BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14814
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ DM+++ I A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ DM+++ + A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ DM+++ + A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ DM+++ + A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ DM+++ + A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++ + A A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETRHFIYFYLGQVAILLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 67/82 (81%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++++ A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM DM+++ + A A+ K+ +EKDIA YIK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++A+L+FKSG
Sbjct: 68 HETKHFIYFYLGQVAVLLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 66/82 (80%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++ + A A+ KY +EKDIA +IK + DK Y PTWHCIVGRNFGS+VT
Sbjct: 8 IKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL ++AIL+FKSG
Sbjct: 68 HETRHFIYFYLGQVAILLFKSG 89
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 63/82 (76%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IKA DM+ M++E I A A+ K+ +EKDIA +IK + DK + PTWHCIVGRNFGSFVT
Sbjct: 4 IKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFVT 63
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HES +F+YFYL +A L+FKSG
Sbjct: 64 HESRHFIYFYLGTVAFLLFKSG 85
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 66/87 (75%)
Query: 9 SKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNF 68
S IK +DM+ +M+ + + A A+ KY +EKDIA YIK + D+ + PTWHCIVGRNF
Sbjct: 5 SSKAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNF 64
Query: 69 GSFVTHESGNFLYFYLDKIAILVFKSG 95
GS+VTHE+ +F+YFYL ++AIL+FKSG
Sbjct: 65 GSYVTHETKHFIYFYLGQVAILLFKSG 91
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 62/82 (75%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM+ +M+++ I A AI K+ +EKDIA IK D+ Y PTWHCIVGR+FGS+VT
Sbjct: 8 IKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKDFDRKYHPTWHCIVGRHFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ NF+YFYLD A L+FKSG
Sbjct: 68 HETHNFIYFYLDDRAFLLFKSG 89
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 62/82 (75%)
Query: 13 KIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFV 72
+IK+ DM+ DM++E + A +A+ KY +EKDIA YIK + D TWHC+VGRNFGSFV
Sbjct: 12 QIKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFGSFV 71
Query: 73 THESGNFLYFYLDKIAILVFKS 94
THE+ +F+YFYL AIL+FK+
Sbjct: 72 THETKHFIYFYLGHCAILLFKT 93
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 62/82 (75%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
IK +DM DM++ + A A+ KY++EKD+A YIK + D+ Y P WHCIVG++FGS+VT
Sbjct: 8 IKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGKHFGSYVT 67
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ +F+YFYL + A L+FKSG
Sbjct: 68 HETQHFIYFYLQERAFLLFKSG 89
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
+KASD+ +M+ + +A++ YK+EKDIA Y+K +LD+ Y TWH IVG++FGS+VT
Sbjct: 10 LKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIVGKSFGSYVT 69
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE G F YFY+ ++A L+FKSG
Sbjct: 70 HEQGFFTYFYIGQLAFLIFKSG 91
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 9 SKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNF 68
SKP +KASD+T ++ E + +A A YK+E++IA YIK QLD + TWH IVG+NF
Sbjct: 2 SKPV-LKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNF 60
Query: 69 GSFVTHESGNFLYFYLDKIAILVFKSG 95
GS+VTHE G F+YFY+ +A LVFK+
Sbjct: 61 GSYVTHEKGYFVYFYIGPLAFLVFKTA 87
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 63/86 (73%)
Query: 9 SKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNF 68
SKP +KASD+T ++ E + A+ ++++E+++A YIK +LD + TWH IVG+NF
Sbjct: 2 SKPAILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNF 61
Query: 69 GSFVTHESGNFLYFYLDKIAILVFKS 94
GS+VTHE G+F+YFY+ +A LVFK+
Sbjct: 62 GSYVTHEKGHFIYFYIGPLAFLVFKT 87
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 4 ADNVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCI 63
+D S P +KASD+T ++++ + ++DA+ KY++E+DIA +K QLD Y TWH I
Sbjct: 2 SDENKSTPI-VKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVI 60
Query: 64 VGRNFGSFVTHESGNFLYFYLDKIAILVFKS 94
