BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14782
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49165|RL4_URECA 60S ribosomal protein L4 OS=Urechis caupo GN=RPL4 PE=2 SV=1
Length = 386
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 77/92 (83%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR IQRRGPL++YG D G+++AFRNIPG+ L++V++LNLL +APGGHVGRF IWTES
Sbjct: 195 LRNRRAIQRRGPLIIYGTDNGISRAFRNIPGITLVNVNRLNLLSMAPGGHVGRFCIWTES 254
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AFK+LD +YG+WK + K Y+LP PKM NT
Sbjct: 255 AFKQLDNIYGTWKRPSAEKSHYNLPMPKMTNT 286
>sp|P09180|RL4_DROME 60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2
SV=2
Length = 401
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 72/82 (87%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GPLVVY KD GL KAFRNIPG+E I+V KLNLLKLAPGGHVGRFVIWTESAF +L+ L+G
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+WK + LKKGY+LPQPKMANT
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANT 290
>sp|Q5RCR3|RL4_PONAB 60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1
Length = 427
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>sp|P35679|RL4A_SCHPO 60S ribosomal protein L4-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl4a PE=1 SV=2
Length = 363
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +QRRGPLVV+ +D G+ KAFRNIPGVE+++V +LNLL+LAPGGH+GRFVIWT+S
Sbjct: 196 LRNRRHVQRRGPLVVFNEDAGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD+++GS A LKK Y LP+ ++N
Sbjct: 256 AFGLLDSVFGSTTEAAQLKKNYFLPENIISNA 287
>sp|P50878|RL4_RAT 60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3
Length = 421
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>sp|Q4R5P9|RL4_MACFA 60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1
Length = 427
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>sp|P36578|RL4_HUMAN 60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5
Length = 427
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMINT 287
>sp|Q9D8E6|RL4_MOUSE 60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3
Length = 419
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMMNT 287
>sp|P08429|RL4A_XENLA 60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-a PE=2 SV=2
Length = 396
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ GL KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>sp|Q58DW0|RL4_BOVIN 60S ribosomal protein L4 OS=Bos taurus GN=RPL4 PE=2 SV=3
Length = 422
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFRNIPG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>sp|Q9P784|RL4B_SCHPO 60S ribosomal protein L4-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl4b PE=3 SV=1
Length = 363
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 75/92 (81%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNRR +QRRGPLVV+ +D G+ KAFRNIPGVE+++V +LNLL+LAPGGH+GRFVIWT+S
Sbjct: 196 LRNRRHVQRRGPLVVFNEDTGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKS 255
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
AF LD+++GS A LKK Y LP+ ++N
Sbjct: 256 AFGLLDSVFGSTTEVAQLKKNYFLPENIISNA 287
>sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2
SV=1
Length = 406
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKD-RGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVVYG + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 201 MRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 261 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 293
>sp|P02385|RL4B_XENLA 60S ribosomal protein L4-B OS=Xenopus laevis GN=rpl4-b PE=2 SV=2
Length = 401
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP V+Y ++ G+ KAFRNIPG+ L++VSKLNLL+LAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 210 GPCVIYNENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYG 269
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 270 TWRKSAKLKADYNLPMHKMTNT 291
>sp|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1
Length = 408
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPL+VYG + L KAFRNIPG+++I+V +LNLLKLAPGGH+GRFV+WT+
Sbjct: 203 MRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKLAPGGHLGRFVVWTK 262
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAF+KLD++YGS+ + K GY LP+ KM N
Sbjct: 263 SAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVN 294
