Your job contains 1 sequence.
>psy14785
MMANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIIS
EEKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYL
VGVPATFYLHHYLYTRGGQTGNRGSHHRNRGYAAIRKQVYPSDSEEDHHKTGNCKVWNVK
NGIGKLLQRALGSETHFRVDPLTPDCLELEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14785
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003279 - symbol:RpL4 "Ribosomal protein L4" speci... 233 3.8e-19 1
UNIPROTKB|Q5ZII1 - symbol:RPL4 "Uncharacterized protein" ... 171 3.2e-12 1
MGI|MGI:1915141 - symbol:Rpl4 "ribosomal protein L4" spec... 170 4.0e-12 1
UNIPROTKB|Q58DW0 - symbol:RPL4 "60S ribosomal protein L4"... 168 6.8e-12 1
UNIPROTKB|H3BM89 - symbol:RPL4 "Ribosomal protein L4, iso... 165 7.9e-12 1
TAIR|locus:2074904 - symbol:AT3G09630 species:3702 "Arabi... 165 1.3e-11 1
UNIPROTKB|E2R546 - symbol:RPL4 "60S ribosomal protein L4"... 165 1.4e-11 1
UNIPROTKB|Q6P3V9 - symbol:Rpl4 "Ribosomal protein L4" spe... 165 1.4e-11 1
UNIPROTKB|P36578 - symbol:RPL4 "60S ribosomal protein L4"... 165 1.5e-11 1
UNIPROTKB|G3MXR5 - symbol:G3MXR5 "Uncharacterized protein... 165 1.5e-11 1
RGD|619824 - symbol:Rpl4 "ribosomal protein L4" species:1... 164 1.8e-11 1
UNIPROTKB|F1SJJ5 - symbol:RPL4 "60S ribosomal protein L4"... 162 3.1e-11 1
UNIPROTKB|J9P0P0 - symbol:J9P0P0 "Uncharacterized protein... 161 3.9e-11 1
TAIR|locus:2151296 - symbol:AT5G02870 species:3702 "Arabi... 159 6.0e-11 1
UNIPROTKB|F1PVZ2 - symbol:RPL4 "60S ribosomal protein L4"... 159 6.5e-11 1
UNIPROTKB|J9JHV8 - symbol:RPL4 "60S ribosomal protein L4"... 159 6.5e-11 1
ZFIN|ZDB-GENE-030131-9034 - symbol:rpl4 "ribosomal protei... 149 5.6e-09 1
UNIPROTKB|Q28346 - symbol:RPL4 "60S ribosomal protein L4"... 140 1.6e-07 1
ASPGD|ASPL0000011665 - symbol:AN8176 species:162425 "Emer... 132 1.4e-06 1
UNIPROTKB|G4MZ86 - symbol:MGG_08190 "60S ribosomal protei... 123 1.8e-05 1
POMBASE|SPBC1711.06 - symbol:rpl401 "60S ribosomal protei... 113 0.00028 1
DICTYBASE|DDB_G0277803 - symbol:rpl4 "60S ribosomal prote... 112 0.00038 1
CGD|CAL0003773 - symbol:RPL4B species:5476 "Candida albic... 109 0.00084 1
UNIPROTKB|Q59ZX4 - symbol:RPL4B "Likely cytosolic ribosom... 109 0.00084 1
>FB|FBgn0003279 [details] [associations]
symbol:RpL4 "Ribosomal protein L4" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 EMBL:AE014297
GO:GO:0051298 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
KO:K02930 OMA:HTNMRKN InterPro:IPR025755 InterPro:IPR013000
Pfam:PF14374 PROSITE:PS00939 GeneTree:ENSGT00390000018145 CTD:6124
EMBL:X13382 EMBL:AY069485 EMBL:X06881 PIR:S02209 RefSeq:NP_524538.2
UniGene:Dm.2104 ProteinModelPortal:P09180 SMR:P09180 IntAct:P09180
MINT:MINT-844904 STRING:P09180 PaxDb:P09180 PRIDE:P09180
EnsemblMetazoa:FBtr0085248 GeneID:43349 KEGG:dme:Dmel_CG5502
FlyBase:FBgn0003279 InParanoid:P09180 OrthoDB:EOG4280H6
PhylomeDB:P09180 ChiTaRS:RPL4 GenomeRNAi:43349 NextBio:833481
Bgee:P09180 GermOnline:CG5502 Uniprot:P09180
Length = 401
Score = 233 (87.1 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 51/110 (46%), Positives = 71/110 (64%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
MANTDL+RLLKSEEI+KVLR P + V R+ R+LNPLTN R +++LNP+A+V R A ++
Sbjct: 287 MANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAA 346
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKR 111
EKR +A+ A+K+ V V A + K AR+ K+A K+
