ LNLL+LAPGGHVGRFVIWTE AF LD +Y
Sbjct: 204 GPLVVYKNDEGIVKALRNIPGVETCPVTALNLLQLAPGGHVGRFVIWTEGAFGALDEVYA 263
Query: 71 SWKTKAPLKKGYSLPQPKMA 90
+ K GY LP K++
Sbjct: 264 A-------KSGYELPTAKIS 276
>gi|317148273|ref|XP_001822664.2| 60S ribosomal protein L4 [Aspergillus oryzae RIB40]
Length = 407
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE V LNLL+LAPGGH+GRFV+WT SAF+ LD
Sbjct: 243 GPLVVYNPEVDGKELVRAFRNIPGVETSPVFALNLLQLAPGGHLGRFVVWTSSAFEALDQ 302
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
++GS + A LKK Y LPQ +AN
Sbjct: 303 VFGSGSSPAALKKDYLLPQNVVANA 327
>gi|222064025|emb|CAQ86675.1| putative ribosomal protein conserved domain L4/L1 family
[Histomonas meleagridis]
Length = 275
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR +RGPLVVY KD G+ KAFRNIPGVE+ SV +L++ +LAP G +GR VIWTES
Sbjct: 49 MRRSSTKTKRGPLVVYNKDEGVVKAFRNIPGVEIQSVHRLSIYQLAPAGKMGRLVIWTES 108
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFK LD +Y + KKG+++P + N
Sbjct: 109 AFKALDEIYEN-------KKGFTIPHSIVTNA 133
>gi|238503079|ref|XP_002382773.1| 60S ribosomal protein L4 [Aspergillus flavus NRRL3357]
gi|83771399|dbj|BAE61531.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691583|gb|EED47931.1| 60S ribosomal protein L4, putative [Aspergillus flavus NRRL3357]
gi|391870666|gb|EIT79843.1| ribosomal protein RPL1/RPL2/RL4L4 [Aspergillus oryzae 3.042]
Length = 372
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPGVE V LNLL+LAPGGH+GRFV+WT SAF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGVETSPVFALNLLQLAPGGHLGRFVVWTSSAFEALDQ 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
++GS + A LKK Y LPQ +AN
Sbjct: 268 VFGSGSSPAALKKDYLLPQNVVANA 292
>gi|58259908|ref|XP_567364.1| Ras2 [Cryptococcus neoformans var. neoformans JEC21]
gi|134116412|ref|XP_773160.1| 60S ribosomal protein L4 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|50255781|gb|EAL18513.1| hypothetical protein CNBJ1550 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229414|gb|AAW45847.1| Ras2, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 363
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD G+ +AF+N+PGVE V LNLL+LAPGGHVGRF+IWTESA LD++Y
Sbjct: 204 GPLVVYAKDEGIVRAFKNVPGVETCPVESLNLLQLAPGGHVGRFIIWTESAIAALDSVYE 263
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
K G++LP K++ +
Sbjct: 264 K-------KSGFNLPTAKISTS 278
>gi|78145815|gb|ABB22762.1| ribosomal protein L4, partial [Chanos chanos]
Length = 173
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRRRIQR+GP ++Y +D G+++AFRNIPG+ L +VSKL+LLKLAPGGHVGRF IWTE
Sbjct: 110 MRNRRRIQRKGPCIIYNEDNGVSRAFRNIPGITLQNVSKLDLLKLAPGGHVGRFCIWTE 168
>gi|170095954|ref|XP_001879197.1| 60S ribosomal protein L4 [Laccaria bicolor S238N-H82]
gi|164645565|gb|EDR09812.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 364
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY +D G+ KAFRN+PGVEL++V +LNLL+LAPGGH+GRFVIWTE AF LD +
Sbjct: 204 GPLVVYNEDNGIVKAFRNLPGVELVNVRRLNLLQLAPGGHLGRFVIWTEGAFALLDEV-- 261
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
+ KK Y LP K++N
Sbjct: 262 -----SVHKKDYYLPTAKISN 277
>gi|321262877|ref|XP_003196157.1| 60s ribosomal protein L4-B [Cryptococcus gattii WM276]
gi|317462632|gb|ADV24370.1| 60s ribosomal protein L4-B, putative [Cryptococcus gattii WM276]
Length = 363
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 7/81 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD G+ +AF+N+PGVE V LNLL+LAPGGHVGRF+IWTESA LD++Y
Sbjct: 204 GPLVVYAKDEGIVRAFKNVPGVETCPVESLNLLQLAPGGHVGRFIIWTESAIAALDSVYE 263
Query: 71 SWKTKAPLKKGYSLPQPKMAN 91
K G++LP K++
Sbjct: 264 K-------KSGFNLPTAKIST 277
>gi|295657284|ref|XP_002789212.1| 60S ribosomal protein L4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284459|gb|EEH40025.1| 60S ribosomal protein L4-A [Paracoccidioides sp. 'lutzii' Pb01]
Length = 372
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKDLVKAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YGS T + LKK + LP ++N
Sbjct: 269 YGSTTTPSALKKDFLLPSNLVSN 291
>gi|225684915|gb|EEH23199.1| 60S ribosomal protein L4-A [Paracoccidioides brasiliensis Pb03]
Length = 372
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKDLVKAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YGS T + LKK + LP ++N
Sbjct: 269 YGSTTTPSALKKDFLLPSNLVSN 291
>gi|392577995|gb|EIW71123.1| hypothetical protein TREMEDRAFT_42593 [Tremella mesenterica DSM
1558]
Length = 363
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 7/79 (8%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD G+ +A +N+PGVE V LNLL+LAPGGHVGRFVIWTESA LDA+Y
Sbjct: 204 GPLVVYAKDEGIVRALKNVPGVETCPVDALNLLQLAPGGHVGRFVIWTESAIAALDAVYE 263
Query: 71 SWKTKAPLKKGYSLPQPKM 89
+ K G+SLP K+
Sbjct: 264 N-------KSGFSLPLSKI 275
>gi|425772526|gb|EKV10927.1| 60S ribosomal protein L4, putative [Penicillium digitatum PHI26]
gi|425774958|gb|EKV13249.1| 60S ribosomal protein L4, putative [Penicillium digitatum Pd1]
Length = 370
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 7/86 (8%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L KAFRNIPGVE V LNLL+LAPGGH+GRFVIWT SAF+ L
Sbjct: 206 GPLVVYNPETDGKD--LVKAFRNIPGVETSPVFSLNLLQLAPGGHLGRFVIWTSSAFQAL 263
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMAN 91
D +YG+ + + LK+ Y LP +AN
Sbjct: 264 DQVYGTTTSPSALKRDYLLPSNLVAN 289
>gi|242791918|ref|XP_002481852.1| 60S ribosomal protein L4 [Talaromyces stipitatus ATCC 10500]
gi|218718440|gb|EED17860.1| 60S ribosomal protein L4, putative [Talaromyces stipitatus ATCC
10500]
Length = 372
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPETDGKELVKAFRNIPGVETSSVYALNLLQLAPGGHLGRFIVWTSSAFAALDEV 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ T + LKK + LP +AN
Sbjct: 269 YGTTTTASALKKDFLLPSNVLAN 291
>gi|255955813|ref|XP_002568659.1| Pc21g16520 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590370|emb|CAP96549.1| Pc21g16520 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 370
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 61/86 (70%), Gaps = 7/86 (8%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L KAFRNIPGVE V LNLL+LAPGGH+GRFVIWT +AF+ L
Sbjct: 206 GPLVVYNPETDGKD--LVKAFRNIPGVETSPVFSLNLLQLAPGGHLGRFVIWTSTAFQAL 263
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMAN 91
D +YG+ T + LK+ Y LP ++N
Sbjct: 264 DQVYGTTTTPSALKRDYLLPSNVVSN 289
>gi|378728788|gb|EHY55247.1| 60S ribosomal protein L4-B [Exophiala dermatitidis NIH/UT8656]
Length = 373
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L +AFRNIPGVE SV LNLL+LAPGGH+GRF+IWT SAF L
Sbjct: 208 GPLVVYNPETDGKD--LVRAFRNIPGVETSSVFALNLLQLAPGGHLGRFIIWTSSAFAAL 265
Query: 66 DALYGSWKTKAPLKKGYSLPQPKMAN 91
D +YGS + LKK + LP ++N
Sbjct: 266 DTIYGSTTEASGLKKDFLLPSNLVSN 291
>gi|258571201|ref|XP_002544404.1| 60S ribosomal protein L4-A [Uncinocarpus reesii 1704]
gi|237904674|gb|EEP79075.1| 60S ribosomal protein L4-A [Uncinocarpus reesii 1704]
Length = 372
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF LD L
Sbjct: 209 PLVVYNPEVDGKELVKAFRNIPGVETCSVFALNLLQLAPGGHLGRFIVWTSSAFSALDQL 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ + LKK Y LP ++N
Sbjct: 269 YGTTTAPSALKKDYLLPSNIVSN 291
>gi|345570209|gb|EGX53034.1| hypothetical protein AOL_s00007g370 [Arthrobotrys oligospora ATCC
24927]
Length = 369
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYG---KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + L+KAFRNIPGVE V+ LNLL+LAPGGH+GRFVIW+ AFK LD +
Sbjct: 206 PLVIYDPATDGKVLSKAFRNIPGVETCPVTALNLLQLAPGGHLGRFVIWSSDAFKALDTI 265
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ + + KK YSLP ++ N
Sbjct: 266 YGTSTSPSGTKKDYSLPSAQVTN 288
>gi|327353288|gb|EGE82145.1| 60S ribosomal protein L4-A [Ajellomyces dermatitidis ATCC 18188]
Length = 482
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 319 PLVVYNPDVDGKELVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 378
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YGS + LKK + LP +AN
Sbjct: 379 YGSTTAPSALKKDFLLPSNLVAN 401
>gi|119183063|ref|XP_001242607.1| 60S ribosomal protein L4 [Coccidioides immitis RS]
gi|303319587|ref|XP_003069793.1| 60S ribosomal protein L4 [Coccidioides posadasii C735 delta SOWgp]
gi|240109479|gb|EER27648.1| 60S ribosomal protein L4-A, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040732|gb|EFW22665.1| 60S ribosomal protein L4-A [Coccidioides posadasii str. Silveira]
gi|392865511|gb|EAS31306.2| 60S ribosomal protein L4-A [Coccidioides immitis RS]
Length = 372
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRN+PGVE SV LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPEVDGKELVKAFRNVPGVETSSVFNLNLLQLAPGGHLGRFIVWTSSAFAALDQI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ T + LKK Y LP ++N
Sbjct: 269 YGTTTTPSALKKDYLLPSNIISN 291
>gi|239612338|gb|EEQ89325.1| 60S ribosomal protein L4 [Ajellomyces dermatitidis ER-3]
Length = 372
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDIDGKELVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YGS + LKK + LP +AN
Sbjct: 269 YGSTTAPSALKKDFLLPSNLVANA 292
>gi|261202602|ref|XP_002628515.1| 60S ribosomal protein L4 [Ajellomyces dermatitidis SLH14081]
gi|239590612|gb|EEQ73193.1| 60S ribosomal protein L4 [Ajellomyces dermatitidis SLH14081]
Length = 372
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKELVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YGS + LKK + LP +AN
Sbjct: 269 YGSTTAPSALKKDFLLPSNLVANA 292
>gi|212535050|ref|XP_002147681.1| 60S ribosomal protein L4 [Talaromyces marneffei ATCC 18224]
gi|210070080|gb|EEA24170.1| 60S ribosomal protein L4, putative [Talaromyces marneffei ATCC
18224]
Length = 372
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRNIPGVE SV LNLL+LAPGGH+GRF++WT +AF LD +
Sbjct: 209 PLVVYNPETDGKELVKAFRNIPGVETSSVYALNLLQLAPGGHLGRFIVWTSAAFAALDEV 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ T + LKK + LP +AN
Sbjct: 269 YGTTSTASALKKDFLLPSNLLAN 291
>gi|395822817|ref|XP_003784705.1| PREDICTED: 60S ribosomal protein L4 [Otolemur garnettii]
Length = 390
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 31 GVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMA 90
G+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG+W+ A LK Y+LP KM
Sbjct: 194 GITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMM 253
Query: 91 NT 92
NT
Sbjct: 254 NT 255
>gi|67902378|ref|XP_681445.1| hypothetical protein AN8176.2 [Aspergillus nidulans FGSC A4]
gi|40740008|gb|EAA59198.1| hypothetical protein AN8176.2 [Aspergillus nidulans FGSC A4]
gi|259480947|tpe|CBF74039.1| TPA: 60S ribosomal protein L4, putative (AFU_orthologue;
AFUA_5G03020) [Aspergillus nidulans FGSC A4]
Length = 372
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L +AFRNIPG+E V LNLL+LAPGGH+GRF++WT SAF+ LD
Sbjct: 208 GPLVVYNPEVDGKELVRAFRNIPGIETSPVFSLNLLQLAPGGHLGRFIVWTSSAFEALDT 267
Query: 68 LYGSWKTKAPLKKGYSLPQPKMANT 92
+YG+ + + LKK Y LP +AN
Sbjct: 268 VYGTTSSPSALKKDYLLPSNLVANA 292
>gi|396081884|gb|AFN83498.1| 60S ribosomal protein L4 [Encephalitozoon romaleae SJ-2008]
Length = 335
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR QR+G L+V+G+ L AFRNI GV+ +S+ L+LL+LAPGG GR +IWTES
Sbjct: 193 MRNRRYTQRKGILIVHGESSELL-AFRNIRGVDQMSIDSLDLLELAPGGMAGRLIIWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLP 85
AF+KLD ++G + +A L G+ LP
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLP 276
>gi|403295648|ref|XP_003938747.1| PREDICTED: 60S ribosomal protein L4-like [Saimiri boliviensis
boliviensis]
Length = 165
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRN RIQ RGP ++ +D G+ KAFRNIPG+ L++VSKLN+LKLAPGG VGRF IWT+S
Sbjct: 102 MRNCHRIQSRGPCIISNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGQVGRFCIWTKS 161
Query: 61 AFKK 64
AF K
Sbjct: 162 AFWK 165
>gi|154285254|ref|XP_001543422.1| 60S ribosomal protein L4 [Ajellomyces capsulatus NAm1]
gi|150407063|gb|EDN02604.1| 60S ribosomal protein L4-A [Ajellomyces capsulatus NAm1]
Length = 372
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKQLVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YGS + LKK + LP ++N
Sbjct: 269 YGSTTVPSALKKDFLLPSNLISNA 292
>gi|325093673|gb|EGC46983.1| 60S ribosomal protein [Ajellomyces capsulatus H88]
Length = 372
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKQLVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YGS + LKK + LP ++N
Sbjct: 269 YGSTTVPSALKKDFLLPSNLISNA 292
>gi|225557039|gb|EEH05326.1| 60S ribosomal protein [Ajellomyces capsulatus G186AR]
Length = 372
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L KAFRNIPGVE V LNLL+LAPGGH+GRF++WT SAF LD +
Sbjct: 209 PLVVYNPDVDGKQLVKAFRNIPGVETCPVFALNLLQLAPGGHLGRFIVWTSSAFAALDTI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YGS + LKK + LP ++N
Sbjct: 269 YGSTTVPSALKKDFLLPSNLISNA 292
>gi|429963310|gb|ELA42854.1| hypothetical protein VICG_00169 [Vittaforma corneae ATCC 50505]
Length = 331
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
RNRR I+R+G L+++ D AFR I GV+ + V+ L+LL+L+PGG +GR V+WTES
Sbjct: 193 FRNRRFIRRKGLLIIH--DGSQLSAFRGIVGVDQMDVNSLDLLELSPGGKMGRLVMWTES 250
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQP 87
AF KL +L+G++ T++ +KKGYSLP P
Sbjct: 251 AFNKLSSLFGTFATESEIKKGYSLPLP 277
>gi|340500272|gb|EGR27166.1| hypothetical protein IMG5_201070 [Ichthyophthirius multifiliis]
Length = 451
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 58/69 (84%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGY 82
T+A RNIPGV++ +V++LNLL+LAPGGHVGRFVIWT+SAF KL+ L+G++ + +K+GY
Sbjct: 223 TRALRNIPGVDVCNVNRLNLLQLAPGGHVGRFVIWTKSAFVKLNQLFGTYSYTSQVKQGY 282
Query: 83 SLPQPKMAN 91
L +P +AN
Sbjct: 283 QLQRPVLAN 291
>gi|407924177|gb|EKG17232.1| Ribosomal protein L4/L1e [Macrophomina phaseolina MS6]
Length = 372
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L AFRNIPGVE SV LNLL+LAPGGH+GRF++WT SAF+ LD +
Sbjct: 209 PLVVYDPESDGKELVTAFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVWTSSAFQALDKI 268
Query: 69 YGSWKTKAPLKKGYSLPQP 87
YGS + LKK + LP P
Sbjct: 269 YGSTTEPSALKKDFLLPAP 287
>gi|401827340|ref|XP_003887762.1| 60S ribosomal protein L4 [Encephalitozoon hellem ATCC 50504]
gi|392998769|gb|AFM98781.1| 60S ribosomal protein L4 [Encephalitozoon hellem ATCC 50504]
Length = 335
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR QR+G L+V+G+ L AFRNI GV+ +S+ L+LL+LAPGG GR +IWTES
Sbjct: 193 MRNRRYTQRKGILIVHGESSELL-AFRNIRGVDQMSIDNLDLLELAPGGMPGRLIIWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLP 85
AF+KLD ++G + +A L G+ LP
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLP 276
>gi|340522296|gb|EGR52529.1| hypothetical protein TRIREDRAFT_44434 [Trichoderma reesei QM6a]
Length = 352
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 11 GPLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPLVVY + + L K FRNIPGVE VS LNLL+LAPGGH+GRFVIWT +AFK LD
Sbjct: 208 GPLVVYNPEVDGKELVKGFRNIPGVETSPVSALNLLQLAPGGHLGRFVIWTSAAFKALDE 267
Query: 68 LYGSWKTKAPLKKGYSLP 85
+YGS + KK + LP
Sbjct: 268 IYGSTTVPSAHKKDFLLP 285
>gi|429861909|gb|ELA36572.1| 60s ribosomal protein l4-a [Colletotrichum gloeosporioides Nara
gc5]
Length = 351
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRNIPGVE V+ LNLL+LAPGGH+GRFV+WT +AFK LD +
Sbjct: 209 PLVIYDPEVDGKELVTAFRNIPGVESSPVTALNLLQLAPGGHLGRFVVWTSAAFKALDTI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS T + LKK + LP
Sbjct: 269 YGSTTTPSALKKDFLLP 285
>gi|449018769|dbj|BAM82171.1| 60S ribosomal protein L4 [Cyanidioschyzon merolae strain 10D]
Length = 382
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 15/101 (14%)
Query: 1 MRNRRRIQRRGPLVVY---------GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHV 51
MRNRR RRGPL++Y G L++AFRN+PGVE V +LNLL+LAPGGH+
Sbjct: 198 MRNRRYTMRRGPLIIYANSEKDPKSGAPDNLSRAFRNLPGVECCHVERLNLLQLAPGGHL 257
Query: 52 GRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
GRF I+T+ AF++LD +Y + K+ G+ P+ M
Sbjct: 258 GRFCIFTKQAFERLDEIYATGKS------GFKFPRAVMTQA 292
>gi|302656450|ref|XP_003019978.1| hypothetical protein TRV_05947 [Trichophyton verrucosum HKI 0517]
gi|291183756|gb|EFE39354.1| hypothetical protein TRV_05947 [Trichophyton verrucosum HKI 0517]
Length = 314
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF LD +
Sbjct: 150 PLVIYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFSALDEI 209
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YG+ T + LKK + LP ++N+
Sbjct: 210 YGTTTTASALKKDFLLPSNIVSNS 233
>gi|358389722|gb|EHK27314.1| hypothetical protein TRIVIDRAFT_73228 [Trichoderma virens Gv29-8]
Length = 352
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L K FRNIPGVE VS LNLL+LAPGGH+GRFVIWT +AFK LD +
Sbjct: 209 PLVVYNPEVDGKELVKGFRNIPGVETSPVSALNLLQLAPGGHLGRFVIWTSAAFKALDEI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YG+ T + KK + LP
Sbjct: 269 YGTTTTASTHKKDFLLP 285
>gi|300708062|ref|XP_002996219.1| hypothetical protein NCER_100725 [Nosema ceranae BRL01]
gi|239605500|gb|EEQ82548.1| hypothetical protein NCER_100725 [Nosema ceranae BRL01]
Length = 334
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR R+G L+++ L KAFRNIPGV+ ++++KLN+ +LAPGGH GR ++WTES
Sbjct: 193 MRNRRYRMRKGLLLIHDSPVEL-KAFRNIPGVDQLNINKLNIYELAPGGHAGRLILWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
+FKKL++++G + +++ L K ++LP+
Sbjct: 252 SFKKLESMFGKFNSESKLLKKFTLPK 277
>gi|327301521|ref|XP_003235453.1| 60S ribosomal protein L4 [Trichophyton rubrum CBS 118892]
gi|326462805|gb|EGD88258.1| 60S ribosomal protein [Trichophyton rubrum CBS 118892]
Length = 373
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF LD +
Sbjct: 209 PLVIYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFSALDEI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YG+ T + LKK + LP ++N+
Sbjct: 269 YGTTTTASALKKDFLLPSNIVSNS 292
>gi|326468935|gb|EGD92944.1| 60S ribosomal protein L4-A [Trichophyton tonsurans CBS 112818]
gi|326480086|gb|EGE04096.1| 60S ribosomal protein L4-A [Trichophyton equinum CBS 127.97]
Length = 373
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF LD +
Sbjct: 209 PLVIYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFSALDEI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YG+ T + LKK + LP ++N+
Sbjct: 269 YGTTTTASALKKDFLLPSNIVSNS 292
>gi|322703514|gb|EFY95122.1| 60S ribosomal protein L4, putative [Metarhizium anisopliae ARSEF
23]
Length = 351
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRNIPGVE VS LNLL+LAPGGH+GRF++WT SAFK LD +
Sbjct: 209 PLVVYNPEVDGKELVKAFRNIPGVETSPVSALNLLQLAPGGHLGRFIVWTSSAFKALDDI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 269 YGSTTEASAHKRDFFLP 285
>gi|19173410|ref|NP_597213.1| 60S RIBOSOMAL PROTEIN L4 [Encephalitozoon cuniculi GB-M1]
gi|19170999|emb|CAD26389.1| 60S RIBOSOMAL PROTEIN L4 [Encephalitozoon cuniculi GB-M1]
gi|449328800|gb|AGE95076.1| 60S ribosomal protein l4 [Encephalitozoon cuniculi]
Length = 335
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR QR+G L+V+G+ + FRNI GV+ +S+ L+LL+LAPGG GR +IWTES
Sbjct: 193 MRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLP 85
AF+KLD ++G + +A L G+ LP
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLP 276
>gi|322693709|gb|EFY85560.1| 60S ribosomal protein L4, putative [Metarhizium acridum CQMa 102]
Length = 376
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L KAFRNIPGVE VS LNLL+LAPGGH+GRF++WT SAFK LD +
Sbjct: 234 PLVVYNPEVDGKELVKAFRNIPGVETSPVSALNLLQLAPGGHLGRFIVWTSSAFKALDDI 293
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 294 YGSTTEASAHKRDFFLP 310
>gi|302506348|ref|XP_003015131.1| hypothetical protein ARB_06891 [Arthroderma benhamiae CBS 112371]
gi|291178702|gb|EFE34491.1| hypothetical protein ARB_06891 [Arthroderma benhamiae CBS 112371]
Length = 384
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF LD +
Sbjct: 220 PLVIYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFSALDEI 279
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
YG+ T + LKK + LP ++N+
Sbjct: 280 YGTTTTASALKKDFLLPSNIVSNS 303
>gi|303390282|ref|XP_003073372.1| 60S ribosomal protein L4 [Encephalitozoon intestinalis ATCC 50506]
gi|303302518|gb|ADM12012.1| 60S ribosomal protein L4 [Encephalitozoon intestinalis ATCC 50506]
Length = 335
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR QR+G L+V+G+ L FRNI GV+ +S+ L+LL+LAPGG GR +IWTES
Sbjct: 193 MRNRRYTQRKGILIVHGESSELL-GFRNIRGVDQMSIDSLDLLELAPGGLPGRLIIWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
AF+KLD ++G + +A L G+ LP +A+
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLPDRIVAH 282
>gi|310771950|emb|CBH28912.1| 60S RIBOSOMAL PROTEIN L4 [Anncaliia algerae]
Length = 326
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR ++G L+VY + + KAFRNI GV+LI V +LN++ L PGG GR ++W E A
Sbjct: 194 RNRRYKMKKGILIVYKEKTSMVKAFRNIEGVDLIGVDRLNIIDLCPGGQAGRLILWVEDA 253
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F+ L +YG + +A KKGY LP
Sbjct: 254 FEALSDIYGKFYEEAKGKKGYCLP 277
>gi|326578097|gb|ADZ95692.1| 60S ribosomal protein L4 [Nosema bombycis]
Length = 334
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR +R+G L+V+ D L +AF NI GV+ ++V K+++ +LAPGGH GR ++WTES
Sbjct: 193 MRNRRFTKRKGVLIVHTNDSDL-RAFTNIQGVDQLNVDKMSIFELAPGGHSGRLILWTES 251
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
AFKKL ++G + + KG++LP+
Sbjct: 252 AFKKLSVIFGKINESSEVLKGFTLPK 277
>gi|315049263|ref|XP_003174006.1| 60S ribosomal protein L4 [Arthroderma gypseum CBS 118893]
gi|311341973|gb|EFR01176.1| 60S ribosomal protein L4-A [Arthroderma gypseum CBS 118893]
Length = 373
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L +AFRNIPGVE SV LNLL+LAPGGH+GRF++W+ +AF LD +
Sbjct: 209 PLVIYNPEVDGKELVRAFRNIPGVETSSVFSLNLLQLAPGGHLGRFIVWSSAAFSALDEI 268
Query: 69 YGSWKTKAPLKKGYSLPQPKMAN 91
YG+ T + LKK + LP ++N
Sbjct: 269 YGTTTTASALKKDFLLPSNIVSN 291
>gi|296413694|ref|XP_002836544.1| 60S ribosomal protein L4 [Tuber melanosporum Mel28]
gi|295630371|emb|CAZ80735.1| unnamed protein product [Tuber melanosporum]
Length = 413
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Query: 12 PLVVYG----KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
PLV+ + + K+FRNIPGVE SV+ LNLL+LAPGGH+GRFV+WTESAF L+
Sbjct: 245 PLVIINPTDENAQSVVKSFRNIPGVETASVTSLNLLQLAPGGHLGRFVVWTESAFNALNT 304
Query: 68 LYGSWKTKAPLKKGYSLPQPKMAN 91
+YG+ T + LKK Y LP ++N
Sbjct: 305 VYGTTVTPSELKKDYLLPTNIVSN 328
>gi|346322831|gb|EGX92429.1| 60S ribosomal protein L4 [Cordyceps militaris CM01]
Length = 352
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY D + L + FRNIPGVE V+ LNLL+LAPGGH+GRFV+WT SAF+ LD +
Sbjct: 209 PLVVYNSDTDGKDLVQGFRNIPGVETCPVNALNLLQLAPGGHLGRFVVWTSSAFQALDDI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 269 YGSTTEASSHKRDFLLP 285