>sp|P49691|RL4B_ARATH 60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1
SV=2
Length = 407
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MRNRR I R+GPLVV+G + + KAFRN+PGVEL V +LNLLKLAPGGH+GRFVIWT+
Sbjct: 202 MRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTK 261
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMANT 92
SAF+KL+++YGS++ + KKGY LP+ KM N
Sbjct: 262 SAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNA 294
>sp|P0DJ55|RL4_TETTS 60S ribosomal protein L4 OS=Tetrahymena thermophila (strain SB210)
GN=RPL4 PE=1 SV=1
Length = 410
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRG-LTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
+RNRR RRGPLVVYG ++ LT+A RNIPGV++ +V++LNLL+LAPGGHVGRF+IWTE
Sbjct: 201 LRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNRLNLLQLAPGGHVGRFIIWTE 260
Query: 60 SAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
SAFKKL+ ++G++ T K GY L +P +AN
Sbjct: 261 SAFKKLNEIFGTYSTTGVQKSGYQLQRPLLAN 292
>sp|Q28346|RL4_CANFA 60S ribosomal protein L4 OS=Canis familiaris GN=RPL4 PE=1 SV=2
Length = 421
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 11 GPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYG 70
GP ++Y +D G+ KAFR PG+ L++VSKLN+LKLAPGGHVGRF IWTESAF+KLD LYG
Sbjct: 206 GPCIIYNEDNGIIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDLYG 265
Query: 71 SWKTKAPLKKGYSLPQPKMANT 92
+W+ A LK Y+LP KM NT
Sbjct: 266 TWRKAASLKSNYNLPMHKMLNT 287
>sp|O02056|RL4_CAEEL 60S ribosomal protein L4 OS=Caenorhabditis elegans GN=rpl-4 PE=1
SV=3
Length = 345
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+RNR+ Q+ GP+V+YG+D +AFRNIPGV++++V +LNLLKLAPGGH+GR +IWTES
Sbjct: 195 LRNRQHKQKLGPVVIYGQDAECARAFRNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTES 254
Query: 61 AFKKLDALYGSW-KTKAPLKKGYSLPQPKMANT 92
AFKKLD +YG+ + LKKG+S+P P MAN+
Sbjct: 255 AFKKLDTIYGTTVANSSQLKKGWSVPLPIMANS 287
>sp|P49626|RL4B_YEAST 60S ribosomal protein L4-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL4B PE=1 SV=2
Length = 362
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>sp|P10664|RL4A_YEAST 60S ribosomal protein L4-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL4A PE=1 SV=4
Length = 362
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR QRRGPLVVY +D G+ KA RN+PGVE +V+ LNLL+LAPG H+GRFVIWTE+A
Sbjct: 195 RNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAA 254
Query: 62 FKKLDALYGSWKTKAPLKKGYSLP 85
F KLD ++GS +T A K GY+LP
Sbjct: 255 FTKLDQVWGS-ETVASSKVGYTLP 277
>sp|Q54Z69|RL4_DICDI 60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1
SV=1
Length = 369
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 72/90 (80%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
RNRR R+GPLVV +++A RNIPGVE+ +VS+LNLLKLAPGGH+GRF+IWT+SA
Sbjct: 196 RNRRYKVRKGPLVVVSGKTTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSA 255
Query: 62 FKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
F++LD+ +G++ + KKGY+LP+P +AN
Sbjct: 256 FEQLDSTFGTFAKSSAQKKGYTLPRPMIAN 285
>sp|P49669|RL4_TRYBB 60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3
SV=1
Length = 374
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MRNRR + RRGP++V ++G T+AFRNI G++L +V+ LNLL LAPGGHVGRF+IWT+S
Sbjct: 195 MRNRRYVARRGPMLVMPDNKG-TRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKS 253
Query: 61 AFKKLDALYGSWKTKAPLKKGYSLPQPKMANTK-QRVM 97
AF+KLD ++G++ + +K G+ LP P + +T R+M
Sbjct: 254 AFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIM 291
>sp|O15594|RL4_ENTHI 60S ribosomal protein L4 (Fragments) OS=Entamoeba histolytica
GN=RPL4 PE=2 SV=2
Length = 245
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 1 MRNRRRIQRRGPLVVYGKDR-GLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ +R+GPLVVYG D KAFRNIPGV+ V L++L LAPG H+GRF+IW E
Sbjct: 150 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWPE 209
Query: 60 SAFKKLDALYGSWKTKAPLKKGY 82
SAFKKL+ +G+ K A G+
Sbjct: 210 SAFKKLNTTFGTQKEMAQGPSGF 232
>sp|P14117|RL4_XENTR 60S ribosomal protein L4 (Fragment) OS=Xenopus tropicalis GN=rpl4
PE=3 SV=1
Length = 96
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 32 VELISVSKLNLLKLAPGGHVGRFVIWTESAFKKLDALYGSWKTKAPLKKGYSLPQPKMAN 91
+ L++VSKLNLL+LA GGHVGRF IWTES+F+KLD LYG+W+ A LK Y+LP KM N
Sbjct: 1 ITLLNVSKLNLLRLALGGHVGRFCIWTESSFRKLDDLYGTWRKSAKLKADYNLPMHKMTN 60
Query: 92 T 92
T
Sbjct: 61 T 61
