Query psy14815
Match_columns 479
No_of_seqs 751 out of 3762
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 21:32:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-47 4.4E-52 360.9 42.4 316 2-354 6-323 (345)
2 2ynn_A Coatomer subunit beta'; 100.0 3.6E-46 1.2E-50 344.7 38.4 278 1-348 3-283 (304)
3 1vyh_C Platelet-activating fac 100.0 4.7E-46 1.6E-50 358.5 37.3 279 4-354 101-399 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 9.9E-45 3.4E-49 340.6 40.4 283 2-311 46-340 (340)
5 3ow8_A WD repeat-containing pr 100.0 3.4E-45 1.1E-49 340.5 36.5 281 4-354 25-309 (321)
6 2pbi_B Guanine nucleotide-bind 100.0 1.2E-43 4.1E-48 334.8 39.8 287 2-311 55-354 (354)
7 1nr0_A Actin interacting prote 100.0 3.8E-43 1.3E-47 355.7 41.6 328 3-354 51-510 (611)
8 2hes_X YDR267CP; beta-propelle 100.0 7.8E-43 2.7E-47 326.1 38.6 300 2-354 5-316 (330)
9 1nr0_A Actin interacting prote 100.0 4.8E-43 1.6E-47 354.9 39.6 326 3-354 139-599 (611)
10 3frx_A Guanine nucleotide-bind 100.0 2.7E-42 9.2E-47 320.9 38.4 287 2-354 8-305 (319)
11 3iz6_a 40S ribosomal protein R 100.0 1.9E-43 6.6E-48 336.9 31.2 290 3-316 58-377 (380)
12 4ery_A WD repeat-containing pr 100.0 3.8E-42 1.3E-46 319.1 38.7 282 2-354 14-298 (312)
13 4g56_B MGC81050 protein; prote 100.0 1.9E-42 6.4E-47 326.9 36.4 287 5-316 36-345 (357)
14 4gqb_B Methylosome protein 50; 100.0 3.1E-42 1.1E-46 322.9 35.6 287 7-353 26-318 (344)
15 2ymu_A WD-40 repeat protein; u 100.0 1.3E-41 4.5E-46 342.9 42.1 305 3-354 254-568 (577)
16 2xzm_R RACK1; ribosome, transl 100.0 1.2E-41 4.1E-46 320.1 38.4 295 2-354 12-328 (343)
17 3ow8_A WD repeat-containing pr 100.0 7.9E-42 2.7E-46 317.7 34.8 248 4-313 73-320 (321)
18 1vyh_C Platelet-activating fac 100.0 1.2E-41 4.2E-46 327.7 34.6 249 3-313 142-410 (410)
19 2pm7_B Protein transport prote 100.0 8.6E-41 2.9E-45 307.6 36.3 260 4-314 2-285 (297)
20 2ymu_A WD-40 repeat protein; u 100.0 2.1E-40 7.1E-45 334.1 41.4 305 3-354 213-527 (577)
21 1erj_A Transcriptional repress 100.0 9.5E-41 3.3E-45 319.8 36.3 298 9-346 62-363 (393)
22 4gqb_B Methylosome protein 50; 100.0 3.6E-40 1.2E-44 308.9 36.4 250 9-316 80-333 (344)
23 3bg1_A Protein SEC13 homolog; 100.0 1E-40 3.5E-45 309.8 28.4 263 4-314 6-293 (316)
24 4aow_A Guanine nucleotide-bind 100.0 4.8E-39 1.6E-43 301.8 38.7 294 2-354 29-325 (340)
25 3vl1_A 26S proteasome regulato 100.0 8.5E-40 2.9E-44 316.3 33.2 308 12-348 57-398 (420)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.8E-39 2.3E-43 301.4 37.9 266 7-316 57-337 (345)
27 3frx_A Guanine nucleotide-bind 100.0 7.4E-39 2.5E-43 297.7 35.8 249 3-315 57-318 (319)
28 1r5m_A SIR4-interacting protei 100.0 4.2E-39 1.4E-43 311.5 33.9 316 5-354 37-413 (425)
29 1gxr_A ESG1, transducin-like e 100.0 1.8E-38 6E-43 297.3 36.5 308 10-354 8-325 (337)
30 3zwl_B Eukaryotic translation 100.0 2.1E-38 7.3E-43 300.6 37.4 282 3-354 24-334 (369)
31 4e54_B DNA damage-binding prot 100.0 9.8E-40 3.3E-44 317.2 28.6 287 4-354 112-419 (435)
32 3dm0_A Maltose-binding peripla 100.0 5.1E-39 1.7E-43 330.6 35.5 287 3-354 374-681 (694)
33 2pm9_A Protein WEB1, protein t 100.0 1E-39 3.4E-44 315.3 27.1 322 10-354 11-402 (416)
34 3ei3_B DNA damage-binding prot 100.0 3.9E-39 1.3E-43 307.8 30.9 300 3-354 65-371 (383)
35 1sq9_A Antiviral protein SKI8; 100.0 1.2E-38 3.9E-43 306.0 33.2 286 3-315 8-396 (397)
36 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-38 5.6E-43 302.0 33.8 295 6-354 3-349 (372)
37 1got_B GT-beta; complex (GTP-b 100.0 7E-38 2.4E-42 293.9 37.1 269 48-354 60-331 (340)
38 2hes_X YDR267CP; beta-propelle 100.0 4.1E-38 1.4E-42 294.2 34.9 265 5-314 50-328 (330)
39 3jrp_A Fusion protein of prote 100.0 2.1E-38 7.2E-43 301.8 33.2 267 3-316 3-289 (379)
40 2ynn_A Coatomer subunit beta'; 100.0 4.4E-38 1.5E-42 290.5 33.0 251 3-314 47-302 (304)
41 4h5i_A Guanine nucleotide-exch 100.0 1.7E-37 5.9E-42 293.7 37.3 285 11-316 14-345 (365)
42 2xzm_R RACK1; ribosome, transl 100.0 5.4E-38 1.8E-42 295.1 33.2 261 4-315 69-341 (343)
43 1erj_A Transcriptional repress 100.0 1.6E-37 5.5E-42 297.4 35.5 248 12-315 124-390 (393)
44 3k26_A Polycomb protein EED; W 100.0 2.2E-38 7.4E-43 300.3 29.1 305 6-354 13-354 (366)
45 4g56_B MGC81050 protein; prote 100.0 2.1E-38 7.2E-43 299.2 28.7 304 16-354 10-331 (357)
46 3mkq_A Coatomer beta'-subunit; 100.0 8.4E-38 2.9E-42 327.9 36.0 278 1-349 3-284 (814)
47 3dwl_C Actin-related protein 2 100.0 5.7E-39 1.9E-43 306.0 24.5 261 2-313 2-280 (377)
48 1gxr_A ESG1, transducin-like e 100.0 1.7E-36 5.7E-41 283.9 40.7 274 7-312 47-335 (337)
49 3odt_A Protein DOA1; ubiquitin 100.0 5.7E-37 2E-41 284.0 36.2 278 2-316 9-298 (313)
50 3f3f_A Nucleoporin SEH1; struc 100.0 5.7E-37 2E-41 288.1 34.9 277 4-316 4-339 (351)
51 1pgu_A Actin interacting prote 100.0 1.7E-36 5.9E-41 307.7 40.3 315 2-354 54-602 (615)
52 2pbi_B Guanine nucleotide-bind 100.0 8.1E-37 2.8E-41 288.1 34.6 270 48-354 69-345 (354)
53 3i2n_A WD repeat-containing pr 100.0 9E-37 3.1E-41 288.2 34.7 303 4-316 11-355 (357)
54 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.9E-36 1E-40 293.8 39.3 302 3-354 110-426 (445)
55 4ery_A WD repeat-containing pr 100.0 1.8E-36 6.2E-41 280.9 35.8 250 3-313 57-311 (312)
56 3v7d_B Cell division control p 100.0 2.4E-36 8.2E-41 296.1 38.6 296 4-344 114-442 (464)
57 1yfq_A Cell cycle arrest prote 100.0 3E-37 1E-41 289.8 30.3 290 1-357 1-314 (342)
58 2pm9_A Protein WEB1, protein t 100.0 1.2E-37 4.2E-42 300.7 28.2 297 9-315 65-415 (416)
59 3sfz_A APAF-1, apoptotic pepti 100.0 8.9E-37 3E-41 334.2 38.1 330 4-354 608-1022(1249)
60 3sfz_A APAF-1, apoptotic pepti 100.0 4E-37 1.4E-41 336.9 34.6 333 3-354 649-1146(1249)
61 3gre_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 302.8 27.0 259 3-316 54-361 (437)
62 3dw8_B Serine/threonine-protei 100.0 1.9E-37 6.5E-42 302.3 28.3 301 9-354 26-435 (447)
63 2pm7_B Protein transport prote 100.0 6.1E-36 2.1E-40 275.2 33.6 249 86-354 5-273 (297)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-37 4.5E-42 306.0 23.8 297 10-316 132-519 (524)
65 3mmy_A MRNA export factor; mRN 100.0 3E-36 1E-40 285.7 31.8 285 2-355 30-335 (368)
66 2oaj_A Protein SNI1; WD40 repe 100.0 2E-36 6.8E-41 317.5 33.5 195 7-212 13-244 (902)
67 4a11_B DNA excision repair pro 100.0 4.4E-35 1.5E-39 281.7 39.0 283 3-316 35-367 (408)
68 3iz6_a 40S ribosomal protein R 100.0 2.5E-37 8.5E-42 294.7 22.3 277 49-354 72-363 (380)
69 1r5m_A SIR4-interacting protei 100.0 1E-35 3.4E-40 287.7 32.7 288 9-313 106-424 (425)
70 2oaj_A Protein SNI1; WD40 repe 100.0 7.3E-36 2.5E-40 313.3 34.1 338 4-354 92-649 (902)
71 3jro_A Fusion protein of prote 100.0 2.7E-36 9.2E-41 312.2 28.9 266 4-316 2-287 (753)
72 4gga_A P55CDC, cell division c 100.0 5.6E-35 1.9E-39 282.4 35.8 271 14-354 108-383 (420)
73 3bg1_A Protein SEC13 homolog; 100.0 2.7E-36 9.3E-41 280.0 24.6 248 86-354 9-281 (316)
74 2j04_A TAU60, YPL007P, hypothe 100.0 6E-36 2E-40 287.0 26.5 307 9-354 13-349 (588)
75 4aez_A CDC20, WD repeat-contai 100.0 5.3E-35 1.8E-39 280.9 33.3 276 9-316 89-382 (401)
76 3dm0_A Maltose-binding peripla 100.0 5.6E-35 1.9E-39 300.6 34.9 263 4-313 423-692 (694)
77 3k26_A Polycomb protein EED; W 100.0 1.3E-35 4.6E-40 281.1 27.5 253 10-314 68-366 (366)
78 3dwl_C Actin-related protein 2 100.0 1.1E-35 3.7E-40 283.2 27.0 275 2-312 46-377 (377)
79 4ggc_A P55CDC, cell division c 100.0 5.1E-34 1.7E-38 264.9 35.8 271 14-354 28-303 (318)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 9.5E-35 3.2E-39 279.3 30.0 280 13-353 36-331 (402)
81 3vl1_A 26S proteasome regulato 100.0 2.3E-34 7.9E-39 278.2 32.1 290 4-314 91-419 (420)
82 1p22_A F-BOX/WD-repeat protein 100.0 4.9E-34 1.7E-38 277.2 34.3 279 7-316 129-416 (435)
83 1pgu_A Actin interacting prote 100.0 6.1E-34 2.1E-38 288.9 36.5 299 8-346 15-349 (615)
84 4gga_A P55CDC, cell division c 100.0 8.8E-34 3E-38 274.0 35.7 250 6-316 142-397 (420)
85 1k8k_C P40, ARP2/3 complex 41 100.0 3E-34 1E-38 272.6 31.3 273 3-316 44-363 (372)
86 4aow_A Guanine nucleotide-bind 100.0 5.2E-34 1.8E-38 267.4 31.8 260 3-316 78-339 (340)
87 3mkq_A Coatomer beta'-subunit; 100.0 4.2E-34 1.4E-38 299.8 34.6 321 3-353 47-410 (814)
88 3zwl_B Eukaryotic translation 100.0 1E-33 3.4E-38 268.4 33.5 253 3-316 66-348 (369)
89 2xyi_A Probable histone-bindin 100.0 2.9E-34 9.9E-39 278.2 30.4 279 5-315 122-411 (430)
90 4e54_B DNA damage-binding prot 100.0 7.9E-35 2.7E-39 282.7 25.2 255 4-316 157-432 (435)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-33 3.9E-38 275.8 32.5 312 11-351 4-370 (450)
92 3ei3_B DNA damage-binding prot 100.0 1.1E-33 3.8E-38 270.0 31.5 250 8-314 115-382 (383)
93 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.6E-33 3E-37 269.3 38.2 274 3-315 151-443 (445)
94 2gx8_A NIF3-related protein; s 100.0 1.2E-36 4E-41 278.6 9.4 120 355-476 29-148 (397)
95 3jrp_A Fusion protein of prote 100.0 3.4E-33 1.2E-37 265.8 33.3 249 86-354 7-275 (379)
96 2nyd_A UPF0135 protein SA1388; 100.0 1.9E-36 6.3E-41 275.6 9.3 121 353-476 3-123 (370)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-33 5E-38 271.0 29.2 262 3-316 73-344 (402)
98 3v7d_B Cell division control p 100.0 1.3E-32 4.5E-37 269.5 35.7 277 3-311 154-460 (464)
99 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-34 1.3E-38 281.3 24.8 289 58-380 176-495 (524)
100 2fyw_A Conserved hypothetical 100.0 1.2E-35 4E-40 262.1 9.5 121 354-476 2-122 (267)
101 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-32 3.8E-37 259.9 30.1 293 3-316 11-338 (355)
102 4aez_A CDC20, WD repeat-contai 100.0 2.7E-32 9.2E-37 262.0 33.1 261 55-354 103-368 (401)
103 1sq9_A Antiviral protein SKI8; 100.0 5.1E-33 1.7E-37 266.6 26.9 265 56-351 27-370 (397)
104 4ggc_A P55CDC, cell division c 100.0 9.1E-32 3.1E-36 249.7 34.0 249 6-315 62-316 (318)
105 3gre_A Serine/threonine-protei 100.0 7.9E-33 2.7E-37 268.9 27.1 269 9-311 109-437 (437)
106 3lrv_A PRE-mRNA-splicing facto 100.0 3.1E-32 1.1E-36 255.9 28.4 270 19-314 44-333 (343)
107 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-31 3.7E-36 252.0 30.5 254 86-354 7-325 (351)
108 4h5i_A Guanine nucleotide-exch 100.0 4.3E-32 1.5E-36 256.7 27.0 206 9-257 131-344 (365)
109 3odt_A Protein DOA1; ubiquitin 100.0 6.5E-31 2.2E-35 243.2 33.6 253 53-351 27-282 (313)
110 3i2n_A WD repeat-containing pr 100.0 2.9E-31 9.9E-36 250.4 30.8 246 9-257 63-354 (357)
111 3dw8_B Serine/threonine-protei 100.0 1.1E-31 3.7E-36 261.6 28.0 303 3-313 73-445 (447)
112 4gq1_A NUP37; propeller, trans 100.0 1E-32 3.5E-37 263.9 20.1 252 88-354 87-378 (393)
113 3jro_A Fusion protein of prote 100.0 1.6E-31 5.5E-36 276.5 29.3 248 86-353 5-272 (753)
114 2xyi_A Probable histone-bindin 100.0 2.3E-31 7.8E-36 257.8 28.3 252 85-353 123-397 (430)
115 2yyb_A Hypothetical protein TT 100.0 6.1E-34 2.1E-38 246.7 9.1 117 355-477 1-120 (242)
116 1yfq_A Cell cycle arrest prote 100.0 1.5E-31 5.2E-36 250.9 25.9 247 4-312 49-322 (342)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.6E-30 5.6E-35 253.5 30.8 252 7-315 98-392 (450)
118 4a11_B DNA excision repair pro 100.0 3E-31 1E-35 254.9 24.3 259 86-354 39-353 (408)
119 4gq1_A NUP37; propeller, trans 100.0 1.9E-31 6.5E-36 255.1 20.8 244 14-312 92-387 (393)
120 1nmo_A Hypothetical protein YB 100.0 7.9E-33 2.7E-37 240.9 8.9 117 355-476 1-119 (247)
121 1p22_A F-BOX/WD-repeat protein 100.0 9.6E-30 3.3E-34 247.0 31.6 261 54-354 142-402 (435)
122 3mmy_A MRNA export factor; mRN 100.0 7.9E-30 2.7E-34 241.4 29.6 251 5-316 80-348 (368)
123 2w18_A PALB2, fancn, partner a 100.0 2.9E-29 1E-33 226.4 29.3 272 14-312 42-355 (356)
124 3bws_A Protein LP49; two-domai 100.0 3.5E-29 1.2E-33 242.8 30.1 271 12-353 123-418 (433)
125 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-29 1.2E-33 240.3 29.0 268 5-303 46-350 (588)
126 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-29 5.6E-34 237.3 25.0 232 53-316 46-294 (343)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.9E-28 1.7E-32 232.8 33.9 293 10-349 61-411 (415)
128 1l0q_A Surface layer protein; 100.0 1.2E-27 4.2E-32 228.7 35.9 269 4-350 25-304 (391)
129 2w18_A PALB2, fancn, partner a 100.0 2.7E-28 9.4E-33 220.0 22.2 217 11-254 111-355 (356)
130 1l0q_A Surface layer protein; 100.0 5.7E-27 2E-31 224.0 32.9 250 24-351 3-259 (391)
131 3bws_A Protein LP49; two-domai 100.0 6.4E-27 2.2E-31 226.9 32.2 243 6-314 164-432 (433)
132 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-26 4.6E-31 218.3 30.0 267 51-354 27-324 (355)
133 1nir_A Nitrite reductase; hemo 99.9 6.6E-25 2.3E-29 217.4 27.9 309 18-353 144-496 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.9 4.5E-25 1.5E-29 228.8 27.7 303 11-352 36-441 (741)
135 2ojh_A Uncharacterized protein 99.9 7.7E-25 2.6E-29 200.4 23.0 235 88-354 39-290 (297)
136 1ri6_A Putative isomerase YBHE 99.9 1.9E-23 6.4E-28 195.6 32.2 283 9-350 35-337 (343)
137 3vgz_A Uncharacterized protein 99.9 2.6E-23 8.8E-28 195.6 31.3 272 10-353 39-331 (353)
138 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-23 6.2E-28 200.9 29.4 226 3-296 170-410 (415)
139 1nir_A Nitrite reductase; hemo 99.9 3.7E-23 1.3E-27 204.9 30.6 295 3-316 171-516 (543)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-24 4.3E-29 224.9 19.9 271 12-351 17-375 (723)
141 1ri6_A Putative isomerase YBHE 99.9 9.9E-23 3.4E-27 190.7 30.9 245 88-354 35-295 (343)
142 2ojh_A Uncharacterized protein 99.9 3E-23 1E-27 189.7 26.5 241 5-305 35-293 (297)