Sbjct: 347 EKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAKLLAARKKKVAAKK 396
>UNIPROTKB|Q5ZII1 [details] [associations]
symbol:RPL4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X EMBL:AADN02038915 EMBL:AJ720803 IPI:IPI00575596
RefSeq:NP_001007480.1 UniGene:Gga.4523 SMR:Q5ZII1 STRING:Q5ZII1
Ensembl:ENSGALT00000012495 GeneID:415551 KEGG:gga:415551
InParanoid:Q5ZII1 OMA:PEDKKSA NextBio:20819134 Uniprot:Q5ZII1
Length = 421
Score = 171 (65.3 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 45/124 (36%), Positives = 68/124 (54%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL R+L+S+EI+K LR P + + R K NPL N R+M++LNP+A+ R+ I+
Sbjct: 284 MTNTDLGRILRSQEIQKALRAPKKKIHRRVLKKNPLKNLRVMIKLNPYAKTMRRNTILRH 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYLV 121
+ + +E K A+ + S TSK+ L ++ K K A +K A K +K
Sbjct: 344 AQNQKLKEEKKAKAKA-SVTSKAKLSAK-----AQTKAKPA--SKTAGKAAAKGPAKAPA 395
Query: 122 GVPA 125
PA
Sbjct: 396 KAPA 399
>MGI|MGI:1915141 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 MGI:MGI:1915141
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0030529
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:AK008098 EMBL:AK011068
EMBL:BC003459 IPI:IPI00111412 RefSeq:NP_077174.1 UniGene:Mm.280083
ProteinModelPortal:Q9D8E6 SMR:Q9D8E6 IntAct:Q9D8E6
MINT:MINT-1859608 STRING:Q9D8E6 PhosphoSite:Q9D8E6 PaxDb:Q9D8E6
PRIDE:Q9D8E6 Ensembl:ENSMUST00000034966 GeneID:67891 KEGG:mmu:67891
InParanoid:Q9D8E6 NextBio:325862 Bgee:Q9D8E6 CleanEx:MM_RPL4
Genevestigator:Q9D8E6 GermOnline:ENSMUSG00000032399 Uniprot:Q9D8E6
Length = 419
Score = 170 (64.9 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYLV 121
+ R KL E + +KS VP +++K + ++ K + + K +V
Sbjct: 344 ARNHKLRVKKL-EAAATALATKSEKVVPEKGT-ADKKPAVGKKGKKVDAKKQKPAGKKVV 401
>UNIPROTKB|Q58DW0 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:BT021487 EMBL:BC102521
IPI:IPI00699827 RefSeq:NP_001014894.1 UniGene:Bt.48893
ProteinModelPortal:Q58DW0 SMR:Q58DW0 STRING:Q58DW0 PRIDE:Q58DW0
Ensembl:ENSBTAT00000006866 GeneID:510547 KEGG:bta:510547 CTD:6124
HOVERGEN:HBG001453 InParanoid:Q58DW0 OrthoDB:EOG483D4X
NextBio:20869503 Uniprot:Q58DW0
Length = 422
Score = 168 (64.2 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKL 107
+ R K A + K + G + ++ +++K + KL
Sbjct: 344 ARNHKIRMDKAAAALEAKSDQKGVQG--KKPVVGNKEKKAVGDKKL 387
>UNIPROTKB|H3BM89 [details] [associations]
symbol:RPL4 "Ribosomal protein L4, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0003735
EMBL:CH471082 GO:GO:0015934 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
ChiTaRS:RPL4 UniGene:Hs.186350 UniGene:Hs.644628 HGNC:HGNC:10353
EMBL:AC116913 SMR:H3BM89 Ensembl:ENST00000568588 Uniprot:H3BM89
Length = 333
Score = 165 (63.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 45/124 (36%), Positives = 67/124 (54%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 190 MINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 249
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYLV 121
+ R K A + +KS A ++ +K + ++ K A GV K LV
Sbjct: 250 ARNHKLRVDKAAAA-AAALQAKS----DEKAAVAGKKPVVGKKGKKAAV-GVKKQKKPLV 303
Query: 122 GVPA 125
G A
Sbjct: 304 GKKA 307
>TAIR|locus:2074904 [details] [associations]
symbol:AT3G09630 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005618 GO:GO:0009507 GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006412 EMBL:AC016661