>gi|253741651|gb|EES98516.1| Ribosomal protein L4 [Giardia intestinalis ATCC 50581]
Length = 316
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR I R+GPLV+Y + + + FRNIPGV+L VS + LL+LAPG H GR ++WT+S
Sbjct: 184 MRNRRYITRKGPLVIYNTE-DVARGFRNIPGVDLCHVSSIRLLELAPGSHPGRLILWTKS 242
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF LD +Y + K+ Y+LP+ + T +R++
Sbjct: 243 AFASLDDVYAA-------KQNYTLPRACITQTDIERIL 273
>gi|358401362|gb|EHK50668.1| hypothetical protein TRIATDRAFT_297039 [Trichoderma atroviride IMI
206040]
Length = 352
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L K FRNIPGVE VS LNLL+LAPGGH+GRF++WT +AFK LD +
Sbjct: 209 PLVVYNPEVDGKELVKGFRNIPGVETSPVSALNLLQLAPGGHLGRFIVWTSAAFKALDEI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS T + K+ + LP
Sbjct: 269 YGSTTTPSAHKRDFLLP 285
>gi|2350919|dbj|BAA21989.1| ribosomal protein L1 [Entamoeba histolytica]
Length = 137
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IW E
Sbjct: 42 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWPE 101
Query: 60 SAFKKLDALYGSWKTKAPLKKGY 82
SAFKKL+ +G+ K A G+
Sbjct: 102 SAFKKLNTTFGTQKEMAQGPSGF 124
>gi|402085631|gb|EJT80529.1| 60S ribosomal protein L4-A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 371
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 12 PLVVYG---KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y L K FRNIPGVE SV LNLL+LAPGGH+GRF++WT +AFK LD +
Sbjct: 209 PLVIYDPATDGTELVKGFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVWTSAAFKALDNI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS T + LKK + LP
Sbjct: 269 YGSTTTPSKLKKDFLLP 285
>gi|406860302|gb|EKD13361.1| 60S ribosomal protein L4 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 373
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L+ AFRNI GVE SV LNLL+LAPGGH+GRF+IWT +AFK LD +
Sbjct: 209 PLVIYDPEVDGKELSLAFRNISGVETSSVFALNLLQLAPGGHLGRFIIWTSAAFKALDNI 268
Query: 69 YGSWKTKAPLKKGYSLPQP 87
YGS + LKK + LP P
Sbjct: 269 YGSMTIPSDLKKDFLLPSP 287
>gi|3914703|sp|O15594.2|RL4_ENTHI RecName: Full=60S ribosomal protein L4; AltName: Full=L1
Length = 245
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IW E
Sbjct: 150 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWPE 209
Query: 60 SAFKKLDALYGSWKTKAPLKKGY 82
SAFKKL+ +G+ K A G+
Sbjct: 210 SAFKKLNTTFGTQKEMAQGPSGF 232
>gi|310794400|gb|EFQ29861.1| ribosomal protein L4/L1 family protein [Glomerella graminicola
M1.001]
Length = 387
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRN+PGVE V+ LNLL+LAPGGH+GRFV+WT +AFK LD +
Sbjct: 245 PLVIYDPEVDGKELVTAFRNVPGVETSPVTSLNLLQLAPGGHLGRFVVWTSAAFKSLDTI 304
Query: 69 YGSWKTKAPLKKGYSLP 85
YG+ + LKK + LP
Sbjct: 305 YGTTTQPSALKKDFLLP 321
>gi|400598679|gb|EJP66388.1| 60S ribosomal protein L4 [Beauveria bassiana ARSEF 2860]
Length = 352
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 12 PLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLVVY GKD L K FRNIPGVE V+ LNLL+LAPGGH+GRFV+WT SAF+ LD
Sbjct: 209 PLVVYNPETDGKD--LVKGFRNIPGVETCPVNALNLLQLAPGGHLGRFVVWTSSAFQALD 266
Query: 67 ALYGSWKTKAPLKKGYSLP 85
+YGS + K+ + LP
Sbjct: 267 DIYGSTTEASAHKRDFLLP 285
>gi|380495150|emb|CCF32612.1| ribosomal protein L4/L1 [Colletotrichum higginsianum]
Length = 351
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRN+PGVE V+ LNLL+LAPGGH+GRFV+WT +AFK LD +
Sbjct: 209 PLVIYDPEVDGKELVTAFRNVPGVETSPVTALNLLQLAPGGHLGRFVVWTSAAFKSLDTI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YG+ + LKK + LP
Sbjct: 269 YGTTTQPSALKKDFLLP 285
>gi|159117180|ref|XP_001708810.1| Ribosomal protein L4 [Giardia lamblia ATCC 50803]
gi|157436924|gb|EDO81136.1| Ribosomal protein L4 [Giardia lamblia ATCC 50803]
Length = 316
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR I R+GPLV+Y + + + FRN+PGV+L VS + LL+LAPG H GR ++WT+S
Sbjct: 184 MRNRRYITRKGPLVIYNTE-DVARGFRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKS 242
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF LD +Y + K+ Y+LP+ + T +R++
Sbjct: 243 AFASLDDVYAA-------KQNYTLPRSCITQTDIERIL 273
>gi|154308794|ref|XP_001553732.1| 60S ribosomal protein L2 [Botryotinia fuckeliana B05.10]
Length = 280
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L +AFRN+PGVE V LNLL+LAPGGH+GRF+IW+ SAFK LD +
Sbjct: 116 PLVVYDGNADGKELVRAFRNLPGVETCDVFSLNLLQLAPGGHLGRFIIWSSSAFKALDNI 175
Query: 69 YGSWKTKAPLKKGYSLP 85
YG+ + LKK + LP
Sbjct: 176 YGTTTAPSALKKDFLLP 192
>gi|347838656|emb|CCD53228.1| similar to 60S ribosomal protein L4 [Botryotinia fuckeliana]
Length = 373
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L +AFRN+PGVE V LNLL+LAPGGH+GRF+IW+ SAFK LD +
Sbjct: 209 PLVVYDGNADGKELVRAFRNLPGVETCDVFSLNLLQLAPGGHLGRFIIWSSSAFKALDNI 268
Query: 69 YGSWKTKAPLKKGYSLPQ 86
YG+ + LKK + LP
Sbjct: 269 YGTTTAPSALKKDFLLPS 286
>gi|389635027|ref|XP_003715166.1| 60S ribosomal protein L4-A [Magnaporthe oryzae 70-15]
gi|351647499|gb|EHA55359.1| 60S ribosomal protein L4-A [Magnaporthe oryzae 70-15]
gi|440467992|gb|ELQ37177.1| 60S ribosomal protein L4-A [Magnaporthe oryzae Y34]
gi|440482348|gb|ELQ62848.1| 60S ribosomal protein L4-A [Magnaporthe oryzae P131]
Length = 371
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 12 PLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLV+Y G D L K FRNIPGVE SV LNLL+LAPGGH+GRF++WT + FK LD
Sbjct: 209 PLVIYDPATDGTD--LVKGFRNIPGVETSSVYSLNLLQLAPGGHLGRFIVWTSAGFKALD 266
Query: 67 ALYGSWKTKAPLKKGYSLP 85
+YG+ T + LKK + LP
Sbjct: 267 NIYGTTTTPSALKKDFLLP 285
>gi|156062570|ref|XP_001597207.1| 60S ribosomal protein L4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154696737|gb|EDN96475.1| 60S ribosomal protein L4 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 373
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 12 PLVVY-GKDRG--LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY G G L +AFRN+PGVE V LNLL+LAPGGH+GRF+IW+ SAFK LD +
Sbjct: 209 PLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNI 268
Query: 69 YGSWKTKAPLKKGYSLPQ 86
YG+ + LKK + LP
Sbjct: 269 YGTTTAPSALKKDFLLPS 286
>gi|132759|sp|P14117.1|RL4_XENTR RecName: Full=60S ribosomal protein L4; AltName: Full=L1
gi|214751|gb|AAA49951.1| ribosomal protein L1 [Xenopus (Silurana) tropicalis]
Length = 96
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 32 VELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
+ L++VSKLNLL+LA GGHVGRF IWTES+F+KLD LYG+W+ A LK Y+LP KM N
Sbjct: 1 ITLLNVSKLNLLRLALGGHVGRFCIWTESSFRKLDDLYGTWRKSAKLKADYNLPMHKMTN 60
Query: 92 T 92
T
Sbjct: 61 T 61
>gi|361129453|gb|EHL01360.1| putative 60S ribosomal protein L4-A [Glarea lozoyensis 74030]
Length = 999
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 7/79 (8%)
Query: 12 PLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLVVY GKD L+ AFRNI GVE SV LNLL+LAPGGH+GRF+IWT +AFK LD
Sbjct: 835 PLVVYDPEVDGKD--LSLAFRNISGVETSSVFALNLLQLAPGGHLGRFIIWTSAAFKALD 892
Query: 67 ALYGSWKTKAPLKKGYSLP 85
+YGS T + LKK + LP
Sbjct: 893 TIYGSTTTPSALKKDFLLP 911
>gi|53913381|emb|CAH59750.2| ribosomal protein L4 [Mus musculus]
Length = 71
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 38 SKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SKLN+LKLAPGGHVGRF IWTESAF+KLD LYG+W+ A LK Y+LP KM NT
Sbjct: 1 SKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNT 55
>gi|302416655|ref|XP_003006159.1| 60S ribosomal protein L4 [Verticillium albo-atrum VaMs.102]
gi|261355575|gb|EEY18003.1| 60S ribosomal protein L4 [Verticillium albo-atrum VaMs.102]
gi|346974202|gb|EGY17654.1| 60S ribosomal protein L4-B [Verticillium dahliae VdLs.17]
Length = 352
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L FRNI GVE +V+ LNLL+LAPGGH+GRF++WT +AFK LD +
Sbjct: 209 PLVVYDPEVDGKELISGFRNIAGVETSAVTDLNLLQLAPGGHLGRFIVWTSAAFKALDTI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YG+ T + LKK + LP
Sbjct: 269 YGTTTTPSELKKDFLLP 285
>gi|308159492|gb|EFO62020.1| Ribosomal protein L4 [Giardia lamblia P15]
Length = 316
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR I R+GPLV+Y + + + FRNI GV+L VS + LL+LAPG H GR ++WT+S
Sbjct: 184 MRNRRYITRKGPLVIYNTE-DVARGFRNISGVDLCHVSSIRLLELAPGSHPGRLILWTKS 242
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF LD +Y + K+ Y+LP+ + T +R++
Sbjct: 243 AFASLDDVYAA-------KQNYTLPRACITQTDIERIL 273
>gi|440632652|gb|ELR02571.1| large subunit ribosomal protein L4e [Geomyces destructans 20631-21]
Length = 373
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 12 PLVVYG---KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY L+ AFRNI GVE SV LNLL+LAPGGH+GRFVIWT +AFK LD +
Sbjct: 209 PLVVYNPLEDGTELSLAFRNIAGVETSSVFALNLLQLAPGGHLGRFVIWTSAAFKALDTV 268
Query: 69 YGSWKTKAPLKKGYSLPQ 86
YGS + LKK + LP
Sbjct: 269 YGSTTAPSALKKDFLLPS 286
>gi|302909239|ref|XP_003050029.1| 60S ribosomal protein L4 [Nectria haematococca mpVI 77-13-4]
gi|256730966|gb|EEU44316.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 352
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRNIPGVE V+ LNLL+LAPGGH+GRF++WT +AFK LD +
Sbjct: 209 PLVIYDAETDGKELVTAFRNIPGVETSPVTALNLLQLAPGGHLGRFIVWTSAAFKALDQI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 269 YGSTTEASAHKRDFLLP 285
>gi|290985315|ref|XP_002675371.1| predicted protein [Naegleria gruberi]
gi|284088967|gb|EFC42627.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-----LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFV 55
MRNRR ++GPLVVY G + A RN+PGV++++V +LNLLKLAPGGH GR +
Sbjct: 196 MRNRRYTLKKGPLVVYNAKPGTQTPPIVLAVRNLPGVDVLNVHQLNLLKLAPGGHPGRLI 255
Query: 56 IWTESAFKKLDALYGSWKTK-----APLKKG--YSLPQPKMANT 92
+WTESAF L+ +GS + + G Y LP+P NT
Sbjct: 256 VWTESAFTALNEKFGSINNEKGAATTHFRSGATYHLPRPVAVNT 299
>gi|85101200|ref|XP_961104.1| 60S ribosomal protein L4 [Neurospora crassa OR74A]
gi|12718316|emb|CAC28667.1| probable ribosomal protein RPL4A [Neurospora crassa]
gi|28922643|gb|EAA31868.1| 60S ribosomal protein L4-A [Neurospora crassa OR74A]
Length = 361
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 14/80 (17%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L K FRNIPGVE V LNLL+LAPGGH+GRF++WT +A K+L
Sbjct: 206 GPLVVYSAETDGKD--LIKGFRNIPGVETSPVDALNLLQLAPGGHLGRFIVWTSAAIKEL 263
Query: 66 DALYGSWKTKAPLKKGYSLP 85
DA+Y S KKG+ LP
Sbjct: 264 DAVYES-------KKGFQLP 276
>gi|336473010|gb|EGO61170.1| hypothetical protein NEUTE1DRAFT_116009 [Neurospora tetrasperma
FGSC 2508]
gi|350293740|gb|EGZ74825.1| putative ribosomal protein RPL4A [Neurospora tetrasperma FGSC 2509]
Length = 361
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 14/80 (17%)
Query: 11 GPLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
GPLVVY GKD L K FRNIPGVE V LNLL+LAPGGH+GRF++WT +A K+L
Sbjct: 206 GPLVVYSAETDGKD--LIKGFRNIPGVETSPVDALNLLQLAPGGHLGRFIVWTSAAIKEL 263
Query: 66 DALYGSWKTKAPLKKGYSLP 85
DA+Y S KKG+ LP
Sbjct: 264 DAVYES-------KKGFQLP 276
>gi|429964166|gb|ELA46164.1| hypothetical protein VCUG_02333 [Vavraia culicis 'floridensis']
Length = 325
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR ++GPL+VY K+ TKAFRN+ GV++ V LN+L+L PGG GR VIW +
Sbjct: 191 MRNRRYKVKKGPLIVYDKEI-CTKAFRNVQGVDMCRVDDLNVLELCPGGQPGRLVIWMKD 249
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
AF KL L+G + +A LK G+ L +
Sbjct: 250 AFVKLHDLFGDLENEANLKAGFLLTE 275
>gi|320588706|gb|EFX01174.1| 60S ribosomal protein [Grosmannia clavigera kw1407]
Length = 356
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PL +Y + + L FRNIPGVE SV LNLL+LAPGGH+GRFVIWT +AF LD +
Sbjct: 209 PLFIYDPEVDGKELVHGFRNIPGVETNSVFALNLLQLAPGGHLGRFVIWTSAAFAALDKI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + LKK + LP
Sbjct: 269 YGSTTAPSALKKDFLLP 285
>gi|46125617|ref|XP_387362.1| hypothetical protein FG07186.1 [Gibberella zeae PH-1]
Length = 352
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRNI GVE V+ LNLL+LAPGGH+GRF++WT AFK LD++
Sbjct: 209 PLVIYSPETDGKELVTAFRNITGVETCPVTALNLLQLAPGGHLGRFIVWTSGAFKALDSI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 269 YGSTTEASAHKRDFLLP 285
>gi|408397505|gb|EKJ76647.1| hypothetical protein FPSE_03197 [Fusarium pseudograminearum CS3096]
Length = 352
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRNI GVE V+ LNLL+LAPGGH+GRF++WT AFK LD++
Sbjct: 209 PLVIYSPETDGKELVTAFRNITGVETCPVTALNLLQLAPGGHLGRFIVWTSGAFKALDSI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 269 YGSTTEASAHKRDFLLP 285
>gi|171692867|ref|XP_001911358.1| hypothetical protein [Podospora anserina S mat+]
gi|170946382|emb|CAP73183.1| unnamed protein product [Podospora anserina S mat+]
Length = 361
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 10/84 (11%)
Query: 12 PLVVYG---KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + L + FRNIPGVE V LNLL+LAPGGH+GRFVIWT +A K+LDA+
Sbjct: 207 PLVVYSPSTDGKELVQGFRNIPGVETSPVDALNLLQLAPGGHLGRFVIWTSAAIKELDAV 266
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
Y S KKG+ LP +AN
Sbjct: 267 YES-------KKGFFLPSNVVANA 283
>gi|160331635|ref|XP_001712524.1| rpl1 [Hemiselmis andersenii]
gi|159765973|gb|ABW98199.1| rpl1 [Hemiselmis andersenii]
Length = 312
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRRR + GPL+++ K+ +AFRNIPG+E + LN+ KLAPGGHVGRF IWT
Sbjct: 194 LRNRRRKKYLGPLIIFEKN---ARAFRNIPGIETCCIDYLNIQKLAPGGHVGRFCIWTYK 250
Query: 61 AFKKLDALY 69
+F KLD +Y
Sbjct: 251 SFSKLDQIY 259
>gi|340914798|gb|EGS18139.1| 60S ribosomal protein L4-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 365
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PL+VY + + L K FRNIPGVE V LNLL+LAPGGH+GRF++WT +A K+LDA+
Sbjct: 209 PLIVYSPEHDGKELVKGFRNIPGVETCPVDALNLLQLAPGGHLGRFIVWTSAAIKQLDAV 268
Query: 69 YGSWKTKAPLKKGYSLP 85
Y S KKG+ LP
Sbjct: 269 YES-------KKGFFLP 278
>gi|367025643|ref|XP_003662106.1| hypothetical protein MYCTH_2302271 [Myceliophthora thermophila ATCC
42464]
gi|347009374|gb|AEO56861.1| hypothetical protein MYCTH_2302271 [Myceliophthora thermophila ATCC
42464]
Length = 365
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L K FRNIPGVE V LNLL+LAPGGH+GRF++WT +A K+LD++
Sbjct: 209 PLVVYSPETDGKELVKGFRNIPGVETCPVDALNLLQLAPGGHLGRFIVWTSAAIKQLDSV 268
Query: 69 YGSWKTKAPLKKGYSLP 85
Y S KKG+ LP
Sbjct: 269 YES-------KKGFYLP 278
>gi|116198121|ref|XP_001224872.1| 60S ribosomal protein L4 [Chaetomium globosum CBS 148.51]
gi|88178495|gb|EAQ85963.1| hypothetical protein CHGG_07216 [Chaetomium globosum CBS 148.51]
Length = 365
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 14/86 (16%)
Query: 12 PLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLVVY GKD L K FRNI GVE V LNLL+LAPGGH+GRF++WT +A K+LD
Sbjct: 209 PLVVYSAEADGKD--LVKGFRNITGVETCPVDALNLLQLAPGGHLGRFIVWTSAAIKELD 266
Query: 67 ALYGSWKTKAPLKKGYSLPQPKMANT 92
A+Y S KKG+ LP +A
Sbjct: 267 AVYDS-------KKGFFLPSSVVAQA 285
>gi|222424606|dbj|BAH20258.1| AT3G09630 [Arabidopsis thaliana]
Length = 173
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 33 ELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
EL V +LNLLKLAPGGH+GRFVIWT+SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 1 ELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 60
>gi|154421449|ref|XP_001583738.1| ribosomal protein [Trichomonas vaginalis G3]
gi|121917981|gb|EAY22752.1| ribosomal protein, putative [Trichomonas vaginalis G3]
Length = 370
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
++GPLV+Y +D+G+ KAFRNIPGVE ISV L L KLAP VGR IWTESAFK LD +
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTIWTESAFKALDGI 260
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
Y S KK +SLP+ M N
Sbjct: 261 YES-------KKRFSLPRSIMTNA 277
>gi|123490224|ref|XP_001325568.1| ribosomal protein [Trichomonas vaginalis G3]
gi|121908469|gb|EAY13345.1| ribosomal protein, putative [Trichomonas vaginalis G3]
Length = 370
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
++GPLV+Y +D+G+ KAFRNIPGVE ISV L L KLAP VGR +WTESAFK LD +
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGI 260
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
Y S KK +SLP+ M N
Sbjct: 261 YES-------KKRFSLPRSIMTNA 277
>gi|123449817|ref|XP_001313624.1| ribosomal protein [Trichomonas vaginalis G3]
gi|123486300|ref|XP_001324688.1| ribosomal protein [Trichomonas vaginalis G3]
gi|121895514|gb|EAY00695.1| ribosomal protein, putative [Trichomonas vaginalis G3]
gi|121907575|gb|EAY12465.1| ribosomal protein, putative [Trichomonas vaginalis G3]
Length = 370
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Query: 9 RRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
++GPLV+Y +D+G+ KAFRNIPGVE ISV L L KLAP VGR +WTESAFK LD +
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGI 260
Query: 69 YGSWKTKAPLKKGYSLPQPKMANT 92
Y S KK +SLP+ M N
Sbjct: 261 YES-------KKRFSLPRSIMTNA 277
>gi|399949696|gb|AFP65354.1| 60S ribosomal protein L1 [Chroomonas mesostigmatica CCMP1168]
Length = 291
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR+ GPL++Y + + FRNI G++L S++ LNLL LAPGGHVGRF IWT
Sbjct: 190 MRNRKFKNYIGPLMIYENN---LRCFRNISGIQLCSINSLNLLALAPGGHVGRFCIWTYK 246
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
+F KLD ++ +K + K +P+
Sbjct: 247 SFMKLDLMFSLFKNEKQHKNSNVIPK 272
>gi|336274835|ref|XP_003352171.1| 60S ribosomal protein L4 [Sordaria macrospora k-hell]
gi|380092250|emb|CCC10026.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 361
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 14/79 (17%)
Query: 12 PLVVY-----GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLVVY GKD L + FRNI GVE V LNLL+LAPGGH+GRF++WT +A K+LD
Sbjct: 207 PLVVYSAETDGKD--LVQGFRNIAGVETSPVDALNLLQLAPGGHLGRFIVWTSAAIKELD 264
Query: 67 ALYGSWKTKAPLKKGYSLP 85
A+Y S KKG+ LP
Sbjct: 265 AVYES-------KKGFQLP 276
>gi|440491806|gb|ELQ74414.1| Ribosomal protein RPL1/RPL2/RL4L4 [Trachipleistophora hominis]
Length = 325
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR ++GPL+VY + KAFRN+ GV++ V L++L+L PGG GR VIW +
Sbjct: 191 MRNRRYKVKKGPLIVYDGEI-CAKAFRNVQGVDMCQVDSLSVLELCPGGQPGRLVIWMKD 249
Query: 61 AFKKLDALYGSWKTKAPLKKGYSL 84
AF KL L+G ++ +A LK G+ L
Sbjct: 250 AFLKLHDLFGDFENEANLKPGFLL 273
>gi|175378485|gb|ACB72434.1| ribosomal protein L4 [Xenopus muelleri]
Length = 225
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWT 58
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWT
Sbjct: 178 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWT 225
>gi|269867234|ref|XP_002652528.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220062292|gb|EED41528.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 197
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 70 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 127
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFKKL+ ++ S K ++LP + +
Sbjct: 128 AFKKLEVIFSSES-----KHKFNLPNKMITES 154
>gi|367038629|ref|XP_003649695.1| 60S ribosomal protein L4 [Thielavia terrestris NRRL 8126]
gi|346996956|gb|AEO63359.1| hypothetical protein THITE_134121 [Thielavia terrestris NRRL 8126]
Length = 365
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 10/77 (12%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLVVY + + L K RN+PGVE V LNLL+LAPGGH+GRF+IWT +A ++LDA+
Sbjct: 209 PLVVYSAEADGKELVKGLRNLPGVETSPVDALNLLQLAPGGHLGRFIIWTSAAIQQLDAI 268
Query: 69 YGSWKTKAPLKKGYSLP 85
Y S KKG+ LP
Sbjct: 269 YES-------KKGFVLP 278
>gi|432104461|gb|ELK31084.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 109
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
M NR IQ RGP ++Y +D G K F NIP + L++ + + P G G F IW E+
Sbjct: 8 MTNRGPIQLRGPHLIYNEDNGAIKVFSNIPRITLLNAA----VNRDPFGS-GHFCIWAET 62
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK 93
A +KLD LYG+W+ A LK +LP PKM NT
Sbjct: 63 ASRKLDELYGTWRRAASLKSSSNLPTPKMLNTN 95
>gi|269866082|ref|XP_002652149.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220063065|gb|EED41907.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 288
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 161 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 218
Query: 61 AFKKLDALYGS 71
AFKKL+ ++ S
Sbjct: 219 AFKKLEVIFSS 229
>gi|269863508|ref|XP_002651248.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220064880|gb|EED42809.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 251
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 124 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 181
Query: 61 AFKKLDALYGS 71
AFKKL+ ++ S
Sbjct: 182 AFKKLEVIFSS 192
>gi|269862132|ref|XP_002650717.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220065724|gb|EED43339.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 319
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 192 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 249
Query: 61 AFKKLDALYGS 71
AFKKL+ ++ S
Sbjct: 250 AFKKLEVIFSS 260
>gi|269863125|ref|XP_002651104.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220065118|gb|EED42952.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 319
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 192 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 249
Query: 61 AFKKLDALYGS 71
AFKKL+ ++ S
Sbjct: 250 AFKKLEVIFSS 260
>gi|269862283|ref|XP_002650777.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220065632|gb|EED43278.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 319
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 192 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 249
Query: 61 AFKKLDALYGS 71
AFKKL+ ++ S
Sbjct: 250 AFKKLEVIFSS 260
>gi|269863418|ref|XP_002651215.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220064936|gb|EED42841.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 282
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 192 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 249
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQ 86
AFKKL ++ S K ++LP
Sbjct: 250 AFKKLKVIFSSES-----KPNFNLPN 270
>gi|342875999|gb|EGU77664.1| hypothetical protein FOXB_11839 [Fusarium oxysporum Fo5176]
Length = 1393
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 12 PLVVYGKD---RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
PLV+Y + + L AFRNI GVE V+ LNLL+LAPGGH+GRF++WT +AFK LD +
Sbjct: 1250 PLVIYDPETDGKELVTAFRNITGVETSPVTALNLLQLAPGGHLGRFIVWTSAAFKALDEI 1309
Query: 69 YGSWKTKAPLKKGYSLP 85
YGS + K+ + LP
Sbjct: 1310 YGSTTEASAHKRDFLLP 1326
>gi|301170796|dbj|BAJ12012.1| ribosomal protein L4 [Samia cynthia walkeri]
Length = 50
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 44/45 (97%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKL 45
MRNRRR+QR+GPL++Y KD+GLT+AFRNIPG+E+++V+KLNLLKL
Sbjct: 6 MRNRRRVQRKGPLIIYNKDKGLTRAFRNIPGIEMLNVNKLNLLKL 50
>gi|297851954|ref|XP_002893858.1| hypothetical protein ARALYDRAFT_314007 [Arabidopsis lyrata subsp.