143 3hfq_A Uncharacterized protein 99.9 2.5E-22 8.6E-27 188.6 32.5 256 9-313 37-316 (347)
144 1k32_A Tricorn protease; prote 99.9 3.8E-23 1.3E-27 221.7 27.6 303 4-353 92-489 (1045)
145 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-23 7E-28 215.1 23.9 294 14-352 28-417 (706)
146 3u4y_A Uncharacterized protein 99.9 1.9E-22 6.7E-27 187.9 28.2 276 17-353 3-290 (331)
147 1k32_A Tricorn protease; prote 99.9 4.4E-22 1.5E-26 213.5 30.4 311 5-352 239-624 (1045)
148 1xfd_A DIP, dipeptidyl aminope 99.9 1.5E-22 5E-27 209.3 25.6 282 5-351 51-425 (723)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 5.9E-22 2E-26 191.0 26.0 218 10-258 35-280 (434)
150 3u4y_A Uncharacterized protein 99.9 3.5E-21 1.2E-25 179.4 29.8 256 5-316 34-306 (331)
151 3hfq_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 180.9 28.9 246 88-354 37-304 (347)
152 3scy_A Hypothetical bacterial 99.9 2.7E-20 9.2E-25 175.7 35.1 277 10-344 48-360 (361)
153 3o4h_A Acylamino-acid-releasin 99.9 2.7E-22 9.4E-27 201.9 20.6 256 10-352 20-298 (582)
154 2z3z_A Dipeptidyl aminopeptida 99.9 6.2E-21 2.1E-25 196.6 31.2 275 12-316 82-437 (706)
155 1pby_B Quinohemoprotein amine 99.9 6.3E-21 2.2E-25 177.9 26.4 259 24-316 2-312 (337)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.4E-26 188.1 22.7 205 90-316 36-280 (434)
157 1jmx_B Amine dehydrogenase; ox 99.9 6.2E-21 2.1E-25 178.9 24.3 236 16-316 4-327 (349)
158 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-20 6.1E-25 194.3 27.1 271 13-314 110-459 (741)
159 3scy_A Hypothetical bacterial 99.9 4E-19 1.4E-23 167.6 32.0 244 89-354 48-324 (361)
160 3pe7_A Oligogalacturonate lyas 99.9 1.5E-20 5.3E-25 179.1 21.6 279 4-354 23-369 (388)
161 3vgz_A Uncharacterized protein 99.9 3.4E-19 1.2E-23 167.4 30.2 239 12-306 89-336 (353)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 3E-19 1E-23 168.7 28.3 253 12-315 40-342 (365)
163 1z68_A Fibroblast activation p 99.9 4.9E-20 1.7E-24 190.3 22.9 303 15-351 19-425 (719)
164 1pby_B Quinohemoprotein amine 99.8 5.1E-19 1.7E-23 164.9 21.8 252 57-353 3-297 (337)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.6E-18 1.9E-22 160.0 28.1 247 90-354 39-328 (365)
166 4a5s_A Dipeptidyl peptidase 4 99.8 3.7E-18 1.3E-22 176.4 29.0 307 11-350 16-430 (740)
167 1z68_A Fibroblast activation p 99.8 2.2E-18 7.5E-23 177.9 23.7 278 13-316 61-445 (719)
168 3o4h_A Acylamino-acid-releasin 99.8 9.5E-19 3.2E-23 176.1 17.6 220 89-351 20-261 (582)
169 2oiz_A Aromatic amine dehydrog 99.8 2.9E-17 9.9E-22 154.5 25.8 277 5-348 45-360 (361)
170 1q7f_A NHL, brain tumor CG1071 99.8 3.3E-16 1.1E-20 142.5 31.7 247 8-315 26-281 (286)
171 3c5m_A Oligogalacturonate lyas 99.8 1.3E-18 4.6E-23 166.0 16.4 263 14-354 38-369 (396)
172 3fvz_A Peptidyl-glycine alpha- 99.8 9.6E-17 3.3E-21 149.1 28.0 269 11-315 23-323 (329)
173 1jmx_B Amine dehydrogenase; ox 99.8 2.1E-17 7E-22 154.8 22.6 235 95-353 4-312 (349)
174 3azo_A Aminopeptidase; POP fam 99.8 4.9E-17 1.7E-21 166.2 23.7 288 4-316 16-371 (662)
175 2dg1_A DRP35, lactonase; beta 99.7 3.7E-16 1.3E-20 145.5 25.1 275 12-354 6-298 (333)
176 3pe7_A Oligogalacturonate lyas 99.7 2.1E-16 7E-21 150.5 21.1 246 6-314 75-382 (388)
177 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-15 3.6E-20 157.4 27.5 249 9-316 122-416 (710)
178 3e5z_A Putative gluconolactona 99.7 2.1E-15 7.2E-20 137.9 25.9 248 5-316 21-288 (296)
179 2dg1_A DRP35, lactonase; beta 99.7 1.4E-14 4.6E-19 134.8 31.3 243 5-305 38-301 (333)
180 2gop_A Trilobed protease; beta 99.7 6.2E-15 2.1E-19 138.0 27.7 205 91-345 59-311 (347)
181 2bkl_A Prolyl endopeptidase; m 99.7 8.5E-16 2.9E-20 157.6 23.4 248 9-316 118-399 (695)
182 4a5s_A Dipeptidyl peptidase 4 99.7 1.4E-15 4.7E-20 157.2 21.6 237 53-316 26-355 (740)
183 2gop_A Trilobed protease; beta 99.7 2E-14 7E-19 134.4 27.6 223 12-313 59-330 (347)
184 1rwi_B Serine/threonine-protei 99.7 1.7E-14 5.7E-19 129.9 24.9 240 13-316 25-266 (270)
185 2z2n_A Virginiamycin B lyase; 99.7 1.5E-12 5.1E-17 118.7 36.4 271 7-350 10-280 (299)
186 2xdw_A Prolyl endopeptidase; a 99.7 4.5E-14 1.5E-18 145.2 29.1 234 88-351 122-395 (710)
187 3fvz_A Peptidyl-glycine alpha- 99.7 4.2E-14 1.4E-18 131.3 26.1 229 89-350 22-306 (329)
188 1q7f_A NHL, brain tumor CG1071 99.7 9E-14 3.1E-18 126.3 27.2 228 87-352 26-267 (286)
189 3e5z_A Putative gluconolactona 99.7 5.6E-14 1.9E-18 128.3 25.5 230 88-354 25-275 (296)
190 2oiz_A Aromatic amine dehydrog 99.7 2.5E-14 8.6E-19 134.4 23.7 227 95-354 54-323 (361)
191 3azo_A Aminopeptidase; POP fam 99.6 8.3E-15 2.8E-19 149.7 21.8 233 87-352 20-310 (662)
192 3rxy_A NIF3 protein; structura 99.6 3.7E-16 1.3E-20 131.0 9.3 70 353-428 5-74 (278)
193 3c5m_A Oligogalacturonate lyas 99.6 4E-15 1.4E-19 141.8 17.2 254 15-316 84-386 (396)
194 1yr2_A Prolyl oligopeptidase; 99.6 4.2E-14 1.4E-18 146.1 24.9 250 9-316 160-443 (741)
195 1qks_A Cytochrome CD1 nitrite 99.6 1.4E-12 4.7E-17 128.9 33.8 291 13-353 198-520 (567)
196 2bkl_A Prolyl endopeptidase; m 99.6 2.2E-14 7.6E-19 147.1 20.9 234 88-351 118-378 (695)
197 3no2_A Uncharacterized protein 99.6 7.3E-13 2.5E-17 119.1 25.9 217 22-302 4-231 (276)
198 2qc5_A Streptogramin B lactona 99.6 1.7E-11 5.9E-16 111.7 35.6 269 9-349 17-285 (300)
199 1qks_A Cytochrome CD1 nitrite 99.6 3.7E-12 1.3E-16 125.9 32.5 268 21-352 165-456 (567)
200 3dsm_A Uncharacterized protein 99.6 3E-12 1E-16 118.6 28.2 236 13-316 45-303 (328)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.2E-12 1.4E-16 116.8 27.8 252 8-315 14-300 (314)
202 1yr2_A Prolyl oligopeptidase; 99.5 8.9E-13 3.1E-17 136.2 25.4 232 89-351 161-422 (741)
203 1rwi_B Serine/threonine-protei 99.5 1.4E-12 4.7E-17 117.2 23.1 223 92-350 25-248 (270)
204 3g4e_A Regucalcin; six bladed 99.5 3.2E-11 1.1E-15 110.0 31.7 237 7-303 8-261 (297)
205 2z2n_A Virginiamycin B lyase; 99.5 5.5E-11 1.9E-15 108.3 32.8 199 89-316 97-297 (299)
206 3dsm_A Uncharacterized protein 99.5 5.4E-12 1.9E-16 116.8 25.8 223 91-353 44-284 (328)
207 3no2_A Uncharacterized protein 99.5 3.5E-12 1.2E-16 114.7 22.8 216 101-352 4-229 (276)
208 3iuj_A Prolyl endopeptidase; h 99.5 3.1E-12 1.1E-16 130.9 23.5 246 9-316 126-407 (693)
209 2mad_H Methylamine dehydrogena 99.5 1.5E-10 5.3E-15 108.6 31.9 244 16-316 70-352 (373)
210 3g4e_A Regucalcin; six bladed 99.5 7.8E-11 2.7E-15 107.4 28.9 235 89-354 11-260 (297)
211 3sjl_D Methylamine dehydrogena 99.5 6.1E-11 2.1E-15 110.0 28.1 292 17-346 38-384 (386)
212 1xip_A Nucleoporin NUP159; bet 99.5 2.2E-12 7.4E-17 120.2 18.4 184 13-243 39-231 (388)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.3E-11 4.4E-16 113.5 23.5 233 90-351 17-283 (314)
214 1xip_A Nucleoporin NUP159; bet 99.5 2.2E-12 7.4E-17 120.3 17.5 175 92-301 39-231 (388)
215 3hrp_A Uncharacterized protein 99.4 5.5E-11 1.9E-15 113.3 27.2 242 12-312 131-408 (409)
216 3dr2_A Exported gluconolactona 99.4 5.6E-11 1.9E-15 108.8 25.4 236 5-306 38-299 (305)
217 2ghs_A AGR_C_1268P; regucalcin 99.4 5.4E-10 1.8E-14 103.2 31.5 191 90-303 89-291 (326)
218 2qc5_A Streptogramin B lactona 99.4 6.9E-10 2.4E-14 101.0 30.3 196 90-312 103-298 (300)
219 2mad_H Methylamine dehydrogena 99.4 1E-09 3.4E-14 103.1 31.7 224 95-353 70-336 (373)
220 3hrp_A Uncharacterized protein 99.4 1.5E-10 5.2E-15 110.3 25.0 203 91-316 131-356 (409)
221 3c75_H MADH, methylamine dehyd 99.4 9.3E-11 3.2E-15 110.8 23.1 240 21-316 82-404 (426)
222 2qe8_A Uncharacterized protein 99.4 1.3E-10 4.5E-15 108.2 23.5 255 12-312 17-319 (343)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 7.7E-10 2.6E-14 102.2 28.1 227 92-353 50-289 (326)
224 3iuj_A Prolyl endopeptidase; h 99.3 1.1E-10 3.8E-15 119.4 20.7 230 88-351 126-386 (693)
225 3dr2_A Exported gluconolactona 99.3 8E-10 2.7E-14 101.1 22.2 225 89-352 43-293 (305)
226 3sjl_D Methylamine dehydrogena 99.2 4.5E-09 1.5E-13 97.5 23.7 262 53-352 42-348 (386)
227 1mda_H Methylamine dehydrogena 99.2 7.1E-10 2.4E-14 103.0 16.9 238 16-316 69-348 (368)
228 2ece_A 462AA long hypothetical 99.2 1.2E-08 3.9E-13 95.4 24.5 191 92-302 139-399 (462)
229 1yiq_A Quinohemoprotein alcoho 99.2 8.7E-09 3E-13 104.8 25.0 296 23-350 70-532 (689)
230 1kb0_A Quinohemoprotein alcoho 99.1 4.5E-09 1.5E-13 106.7 22.3 296 23-350 77-534 (677)
231 2qe8_A Uncharacterized protein 99.1 1.5E-08 5.1E-13 94.3 23.7 240 91-352 17-307 (343)
232 2hz6_A Endoplasmic reticulum t 99.1 6E-11 2E-15 111.5 5.3 182 101-316 8-194 (369)
233 1kb0_A Quinohemoprotein alcoho 99.1 1.8E-08 6.1E-13 102.3 23.1 258 22-299 127-535 (677)
234 1npe_A Nidogen, entactin; glyc 99.1 8.3E-07 2.9E-11 79.1 31.2 222 91-348 36-263 (267)
235 2ece_A 462AA long hypothetical 99.0 3.6E-08 1.2E-12 92.2 21.8 228 100-354 93-399 (462)
236 2hz6_A Endoplasmic reticulum t 99.0 1.8E-10 6.2E-15 108.3 4.7 181 22-257 8-193 (369)
237 3c75_H MADH, methylamine dehyd 99.0 8.9E-08 3.1E-12 90.5 22.1 111 141-257 271-403 (426)
238 1mda_H Methylamine dehydrogena 99.0 1.4E-08 4.9E-13 94.3 15.3 217 95-352 69-330 (368)
239 1yiq_A Quinohemoprotein alcoho 98.9 1.6E-07 5.5E-12 95.5 23.9 261 23-303 121-538 (689)
240 1fwx_A Nitrous oxide reductase 98.9 6E-07 2E-11 87.0 24.0 237 64-316 111-433 (595)
241 2fp8_A Strictosidine synthase; 98.9 9.6E-07 3.3E-11 81.1 24.2 258 12-316 19-315 (322)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.8 3.5E-06 1.2E-10 79.2 27.9 258 22-311 102-375 (376)
243 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.4E-06 8.1E-11 80.4 26.6 258 22-316 52-339 (376)
244 3hxj_A Pyrrolo-quinoline quino 98.8 2.8E-07 9.5E-12 84.9 18.7 179 102-316 107-285 (330)
245 2iwa_A Glutamine cyclotransfer 98.8 2.8E-06 9.4E-11 74.6 23.0 198 13-257 22-238 (266)
246 2iwa_A Glutamine cyclotransfer 98.8 4.8E-06 1.6E-10 73.1 23.7 197 91-315 21-238 (266)
247 1fwx_A Nitrous oxide reductase 98.8 1.7E-07 6E-12 90.7 15.7 237 101-354 100-406 (595)
248 1npe_A Nidogen, entactin; glyc 98.7 1.5E-05 5E-10 71.0 27.1 221 12-296 36-263 (267)
249 3hxj_A Pyrrolo-quinoline quino 98.7 1.3E-06 4.5E-11 80.3 19.6 263 8-316 56-326 (330)
250 1kv9_A Type II quinohemoprotei 98.7 3.2E-06 1.1E-10 85.7 23.8 184 23-213 66-336 (668)
251 3nol_A Glutamine cyclotransfer 98.7 3.9E-06 1.3E-10 72.8 20.3 195 5-245 35-244 (262)
252 2p4o_A Hypothetical protein; p 98.6 4.8E-05 1.6E-09 69.1 28.0 233 12-305 32-279 (306)
253 2xe4_A Oligopeptidase B; hydro 98.6 6.4E-06 2.2E-10 84.8 24.4 198 13-254 175-396 (751)
254 3nol_A Glutamine cyclotransfer 98.6 1.4E-05 4.8E-10 69.2 22.2 187 91-303 43-244 (262)
255 4a2l_A BT_4663, two-component 98.6 0.0003 1E-08 73.1 36.7 299 14-350 175-512 (795)
256 1k3i_A Galactose oxidase precu 98.6 3.2E-06 1.1E-10 85.8 20.2 241 90-354 242-529 (656)
257 4a2l_A BT_4663, two-component 98.6 0.00035 1.2E-08 72.6 36.0 308 11-350 262-600 (795)
258 3qqz_A Putative uncharacterize 98.6 0.0002 6.7E-09 62.4 28.5 209 86-311 22-250 (255)
259 3qqz_A Putative uncharacterize 98.6 9E-05 3.1E-09 64.6 26.3 208 5-253 20-250 (255)
260 2ad6_A Methanol dehydrogenase 98.6 4.3E-05 1.5E-09 75.7 27.4 185 23-215 62-340 (571)
261 2fp8_A Strictosidine synthase; 98.5 3.3E-05 1.1E-09 70.8 24.1 202 91-313 19-268 (322)
262 1kv9_A Type II quinohemoprotei 98.5 2E-05 6.8E-10 79.9 24.3 230 23-257 117-489 (668)
263 2p4o_A Hypothetical protein; p 98.5 0.00014 4.9E-09 66.0 27.9 233 91-354 32-276 (306)
264 3nok_A Glutaminyl cyclase; bet 98.5 4.3E-05 1.5E-09 66.2 22.5 186 14-245 57-254 (268)
265 3mbr_X Glutamine cyclotransfer 98.5 4.6E-05 1.6E-09 65.4 21.1 195 5-245 13-223 (243)
266 3nok_A Glutaminyl cyclase; bet 98.4 6.5E-05 2.2E-09 65.1 21.5 182 91-303 55-254 (268)
267 3mbr_X Glutamine cyclotransfer 98.4 0.00041 1.4E-08 59.5 25.9 184 90-303 20-223 (243)
268 2ad6_A Methanol dehydrogenase 98.4 4.2E-05 1.4E-09 75.8 22.5 229 23-257 115-495 (571)
269 1w6s_A Methanol dehydrogenase 98.4 0.00021 7.1E-09 70.9 26.2 186 23-215 62-347 (599)
270 3v9f_A Two-component system se 98.4 0.0025 8.7E-08 65.9 35.7 307 12-349 211-552 (781)
271 3tc9_A Hypothetical hydrolase; 98.4 0.00014 4.7E-09 69.4 24.2 117 90-210 178-301 (430)
272 1flg_A Protein (quinoprotein e 98.4 0.00027 9.3E-09 70.1 26.8 229 23-257 117-517 (582)
273 3v64_C Agrin; beta propeller, 98.4 0.0014 4.8E-08 60.6 30.0 201 90-316 72-277 (349)
274 1flg_A Protein (quinoprotein e 98.3 0.00084 2.9E-08 66.6 29.9 186 24-214 69-359 (582)
275 4hw6_A Hypothetical protein, I 98.3 0.00028 9.7E-09 67.3 25.2 243 12-313 139-432 (433)
276 3v9f_A Two-component system se 98.3 0.0026 8.9E-08 65.8 34.4 305 11-350 257-597 (781)
277 2xe4_A Oligopeptidase B; hydro 98.3 8.7E-05 3E-09 76.4 22.6 199 92-311 175-395 (751)
278 1w6s_A Methanol dehydrogenase 98.3 0.0004 1.4E-08 68.9 26.3 236 17-258 111-505 (599)
279 1ijq_A LDL receptor, low-densi 98.2 0.003 1E-07 57.4 31.5 204 90-316 29-240 (316)
280 1k3i_A Galactose oxidase precu 98.2 5.9E-05 2E-09 76.5 18.9 233 15-303 246-530 (656)
281 2xbg_A YCF48-like protein; pho 98.2 0.0034 1.2E-07 57.3 29.5 272 11-312 35-320 (327)
282 3p5b_L Low density lipoprotein 98.2 0.0047 1.6E-07 58.2 31.3 232 57-316 84-322 (400)
283 3v65_B Low-density lipoprotein 98.2 0.0025 8.4E-08 59.8 27.8 227 58-316 89-320 (386)
284 3amr_A 3-phytase; beta-propell 98.1 0.0038 1.3E-07 56.5 25.1 197 101-313 39-262 (355)
285 2xzh_A Clathrin heavy chain 1; 98.0 0.0059 2E-07 54.3 27.9 230 17-254 72-330 (365)
286 3sov_A LRP-6, low-density lipo 98.0 0.0073 2.5E-07 54.8 26.9 201 91-316 35-240 (318)
287 2xbg_A YCF48-like protein; pho 98.0 0.0018 6.1E-08 59.2 22.7 158 88-253 160-319 (327)