>sp|O26111|RL4_METTH 50S ribosomal protein L4P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl4p PE=3 SV=1
Length = 254
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ RGPL+V G D+G+T+ RN PGV+++ V LN LAPG H GR ++T S
Sbjct: 185 MRGRKYRTPRGPLIVVGDDKGITRGARNHPGVDVVRVENLNAELLAPGTHPGRLTVFTRS 244
Query: 61 AFKKLDALY 69
A +KLD L+
Sbjct: 245 AIEKLDELF 253
>sp|Q8TZZ9|RL4_PYRFU 50S ribosomal protein L4P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl4p PE=1 SV=1
Length = 255
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVLGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L LYG
Sbjct: 246 AIERLRELYG 255
>sp|Q9V1T6|RL4_PYRAB 50S ribosomal protein L4P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl4p PE=3 SV=1
Length = 255
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLKEIYG 255
>sp|Q5JDI0|RL4_PYRKO 50S ribosomal protein L4P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl4p PE=3 SV=1
Length = 255
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVEYLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>sp|C5A285|RL4_THEGJ 50S ribosomal protein L4P OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rpl4p PE=3 SV=1
Length = 255
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVDNLGVELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLKEIYG 255
>sp|B6YSL4|RL4_THEON 50S ribosomal protein L4P OS=Thermococcus onnurineus (strain NA1)
GN=rpl4p PE=3 SV=1
Length = 255
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV++++V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIVQGARNHPGVDVVTVENLGVELLAPGTHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>sp|O59420|RL4_PYRHO 50S ribosomal protein L4P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl4p PE=3 SV=1
Length = 255
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V GK+ G+ RN PGV+++ V L + LAPG H GR +WT S
Sbjct: 186 MRGRRYKKAKGPLIVVGKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRLTVWTVS 245
Query: 61 AFKKLDALYG 70
A ++L +YG
Sbjct: 246 AIERLREIYG 255
>sp|O28355|RL4_ARCFU 50S ribosomal protein L4P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl4p PE=3 SV=1
Length = 252
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR ++++ L+V GKD G+ KA +N+PGV+ + V LN+ LAPG H GR +WT+S
Sbjct: 183 MRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKS 242
Query: 61 AFKKLDALYGSW 72
A + L G W
Sbjct: 243 AVEYL----GEW 250
>sp|C6A160|RL4_THESM 50S ribosomal protein L4P OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rpl4p PE=3 SV=1
Length = 255
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR + +GPL+V K+ G+ + RN PGV+++ V L + LAPG H GR IWT+
Sbjct: 186 MRGRRYKKAKGPLIVVAKNEGIIQGARNHPGVDVVVVDNLGVELLAPGAHPGRLTIWTKG 245
Query: 61 AFKKLDALYG 70
A ++L YG
Sbjct: 246 AIERLREFYG 255
>sp|Q2NFV7|RL4_METST 50S ribosomal protein L4P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl4p PE=3 SV=1
Length = 259
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ +GPLVV G DRG++ RN GV+++ V+ +N LAPG H GR I+T+S
Sbjct: 186 LRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKS 245
Query: 61 AFKKLDALY 69
A +KL L+
Sbjct: 246 AIEKLGDLF 254
>sp|Q12ZV0|RL4_METBU 50S ribosomal protein L4P OS=Methanococcoides burtonii (strain DSM
6242) GN=rpl4p PE=3 SV=1
Length = 253
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ R+ L+V G++ L+KA N+PGV++ +V+ LN LAPG H GR +WT+SA
Sbjct: 185 RGRKYKNRKSVLIVTGEESLLSKAANNLPGVDVATVTALNAELLAPGTHAGRLTVWTQSA 244
Query: 62 FKKLDALY 69
++ ++
Sbjct: 245 ITNMEGMF 252
>sp|Q8PV49|RL4_METMA 50S ribosomal protein L4P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl4p PE=3 SV=1
Length = 253
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G++ + KA RN+ GV++++V LN LAPG H GR +WTES
Sbjct: 184 LRGRKYKHKKSVLIVAGENSPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A KL+ +
Sbjct: 244 AIGKLEGAF 252
>sp|Q8TRU6|RL4_METAC 50S ribosomal protein L4P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl4p PE=3
SV=1
Length = 253
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G++ + KA RN+ GV++++V LN LAPG H GR +WTES
Sbjct: 184 LRGRKYKHKKSVLIVAGENTPILKAARNLSGVDVVTVDSLNAELLAPGTHAGRLTVWTES 243
Query: 61 AFKKLDALY 69
A KL+ +
Sbjct: 244 AIGKLEGAF 252
>sp|A0B9W9|RL4_METTP 50S ribosomal protein L4P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl4p PE=3 SV=1
Length = 251
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR Q R L+V D G+ +A RN+PGV+ ++ +LN LAPG H GR +W+E