lyrata]
gi|297339700|gb|EFH70117.1| hypothetical protein ARALYDRAFT_314007 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 14/92 (15%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR I R+GPL+VYG L +AFRNI G+++ +V +L+LLKLAPGGH+GR
Sbjct: 88 MRNRRYIFRKGPLIVYGTKGSLVEAFRNITGIDICNVERLSLLKLAPGGHLGR------- 140
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
+ A S+ +GY L +PKM N
Sbjct: 141 SLSLFTARLRSY-------QGYVLLRPKMLNA 165
>gi|289919140|gb|ADD21622.1| ribosomal protein L4 [Micromenia fodiens]
Length = 172
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKL 45
MRNRRRI +RGP++VY KD GLT+AFRNIPG+ +++VSKLNLLKL
Sbjct: 128 MRNRRRIMKRGPVIVYNKDNGLTRAFRNIPGITMLNVSKLNLLKL 172
>gi|15678034|ref|NP_275148.1| 50S ribosomal protein L4 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122746|sp|O26111.1|RL4_METTH RecName: Full=50S ribosomal protein L4P
gi|2621050|gb|AAB84523.1| ribosomal protein L4 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 254
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ RGPL+V G D+G+T+ RN PGV+++ V LN LAPG H GR ++T S
Sbjct: 185 MRGRKYRTPRGPLIVVGDDKGITRGARNHPGVDVVRVENLNAELLAPGTHPGRLTVFTRS 244
Query: 61 AFKKLDALY 69
A +KLD L+
Sbjct: 245 AIEKLDELF 253
>gi|403222169|dbj|BAM40301.1| 60S ribosomal protein L4/L1 [Theileria orientalis strain Shintoku]
Length = 358
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 11 GPLVVY-GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
GPLVV +AFRNIPGVE+ SV +LNLLKLAP G++GR VIW++SAF+ LD++
Sbjct: 198 GPLVVLRASAVEGRRAFRNIPGVEVASVERLNLLKLAPAGNLGRLVIWSKSAFESLDSV 256
>gi|402468370|gb|EJW03534.1| hypothetical protein EDEG_02118 [Edhazardia aedis USNM 41457]
Length = 328
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
G L+++ + L FRN+PGVE ++++ L+LLK+ PGGH+GR IWTESAFK +D+
Sbjct: 204 GILIIHNDNDIL--GFRNVPGVEFMNINNLDLLKICPGGHLGRLCIWTESAFKNIDS 258
>gi|440909832|gb|ELR59699.1| 60S ribosomal protein L4 [Bos grunniens mutus]
Length = 113
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWT 58
MRN RR+Q RGP ++ +D G+ +AFRNIPG I+ SKL++LKLAP GHVGRF + T
Sbjct: 59 MRNPRRVQCRGPSLICNEDSGIIRAFRNIPG---INGSKLHILKLAPDGHVGRFCVRT 113
>gi|386001184|ref|YP_005919483.1| 50S ribosomal protein L4P [Methanosaeta harundinacea 6Ac]
gi|357209240|gb|AET63860.1| 50S ribosomal protein L4P [Methanosaeta harundinacea 6Ac]
Length = 253
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR Q + L+V G++ GL +A RN+PGV++ +V +LN+ LAPG H GR +WTES
Sbjct: 183 MRGRRYKQPKSLLIVAGREGGLIRASRNLPGVDVTTVDRLNVELLAPGTHAGRLTVWTES 242
Query: 61 AFKKLDALYG 70
+ + L YG
Sbjct: 243 SLRWLGETYG 252
>gi|312137076|ref|YP_004004413.1| 50S ribosomal protein L4 [Methanothermus fervidus DSM 2088]
gi|311224795|gb|ADP77651.1| LSU ribosomal protein L4P [Methanothermus fervidus DSM 2088]
Length = 255
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + +GPL+V +DRG+ RN PGV++++V LN+ LAPG H GRF I+T+S
Sbjct: 186 MRGRKYRKPKGPLIVVDEDRGIVLGARNHPGVDIVTVENLNVELLAPGTHPGRFTIYTKS 245
Query: 61 AFKKLDAL 68
A +KL+ +
Sbjct: 246 ALEKLEEM 253
>gi|269863801|ref|XP_002651350.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220064689|gb|EED42707.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 252
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH+GR ++WTES
Sbjct: 191 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTES 248
Query: 61 AFK 63
A K
Sbjct: 249 ALK 251
>gi|18978196|ref|NP_579553.1| 50S ribosomal protein L4 [Pyrococcus furiosus DSM 3638]
gi|397652528|ref|YP_006493109.1| 50S ribosomal protein L4P [Pyrococcus furiosus COM1]
gi|46396648|sp|Q8TZZ9.1|RL4_PYRFU RecName: Full=50S ribosomal protein L4P
gi|428697970|pdb|3J21|D Chain D, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (50s Ribosomal Proteins)
gi|18894005|gb|AAL81948.1| LSU ribosomal protein L4P [Pyrococcus furiosus DSM 3638]
gi|393190119|gb|AFN04817.1| 50S ribosomal protein L4P [Pyrococcus furiosus COM1]
Length = 255
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVLGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L LYG
Sbjct: 246 AIERLRELYG 255
>gi|399217025|emb|CCF73712.1| unnamed protein product [Babesia microti strain RI]
Length = 392
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 11 GPLVVYG-KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA 67
GPL++ K KAFRN+PGVE+ +V +LNLLKLAPGG GR +W++SAF +LD+
Sbjct: 205 GPLIILSNKHCPARKAFRNLPGVEITTVDRLNLLKLAPGGTFGRLCVWSKSAFTQLDS 262
>gi|14520557|ref|NP_126032.1| 50S ribosomal protein L4P [Pyrococcus abyssi GE5]
gi|13124461|sp|Q9V1T6.1|RL4_PYRAB RecName: Full=50S ribosomal protein L4P
gi|5457773|emb|CAB49263.1| rpl4P LSU ribosomal protein L4P [Pyrococcus abyssi GE5]
gi|380741084|tpe|CCE69718.1| TPA: 50S ribosomal protein L4P [Pyrococcus abyssi GE5]
Length = 255
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLKEIYG 255
>gi|57641476|ref|YP_183954.1| 50S ribosomal protein L4P [Thermococcus kodakarensis KOD1]
gi|73917535|sp|Q5JDI0.1|RL4_PYRKO RecName: Full=50S ribosomal protein L4P
gi|57159800|dbj|BAD85730.1| LSU ribosomal protein L4P [Thermococcus kodakarensis KOD1]
Length = 255
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVEYLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|240104059|ref|YP_002960368.1| 50S ribosomal protein L4P [Thermococcus gammatolerans EJ3]
gi|259491577|sp|C5A285.1|RL4_THEGJ RecName: Full=50S ribosomal protein L4P
gi|239911613|gb|ACS34504.1| LSU ribosomal protein L4P (rpl4P) [Thermococcus gammatolerans EJ3]
Length = 255
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLKEIYG 255
>gi|389853116|ref|YP_006355350.1| 50S ribosomal protein L4e [Pyrococcus sp. ST04]
gi|388250422|gb|AFK23275.1| RPL4, large subunit ribosomal protein L4e [Pyrococcus sp. ST04]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVLGARNHPGVDVVIVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|337283645|ref|YP_004623119.1| 50S ribosomal protein L4P [Pyrococcus yayanosii CH1]
gi|334899579|gb|AEH23847.1| 50S ribosomal protein L4P [Pyrococcus yayanosii CH1]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ RN PGV+++ V L + LAPG H GR IWT+S
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVFGARNHPGVDVVVVDNLGIEHLAPGTHPGRLTIWTKS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|332158023|ref|YP_004423302.1| 50S ribosomal protein L4P [Pyrococcus sp. NA2]
gi|331033486|gb|AEC51298.1| 50S ribosomal protein L4P [Pyrococcus sp. NA2]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|409096183|ref|ZP_11216207.1| 50S ribosomal protein L4P [Thermococcus zilligii AN1]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|212223212|ref|YP_002306448.1| 50S ribosomal protein L4P [Thermococcus onnurineus NA1]
gi|226731435|sp|B6YSL4.1|RL4_THEON RecName: Full=50S ribosomal protein L4P
gi|212008169|gb|ACJ15551.1| LSU ribosomal protein L4P [Thermococcus onnurineus NA1]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVENLGVELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|14591534|ref|NP_143616.1| 50S ribosomal protein L4P [Pyrococcus horikoshii OT3]
gi|6094080|sp|O59420.1|RL4_PYRHO RecName: Full=50S ribosomal protein L4P
gi|3258211|dbj|BAA30894.1| 255aa long hypothetical 50S ribosomal protein L4 [Pyrococcus
horikoshii OT3]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|341582062|ref|YP_004762554.1| 50S ribosomal protein L4P [Thermococcus sp. 4557]
gi|340809720|gb|AEK72877.1| 50S ribosomal protein L4P [Thermococcus sp. 4557]
Length = 255
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPLVV K+ G+ + RN PGV++++V L + LAPG H GR +WT+
Sbjct: 186 MRGRRYKKAKGPLVVVAKNEGIVQGARNHPGVDVVTVENLGVELLAPGTHPGRLTVWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|390960793|ref|YP_006424627.1| 50S ribosomal protein L4P [Thermococcus sp. CL1]
gi|390519101|gb|AFL94833.1| 50S ribosomal protein L4P [Thermococcus sp. CL1]
Length = 255
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L+ LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVENLSAELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|330040445|ref|XP_003239916.1| 60S ribosomal protein L1 [Cryptomonas paramecium]
gi|327206842|gb|AEA39018.1| 60S ribosomal protein L1 [Cryptomonas paramecium]
Length = 304
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSW 72
L++Y K+ K FRNI VE ++ LNL KLAPGGH+GR +WT +F KLD L+G
Sbjct: 197 LIIYQKN---AKCFRNIFDVETCRITTLNLFKLAPGGHLGRLCMWTHFSFCKLDLLFGLK 253
Query: 73 KTKAPLKKGYSL 84
P GY L
Sbjct: 254 DNLRPQIAGYKL 265
>gi|223477902|ref|YP_002582388.1| 50S ribosomal protein L1e (L4p) [Thermococcus sp. AM4]
gi|214033128|gb|EEB73956.1| LSU ribosomal protein L1e (L4p) [Thermococcus sp. AM4]
Length = 255
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR +WT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVELLAPGTHPGRLTVWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|11499508|ref|NP_070749.1| 50S ribosomal protein L4P [Archaeoglobus fulgidus DSM 4304]
gi|3914743|sp|O28355.1|RL4_ARCFU RecName: Full=50S ribosomal protein L4P
gi|2648622|gb|AAB89332.1| LSU ribosomal protein L4P (rpl4P) [Archaeoglobus fulgidus DSM 4304]
Length = 252
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR ++++ L+V GKD G+ KA +N+PGV+ + V LN+ LAPG H GR +WT+S
Sbjct: 183 MRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKS 242
Query: 61 AFKKLDALYGSW 72
A + L G W
Sbjct: 243 AVEYL----GEW 250
>gi|375083293|ref|ZP_09730319.1| 50S ribosomal protein L4P [Thermococcus litoralis DSM 5473]
gi|374742024|gb|EHR78436.1| 50S ribosomal protein L4P [Thermococcus litoralis DSM 5473]
Length = 255
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV+++ V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIIQGARNHPGVDVVLVDNLGVELLAPGAHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|242398280|ref|YP_002993704.1| 50S ribosomal protein L4P [Thermococcus sibiricus MM 739]
gi|259491578|sp|C6A160.1|RL4_THESM RecName: Full=50S ribosomal protein L4P
gi|242264673|gb|ACS89355.1| 50S ribosomal protein L4P [Thermococcus sibiricus MM 739]
Length = 255
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV+++ V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIIQGARNHPGVDVVVVDNLGVELLAPGAHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L YG
Sbjct: 246 AIERLREFYG 255
>gi|304314254|ref|YP_003849401.1| 50S ribosomal protein L1e [Methanothermobacter marburgensis str.
Marburg]
gi|302587713|gb|ADL58088.1| 50S ribosomal protein L1e [Methanothermobacter marburgensis str.