288 1ijq_A LDL receptor, low-densi 98.0 0.01 3.4E-07 53.9 28.3 158 92-257 78-239 (316)
289 3kya_A Putative phosphatase; s 97.9 0.01 3.5E-07 56.9 26.8 208 90-316 185-477 (496)
290 2p9w_A MAL S 1 allergenic prot 97.9 0.0018 6.2E-08 58.1 20.1 214 8-254 9-263 (334)
291 3v64_C Agrin; beta propeller, 97.9 0.011 3.7E-07 54.5 26.2 156 91-256 116-275 (349)
292 4hw6_A Hypothetical protein, I 97.9 0.0031 1.1E-07 60.1 22.8 205 91-312 139-372 (433)
293 3a9g_A Putative uncharacterize 97.9 0.015 5.1E-07 53.6 27.0 241 12-302 29-330 (354)
294 1bpo_A Protein (clathrin); cla 97.8 0.022 7.4E-07 52.8 30.5 230 17-254 71-329 (494)
295 2p9w_A MAL S 1 allergenic prot 97.8 0.0019 6.4E-08 58.0 18.2 163 90-256 12-215 (334)
296 3tc9_A Hypothetical hydrolase; 97.8 0.0014 4.7E-08 62.5 18.5 157 91-256 137-301 (430)
297 3v65_B Low-density lipoprotein 97.8 0.012 4E-07 55.2 24.6 155 92-256 160-318 (386)
298 3ei3_A DNA damage-binding prot 97.8 0.066 2.3E-06 57.4 33.8 277 11-316 553-915 (1158)
299 3m0c_C LDL receptor, low-densi 97.8 0.042 1.4E-06 56.3 30.0 231 58-316 397-634 (791)
300 3p5b_L Low density lipoprotein 97.7 0.03 1E-06 52.6 30.0 160 90-257 158-321 (400)
301 3a9g_A Putative uncharacterize 97.7 0.019 6.4E-07 53.0 24.8 248 90-350 28-326 (354)
302 3sov_A LRP-6, low-density lipo 97.7 0.023 7.9E-07 51.5 24.9 157 92-258 80-240 (318)
303 2ism_A Putative oxidoreductase 97.7 0.033 1.1E-06 51.3 27.6 244 11-302 30-333 (352)
304 3amr_A 3-phytase; beta-propell 97.7 0.018 6.1E-07 52.2 22.3 144 111-255 98-262 (355)
305 2ism_A Putative oxidoreductase 97.6 0.026 9.1E-07 51.9 24.3 248 91-350 31-329 (352)
306 1n7d_A LDL receptor, low-densi 97.5 0.00043 1.5E-08 70.3 11.6 202 91-316 406-616 (699)
307 3sre_A PON1, serum paraoxonase 97.5 0.058 2E-06 49.4 24.4 199 91-311 50-295 (355)
308 3s94_A LRP-6, low-density lipo 97.5 0.11 3.8E-06 51.7 28.0 203 89-316 38-245 (619)
309 3kya_A Putative phosphatase; s 97.4 0.052 1.8E-06 52.0 23.7 162 92-255 140-340 (496)
310 3ii7_A Kelch-like protein 7; p 97.4 0.039 1.3E-06 49.5 22.0 191 101-316 55-274 (306)
311 3m0c_C LDL receptor, low-densi 97.4 0.11 3.8E-06 53.2 27.0 159 90-257 470-633 (791)
312 2xn4_A Kelch-like protein 2; s 97.4 0.066 2.3E-06 47.9 22.8 191 101-316 61-278 (302)
313 1n7d_A LDL receptor, low-densi 97.4 0.0018 6E-08 65.8 13.2 154 93-254 455-612 (699)
314 3pbp_A Nucleoporin NUP82; beta 97.3 0.042 1.4E-06 50.9 20.4 153 98-252 28-208 (452)
315 2vpj_A Kelch-like protein 12; 97.3 0.078 2.7E-06 47.4 22.5 191 101-316 62-280 (301)
316 4a0p_A LRP6, LRP-6, low-densit 97.3 0.19 6.4E-06 50.2 30.2 199 90-316 36-239 (628)
317 3pbp_A Nucleoporin NUP82; beta 97.2 0.041 1.4E-06 51.0 18.8 159 144-310 30-208 (452)
318 4asc_A Kelch repeat and BTB do 97.2 0.12 4.2E-06 46.5 22.7 147 100-255 44-220 (315)
319 2xzh_A Clathrin heavy chain 1; 97.1 0.13 4.5E-06 45.8 28.5 212 32-257 48-291 (365)
320 2uvk_A YJHT; unknown function, 97.1 0.067 2.3E-06 49.2 20.4 196 101-316 65-344 (357)
321 1zgk_A Kelch-like ECH-associat 97.1 0.15 5E-06 45.8 23.2 191 101-316 70-289 (308)
322 2g8s_A Glucose/sorbosone dehyd 97.0 0.2 7E-06 46.0 27.1 30 11-40 17-46 (353)
323 2g8s_A Glucose/sorbosone dehyd 96.9 0.24 8.1E-06 45.5 23.3 248 91-350 18-337 (353)
324 3sre_A PON1, serum paraoxonase 96.9 0.25 8.6E-06 45.1 27.9 191 13-209 51-297 (355)
325 1xi4_A Clathrin heavy chain; a 96.9 0.048 1.6E-06 58.3 18.0 228 19-254 73-329 (1630)
326 3das_A Putative oxidoreductase 96.8 0.28 9.7E-06 44.6 26.8 250 90-350 31-322 (347)
327 1bpo_A Protein (clathrin); cla 96.8 0.33 1.1E-05 45.2 28.4 255 31-315 46-332 (494)
328 2xn4_A Kelch-like protein 2; s 96.7 0.28 9.7E-06 43.7 22.3 146 101-255 108-275 (302)
329 3das_A Putative oxidoreductase 96.7 0.32 1.1E-05 44.3 26.2 248 10-302 30-326 (347)
330 1zgk_A Kelch-like ECH-associat 96.7 0.32 1.1E-05 43.6 22.9 145 101-254 121-285 (308)
331 3ii7_A Kelch-like protein 7; p 96.7 0.34 1.2E-05 43.3 22.6 146 101-255 101-271 (306)
332 2vpj_A Kelch-like protein 12; 96.6 0.36 1.2E-05 42.9 25.2 146 101-255 112-277 (301)
333 1cru_A Protein (soluble quinop 96.4 0.19 6.5E-06 47.9 18.0 109 91-199 27-163 (454)
334 3s94_A LRP-6, low-density lipo 96.4 0.91 3.1E-05 45.2 32.6 306 12-350 84-449 (619)
335 2woz_A Kelch repeat and BTB do 96.3 0.6 2.1E-05 41.9 23.2 149 99-256 54-231 (318)
336 4asc_A Kelch repeat and BTB do 96.2 0.65 2.2E-05 41.6 21.0 187 104-316 7-223 (315)
337 1tl2_A L10, protein (tachylect 96.1 0.17 5.9E-06 42.3 13.5 191 102-313 4-207 (236)
338 3ott_A Two-component system se 96.1 1.5 5.1E-05 44.9 31.3 195 90-316 62-262 (758)
339 1cru_A Protein (soluble quinop 95.9 1.3 4.3E-05 42.2 29.2 114 11-153 26-162 (454)
340 2zwa_A Leucine carboxyl methyl 95.8 0.51 1.7E-05 47.8 18.4 204 100-316 396-637 (695)
341 1tl2_A L10, protein (tachylect 95.7 0.22 7.7E-06 41.6 12.7 156 91-257 41-209 (236)
342 2uvk_A YJHT; unknown function, 95.7 1.2 4.2E-05 40.6 21.5 130 112-246 168-326 (357)
343 1xi4_A Clathrin heavy chain; a 95.7 0.91 3.1E-05 49.0 19.7 214 32-259 47-292 (1630)
344 2zwa_A Leucine carboxyl methyl 95.7 0.78 2.7E-05 46.4 19.2 153 101-256 451-635 (695)
345 3ei3_A DNA damage-binding prot 95.5 3.5 0.00012 44.3 35.7 213 63-302 530-755 (1158)
346 2woz_A Kelch repeat and BTB do 95.3 1.5 5.1E-05 39.2 19.7 180 113-316 25-233 (318)
347 3sbq_A Nitrous-oxide reductase 95.2 2.4 8.1E-05 40.9 26.1 115 181-303 324-454 (638)
348 4a0p_A LRP6, LRP-6, low-densit 94.2 5 0.00017 39.9 32.7 200 91-316 340-551 (628)
349 3s25_A Hypothetical 7-bladed b 94.1 3 0.0001 37.1 18.7 178 97-316 59-257 (302)
350 2be1_A Serine/threonine-protei 93.7 1.2 4E-05 40.3 13.1 187 24-215 11-236 (339)
351 2be1_A Serine/threonine-protei 93.3 0.54 1.9E-05 42.5 10.2 111 103-216 11-136 (339)
352 3s25_A Hypothetical 7-bladed b 92.4 5.6 0.00019 35.3 19.2 173 100-316 23-218 (302)
353 2wg3_C Hedgehog-interacting pr 89.7 7.8 0.00027 36.8 14.4 111 136-246 15-159 (463)
354 2wg3_C Hedgehog-interacting pr 86.3 23 0.00078 33.6 29.4 29 12-40 14-43 (463)
355 1sqj_A OXG-RCBH, oligoxylogluc 83.5 36 0.0012 34.8 16.4 155 90-246 14-190 (789)
356 3b7f_A Glycosyl hydrolase, BNR 83.5 27 0.00092 32.0 19.7 155 90-247 54-254 (394)
357 3sbq_A Nitrous-oxide reductase 82.5 11 0.00037 36.5 10.8 107 136-244 324-453 (638)
358 3no0_A DNA gyrase subunit A; D 77.3 36 0.0012 29.6 19.8 209 90-313 23-245 (276)
359 3rxy_A NIF3 protein; structura 77.0 2.5 8.5E-05 36.1 4.2 85 355-457 162-252 (278)
360 1wp5_A Topoisomerase IV; broke 76.7 41 0.0014 30.0 25.0 233 21-255 3-276 (323)
361 1zi0_A DNA gyrase subunit A; b 76.7 40 0.0014 29.8 24.8 234 21-256 1-277 (307)
362 3qhy_B Beta-lactamase inhibito 76.4 38 0.0013 29.4 20.9 184 91-315 63-247 (282)
363 2cn3_A Xyloglucanase, beta-1,4 74.6 76 0.0026 32.1 21.8 165 91-256 23-229 (737)
364 3ott_A Two-component system se 74.6 76 0.0026 32.1 33.7 224 11-252 62-303 (758)
365 2fyw_A Conserved hypothetical 71.6 16 0.00055 31.6 8.3 58 354-419 144-204 (267)
366 4gq2_M Nucleoporin NUP120; bet 71.3 63 0.0021 33.9 14.1 37 90-126 235-271 (950)
367 4hvt_A Ritya.17583.B, post-pro 71.0 91 0.0031 31.4 20.4 208 92-315 130-382 (711)
368 1suu_A DNA gyrase subunit A; t 69.0 62 0.0021 28.6 23.7 204 100-314 6-231 (312)
369 4gq2_M Nucleoporin NUP120; bet 68.3 22 0.00075 37.3 9.9 38 12-49 236-273 (950)
370 3q6k_A 43.2 kDa salivary prote 67.6 75 0.0025 29.1 21.9 178 112-302 123-342 (381)
371 3uc1_A DNA gyrase subunit A; D 67.4 69 0.0023 28.6 27.9 166 89-256 93-279 (327)
372 1suu_A DNA gyrase subunit A; t 63.9 78 0.0027 28.0 27.3 164 90-256 46-231 (312)
373 3b7f_A Glycosyl hydrolase, BNR 63.4 89 0.003 28.4 22.1 145 102-251 22-203 (394)
374 1sqj_A OXG-RCBH, oligoxylogluc 63.1 1.4E+02 0.0047 30.5 16.6 157 134-304 14-190 (789)
375 1zi0_A DNA gyrase subunit A; b 56.0 1.1E+02 0.0036 27.0 25.0 203 100-313 1-225 (307)
376 1nmo_A Hypothetical protein YB 52.2 24 0.00081 30.1 5.7 81 354-457 136-217 (247)
377 4fhn_B Nucleoporin NUP120; pro 51.9 42 0.0014 36.1 8.8 37 91-127 238-274 (1139)
378 2vef_A Dihydropteroate synthas 51.3 18 0.00063 32.1 4.9 52 394-456 85-137 (314)
379 3f7f_A Nucleoporin NUP120; nuc 48.8 18 0.00061 36.2 4.8 38 12-51 222-259 (729)
380 4fhn_B Nucleoporin NUP120; pro 48.6 9.1 0.00031 41.2 3.0 37 13-49 239-275 (1139)
381 2bmb_A Folic acid synthesis pr 47.8 24 0.00084 33.9 5.4 52 394-456 311-364 (545)
382 2vp8_A Dihydropteroate synthas 47.3 24 0.00081 31.3 5.0 51 394-456 117-168 (318)
383 2y5s_A DHPS, dihydropteroate s 47.3 22 0.00075 31.2 4.7 51 394-456 97-148 (294)
384 4hb7_A Dihydropteroate synthas 47.1 23 0.00078 30.5 4.7 51 395-456 82-133 (270)
385 3l6v_A GYRA, DNA gyrase subuni 45.6 1.8E+02 0.006 26.5 24.9 156 98-256 3-180 (370)
386 3zwu_A Alkaline phosphatase PH 45.5 82 0.0028 30.8 8.9 60 92-152 477-548 (592)
387 2pd2_A Hypothetical protein ST 44.7 41 0.0014 24.0 5.2 46 413-461 29-74 (108)
388 3no0_A DNA gyrase subunit A; D 44.3 1.5E+02 0.0053 25.4 21.9 204 4-209 13-245 (276)
389 3q6k_A 43.2 kDa salivary prote 43.5 1.9E+02 0.0066 26.3 23.7 152 90-243 151-341 (381)
390 3zwu_A Alkaline phosphatase PH 43.3 87 0.003 30.6 8.7 62 227-301 477-548 (592)
391 3l6v_A GYRA, DNA gyrase subuni 42.0 2E+02 0.0068 26.1 28.0 233 20-254 4-314 (370)
392 3qhy_B Beta-lactamase inhibito 41.7 1.7E+02 0.0058 25.2 19.0 214 12-256 24-246 (282)
393 3tr9_A Dihydropteroate synthas 40.4 30 0.001 30.6 4.5 52 394-457 105-157 (314)
394 1vp8_A Hypothetical protein AF 40.0 69 0.0023 25.8 6.0 67 392-462 44-112 (201)
395 4a9v_A PHOX; hydrolase, beta-p 38.2 1.8E+02 0.0061 28.3 9.7 61 91-153 476-549 (592)
396 1aj0_A DHPS, dihydropteroate s 38.2 37 0.0013 29.6 4.7 51 394-456 90-141 (282)
397 3cu2_A Ribulose-5-phosphate 3- 37.9 67 0.0023 27.1 6.1 58 394-462 73-143 (237)
398 3uc1_A DNA gyrase subunit A; D 37.5 2.2E+02 0.0075 25.2 23.8 155 54-209 108-278 (327)
399 1eye_A DHPS 1, dihydropteroate 37.2 37 0.0013 29.5 4.5 52 394-456 80-132 (280)
400 4a9v_A PHOX; hydrolase, beta-p 35.0 2E+02 0.0069 27.9 9.5 62 226-302 476-549 (592)
401 1zvt_A Topoisomerase IV subuni 34.6 2.1E+02 0.0072 24.2 15.0 152 148-313 4-162 (256)
402 2dqw_A Dihydropteroate synthas 34.5 48 0.0016 29.0 4.8 51 394-456 103-154 (294)
403 1tx2_A DHPS, dihydropteroate s 34.5 42 0.0014 29.4 4.5 50 396-456 117-167 (297)
404 3f7f_A Nucleoporin NUP120; nuc 34.3 71 0.0024 32.0 6.5 38 91-130 222-259 (729)
405 3a0f_A Xyloglucanase; beta-pro 34.2 3.8E+02 0.013 27.1 20.5 208 90-311 20-281 (763)
406 3kci_A Probable E3 ubiquitin-p 34.1 2.7E+02 0.0091 25.2 27.8 212 92-313 54-292 (389)
407 2cn3_A Xyloglucanase, beta-1,4 33.2 3.9E+02 0.013 26.8 21.7 150 91-243 72-261 (737)
408 1wp5_A Topoisomerase IV; broke 32.3 2.6E+02 0.009 24.6 22.7 204 100-314 3-225 (323)
409 2pcq_A Putative dihydrodipicol 30.6 59 0.002 28.3 4.8 49 404-457 79-127 (283)
410 2vc6_A MOSA, dihydrodipicolina 30.4 61 0.0021 28.3 4.9 47 404-455 86-133 (292)
411 3l21_A DHDPS, dihydrodipicolin 30.3 58 0.002 28.7 4.8 48 404-456 101-149 (304)
412 2nxf_A Putative dimetal phosph 30.1 91 0.0031 27.1 6.2 44 415-459 223-269 (322)
413 3lab_A Putative KDPG (2-keto-3 29.3 52 0.0018 27.2 3.9 20 402-421 74-93 (217)
414 3b4u_A Dihydrodipicolinate syn 28.1 67 0.0023 28.1 4.8 48 404-456 89-141 (294)
415 1zvu_A Topoisomerase IV subuni 27.6 4.5E+02 0.015 26.2 10.7 157 144-314 470-633 (716)
416 3d03_A Phosphohydrolase; glyce 27.0 90 0.0031 26.4 5.5 47 412-458 148-198 (274)
417 2nyd_A UPF0135 protein SA1388; 26.0 97 0.0033 28.2 5.5 56 354-419 251-307 (370)
418 1o97_C Electron transferring f 25.7 45 0.0015 28.7 3.1 71 402-476 69-141 (264)
419 2ehh_A DHDPS, dihydrodipicolin 25.2 86 0.0029 27.4 4.9 48 404-456 86-134 (294)
420 2wkj_A N-acetylneuraminate lya 24.5 79 0.0027 27.8 4.5 48 404-456 97-146 (303)
421 2yci_X 5-methyltetrahydrofolat 23.6 1.1E+02 0.0037 26.4 5.1 50 396-456 80-133 (271)
422 2xmo_A LMO2642 protein; phosph 23.4 1.3E+02 0.0043 28.0 6.1 54 405-459 227-285 (443)
423 3m5v_A DHDPS, dihydrodipicolin 23.4 99 0.0034 27.1 5.0 48 404-456 94-142 (301)
424 3k13_A 5-methyltetrahydrofolat 23.0 1.1E+02 0.0039 26.7 5.2 52 395-457 85-142 (300)
425 2ojp_A DHDPS, dihydrodipicolin 22.8 72 0.0025 27.8 4.0 50 402-456 82-135 (292)
426 3kci_A Probable E3 ubiquitin-p 22.8 4.2E+02 0.014 23.8 36.1 248 57-314 64-345 (389)
427 1o5k_A DHDPS, dihydrodipicolin 22.0 1E+02 0.0035 27.1 4.8 49 404-457 98-147 (306)
428 3mcm_A 2-amino-4-hydroxy-6-hyd 22.0 89 0.003 29.1 4.5 52 394-457 269-324 (442)
429 3al9_A Plexin-A2; beta-propell 21.9 3.2E+02 0.011 26.3 8.5 70 182-251 402-476 (539)
430 3daq_A DHDPS, dihydrodipicolin 21.7 98 0.0034 27.0 4.6 48 404-456 88-136 (292)
431 3flu_A DHDPS, dihydrodipicolin 21.2 1.2E+02 0.004 26.6 5.0 48 404-456 93-141 (297)
432 1f6y_A 5-methyltetrahydrofolat 21.0 1.1E+02 0.0039 26.1 4.7 52 396-457 71-125 (262)
433 3tak_A DHDPS, dihydrodipicolin 20.9 1E+02 0.0036 26.8 4.6 49 404-457 87-136 (291)
434 3cpr_A Dihydrodipicolinate syn 20.8 1.2E+02 0.004 26.7 4.9 48 404-456 102-150 (304)
435 2nuw_A 2-keto-3-deoxygluconate 20.8 1E+02 0.0035 26.8 4.5 48 404-456 82-131 (288)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=360.89 Aligned_cols=316 Identities=58% Similarity=1.083 Sum_probs=268.3
Q ss_pred ccccccccccc-ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQG-RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~-~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.++++|++|.+ .|++++|+|+|++|++|+.|++|+|||+.++...