GO:GO:0003735 GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 EMBL:AY056781 EMBL:BT002438 EMBL:BT008495
IPI:IPI00542248 RefSeq:NP_187574.1 UniGene:At.24636
ProteinModelPortal:Q9SF40 SMR:Q9SF40 IntAct:Q9SF40 STRING:Q9SF40
PaxDb:Q9SF40 PRIDE:Q9SF40 EnsemblPlants:AT3G09630.1 GeneID:820120
KEGG:ath:AT3G09630 GeneFarm:380 TAIR:At3g09630 HOGENOM:HOG000107331
InParanoid:Q9SF40 KO:K02930 OMA:HTNMRKN PhylomeDB:Q9SF40
ProtClustDB:PLN00185 Genevestigator:Q9SF40 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 Uniprot:Q9SF40
Length = 406
Score = 165 (63.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/85 (42%), Positives = 57/85 (67%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIR-GVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIIS 60
M N DLAR++ S+EI+ V+ PI+ +RA K NPL N +ML+LNP+A+ R ++++
Sbjct: 290 MVNADLARIINSDEIQSVVN-PIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLA 348
Query: 61 EEKRKLAREAKLAEKRGVSTTSKSL 85
E +R A++ KLA+KR T ++L
Sbjct: 349 EAQRVKAKKEKLAKKRKTVTKEEAL 373
>UNIPROTKB|E2R546 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
Ensembl:ENSCAFT00000008039 Uniprot:E2R546
Length = 412
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEK 110
K R K A + K + G + + + K+ + ++A +K
Sbjct: 344 AKNHKLRMDKAAAALEAKSEEKGVPG-KKPTVGKKGKKTVGKKAAATKK 391
>UNIPROTKB|Q6P3V9 [details] [associations]
symbol:Rpl4 "Ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 RGD:619824
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH473975
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 HOVERGEN:HBG001453 IPI:IPI00202512
UniGene:Rn.1133 EMBL:BC063811 EMBL:BC081801 SMR:Q6P3V9
STRING:Q6P3V9 Ensembl:ENSRNOT00000013461 InParanoid:Q6P3V9
Genevestigator:Q6P3V9 Uniprot:Q6P3V9
Length = 421
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + ++R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MMNTDLSRILKSPEIQRALRAPRKKIQRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAK 106
+ R KL E + +KS VP ++K + ++ K
Sbjct: 344 ARNHKLRVKKL-EAAAAALAAKSEKIVPEKGA-GDKKPAVGKKGK 386
>UNIPROTKB|P36578 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 EMBL:CH471082
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:L20868
EMBL:D23660 EMBL:AB061820 EMBL:AK291117 EMBL:AK291859 EMBL:BC001365
EMBL:BC005817 EMBL:BC007748 EMBL:BC007996 EMBL:BC009888
EMBL:BC010151 EMBL:BC014653 EMBL:BC066925 EMBL:BC095427
IPI:IPI00003918 PIR:T09551 RefSeq:NP_000959.2 UniGene:Hs.186350
UniGene:Hs.644628 ProteinModelPortal:P36578 SMR:P36578
DIP:DIP-27559N IntAct:P36578 MINT:MINT-1034893 STRING:P36578
PhosphoSite:P36578 DMDM:22002063 SWISS-2DPAGE:P36578 PaxDb:P36578
PRIDE:P36578 DNASU:6124 Ensembl:ENST00000307961 GeneID:6124
KEGG:hsa:6124 UCSC:uc002apv.3 GeneCards:GC15M066790 HGNC:HGNC:10353
HPA:HPA034600 MIM:180479 neXtProt:NX_P36578 PharmGKB:PA34749
InParanoid:P36578 PhylomeDB:P36578 GenomeRNAi:6124 NextBio:23787
PMAP-CutDB:P36578 ArrayExpress:P36578 Bgee:P36578 CleanEx:HS_RPL4
Genevestigator:P36578 GermOnline:ENSG00000174444 Uniprot:P36578
Length = 427
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/124 (36%), Positives = 67/124 (54%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYLV 121
+ R K A + +KS A ++ +K + ++ K A GV K LV
Sbjct: 344 ARNHKLRVDKAAAA-AAALQAKS----DEKAAVAGKKPVVGKKGKKAAV-GVKKQKKPLV 397
Query: 122 GVPA 125
G A
Sbjct: 398 GKKA 401
>UNIPROTKB|G3MXR5 [details] [associations]
symbol:G3MXR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 InterPro:IPR025755 Pfam:PF14374