Marburg]
Length = 254
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ +GPL+V G D+G+ RN PGV++++V LN LAPG H GR ++T S
Sbjct: 185 MRGRKYRTPKGPLIVVGDDKGIALGARNHPGVDVVTVENLNAELLAPGTHPGRLTVFTRS 244
Query: 61 AFKKLDALY 69
A +KL+ L+
Sbjct: 245 AIEKLEGLF 253
>gi|432095302|gb|ELK26522.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 154
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVG 52
RN RIQ RG ++ +D G+ K FRNIPG+ L VSKLN+LKLAPGG+VG
Sbjct: 104 RNHIRIQCRGLCIICKEDTGIIKTFRNIPGITLRDVSKLNILKLAPGGYVG 154
>gi|298674801|ref|YP_003726551.1| 50S ribosomal protein L4P [Methanohalobium evestigatum Z-7303]
gi|298287789|gb|ADI73755.1| 50S ribosomal protein L4P [Methanohalobium evestigatum Z-7303]
Length = 253
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q++ L+V + + KA RN+PGVE+ ++ LN LAPG H GR +WTESA
Sbjct: 185 RGRKYRQKKSVLIVVSDNNSVIKAARNLPGVEVATIGSLNAELLAPGTHAGRLTVWTESA 244
Query: 62 FKKLDALY 69
L+ +Y
Sbjct: 245 ISSLEGMY 252
>gi|170291101|ref|YP_001737917.1| 50S ribosomal protein L4P [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175181|gb|ACB08234.1| Ribosomal protein L4 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 265
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R R + RGPL++Y + D L A RNIPGV+ +S+ L+++ LAPGG GR IW+E
Sbjct: 193 MRGRVRQRARGPLIIYSREDSPLKLASRNIPGVDAVSLRNLSVMHLAPGGKPGRLTIWSE 252
Query: 60 SAFKKLDAL 68
S+ + L+ +
Sbjct: 253 SSIRALEEV 261
>gi|417408999|gb|JAA51027.1| Putative 60s ribosomal protein l4, partial [Desmodus rotundus]
Length = 247
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RN I RGP ++Y +D G+ KAFRNIPG+ L + SKL++LK APGGH W S
Sbjct: 110 IRNCHWIWPRGPGIIYNEDSGVIKAFRNIPGITLHNGSKLDILKFAPGGH------WAVS 163
Query: 61 AFKKLDALYGSW 72
AF L L SW
Sbjct: 164 AF-ALKVLSVSW 174
>gi|162605830|ref|XP_001713430.1| 60s ribosomal protein L1 [Guillardia theta]
gi|13794362|gb|AAK39739.1|AF083031_96 60s ribosomal protein L1 [Guillardia theta]
Length = 255
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + GPL+V+ + K+ RNI ++ + +S LNL KLAPGGH+GR IW+
Sbjct: 190 MRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNLTKLAPGGHLGRLCIWSSK 246
Query: 61 AFKKLDAL 68
AF+ L+ +
Sbjct: 247 AFQMLNTI 254
>gi|330508497|ref|YP_004384925.1| 50S ribosomal protein L4/L1 family [Methanosaeta concilii GP6]
gi|328929305|gb|AEB69107.1| ribosomal protein L4/L1 family [Methanosaeta concilii GP6]
Length = 257
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ R+ L+V G D GL KA RN+PGV+ ++V LN LAPG GR +WTES
Sbjct: 183 LRGRKYKGRKSLLIVAGNDAGLGKAARNLPGVDFVTVDMLNAELLAPGTRAGRLTVWTES 242
Query: 61 AFKKL 65
+ +KL
Sbjct: 243 SLEKL 247
>gi|84489707|ref|YP_447939.1| 50S ribosomal protein L4P [Methanosphaera stadtmanae DSM 3091]
gi|109893604|sp|Q2NFV7.1|RL4_METST RecName: Full=50S ribosomal protein L4P
gi|84373026|gb|ABC57296.1| 50S ribosomal protein L1e [Methanosphaera stadtmanae DSM 3091]
Length = 259
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ +GPLVV G DRG++ RN GV+++ V+ +N LAPG H GR I+T+S
Sbjct: 186 LRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKS 245
Query: 61 AFKKLDALY 69
A +KL L+
Sbjct: 246 AIEKLGDLF 254
>gi|156085304|ref|XP_001610129.1| ribosomal protein RPL4A [Babesia bovis]
gi|154797381|gb|EDO06561.1| ribosomal protein RPL4A [Babesia bovis]
Length = 360
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 11/71 (15%)
Query: 2 RNRRRIQRRGPLV------VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFV 55
R+ R+ + GPL+ V GK +AFRNIPGVE+ V +LNLLKLAP G +GR
Sbjct: 190 RDGRKKRPVGPLIILRATAVEGK-----RAFRNIPGVEVACVERLNLLKLAPAGALGRLC 244
Query: 56 IWTESAFKKLD 66
+W++SAF+ LD
Sbjct: 245 VWSKSAFEALD 255
>gi|315229857|ref|YP_004070293.1| 50S ribosomal protein L1e (L4p) [Thermococcus barophilus MP]
gi|315182885|gb|ADT83070.1| LSU ribosomal protein L1e (L4p) [Thermococcus barophilus MP]
Length = 255
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ RN PGV+++ V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIILGARNHPGVDVVLVDNLGVEVLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>gi|383319754|ref|YP_005380595.1| 50S ribosomal protein L4 [Methanocella conradii HZ254]
gi|379321124|gb|AFD00077.1| LSU ribosomal protein L4P [Methanocella conradii HZ254]
Length = 250
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ ++ G L+V G+D+G+ RNIPGV++ ++ +N LAPG H GR +W+ES
Sbjct: 182 MRGRQYRKKVGVLIVVGEDKGIGLGARNIPGVDVATLDSVNAELLAPGTHPGRLTVWSES 241
Query: 61 AFKKLD 66
AFK ++
Sbjct: 242 AFKMME 247
>gi|336477160|ref|YP_004616301.1| 50S ribosomal protein L4P [Methanosalsum zhilinae DSM 4017]
gi|335930541|gb|AEH61082.1| 50S ribosomal protein L4P [Methanosalsum zhilinae DSM 4017]
Length = 252
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ QR+ L+V G L K+ RN+PGV+ + V LN+ LAPG H GR IWTESA
Sbjct: 185 RGRKYRQRKSILIVTGSQAPLLKSARNLPGVDAVPVDSLNIEHLAPGTHAGRLTIWTESA 244
Query: 62 FKKLD 66
L+
Sbjct: 245 ISNLE 249
>gi|410670350|ref|YP_006922721.1| LSU ribosomal protein L4P [Methanolobus psychrophilus R15]
gi|409169478|gb|AFV23353.1| LSU ribosomal protein L4P [Methanolobus psychrophilus R15]
Length = 253
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR R+ L+V D + ++ RN+ GV+++SV+ LN LAPG H GR +WTES
Sbjct: 184 LRGRRYKNRKSILIVASGDAAVFRSARNLAGVDVVSVTSLNAEILAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A L+ L+
Sbjct: 244 AIADLEGLF 252
>gi|284162459|ref|YP_003401082.1| 50S ribosomal protein L4 [Archaeoglobus profundus DSM 5631]
gi|284012456|gb|ADB58409.1| ribosomal protein L4/L1e [Archaeoglobus profundus DSM 5631]
Length = 252
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +R L+V GKD G+ KA +N+PGV+ + V LN+ LAPG GR +WT+S
Sbjct: 183 MRGRRYVMKRSVLLVVGKDDGVIKAAKNLPGVDAVLVKDLNVELLAPGCVAGRLTVWTKS 242
Query: 61 AFKKL 65
A + L
Sbjct: 243 AIEYL 247
>gi|429327762|gb|AFZ79522.1| 60S ribosomal subunit protein L4/L1, putative [Babesia equi]
Length = 352
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 24 KAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKA 76
+AFRNIPGVE+ +V +LNLLKLAP G +GR +W+++AF+ LD + KA
Sbjct: 210 RAFRNIPGVEVAAVERLNLLKLAPAGTLGRLCVWSKAAFEALDQVIAEKGIKA 262
>gi|71030984|ref|XP_765134.1| 60S ribosomal protein L4/L1 [Theileria parva strain Muguga]
gi|68352090|gb|EAN32851.1| 60S ribosomal protein L4/L1, putative [Theileria parva]
Length = 389
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 11 GPLVVYGKDRGLTK-AFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDAL 68
GPLVV K AFRNIPGV+++SV LNLLKLAP G +GR V+++ SAF+ LD +
Sbjct: 198 GPLVVLRSSAVEGKRAFRNIPGVDVVSVEHLNLLKLAPAGTLGRLVLYSRSAFELLDTV 256
>gi|84994848|ref|XP_952146.1| 60S ribosomal subunit protein L4/L1 [Theileria annulata strain
Ankara]
gi|65302307|emb|CAI74414.1| 60S ribosomal subunit protein L4/L1, putative [Theileria annulata]
Length = 426
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 11/64 (17%)
Query: 11 GPLVVY------GKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKK 64
GPLVV GK +AFRNIPGV+++SV +NLLKLAP G +GR VI+++SAF+
Sbjct: 198 GPLVVMRSTAVEGK-----RAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFEL 252
Query: 65 LDAL 68
LD+
Sbjct: 253 LDSC 256
>gi|326528923|dbj|BAJ97483.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 36 SVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
S S + L L GH+GRFVIWTESAFKKLD +YGS++ + KKG+ LP+ KM N
Sbjct: 206 SASTCSTLPLV--GHLGRFVIWTESAFKKLDEVYGSFEASSSKKKGFFLPRLKMTN 259
>gi|325958532|ref|YP_004289998.1| 50S ribosomal protein L4P [Methanobacterium sp. AL-21]
gi|325329964|gb|ADZ09026.1| 50S ribosomal protein L4P [Methanobacterium sp. AL-21]
Length = 260
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ +GPL+V G+D+G++ RN GV+++ V+ LN LAPG H GR I+T+S
Sbjct: 191 MRGRKYKTSKGPLLVVGEDKGISLGARNHAGVDVVVVNHLNAELLAPGTHPGRLTIYTKS 250
Query: 61 AFKKLDALY 69
A +KL L+
Sbjct: 251 AVEKLGELF 259
>gi|91772084|ref|YP_564776.1| 50S ribosomal protein L4P [Methanococcoides burtonii DSM 6242]
gi|121691984|sp|Q12ZV0.1|RL4_METBU RecName: Full=50S ribosomal protein L4P
gi|91711099|gb|ABE51026.1| LSU ribosomal protein L4P [Methanococcoides burtonii DSM 6242]
Length = 253
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ R+ L+V G++ L+KA N+PGV++ +V+ LN LAPG H GR +WT+SA
Sbjct: 185 RGRKYKNRKSVLIVTGEESLLSKAANNLPGVDVATVTALNAELLAPGTHAGRLTVWTQSA 244
Query: 62 FKKLDALY 69
++ ++
Sbjct: 245 ITNMEGMF 252
>gi|452210663|ref|YP_007490777.1| LSU ribosomal protein L1e (L4p) [Methanosarcina mazei Tuc01]
gi|452100565|gb|AGF97505.1| LSU ribosomal protein L1e (L4p) [Methanosarcina mazei Tuc01]
Length = 253
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G++ + KA RN+ GV++++V LN LAPG H GR +WTES
Sbjct: 184 LRGRKYKHKKSVLIVTGENSPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A KL+ +
Sbjct: 244 AIGKLEGAF 252
>gi|21228227|ref|NP_634149.1| 50S ribosomal protein L4 [Methanosarcina mazei Go1]
gi|46396644|sp|Q8PV49.1|RL4_METMA RecName: Full=50S ribosomal protein L4P
gi|20906683|gb|AAM31821.1| LSU ribosomal protein L4 [Methanosarcina mazei Go1]
Length = 253
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G++ + KA RN+ GV++++V LN LAPG H GR +WTES
Sbjct: 184 LRGRKYKHKKSVLIVAGENSPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A KL+ +
Sbjct: 244 AIGKLEGAF 252
>gi|20089943|ref|NP_616018.1| 50S ribosomal protein L4 [Methanosarcina acetivorans C2A]
gi|46396645|sp|Q8TRU6.1|RL4_METAC RecName: Full=50S ribosomal protein L4P
gi|19914904|gb|AAM04498.1| ribosomal protein L4 [Methanosarcina acetivorans C2A]
Length = 253
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G++ + KA RN+ GV++++V LN LAPG H GR +WTES
Sbjct: 184 LRGRKYKHKKSVLIVAGENTPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A KL+ +
Sbjct: 244 AIGKLEGAF 252
>gi|77744720|gb|ABB02321.1| ribosomal protein L4 [Ovis aries]
Length = 87
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGH 50
QRRGP ++Y +D G+ KAFRNIPG+ L++VSKLN+ KLAPGGH
Sbjct: 43 QRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNISKLAPGGH 85
>gi|116755015|ref|YP_844133.1| 50S ribosomal protein L4P [Methanosaeta thermophila PT]
gi|121694875|sp|A0B9W9.1|RL4_METTP RecName: Full=50S ribosomal protein L4P
gi|116666466|gb|ABK15493.1| LSU ribosomal protein L4P [Methanosaeta thermophila PT]
Length = 251
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR Q R L+V D G+ +A RN+PGV+ ++ +LN LAPG H GR +W+E
Sbjct: 183 IRGRRFRQPRSILIVAAADNGIGRAARNLPGVDFVTADRLNAELLAPGTHAGRLTVWSEP 242
Query: 61 AFKKLD 66
+ K L+
Sbjct: 243 SLKVLE 248
>gi|288560109|ref|YP_003423595.1| ribosomal protein L4p Rpl4p [Methanobrevibacter ruminantium M1]
gi|288542819|gb|ADC46703.1| ribosomal protein L4p Rpl4p [Methanobrevibacter ruminantium M1]
Length = 254
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ +GPLVV +D+G+ RN GV++++V LN LAPG H GR I+T+SA
Sbjct: 186 RGRKYKSGKGPLVVVSEDKGIGLGARNHAGVDVVAVDNLNAELLAPGTHAGRLTIYTKSA 245
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 246 VEKLGGLF 253
>gi|73667661|ref|YP_303676.1| 50S ribosomal protein L4 [Methanosarcina barkeri str. Fusaro]
gi|109893602|sp|Q46G96.1|RL4_METBF RecName: Full=50S ribosomal protein L4P
gi|72394823|gb|AAZ69096.1| LSU ribosomal protein L4P [Methanosarcina barkeri str. Fusaro]
Length = 253
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G+ + KA RN+ GV++ +V LN LAPG H GR IWTES
Sbjct: 184 LRGRKYKHKKSVLIVAGESAPILKAARNLSGVDVATVDSLNAELLAPGTHAGRLTIWTES 243
Query: 61 AFKKLDALY 69
A +KL+ +
Sbjct: 244 AVEKLEGAF 252
>gi|147919333|ref|YP_686931.1| 50S ribosomal protein L4P [Methanocella arvoryzae MRE50]
gi|110622327|emb|CAJ37605.1| 50S ribosomal protein L4P [Methanocella arvoryzae MRE50]
Length = 253
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ ++ G L+V +D G+ A RNIPGV++ ++ +LN+ LAPG GR +WTE
Sbjct: 183 MRGRQYKKKVGLLIVIAEDNGIKLAARNIPGVDVATLDELNVEMLAPGTQAGRLTLWTEG 242
Query: 61 AFKKL 65
A K L
Sbjct: 243 AMKLL 247
>gi|282164891|ref|YP_003357276.1| 50S ribosomal protein L4P [Methanocella paludicola SANAE]
gi|282157205|dbj|BAI62293.1| 50S ribosomal protein L4P [Methanocella paludicola SANAE]
Length = 250
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
G L+V G+D+G+ A RNIPG +++++ ++N LAPG GR +W+ESA K ++
Sbjct: 192 GVLIVVGEDKGIVMAARNIPGCDVVTLDEVNTELLAPGTQAGRLTVWSESALKMME 247
>gi|397780845|ref|YP_006545318.1| 50S ribosomal protein L4P [Methanoculleus bourgensis MS2]
gi|396939347|emb|CCJ36602.1| 50S ribosomal protein L4P [Methanoculleus bourgensis MS2]
Length = 249
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+ L+V G + +A RN+ GV+ ++V++LN LAPG H GR +WTES
Sbjct: 183 MRGRRYKQRKSVLIVTGNE--PLRAARNLAGVDAVTVNQLNTELLAPGTHAGRLTVWTES 240
Query: 61 AFKKLD 66
A ++L+
Sbjct: 241 AIRRLE 246
>gi|256810688|ref|YP_003128057.1| 50S ribosomal protein L4P [Methanocaldococcus fervens AG86]
gi|256793888|gb|ACV24557.1| 50S ribosomal protein L4P [Methanocaldococcus fervens AG86]
Length = 252
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + R LVV G A RN+PGV++I+ L ++ LAPGG GR +WTES
Sbjct: 183 MRGRRYKKPRSVLVVVGDKCNAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTES 242
Query: 61 AFKKL 65
A +KL
Sbjct: 243 ALEKL 247
>gi|289191590|ref|YP_003457531.1| 50S ribosomal protein L4P [Methanocaldococcus sp. FS406-22]
gi|288938040|gb|ADC68795.1| 50S ribosomal protein L4P [Methanocaldococcus sp. FS406-22]
Length = 252
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + R LVV G A RN+PGV++I+ L ++ LAPGG GR +WTES
Sbjct: 183 MRGRRYKKPRSILVVVGDKCNAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTES 242
Query: 61 AFKKL 65
A +KL
Sbjct: 243 ALEKL 247
>gi|148642821|ref|YP_001273334.1| 50S ribosomal protein L4P [Methanobrevibacter smithii ATCC 35061]
gi|222445052|ref|ZP_03607567.1| hypothetical protein METSMIALI_00669 [Methanobrevibacter smithii
DSM 2375]
gi|261350379|ref|ZP_05975796.1| 50S ribosomal protein L4P [Methanobrevibacter smithii DSM 2374]
gi|226730693|sp|A5UL88.1|RL4_METS3 RecName: Full=50S ribosomal protein L4P
gi|148551838|gb|ABQ86966.1| ribosomal protein L1e [Methanobrevibacter smithii ATCC 35061]
gi|222434617|gb|EEE41782.1| 50S ribosomal protein L4P [Methanobrevibacter smithii DSM 2375]
gi|288861162|gb|EFC93460.1| 50S ribosomal protein L4P [Methanobrevibacter smithii DSM 2374]
Length = 254
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ + +GPL+V G+D G+ RN GV++++V LN LAPG H GR I+T+SA
Sbjct: 186 RGRKYKKVKGPLLVVGEDNGIKLGARNHAGVDVVTVENLNAELLAPGTHPGRLTIFTKSA 245
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 246 VEKLGGLF 253
>gi|315425681|dbj|BAJ47338.1| large subunit ribosomal protein L4e [Candidatus Caldiarchaeum
subterraneum]
gi|315427563|dbj|BAJ49162.1| large subunit ribosomal protein L4e [Candidatus Caldiarchaeum
subterraneum]
gi|343484511|dbj|BAJ50165.1| large subunit ribosomal protein L4e [Candidatus Caldiarchaeum
subterraneum]
Length = 272
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PL+V DRG+ KA NIPGVE+++ L++L LAPG GR ++T+SA K L+
Sbjct: 214 PLIVVAADRGVGKAASNIPGVEVVTAKDLSVLHLAPGAKPGRLTLFTKSALKALE 268
>gi|119719147|ref|YP_919642.1| 50S ribosomal protein L4P [Thermofilum pendens Hrk 5]
gi|119524267|gb|ABL77639.1| LSU ribosomal protein L4P [Thermofilum pendens Hrk 5]
Length = 267
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + + L+V G+ RG+ A RN+PGV++++ +L++L LAPGG+ GR ++T+S
Sbjct: 192 MRGRRYKKPKSLLIVVGEARGIELAARNMPGVDVVTYKELSVLHLAPGGNPGRLTVFTKS 251
Query: 61 AFKKLD 66
A K L+
Sbjct: 252 AVKGLE 257
>gi|15668349|ref|NP_247145.1| 50S ribosomal protein L4P [Methanocaldococcus jannaschii DSM 2661]
gi|1710567|sp|P54015.1|RL4_METJA RecName: Full=50S ribosomal protein L4P
gi|1498950|gb|AAB98162.1| LSU ribosomal protein L4P (rplD) [Methanocaldococcus jannaschii DSM
2661]
Length = 252
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + R LVV G A RN+PGV++I+ L ++ LAPGG GR +WTES
Sbjct: 183 MRGRKYKKPRSILVVVGDKCNAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTES 242
Query: 61 AFKKL 65
A +KL
Sbjct: 243 ALEKL 247
>gi|424812830|ref|ZP_18238070.1| ribosomal protein L4 [Candidatus Nanosalinarum sp. J07AB56]
gi|339757052|gb|EGQ40635.1| ribosomal protein L4 [Candidatus Nanosalinarum sp. J07AB56]
Length = 251
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDA--- 67
GPLVV +D G+ A NIPG++ V +L+ LAPG GR +++E+A KKL+A
Sbjct: 189 GPLVVVDRDDGVLSAASNIPGIDATEVDQLSAEDLAPGAKPGRLTVYSENALKKLEAEEL 248
Query: 68 LYG 70
YG
Sbjct: 249 FYG 251
>gi|126460190|ref|YP_001056468.1| 50S ribosomal protein L4 [Pyrobaculum calidifontis JCM 11548]
gi|126249911|gb|ABO09002.1| LSU ribosomal protein L4P [Pyrobaculum calidifontis JCM 11548]
Length = 285
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV + D L A RN PGV+++ VS LN+L LAPGG GR +WT
Sbjct: 215 MRGRRYKEPKSVLVVVSELDVPLIGAVRNFPGVDVVPVSHLNMLVLAPGGVPGRLTLWTA 274
Query: 60 SAFKKLDALY 69
+A ++L L+
Sbjct: 275 TAVERLKGLF 284
>gi|374635577|ref|ZP_09707173.1| 50S ribosomal protein L4P [Methanotorris formicicus Mc-S-70]
gi|373561879|gb|EHP88104.1| 50S ribosomal protein L4P [Methanotorris formicicus Mc-S-70]
Length = 254
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + R LVV G KA RN+PGV++I+ L ++ +APG GR +WTE+
Sbjct: 184 MRGRRYRKPRSVLVVVGDKCEAIKASRNLPGVDVITADNLGVIHIAPGAMAGRLTLWTEN 243
Query: 61 AFKKLDALY 69
A +KL +
Sbjct: 244 AIEKLSERF 252
>gi|146302877|ref|YP_001190193.1| 50S ribosomal protein L4P [Metallosphaera sedula DSM 5348]
gi|145701127|gb|ABP94269.1| LSU ribosomal protein L4P [Metallosphaera sedula DSM 5348]
Length = 263
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL VV+ + +A N+PGV+++S ++++ LAPGGH GR VI+TE
Sbjct: 189 MRGRKYKRTVGPLLVVHDPKLPIVEAALNLPGVDVVSAKDVSVIHLAPGGHAGRLVIYTE 248
Query: 60 SAFKKL 65
SA K L
Sbjct: 249 SALKVL 254
>gi|327400871|ref|YP_004341710.1| 50S ribosomal protein L4P [Archaeoglobus veneficus SNP6]
gi|327316379|gb|AEA46995.1| 50S ribosomal protein L4P [Archaeoglobus veneficus SNP6]
Length = 252
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR I ++ LVV K + A RN+PGV+++ LN+ LAPG H GR +WT+S
Sbjct: 183 MRGRRYIGKKSVLVVVSKPCSVMNAARNLPGVDVVLAKDLNVELLAPGTHPGRLTVWTKS 242
Query: 61 AFKKLD 66
A L+
Sbjct: 243 ALNVLE 248
>gi|193083865|gb|ACF09546.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 292
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR+R+ R L+V + GL KA RN+PGV++++ L+ LAPGG GR IWT++
Sbjct: 227 MRSRKYRTPRSLLLVVSQKDGLDKAARNVPGVDVVTAKDLSAEDLAPGGDPGRLTIWTKA 286
Query: 61 AFKKLD 66
A + L+
Sbjct: 287 AIEALE 292
>gi|261403780|ref|YP_003248004.1| 50S ribosomal protein L4P [Methanocaldococcus vulcanius M7]
gi|261370773|gb|ACX73522.1| 50S ribosomal protein L4P [Methanocaldococcus vulcanius M7]
Length = 252
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + R LVV G A RN+PGV++I+ L ++ LAPGG GR +WTE
Sbjct: 183 MRGRRYRKPRSVLVVVGDKCEAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTEK 242
Query: 61 AFKKL 65
A +KL
Sbjct: 243 ALEKL 247
>gi|395644917|ref|ZP_10432777.1| 50S ribosomal protein L4P [Methanofollis liminatans DSM 4140]
gi|395441657|gb|EJG06414.1| 50S ribosomal protein L4P [Methanofollis liminatans DSM 4140]
Length = 246
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+ L+V G D L +A RN+ G++ +S+ L+ LAPG H GR +WTES
Sbjct: 183 MRGRRYKQRKSLLIVTG-DEPL-RAARNLAGIDAVSIFDLDTEMLAPGTHAGRLTLWTES 240
Query: 61 AFKKLD 66
A K+++
Sbjct: 241 ALKRME 246
>gi|332796529|ref|YP_004458029.1| 50S ribosomal protein L4a [Acidianus hospitalis W1]
gi|332694264|gb|AEE93731.1| ribosomal protein L4a [Acidianus hospitalis W1]
Length = 265
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR +GPL V ++ + KA RNI G ++I+ +L+++ LAPGGH GR I+TE
Sbjct: 191 MRGRRYKIPKGPLFVIKDEKSPVIKAIRNIQGFDVITAKELSVIHLAPGGHPGRLTIFTE 250
Query: 60 SAFKKLDALYG 70
A + L+ +G
Sbjct: 251 GAIQVLNERFG 261
>gi|229579207|ref|YP_002837605.1| 50S ribosomal protein L4P [Sulfolobus islandicus Y.G.57.14]
gi|229582041|ref|YP_002840440.1| 50S ribosomal protein L4P [Sulfolobus islandicus Y.N.15.51]
gi|259491574|sp|C3NHA8.1|RL4_SULIN RecName: Full=50S ribosomal protein L4P
gi|259491575|sp|C3NEE4.1|RL4_SULIY RecName: Full=50S ribosomal protein L4P
gi|228009921|gb|ACP45683.1| ribosomal protein L4/L1e [Sulfolobus islandicus Y.G.57.14]
gi|228012757|gb|ACP48518.1| ribosomal protein L4/L1e [Sulfolobus islandicus Y.N.15.51]
Length = 267
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>gi|432332010|ref|YP_007250153.1| 50S ribosomal protein L4P [Methanoregula formicicum SMSP]
gi|432138719|gb|AGB03646.1| 50S ribosomal protein L4P [Methanoregula formicicum SMSP]
Length = 248
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+ L+V D+ LT A RN+ GV++++V +LN+ LAPG GR +WTE+
Sbjct: 183 MRGRRFKQRKSLLIVTA-DKPLTAA-RNLSGVDVVTVDQLNVEHLAPGMQAGRLTVWTEA 240
Query: 61 AFKKLD 66
A +L+
Sbjct: 241 ALTRLE 246
>gi|284997895|ref|YP_003419662.1| 50S ribosomal protein L4 [Sulfolobus islandicus L.D.8.5]