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~---------------------------------- 51 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI---------------------------------- 51 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE----------------------------------
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce----------------------------------
Confidence 46788999998 9999999999999999999999999998654321
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++|+.|+++++||+.++.......+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 52 ~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~i 131 (345)
T 3fm0_A 52 CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWV 131 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEE
Confidence 11222368999999999999999999999999999999988876678889999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||++......+...+..|...|.+++|+|++++|++|+.|+.|++||.+.... .....+.+|...|++++|+|++++|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l 209 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRL 209 (345)
T ss_dssp EEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEE
Confidence 99998766667778889999999999999999999999999999999886542 4567788999999999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
++++.|++|++||...+.....+........+.++.++.+.|...|++++|+|++..|++++.|+.|++|+....... .
T Consensus 210 ~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~-~ 288 (345)
T 3fm0_A 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP-Q 288 (345)
T ss_dssp EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCT-T
T ss_pred EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCc-c
Confidence 999999999999987666555544444456778888888866889999999999999999999999999999876422 2
Q ss_pred ceeeEEEeccccccccceeEEEecCCCC-CCCccc
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKTN 354 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~ 354 (479)
.+.+.+......+|...|++++|+|+++ +|++++
T Consensus 289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 2334444455578999999999999986 666554
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-46 Score=344.65 Aligned_cols=278 Identities=19% Similarity=0.289 Sum_probs=244.3
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+...++|++|.+.|++++|+|++++|++|+.||+|++||++++..+..+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~------------------------------- 51 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI------------------------------- 51 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------------------
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-------------------------------
Confidence 3567899999999999999999999999999999999999876654433
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
..|..+|.+++|+|++++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 52 ------~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 52 ------QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp ------ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ------eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 4688899999999999999999999999999999986 67788999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc--CC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IG 237 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 237 (479)
||+++.. .....+.+|...|.+++|+| ++..|++|+.|++|++||++..... ......|...+..+.|+| ++
T Consensus 124 Wd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 124 WNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp EEGGGTT--EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCSTTC
T ss_pred EECCCCc--chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcCCC
Confidence 9998764 34566789999999999999 6789999999999999999876542 223345678899999987 67
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
++|++|+.|++|++||++. .+++.++.+| ...|.+++|+|++++|++|+.||+|++||+.+++
T Consensus 199 ~~l~s~s~D~~i~iWd~~~---------------~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~- 261 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQT---------------KSCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK- 261 (304)
T ss_dssp CEEEEEETTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-
T ss_pred CEEEEEcCCCeEEEEeCCC---------------CccceeeCCC-CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-
Confidence 8999999999999999843 3678889997 7899999999999999999999999999999987
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
+...+..|...+.+++|+|++.
T Consensus 262 ---------~~~~~~~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 262 ---------VEKTLNVGLERSWCIATHPTGR 283 (304)
T ss_dssp ---------EEEEECCSSSSEEEEEECTTCG
T ss_pred ---------eeeeccCCCccEEEEEECCCCC
Confidence 4444467889999999999986
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-46 Score=358.50 Aligned_cols=279 Identities=26% Similarity=0.443 Sum_probs=251.7
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+|.+|.++|++++|+|++++|++|+.||+|+|||+.+++....+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l---------------------------------- 146 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL---------------------------------- 146 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE----------------------------------
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE----------------------------------
Confidence 4578899999999999999999999999999999999887765443
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+|...|.+++|+|++++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 147 ---~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 147 ---KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred ---eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 5789999999999999999999999999999999886 67788899999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI------- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 236 (479)
+++ .++..+.+|...|.++.|+|++++|++|+.|+.|++||++++.. ...+..|...|.+++|+|+
T Consensus 222 ~~~---~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTG---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCC---cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchh
Confidence 987 56677889999999999999999999999999999999987653 6678899999999999996
Q ss_pred -------------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 237 -------------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 237 -------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
+.+|++|+.|+.|++||++. ..++..+.+| ...|++++|+|++++|++|+.
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---------------~~~~~~~~~h-~~~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEET
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCC---------------CceEEEEECC-CCcEEEEEEcCCCCEEEEEeC
Confidence 67899999999999999843 3677888887 789999999999999999999
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
||.|++||+.+++ ....+.+|...|++++|+|++++|+.++
T Consensus 359 D~~i~vwd~~~~~----------~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 359 DKTLRVWDYKNKR----------CMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp TTEEEEECCTTSC----------CCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred CCeEEEEECCCCc----------eEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 9999999998876 3333468999999999999999997665
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.9e-45 Score=340.56 Aligned_cols=283 Identities=21% Similarity=0.352 Sum_probs=244.8
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|++|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+.. .+.+..+++++.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34678999999999999999999999999999999999988877665543 35677889999999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
+........ ......+|...|.++.|++++ .+++++.|++|++||+++++ ....+.+|...|.+++|+|+++++++
T Consensus 126 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 126 LKTREGNVR-VSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp TTTCSBSCE-EEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CccCCCcce-eEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECCCCCEEEE
Confidence 975432222 222346899999999999876 58999999999999999986 66788999999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCccEE
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVW 229 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~ 229 (479)
|+.||.|++||+++. .....+.+|...|++++|+|++++|++|+.||+|++||++.... +..+ ..+...|+
T Consensus 202 g~~d~~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~~~~~~~v~ 274 (340)
T 1got_B 202 GACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE----LMTYSHDNIICGIT 274 (340)
T ss_dssp EETTSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCTTCCSCEE
T ss_pred EeCCCcEEEEECCCC---eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE----EEEEccCCcccceE
Confidence 999999999999987 55677889999999999999999999999999999999987653 2333 33445799
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+++|+|++++|++|+.|+.|++||+... ..+..+.+| ..+|.+++|+|++.+|++|+.|+.|++
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~~~~~~~h-~~~v~~~~~s~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALKA---------------DRAGVLAGH-DNRVSCLGVTDDGMAVATGSWDSFLKI 338 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEECCCCeEEEEEcccC---------------cEeeEeecC-CCcEEEEEEcCCCCEEEEEcCCccEEe
Confidence 9999999999999999999999998443 456778887 789999999999999999999999999
Q ss_pred cc
Q psy14815 310 FK 311 (479)
Q Consensus 310 w~ 311 (479)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 96
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=340.49 Aligned_cols=281 Identities=20% Similarity=0.331 Sum_probs=244.7
Q ss_pred cccccccccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 4 SQTLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
.+.+++|.+.|++++|+|+ +++|+||+.|++|+|||+..++..
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~--------------------------------- 71 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD--------------------------------- 71 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---------------------------------
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---------------------------------
Confidence 4677899999999999984 679999999999999998643321
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
......+|...|.+++|++++.++++++.|++|++||+.+++ .+..+..+...+.+++|+|++++|++|+.||.|+
T Consensus 72 --~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 72 --LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVN 147 (321)
T ss_dssp --EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEE
T ss_pred --eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEE
Confidence 111236899999999999999999999999999999999996 5677888888999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+||+++. .....+..|...+.+++|+|++++|++|+.||.|++||+++++ .+..+.+|..+|.+++|+|++++
T Consensus 148 i~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 148 IFGVESG---KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK----LLHTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp EEETTTC---SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCCCEEEECTTSCE
T ss_pred EEEcCCC---ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc----EEEEEcccCCceeEEEEcCCCCE
Confidence 9999987 4455677788899999999999999999999999999998765 46778899999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++++.|+.|++||++.. .+...+.+| ...|.+++|+|++++|++++.|++|++||+.+++
T Consensus 221 l~s~s~dg~i~iwd~~~~---------------~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--- 281 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHA---------------NLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--- 281 (321)
T ss_dssp EEEECTTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---
T ss_pred EEEEcCCCeEEEEECCCc---------------ceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---
Confidence 999999999999998543 456778887 7899999999999999999999999999999886
Q ss_pred CceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++. .+.+|...|.+++|+|++++|+.++
T Consensus 282 ------~~~-~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 282 ------CVH-TFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp ------EEE-EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ------EEE-EEcCCCCcEEEEEECCCCCEEEEEe
Confidence 344 3468999999999999999887654
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=334.85 Aligned_cols=287 Identities=22% Similarity=0.327 Sum_probs=243.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc----------CCCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH----------GLPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|++|.+.|++++|+|++++|+||+.||+|++||..+++....+. ..+.+..+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 3467899999999999999999999999999999999988776654443 346788899999999999998
Q ss_pred CCCCCCc-eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCE
Q psy14815 72 KESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQF 148 (479)
Q Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~ 148 (479)
+...... .........+|...|.+++|+|++..|++++.|++|++||+++++ .+..+.+|...|.+++|+| ++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 8643211 111122235799999999999999999999999999999999987 6778899999999999988 5689
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
|++|+.||.|++||++++ .+...+..|...|++++|+|++++|++|+.|++|++||++.... ........+...+
T Consensus 213 l~sgs~Dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGA 287 (354)
T ss_dssp EEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCE
T ss_pred EEEEeCCCeEEEEECCCC---cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcCCCcccce
Confidence 999999999999999987 56677889999999999999999999999999999999987543 1122222344578
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++|+|++++|++|+.|+.|++||+... ..+..+.+| ...|++++|+|++++|++|+.||+|+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~~~~l~~h-~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKG---------------SRVSILFGH-ENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTC---------------SEEEEECCC-SSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCC---------------ceEEEEECC-CCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 99999999999999999999999998443 446677786 88999999999999999999999999
Q ss_pred Ecc
Q psy14815 309 IFK 311 (479)
Q Consensus 309 vw~ 311 (479)
+|+
T Consensus 352 vW~ 354 (354)
T 2pbi_B 352 VWA 354 (354)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-43 Score=355.66 Aligned_cols=328 Identities=16% Similarity=0.204 Sum_probs=256.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc--cccc----------CCCccceEEEeecC----Cc
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY--EKLH----------GLPVETSLRQLVED----KN 66 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~--~~~~----------~~~~~~~~~~~~~~----~~ 66 (479)
..++|.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++.. ..+. ..+++..+++.+.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 45678999999999999999999999999999999998754432 2222 23556667766654 47
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 145 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 145 (479)
+++||.... .....+|...|.+++|+|++. .|++|+.|++|++||..+++ ....+.+|...|.+++|+|+
T Consensus 131 v~~wd~~~~-------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 131 VFLFDTGTS-------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp EEETTTCCB-------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECTT
T ss_pred EEEeeCCCC-------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--EeeeeccccCceEEEEECCC
Confidence 889985421 112468999999999999986 69999999999999998875 56788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeeee-------ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce---
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVIN-------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW--- 215 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--- 215 (479)
+++|++|+.|+.|++||+.+++ ....+. +|...|.+++|+|++++|++++.|++|++||+++++...
T Consensus 202 g~~las~s~D~~i~lwd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 9999999999999999998874 333342 799999999999999999999999999999998654211
Q ss_pred ------------------------------------EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCC
Q psy14815 216 ------------------------------------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 216 ------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
.....+.+|...|++++|+|++++|++++.|++|++||+.....
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 279 VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 12234568999999999999999999999999999999876432
Q ss_pred CCCCCCCCCC------------------------------------------------------C---------------
Q psy14815 260 SAGIPTPDND------------------------------------------------------S--------------- 270 (479)
Q Consensus 260 ~~~~~~~~~~------------------------------------------------------~--------------- 270 (479)
...+...+.. .
T Consensus 359 ~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~ 438 (611)
T 1nr0_A 359 NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 438 (611)
T ss_dssp EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEE
T ss_pred eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEe
Confidence 1111000000 0
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
..+ +..+. +...+.+++|+|++++|++|+.|++|++||+..+. ...... .+|...|++++||||+++|
T Consensus 439 ~~~-~~~~~--~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~-------~~~~~~--~~h~~~v~~v~fspdg~~l 506 (611)
T 1nr0_A 439 HGK-LTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS-------VSEVKT--IVHPAEITSVAFSNNGAFL 506 (611)
T ss_dssp TTE-EEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE-------EEEEEE--EECSSCEEEEEECTTSSEE
T ss_pred CCc-eeeee--cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc-------eeeeec--cCCCCceEEEEECCCCCEE
Confidence 000 11111 24568899999999999999999999999997754 111222 5799999999999999999
Q ss_pred Cccc
Q psy14815 351 QKTN 354 (479)
Q Consensus 351 ~~~~ 354 (479)
+.+.
T Consensus 507 as~s 510 (611)
T 1nr0_A 507 VATD 510 (611)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7654
No 8
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-43 Score=326.14 Aligned_cols=300 Identities=35% Similarity=0.692 Sum_probs=236.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.++++|++|.+.|++++|+|+ +|++|+.|++|++||+..+.. ..
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~----------------------------------~~ 48 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF----------------------------------TL 48 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC----------------------------------EE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe----------------------------------EE
Confidence 467889999999999999987 999999999999999865321 01
Q ss_pred eEEe-ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-----eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 82 KAIL-SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 82 ~~~~-~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
.... ..+|...|.+++|+|++++|++|+.|++|++||+... .......+.+|...|.+++|+|++++|++|+.|
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 1111 1249999999999999999999999999999998542 123567788999999999999999999999999
Q ss_pred CcEEEEEeCCC-CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 156 KSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 156 g~i~vwd~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
+.|++||++.. ...+++..+.+|...|++++|+|++++|++|+.|++|++||...+. +.++..+.+|...|.+++|+
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEec
Confidence 99999999543 3345667788999999999999999999999999999999987543 24577889999999999999
Q ss_pred cC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 235 RI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 235 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+ +.+|++++.|++|++||+....... ...+.+...+.+.|...|++++|++++ +|++++.||.|++|+.
T Consensus 207 ~~~~~~~l~s~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 207 KTEGVFRLCSGSDDSTVRVWKYMGDDEDD-------QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp CSSSSCEEEEEETTSCEEEEEEEEECTTS-------CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred CCCCeeEEEEEeCCCeEEEEEecCCCccc-------cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 98 6789999999999999986543211 123455666666458899999999765 8999999999999998
Q ss_pred CCCCCCCCceeeEEEecccccccc-ceeEEEecC--CCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQ-DVNCVAWNP--VVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~sp--~~~~l~~~~ 354 (479)
..++ +.+......+|.. .|++++|+| ++++|++++
T Consensus 279 ~~~~-------~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 279 VDGE-------WKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp ETTE-------EEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred CCCc-------eEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 7653 1123334457876 899999999 688887654
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.8e-43 Score=354.90 Aligned_cols=326 Identities=18% Similarity=0.205 Sum_probs=255.3
Q ss_pred ccccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEec
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~ 71 (479)
+..+|.+|.+.|++++|+|+++ +|++|+.|++|++||..+++....+..| +++..+++++.|+++++||
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 3467899999999999999987 5999999999999999887766666554 5677899999999999999
Q ss_pred CCCCCCceeeeE--EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE-----------------------
Q psy14815 72 KESFGNKFTAKA--ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC----------------------- 126 (479)
Q Consensus 72 ~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~----------------------- 126 (479)
............ ....+|...|.+++|+|++++|++++.|++|++||+.+++...
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 874322111000 0012799999999999999999999999999999998875321
Q ss_pred ------------------eEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee---------------
Q psy14815 127 ------------------NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA--------------- 173 (479)
Q Consensus 127 ------------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------- 173 (479)
...+.+|...|.+++|+|++++|++++.|+.|++||+.++.......
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 23456899999999999999999999999999999987643211000
Q ss_pred ------------------------------e----------------------------------eeccccceeEEEEec
Q psy14815 174 ------------------------------V----------------------------------INAHIQDVKKVRFHP 189 (479)
Q Consensus 174 ------------------------------~----------------------------------~~~~~~~v~~l~~~~ 189 (479)
. ...|...+.+++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0 001234578999999
Q ss_pred CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC
Q psy14815 190 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 269 (479)
Q Consensus 190 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 269 (479)
++++|++|+.|++|++||+..... ..... ..|...|++++|+|++++|++++.|++|++||+....
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~--~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~----------- 524 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASV--SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF----------- 524 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEE--EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-----------
T ss_pred CCCEEEEeCCCCeEEEEEccCCce--eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-----------
Confidence 999999999999999999976432 22333 6799999999999999999999999999999986522
Q ss_pred CceEEEEE-EeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc-ccceeEEEecCCC
Q psy14815 270 SVWKCVCT-LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVV 347 (479)
Q Consensus 270 ~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~ 347 (479)
++... ..+.|...|.+++|+|++++|++|+.|++|++|++..+.. .......+| ...|++++|+|++
T Consensus 525 ---~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~--------~~~~~~~~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 525 ---ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD--------HPIIIKGAHAMSSVNSVIWLNET 593 (611)
T ss_dssp ---EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS--------CCEEETTSSTTSCEEEEEEEETT
T ss_pred ---ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc--------ccchhhccCcccCeeEEEEcCCC
Confidence 11111 1221478999999999999999999999999999987641 121335688 8999999999999
Q ss_pred CCCCccc
Q psy14815 348 PEPQKTN 354 (479)
Q Consensus 348 ~~l~~~~ 354 (479)
+ |++++
T Consensus 594 ~-l~s~~ 599 (611)
T 1nr0_A 594 T-IVSAG 599 (611)
T ss_dssp E-EEEEE
T ss_pred E-EEEec
Confidence 8 75543
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-42 Score=320.91 Aligned_cols=287 Identities=23% Similarity=0.382 Sum_probs=238.7
Q ss_pred cccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+..+|+||.+.|++++|+|++ ++|+||+.|++|++|++...... ..
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--------------------------------~~ 55 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--------------------------------FG 55 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--------------------------------EE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--------------------------------cc
Confidence 4677899999999999999965 89999999999999998543211 01
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++|+.|++|++||+.+++ ....+.+|...|.+++|+|++.+|++|+.|+.|++
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 1122346899999999999999999999999999999999996 67788999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecC------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPF------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||++. .....+.+|...|.+++|+|. +..+++++.|+.|++||+++.. ....+.+|...|.+++|+
T Consensus 134 wd~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 134 WTIKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHNSNINTLTAS 205 (319)
T ss_dssp EETTS----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE----EEEEECCCCSCEEEEEEC
T ss_pred EECCC----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch----hheeecCCCCcEEEEEEc
Confidence 99975 455677889999999999985 4489999999999999998654 366788999999999999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
|++++|++++.||.|++||+... +++..+.. ...|.+++|+|++.+|++++. +.+++|++..
T Consensus 206 p~g~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~ 267 (319)
T 3frx_A 206 PDGTLIASAGKDGEIMLWNLAAK---------------KAMYTLSA--QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDP 267 (319)
T ss_dssp TTSSEEEEEETTCEEEEEETTTT---------------EEEEEEEC--CSCEEEEEECSSSSEEEEEET-TEEEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---------------cEEEEecC--CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCc
Confidence 99999999999999999998443 55666665 458999999999999988875 5699999987
Q ss_pred CCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.. ....+.. ....|...+.+++|+|||++|+.+.
T Consensus 268 ~~------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 268 QY------LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EE------EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred Ce------eeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 54 0001111 1234567899999999999997654
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-43 Score=336.94 Aligned_cols=290 Identities=20% Similarity=0.337 Sum_probs=241.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~ 72 (479)
+.++|+||.+.|++++|+|++++|+||+.||+|+|||+.+++....+..+ +++..+++++.|+.+++|++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 46789999999999999999999999999999999999988876665543 66788999999999999998
Q ss_pred CCCCCce--eeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEE-----eCCCCcEEEEEEcC
Q psy14815 73 ESFGNKF--TAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATL-----EGHENEVKSVTWSK 144 (479)
Q Consensus 73 ~~~~~~~--~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~l~~~~ 144 (479)
....... ........+|...|.++.|+|+ +..|++|+.|++|++||+++++ .+..+ .+|...|.+++|++
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEECS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEeec
Confidence 7432111 1112234689999999999996 4679999999999999999987 34444 57889999999987
Q ss_pred -CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 145 -NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 145 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
++++|++|+.||.|++||++... .....+.+|...|++++|+|++++|++|+.||+|++||++++.. +..+..