GeneTree:ENSGT00390000018145 EMBL:DAAA02048433
Ensembl:ENSBTAT00000000730 OMA:YAICSEL Uniprot:G3MXR5
Length = 436
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 298 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 357
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKL 107
+ R K A + K + G + ++ +++K KL
Sbjct: 358 ARNHKIRMDKAAAAVEAKSDQKGVQG--KKPVVGNKEKKAVGNKKL 401
>RGD|619824 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 RGD:619824 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X EMBL:X82180 IPI:IPI00202512
PIR:JC4277 RefSeq:NP_071955.1 UniGene:Rn.1133
ProteinModelPortal:P50878 SMR:P50878 IntAct:P50878 STRING:P50878
PhosphoSite:P50878 PRIDE:P50878 GeneID:64302 KEGG:rno:64302
UCSC:RGD:619824 InParanoid:P50878 NextBio:612934
ArrayExpress:P50878 Genevestigator:P50878
GermOnline:ENSRNOG00000009378 Uniprot:P50878
Length = 421
Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAK 106
+ R KL E + +KS VP ++K + ++ K
Sbjct: 344 ARNHKLRVKKL-EAAAAALAAKSEKIVPEKGA-GDKKPAVGKKGK 386
>UNIPROTKB|F1SJJ5 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:CU407297
Ensembl:ENSSSCT00000005457 Uniprot:F1SJJ5
Length = 426
Score = 162 (62.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 47/124 (37%), Positives = 64/124 (51%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+ KS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRI-KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 342
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVPRSAIISEEKRKLAREAKLAEKRGVSTTSKYLV 121
+ R K A + K GVP + E+K K A K GV K LV
Sbjct: 343 ARNHKIRMDKAAAALKAKSGEK---GVPDKKPVVEKKGKKAIGKKAV---GVKKQKKPLV 396
Query: 122 GVPA 125
G A
Sbjct: 397 GKKA 400
>UNIPROTKB|J9P0P0 [details] [associations]
symbol:J9P0P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03014418
Ensembl:ENSCAFT00000016777 OMA:IRENKRA Uniprot:J9P0P0
Length = 422
Score = 161 (61.7 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLG 87
K R + A + K +LG
Sbjct: 344 AKNHKLRMDQAAAALEAKSEEKGVLG 369
>TAIR|locus:2151296 [details] [associations]
symbol:AT5G02870 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AL162973
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 ProtClustDB:PLN00185
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
EMBL:AY054479 EMBL:AY059886 EMBL:AY062452 EMBL:AY093384
EMBL:AY114639 EMBL:AY136320 EMBL:BT002088 EMBL:Z18118 EMBL:Z18460
EMBL:Z17589 IPI:IPI00521292 PIR:T48308 RefSeq:NP_195907.1
UniGene:At.21294 ProteinModelPortal:P49691 SMR:P49691 IntAct:P49691
STRING:P49691 PaxDb:P49691 PRIDE:P49691 ProMEX:P49691
EnsemblPlants:AT5G02870.1 GeneID:831756 KEGG:ath:AT5G02870
GeneFarm:381 TAIR:At5g02870 InParanoid:P49691 OMA:HRRVNIT
PhylomeDB:P49691 Genevestigator:P49691 GermOnline:AT5G02870
Uniprot:P49691
Length = 407
Score = 159 (61.0 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIR-GVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIIS 60
M N DLAR++ S+E++ V+ PI+ G +RA K NPL N +M +LNP+A+ R ++++
Sbjct: 291 MVNADLARIINSDEVQSVVN-PIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLA 349
Query: 61 EEKRKLAREAKLAEKRGVSTTSKS 84
E R A++ KL +KR V T ++
Sbjct: 350 EASRVKAKKEKLEKKRKVVTKEEA 373
>UNIPROTKB|F1PVZ2 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
ProteinModelPortal:F1PVZ2 Ensembl:ENSCAFT00000027421 Uniprot:F1PVZ2
Length = 422
