RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14814
         (100 letters)



>d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly
          (Drosophila melanogaster) [TaxId: 7227]}
          Length = 87

 Score =  119 bits (300), Expect = 1e-37
 Identities = 49/86 (56%), Positives = 67/86 (77%)

Query: 10 KPTKIKASDMTVDMEKETIRFAQDAIAKYKVEKDIAMYIKTQLDKTYEPTWHCIVGRNFG 69
          +   IK +DM+ +M+++ +  A  A+ KY +EKDIA YIK + DK Y PTWHCIVGRNFG
Sbjct: 2  RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 61

Query: 70 SFVTHESGNFLYFYLDKIAILVFKSG 95
          S+VTHE+ +F+YFYL ++AIL+FKSG
Sbjct: 62 SYVTHETRHFIYFYLGQVAILLFKSG 87


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0675    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 360,234
Number of extensions: 14256
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 4
Length of query: 100
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 38
Effective length of database: 1,556,336
Effective search space: 59140768
Effective search space used: 59140768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)