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~----~~~~~~ 289 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ----LQVYNR 289 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE----EEEECC
T ss_pred CCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE----EEEecc
Confidence 88999999999999999998543 45667889999999999999999999999999999999997653 333322
Q ss_pred -------CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE----eccccccEEEEEec
Q psy14815 224 -------HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL----SGHHGRTIYDISWC 292 (479)
Q Consensus 224 -------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~l~~~ 292 (479)
+...|++++|+|++++|++|+.||.|++||+... +.+..+ .+ |...|++++|+
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~---------------~~~~~~~~~~~~-h~~~v~~l~~s 353 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA---------------EMVLNLGTLQNS-HEGRISCLGLS 353 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC---------------CEEEEECCSCSS-CCCCCCEEEEC
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC---------------ceEEEEecccCC-CCCceEEEEEC
Confidence 2335899999999999999999999999998543 223333 34 48899999999
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++++|++|+.|++|++|++....
T Consensus 354 ~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 354 SDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999999987654
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.8e-42 Score=319.14 Aligned_cols=282 Identities=26% Similarity=0.441 Sum_probs=241.5
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+..++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------------------------------- 61 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------------------------------- 61 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------------
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh--------------------------------
Confidence 346788999999999999999999999999999999998765543322
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+|++++|++++.|+.|++||+++++ .+..+.+|...|.+++|+|++++|++|+.||.|++|
T Consensus 62 -----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw 134 (312)
T 4ery_A 62 -----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134 (312)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred -----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 5788999999999999999999999999999999986 667888999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee-ecCCCccEEEEEEccCCCEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 240 (479)
|+++. .....+..|..+|.+++|+|++++|++++.||.|++||++++.. +.. ...+...+..++|+|++++|
T Consensus 135 d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 135 DVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp ETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCSSCCCEEEEEECTTSSEE
T ss_pred ECCCC---EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce----eeEEeccCCCceEEEEECCCCCEE
Confidence 99987 55667888999999999999999999999999999999997653 333 34567789999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc--cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
++++.|+.|++||++.. +++..+.+|... .+......+++.+|++|+.||.|++||+.+++
T Consensus 208 ~~~~~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-- 270 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKG---------------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-- 270 (312)
T ss_dssp EEEETTTEEEEEETTTT---------------EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--
T ss_pred EEEcCCCeEEEEECCCC---------------cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--
Confidence 99999999999998443 556777776322 22233334678899999999999999999887
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+...+.+|...|.+++|+|+++.|+.+.
T Consensus 271 --------~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 271 --------IVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp --------EEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred --------hhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 4445578999999999999999887653
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-42 Score=326.91 Aligned_cols=287 Identities=16% Similarity=0.215 Sum_probs=225.6
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC------CCcEEEEecccccccccccC----C---------CccceEEEeecCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE------DKNIRLWVMVIREPYEKLHG----L---------PVETSLRQLVEDK 65 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~------dg~v~iwd~~~~~~~~~~~~----~---------~~~~~~~~~~~~~ 65 (479)
....+|++.|++++|+|||++|++|+. |++|++|+..++.+...+.. + ..+..+++++.++
T Consensus 36 ~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 36 TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp ----CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTS
T ss_pred CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCC
Confidence 345679999999999999999999997 78899999877665433321 1 1234577788999
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 145 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 145 (479)
+|++||+........ ......+|...|++++|+|++++|++|+.|+.|++||+++++ .+..+.+|...|.+++|+++
T Consensus 116 ~v~lWd~~~~~~~~~-~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLV-NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CC-CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEE-EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEccC
Confidence 999999985332221 222345899999999999999999999999999999999986 67888999999999999998
Q ss_pred CC-EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 146 GQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 146 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
+. ++++++.||.|++||+++++... ......+...+++++|+|+ +.+|++|+.|+.|++||+++++. ...+..
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~----~~~~~~ 267 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS----AQTSAV 267 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG----CEEECC
T ss_pred CCceeeeeccCCceEEEECCCCceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE----eEEEec
Confidence 75 78999999999999999875322 2234456778999999997 57899999999999999997764 677889
Q ss_pred CCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEE
Q psy14815 224 HTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA 301 (479)
Q Consensus 224 ~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~ 301 (479)
|...|++++|+|++ ++|++|+.|++|+|||++.. +++.. .+| ...|++++|+| ++.+|+++
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---------------~~~~~-~~H-~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---------------EVFRD-LSH-RDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------------EEEEE-CCC-SSCEEEEEECSSSTTEEEEE
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------------cEeEE-CCC-CCCEEEEEEeCCCCCEEEEE
Confidence 99999999999987 57899999999999998432 44443 355 78999999998 78999999
Q ss_pred eCCCeEEEcccCCCC
Q psy14815 302 CGDDAIRIFKENPEA 316 (479)
Q Consensus 302 ~~dg~i~vw~~~~~~ 316 (479)
+.||+|++|++....
T Consensus 331 s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 331 GWDHKVLHHHLPSEG 345 (357)
T ss_dssp ETTSCEEEEECC---
T ss_pred cCCCeEEEEECCCCC
Confidence 999999999997654
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=322.92 Aligned_cols=287 Identities=14% Similarity=0.213 Sum_probs=225.5
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
...|...|.+++|+|||++|++++ |+++|+||... .+|+........ ......
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~-------------------------~~~~~~~~~~~~-~~~~~~ 78 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSL-------------------------WLFKDPCAAPNE-GFCSAG 78 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEE-------------------------EEESSGGGTTCG-GGCSEE
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeecee-------------------------eeeccccccCCc-ceeeee
Confidence 456788899999999999999887 77899997421 122111100000 000111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE--eEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+...|.+++|+|++ .|++|+.||+|+|||+.+++... ...+.+|.+.|++++|+|++++|++|+.||.|++||++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3466789999999985 78899999999999999886322 23456899999999999999999999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s 242 (479)
++ +.+..+.+|...|++++|+|++ .+|++++.|++|++||+++++.. .......|...+.+++|+|+ +++|++
T Consensus 158 ~~---~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 158 QQ---VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp TT---EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEE
T ss_pred CC---cEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEE
Confidence 87 6778889999999999999987 57899999999999999987641 11223456678999999985 567889
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
|+.||.|++||++.. +++.++.+| ...|++++|+|++ ++|++|+.|++|+|||+.+++
T Consensus 233 g~~dg~v~~wd~~~~---------------~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~----- 291 (344)
T 4gqb_B 233 GDENGTVSLVDTKST---------------SCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE----- 291 (344)
T ss_dssp EETTSEEEEEESCC-----------------CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-----
T ss_pred eccCCcEEEEECCCC---------------cEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-----
Confidence 999999999998543 446778887 8899999999997 589999999999999998876
Q ss_pred eeeEEEeccccccccceeEEEecCCCCCC-Ccc
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWNPVVPEP-QKT 353 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~~~ 353 (479)
+.. ..+|.+.|++++|+|+++.| +++
T Consensus 292 -----~~~-~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 292 -----LFR-SQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp -----EEE-ECCCSSCEEEEEECSSSTTEEEEE
T ss_pred -----EEE-EcCCCCCEEEEEEeCCCCeEEEEE
Confidence 333 35899999999999999865 444
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-41 Score=342.85 Aligned_cols=305 Identities=32% Similarity=0.523 Sum_probs=261.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~ 72 (479)
+++++.+|...|++++|+|++++|++++.|++|++||.. ++....+.. .+++..+++++.++.+++|+.
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 456788999999999999999999999999999999964 344333333 356778889999999999997
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
.. . ......+|...|.+++|+|+++++++++.|+.|++||... + ....+.+|...|.+++|+|++++|+++
T Consensus 333 ~~--~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~ 403 (577)
T 2ymu_A 333 NG--Q----HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASA 403 (577)
T ss_dssp TS--C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-C--EEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CC--C----eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-C--EEEEecCCCCCeEEEEECCCCCEEEEE
Confidence 63 1 1223468999999999999999999999999999999654 3 567788999999999999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.|+.|++||... +....+..|...|++++|+|++++|++++.|+.|++||... ..+..+.+|...|++++
T Consensus 404 ~~d~~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~ 474 (577)
T 2ymu_A 404 SDDKTVKLWNRNG----QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVA 474 (577)
T ss_dssp ETTSEEEEECTTC----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEE
T ss_pred eCCCEEEEEeCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-----CEEEEEcCCCCCEEEEE
Confidence 9999999999643 45667889999999999999999999999999999999753 23667889999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|++++|++++.|+.|++||.. .+++..+.+| ...|++++|+|++++|++++.||.|++||.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~----------------~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRN----------------GQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETT----------------SCEEEEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCEEEEEeCCCEEEEEcCC----------------CCEEEEEeCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 99999999999999999999952 2457788887 789999999999999999999999999996
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++ ++. .+.+|.++|++++|+||+++|++++
T Consensus 538 ~-~~---------~~~-~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 538 N-GQ---------LLQ-TLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp T-SC---------EEE-EEECCSSCEEEEEECTTSSCEEEEE
T ss_pred C-CC---------EEE-EEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 4 33 233 3468999999999999999997654
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-41 Score=320.05 Aligned_cols=295 Identities=22% Similarity=0.335 Sum_probs=233.6
Q ss_pred cccccccccccceEEEEE-----CC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSW-----NP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~-----s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
.+..+|+||.+.|++++| ++ ++++|+||+.|++|++||+..++.....
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~-------------------------- 65 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF-------------------------- 65 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS--------------------------
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc--------------------------
Confidence 356789999999999999 77 8999999999999999998654321110
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
........+|...|.+++|+|++.++++|+.|++|++||+++++ ....+.+|...|.+++|+|++++|++++.|
T Consensus 66 ----~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 66 ----GIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp ----EEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETT
T ss_pred ----ccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCC
Confidence 11122346899999999999999999999999999999999986 667888999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC----------CEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----------NILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
+.|++||+.... .........|...|.+++|+|++ .+|++++.||.|++||... .....+.+|.
T Consensus 140 ~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~ 213 (343)
T 2xzm_R 140 REIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHE 213 (343)
T ss_dssp SCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCS
T ss_pred CEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCcc
Confidence 999999998531 11222233688899999999986 7899999999999999542 3456778999
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
..|.+++|+|++++|++|+.||.|++||+...... ...+.. ...|.+++|+|++++++++ .|+
T Consensus 214 ~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~--------------~~~~~~--~~~v~~v~~sp~~~~la~~-~d~ 276 (343)
T 2xzm_R 214 SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP--------------QREFDA--GSTINQIAFNPKLQWVAVG-TDQ 276 (343)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC--------------SEEEEC--SSCEEEEEECSSSCEEEEE-ESS
T ss_pred ccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc--------------ceeecC--CCcEEEEEECCCCCEEEEE-CCC
Confidence 99999999999999999999999999998543221 122222 4579999999999887655 588
Q ss_pred eEEEcccCCCCCCCCceeeEEE------eccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLV------HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~------~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|++|++.+++... ...+. .....+|...|++++|+|++++|+.+.
T Consensus 277 ~v~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 277 GVKIFNLMTQSKAP---VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp CEEEEESSSCCSCS---EEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CEEEEEeCCCCCCc---eEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 89999998765211 00000 001136888999999999999997664
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-42 Score=317.74 Aligned_cols=248 Identities=22% Similarity=0.376 Sum_probs=225.1
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..++.+|...|++++|++++.++++++.|++|++||+.+++.+..+
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~---------------------------------- 118 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI---------------------------------- 118 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE----------------------------------
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE----------------------------------
Confidence 4568999999999999999999999999999999999877665443
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..+...+.+++|+|++++|++|+.||.|++||+++++ ....+..|...|.+++|+|++++|++|+.||.|++||+
T Consensus 119 ---~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~ 193 (321)
T 3ow8_A 119 ---DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 193 (321)
T ss_dssp ---ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ---eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3566788899999999999999999999999999987 56677888999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+++ +.+..+.+|..+|++++|+|++++|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|++++|+++
T Consensus 194 ~~~---~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 194 ATG---KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp TTT---EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCC---cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEE
Confidence 987 66777889999999999999999999999999999999987653 67788999999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+.|++|++||+. ..+++.++.+| ...|.+++|+|++++|++++.||.|++||..
T Consensus 267 s~D~~v~iwd~~---------------~~~~~~~~~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 267 SSDKSVKVWDVG---------------TRTCVHTFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ETTSCEEEEETT---------------TTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred eCCCcEEEEeCC---------------CCEEEEEEcCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999984 33678888887 7899999999999999999999999999963
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-41 Score=327.70 Aligned_cols=249 Identities=29% Similarity=0.550 Sum_probs=224.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++++|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~--------------------------------- 188 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM--------------------------------- 188 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC---------------------------------
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE---------------------------------
Confidence 46789999999999999999999999999999999999776655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|.+++|+|++++|++|+.|++|++||+++++ ++..+.+|...|.++.|+|++.+|++|+.||.|++||
T Consensus 189 ----~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 189 ----HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp ----CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 5788999999999999999999999999999999986 6778899999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecC--------------------CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPF--------------------DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+++. .....+..|...|.+++|+|+ +.+|++|+.|+.|++||++++. ++..+.
T Consensus 263 ~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~----~~~~~~ 335 (410)
T 1vyh_C 263 VATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----CLMTLV 335 (410)
T ss_dssp TTTC---CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE----EEEEEE
T ss_pred CCCC---ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc----eEEEEE
Confidence 9887 556678899999999999996 6789999999999999999765 467788
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+|...|.+++|+|++++|++|+.|+.|++||+... +++..+.+| ...|++++|+|++.+|++|+
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---------------~~~~~~~~h-~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---------------RCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---------------CCCEEEECC-SSCEEEEEECSSSSCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------------ceEEEEcCC-CCcEEEEEEcCCCCEEEEEe
Confidence 99999999999999999999999999999998543 335677776 78999999999999999999
Q ss_pred CCCeEEEcccC
Q psy14815 303 GDDAIRIFKEN 313 (479)
Q Consensus 303 ~dg~i~vw~~~ 313 (479)
.||+|++|+++
T Consensus 400 ~D~~i~vW~~r 410 (410)
T 1vyh_C 400 VDQTVKVWECR 410 (410)
T ss_dssp TTSEEEEEC--
T ss_pred CCCcEEEEeCC
Confidence 99999999863
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.6e-41 Score=307.57 Aligned_cols=260 Identities=24% Similarity=0.437 Sum_probs=218.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc--cccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR--EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+..+.+|.+.|++++|+|+|++|+||+.|++|+|||+..+ +.+.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~---------------------------------- 47 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID---------------------------------- 47 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE----------------------------------
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE----------------------------------
Confidence 4568899999999999999999999999999999998642 2211
Q ss_pred eEEeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~ 157 (479)
.+.+|..+|.+++|+++ +++|++|+.|++|++||+++++......+..|...|.+++|+|+ +.+|++++.||.
T Consensus 48 ---~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 48 ---TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp ---EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred ---EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 12689999999999874 89999999999999999998765566778889999999999997 889999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecC-------------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-------------DNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
|++||++..... ....+..|...|.+++|+|+ +++|++|+.|++|++||++++...+.....+.+|
T Consensus 125 v~~wd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 125 VSVVEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEBCSSSCB-CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEecCCCce-eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 999999876322 23457789999999999996 5799999999999999998766544566788999
Q ss_pred CccEEEEEEccCC---CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEE
Q psy14815 225 TSTVWSLAFDRIG---SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 225 ~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~ 299 (479)
...|.+++|+|++ ++|++++.|++|++||++..... +. ...+ .. +...|.+++|+|++++|+
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-----------~~-~~~~~~~~-~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-----------WK-KTLLKEEK-FPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-----------CE-EEESSSSC-CSSCEEEEEECSSSCCEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-----------cc-eeeeeccc-CCCcEEEEEECCCCCEEE
Confidence 9999999999984 89999999999999998653211 01 1122 23 367899999999999999
Q ss_pred EEeCCCeEEEcccCC
Q psy14815 300 TACGDDAIRIFKENP 314 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~ 314 (479)
+++.||.|++|+...
T Consensus 271 s~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 271 LSGGDNKVTLWKENL 285 (297)
T ss_dssp EEETTSCEEEEEECT
T ss_pred EEcCCCcEEEEEECC
Confidence 999999999999864
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-40 Score=334.10 Aligned_cols=305 Identities=31% Similarity=0.528 Sum_probs=260.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~ 72 (479)
.++++.+|...|++++|+|++++|++++.|+.|++||.. ++.+..+.. .+++..+++++.++.+++|+.
T Consensus 213 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~ 291 (577)
T 2ymu_A 213 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR 291 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence 456788999999999999999999999999999999964 444444333 356778888999999999997
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
.. . ......+|...|.+++|+|+++++++++.|+.|++||.... ....+.+|...+.+++|+|++++++++
T Consensus 292 ~~--~----~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 292 NG--Q----LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDGQTIASA 362 (577)
T ss_dssp TS--C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CC--c----EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 52 1 12234689999999999999999999999999999998766 356778899999999999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.||.+++||... +.+..+..|...|++++|+|++++|++++.|+.|++||... ..+..+.+|...|++++
T Consensus 363 ~~dg~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-----~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 363 SDDKTVKLWNRNG----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp ETTSEEEEEETTC----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-----CEEEEEECCSSCEEEEE
T ss_pred eCCCEEEEEcCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----CEEEEecCCCCCeEEEE
Confidence 9999999999643 45667888999999999999999999999999999999643 23667889999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|++++|++++.|+.|++||.. .+.+..+.+| ...|++++|+|++++|++++.|+.|++|+.
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~----------------~~~~~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRN----------------GQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETT----------------SCEEEEEECC-SSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCEEEEEECC----------------CCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 99999999999999999999952 1446777786 789999999999999999999999999996
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++ ++. .+.+|...|++++|+|++++|+.+.
T Consensus 497 ~-~~---------~~~-~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 497 N-GQ---------LLQ-TLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp T-SC---------EEE-EEECCSSCEEEEEECTTSSCEEEEE
T ss_pred C-CC---------EEE-EEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 4 33 233 3468999999999999999997764
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-41 Score=319.83 Aligned_cols=298 Identities=20% Similarity=0.308 Sum_probs=229.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+|.+.|++++|+|+|++|++|+ ++++++|++.+++.+..+..+.... .+. ..........
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~-------------~~~------~~~~~~~~~~ 121 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN-------------KDP------ENLNTSSSPS 121 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------------------C
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc-------------ccc------ccccccccCC
Confidence 6999999999999999999987 6899999999888766554321100 000 0000011123
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
+...|.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-- 197 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-- 197 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--
Confidence 45579999999999999999999999999999986 66788999999999999999999999999999999999987
Q ss_pred eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEe---eeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 169 YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWIN---FATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
+....+. +...+.+++|+| ++++|++|+.||.|++||++++...... .....+|...|.+++|+|++++|++|+
T Consensus 198 -~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 198 -QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp -EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred -eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 3333333 556799999999 8999999999999999999876531111 011257999999999999999999999
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
.|+.|++||++.......... .....+...+.+| ...|.+++|+|++++|++|+.|+.|++||..+++
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~---~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~-------- 343 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKT---PNSGTCEVTYIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN-------- 343 (393)
T ss_dssp TTSEEEEEEC------------------CEEEEEECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--------
T ss_pred CCCEEEEEECCCCCCcccccC---CCCCcceEEEecc-cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--------
Confidence 999999999976543221111 1223456677787 7799999999999999999999999999999887
Q ss_pred EEEeccccccccceeEEEecCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
....+.+|...|.+++|+|+
T Consensus 344 --~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 344 --PLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp --EEEEEECCSSCEEEEEECSS
T ss_pred --EEEEECCCCCCEEEEEecCC
Confidence 33445689999999999874
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=308.90 Aligned_cols=250 Identities=18% Similarity=0.253 Sum_probs=207.1
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|...|++++|+|++ .|++|+.||+|+|||+.+++.+... .....+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~---------------------------------~~~~~~ 125 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVS---------------------------------KFCKYE 125 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEE---------------------------------EEEEEC
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEe---------------------------------eccccC
Confidence 356789999999985 7889999999999999877654332 122358
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 167 (479)
|...|++++|+|++++|++|+.|++|++||+++++ .+..+.+|...|.+++|++++. +|++++.||.|++||+++.+
T Consensus 126 H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 126 HDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 99999999999999999999999999999999996 6788999999999999999874 78999999999999999874
Q ss_pred ceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEeeC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSD 245 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~ 245 (479)
....+ ....+...+.+++|+|+ +++|++|+.||.|++||+++++. +..+.+|...|++++|+|++ ++|++|+.
