Diaphorina citri psyllid: psy147

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MNFQQGGGGQFPQQGPRKLLKQRVFHKDGPAMTSTPYQTYNPPPPPGFSVTPQLNDDWAQDATPQFQSANMYNTYNAPNQFQPQLQPQQQFAQTPFMMPQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQVGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFVALSQPVLMLWVSYHLISSSTPLDPSVKSAPL
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcHHHHHHHHHHHHccccccccEEECccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHcccccccccccccccccc
******************************************************************************************************TNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQVGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETP***********************TKRRMYFLVFVALSQPVLMLWVSYHLISSS************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxx
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MNFQQGGGGQFPQQGPRKLLKQRVFHKDGPAMTSTPYQTYNPPPPPGFSVTPQLNDDWAQDATPQFQSANMYNTYNAPNQFQPQLQPQQQFAQTPFMMPQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQVGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFVALSQPVLMLWVSYHLISSSTPLDPSVKSAPL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein YIF1B confidentQ6P301
Protein YIF1B confidentQ5BJH7
Protein YIF1B confidentQ9CX30

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005793 [CC]endoplasmic reticulum-Golgi intermediate compartmentprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0030173 [CC]integral to Golgi membraneprobableGO:0043229, GO:0031301, GO:0031300, GO:0005622, GO:0043227, GO:0043226, GO:0031224, GO:0005737, GO:0005575, GO:0031090, GO:0016021, GO:0016020, GO:0044431, GO:0005794, GO:0012505, GO:0043231, GO:0044464, GO:0031228, GO:0005623, GO:0000139, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0044765 [BP]single-organism transportprobableGO:0051234, GO:0006810, GO:0008150, GO:0051179, GO:0044699
GO:0051649 [BP]establishment of localization in cellprobableGO:0009987, GO:0008150, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 61-73
View the alignment between query and template
View the model in PyMOL