gi|284445790|gb|ADB87292.1| ribosomal protein L4/L1e [Sulfolobus islandicus L.D.8.5]
Length = 267
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>gi|126178515|ref|YP_001046480.1| 50S ribosomal protein L4 [Methanoculleus marisnigri JR1]
gi|166234684|sp|A3CSZ8.1|RL4_METMJ RecName: Full=50S ribosomal protein L4P
gi|125861309|gb|ABN56498.1| LSU ribosomal protein L4P [Methanoculleus marisnigri JR1]
Length = 249
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+ L+V G + +A RN+ GV+ ++V +LN LAPG GR IWTES
Sbjct: 183 MRGRRYKQRKSVLIVTGGE--PLRAARNLAGVDAVAVDQLNAELLAPGTQAGRLTIWTES 240
Query: 61 AFKKLD 66
A ++L+
Sbjct: 241 AIRRLE 246
>gi|374325727|ref|YP_005083927.1| 50S ribosomal protein L4P [Pyrobaculum sp. 1860]
gi|356640996|gb|AET31675.1| 50S ribosomal protein L4P [Pyrobaculum sp. 1860]
Length = 282
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV + L A RN PGV++++V+ LN+L LAPGG GR +WT
Sbjct: 212 MRGRRYKEPKSVLVVVSDAKAPLVAAVRNFPGVDVVAVNNLNMLVLAPGGVPGRLTLWTV 271
Query: 60 SAFKKLDALY 69
A +KL L+
Sbjct: 272 PAVEKLGGLF 281
>gi|46396651|sp|Q975I2.2|RL4_SULTO RecName: Full=50S ribosomal protein L4P
gi|342306189|dbj|BAK54278.1| 50S ribosomal protein L4P [Sulfolobus tokodaii str. 7]
Length = 266
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + +GPL V++ + KA NIPGV++I S L+++ LAPGGH GR I+T+
Sbjct: 191 MRGRRYKEPKGPLFVIHENNPVFVKAASNIPGVDVILASDLSVIHLAPGGHPGRLTIYTK 250
Query: 60 SAFKKL 65
S+ L
Sbjct: 251 SSIDVL 256
>gi|88603498|ref|YP_503676.1| 50S ribosomal protein L4 [Methanospirillum hungatei JF-1]
gi|109893603|sp|Q2FU92.1|RL4_METHJ RecName: Full=50S ribosomal protein L4P
gi|88188960|gb|ABD41957.1| LSU ribosomal protein L4P [Methanospirillum hungatei JF-1]
Length = 249
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V GK+R +A RN+ GV++ V LN+ LAPG H R +WTE
Sbjct: 183 LRGRRYKQRKSLLIVTGKER--LRAARNLAGVDVCLVDNLNVELLAPGTHSARLTLWTED 240
Query: 61 AFKKL 65
A +KL
Sbjct: 241 AVRKL 245
>gi|15920640|ref|NP_376309.1| 50S ribosomal protein L4P [Sulfolobus tokodaii str. 7]
Length = 269
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + +GPL V++ + KA NIPGV++I S L+++ LAPGGH GR I+T+
Sbjct: 194 MRGRRYKEPKGPLFVIHENNPVFVKAASNIPGVDVILASDLSVIHLAPGGHPGRLTIYTK 253
Query: 60 SAFKKL 65
S+ L
Sbjct: 254 SSIDVL 259
>gi|227830388|ref|YP_002832168.1| 50S ribosomal protein L4P [Sulfolobus islandicus L.S.2.15]
gi|259491572|sp|C3MQ60.1|RL4_SULIL RecName: Full=50S ribosomal protein L4P
gi|227456836|gb|ACP35523.1| Ribosomal protein L4/L1e [Sulfolobus islandicus L.S.2.15]
Length = 267
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGTHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>gi|18313002|ref|NP_559669.1| 50S ribosomal protein L4 [Pyrobaculum aerophilum str. IM2]
gi|46396650|sp|Q8ZW51.1|RL4_PYRAE RecName: Full=50S ribosomal protein L4P
gi|18160503|gb|AAL63851.1| ribosomal protein L4 [Pyrobaculum aerophilum str. IM2]
Length = 283
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV + L A RN PGV++++V+ LN+L LAPGG GR +WT
Sbjct: 213 MRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTA 272
Query: 60 SAFKKLDALY 69
A +KL L+
Sbjct: 273 PAVEKLRGLF 282
>gi|171185279|ref|YP_001794198.1| 50S ribosomal protein L4P [Pyrobaculum neutrophilum V24Sta]
gi|170934491|gb|ACB39752.1| ribosomal protein L4/L1e [Pyrobaculum neutrophilum V24Sta]
Length = 284
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
+VV D L A RN PGV+++ V LN+L LAPGG GR +WT A +KL LY
Sbjct: 227 VVVSSADVPLAAAVRNFPGVDVVPVDGLNMLVLAPGGAPGRLTLWTVPAVEKLRGLY 283
>gi|333911090|ref|YP_004484823.1| 50S ribosomal protein L4 [Methanotorris igneus Kol 5]
gi|333751679|gb|AEF96758.1| 50S ribosomal protein L4P [Methanotorris igneus Kol 5]
Length = 254
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + + LVV G KA RN+PGV++I+ ++ +APG GR +WTES
Sbjct: 184 MRGRKYRKPKSVLVVVGDKCNAIKASRNLPGVDVITADNFGVIHIAPGAMAGRLTLWTES 243
Query: 61 AFKKLDALY 69
A +KL +
Sbjct: 244 AIEKLSERF 252
>gi|193084316|gb|ACF09975.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 292
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + LVV GL KA RN+PGV+++ L+ LAPGG GR +WT++
Sbjct: 227 MRGRRYRTPKSILVVVSNRDGLHKAARNVPGVDVVVAKDLSAEDLAPGGDAGRLTVWTKA 286
Query: 61 AFKKLD 66
A + L+
Sbjct: 287 AIEALE 292
>gi|312285778|gb|ADQ64579.1| hypothetical protein [Bactrocera oleae]
Length = 244
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 31/36 (86%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLA 46
GPL+VY KD GL +AFRNIPG+E ++V K+NLLKLA
Sbjct: 209 GPLIVYYKDEGLRRAFRNIPGIETMNVDKMNLLKLA 244
>gi|227827692|ref|YP_002829472.1| 50S ribosomal protein L4P [Sulfolobus islandicus M.14.25]
gi|229584896|ref|YP_002843398.1| 50S ribosomal protein L4P [Sulfolobus islandicus M.16.27]
gi|238619863|ref|YP_002914689.1| 50S ribosomal protein L4P [Sulfolobus islandicus M.16.4]
gi|385773364|ref|YP_005645930.1| 50S ribosomal protein L4 [Sulfolobus islandicus HVE10/4]
gi|385776002|ref|YP_005648570.1| 50S ribosomal protein L4 [Sulfolobus islandicus REY15A]
gi|259491570|sp|C3N5S8.1|RL4_SULIA RecName: Full=50S ribosomal protein L4P
gi|259491571|sp|C4KHF7.1|RL4_SULIK RecName: Full=50S ribosomal protein L4P
gi|259491573|sp|C3MVH9.1|RL4_SULIM RecName: Full=50S ribosomal protein L4P
gi|227459488|gb|ACP38174.1| ribosomal protein L4/L1e [Sulfolobus islandicus M.14.25]
gi|228019946|gb|ACP55353.1| ribosomal protein L4/L1e [Sulfolobus islandicus M.16.27]
gi|238380933|gb|ACR42021.1| ribosomal protein L4/L1e [Sulfolobus islandicus M.16.4]
gi|323474750|gb|ADX85356.1| ribosomal protein L4/L1e [Sulfolobus islandicus REY15A]
gi|323477478|gb|ADX82716.1| ribosomal protein L4/L1e [Sulfolobus islandicus HVE10/4]
Length = 267
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>gi|193083755|gb|ACF09442.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 292
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + LVV GL KA RN+PGV+++ L+ LAPGG GR +WT++
Sbjct: 227 MRGRRYRTPKSILVVVSNRDGLHKAARNVPGVDVVVAKDLSAEDLAPGGDAGRLTVWTKA 286
Query: 61 AFKKLD 66
A + L+
Sbjct: 287 AVEALE 292
>gi|410722181|ref|ZP_11361490.1| 50S ribosomal protein L4P [Methanobacterium sp. Maddingley MBC34]
gi|410597417|gb|EKQ52036.1| 50S ribosomal protein L4P [Methanobacterium sp. Maddingley MBC34]
Length = 263
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ +GPL+V G+D+G++ RN PGV+++ V LN LAPG H GR ++T+SA
Sbjct: 194 RGRKYKTPKGPLLVVGEDKGISLGARNHPGVDVVVVDNLNAELLAPGTHPGRLTVYTKSA 253
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 254 IEKLGDLF 261
>gi|408381921|ref|ZP_11179468.1| 50S ribosomal protein L4P [Methanobacterium formicicum DSM 3637]
gi|407815369|gb|EKF85954.1| 50S ribosomal protein L4P [Methanobacterium formicicum DSM 3637]
Length = 261
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ +GPL+V G+D+G++ RN PGV+++ V LN LAPG H GR ++T+SA
Sbjct: 192 RGRKYKTPKGPLLVVGEDKGISLGARNHPGVDVVVVDNLNAELLAPGTHPGRLTVYTKSA 251
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 252 IEKLGDLF 259
>gi|374633067|ref|ZP_09705434.1| 50S ribosomal protein L4P [Metallosphaera yellowstonensis MK1]
gi|373524551|gb|EHP69428.1| 50S ribosomal protein L4P [Metallosphaera yellowstonensis MK1]
Length = 264
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGL--TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWT 58
MR RR + GPL+V DR L +A N+PGV+++ ++++ LAPGGH GR I+T
Sbjct: 189 MRGRRYKKTVGPLIVV-HDRKLPIIEAASNLPGVDVVYAGDVSVIHLAPGGHPGRLTIFT 247
Query: 59 ESAFKKLDALYG 70
ES+ LD G
Sbjct: 248 ESSLDILDKRLG 259
>gi|291333645|gb|ADD93336.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 66
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + L+V + GL K RN+PGV++++ L+ LAPGG +GR +WT+S
Sbjct: 1 MRGRKYRTPKSILLVVAQKGGLDKGARNLPGVDVVTAKDLSAEDLAPGGDMGRLTVWTKS 60
Query: 61 AFKKLD 66
A + L+
Sbjct: 61 AVEALE 66
>gi|15897622|ref|NP_342227.1| 50S ribosomal protein L4P [Sulfolobus solfataricus P2]
gi|284174947|ref|ZP_06388916.1| 50S ribosomal protein L4P [Sulfolobus solfataricus 98/2]
gi|384434236|ref|YP_005643594.1| 50S ribosomal protein L4P [Sulfolobus solfataricus 98/2]
gi|11134368|sp|Q9UXA6.1|RL4_SULSO RecName: Full=50S ribosomal protein L4P
gi|6015759|emb|CAB57586.1| ribosomal protein L4 (HMAL4) [Sulfolobus solfataricus P2]
gi|13813887|gb|AAK41017.1| LSU ribosomal protein L4AE (rpl4AE) [Sulfolobus solfataricus P2]
gi|261602390|gb|ACX91993.1| 50S ribosomal protein L4P [Sulfolobus solfataricus 98/2]
Length = 267
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RN+ GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251
Query: 60 SAFKKLD 66
S+ K LD
Sbjct: 252 SSIKILD 258
>gi|47079405|gb|AAT10148.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 304
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + L+V + GL KA RNIPGV+++ L+ LAPGG GR +WT++
Sbjct: 239 MRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKA 298
Query: 61 AFKKLD 66
A L+
Sbjct: 299 AIGALE 304
>gi|345005654|ref|YP_004808507.1| 50S ribosomal protein L4P [halophilic archaeon DL31]
gi|344321280|gb|AEN06134.1| 50S ribosomal protein L4P [halophilic archaeon DL31]
Length = 248
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ Q + LVV ++ L++A RN+ GV++ + S++N LAPG H GR +WTES
Sbjct: 183 LRGRKYKQPKSVLVVTSEE--LSRAARNLAGVDVTTASEVNAEDLAPGTHAGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AVEEV 245
>gi|330835824|ref|YP_004410552.1| 50S ribosomal protein L4P [Metallosphaera cuprina Ar-4]
gi|329567963|gb|AEB96068.1| 50S ribosomal protein L4P [Metallosphaera cuprina Ar-4]
Length = 263
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL VV+ + KA N+PGV+++S ++++ LAPGGH GR VI+TE
Sbjct: 189 MRGRKYKRTVGPLLVVHDYSLPVVKAALNLPGVDIVSAKDVSVIHLAPGGHPGRLVIYTE 248
Query: 60 SAFKKL 65
S+ L
Sbjct: 249 SSINIL 254
>gi|268323276|emb|CBH36864.1| 50S ribosomal protein L4P [uncultured archaeon]
Length = 268
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG------------LTKAFRNIPGVELISVSKLNLLKLAPG 48
MR RR ++ L+V D G + K N+PGV++ VSKLN APG
Sbjct: 188 MRGRRYKTKKSILIVISGDEGTVESEHPSRDKRILKGAENLPGVDISYVSKLNAELFAPG 247
Query: 49 GHVGRFVIWTESAFKKLDAL 68
H GR IWTES+ KL A+
Sbjct: 248 THPGRLTIWTESSINKLAAM 267
>gi|170516813|gb|ACB15215.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 292
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + L+V GL KA RN+PGV+ + L+ LAPGG GR +WT++
Sbjct: 227 MRGRRYRTPKSILLVVSNRDGLHKAARNVPGVDAVVTKDLSAEDLAPGGDSGRLTVWTKA 286
Query: 61 AFKKLD 66
A ++L+
Sbjct: 287 AIEELE 292
>gi|327311644|ref|YP_004338541.1| 50S ribosomal protein L4P [Thermoproteus uzoniensis 768-20]
gi|326948123|gb|AEA13229.1| 50S ribosomal protein L4P [Thermoproteus uzoniensis 768-20]
Length = 286
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV D L +A RN+PGV++ V L++L LAPGG GR +WT+
Sbjct: 216 MRGRRYKEPKSLLVVVSSPDAPLVRAARNLPGVDVAYVKSLSVLHLAPGGVPGRLTLWTQ 275
Query: 60 SAFKKLDALY 69
+ + L LY
Sbjct: 276 QSIEALRGLY 285
>gi|13541156|ref|NP_110844.1| 50S ribosomal protein L4P [Thermoplasma volcanium GSS1]
gi|46396652|sp|Q97BX6.1|RL4_THEVO RecName: Full=50S ribosomal protein L4P
gi|14324544|dbj|BAB59471.1| ribosomal protein large subunit L4 [Thermoplasma volcanium GSS1]
Length = 255
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + L+V G D K F+++PGV++ S+ L++ KLAPGG GR ++TES
Sbjct: 187 MRNRRYKVPKSLLIV-GTDSVSLKVFKSLPGVDVASMDSLSIRKLAPGGVGGRLTVYTES 245
Query: 61 AFKKL 65
A +KL
Sbjct: 246 AIEKL 250
>gi|432328990|ref|YP_007247134.1| 50S ribosomal protein L4P [Aciduliprofundum sp. MAR08-339]
gi|432135699|gb|AGB04968.1| 50S ribosomal protein L4P [Aciduliprofundum sp. MAR08-339]
Length = 254
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L+V + K FRN+PGV++++ +LN LAPG H GR I+TESA K++
Sbjct: 197 LIVVSNKENVEKGFRNLPGVDVVTPRELNAEVLAPGTHAGRLTIFTESAIKEI 249
>gi|333987678|ref|YP_004520285.1| 50S ribosomal protein L4P [Methanobacterium sp. SWAN-1]
gi|333825822|gb|AEG18484.1| 50S ribosomal protein L4P [Methanobacterium sp. SWAN-1]
Length = 261
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ +GPLVV G+D+G++ RN GV+++ V LN LAPG H GR I+T+SA
Sbjct: 192 RGRKYKNPKGPLVVVGEDKGISLGARNHAGVDVVVVDNLNAELLAPGTHPGRLTIYTKSA 251
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 252 VEKLGELF 259
>gi|289597192|ref|YP_003483888.1| 50S ribosomal protein L4P [Aciduliprofundum boonei T469]
gi|289534979|gb|ADD09326.1| 50S ribosomal protein L4P [Aciduliprofundum boonei T469]
Length = 254
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+VV KD L K FRN+PGV++++ +LN LAPG H GR I+TESA K++
Sbjct: 198 IVVSNKDNVL-KGFRNLPGVDIVTPRELNAEVLAPGTHAGRLAIFTESAIKEI 249
>gi|119873282|ref|YP_931289.1| 50S ribosomal protein L4 [Pyrobaculum islandicum DSM 4184]
gi|119674690|gb|ABL88946.1| LSU ribosomal protein L4P [Pyrobaculum islandicum DSM 4184]
Length = 281
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 22 LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
L A RN PGV+++SV LN+L LAPGG GR +WT +A +KL L+
Sbjct: 233 LAFAVRNFPGVDVVSVDNLNMLVLAPGGVPGRLTLWTTTAIEKLRGLF 280
>gi|379003040|ref|YP_005258712.1| 50S ribosomal protein L4P [Pyrobaculum oguniense TE7]
gi|375158493|gb|AFA38105.1| 50S ribosomal protein L4P [Pyrobaculum oguniense TE7]
Length = 282
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV D L A RN PGV+++ LN+L LAPG GR +WT
Sbjct: 212 MRGRRYKEPKSVLVVVSAVDAPLAAAVRNFPGVDVVPAEHLNMLVLAPGAVPGRLTLWTA 271
Query: 60 SAFKKLDALY 69
A +KL L+
Sbjct: 272 PAVEKLRGLF 281
>gi|226471654|emb|CAX70908.1| putative ribosomal protein L4 [Schistosoma japonicum]
Length = 232
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPG 31
MRNRRRIQ+RGP+++Y KD G+++AFRNIPG
Sbjct: 196 MRNRRRIQKRGPIIIYKKDDGISRAFRNIPG 226
>gi|254168596|ref|ZP_04875439.1| ribosomal protein L4/L1 family [Aciduliprofundum boonei T469]
gi|197622430|gb|EDY35002.1| ribosomal protein L4/L1 family [Aciduliprofundum boonei T469]
Length = 254
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+VV KD L K FRN+PGV++++ +LN LAPG H GR I+TESA K++
Sbjct: 198 IVVSNKDNVL-KGFRNLPGVDIVTPRELNAEVLAPGTHAGRLAIFTESAIKEI 249
>gi|294496016|ref|YP_003542509.1| 50S ribosomal protein L4P [Methanohalophilus mahii DSM 5219]
gi|292667015|gb|ADE36864.1| LSU ribosomal protein L4P [Methanohalophilus mahii DSM 5219]
Length = 253
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ ++ L+V G + + ++ RN+ GV++ +V L LAPG GR +WTES
Sbjct: 184 MRGRKYKHKKSVLIVAGSESPIFRSARNLSGVDVTTVDSLYTELLAPGAKAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A L+ ++
Sbjct: 244 AISSLEDMF 252
>gi|448377807|ref|ZP_21560503.1| 50S ribosomal protein L4P [Halovivax asiaticus JCM 14624]
gi|445655751|gb|ELZ08596.1| 50S ribosomal protein L4P [Halovivax asiaticus JCM 14624]
Length = 250
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V G + G ++A RN+ G ++ + +++N LAPG H GR +WTE+
Sbjct: 183 TRGRKYKQPKSILFVTGSEAGPSRAARNLAGADVATAAEVNAEDLAPGAHPGRLTVWTEA 242
Query: 61 AFKKL 65
A ++
Sbjct: 243 ALAEV 247
>gi|193084206|gb|ACF09870.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 292
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
L+V G+ GL KA N+ GV++++ L+ LAPGG +GR +WT+SA + L+
Sbjct: 239 LLVVGQRDGLAKAASNVSGVDVVAAKDLSAEDLAPGGDMGRLTVWTKSAIEALE 292
>gi|358331879|dbj|GAA50642.1| large subunit ribosomal protein L4e [Clonorchis sinensis]
Length = 407
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGV-------ELISVSKLNLLKLA-PGGHVG 52
MRNRRRIQ+RGP++++ KD G+T+AFRNIP + E+ SV K L L PG V
Sbjct: 280 MRNRRRIQKRGPIIIFRKDDGITRAFRNIPDLGRLLHCREVTSVLKPRRLHLQRPGPKVK 339
Query: 53 RFVIWTESAFKKLD 66
+ + A KL+
Sbjct: 340 KNPLKNIQALLKLN 353
>gi|325969278|ref|YP_004245470.1| 50S ribosomal protein L4P [Vulcanisaeta moutnovskia 768-28]
gi|323708481|gb|ADY01968.1| 50S ribosomal protein L4P [Vulcanisaeta moutnovskia 768-28]
Length = 278
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + L VV D + K RN+PGV+++ V L +L LAPGG GR +WT
Sbjct: 206 MRGRRYKEGKSLLIVVSSTDASIIKVARNLPGVDVVPVRNLGVLYLAPGGVPGRLTLWTS 265
Query: 60 SAFKKL 65
SA ++L
Sbjct: 266 SAIEEL 271
>gi|207346857|gb|EDZ73223.1| YDR012Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 232
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISV 37
RNRR QRRGPLVVY +D G+ KA RN+PGVE ++
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETATL 230
>gi|70606411|ref|YP_255281.1| 50S ribosomal protein L4P [Sulfolobus acidocaldarius DSM 639]
gi|449066623|ref|YP_007433705.1| 50S ribosomal protein L4P [Sulfolobus acidocaldarius N8]
gi|449068897|ref|YP_007435978.1| 50S ribosomal protein L4P [Sulfolobus acidocaldarius Ron12/I]
gi|76363365|sp|Q4JB41.1|RL4_SULAC RecName: Full=50S ribosomal protein L4P
gi|68567059|gb|AAY79988.1| 50S ribosomal protein L4E [Sulfolobus acidocaldarius DSM 639]
gi|449035131|gb|AGE70557.1| 50S ribosomal protein L4P [Sulfolobus acidocaldarius N8]
gi|449037405|gb|AGE72830.1| 50S ribosomal protein L4P [Sulfolobus acidocaldarius Ron12/I]
Length = 266
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR +GPL+V + + ++ NIPGV ++S + ++++ LAPGGH GR I+T+
Sbjct: 191 MRGRRYQIAKGPLIVVSNHKSPVVESASNIPGVNVVSANLVSVIHLAPGGHPGRLTIYTK 250
Query: 60 SAFKKL 65
S+ L
Sbjct: 251 SSINIL 256
>gi|289919138|gb|ADD21621.1| ribosomal protein L4 [Mya truncata]
Length = 172
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 35/38 (92%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKL 45
QRRGPL++Y +D GLT+AFRNIPG+ L++V++LNL+K+
Sbjct: 135 QRRGPLIIYNQDNGLTRAFRNIPGITLLNVARLNLVKV 172
>gi|159040902|ref|YP_001540154.1| 50S ribosomal protein L4P [Caldivirga maquilingensis IC-167]
gi|157919737|gb|ABW01164.1| ribosomal protein L4/L1e [Caldivirga maquilingensis IC-167]
Length = 278
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPLVVYG-KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV KD + +A RN+ GV+++ V L++L LAPGG GR +WT+
Sbjct: 203 MRGRRYKEPKSILVVVSRKDAPVIRAVRNMAGVDVVYVDNLSILHLAPGGVPGRLTLWTQ 262
Query: 60 SAFKKL 65
A ++L
Sbjct: 263 GAIERL 268
>gi|126465914|ref|YP_001041023.1| 50S ribosomal protein L4 [Staphylothermus marinus F1]
gi|126014737|gb|ABN70115.1| LSU ribosomal protein L4P [Staphylothermus marinus F1]
Length = 271
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR ++ R L VV D+ KA RN PGV++ + + L +L LAPGG GR ++T
Sbjct: 197 MRGRRYVEPRSILFVVTSYDKPFAKAVRNFPGVDVATPNNLGILHLAPGGVPGRLTVFTR 256
Query: 60 SAFKKLDALY 69
SA + + Y
Sbjct: 257 SAIEDISRKY 266
>gi|154150076|ref|YP_001403694.1| 50S ribosomal protein L4 [Methanoregula boonei 6A8]
gi|166234683|sp|A7I5P0.1|RL4_METB6 RecName: Full=50S ribosomal protein L4P
gi|153998628|gb|ABS55051.1| ribosomal protein L4/L1e [Methanoregula boonei 6A8]
Length = 248
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V +A RN+ GV++++V +LN+ LAPG GR +WTES
Sbjct: 183 LRGRRYKQRKSLLIVTSGPE--FRAARNLAGVDVVTVDQLNVEHLAPGMQAGRLTVWTES 240
Query: 61 AFKKLD 66
A +L+
Sbjct: 241 AVIRLE 246
>gi|300710376|ref|YP_003736190.1| 50S ribosomal protein L4P [Halalkalicoccus jeotgali B3]
gi|448294700|ref|ZP_21484779.1| 50S ribosomal protein L4P [Halalkalicoccus jeotgali B3]
gi|299124059|gb|ADJ14398.1| 50S ribosomal protein L4P [Halalkalicoccus jeotgali B3]
gi|445586377|gb|ELY40659.1| 50S ribosomal protein L4P [Halalkalicoccus jeotgali B3]
Length = 250
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G +KA RN+ GV++ + +++ LAPG H GR +WTES
Sbjct: 183 TRGRKYKQPKSILFVTSSEAGPSKAARNLAGVDVATAREVSAEDLAPGTHAGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 AIEEV 247
>gi|16082269|ref|NP_394727.1| 50S ribosomal protein L4P [Thermoplasma acidophilum DSM 1728]
gi|46396656|sp|Q9HIR0.1|RL4_THEAC RecName: Full=50S ribosomal protein L4P
gi|10640616|emb|CAC12394.1| probable 50S ribosomal protein L4 [Thermoplasma acidophilum]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR Q + L+V ++ KAFR++PGV++ S + L++ KLAPGG GR I+TE
Sbjct: 187 MRGRRYKQPKSVLIV-ARNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTEG 245
Query: 61 AFKKL 65
A + L
Sbjct: 246 AIESL 250
>gi|296109264|ref|YP_003616213.1| 50S ribosomal protein L4P [methanocaldococcus infernus ME]
gi|295434078|gb|ADG13249.1| 50S ribosomal protein L4P [Methanocaldococcus infernus ME]
Length = 249
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 25 AFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
A RN+PGV++I+V L +L LAPGG GR +WTE A +KL
Sbjct: 205 ASRNLPGVDVITVKDLGILHLAPGGVAGRLTLWTEGALEKL 245
>gi|45359107|ref|NP_988664.1| 50S ribosomal protein L4P [Methanococcus maripaludis S2]
gi|340624856|ref|YP_004743309.1| 50S ribosomal protein L4P [Methanococcus maripaludis X1]
gi|46396576|sp|P60846.1|RL4_METMP RecName: Full=50S ribosomal protein L4P
gi|45047982|emb|CAF31100.1| LSU Ribosomal protein L4P [Methanococcus maripaludis S2]
gi|339905124|gb|AEK20566.1| 50S ribosomal protein L4P [Methanococcus maripaludis X1]
Length = 252