T Consensus 204 ~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 204 PASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp CEEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 33222 22345667899999994 57889999999999999997664 77889999999999999998 57899999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++|++||+... + +..+.+| ...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 279 D~~i~vwd~~~~---------------~-~~~~~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 279 DCSLAVLDSSLS---------------E-LFRSQAH-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TSCEEEECTTCC---------------E-EEEECCC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCeEEEEECCCC---------------c-EEEEcCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999997432 2 3456776 88999999999986 56789999999999998764
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-40 Score=309.81 Aligned_cols=263 Identities=24% Similarity=0.464 Sum_probs=212.2
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
...+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++... ..
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-----------------------------------~~ 50 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-----------------------------------LI 50 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-----------------------------------EE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-----------------------------------EE
Confidence 3456799999999999999999999999999999998654321 01
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEE
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVW 159 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~ 159 (479)
..+.+|...|.+++|++ ++++|++|+.|++|++||+++++......+.+|...|.+++|+|+ +.+|++|+.||.|+
T Consensus 51 ~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 51 ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 11358999999999986 489999999999999999998765566778899999999999997 78999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecC-----------------CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPF-----------------DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+||++..........+..|...+.+++|+|+ +++|++|+.|+.|++||++... .+.....+.
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~ 209 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLE 209 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCB
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecc
Confidence 9999876544445567789999999999997 4689999999999999997543 234567788
Q ss_pred CCCccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 223 SHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
+|...|.+++|+|++ ++|++++.|++|++|++....... .. ...+..| ...|.+++|+|++++|
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~--------~~---~~~~~~~-~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT--------WS---PKLLHKF-NDVVWHVSWSITANIL 277 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC--------CB---CCEEEEC-SSCEEEEEECTTTCCE
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc--------hh---hhhhhcC-CCcEEEEEEcCCCCEE
Confidence 999999999999986 789999999999999986532110 00 1123344 7799999999999999
Q ss_pred EEEeCCCeEEEcccCC
Q psy14815 299 ATACGDDAIRIFKENP 314 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~ 314 (479)
++++.|+.|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999764
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.8e-39 Score=301.76 Aligned_cols=294 Identities=24% Similarity=0.346 Sum_probs=236.5
Q ss_pred cccccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+..+|+||++.|++|+|+|+ +++|+|||.||+|+|||+.+.+....
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-------------------------------- 76 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-------------------------------- 76 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE--------------------------------
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc--------------------------------
Confidence 345689999999999999997 68999999999999999876543211
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++++.|+.|++|+..... .......+...+..+.+++++.+|++++.|+.+++
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 1122246899999999999999999999999999999999886 45666678888999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCC--CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
||+.... ........|...+.+++|++++ .++++++.|+.|++||+++.. ....+.+|...|++++|+|+++
T Consensus 155 ~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~----~~~~~~~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 155 WNTLGVC--KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK----LKTNHIGHTGYLNTVTVSPDGS 228 (340)
T ss_dssp ECTTSCE--EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS
T ss_pred EEeCCCc--eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc----eeeEecCCCCcEEEEEECCCCC
Confidence 9987653 3344567888999999998864 578899999999999999765 3677889999999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
+|++|+.||.|++||++.. +++..+.. ...|.+++|+|++.+ ++++.|+.|++||++.+...
T Consensus 229 ~l~s~s~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 229 LCASGGKDGQAMLWDLNEG---------------KHLYTLDG--GDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp EEEEEETTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEEeccC---------------ceeeeecC--CceEEeeecCCCCce-eeccCCCEEEEEECCCCeEE
Confidence 9999999999999998433 55666665 458999999998755 55667999999999876410
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.. ...........+|...|++++|+|++++|+.++
T Consensus 291 ~~-~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 291 DE-LKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EE-ECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred Ee-ccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 00 000011222357889999999999999997664
No 25
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.5e-40 Score=316.31 Aligned_cols=308 Identities=15% Similarity=0.203 Sum_probs=247.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC---------CCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG---------LPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++++|+|++++|++++.||.|++||+.+++....+.. .+++..+++++.++.+++|++... ..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~ 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-----LQ 131 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSC-----EE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCc-----ce
Confidence 3455899999999999999999999999988776655443 255678888999999999998731 12
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.....+|...|++++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 23346899999999999999999999999999999999886 5677889999999999999999999999999999999
Q ss_pred eCCCCceeeeeeee---ccc---------------------cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 163 VGEEDEYECAAVIN---AHI---------------------QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 163 ~~~~~~~~~~~~~~---~~~---------------------~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
+++++ ....+. .+. ..+.+++|+|++++|++|+.||.|++||++++.. ..
T Consensus 210 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~ 283 (420)
T 3vl1_A 210 CGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ---TI 283 (420)
T ss_dssp TTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE---EE
T ss_pred CCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce---eE
Confidence 99874 333343 233 3444555678999999999999999999997663 23
Q ss_pred eeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 219 ATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
.....|...|.+++|+|+++ +|++++.||.|++||++.... ++..+..|+...|.++.| +++++
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--------------~~~~~~~~~~~~v~~~~~-~~~~~ 348 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC--------------PVGEFLINEGTPINNVYF-AAGAL 348 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--------------CSEEEEESTTSCEEEEEE-ETTEE
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--------------chhhhhccCCCCceEEEe-CCCCE
Confidence 33456889999999999998 999999999999999976543 135666766888999965 57889
Q ss_pred EEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 298 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
|++++.||.|++|++............... .....|...|.+++|+|+++
T Consensus 349 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDPESERPAIEFETP-TFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EEEETTTEEEEEEEECCTTCCSCEECTTSC-EEECCSSCCCCEEEEECCSS
T ss_pred EEEecCCccEEEEeccCCCCCccceeccCc-cEEccCCcceEEEEEccCCC
Confidence 999999999999999875432211111001 11346888999999999998
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=301.38 Aligned_cols=266 Identities=26% Similarity=0.517 Sum_probs=217.4
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..+|.+.|++++|+|++++|++|+.|++|++||+..+... .....
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~-----------------------------------~~~~~ 101 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE-----------------------------------CVTTL 101 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE-----------------------------------EEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE-----------------------------------EEEEc
Confidence 3689999999999999999999999999999997643210 11123
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...|.+++|+|++++|++|+.|++|++||+.++. ......+.+|...|.+++|+|++++|++|+.|+.|++||.+.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 6899999999999999999999999999999998753 345677889999999999999999999999999999999987
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-----------cceEeeeeecC-CCccEEEEEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-----------ADWINFATLKS-HTSTVWSLAF 233 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~-~~~~v~~~~~ 233 (479)
.. ..+...+.+|...|++++|+|++++|++|+.|++|++||..... ..+.++..+.+ |...|.+++|
T Consensus 182 ~~-~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 260 (345)
T 3fm0_A 182 DD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW 260 (345)
T ss_dssp TE-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE
T ss_pred CC-EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE
Confidence 53 23456788999999999999999999999999999999974322 12233445554 8899999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE-EeccccccEEEEEecCCCC-eEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~ 311 (479)
+|++..|++++.|+.|++|+......... ........ ..+| ...|++++|+|++. +|++|+.||+|++|+
T Consensus 261 ~~~~~~l~s~~~d~~i~vw~~~~~~~~~~-------~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 261 CQLTGALATACGDDAIRVFQEDPNSDPQQ-------PTFSLTAHLHQAH-SQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp CTTTCCEEEEETTSCEEEEEECTTSCTTS-------CCEEEEEEETTSS-SSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred ecCCCEEEEEeCCCeEEEEEeCCCCCcce-------eeEEEEeeecccc-cCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 99999999999999999999865432211 12222222 3354 88999999999974 999999999999999
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
+..++
T Consensus 333 ~~~~~ 337 (345)
T 3fm0_A 333 YQRPE 337 (345)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 98876
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.4e-39 Score=297.70 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=213.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++|++|...|++++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~--------------------------------- 103 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRF--------------------------------- 103 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---------------------------------
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEE---------------------------------
Confidence 35688999999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC------CCEEEEEeCCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSRDK 156 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~~~~~dg 156 (479)
.+|...|.+++|+|++.+|++|+.|++|++||++.. ....+.+|...|.++.|+|. +..+++++.|+
T Consensus 104 ----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 104 ----VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp ----ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECCC------CCEEEEEETTS
T ss_pred ----ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 578999999999999999999999999999999765 56778899999999999984 44899999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
.|++||++.. .....+.+|...|++++|+|++++|++|+.||.|++||+++.+. +..+.. ...|.+++|+|+
T Consensus 177 ~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~~-~~~v~~~~~sp~ 248 (319)
T 3frx_A 177 MVKAWNLNQF---QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA----MYTLSA-QDEVFSLAFSPN 248 (319)
T ss_dssp CEEEEETTTT---EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE----EEEEEC-CSCEEEEEECSS
T ss_pred EEEEEECCcc---hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEecC-CCcEEEEEEcCC
Confidence 9999999886 56667889999999999999999999999999999999997653 455554 468999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-------cccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-------HHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+.+|++++.+ .+++|++... ..+..+.. .+...+.+++|+|+|++|++|+.||.|++
T Consensus 249 ~~~la~~~~~-~i~v~~~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 249 RYWLAAATAT-GIKVFSLDPQ---------------YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp SSEEEEEETT-EEEEEEETTE---------------EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCEEEEEcCC-CcEEEEeCcC---------------eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 9999888755 5999998432 22333322 13567899999999999999999999999
Q ss_pred cccCCC
Q psy14815 310 FKENPE 315 (479)
Q Consensus 310 w~~~~~ 315 (479)
||+.+.
T Consensus 313 Wd~~t~ 318 (319)
T 3frx_A 313 WQVMTA 318 (319)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 998764
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-39 Score=311.52 Aligned_cols=316 Identities=18% Similarity=0.273 Sum_probs=252.4
Q ss_pred ccccc--cccceEEEEECCCCC-eEEEeeCCCcEEEEec----ccccc------cc--------------------cccC
Q psy14815 5 QTLKG--HQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM----VIREP------YE--------------------KLHG 51 (479)
Q Consensus 5 ~~l~~--h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~----~~~~~------~~--------------------~~~~ 51 (479)
+.+.. |.+.|++++|+|+++ +|++|+.||.|++||+ .+++. .. .+..
T Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 37 KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 34444 559999999999999 9999999999999999 77762 22 2222
Q ss_pred CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe
Q psy14815 52 LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE 131 (479)
Q Consensus 52 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~ 131 (479)
.+++..+++++.++.+++|+.. +. .......|...|.+++|+|++++|++++.|+.|++||+.+++ ....+.
T Consensus 117 s~~~~~l~~~~~dg~i~i~~~~--~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~ 188 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWNKT--GA----LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT--VMQHFE 188 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEETT--SC----EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE--EEEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEeCC--CC----eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc--EEEEee
Confidence 3567788899999999999943 21 222346799999999999999999999999999999999986 556666
Q ss_pred CCCCc---------------EEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE
Q psy14815 132 GHENE---------------VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 196 (479)
Q Consensus 132 ~~~~~---------------v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 196 (479)
.+... +.++.|++++ .+++++.+|.|++||++.. .....+..|...|.+++|+|++++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEK---TPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp CC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCS---SCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCC---ceeeeeccCCCceEEEEECCCCCEEEE
Confidence 66666 9999999875 5889999999999999987 455667789999999999999999999
Q ss_pred EEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEE
Q psy14815 197 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 276 (479)
Q Consensus 197 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 276 (479)
++.||.|++||++.+.. ...+..|...|.+++|+|++ ++++++.|+.|++||++. .+++.
T Consensus 265 ~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~---------------~~~~~ 324 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ---------------NTLLA 324 (425)
T ss_dssp EETTSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT---------------TEEEE
T ss_pred EcCCCEEEEEECCCCcc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC---------------CcEeE
Confidence 99999999999997654 56677899999999999999 999999999999999843 35677
Q ss_pred EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC-----------CceeeEEEecccccccc--ceeEEEe
Q psy14815 277 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFDLVHTEHRAHNQ--DVNCVAW 343 (479)
Q Consensus 277 ~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-----------~~~~~~~~~~~~~~h~~--~v~~~~~ 343 (479)
.+..| ..+|.+++|+|++++|++++.||.|++||+...+... ......++. ....|.. .|++++|
T Consensus 325 ~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 325 LSIVD-GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA-SYQSSQDNDYIFDLSW 402 (425)
T ss_dssp EEECT-TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEE-EECCTTCCCCEEEEEE
T ss_pred ecccC-CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh-hhcCcccCCceEEEEc
Confidence 77776 7799999999999999999999999999998654100 000011233 3356765 9999999
Q ss_pred cCCCCCCCccc
Q psy14815 344 NPVVPEPQKTN 354 (479)
Q Consensus 344 sp~~~~l~~~~ 354 (479)
+|++++|+.+.
T Consensus 403 s~~~~~l~~~~ 413 (425)
T 1r5m_A 403 NCAGNKISVAY 413 (425)
T ss_dssp CTTSSEEEEEE
T ss_pred cCCCceEEEEe
Confidence 99999886554
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-38 Score=297.34 Aligned_cols=308 Identities=13% Similarity=0.147 Sum_probs=254.0
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccc----------cccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR----------EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
|.++|.+++|+|||++++++..++.+.+|+.... ..+..+...+++..+++++ ++.+++|++.......
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 5678999999999999999887776666654332 2233333346666777777 9999999998654433
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
........+|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|+++++++++.||.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 33333344789999999999999999999999999999999987666778888999999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+||+++. +....+..|...+.+++|+|++++|++++.||.|++||+++++. ...+ .+...+.+++|+|++++
T Consensus 167 ~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 167 VWDLHNQ---TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----LQQH-DFTSQIFSLGYCPTGEW 238 (337)
T ss_dssp EEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EEEE-ECSSCEEEEEECTTSSE
T ss_pred EEeCCCC---ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce----Eeee-cCCCceEEEEECCCCCE
Confidence 9999987 56667788999999999999999999999999999999997653 3333 47788999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
+++++.|+.|++||+.... ...+..| ...|.+++|+|++++|++++.||.|++|++.+++
T Consensus 239 l~~~~~~~~i~~~~~~~~~----------------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--- 298 (337)
T 1gxr_A 239 LAVGMESSNVEVLHVNKPD----------------KYQLHLH-ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--- 298 (337)
T ss_dssp EEEEETTSCEEEEETTSSC----------------EEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---
T ss_pred EEEEcCCCcEEEEECCCCC----------------eEEEcCC-ccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---
Confidence 9999999999999985432 2345555 7899999999999999999999999999999887
Q ss_pred CceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.... ..|...|.+++|+|++++|+.+.
T Consensus 299 ------~~~~--~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 299 ------SIFQ--SKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp ------EEEE--EECSSCEEEEEECTTSCEEEEEE
T ss_pred ------EEEE--ecCCCcEEEEEECCCCCEEEEec
Confidence 2322 35788999999999999886553
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=300.57 Aligned_cols=282 Identities=18% Similarity=0.264 Sum_probs=241.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...+|.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--------------------------------- 70 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL--------------------------------- 70 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE---------------------------------
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh---------------------------------
Confidence 35678999999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----Cc
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KS 157 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~ 157 (479)
.+|...|.+++|+|++++|++++.||.|++||+.+++ ....+. +...+.+++|+|+++++++++.+ |.
T Consensus 71 ----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 71 ----DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ--CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred ----hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE
Confidence 4789999999999999999999999999999999987 445555 78899999999999999999999 99
Q ss_pred EEEEEeCCCCcee--------eeeeeecccc--ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 158 VWVWEVGEEDEYE--------CAAVINAHIQ--DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 158 i~vwd~~~~~~~~--------~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
|++||++...... ....+..|.. .+.+++|+|++++|++++.||.|++||+++.. .....+..|...
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~ 220 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKS 220 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSC
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCc
Confidence 9999998764211 2233445555 89999999999999999999999999998733 346778889999
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC--
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-- 305 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-- 305 (479)
|.+++|+|++++|++++.|+.|++||++.. +.+..+. +...+.+++|+|+++++++++.++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---------------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTL---------------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC--
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCC---------------ceeeeec--CCCCceeEEecCCCceEEEeecCCCc
Confidence 999999999999999999999999998543 3455555 267899999999999999999988
Q ss_pred ------------eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 ------------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+++||..+++ ......+|...|++++|+|++++|+.+.
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEE----------EIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp -----------CEEEEEETTTCC----------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEecCCCcceeEEEecCCCc----------chhheecccCcEEEEEECCCCCEEEEEc
Confidence 89999999887 3344468999999999999999986654
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.8e-40 Score=317.23 Aligned_cols=287 Identities=18% Similarity=0.243 Sum_probs=222.8
Q ss_pred cccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+...+|...|+||+|+| ++++||+|+.||+|+|||+.+++....+
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~--------------------------------- 158 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI--------------------------------- 158 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE---------------------------------
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE---------------------------------
Confidence 445668999999999999 5679999999999999998765532221
Q ss_pred EEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
...+|.+.|++++|+| ++.+|++|+.||+|++||++++..........+...+.+++|+|++++|++|+.||.|++|
T Consensus 159 --~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 159 --KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp --CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred --EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 1357999999999998 6899999999999999999887543333333445568899999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
|++.. .+..+..|...|++++|+|+++ ++++|+.|+.|++||+++.... ..+....+|...|++++|+|++++|
T Consensus 237 d~~~~----~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 237 NMDGK----ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp ESSSC----BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTSSEE
T ss_pred ccCcc----eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCCCee
Confidence 99763 4556788999999999999875 7889999999999999876532 1233446799999999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----cccEEEEEecCCCCeEEEEe------------C
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLIATAC------------G 303 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~l~~~~------------~ 303 (479)
++++.||.|++||+....... .+..|. ...+....|+|++.++++++ .
T Consensus 312 ~s~~~D~~i~iwd~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 376 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDCPL---------------GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYE 376 (435)
T ss_dssp EEEESSSCEEEEESSSSSSEE---------------EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTC
T ss_pred EEEcCCCEEEEEECCCCccce---------------EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecC
Confidence 999999999999987654321 221110 11122334555554444442 3
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEE-EecCCCCCCCccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPEPQKTN 354 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~~~~ 354 (479)
++.|++||..+++ ++..+..+|...|.++ +|||+|++|+.+.
T Consensus 377 ~~~i~iwd~~~g~---------~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 377 LRTIDVFDGNSGK---------MMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp CCCEEEECSSSCC---------EEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred CCEEEEEECCCCc---------EEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 4679999999987 5666667888999988 6999999997653
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.1e-39 Score=330.64 Aligned_cols=287 Identities=23% Similarity=0.335 Sum_probs=233.3
Q ss_pred ccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
....|++|++.|++++|+|++ ++|+||+.|++|++||+.+..... ..