VG+NFGS+VTHE G+F+YFY+ +A LVFK+
Sbjct: 61 VGKNFGSYVTHEKGHFVYFYIGPLAFLVFKT 91
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
+KASDM +M++E R A++A+ ++ +E++IA IK ++D Y TWH IVGR+FGS+VT
Sbjct: 6 VKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGSYVT 65
Query: 74 HESGNFLYFYLDKIAILVFKS 94
HE G F+YFY+ +A+LVFK+
Sbjct: 66 HEKGKFVYFYVGPLALLVFKT 86
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 59/82 (71%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVT 73
+K +DM M+++ A + +E+DIAM IK + DK Y PTWHCIVG++FGSFVT
Sbjct: 10 VKNADMPDFMQQDATECTIKAFEETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFGSFVT 69
Query: 74 HESGNFLYFYLDKIAILVFKSG 95
HE+ NF+YF ++K ++L+FK+G
Sbjct: 70 HETKNFIYFNINKHSVLLFKAG 91
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%)
Query: 13 KIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFV 72
++K +DM I ++A Y ++KD+A ++K +LDK + TWH I G+ FGS V
Sbjct: 7 EVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRV 66
Query: 73 THESGNFLYFYLDKIAILVFKSG 95
++E G+F+ +K+ ++++K G
Sbjct: 67 SYEMGHFILLKCNKVNVMIYKCG 89
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 13 KIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTY-------EPTWHCIVG 65
KI S M E++ ++ A A+ KY+ KDIA YIK + DK Y E +HCIVG
Sbjct: 22 KIITSYMPESFEQDAVQIALIAVDKYRQLKDIAFYIKHEYDKKYPGSGKATEGVYHCIVG 81
Query: 66 RNFGSFVTHESGNFLYFYLDKIAILVFKS 94
++F S V+HE+ F++ +D ++++KS
Sbjct: 82 KSFASAVSHETRQFIHMKVDTYHVILWKS 110
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 2 ADADNVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKD-IAMYIKTQLDKTYEPTW 60
AD + + P ++ SDM +M ET+ A K+ + A IK +DK + +W
Sbjct: 11 ADYKRLQTFPL-VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSW 69
Query: 61 HCIVGRNFGSFVTHESGNFLYFYL-DKIAILVFKS 94
H ++G FG +THE N LY Y +A+ V+K
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 2 ADADNVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKD-IAMYIKTQLDKTYEPTW 60
AD + + P ++ SDM +M ET+ A K+ + A IK +DK + +W
Sbjct: 11 ADYKRLQTFPL-VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSW 69
Query: 61 HCIVGRNFGSFVTHESGNFLYFYL-DKIAILVFKS 94
H ++G FG +THE N LY Y +A+ V+K
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 2 ADADNVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKD-IAMYIKTQLDKTYEPTW 60
AD + + P ++ SDM +M ET+ A K+ + A IK +DK + +W
Sbjct: 11 ADYKRLQTFPL-VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSW 69
Query: 61 HCIVGRNFGSFVTHESGNFLYFYL-DKIAILVFKS 94
H ++G FG +THE N LY Y +A+ V+K
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 2 ADADNVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKD-IAMYIKTQLDKTYEPTW 60
AD + + P ++ SDM +M ET+ A K+ + A IK +DK + +W
Sbjct: 11 ADYKRLQTFPL-VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSW 69
Query: 61 HCIVGRNFGSFVTHESGNFLYFYL-DKIAILVFKS 94
H ++G FG +THE N LY Y +A+ V+K
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWKC 104
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 6 NVHSKPTKIKASDMTVDMEKETIRFAQDAIAKYK-----------VEKDIAMYIKTQLDK 54
N S T ++ V + +E FAQ+A+A ++ +K+I +++ + D
Sbjct: 453 NYLSTETDVEDFRQCVRLSREI--FAQEALAPFRGKELQPGSHVQSDKEIDAFVRAKADS 510
Query: 55 TYEPTWHCIVGRN 67
Y P+ C +GR+
Sbjct: 511 AYHPSCTCKMGRS 523
>sp|A9VM74|MENE_BACWK 2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis
(strain KBAB4) GN=menE PE=3 SV=1
Length = 481
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 14 IKASDMTVDMEKETIRFAQDAIAKYKVEK 42
+K+ D+T E+E IRF ++ +AKYKV K
Sbjct: 428 VKSGDVT---EEEIIRFCEEKLAKYKVPK 453
>sp|P16379|L_VSNJO RNA-directed RNA polymerase L OS=Vesicular stomatitis New Jersey
virus (strain Ogden subtype Concan) GN=L PE=2 SV=2
Length = 2109
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 19 MTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFGSFVTHESGN 78
+T+DME QD++ YK+E + Y+ L+ C++ + +G+++ + N
Sbjct: 1759 ITMDME------VQDSVISYKIESLVRQYVPVLLESD-----GCLIYKTYGTYIATQEDN 1807
Query: 79 FL 80
L
Sbjct: 1808 SL 1809
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,411,980
Number of Sequences: 539616
Number of extensions: 1255834
Number of successful extensions: 3056
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3022
Number of HSP's gapped (non-prelim): 37
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)