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ I+ + LVV G A RN+ GV++I+ + L+ + +APG GR +WTE+
Sbjct: 184 LRGRKYIKPKSVLVVVGDACEAITASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTEN 243
Query: 61 AFKKLDALY 69
A +K++ +
Sbjct: 244 AIEKINGRF 252
>gi|159905510|ref|YP_001549172.1| 50S ribosomal protein L4P [Methanococcus maripaludis C6]
gi|226730689|sp|A9A9B7.1|RL4_METM6 RecName: Full=50S ribosomal protein L4P
gi|159887003|gb|ABX01940.1| ribosomal protein L4/L1e [Methanococcus maripaludis C6]
Length = 252
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + + LVV G A RN+ GV++I+ + L+ + +APG GR +WTES
Sbjct: 184 LRGRKYKKPKSVLVVVGDACDAVAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTES 243
Query: 61 AFKKLDALY 69
A +KL+ +
Sbjct: 244 AIEKLNGRF 252
>gi|374630589|ref|ZP_09702974.1| 50S ribosomal protein L4P [Methanoplanus limicola DSM 2279]
gi|373908702|gb|EHQ36806.1| 50S ribosomal protein L4P [Methanoplanus limicola DSM 2279]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V + +A N+ GV+ +SV++LN LAPG H GR +WT
Sbjct: 183 LRGRRYKQRKSLLIVTSEKP--HQAAANLAGVDAVSVNQLNAELLAPGTHAGRLTVWTVG 240
Query: 61 AFKKLD 66
A KKL+
Sbjct: 241 ALKKLE 246
>gi|448311979|ref|ZP_21501732.1| 50S ribosomal protein L4P [Natronolimnobius innermongolicus JCM
12255]
gi|445603600|gb|ELY57562.1| 50S ribosomal protein L4P [Natronolimnobius innermongolicus JCM
12255]
Length = 250
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG GR +WTES
Sbjct: 183 TRGRKYKQPKSILFVTSSESGPSRAARNLAGADVTTAAEVNAEDLAPGAQAGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 ALEEV 247
>gi|385805566|ref|YP_005841964.1| 50S ribosomal protein L4P [Fervidicoccus fontis Kam940]
gi|383795429|gb|AFH42512.1| 50S ribosomal protein L4P [Fervidicoccus fontis Kam940]
Length = 272
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR I+ + L V + KA RN+PGV+++S L++L LAPGG GR I+T+
Sbjct: 195 MRGRRYIEPKSLLFVLSSINTPFAKAVRNLPGVDVVSADNLSILHLAPGGVPGRLTIYTK 254
Query: 60 SAFKKLDALY 69
+ KL +
Sbjct: 255 DSLLKLQERF 264
>gi|297527409|ref|YP_003669433.1| 50S ribosomal protein L4P [Staphylothermus hellenicus DSM 12710]
gi|297256325|gb|ADI32534.1| 50S ribosomal protein L4P [Staphylothermus hellenicus DSM 12710]
Length = 271
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR ++ R L VV ++ KA RN PGV++ + + L +L LAPGG GR ++T
Sbjct: 197 MRGRRYVEPRSILFVVTSYNKPFAKAVRNFPGVDVATPNNLGILHLAPGGVPGRLTVFTR 256
Query: 60 SAFKKLDALY 69
SA + + + Y
Sbjct: 257 SALEDISSKY 266
>gi|150401235|ref|YP_001325001.1| 50S ribosomal protein L4 [Methanococcus aeolicus Nankai-3]
gi|226730685|sp|A6UV67.1|RL4_META3 RecName: Full=50S ribosomal protein L4P
gi|150013938|gb|ABR56389.1| ribosomal protein L4/L1e [Methanococcus aeolicus Nankai-3]
Length = 252
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + + LVV KA +N+PGV++IS + L ++ +APG GR +WTES
Sbjct: 184 LRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLWTES 243
Query: 61 AFKKLDALY 69
A ++++ +
Sbjct: 244 AVEEINKRF 252
>gi|444714754|gb|ELW55631.1| 60S ribosomal protein L4 [Tupaia chinensis]
Length = 199
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFV 55
MRNR RIQ RGP ++Y +D G+ KAFRN G+ L+++ +L ++ + R +
Sbjct: 8 MRNRHRIQCRGPCIIYNEDNGIIKAFRNTAGLTLLNMMNTDLSRILKSPEIQRAL 62
>gi|336121493|ref|YP_004576268.1| 50S ribosomal protein L4P [Methanothermococcus okinawensis IH1]
gi|334856014|gb|AEH06490.1| 50S ribosomal protein L4P [Methanothermococcus okinawensis IH1]
Length = 256
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + + LVV KA +N+PGV++I+ L ++ +APG GR +WTE
Sbjct: 188 LRGRKYRKPKSVLVVVSSLCDAVKASKNLPGVDVITADDLGVMHIAPGADAGRLTLWTEK 247
Query: 61 AFKKLDALY 69
A +KL+ +
Sbjct: 248 AVEKLNERF 256
>gi|48477713|ref|YP_023419.1| 50S ribosomal protein L4P [Picrophilus torridus DSM 9790]
gi|48430361|gb|AAT43226.1| large subunit ribosomal protein L1E [Picrophilus torridus DSM 9790]
Length = 254
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR Q + L+V G KAF ++PGV++ + S L++ KLAPGG GR I+TES
Sbjct: 187 MRNRTYKQPKSLLIV-GTSYDNLKAFSSLPGVDIATPSSLSIRKLAPGGTGGRLTIFTES 245
Query: 61 AFKKL 65
A L
Sbjct: 246 AISSL 250
>gi|257076560|ref|ZP_05570921.1| 50S ribosomal protein L4P [Ferroplasma acidarmanus fer1]
Length = 256
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNR Q + L+V L +AF ++PGV+L S++ L++ KLAPGG+ GR I+T S
Sbjct: 189 MRNRTYKQPKSLLIVGSSVESL-RAFASLPGVDLASLNSLSITKLAPGGNPGRLTIYTAS 247
Query: 61 AFKKL 65
+ L
Sbjct: 248 TIENL 252
>gi|150399608|ref|YP_001323375.1| 50S ribosomal protein L4P [Methanococcus vannielii SB]
gi|226730695|sp|A6UQJ1.1|RL4_METVS RecName: Full=50S ribosomal protein L4P
gi|150012311|gb|ABR54763.1| ribosomal protein L4/L1e [Methanococcus vannielii SB]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + R LVV G A RN+ GV++I+ + L+ + +APG GR +WTE+
Sbjct: 184 LRGRKYKKPRSVLVVVGDACDAVAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTEN 243
Query: 61 AFKKL 65
A +KL
Sbjct: 244 AIEKL 248
>gi|77024939|gb|ABA61366.1| ribosomal protein L4 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 287
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
LVV +D L KA RN+PGV+++ L LAPGG GR +WT++A + L+
Sbjct: 235 LVVAQRD-ALAKAARNVPGVDVVVAKDLCAEDLAPGGDAGRLTVWTKAAIEALE 287
>gi|352682916|ref|YP_004893440.1| putative secreted protein [Thermoproteus tenax Kra 1]
gi|350275715|emb|CCC82362.1| putative secreted protein [Thermoproteus tenax Kra 1]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 1 MRNRR-RIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR ++ + +VV D L +A RN+PGV+++ V L++L LAPGG GR +WT
Sbjct: 213 MRGRRYKVPKSLLIVVSRPDVPLIRATRNMPGVDVVYVKNLSVLHLAPGGVPGRLTLWTL 272
Query: 60 SAFKKLDALY 69
+ + L L+
Sbjct: 273 PSLETLRGLF 282
>gi|448315113|ref|ZP_21504766.1| 50S ribosomal protein L4P [Natronococcus jeotgali DSM 18795]
gi|445612372|gb|ELY66098.1| 50S ribosomal protein L4P [Natronococcus jeotgali DSM 18795]
Length = 250
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG GR +WTES
Sbjct: 183 TRGRKYKQPKSILFVTASETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 ALEEV 247
>gi|359416217|ref|ZP_09208569.1| 50S ribosomal protein L4P [Candidatus Haloredivivus sp. G17]
gi|358033420|gb|EHK01973.1| 50S ribosomal protein L4P [Candidatus Haloredivivus sp. G17]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
PLVV KD G+ +A N+ GVE+ V +LN KL+ G GR V+W+E + ++++
Sbjct: 192 PLVVVAKDDGILQASGNLAGVEVSLVDQLNAEKLSMGARPGRLVVWSEKSLEEMN 246
>gi|307595042|ref|YP_003901359.1| 50S ribosomal protein L4P [Vulcanisaeta distributa DSM 14429]
gi|307550243|gb|ADN50308.1| 50S ribosomal protein L4P [Vulcanisaeta distributa DSM 14429]
Length = 278
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + L+V D + K RN+PGV+ + V L++L LAPGG GR +WT
Sbjct: 206 MRGRRYKEGKSLLIVVSTVDAPVIKVARNLPGVDAVPVRNLSVLYLAPGGVPGRLTVWTL 265
Query: 60 SAFKKL 65
SA ++L
Sbjct: 266 SAIEEL 271
>gi|435848747|ref|YP_007310997.1| 50S ribosomal protein L4P [Natronococcus occultus SP4]
gi|433675015|gb|AGB39207.1| 50S ribosomal protein L4P [Natronococcus occultus SP4]
Length = 250
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG GR +WTES
Sbjct: 183 TRGRKYKQPKSILFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 ALEEV 247
>gi|134045078|ref|YP_001096564.1| 50S ribosomal protein L4P [Methanococcus maripaludis C5]
gi|226730688|sp|A4FVY1.1|RL4_METM5 RecName: Full=50S ribosomal protein L4P
gi|132662703|gb|ABO34349.1| LSU ribosomal protein L4P [Methanococcus maripaludis C5]
Length = 252
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + R LVV G A RN+ GV++I+ + L+ + +APG GR +WTE+
Sbjct: 184 LRGRKYKKPRSVLVVVGDACEAIAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTEN 243
Query: 61 AFKKLDALY 69
A +K++ +
Sbjct: 244 AIEKINGRF 252
>gi|433638932|ref|YP_007284692.1| 50S ribosomal protein L4P [Halovivax ruber XH-70]
gi|433290736|gb|AGB16559.1| 50S ribosomal protein L4P [Halovivax ruber XH-70]
Length = 250
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG H GR +WTE+
Sbjct: 183 TRGRKYKQPKSILFVTSSEAGPSRAARNLAGADVATAAEVNAEDLAPGTHPGRLTVWTEA 242
Query: 61 AFKKL 65
A ++
Sbjct: 243 ALAEV 247
>gi|20093852|ref|NP_613699.1| 50S ribosomal protein L4 [Methanopyrus kandleri AV19]
gi|46396647|sp|Q8TY91.1|RL4_METKA RecName: Full=50S ribosomal protein L4P
gi|19886781|gb|AAM01629.1| Ribosomal protein L4 [Methanopyrus kandleri AV19]
Length = 260
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R RR ++ + L+V +D G+ RN PGV+++ L + LAPG H GR ++T A
Sbjct: 191 RGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTVFTPGA 250
Query: 62 FKKLDALYGS 71
+ L+ G
Sbjct: 251 LEVLEERLGE 260
>gi|324542405|gb|ADY49645.1| 60S ribosomal protein L4, partial [Ascaris suum]
Length = 134
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 51 VGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
+GR +IWTESAF+KLD +YG+ K+ K +++P+ KM N
Sbjct: 1 MGRLIIWTESAFRKLDLIYGTEVRKSVAKASFTMPRAKMCN 41
>gi|269866520|ref|XP_002652302.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220062780|gb|EED41754.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 244
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGH 50
R RR +R G L+V+ D AF NI GVEL +V+ LNLL+L PGGH
Sbjct: 192 FRGRRYSKRTGLLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPGGH 239
>gi|448298466|ref|ZP_21488495.1| 50S ribosomal protein L4P [Natronorubrum tibetense GA33]
gi|445591662|gb|ELY45863.1| 50S ribosomal protein L4P [Natronorubrum tibetense GA33]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N +LAPG GR +WTESA +++
Sbjct: 195 LFVTASESGPSRAARNLAGADVTTAAEVNAEELAPGAQPGRLTVWTESALEEV 247
>gi|448302867|ref|ZP_21492817.1| 50S ribosomal protein L4P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593874|gb|ELY48041.1| 50S ribosomal protein L4P [Natronorubrum sulfidifaciens JCM 14089]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ GV++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSESGPSRAARNLAGVDVTTAAEVNAEDLAPGTQPGRLTVWTESALEEV 247
>gi|448323162|ref|ZP_21512626.1| 50S ribosomal protein L4P [Natronococcus amylolyticus DSM 10524]
gi|445600348|gb|ELY54361.1| 50S ribosomal protein L4P [Natronococcus amylolyticus DSM 10524]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG GR +WTES
Sbjct: 183 TRGRKYKQPKSILFVTSSESGPSRAARNLAGADVTTAAEVNAEDLAPGTQPGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 ALEEV 247
>gi|297619638|ref|YP_003707743.1| 50S ribosomal protein L4P [Methanococcus voltae A3]
gi|297378615|gb|ADI36770.1| 50S ribosomal protein L4P [Methanococcus voltae A3]
Length = 253
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + R LVV K KA +NI GV++I+ L + +APG GR +WTE
Sbjct: 184 LRGRKYKKPRSVLVVVSKACDAVKASKNIAGVDVITADDLGTMHIAPGTAAGRLTLWTEG 243
Query: 61 AFKKL 65
A + L
Sbjct: 244 AIEAL 248
>gi|389860648|ref|YP_006362888.1| 50S ribosomal protein L4P [Thermogladius cellulolyticus 1633]
gi|388525552|gb|AFK50750.1| 50S ribosomal protein L4P [Thermogladius cellulolyticus 1633]
Length = 254
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR ++ + L VV ++ KA RN+PGV++ + L++L LAPGG GR ++T+
Sbjct: 180 MRGRRYVEPKSILFVVSSTEKLFAKAVRNLPGVDVATPKDLSVLHLAPGGVPGRLTVFTK 239
Query: 60 SAFKKL 65
SA +++
Sbjct: 240 SALEEI 245
>gi|429190343|ref|YP_007176021.1| 50S ribosomal protein L4P [Natronobacterium gregoryi SP2]
gi|448326255|ref|ZP_21515622.1| 50S ribosomal protein L4P [Natronobacterium gregoryi SP2]
gi|429134561|gb|AFZ71572.1| 50S ribosomal protein L4P [Natronobacterium gregoryi SP2]
gi|445612912|gb|ELY66629.1| 50S ribosomal protein L4P [Natronobacterium gregoryi SP2]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + L V + G ++A RN+ G ++ + +++N LAPG GR +WTES
Sbjct: 183 TRGRKYKQPKSLLFVTTSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 ALEEV 247
>gi|222480856|ref|YP_002567093.1| 50S ribosomal protein L4P [Halorubrum lacusprofundi ATCC 49239]
gi|254803738|sp|B9LSS6.1|RL4_HALLT RecName: Full=50S ribosomal protein L4P
gi|222453758|gb|ACM58023.1| ribosomal protein L4/L1e [Halorubrum lacusprofundi ATCC 49239]
Length = 248
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTES
Sbjct: 183 TRGRKYSQPKSVLVVTSEE--PSRAARNLSGVDVATAREVNAEDLAPGAHPGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AIEEV 245
>gi|124484911|ref|YP_001029527.1| 50S ribosomal protein L4P [Methanocorpusculum labreanum Z]
gi|124362452|gb|ABN06260.1| LSU ribosomal protein L4P [Methanocorpusculum labreanum Z]
Length = 247
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + L+V G A NI GV+ +SV+ LN+ LAPG GR +WTE+A
Sbjct: 184 RGRKYKQAKSALIVTS---GEFLAGANIAGVDCVSVNALNINVLAPGADAGRLTVWTEAA 240
Query: 62 FKKL 65
KK
Sbjct: 241 IKKF 244
>gi|448489441|ref|ZP_21607664.1| 50S ribosomal protein L4P [Halorubrum californiensis DSM 19288]
gi|445694813|gb|ELZ46931.1| 50S ribosomal protein L4P [Halorubrum californiensis DSM 19288]
Length = 248
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATADEVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
+++
Sbjct: 242 VEEV 245
>gi|448460076|ref|ZP_21596996.1| 50S ribosomal protein L4P [Halorubrum lipolyticum DSM 21995]
gi|445807794|gb|EMA57875.1| 50S ribosomal protein L4P [Halorubrum lipolyticum DSM 21995]
Length = 248
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTES
Sbjct: 183 TRGRKYSQPKSVLVVTSEE--PSRAARNLSGVDVATAREVNAEDLAPGAHPGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AVEEV 245
>gi|374724265|gb|EHR76345.1| Ribosomal protein L4 [uncultured marine group II euryarchaeote]
Length = 293
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R + L+V + GL +A RN+PGV++++ L LAPGG +GR ++T+
Sbjct: 228 MRGRVHKTPKSVLLVVKEKSGLAQAARNLPGVDVVAARDLCAEDLAPGGDIGRLTVFTKD 287
Query: 61 AFKKLD 66
A + L+
Sbjct: 288 AVEALN 293
>gi|448463231|ref|ZP_21598009.1| 50S ribosomal protein L4P [Halorubrum kocurii JCM 14978]
gi|445817226|gb|EMA67102.1| 50S ribosomal protein L4P [Halorubrum kocurii JCM 14978]
Length = 248
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTES
Sbjct: 183 TRGRKYSQPKSVLVVTSEE--PSRAARNLSGVDVATAREVNAEDLAPGAHPGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AVEEV 245
>gi|354610536|ref|ZP_09028492.1| 50S ribosomal protein L4P [Halobacterium sp. DL1]
gi|353195356|gb|EHB60858.1| 50S ribosomal protein L4P [Halobacterium sp. DL1]
Length = 250
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
LVV + G +KA RN+ GV++ + ++N LAPG GR +WTESA +++
Sbjct: 195 LVVTSSESGPSKAARNLAGVDVATGREVNTEDLAPGTDPGRLTLWTESALEEV 247
>gi|448338133|ref|ZP_21527185.1| 50S ribosomal protein L4P [Natrinema pallidum DSM 3751]
gi|445623308|gb|ELY76730.1| 50S ribosomal protein L4P [Natrinema pallidum DSM 3751]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448441448|ref|ZP_21589111.1| 50S ribosomal protein L4P [Halorubrum saccharovorum DSM 1137]
gi|445688857|gb|ELZ41104.1| 50S ribosomal protein L4P [Halorubrum saccharovorum DSM 1137]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTES
Sbjct: 183 TRGRKYSQPKSVLVVTSEE--PSRAARNLSGVDVATAREVNAEDLAPGAHPGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AVEEV 245
>gi|150402716|ref|YP_001330010.1| 50S ribosomal protein L4P [Methanococcus maripaludis C7]
gi|226730690|sp|A6VHD3.1|RL4_METM7 RecName: Full=50S ribosomal protein L4P
gi|150033746|gb|ABR65859.1| ribosomal protein L4/L1e [Methanococcus maripaludis C7]
Length = 252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + + LVV G A RN+ GV++I+ + L+ + +APG GR +WTE+
Sbjct: 184 LRGRKYKKPKSVLVVVGDACEAIAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTEN 243
Query: 61 AFKKLDALY 69
A +K++ +
Sbjct: 244 AIEKINGRF 252
>gi|76803058|ref|YP_331153.1| 50S ribosomal protein L4P [Natronomonas pharaonis DSM 2160]
gi|109893609|sp|Q3IMY7.1|RL4_NATPD RecName: Full=50S ribosomal protein L4P
gi|76558923|emb|CAI50519.1| 50S ribosomal protein L4 [Natronomonas pharaonis DSM 2160]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ + + LVV D+ L A RN+ G ++ + ++N+ LAPG GR +WTES
Sbjct: 183 TRGRKYTEPKSVLVVTSDDQSL--AARNLAGSDVATADEVNVEDLAPGTQAGRLTLWTES 240
Query: 61 AFKKL 65
A ++
Sbjct: 241 ALAEV 245
>gi|433590195|ref|YP_007279691.1| 50S ribosomal protein L4P [Natrinema pellirubrum DSM 15624]
gi|448332399|ref|ZP_21521643.1| 50S ribosomal protein L4P [Natrinema pellirubrum DSM 15624]
gi|448386090|ref|ZP_21564298.1| 50S ribosomal protein L4P [Haloterrigena thermotolerans DSM 11522]
gi|433304975|gb|AGB30787.1| 50S ribosomal protein L4P [Natrinema pellirubrum DSM 15624]
gi|445627503|gb|ELY80827.1| 50S ribosomal protein L4P [Natrinema pellirubrum DSM 15624]
gi|445655988|gb|ELZ08830.1| 50S ribosomal protein L4P [Haloterrigena thermotolerans DSM 11522]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448345586|ref|ZP_21534475.1| 50S ribosomal protein L4P [Natrinema altunense JCM 12890]
gi|445633519|gb|ELY86706.1| 50S ribosomal protein L4P [Natrinema altunense JCM 12890]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSEAGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|307354324|ref|YP_003895375.1| 50S ribosomal protein L4P [Methanoplanus petrolearius DSM 11571]
gi|307157557|gb|ADN36937.1| 50S ribosomal protein L4P [Methanoplanus petrolearius DSM 11571]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V G D+ L +A +N+ GV++ +V +LN+ LAPG GR +WT
Sbjct: 183 LRGRRYKQRKSLLIVTG-DKQL-RAGKNLAGVDITTVEQLNVELLAPGTQAGRLTVWTVP 240
Query: 61 AFKKLDAL 68
A +L +
Sbjct: 241 AINRLGEM 248
>gi|448535707|ref|ZP_21622227.1| 50S ribosomal protein L4P [Halorubrum hochstenium ATCC 700873]
gi|445703208|gb|ELZ55143.1| 50S ribosomal protein L4P [Halorubrum hochstenium ATCC 700873]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATADEVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
++
Sbjct: 242 VSEV 245
>gi|397773842|ref|YP_006541388.1| 50S ribosomal protein L4P [Natrinema sp. J7-2]
gi|448341389|ref|ZP_21530350.1| 50S ribosomal protein L4P [Natrinema gari JCM 14663]
gi|397682935|gb|AFO57312.1| 50S ribosomal protein L4P [Natrinema sp. J7-2]
gi|445628071|gb|ELY81382.1| 50S ribosomal protein L4P [Natrinema gari JCM 14663]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSEAGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448436253|ref|ZP_21587054.1| 50S ribosomal protein L4P [Halorubrum tebenquichense DSM 14210]
gi|445682921|gb|ELZ35331.1| 50S ribosomal protein L4P [Halorubrum tebenquichense DSM 14210]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATADEVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
++
Sbjct: 242 VSEV 245
>gi|448309695|ref|ZP_21499551.1| 50S ribosomal protein L4P [Natronorubrum bangense JCM 10635]
gi|445589552|gb|ELY43782.1| 50S ribosomal protein L4P [Natronorubrum bangense JCM 10635]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSESGPSRAARNLAGADVTTAAEVNAEALAPGAQPGRLTVWTESALEEV 247
>gi|313125791|ref|YP_004036061.1| 50S ribosomal protein L4 [Halogeometricum borinquense DSM 11551]
gi|448285630|ref|ZP_21476871.1| 50S ribosomal protein L4P [Halogeometricum borinquense DSM 11551]
gi|312292156|gb|ADQ66616.1| LSU ribosomal protein L4P [Halogeometricum borinquense DSM 11551]
gi|445576266|gb|ELY30723.1| 50S ribosomal protein L4P [Halogeometricum borinquense DSM 11551]
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + S +N LAPG H GR I+TESA +++
Sbjct: 203 SKAARNLAGVDVATASNVNAEDLAPGTHAGRLTIFTESAVEEV 245
>gi|269863846|ref|XP_002651367.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
gi|220064660|gb|EED42689.1| LSU ribosomal protein L1E [Enterocytozoon bieneusi H348]
Length = 216
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRF 54
R RR ++ L+V+ D AF NI GVEL +V+ LNLL+L P GH+G F
Sbjct: 162 RGRRYSKQTALLIVH--DNAALSAFSNIEGVELANVNSLNLLRLCPEGHLGHF 212
>gi|448329360|ref|ZP_21518660.1| 50S ribosomal protein L4P [Natrinema versiforme JCM 10478]
gi|445614099|gb|ELY67780.1| 50S ribosomal protein L4P [Natrinema versiforme JCM 10478]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|336252439|ref|YP_004595546.1| 50S ribosomal protein L4P [Halopiger xanaduensis SH-6]
gi|335336428|gb|AEH35667.1| 50S ribosomal protein L4P [Halopiger xanaduensis SH-6]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSESGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|284165493|ref|YP_003403772.1| 50S ribosomal protein L4P [Haloterrigena turkmenica DSM 5511]
gi|284015148|gb|ADB61099.1| 50S ribosomal protein L4P [Haloterrigena turkmenica DSM 5511]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448369938|ref|ZP_21556391.1| 50S ribosomal protein L4P [Natrialba aegyptia DSM 13077]
gi|445650378|gb|ELZ03302.1| 50S ribosomal protein L4P [Natrialba aegyptia DSM 13077]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448350182|ref|ZP_21539001.1| 50S ribosomal protein L4P [Natrialba taiwanensis DSM 12281]
gi|448362303|ref|ZP_21550914.1| 50S ribosomal protein L4P [Natrialba asiatica DSM 12278]