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--------------------------------~~ 421 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--------------------------------GV 421 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--------------------------------CE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--------------------------------cc
Confidence 345789999999999999864 799999999999999986543211 01
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
......+|...|.+++|+|++++|++|+.||+|++||+.+++ ....+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 499 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 499 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 112236899999999999999999999999999999999986 667888999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC--CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
|+.............+|...|++++|+|++ ..+++++.|+.|++||+++.. ....+.+|.+.|++++|+|++++
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK----LRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSE
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEeCCCCE
Confidence 987653322223335788899999999986 689999999999999998765 36778899999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++|+.||.|++||++.. +++..+.. ...|.+++|+|++.++++++ |+.|++||+.++.
T Consensus 576 l~sg~~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~--- 634 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEG---------------KKLYSLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS--- 634 (694)
T ss_dssp EEEEETTSBCEEEETTTT---------------EEEECCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE---
T ss_pred EEEEeCCCeEEEEECCCC---------------ceEEEecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC---
Confidence 999999999999998543 44555544 45799999999998887665 6679999999875
Q ss_pred CceeeEEEeccc------------------cccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEH------------------RAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~------------------~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++..+. ..+...+++++|||+|++|++++
T Consensus 635 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 635 ------IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp ------EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE
T ss_pred ------ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 222111 01122478999999999997664
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=315.29 Aligned_cols=322 Identities=16% Similarity=0.270 Sum_probs=255.4
Q ss_pred cccceEEEEECCCCC-eEEEe----------eCCCcEEEEecccccc---ccccc---------CCCccceEEEeecCCc
Q psy14815 10 HQGRVWNVSWNPQGT-MISSC----------GEDKNIRLWVMVIREP---YEKLH---------GLPVETSLRQLVEDKN 66 (479)
Q Consensus 10 h~~~V~~l~~s~~~~-~l~t~----------~~dg~v~iwd~~~~~~---~~~~~---------~~~~~~~~~~~~~~~~ 66 (479)
+...|.+++|+|+++ +|++| +.|+.|++||+.+++. +..+. ..+++..+++++.++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 456899999999987 99999 8899999999987752 22221 2356778888899999
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCe------EE-EeEEEeCCCCcEE
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ------FE-CNATLEGHENEVK 138 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~------~~-~~~~~~~~~~~v~ 138 (479)
+++|++........ ......+|...|.+++|+|+ +.+|++++.|+.|++||+.+++ .. ....+..|...|.
T Consensus 91 v~vw~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 91 LELYSTNEANNAIN-SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp EEEECCSSTTSCCC-EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred EEEeeccccccccc-chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 99999985322211 23334689999999999998 8999999999999999998874 11 1223467889999
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc------ccceeEEEEecCC-CEEEEEEcCC---cEEEEe
Q psy14815 139 SVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------IQDVKKVRFHPFD-NILASASYDD---TVKLFK 207 (479)
Q Consensus 139 ~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~v~~l~~~~~~-~~l~~~~~dg---~i~i~d 207 (479)
+++|+|+ +.+|++++.||.|++||+++. .....+..+ ...+++++|+|++ .++++++.|+ .|++||
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAK---KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTT---EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCC---CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999998 789999999999999999987 444555554 7889999999987 6899999998 999999
Q ss_pred cCCcccceEeeeeec-CCCccEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 208 EDKAEADWINFATLK-SHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
+++... ....+. +|...|.+++|+| ++++|++++.|+.|++||++.. +++..+.+| ...
T Consensus 247 ~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---------------~~~~~~~~~-~~~ 307 (416)
T 2pm9_A 247 LRNANT---PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---------------EQLSQFPAR-GNW 307 (416)
T ss_dssp TTSTTS---CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC---------------CEEEEEECS-SSC
T ss_pred CCCCCC---CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC---------------ccceeecCC-CCc
Confidence 997642 355666 8999999999999 8999999999999999998443 557778886 789
Q ss_pred EEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCCCCcee------------eEEEe-------------cccccccccee
Q psy14815 286 IYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVS------------FDLVH-------------TEHRAHNQDVN 339 (479)
Q Consensus 286 i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~------------~~~~~-------------~~~~~h~~~v~ 339 (479)
|.+++|+|++ .+|++++.||.|++|++........... +.... .....|..+++
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSP 387 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSC
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCcc
Confidence 9999999998 8999999999999999987753221100 00000 11223677888
Q ss_pred EEEecCCCCCCCccc
Q psy14815 340 CVAWNPVVPEPQKTN 354 (479)
Q Consensus 340 ~~~~sp~~~~l~~~~ 354 (479)
+++|+|+|++|+.+.
T Consensus 388 ~~~~s~dg~~la~~~ 402 (416)
T 2pm9_A 388 AAHWAFGGKLVQITP 402 (416)
T ss_dssp CCEEETTTEEECBCT
T ss_pred ceEEeeCCeEEEEeC
Confidence 999999999998765
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.9e-39 Score=307.82 Aligned_cols=300 Identities=17% Similarity=0.175 Sum_probs=233.3
Q ss_pred ccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
..+++.+|.+.|++++|+|++ ++|++|+.||+|+|||+.+++....+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------------------------------- 112 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-------------------------------- 112 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE--------------------------------
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee--------------------------------
Confidence 456788999999999999999 99999999999999999766543322
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
...+|...|.+++|+| ++++|++++.|+.|++||+++...........|...|.+++|+|++++|++|+.||.|++
T Consensus 113 ---~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 113 ---QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLL 189 (383)
T ss_dssp ---CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred ---ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEE
Confidence 1246899999999999 789999999999999999997643333333344588999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc-CCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 238 (479)
||++. .....+..|...|.+++|+|+++ +|++++.|+.|++||+++.......+..+ .|...|.+++|+| +++
T Consensus 190 ~d~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 190 LGLDG----HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST 264 (383)
T ss_dssp EETTS----CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC
T ss_pred EECCC----CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC
Confidence 99953 45667888999999999999998 99999999999999999754322334444 6999999999999 999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCC--CceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDND--SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|++++.|+.|++||++.......+...... .....+. ..-+....+..++|+|++++ +++.||.|++||+.+++
T Consensus 265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred EEEEEcCCCcEEEEECCCCccccccccccccccccccceE-EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 9999999999999999776543221110000 0000000 01111345667888888887 88899999999999887
Q ss_pred CCCCceeeEEEecccc-ccccceeEEEecCCCCCCCccc
Q psy14815 317 GDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++..+.. .|...+..++|+|++++|+.++
T Consensus 342 ---------~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 342 ---------LVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp ---------EEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ---------eeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 3444321 2567788889999999987663
No 35
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-38 Score=305.96 Aligned_cols=286 Identities=17% Similarity=0.258 Sum_probs=236.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc------ccccccCC----------Cc----c---ceEE
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE------PYEKLHGL----------PV----E---TSLR 59 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~------~~~~~~~~----------~~----~---~~~~ 59 (479)
..+++++|.+.|++++|+| ++|++|+.||+|++||+.+++ ....+..+ +. + ..++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4677899999999999998 899999999999999999887 45544443 34 5 6788
Q ss_pred EeecCCcEEEecCCCCCCceeeeEEecccc-----CCcEEEEEEC----CCCCE-EEEEECCCeEEEEECCC------Ce
Q psy14815 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWS----PCGNF-IASASFDATTAVWDKRS------GQ 123 (479)
Q Consensus 60 ~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~----~~~~~-l~t~~~dg~i~iwd~~~------~~ 123 (479)
+++.++.+++|++................| ...|.+++|+ |++++ |++++.||.|++||+.+ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 889999999999986443222212333566 5999999999 99999 99999999999999987 43
Q ss_pred EEEeE-----EE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec---c---ccceeEE
Q psy14815 124 FECNA-----TL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA---H---IQDVKKV 185 (479)
Q Consensus 124 ~~~~~-----~~-------~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~---~~~v~~l 185 (479)
.+. .+ ..|...|.+++|+|++ ++++++.||.|++||+++. .....+.. | ...|.++
T Consensus 166 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 166 --TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL---RPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp --TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT---EEEEEEECCC---CCCCCEEEE
T ss_pred --eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC---ceeEEEeccccccccCCccceE
Confidence 222 44 4588899999999999 9999999999999999987 55666777 8 8999999
Q ss_pred EEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecC-------------CCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 186 RFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKS-------------HTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 186 ~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
+|+|++++|++++.| |.|++||+++++. +..+.. |...|.+++|+|++++|++++.||.|
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999999 9999999997653 566777 99999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEe------cc--------------ccccEEEEEecCCC----------CeEE
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GH--------------HGRTIYDISWCHLT----------DLIA 299 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------------~~~~i~~l~~~~~~----------~~l~ 299 (479)
++||+... +++..+. +| |..+|++++|+|++ ++|+
T Consensus 316 ~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 316 RFWDVKTK---------------ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp EEEETTTT---------------EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE
T ss_pred EEEEcCCC---------------ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE
Confidence 99998443 5566666 43 27799999999998 7999
Q ss_pred EEeCCCeEEEcccCCC
Q psy14815 300 TACGDDAIRIFKENPE 315 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~ 315 (479)
+++.||.|++|+++++
T Consensus 381 s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 381 CVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEETTTEEEEEEEEC-
T ss_pred EecCCCcEEEEEcCCC
Confidence 9999999999998775
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-38 Score=302.01 Aligned_cols=295 Identities=17% Similarity=0.193 Sum_probs=238.9
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+..|.++|++++|+|++++|++++.|+.|++||+.+++ .+..
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~----------------------------------- 47 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE----------------------------------- 47 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE-----------------------------------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeee-----------------------------------
Confidence 456699999999999999999999999999999987654 2222
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|.+++|+|++++|++++.||.|++||+++++......+..|...|.+++|+|++++|++++.||.|++||+
T Consensus 48 --~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~ 125 (372)
T 1k8k_C 48 --LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 125 (372)
T ss_dssp --EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEE
T ss_pred --ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEe
Confidence 247899999999999999999999999999999999876556666789999999999999999999999999999999
Q ss_pred CCCCceeeeee-eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--------------cceEeeeeecCCCccE
Q psy14815 164 GEEDEYECAAV-INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--------------ADWINFATLKSHTSTV 228 (479)
Q Consensus 164 ~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~~~~~v 228 (479)
+.......... ...|...|.+++|+|++++|++++.||.|++||++... .....+..+..|...|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 205 (372)
T 1k8k_C 126 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 205 (372)
T ss_dssp ETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE
T ss_pred cCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE
Confidence 98764333333 35678999999999999999999999999999975211 0123466777899999
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++|+|++++|++++.|+.|++||++.. +++..+..| ..+|.+++|+|++.+++++ .|+.|+
T Consensus 206 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 206 HGVCFSANGSRVAWVSHDSTVCLADADKK---------------MAVATLASE-TLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEEGGGT---------------TEEEEEECS-SCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCC---------------ceeEEEccC-CCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 99999999999999999999999998543 456777776 7799999999999988887 899999
Q ss_pred EcccCC--CCC----CCC-------------------ceeeEEE------eccccccccceeEEEec-CCC---CCCCcc
Q psy14815 309 IFKENP--EAG----DSD-------------------MVSFDLV------HTEHRAHNQDVNCVAWN-PVV---PEPQKT 353 (479)
Q Consensus 309 vw~~~~--~~~----~~~-------------------~~~~~~~------~~~~~~h~~~v~~~~~s-p~~---~~l~~~ 353 (479)
+|++.. ++- ..+ ....... ..+..+|..+|++++|+ ++| .+|+++
T Consensus 269 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~ 348 (372)
T 1k8k_C 269 LFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 348 (372)
T ss_dssp EEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEE
T ss_pred EEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEe
Confidence 999987 310 000 0000011 33335899999999976 666 788654
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 349 ~ 349 (372)
T 1k8k_C 349 G 349 (372)
T ss_dssp E
T ss_pred c
Confidence 3
No 37
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7e-38 Score=293.93 Aligned_cols=269 Identities=17% Similarity=0.271 Sum_probs=228.7
Q ss_pred cccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EE
Q psy14815 48 KLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FE 125 (479)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~ 125 (479)
.+...+++..+++++.|+++++||...... ......|...|.+++|+|++++|++|+.|+.|++|++.+++ ..
T Consensus 60 ~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTTNK-----VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCE-----EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCc-----ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 334456778899999999999999874321 12235788999999999999999999999999999998753 23
Q ss_pred EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEE
Q psy14815 126 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 205 (479)
Q Consensus 126 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i 205 (479)
....+.+|.+.|.++.|++++. +++++.|+.|++||++++ .....+.+|...|.+++|+|+++++++|+.|+.|++
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 5567889999999999998765 899999999999999987 566778899999999999999999999999999999
Q ss_pred EecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccc
Q psy14815 206 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGR 284 (479)
Q Consensus 206 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 284 (479)
||++++.. ...+.+|...|++++|+|++++|++|+.||+|++||++.. ..+..+... +..
T Consensus 211 wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~---------------~~~~~~~~~~~~~ 271 (340)
T 1got_B 211 WDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDNIIC 271 (340)
T ss_dssp EETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCS
T ss_pred EECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEccCCccc
Confidence 99997653 6778899999999999999999999999999999998543 334444322 235
Q ss_pred cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 285 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 285 ~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|.+++|+|++++|++|+.||.|++||+..++ ....+.+|..+|.+++|+|++.+|++++
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----------RAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC----------EEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCc----------EeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 79999999999999999999999999998876 3344568999999999999999997765
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-38 Score=294.16 Aligned_cols=265 Identities=25% Similarity=0.486 Sum_probs=202.8
Q ss_pred ccc-cc-cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 5 QTL-KG-HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 5 ~~l-~~-h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++ .+ |.+.|++++|+|++++|++|+.|++|+|||+....... .. ...
T Consensus 50 ~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~-----------------------------~~-~~~ 99 (330)
T 2hes_X 50 DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT-----------------------------FE-MDL 99 (330)
T ss_dssp EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------------------------CC-CEE
T ss_pred EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc-----------------------------cc-cee
Confidence 344 34 99999999999999999999999999999975322100 00 011
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC--eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....+|...|.+++|+|++++|++|+.|++|++||+... ....+..+.+|...|.+++|+|++.+|++|+.|+.|++
T Consensus 100 ~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~i 179 (330)
T 2hes_X 100 LAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI 179 (330)
T ss_dssp EEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 1223689999999999999999999999999999999532 23456788899999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCccc----ceEeeeeecC-CCccEEEEEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEA----DWINFATLKS-HTSTVWSLAF 233 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~-~~~~v~~~~~ 233 (479)
||..... ..++..+.+|...|.+++|+|+ +.+|++|+.|++|++||++.... .+.....+.. |...|.+++|
T Consensus 180 W~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 258 (330)
T 2hes_X 180 WKDYDDD-WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW 258 (330)
T ss_dssp EEEETTE-EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE
T ss_pred EECCCCC-eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE
Confidence 9987642 2466778899999999999998 67899999999999999975421 1233444554 8999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-eccccccEEEEEecC--CCCeEEEEeCCCeEEEc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 310 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~--~~~~l~~~~~dg~i~vw 310 (479)
++++ +|++++.||.|++||.... .++..... .+|....|.+++|+| ++++|++|+.||+|++|
T Consensus 259 s~~~-~l~s~~~dg~v~iw~~~~~-------------~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 259 GFNG-LIASVGADGVLAVYEEVDG-------------EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp CTTS-CEEEEETTSCEEEEEEETT-------------EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEE
T ss_pred cCCC-EEEEEeCCCEEEEEEcCCC-------------ceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEE
Confidence 9654 8999999999999997432 12233333 455333899999999 68899999999999999
Q ss_pred ccCC
Q psy14815 311 KENP 314 (479)
Q Consensus 311 ~~~~ 314 (479)
+++.
T Consensus 325 ~~~~ 328 (330)
T 2hes_X 325 SLEK 328 (330)
T ss_dssp EC--
T ss_pred Eecc
Confidence 9865
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=301.83 Aligned_cols=267 Identities=23% Similarity=0.390 Sum_probs=225.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++++|.+.|++++|+|++++|++|+.||.|+|||+..+.. ..
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-----------------------------------~~ 47 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----------------------------------KL 47 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----------------------------------EE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-----------------------------------ee
Confidence 5678999999999999999999999999999999999862211 11
Q ss_pred EEeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcE
Q psy14815 83 AILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSV 158 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i 158 (479)
.....+|...|++++|+++ +++|++++.||.|++||+.+++......+..|...|.+++|+|+ +.+|++++.||.|
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 1123579999999999987 89999999999999999999976677888899999999999999 9999999999999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEec-------------CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
++||++.... .....+..|...|++++|+| ++++|++++.||.|++||++...........+..|.
T Consensus 128 ~v~d~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 128 SVVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp EEEECCTTSC-CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEecCCCCc-eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 9999988743 23345678899999999999 699999999999999999988776566777888999
Q ss_pred ccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 226 STVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 226 ~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
..|.+++|+|+ +++|++++.||.|++||++...... ......... +...|.+++|+|++++|++++
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----------~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW----------KKTLLKEEK-FPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC----------EEEESSSSC-CSSCEEEEEECSSSCCEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc----------eeeeecccc-CCCcEEEEEEcCCCCEEEEec
Confidence 99999999999 8999999999999999997653211 011111222 377899999999999999999
Q ss_pred CCCeEEEcccCCCC
Q psy14815 303 GDDAIRIFKENPEA 316 (479)
Q Consensus 303 ~dg~i~vw~~~~~~ 316 (479)
.||.|++|++....
T Consensus 276 ~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 276 GDNKVTLWKENLEG 289 (379)
T ss_dssp SSSSEEEEEEEETT
T ss_pred CCCcEEEEeCCCCC
Confidence 99999999998643
No 40
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-38 Score=290.50 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=214.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++++|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~--------------------------------- 93 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF--------------------------------- 93 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE---------------------------------
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE---------------------------------
Confidence 45678899999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+|++++|++|+.|++|++||++++. .....+.+|...|.+++|+| ++..|++|+.||.|++|
T Consensus 94 ----~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 94 ----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp ----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred ----eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 5789999999999999999999999999999998774 24567889999999999999 67899999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
|++.... .......|...+..+.|+| ++++|++|+.|++|++||++++. ++..+.+|...|.+++|+|++++
T Consensus 169 d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 169 SLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS----CVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp ETTCSSC--SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSE
T ss_pred ECCCCCc--cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc----cceeeCCCCCCEEEEEECCCCCE
Confidence 9987642 2223345667899999987 67899999999999999999765 47888999999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENP 314 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~ 314 (479)
|++|+.||+|++||+.. +++..++..+ ...+.+++|+|++. ++++|+.| .+.+|++..
T Consensus 243 l~s~s~Dg~i~iWd~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSST---------------YKVEKTLNVG-LERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEEEETTSCEEEEETTT---------------CCEEEEECCS-SSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred EEEEcCCCeEEEEECCC---------------CceeeeccCC-CccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 99999999999999843 3567788776 77899999999875 57776654 566887654
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.7e-37 Score=293.74 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=217.9
Q ss_pred ccceEEEEECCCCCeEEEeeCCC-------cEEEEecccccccc----------cccCCC--------ccceEEE-----
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDK-------NIRLWVMVIREPYE----------KLHGLP--------VETSLRQ----- 60 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg-------~v~iwd~~~~~~~~----------~~~~~~--------~~~~~~~----- 60 (479)
.-+|+|++|+||+++|++||.|. .|++|++..+.... .+..+. ....+++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 35899999999999999997543 59999987554321 122221 1222222
Q ss_pred ------eecCCcEEEecCCCCCCceeeeEEe----ccccCCcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeE
Q psy14815 61 ------LVEDKNIRLWGKESFGNKFTAKAIL----SDGHQRTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 61 ------~~~~~~i~~w~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~ 128 (479)
+..++.+++|++............. ...+...+.+++|+|||+++++++ .|++|+|||+++++ .+.