Sbjct: 183 IRGRRFRQPRSILIVAAADNGIGRAARNLPGVDFVTADRLNAELLAPGTHAGRLTVWSEP 242
Query: 61 AFKKLD 66
+ K L+
Sbjct: 243 SLKVLE 248
>sp|Q46G96|RL4_METBF 50S ribosomal protein L4P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl4p PE=3 SV=1
Length = 253
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R R+ ++ L+V G+ + KA RN+ GV++ +V LN LAPG H GR IWTES
Sbjct: 184 LRGRKYKHKKSVLIVAGESAPILKAARNLSGVDVATVDSLNAELLAPGTHAGRLTIWTES 243
Query: 61 AFKKLDALY 69
A +KL+ +
Sbjct: 244 AVEKLEGAF 252
>sp|A5UL88|RL4_METS3 50S ribosomal protein L4P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl4p PE=3 SV=1
Length = 254
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 2 RNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTESA 61
R R+ + +GPL+V G+D G+ RN GV++++V LN LAPG H GR I+T+SA
Sbjct: 186 RGRKYKKVKGPLLVVGEDNGIKLGARNHAGVDVVTVENLNAELLAPGTHPGRLTIFTKSA 245
Query: 62 FKKLDALY 69
+KL L+
Sbjct: 246 VEKLGGLF 253
>sp|P54015|RL4_METJA 50S ribosomal protein L4P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl4p PE=3 SV=1
Length = 252
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR R+ + R LVV G A RN+PGV++I+ L ++ LAPGG GR +WTES
Sbjct: 183 MRGRKYKKPRSILVVVGDKCNAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTES 242
Query: 61 AFKKL 65
A +KL
Sbjct: 243 ALEKL 247
>sp|C3NEE4|RL4_SULIY 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl4p PE=3 SV=1
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>sp|C3NHA8|RL4_SULIN 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl4p PE=3 SV=1
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>sp|A3CSZ8|RL4_METMJ 50S ribosomal protein L4P OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rpl4p PE=3 SV=1
Length = 249
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
MR RR QR+ L+V G + +A RN+ GV+ ++V +LN LAPG GR IWTES
Sbjct: 183 MRGRRYKQRKSVLIVTGGE--PLRAARNLAGVDAVAVDQLNAELLAPGTQAGRLTIWTES 240
Query: 61 AFKKLD 66
A ++L+
Sbjct: 241 AIRRLE 246
>sp|Q975I2|RL4_SULTO 50S ribosomal protein L4P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl4p PE=3 SV=2
Length = 266
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MRNRRRIQRRGPL-VVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + +GPL V++ + KA NIPGV++I S L+++ LAPGGH GR I+T+
Sbjct: 191 MRGRRYKEPKGPLFVIHENNPVFVKAASNIPGVDVILASDLSVIHLAPGGHPGRLTIYTK 250
Query: 60 SAFKKL 65
S+ L
Sbjct: 251 SSIDVL 256
>sp|Q2FU92|RL4_METHJ 50S ribosomal protein L4P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl4p PE=3 SV=1
Length = 249
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MRNRRRIQRRGPLVVYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTES 60
+R RR QR+ L+V GK+R +A RN+ GV++ V LN+ LAPG H R +WTE
Sbjct: 183 LRGRRYKQRKSLLIVTGKER--LRAARNLAGVDVCLVDNLNVELLAPGTHSARLTLWTED 240
Query: 61 AFKKL 65
A +KL
Sbjct: 241 AVRKL 245
>sp|C3MQ60|RL4_SULIL 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=rpl4p PE=3 SV=1
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGTHSGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>sp|Q8ZW51|RL4_PYRAE 50S ribosomal protein L4P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl4p PE=3 SV=1
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 1 MRNRRRIQRRGPLVVYGK-DRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR RR + + LVV + L A RN PGV++++V+ LN+L LAPGG GR +WT
Sbjct: 213 MRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTA 272
Query: 60 SAFKKLDALY 69
A +KL L+
Sbjct: 273 PAVEKLRGLF 282
>sp|C3MVH9|RL4_SULIM 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl4p PE=3 SV=1
Length = 267
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
>sp|C4KHF7|RL4_SULIK 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=rpl4p PE=3 SV=1
Length = 267
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MRNRRRIQRRGPLV-VYGKDRGLTKAFRNIPGVELISVSKLNLLKLAPGGHVGRFVIWTE 59
MR R+ + GPL+ V+ + + KA RNI GV++++ ++++ LAPG H GR I+TE
Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251
Query: 60 SAFKKLD 66
++ K LD
Sbjct: 252 TSIKILD 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,528,547
Number of Sequences: 539616
Number of extensions: 1294171
Number of successful extensions: 2654
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2569
Number of HSP's gapped (non-prelim): 124
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)