gi|445637689|gb|ELY90837.1| 50S ribosomal protein L4P [Natrialba taiwanensis DSM 12281]
gi|445648824|gb|ELZ01772.1| 50S ribosomal protein L4P [Natrialba asiatica DSM 12278]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448358805|ref|ZP_21547479.1| 50S ribosomal protein L4P [Natrialba chahannaoensis JCM 10990]
gi|445644485|gb|ELY97498.1| 50S ribosomal protein L4P [Natrialba chahannaoensis JCM 10990]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448352598|ref|ZP_21541380.1| 50S ribosomal protein L4P [Natrialba hulunbeirensis JCM 10989]
gi|445642160|gb|ELY95230.1| 50S ribosomal protein L4P [Natrialba hulunbeirensis JCM 10989]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448399311|ref|ZP_21570613.1| 50S ribosomal protein L4P [Haloterrigena limicola JCM 13563]
gi|445669218|gb|ELZ21831.1| 50S ribosomal protein L4P [Haloterrigena limicola JCM 13563]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|289579899|ref|YP_003478365.1| 50S ribosomal protein L4P [Natrialba magadii ATCC 43099]
gi|448281139|ref|ZP_21472447.1| 50S ribosomal protein L4P [Natrialba magadii ATCC 43099]
gi|289529452|gb|ADD03803.1| 50S ribosomal protein L4P [Natrialba magadii ATCC 43099]
gi|445579463|gb|ELY33857.1| 50S ribosomal protein L4P [Natrialba magadii ATCC 43099]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|383625044|ref|ZP_09949450.1| 50S ribosomal protein L4P [Halobiforma lacisalsi AJ5]
gi|448697500|ref|ZP_21698540.1| 50S ribosomal protein L4P [Halobiforma lacisalsi AJ5]
gi|445781453|gb|EMA32309.1| 50S ribosomal protein L4P [Halobiforma lacisalsi AJ5]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448484335|ref|ZP_21606042.1| 50S ribosomal protein L4P [Halorubrum arcis JCM 13916]
gi|445820110|gb|EMA69939.1| 50S ribosomal protein L4P [Halorubrum arcis JCM 13916]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATAREVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
+++
Sbjct: 242 VEEV 245
>gi|448426506|ref|ZP_21583355.1| 50S ribosomal protein L4P [Halorubrum terrestre JCM 10247]
gi|445679386|gb|ELZ31853.1| 50S ribosomal protein L4P [Halorubrum terrestre JCM 10247]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATAREVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
+++
Sbjct: 242 VEEV 245
>gi|448475309|ref|ZP_21603027.1| 50S ribosomal protein L4P [Halorubrum aidingense JCM 13560]
gi|445816780|gb|EMA66667.1| 50S ribosomal protein L4P [Halorubrum aidingense JCM 13560]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYSQPKSVLVVTSEE--PSRAARNLSGVDVATAGEVNAEDLAPGTHPGRLTLWTESA 241
Query: 62 FKKL 65
++
Sbjct: 242 IAEV 245
>gi|448452124|ref|ZP_21593144.1| 50S ribosomal protein L4P [Halorubrum litoreum JCM 13561]
gi|445809768|gb|EMA59806.1| 50S ribosomal protein L4P [Halorubrum litoreum JCM 13561]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATAREVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
+++
Sbjct: 242 VEEV 245
>gi|448508627|ref|ZP_21615578.1| 50S ribosomal protein L4P [Halorubrum distributum JCM 9100]
gi|448517690|ref|ZP_21617264.1| 50S ribosomal protein L4P [Halorubrum distributum JCM 10118]
gi|445697253|gb|ELZ49323.1| 50S ribosomal protein L4P [Halorubrum distributum JCM 9100]
gi|445705905|gb|ELZ57793.1| 50S ribosomal protein L4P [Halorubrum distributum JCM 10118]
Length = 248
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATAREVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
+++
Sbjct: 242 VEEV 245
>gi|448704117|ref|ZP_21700598.1| 50S ribosomal protein L4P [Halobiforma nitratireducens JCM 10879]
gi|445796506|gb|EMA47010.1| 50S ribosomal protein L4P [Halobiforma nitratireducens JCM 10879]
Length = 250
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVATAAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|355571382|ref|ZP_09042634.1| 50S ribosomal protein L4P [Methanolinea tarda NOBI-1]
gi|354825770|gb|EHF09992.1| 50S ribosomal protein L4P [Methanolinea tarda NOBI-1]
Length = 249
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR Q++ L+V GK A N+ GV++ +V +LN LAPG GR +WTES
Sbjct: 183 MRGRRYKQKKSLLIVTGKKP--LAAAGNLAGVDVATVDQLNCELLAPGTLPGRLTVWTES 240
Query: 61 AFKKL 65
A +L
Sbjct: 241 AIARL 245
>gi|347524199|ref|YP_004781769.1| 50S ribosomal protein L4P [Pyrolobus fumarii 1A]
gi|343461081|gb|AEM39517.1| 50S ribosomal protein L4P [Pyrolobus fumarii 1A]
Length = 272
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + L V KA N+PGV++ + S +N+L LAPGGH GR ++ T
Sbjct: 198 MRGRRYVTPKSVLFVLSSHTSPFAKAVANLPGVDVATPSYVNVLLLAPGGHPGRLMLVTR 257
Query: 60 SAFKKL 65
SA + L
Sbjct: 258 SALEAL 263
>gi|41614941|ref|NP_963439.1| 50S ribosomal protein L4P [Nanoarchaeum equitans Kin4-M]
gi|46396577|sp|P60847.1|RL4_NANEQ RecName: Full=50S ribosomal protein L4P
gi|40068665|gb|AAR39000.1| NEQ146 [Nanoarchaeum equitans Kin4-M]
Length = 268
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 RNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R I+R+GPL+V + L KA NIPG+++ V LN+ LAPG GR +I ++
Sbjct: 197 RGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELLAPGAKPGRLLIISKD 256
Query: 61 AFKKL 65
A + L
Sbjct: 257 ALETL 261
>gi|448392360|ref|ZP_21567134.1| 50S ribosomal protein L4P [Haloterrigena salina JCM 13891]
gi|445664450|gb|ELZ17159.1| 50S ribosomal protein L4P [Haloterrigena salina JCM 13891]
Length = 250
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
L V + G ++A RN+ G ++ + +++N LAPG GR +WTESA +++
Sbjct: 195 LFVTSSETGPSRAARNLAGADVTTSAEVNAEDLAPGAQPGRLTVWTESALEEV 247
>gi|448503711|ref|ZP_21613340.1| 50S ribosomal protein L4P [Halorubrum coriense DSM 10284]
gi|445691912|gb|ELZ44095.1| 50S ribosomal protein L4P [Halorubrum coriense DSM 10284]
Length = 248
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ Q + LVV ++ ++A RN+ GV++ + ++N LAPG H GR +WTESA
Sbjct: 184 RGRKYRQPKSVLVVTSEE--PSRAARNLAGVDVATAREVNAEDLAPGAHPGRLTLWTESA 241
Query: 62 FKKL 65
++
Sbjct: 242 VAEV 245
>gi|305662571|ref|YP_003858859.1| 50S ribosomal protein L4 [Ignisphaera aggregans DSM 17230]
gi|304377140|gb|ADM26979.1| LSU ribosomal protein L4P [Ignisphaera aggregans DSM 17230]
Length = 273
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR + + L + R + KA RN+PGV+ + LN+L LAPGG GR I ++
Sbjct: 200 RGRRYVTPKSLLFIVSNTRAPIIKAIRNLPGVDYSTPDNLNILTLAPGGMPGRLAIISQK 259
Query: 61 AFKKLDALY 69
A + +D Y
Sbjct: 260 ALELIDQKY 268
>gi|219851108|ref|YP_002465540.1| 50S ribosomal protein L4P [Methanosphaerula palustris E1-9c]
gi|219545367|gb|ACL15817.1| ribosomal protein L4/L1e [Methanosphaerula palustris E1-9c]
Length = 249
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V +D L A N+ GV+++SV+ LN LAPG GR +WT+
Sbjct: 183 LRGRRYKQRKSLLIVT-RDEPLAAAA-NLAGVDVVSVNALNTELLAPGAQAGRLTVWTQG 240
Query: 61 AF 62
A
Sbjct: 241 AL 242
>gi|145592243|ref|YP_001154245.1| 50S ribosomal protein L4 [Pyrobaculum arsenaticum DSM 13514]
gi|145284011|gb|ABP51593.1| LSU ribosomal protein L4P [Pyrobaculum arsenaticum DSM 13514]
Length = 278
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKA-FRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV A RN PGV+++ LN+L LAPG GR +WT
Sbjct: 208 MRGRRYKEPKSVLVVVSAADAPLAAAVRNFPGVDVVPAEHLNMLVLAPGAVPGRLTLWTA 267
Query: 60 SAFKKLDALY 69
A +KL L+
Sbjct: 268 PAVEKLRGLF 277
>gi|448737863|ref|ZP_21719896.1| 50S ribosomal protein L4P [Halococcus thailandensis JCM 13552]
gi|445802825|gb|EMA53126.1| 50S ribosomal protein L4P [Halococcus thailandensis JCM 13552]
Length = 247
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
++A RN+ G ++ + S++N LAPG GR IWTESA ++++
Sbjct: 202 SRAARNLAGADVATASEVNTEDLAPGTQSGRLTIWTESAIEEVE 245
>gi|255513435|gb|EET89701.1| ribosomal protein L4/L1e [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 261
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 5 RRIQRRG----PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
RR QR+ ++ D G +A RNIPG+ + +S L + L PGG IW+ES
Sbjct: 187 RRTQRKAFSKKIAIIVLNDDGAVRASRNIPGITAVKLSALKVNDLVPGGEHPLVPIWSES 246
Query: 61 AFKKLD 66
A K +D
Sbjct: 247 ALKSID 252
>gi|435852137|ref|YP_007313723.1| 50S ribosomal protein L4P [Methanomethylovorans hollandica DSM
15978]
gi|433662767|gb|AGB50193.1| 50S ribosomal protein L4P [Methanomethylovorans hollandica DSM
15978]
Length = 255
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR R+ LVV + L + RN+ GV+++SVS ++ LAPG H GR IWTES
Sbjct: 186 LRGRRYKNRKSLLVVADEGSALFNSARNLAGVDVVSVSSISTELLAPGTHAGRLTIWTES 245
Query: 61 AFKKLDALY 69
A L+ ++
Sbjct: 246 AIAALEGMF 254
>gi|296242584|ref|YP_003650071.1| 50S ribosomal protein L4P [Thermosphaera aggregans DSM 11486]
gi|296095168|gb|ADG91119.1| LSU ribosomal protein L4P [Thermosphaera aggregans DSM 11486]
Length = 271
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR ++ + L V+ ++ L KA RN PGV++ + L +L LAPGG GR ++++
Sbjct: 197 MRGRRYVEPKSILFVLTSYEKPLAKAVRNFPGVDIATPGNLGILHLAPGGVPGRLTVFSK 256
Query: 60 SAFKKL 65
+A +++
Sbjct: 257 TALEEV 262
>gi|15790633|ref|NP_280457.1| 50S ribosomal protein L4 [Halobacterium sp. NRC-1]
gi|169236372|ref|YP_001689572.1| 50S ribosomal protein L4P [Halobacterium salinarum R1]
gi|46396658|sp|Q9HPD3.1|RL4_HALSA RecName: Full=50S ribosomal protein L4P
gi|226730670|sp|B0R657.1|RL4_HALS3 RecName: Full=50S ribosomal protein L4P
gi|10581160|gb|AAG19937.1| 50S ribosomal protein L4E [Halobacterium sp. NRC-1]
gi|167727438|emb|CAP14226.1| 50S ribosomal protein L4 [Halobacterium salinarum R1]
Length = 250
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + L V + G + A RN+ GV++ + ++N LAPG GR +WTES
Sbjct: 183 LRGRKYQEPTSILFVTASESGPSTAARNLAGVDVATGREVNAEDLAPGAEPGRLTVWTES 242
Query: 61 AFKKL 65
A +++
Sbjct: 243 AVEEV 247
>gi|448411356|ref|ZP_21575821.1| 50S ribosomal protein L4P [Halosimplex carlsbadense 2-9-1]
gi|445670544|gb|ELZ23143.1| 50S ribosomal protein L4P [Halosimplex carlsbadense 2-9-1]
Length = 247
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + ++N LAPGG GR +WTESA ++
Sbjct: 202 STAARNLAGADVTTAREVNAEDLAPGGDAGRLTVWTESAVSEV 244
>gi|448611746|ref|ZP_21662176.1| 50S ribosomal protein L4P [Haloferax mucosum ATCC BAA-1512]
gi|445742507|gb|ELZ94001.1| 50S ribosomal protein L4P [Haloferax mucosum ATCC BAA-1512]
Length = 248
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 14 VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+++ G +KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 194 ILFVTSEGPSKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESAIEEV 245
>gi|409731023|ref|ZP_11272573.1| 50S ribosomal protein L4P [Halococcus hamelinensis 100A6]
gi|448724781|ref|ZP_21707286.1| 50S ribosomal protein L4P [Halococcus hamelinensis 100A6]
gi|445784990|gb|EMA35786.1| 50S ribosomal protein L4P [Halococcus hamelinensis 100A6]
Length = 245
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
++A RN+ G ++ + ++N LAPG GR IWTESA +++
Sbjct: 200 SRAARNLAGADVATAQEVNAEDLAPGTQAGRLTIWTESAIEEV 242
>gi|118430943|ref|NP_147063.2| 50S ribosomal protein L4 [Aeropyrum pernix K1]
gi|150421649|sp|Q9YFM1.3|RL4_AERPE RecName: Full=50S ribosomal protein L4P
gi|116062269|dbj|BAA79140.2| 50S ribosomal protein L4P [Aeropyrum pernix K1]
Length = 272
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + L V R L A + +PGV++++ + L++L LAPGGH GR I+T
Sbjct: 198 MRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPGRLTIYTT 257
Query: 60 SAFKKLD 66
A K L
Sbjct: 258 EALKLLS 264
>gi|448578200|ref|ZP_21643635.1| 50S ribosomal protein L4P [Haloferax larsenii JCM 13917]
gi|445726741|gb|ELZ78357.1| 50S ribosomal protein L4P [Haloferax larsenii JCM 13917]
Length = 248
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR I+TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTIFTESALEEV 245
>gi|448592780|ref|ZP_21651827.1| 50S ribosomal protein L4P [Haloferax elongans ATCC BAA-1513]
gi|445730806|gb|ELZ82393.1| 50S ribosomal protein L4P [Haloferax elongans ATCC BAA-1513]
Length = 248
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR I+TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTIFTESALEEV 245
>gi|448735134|ref|ZP_21717351.1| 50S ribosomal protein L4P [Halococcus salifodinae DSM 8989]
gi|445798747|gb|EMA49138.1| 50S ribosomal protein L4P [Halococcus salifodinae DSM 8989]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
++A RN+ G ++ + ++N LAPG GR IWTESA +++
Sbjct: 201 SRAARNLAGADVATAREVNTEDLAPGAQGGRLTIWTESAIEEV 243
>gi|448685261|ref|ZP_21693253.1| 50S ribosomal protein L4P [Haloarcula japonica DSM 6131]
gi|445781872|gb|EMA32723.1| 50S ribosomal protein L4P [Haloarcula japonica DSM 6131]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 SKAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|448730378|ref|ZP_21712686.1| 50S ribosomal protein L4P [Halococcus saccharolyticus DSM 5350]
gi|445793546|gb|EMA44118.1| 50S ribosomal protein L4P [Halococcus saccharolyticus DSM 5350]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
++A RN+ G ++ + ++N LAPG GR IWTESA +++
Sbjct: 201 SRAARNLAGADVATAREVNTEDLAPGAQGGRLTIWTESAIEEV 243
>gi|292656684|ref|YP_003536581.1| 50S ribosomal protein L4 [Haloferax volcanii DS2]
gi|448290688|ref|ZP_21481834.1| 50S ribosomal protein L4P [Haloferax volcanii DS2]
gi|291370536|gb|ADE02763.1| ribosomal protein L4.eR [Haloferax volcanii DS2]
gi|445578059|gb|ELY32474.1| 50S ribosomal protein L4P [Haloferax volcanii DS2]
Length = 248
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|448726793|ref|ZP_21709185.1| 50S ribosomal protein L4P [Halococcus morrhuae DSM 1307]
gi|445793839|gb|EMA44410.1| 50S ribosomal protein L4P [Halococcus morrhuae DSM 1307]
Length = 247
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
++A RN+ G ++ + ++N LAPG GR IWTESA ++++
Sbjct: 202 SRAARNLAGADVATAREVNTEDLAPGTQSGRLTIWTESAIEEVE 245
>gi|218884487|ref|YP_002428869.1| 50S ribosomal protein L4P [Desulfurococcus kamchatkensis 1221n]
gi|218766103|gb|ACL11502.1| 50S ribosomal protein L4P [Desulfurococcus kamchatkensis 1221n]
Length = 275
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R ++ R L +V L KA RN+PGV++ + L++L LAPGG GR + +
Sbjct: 201 MRGRTYVEPRSILFIVSSYSIPLAKAVRNLPGVDIATPGNLSILHLAPGGVPGRLTVISM 260
Query: 60 SAFKKLDALY 69
A +L + Y
Sbjct: 261 KALNELASKY 270
>gi|433420036|ref|ZP_20405422.1| 50S ribosomal protein L4P [Haloferax sp. BAB2207]
gi|448569071|ref|ZP_21638483.1| 50S ribosomal protein L4P [Haloferax lucentense DSM 14919]
gi|448600510|ref|ZP_21656006.1| 50S ribosomal protein L4P [Haloferax alexandrinus JCM 10717]
gi|432199293|gb|ELK55484.1| 50S ribosomal protein L4P [Haloferax sp. BAB2207]
gi|445725221|gb|ELZ76846.1| 50S ribosomal protein L4P [Haloferax lucentense DSM 14919]
gi|445735227|gb|ELZ86779.1| 50S ribosomal protein L4P [Haloferax alexandrinus JCM 10717]
Length = 248
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|448545985|ref|ZP_21626312.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-646]
gi|448548059|ref|ZP_21627403.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-645]
gi|448557082|ref|ZP_21632517.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-644]
gi|445703331|gb|ELZ55262.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-646]
gi|445714761|gb|ELZ66519.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-645]
gi|445714951|gb|ELZ66708.1| 50S ribosomal protein L4P [Haloferax sp. ATCC BAA-644]
Length = 248
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|257053360|ref|YP_003131193.1| 50S ribosomal protein L4P [Halorhabdus utahensis DSM 12940]
gi|256692123|gb|ACV12460.1| ribosomal protein L4/L1e [Halorhabdus utahensis DSM 12940]
Length = 247
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ G ++ + ++N LAPG GR +WTESA ++
Sbjct: 202 SKAARNLAGADVTTAREVNAEDLAPGTDAGRLTLWTESAIAEV 244
>gi|448606196|ref|ZP_21658775.1| 50S ribosomal protein L4P [Haloferax sulfurifontis ATCC BAA-897]
gi|448623081|ref|ZP_21669730.1| 50S ribosomal protein L4P [Haloferax denitrificans ATCC 35960]
gi|445739613|gb|ELZ91120.1| 50S ribosomal protein L4P [Haloferax sulfurifontis ATCC BAA-897]
gi|445753589|gb|EMA05006.1| 50S ribosomal protein L4P [Haloferax denitrificans ATCC 35960]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|448565516|ref|ZP_21636383.1| 50S ribosomal protein L4P [Haloferax prahovense DSM 18310]
gi|445715260|gb|ELZ67016.1| 50S ribosomal protein L4P [Haloferax prahovense DSM 18310]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|448583471|ref|ZP_21646827.1| 50S ribosomal protein L4P [Haloferax gibbonsii ATCC 33959]
gi|445729700|gb|ELZ81295.1| 50S ribosomal protein L4P [Haloferax gibbonsii ATCC 33959]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESALEEV 245
>gi|322372167|ref|ZP_08046708.1| 50S ribosomal protein L4P [Haladaptatus paucihalophilus DX253]
gi|320548176|gb|EFW89849.1| 50S ribosomal protein L4P [Haladaptatus paucihalophilus DX253]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
++A RN+ G ++ + ++N LAPG GR +WTESA +++
Sbjct: 203 SRAARNLAGADVATAREVNAEDLAPGTQAGRLTVWTESALEEV 245
>gi|389848016|ref|YP_006350255.1| 50S ribosomal protein L4P [Haloferax mediterranei ATCC 33500]
gi|448618113|ref|ZP_21666458.1| 50S ribosomal protein L4P [Haloferax mediterranei ATCC 33500]
gi|388245322|gb|AFK20268.1| 50S ribosomal protein L4P [Haloferax mediterranei ATCC 33500]
gi|445747668|gb|ELZ99123.1| 50S ribosomal protein L4P [Haloferax mediterranei ATCC 33500]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + ++ LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVSAEDLAPGTHAGRLTLFTESAIEEV 245
>gi|452206447|ref|YP_007486569.1| 50S ribosomal protein L4 [Natronomonas moolapensis 8.8.11]
gi|452082547|emb|CCQ35805.1| 50S ribosomal protein L4 [Natronomonas moolapensis 8.8.11]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R R+ Q + LVV + L A RN+ G ++ + ++++ LAPG GR +WTES
Sbjct: 183 TRGRKYTQPKSVLVVTSGEPSL--AARNLAGADVATAAEVSTEDLAPGTDAGRLTLWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 ALEEV 245
>gi|288931511|ref|YP_003435571.1| 50S ribosomal protein L4P [Ferroglobus placidus DSM 10642]
gi|288893759|gb|ADC65296.1| 50S ribosomal protein L4P [Ferroglobus placidus DSM 10642]
Length = 251
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 24 KAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
KA +N+ GV+++ LN+ LAPGGH GR ++T+SA +L
Sbjct: 206 KAAKNLAGVDVVLAKDLNVELLAPGGHAGRLTVYTKSAIAQL 247
>gi|448415418|ref|ZP_21578218.1| 50S ribosomal protein L4P [Halosarcina pallida JCM 14848]
gi|445681076|gb|ELZ33517.1| 50S ribosomal protein L4P [Halosarcina pallida JCM 14848]
Length = 248
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ GV++ + + + +LAPG H GR ++TESA +++
Sbjct: 203 SKAARNLAGVDVATAANVGAEELAPGTHAGRLTLFTESAIEEV 245
>gi|335437511|ref|ZP_08560287.1| 50S ribosomal protein L4P [Halorhabdus tiamatea SARL4B]
gi|334895859|gb|EGM34022.1| 50S ribosomal protein L4P [Halorhabdus tiamatea SARL4B]
Length = 91
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ G ++ + ++N LAPG GR +WTESA ++
Sbjct: 46 SKAARNLAGADVTTAREVNAEDLAPGTDAGRLTLWTESALAEV 88
>gi|407464762|ref|YP_006775644.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus sp. AR2]
gi|407047950|gb|AFS82702.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus sp. AR2]
Length = 270
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V G L+KA +IPGVE+ +V +L++L LAPG R ++++S
Sbjct: 191 LRGRTKKIGKSVLFVTGDSSNLSKATGSIPGVEVRNVKELSVLDLAPGSDPIRLTVYSKS 250
Query: 61 AFKKL 65
A +++
Sbjct: 251 AIEEI 255
>gi|257387877|ref|YP_003177650.1| 50S ribosomal protein L4 [Halomicrobium mukohataei DSM 12286]
gi|257170184|gb|ACV47943.1| ribosomal protein L4/L1e [Halomicrobium mukohataei DSM 12286]
Length = 247
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 4 RRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFK 63
R R RR +++ +KA RN+ G ++ + ++N LAPG GR IWTESA
Sbjct: 183 RGRKYRRPSSILFVTSEEPSKAARNLAGADVTTAREVNAEDLAPGTAPGRLTIWTESALA 242
Query: 64 KL 65
++
Sbjct: 243 EV 244
>gi|448671481|ref|ZP_21687420.1| 50S ribosomal protein L4P [Haloarcula amylolytica JCM 13557]
gi|445766084|gb|EMA17221.1| 50S ribosomal protein L4P [Haloarcula amylolytica JCM 13557]
Length = 246
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGEPGRLTVFTESALAEV 243
>gi|390938992|ref|YP_006402730.1| 50S ribosomal protein L4P [Desulfurococcus fermentans DSM 16532]
gi|390192099|gb|AFL67155.1| 50S ribosomal protein L4P [Desulfurococcus fermentans DSM 16532]
Length = 272
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R ++ R L +V L KA RN+PGV++ + L++L LAPGG GR + +
Sbjct: 198 MRGRTYVEPRSILFIVSSYSVPLAKAVRNLPGVDIATPGNLSILHLAPGGVPGRLTVISM 257
Query: 60 SAFKKLDALY 69
A ++ + Y
Sbjct: 258 KALNEIASKY 267
>gi|335438908|ref|ZP_08561639.1| 50S ribosomal protein L4P [Halorhabdus tiamatea SARL4B]