Score = 159 (61.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVP-RSAIISEEKRK 100
K R K A + K GVP + + ++ +K
Sbjct: 344 AKNHKLRMDKAAAALEAKSEEK---GVPGKKPTVGKKGKK 380
>UNIPROTKB|J9JHV8 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 OMA:HRRVNIT EMBL:AAEX03015186
RefSeq:XP_003640018.1 Ensembl:ENSCAFT00000018127 GeneID:100856765
KEGG:cfa:100856765 Uniprot:J9JHV8
Length = 422
Score = 159 (61.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LKS EI++ LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGVP-RSAIISEEKRK 100
K R K A + K GVP + + ++ +K
Sbjct: 344 AKNHKLRMDKAAAALEAKSEEK---GVPGKKPTVGKKGKK 380
>ZFIN|ZDB-GENE-030131-9034 [details] [associations]
symbol:rpl4 "ribosomal protein L4" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 ZFIN:ZDB-GENE-030131-9034 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
Pfam:PF14374 GeneTree:ENSGT00390000018145 CTD:6124
HOVERGEN:HBG001453 EMBL:CT863714 EMBL:BX927065 EMBL:BC049520
EMBL:BC067580 IPI:IPI00505526 RefSeq:NP_998272.1 UniGene:Dr.35139
SMR:Q7ZW95 STRING:Q7ZW95 Ensembl:ENSDART00000060363 GeneID:337090
KEGG:dre:337090 InParanoid:Q7ZW95 NextBio:20812054 Uniprot:Q7ZW95
Length = 375
Score = 149 (57.5 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M+ TDL R++KSEE++K +R R + R K NPL N R+M++LNP+A+ R AI++
Sbjct: 284 MSITDLNRIIKSEEVQKAIRPANRKINRRVFKKNPLKNLRVMMKLNPYAKTARRRAIMAH 343
Query: 62 EKRKLAREAKLAEKRGVSTT-SKSLLGVPRSA 92
A+ K +KR V T +K P A
Sbjct: 344 NPDVKAKMLKPKKKRVVKKTKAKKAEATPAQA 375
>UNIPROTKB|Q28346 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166 PDB:2ZKR
PDBsum:2ZKR HOGENOM:HOG000107331 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 HOVERGEN:HBG001453
EMBL:X99909 ProteinModelPortal:Q28346 SMR:Q28346 STRING:Q28346
PRIDE:Q28346 InParanoid:Q28346 EvolutionaryTrace:Q28346
Uniprot:Q28346
Length = 421
Score = 140 (54.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 2 MANTDLARLLKSEEIKKVLRRPIRGVRRASRKLNPLTNKRMMLRLNPFAQVTIRSAIISE 61
M NTDL+R+LK + LR P + + R K NPL N R+ML+LNP+A+ R+ I+ +
Sbjct: 284 MLNTDLSRILKMPRDPRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQ 343
Query: 62 EKRKLAREAKLAEKRGVSTTSKSLLGV-PR 90
K R K A + K + G PR
Sbjct: 344 AKNHKLRMDKAAAALEAKSEEKGVPGKKPR 373
>ASPGD|ASPL0000011665 [details] [associations]
symbol:AN8176 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
GO:GO:0006412 GO:GO:0005840 EMBL:BN001302 GO:GO:0003735
EMBL:AACD01000141 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
OrthoDB:EOG4GF6PS RefSeq:XP_681445.1 ProteinModelPortal:Q5AU54
SMR:Q5AU54 STRING:Q5AU54 EnsemblFungi:CADANIAT00004216
GeneID:2869238 KEGG:ani:AN8176.2 Uniprot:Q5AU54
Length = 372
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 1 MMANTDLARLLKSEEIKKVLRRPIRGVRRASR----KLNPLTNKRMMLRLNPFA 50
++AN DLARL+ S EI+ VLR P +G R R K NPL NK++MLRLNP+A
Sbjct: 288 LVANADLARLINSSEIQSVLRAP-KGEARTKRANVQKKNPLRNKQVMLRLNPYA 340
>UNIPROTKB|G4MZ86 [details] [associations]
symbol:MGG_08190 "60S ribosomal protein L4-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001232 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_003715166.1 ProteinModelPortal:G4MZ86 SMR:G4MZ86
EnsemblFungi:MGG_08190T0 GeneID:2678306 KEGG:mgr:MGG_08190
Uniprot:G4MZ86
Length = 371
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 1 MMANTDLARLLKSEEIKKVLRRPIRGVRRASR----KLNPLTNKRMMLRLNPFAQVTIRS 56
+++ DL RL+ S EI+ VLR P +G R R K NPL NK+++LRLNP+A ++
Sbjct: 288 VVSQADLTRLINSSEIQSVLRAP-KGTARTKRQGCLKKNPLRNKQILLRLNPYASAYQKN 346
Query: 57 AIISEEKRKLAREAK 71
+ EEK RE K
Sbjct: 347 KL-GEEK---LREGK 357
>POMBASE|SPBC1711.06 [details] [associations]
symbol:rpl401 "60S ribosomal protein L4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 PomBase:SPBC1711.06 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
RefSeq:NP_595879.1 ProteinModelPortal:Q9P784 SMR:Q9P784
STRING:Q9P784 PRIDE:Q9P784 EnsemblFungi:SPBC1711.06.1
GeneID:2539780 KEGG:spo:SPBC1711.06 OMA:QGARNHP NextBio:20800929
Uniprot:Q9P784
Length = 363
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 1 MMANTDLARLLKSEEIKKVLRR--PIRGVRRAS-RKLNPLTNKRMMLRLNPFAQVTIRSA 57
+++N D+ RL+ S+EI+ +++ P R V+RA +K NPL NK ++ RLNP+A+ +
Sbjct: 283 IISNADVTRLINSDEIQSIVKAAGPSR-VKRAHVQKKNPLKNKAVLSRLNPYAKAYKANV 341
Query: 58 IISEEKR-KLAREAKLA 73
I+ EK K A E L+
Sbjct: 342 KINSEKTPKAAGEKFLS 358
>DICTYBASE|DDB_G0277803 [details] [associations]
symbol:rpl4 "60S ribosomal protein L4" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
dictyBase:DDB_G0277803 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000022 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HSSP:P49626 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_642484.1 ProteinModelPortal:Q54Z69 SMR:Q54Z69
STRING:Q54Z69 PRIDE:Q54Z69 EnsemblProtists:DDB0231241
GeneID:8621195 KEGG:ddi:DDB_G0277803 ProtClustDB:PTZ00428
Uniprot:Q54Z69
Length = 369
Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 1 MMANTDLARLLKSEEIKKVLRRPIRGVRRAS---RKLNPLTNKRMMLRLNPFAQVTIRSA 57
M+AN D+ RL+ S+EI+ +R V+R + R+ NPL N R M++LNP A T R+
Sbjct: 282 MIANADIVRLVNSDEIQAAVRASKVVVKRPTAPVRRSNPLKNLRAMIKLNPAAVSTRRTQ 341
Query: 58 IISEEKR--KLAREAKLAEKRGVST 80
+ S + + K++++ +L K +T
Sbjct: 342 VKSLKSKGIKVSKKNQLRAKLVAAT 366
>CGD|CAL0003773 [details] [associations]
symbol:RPL4B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773 GO:GO:0009986
GO:GO:0016020 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 109 (43.4 bits), Expect = 0.00084, P = 0.00084
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 1 MMANTDLARLLKSEEIKKVLRRPIRGVRRASR--KLNPLTNKRMMLRLNPFAQV----TI 54
+++NTD+ RL+ S E++ V+R ++ S K NPL NK+++LRLNP+A+ +
Sbjct: 281 IISNTDVTRLINSAEVQAVVRPAGEKTQKKSHVLKKNPLKNKQVLLRLNPYAKAYAAEKV 340
Query: 55 RSAIISEEKRKLAREAKLAE 74
SA + + K K ++ + AE
Sbjct: 341 GSAKVEQAKVKPSK-GQFAE 359
>UNIPROTKB|Q59ZX4 [details] [associations]
symbol:RPL4B "Likely cytosolic ribosomal protein L4"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773
GO:GO:0009986 GO:GO:0016020 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 109 (43.4 bits), Expect = 0.00084, P = 0.00084
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 1 MMANTDLARLLKSEEIKKVLRRPIRGVRRASR--KLNPLTNKRMMLRLNPFAQV----TI 54
+++NTD+ RL+ S E++ V+R ++ S K NPL NK+++LRLNP+A+ +
Sbjct: 281 IISNTDVTRLINSAEVQAVVRPAGEKTQKKSHVLKKNPLKNKQVLLRLNPYAKAYAAEKV 340
Query: 55 RSAIISEEKRKLAREAKLAE 74
SA + + K K ++ + AE
Sbjct: 341 GSAKVEQAKVKPSK-GQFAE 359
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 211 0.00081 112 3 11 22 0.38 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 591 (63 KB)
Total size of DFA: 150 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.52u 0.10s 19.62t Elapsed: 00:00:01
Total cpu time: 19.52u 0.10s 19.62t Elapsed: 00:00:02
Start: Thu Aug 15 11:51:49 2013 End: Thu Aug 15 11:51:51 2013