gi|334890179|gb|EGM28453.1| 50S ribosomal protein L4P [Halorhabdus tiamatea SARL4B]
Length = 55
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+KA RN+ G ++ + ++N LAPG GR +WTESA ++
Sbjct: 10 SKAARNLAGADVTTAREVNAEDLAPGTDAGRLTLWTESALAEV 52
>gi|399577347|ref|ZP_10771100.1| LSU ribosomal protein l4p [Halogranum salarium B-1]
gi|399237730|gb|EJN58661.1| LSU ribosomal protein l4p [Halogranum salarium B-1]
Length = 248
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
++A RN+ G ++ + + ++ LAPG H GR I+TESA +++
Sbjct: 203 SRAARNLAGADVATAADVSAEDLAPGTHAGRLTIFTESALEEV 245
>gi|344212412|ref|YP_004796732.1| 50S ribosomal protein L4P [Haloarcula hispanica ATCC 33960]
gi|343783767|gb|AEM57744.1| 50S ribosomal protein L4P [Haloarcula hispanica ATCC 33960]
Length = 246
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|448648020|ref|ZP_21679498.1| 50S ribosomal protein L4P [Haloarcula californiae ATCC 33799]
gi|445775890|gb|EMA26885.1| 50S ribosomal protein L4P [Haloarcula californiae ATCC 33799]
Length = 246
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|320101367|ref|YP_004176959.1| 50S ribosomal protein L4P [Desulfurococcus mucosus DSM 2162]
gi|319753719|gb|ADV65477.1| LSU ribosomal protein L4P [Desulfurococcus mucosus DSM 2162]
Length = 272
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R ++ R L V + L +A RN+PGV++ + L++L LAPGG GR ++ +
Sbjct: 198 MRGRAYVEPRSILFVLSSYESPLARAVRNLPGVDVSTPGNLSVLHLAPGGVPGRLMVISR 257
Query: 60 SAFKKLDALY 69
A +++ + Y
Sbjct: 258 RALEEVASKY 267
>gi|55378383|ref|YP_136233.1| 50S ribosomal protein L4 [Haloarcula marismortui ATCC 43049]
gi|448636986|ref|ZP_21675434.1| 50S ribosomal protein L4P [Haloarcula sinaiiensis ATCC 33800]
gi|57015333|sp|P12735.4|RL4_HALMA RecName: Full=50S ribosomal protein L4P; AltName: Full=Hl6;
AltName: Full=Hmal4
gi|188596004|pdb|3CC2|C Chain C, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596035|pdb|3CC4|C Chain C, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596066|pdb|3CC7|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596097|pdb|3CCE|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596128|pdb|3CCJ|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596159|pdb|3CCL|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596190|pdb|3CCM|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596221|pdb|3CCQ|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596252|pdb|3CCR|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596283|pdb|3CCS|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596314|pdb|3CCU|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596345|pdb|3CCV|C Chain C, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596376|pdb|3CD6|C Chain C, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc-puromycin
gi|194368707|pdb|3CPW|C Chain C, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581910|pdb|3CMA|C Chain C, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581943|pdb|3CME|C Chain C, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|228312144|pdb|3G4S|C Chain C, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312200|pdb|3G6E|C Chain C, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312236|pdb|3G71|C Chain C, Co-crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
gi|290790038|pdb|3I55|C Chain C, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790069|pdb|3I56|C Chain C, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|374977944|pdb|4ADX|C Chain C, The Cryo-Em Structure Of The Archaeal 50s Ribosomal
Subunit In Complex With Initiation Factor 6
gi|148802|gb|AAA86860.1| ribosomal protein L6 [Haloarcula marismortui]
gi|55231108|gb|AAV46527.1| 50S ribosomal protein L4 [Haloarcula marismortui ATCC 43049]
gi|445765292|gb|EMA16431.1| 50S ribosomal protein L4P [Haloarcula sinaiiensis ATCC 33800]
Length = 246
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|448681422|ref|ZP_21691555.1| 50S ribosomal protein L4P [Haloarcula argentinensis DSM 12282]
gi|445767955|gb|EMA19048.1| 50S ribosomal protein L4P [Haloarcula argentinensis DSM 12282]
Length = 246
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|15825945|pdb|1JJ2|C Chain C, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150990|pdb|1KQS|C Chain C, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218924|pdb|1K8A|E Chain E, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218958|pdb|1K9M|E Chain E, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219001|pdb|1KD1|E Chain E, Co-crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219328|pdb|1M1K|E Chain E, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159023|pdb|1M90|E Chain E, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811120|pdb|1K73|E Chain E, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811150|pdb|1KC8|E Chain E, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811189|pdb|1N8R|E Chain E, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811219|pdb|1NJI|E Chain E, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927903|pdb|1Q7Y|E Chain E, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927938|pdb|1Q81|E Chain E, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927974|pdb|1Q82|E Chain E, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928010|pdb|1Q86|E Chain E, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654675|pdb|1QVF|C Chain C, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654708|pdb|1QVG|C Chain C, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|50513472|pdb|1S72|C Chain C, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|55670538|pdb|1W2B|C Chain C, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|66360786|pdb|1YHQ|C Chain C, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360819|pdb|1YI2|C Chain C, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360852|pdb|1YIJ|C Chain C, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360885|pdb|1YIT|C Chain C, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360918|pdb|1YJ9|C Chain C, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360951|pdb|1YJN|C Chain C, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360984|pdb|1YJW|C Chain C, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753128|pdb|1VQ4|C Chain C, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753160|pdb|1VQ5|C Chain C, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753192|pdb|1VQ6|C Chain C, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753224|pdb|1VQ7|C Chain C, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753255|pdb|1VQ8|C Chain C, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753287|pdb|1VQ9|C Chain C, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753318|pdb|1VQK|C Chain C, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753349|pdb|1VQL|C Chain C, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753380|pdb|1VQM|C Chain C, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753412|pdb|1VQN|C Chain C, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753443|pdb|1VQO|C Chain C, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753475|pdb|1VQP|C Chain C, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580175|pdb|2OTJ|C Chain C, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|145580206|pdb|2OTL|C Chain C, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|171848839|pdb|2QA4|C Chain C, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|208435497|pdb|2QEX|C Chain C, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|228311914|pdb|3CXC|C Chain C, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|392311508|pdb|3OW2|C Chain C, Crystal Structure Of Enhanced Macrolide Bound To 50s
Ribosomal Subunit
Length = 246
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|10120922|pdb|1FFK|C Chain C, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
gi|14278036|pdb|1GIY|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
gi|28373725|pdb|1ML5|FF Chain f, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|66361022|pdb|1YL3|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. Large Subunit. The Coordinates For The Small
Subunit Are In The Pdb Entry 1yl4.
gi|88192262|pdb|2B66|F Chain F, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400
gi|88192325|pdb|2B9N|F Chain F, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400.
gi|88192380|pdb|2B9P|F Chain F, 50s Ribosomal Subunit From A Crystal Structure Of The
Ribosome In Complex With Trnas And Mrna With A Stop
Codon In The A-Site. This File Contains The 50s Subunit
From A Crystal Structure Of The Ribosome In Complex With
Trnas And Mrna With A Stop Codon In The A-Site And Is
Described In Remark 400
Length = 246
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEV 243
>gi|110668740|ref|YP_658551.1| 50S ribosomal protein L4P [Haloquadratum walsbyi DSM 16790]
gi|385804240|ref|YP_005840640.1| 50S ribosomal protein L4 [Haloquadratum walsbyi C23]
gi|121687180|sp|Q18GF0.1|RL4_HALWD RecName: Full=50S ribosomal protein L4P
gi|109626487|emb|CAJ52948.1| 50S ribosomal protein L4 [Haloquadratum walsbyi DSM 16790]
gi|339729732|emb|CCC41010.1| 50S ribosomal protein L4 [Haloquadratum walsbyi C23]
Length = 248
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
+ R R RR +++ +KA RN+ G ++++ + ++ LAPG GR ++TESA
Sbjct: 182 KTRGRKYRRPKSILFITSDEPSKAARNLAGADVVTAANVSAEDLAPGTQPGRLTVYTESA 241
Query: 62 FKKL 65
K++
Sbjct: 242 IKEV 245
>gi|386876662|ref|ZP_10118755.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus salaria BD31]
gi|386805530|gb|EIJ65056.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus salaria BD31]
Length = 270
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V L+KA IPGVE + L++L LAPG H R ++++S
Sbjct: 191 LRGRSKKVGKSVLFVTSDSSKLSKAIGAIPGVEAKNAKDLSVLDLAPGSHPIRLTVYSKS 250
Query: 61 AFKKL 65
A +++
Sbjct: 251 ALEEI 255
>gi|156937756|ref|YP_001435552.1| 50S ribosomal protein L4 [Ignicoccus hospitalis KIN4/I]
gi|156566740|gb|ABU82145.1| LSU ribosomal protein L4P [Ignicoccus hospitalis KIN4/I]
Length = 271
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR +R GPL++ + + +A PG ++++V+ L++ LAPGG GR I ++
Sbjct: 200 MRGRRYKKRVGPLIIVSTEEAPVRRAASAFPGTDVVAVNLLSVKHLAPGGVPGRLTIISK 259
Query: 60 SAFKKL 65
A +++
Sbjct: 260 KALEEI 265
>gi|448630849|ref|ZP_21673304.1| 50S ribosomal protein L4P [Haloarcula vallismortis ATCC 29715]
gi|445755223|gb|EMA06613.1| 50S ribosomal protein L4P [Haloarcula vallismortis ATCC 29715]
Length = 246
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 23 TKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ A RN+ G ++ + S++N LAPGG GR ++TESA ++
Sbjct: 201 STAARNLAGADVATASEVNSEDLAPGGVPGRLTVFTESALAEV 243
>gi|344236167|gb|EGV92270.1| 60S ribosomal protein L4 [Cricetulus griseus]
Length = 175
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKA 25
MRNRRRIQ RGP ++Y +D G+ KA
Sbjct: 140 MRNRRRIQHRGPCIIYNEDNGIIKA 164
>gi|161528316|ref|YP_001582142.1| 50S ribosomal protein L4P [Nitrosopumilus maritimus SCM1]
gi|160339617|gb|ABX12704.1| ribosomal protein L4/L1e [Nitrosopumilus maritimus SCM1]
Length = 271
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V ++KA +PGVE SV L++L LAPG R ++++S
Sbjct: 192 LRGRSKKVGKSVLFVTKDASNISKAIGALPGVEATSVKDLSVLDLAPGSDPIRLTVYSKS 251
Query: 61 AFKKL 65
A +++
Sbjct: 252 AIEEI 256
>gi|158187738|gb|ABW23158.1| ribosomal protein rpl4 [Arenicola marina]
Length = 137
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAFK+LD +YG+W+ + K Y+LP P M N+
Sbjct: 1 SAFKQLDTIYGTWRKPSQKKNNYNLPMPMMGNS 33
>gi|124028158|ref|YP_001013478.1| 50S ribosomal protein L4P [Hyperthermus butylicus DSM 5456]
gi|123978852|gb|ABM81133.1| 50S ribosomal protein L4 [Hyperthermus butylicus DSM 5456]
Length = 277
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 2 RNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
R RR I + L +V + +A +PGV++ +N+L+LAPGG GR + T S
Sbjct: 202 RGRRYITPKSILFIVSNHNSSFARAVAGLPGVDVAEPWNVNVLQLAPGGVPGRLTVITRS 261
Query: 61 AFKKLDALYGS 71
A ++L + S
Sbjct: 262 ALEELGKRFDS 272
>gi|302348733|ref|YP_003816371.1| 50S ribosomal protein L4P [Acidilobus saccharovorans 345-15]
gi|302329145|gb|ADL19340.1| 50S ribosomal protein L4P [Acidilobus saccharovorans 345-15]
Length = 276
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + L +V D ++ R PGV+++ +++L+LAPGG GR + T
Sbjct: 200 MRGRRYVTPVSILFIVDDIDSPFARSVRGFPGVDVVEPQLVSVLELAPGGEPGRLTVITS 259
Query: 60 SAFKKL 65
+A L
Sbjct: 260 NALNAL 265
>gi|380750078|gb|AFE48780.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi]
Length = 207
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
+VV G+D + + RNIPGV++ + LN+L ++ VI TE+A KK++ + G
Sbjct: 154 VVVEGEDVNVELSARNIPGVQVTTAEGLNVLDISSADS----VIITEAAAKKVEEVLG 207
>gi|418323019|ref|ZP_12934320.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
gi|365230673|gb|EHM71759.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
Length = 207
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 13 LVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
+VV G+D + + RNIPGV++ + LN+L ++ VI TE+A KK++ + G
Sbjct: 154 VVVEGEDVNVELSARNIPGVQVTTAEGLNVLDISSADS----VIITEAAAKKVEEVLG 207
>gi|407462402|ref|YP_006773719.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus koreensis AR1]
gi|407046024|gb|AFS80777.1| 50S ribosomal protein L4P [Candidatus Nitrosopumilus koreensis AR1]
Length = 271
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V ++KA +PGVE SV L++L LAPG R ++++S
Sbjct: 192 LRGRSKKIGKSVLFVTKDASNISKAIGALPGVEAKSVKDLSVLDLAPGSDPIRLTVYSKS 251
Query: 61 AFKKL 65
A +++
Sbjct: 252 AIEEI 256
>gi|432117644|gb|ELK37879.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 179
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 10 RGPLVVYGKDRGLTKAFRNIPGVELISVSKLNL 42
+GP ++Y D+G+ K FRNIPGV L++ L
Sbjct: 75 QGPCIIYNVDKGIIKVFRNIPGVTLLNAKDHKL 107
>gi|2425177|dbj|BAA22271.1| ribosomal protein L4 [Halobacterium salinarum]
Length = 248
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ + L V + G + A RN+ GV++ S ++N LAPG GR +WTES
Sbjct: 183 LRGRKYQEPTSILFVTASESGPSTA-RNLAGVDVASGREVNAEDLAPG-EPGRLTVWTES 240
Query: 61 AFKKL 65
A +++
Sbjct: 241 AVEEV 245
>gi|408404338|ref|YP_006862321.1| 50S ribosomal protein L4p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521622|gb|ADK26022.1| r-protein L4p [Candidatus Nitrososphaera gargensis]
gi|408364934|gb|AFU58664.1| 50S ribosomal protein L4p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 270
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 2 RNRRRIQRRG--PLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
R R R R G L+V G + L R+I GV++ ++++ LAPG R I+++
Sbjct: 189 RRRGRPARSGTSALIVVGNNSKLVALSRSISGVDIKHAKDVSVIDLAPGSKPIRLTIFSQ 248
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSL 84
SA +L +L +AP+ K L
Sbjct: 249 SAIDELKSL------QAPMHKVMEL 267
>gi|108743789|gb|ABG02203.1| IP15855p [Drosophila melanogaster]
Length = 233
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 11 GPLVVYGKDRGLTKAFRNIP 30
GPLVVY KD GL KAFRNIP
Sbjct: 209 GPLVVYDKDEGLRKAFRNIP 228
>gi|432117643|gb|ELK37878.1| 60S ribosomal protein L4 [Myotis davidii]
Length = 305
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 10 RGPLVVYGKDRGLTKAFRNIPGVELISVSKLNL 42
+GP ++Y D G+ K FRNIPGV L++ L
Sbjct: 75 QGPCIIYNVDNGIIKVFRNIPGVTLLNAKDHKL 107
>gi|288574663|ref|ZP_06393020.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570404|gb|EFC91961.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 206
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 12 PLVVYG-KDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
PLV+ +D ++ + RNIPG +++ V +N+ L GHV F+ + A KKL+ +Y
Sbjct: 151 PLVIVDHRDENISMSTRNIPGADVLHVDSINVYDLLKHGHV--FI--SAGAVKKLEEVY 205
>gi|340344790|ref|ZP_08667922.1| Ribosomal protein L4/L1e [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519931|gb|EGP93654.1| Ribosomal protein L4/L1e [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 270
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V ++KA +PGVE+ SV +L++L LAPG R +++++
Sbjct: 191 LRGRSKKVGKSVLFVTKDASKISKACGALPGVEVRSVKELSVLDLAPGSDPIRLTVYSKA 250
Query: 61 AFKKL 65
A +++
Sbjct: 251 AIEEI 255
>gi|47225873|emb|CAF98353.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPG 31
QRRGP ++Y +D G+TKAFRNIPG
Sbjct: 202 QRRGPCIIYNQDAGVTKAFRNIPG 225
>gi|393796607|ref|ZP_10379971.1| 50S ribosomal protein L4P [Candidatus Nitrosoarchaeum limnia BG20]
Length = 270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V + KA +PGVE +V L++L LAPG R I++++
Sbjct: 191 LRGRSKKVGKSVLFVTKDASKIIKACGTLPGVEARAVKDLSVLDLAPGSDPIRLTIYSKA 250
Query: 61 AFKKL 65
A +++
Sbjct: 251 ALEEI 255
>gi|332298912|ref|YP_004440834.1| 50S ribosomal protein L4/L1e [Treponema brennaborense DSM 12168]
gi|332182015|gb|AEE17703.1| ribosomal protein L4/L1e [Treponema brennaborense DSM 12168]
Length = 210
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 10 RGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALY 69
R +V+ D + +A RNIP V +S ++L L GR VI ESA K L Y
Sbjct: 150 RTVIVLKDDDANIKQAGRNIPAVSFLSYNRLRAHDL----FYGRKVIMLESAVKNLSGFY 205
Query: 70 GS 71
G
Sbjct: 206 GE 207
>gi|220928208|ref|YP_002505117.1| 50S ribosomal protein L4 [Clostridium cellulolyticum H10]
gi|254803726|sp|B8I7Y0.1|RL4_CLOCE RecName: Full=50S ribosomal protein L4
gi|219998536|gb|ACL75137.1| ribosomal protein L4/L1e [Clostridium cellulolyticum H10]
Length = 207
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 3 NRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAF 62
N ++ LV+ K+ + K+ RNIPG++ V+ LN+ + +F+I T+ A
Sbjct: 144 NNLKVDSSALLVIDSKNENIVKSARNIPGIKTAYVNTLNVFDIL---KYDKFII-TKDAV 199
Query: 63 KKLDALYG 70
+K++ +Y
Sbjct: 200 EKVEEVYA 207
>gi|329765067|ref|ZP_08256651.1| Ribosomal protein L4 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138444|gb|EGG42696.1| Ribosomal protein L4 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 108
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 22 LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKL 65
+ KA +PGVE +V L++L LAPG R I++++A +++
Sbjct: 50 IIKACGTLPGVEARAVKDLSVLDLAPGSDPIRLTIYSKAALEEI 93
>gi|194376602|dbj|BAG57447.1| unnamed protein product [Homo sapiens]
Length = 227
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 8 QRRGPLVVYGKDRGLTKAFRNIPG 31
QRRGP ++Y +D G+ KAFRNIPG
Sbjct: 203 QRRGPCIIYNEDNGIIKAFRNIPG 226
>gi|169830029|ref|YP_001700187.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
gi|226730684|sp|B1HMX9.1|RL4_LYSSC RecName: Full=50S ribosomal protein L4
gi|168994517|gb|ACA42057.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
Length = 207
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 7 IQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
++++ V D + + RNIPGV +++ + +N+L L GH V++T+SA +K++
Sbjct: 148 LEKKSLFVTADLDENVALSARNIPGVTVLTANGINVLDLL--GH--EKVVFTKSAVEKVE 203
Query: 67 ALYG 70
+ G
Sbjct: 204 EVLG 207
>gi|126654433|ref|ZP_01726173.1| 50S ribosomal protein L4 [Bacillus sp. B14905]
gi|126589120|gb|EAZ83317.1| 50S ribosomal protein L4 [Bacillus sp. B14905]
Length = 142
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 7 IQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLD 66
++++ V D + + RNIPGV +++ + +N+L L GH V++T+SA +K++
Sbjct: 83 LEKKSLFVTADLDENVALSARNIPGVTVLTANGINVLDLL--GH--EKVVFTKSAVEKVE 138
Query: 67 ALYG 70
+ G
Sbjct: 139 EVLG 142
>gi|118576053|ref|YP_875796.1| ribosomal protein L4 [Cenarchaeum symbiosum A]
gi|118194574|gb|ABK77492.1| ribosomal protein L4 [Cenarchaeum symbiosum A]
Length = 271
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R + + L V G D + +A PGV L++L LAPG R +++++
Sbjct: 190 LRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPARDLSVLDLAPGAEPARLTVYSKA 249
Query: 61 AFKKL 65
A + L
Sbjct: 250 AIESL 254
>gi|238683663|gb|ACR54110.1| ribosomal protein L4 [Palaemonetes varians]
Length = 114
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 70 GSWKTKAPLKKGYSLPQPKMANT 92
G+W+ K+ +KK Y+LP PKM NT
Sbjct: 1 GTWQKKSTMKKNYNLPMPKMTNT 23
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,549,943,389
Number of Sequences: 23463169
Number of extensions: 54057209
Number of successful extensions: 97494
Number of sequences better than 100.0: 821
Number of HSP's better than 100.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 96461
Number of HSP's gapped (non-prelim): 822
length of query: 97
length of database: 8,064,228,071
effective HSP length: 66
effective length of query: 31
effective length of database: 6,515,658,917
effective search space: 201985426427
effective search space used: 201985426427
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)