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~--~~~ 171 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT--EKF 171 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE--EEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc--EEE
Confidence 2346789999887544433222211 123456689999999999987654 68999999999987 455
Q ss_pred EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC----cEE
Q psy14815 129 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVK 204 (479)
Q Consensus 129 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~ 204 (479)
.+. |...|.+++|+|+|+++++++. +.+++|+..++.. ........|...|++++|+|+++++++++.|+ .++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSC-IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCE-EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcc-eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 555 7788999999999999999985 4566777766532 22234567888999999999999999999887 588
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-ecccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHG 283 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 283 (479)
+|++............+.+|...|++++|+|+|++|++|+.|++|+|||+. +++++.++ .+| .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~---------------~~~~~~~~~~gH-~ 312 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK---------------DLSMSKIFKQAH-S 312 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT---------------TTEEEEEETTSS-S
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC---------------CCcEEEEecCcc-c
Confidence 899876654444556778899999999999999999999999999999984 34667775 555 8
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+|++++|+|||++|++||.|++|+||++....
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 899999999999999999999999999997543
No 42
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.4e-38 Score=295.13 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=206.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+++.+|...|++++|+|++.+|++|+.|++|++||+.+++.+..+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~---------------------------------- 114 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF---------------------------------- 114 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE----------------------------------
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE----------------------------------
Confidence 4678999999999999999999999999999999999877654433
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC----------CEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG----------QFLATCS 153 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~----------~~l~~~~ 153 (479)
.+|...|.+++|+|++++|++++.|++|++||+.............|...|.+++|+|++ .+|++++
T Consensus 115 ---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 115 ---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp ---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred ---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 578999999999999999999999999999999854322112223688899999999986 7899999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.||.|++||... .....+..|...|++++|+|++++|++|+.||.|++||+..... ....+ .+...|.+++|
T Consensus 192 ~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~---~~~~~-~~~~~v~~v~~ 263 (343)
T 2xzm_R 192 WDGRLKVWNTNF----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY---PQREF-DAGSTINQIAF 263 (343)
T ss_dssp TTSEEEEEETTT----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS---CSEEE-ECSSCEEEEEE
T ss_pred CCCEEEEEcCCC----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc---cceee-cCCCcEEEEEE
Confidence 999999999432 45567889999999999999999999999999999999954332 12222 24567999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCC--CCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSA--GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+|++.+++++ .|+.|++||+....... .+... ... ......+| ...|.+++|+|++++|++|+.||.|++|+
T Consensus 264 sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~-~~~---~~~~~~~~-~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 264 NPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE-PIT---KAEGQKGK-NPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp CSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC-SGG---GBTTBCCS-CCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred CCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC-cch---hhhhhcCC-CCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 9999877655 57889999986654321 10000 000 00011233 67899999999999999999999999999
Q ss_pred cCCC
Q psy14815 312 ENPE 315 (479)
Q Consensus 312 ~~~~ 315 (479)
+.++
T Consensus 338 ~~~g 341 (343)
T 2xzm_R 338 FETS 341 (343)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 8764
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-37 Score=297.40 Aligned_cols=248 Identities=28% Similarity=0.402 Sum_probs=207.1
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..|++++|+|+|++|++|+.|++|++||+.+++.+..+ .+|..
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------------------------~~h~~ 166 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL-------------------------------------QGHEQ 166 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------------------------CCCSS
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-------------------------------------ccCCC
Confidence 35999999999999999999999999998776544332 57899
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
.|.+++|+|++++|++++.|++|++||+++++ ....+. +...+.+++|+| ++++|++|+.||.|++||++++....
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 99999999999999999999999999999986 344444 567899999999 89999999999999999998874322
Q ss_pred ee----eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--------ceEeeeeecCCCccEEEEEEccCCC
Q psy14815 171 CA----AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--------DWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 171 ~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.. ....+|...|.+++|+|++++|++|+.|+.|++||++.... ...+...+.+|...|.+++|+|+++
T Consensus 244 ~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 323 (393)
T 1erj_A 244 RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 323 (393)
T ss_dssp EEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC
T ss_pred eecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC
Confidence 22 11257889999999999999999999999999999986432 1123456778999999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC------CCCeEEEEeCCCeEEEccc
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH------LTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~------~~~~l~~~~~dg~i~vw~~ 312 (479)
+|++|+.|+.|++||...+ +++..+.+| ...|.+++|++ ++.+|++|+.||+|++|++
T Consensus 324 ~l~sgs~D~~v~iwd~~~~---------------~~~~~l~~h-~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 324 YILSGSKDRGVLFWDKKSG---------------NPLLMLQGH-RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCC---------------eEEEEECCC-CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999999999998433 557788887 78999999886 6789999999999999998
Q ss_pred CCC
Q psy14815 313 NPE 315 (479)
Q Consensus 313 ~~~ 315 (479)
...
T Consensus 388 ~~~ 390 (393)
T 1erj_A 388 KKI 390 (393)
T ss_dssp EEC
T ss_pred ccc
Confidence 654
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-38 Score=300.28 Aligned_cols=305 Identities=12% Similarity=0.187 Sum_probs=239.9
Q ss_pred cccccccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 6 TLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+.+|.+.|++++|+|+ ...+++++.++.|++||+.+++.+..+.
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~------------------------------- 61 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ------------------------------- 61 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEE-------------------------------
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeee-------------------------------
Confidence 34589999999999984 4566666667799999998776654431
Q ss_pred eEEeccccCCcEEEEEECCC----CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy14815 82 KAILSDGHQRTIRETAWSPC----GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDK 156 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg 156 (479)
......|...|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.||
T Consensus 62 -~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg 138 (366)
T 3k26_A 62 -SYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDH 138 (366)
T ss_dssp -EEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred -eccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 1112347789999999998 6799999999999999999886 5677889999999999999 999999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce---------------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW--------------------- 215 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------- 215 (479)
.|++||+++++.......+..|...|.+++|+|++++|++++.||.|++||++++....
T Consensus 139 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 99999999874332222236899999999999999999999999999999998654210
Q ss_pred ---EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 216 ---INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 216 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
........|...|.+++|+ ++++++++.|+.|++||+........... ........+..+..| ...|++++|+
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~v~~~~~s 294 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIK-PSESNVTILGRFDYS-QCDIWYMRFS 294 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCC-TTCCCEEEEEEEECS-SCCSSCCCCE
T ss_pred eccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccc-cCCcchheecccccc-CCcEEEEEEc
Confidence 0122334499999999999 77999999999999999977654322211 122334667788887 7789999999
Q ss_pred CC--CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc--ccceeEEEecCCCCCCCccc
Q psy14815 293 HL--TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH--NQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 293 ~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+ +++|++++.||.|++||+..++... .... .+.+| ...|++++|+|++++|+.+.
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVEDPHK-----AKCT-TLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSSSGGG-----CEEE-EECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCcEEEEEecCCcEEEEECCCCCCcc-----ccce-EEcccccCCceEEEEeCCCCCeEEEEe
Confidence 99 9999999999999999999875110 0111 22345 79999999999999987654
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-38 Score=299.20 Aligned_cols=304 Identities=15% Similarity=0.193 Sum_probs=215.1
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEecccccc------cccccCCCccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 16 NVSWNPQGTMISSCGEDKNIRLWVMVIREP------YEKLHGLPVETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.+.+++.++.+. .+.....|++....+ +..+...|++..+++++. |+.+++|+.......... .
T Consensus 10 g~d~g~~~~~~~~~-g~~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-~ 87 (357)
T 4g56_B 10 GVDLGTENLYFQSN-GSSKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-C 87 (357)
T ss_dssp -------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG-C
T ss_pred CCCCCccceEEecC-CCccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE-e
Confidence 35556666555444 466789999865433 445556788899999887 677899987653322111 1
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe--EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN--ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
....+|...|.+++|+|++. +++++.||+|++||+.+++.... ....+|...|.+++|+|++++|++|+.||.|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 12246889999999999975 56678899999999988763322 3455799999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 239 (479)
|++++ +....+..|...|++++|+|++ .++++++.||.|++||+++++. ........|...+.+++|+|++ .+
T Consensus 167 d~~~~---~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 167 DLSQK---AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp ETTTT---EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred ECCCC---cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccce
Confidence 99987 6677888999999999999987 4789999999999999997764 2223445677889999999975 67
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
|++|+.|+.|++||++.. +++..+.+| ...|++++|+|++ ++|++|+.|++|+|||+++++
T Consensus 242 la~g~~d~~i~~wd~~~~---------------~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~-- 303 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNP---------------DSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE-- 303 (357)
T ss_dssp EEEEESSSCEEEEESSCG---------------GGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE--
T ss_pred EEEeecccceeEEECCCC---------------cEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc--
Confidence 889999999999998544 335667776 7899999999987 589999999999999999876
Q ss_pred CCceeeEEEeccccccccceeEEEecC-CCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~ 354 (479)
++.. .+|.+.|++++||| ++.+|++++
T Consensus 304 -------~~~~--~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 304 -------VFRD--LSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp -------EEEE--CCCSSCEEEEEECSSSTTEEEEEE
T ss_pred -------EeEE--CCCCCCEEEEEEeCCCCCEEEEEc
Confidence 3433 37999999999999 788886654
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.4e-38 Score=327.91 Aligned_cols=278 Identities=19% Similarity=0.282 Sum_probs=244.6
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|...++|++|.+.|++++|+|++++|++++.||.|+|||+.+++.+..+
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~------------------------------- 51 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI------------------------------- 51 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------------------
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE-------------------------------
Confidence 4567899999999999999999999999999999999999877655443
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+|..+|.+++|+|++++|++++.||.|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++
T Consensus 52 ------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 52 ------QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp ------ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ------ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 4688999999999999999999999999999999986 66778899999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeec-CCCccEEEEEEcc--C
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR--I 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~ 236 (479)
||+++.. .....+..|...|.+++|+| +++.|++++.||.|++||++.+.. ...+. .+...+.+++|+| +
T Consensus 124 w~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 124 WNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEGGGTS--EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC----SEEEECCCTTCCCEEEECCSTT
T ss_pred EECCCCc--eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc----eeEEecCCCCCEEEEEEEECCC
Confidence 9998763 45567788999999999999 889999999999999999987664 23333 3458899999999 9
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.+|++++.||.|++||+.. ..++..+.+| ...|.+++|+|+++++++++.||.|++||+.+++
T Consensus 198 ~~~l~~~~~dg~i~~~d~~~---------------~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 198 KPYMITASDDLTIKIWDYQT---------------KSCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CCEEEEECTTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCEEEEEeCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999843 3567778876 7899999999999999999999999999999887
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
.......|...+.+++|+|+++.
T Consensus 262 ----------~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 262 ----------VEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp ----------EEEEECCSSSSEEEEEECTTCGG
T ss_pred ----------EEEEeecCCCcEEEEEEccCCCc
Confidence 33444678889999999999974
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.7e-39 Score=305.97 Aligned_cols=261 Identities=18% Similarity=0.244 Sum_probs=209.4
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc--cccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR--EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
.....++.|.++|++++|+|++++|++|+.||.|++||+.++ +.+..+
T Consensus 2 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~------------------------------ 51 (377)
T 3dwl_C 2 ATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF------------------------------ 51 (377)
T ss_dssp CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB------------------------------
T ss_pred CcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE------------------------------
Confidence 344556678899999999999999999999999999998766 333322
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
.+|...|.+++|+|++++|++++.|+.|++||+.+++ ......+..|...|.+++|+|++++|++++.|+.|
T Consensus 52 -------~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (377)
T 3dwl_C 52 -------SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI 124 (377)
T ss_dssp -------CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE
T ss_pred -------ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE
Confidence 5789999999999999999999999999999999875 34566778899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--------------cceEeeeeecC
Q psy14815 159 WVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--------------ADWINFATLKS 223 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~ 223 (479)
++||++..+.......+.. |...|++++|+|++++|++++.|+.|++||++... .....+..+ .
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 9999998754445666777 99999999999999999999999999999986322 112345555 8
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
|...|.+++|+|++++|++++.||.|++||+...... ...+..+.+| ..+|.+++|+|++++|++++.
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP-----------PRALITVKLS-QLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC-----------EEECCCEECS-SSCEEEEEEEETTEEEEEESS
T ss_pred CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc-----------ceeeEeecCC-CCceEEEEEcCCCCEEEEEcC
Confidence 9999999999999999999999999999999765431 1224566676 789999999999999999987
Q ss_pred CCeEEEcccC
Q psy14815 304 DDAIRIFKEN 313 (479)
Q Consensus 304 dg~i~vw~~~ 313 (479)
++.+ +|+..
T Consensus 272 ~~~~-~~~~~ 280 (377)
T 3dwl_C 272 YSPI-LLQGN 280 (377)
T ss_dssp SSEE-EECCC
T ss_pred CcEE-EEEeC
Confidence 7666 66554
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-36 Score=283.87 Aligned_cols=274 Identities=18% Similarity=0.233 Sum_probs=232.0
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---------------cCCCccceEEEeecCCcEEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---------------HGLPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~w~ 71 (479)
..+|.+.|++++|+|++++|++++ ||.|++||+.+++....+ ...+++..+++++.++.+++|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 347999999999999999999999 999999999876543322 2235667788889999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
++.... ........|...|.+++|+|+++++++++.||.|++||+++++ ....+..|...+.+++|+|++++|++
T Consensus 126 ~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 126 LAAPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp CCCC-----EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCCc---ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--eeeeeecccCceEEEEECCCCCEEEE
Confidence 985331 1222346788999999999999999999999999999999986 66788889999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
++.||.|++||+++.+ ....+ .+...+.+++|+|+++++++++.++.|++||+++.. ...+..|...|.++
T Consensus 201 ~~~dg~i~~~d~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGR---QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----KYQLHLHESCVLSL 271 (337)
T ss_dssp EETTSEEEEEETTTTE---EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----EEEECCCSSCEEEE
T ss_pred EecCCcEEEEECCCCc---eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----eEEEcCCccceeEE
Confidence 9999999999999873 33333 467789999999999999999999999999999765 34567899999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+|+|++++|++++.||.|++||+.... .+... . +...|.+++|+|++++|++++.||.|++|+
T Consensus 272 ~~~~~~~~l~~~~~dg~i~~~~~~~~~---------------~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 272 KFAYCGKWFVSTGKDNLLNAWRTPYGA---------------SIFQS-K-ESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCC---------------EEEEE-E-CSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEecCCCcEEEEECCCCe---------------EEEEe-c-CCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 999999999999999999999985432 22222 2 377899999999999999999999999998
Q ss_pred c
Q psy14815 312 E 312 (479)
Q Consensus 312 ~ 312 (479)
+
T Consensus 335 ~ 335 (337)
T 1gxr_A 335 V 335 (337)
T ss_dssp E
T ss_pred E
Confidence 6
No 49
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-37 Score=284.04 Aligned_cols=278 Identities=21% Similarity=0.272 Sum_probs=235.8
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~ 71 (479)
.+.++|++|.+.|++++| |++++|++|+.||.|++||+.+++....+.. .+.+..+++++.++.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 467889999999999999 9999999999999999999988766554443 35677889999999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 150 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~ 150 (479)
+......... ....+|...|.+++| +++++++++.||.|++|| .++ ....+..|...+.++.|+| +++.++
T Consensus 88 ~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 88 LFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp TTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred eeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc--EEEecccCCCceeEEEEccCCCCEEE
Confidence 8854322222 223689999999999 578999999999999999 443 5677888999999999998 899999
Q ss_pred EEeCCCcEEEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 151 TCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+++.||.|++||.. .....+.. |...+.+++|+|++. +++++.||.|++||+++++. +..+..|...|+
T Consensus 160 ~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~ 229 (313)
T 3odt_A 160 TASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV----LRTYEGHESFVY 229 (313)
T ss_dssp EEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE----EEEEECCSSCEE
T ss_pred EEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh----hhhhhcCCceEE
Confidence 99999999999933 33445555 889999999999988 99999999999999997653 677888999999
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+++|+|++ .|++++.||.|++||+... +++..+..| ..+|.+++|+|+++ +++++.||.|++
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~---------------~~~~~~~~~-~~~i~~~~~~~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENG---------------SLKQVITLP-AISIWSVDCMSNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTC---------------CEEEEEECS-SSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCC---------------ceeEEEecc-CceEEEEEEccCCC-EEEEeCCCcEEE
Confidence 99999999 6889999999999998543 456777776 77999999999998 567899999999
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
|++..++
T Consensus 292 w~~~~~~ 298 (313)
T 3odt_A 292 FSQEKSR 298 (313)
T ss_dssp EESCGGG
T ss_pred EeCCCCc
Confidence 9999876
No 50
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.7e-37 Score=288.10 Aligned_cols=277 Identities=19% Similarity=0.289 Sum_probs=224.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.+++|.+.|++++|+|++++|++|+.||+|++||+.++..... ..
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~---------------------------------~~ 50 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE---------------------------------LS 50 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE---------------------------------EE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce---------------------------------ec
Confidence 466789999999999999999999999999999999875432111 11
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeE-------EEeEEEeCCCCcEEEEEEcCC--CCEEEEE
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQF-------ECNATLEGHENEVKSVTWSKN--GQFLATC 152 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~l~~~~~--~~~l~~~ 152 (479)
....+|...|++++|+| ++++|++++.||.|++||+++++. .....+..|...|.+++|+|+ +++|+++
T Consensus 51 ~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 51 DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred ceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe
Confidence 12357999999999999 699999999999999999987632 357788899999999999999 9999999
Q ss_pred eCCCcEEEEEeCCCCceeeee----------eeeccccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeee
Q psy14815 153 SRDKSVWVWEVGEEDEYECAA----------VINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 219 (479)
+.||.|++||+++.+...... ....|...+.+++|+|+ +..+++++.++.+.+|+...+.. ....
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 208 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL--HVAA 208 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE--EEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce--eeee
Confidence 999999999998875322211 11257778999999997 89999999999998888776543 4567
Q ss_pred eecCCCccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCCCCCC------------------------------
Q psy14815 220 TLKSHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSAGIPT------------------------------ 265 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------------ 265 (479)
.+.+|...|++++|+|++ ++|++++.||.|++||++..........
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 788899999999999998 8999999999999999986532211100
Q ss_pred -CCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 266 -PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 266 -~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
........++..+.+| ...|++++|+|++++|++++.||.|++|++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDH-NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --CCSEEEEEEEEECTT-SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred eecccccccEEEEEecc-cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 0011234667778886 7899999999999999999999999999999875
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-36 Score=307.67 Aligned_cols=315 Identities=15% Similarity=0.165 Sum_probs=249.5
Q ss_pred cccccccccccc-eEEEEECC--CCCeEEEeeCCCcEEEEecccc--------cccccccC----------CCccceEEE
Q psy14815 2 INSQTLKGHQGR-VWNVSWNP--QGTMISSCGEDKNIRLWVMVIR--------EPYEKLHG----------LPVETSLRQ 60 (479)
Q Consensus 2 ~~~~~l~~h~~~-V~~l~~s~--~~~~l~t~~~dg~v~iwd~~~~--------~~~~~~~~----------~~~~~~~~~ 60 (479)
.+.+.+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ .....+.. .+++..+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 456788999999 99999999 9999999999999999999754 34434332 355667777
Q ss_pred eecC----CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCC
Q psy14815 61 LVED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHEN 135 (479)
Q Consensus 61 ~~~~----~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 135 (479)
++.+ +.+.+|+... ......+|...|.+++|+|+++ .+++++.|+.|++||+.+++ ....+..|..
T Consensus 134 ~~~~~~~~~~v~~~d~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~ 204 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGN-------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHK 204 (615)
T ss_dssp EECCSSCSEEEEETTTCC-------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSC
T ss_pred eccCCCCccEEEEEECCC-------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCC
Confidence 7766 6899998431 2233468999999999999997 89999999999999999886 6678888998
Q ss_pred ---cEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeeeee-e---ccccceeEEEEecCCCEEEEEEcCCcEEEEe
Q psy14815 136 ---EVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVI-N---AHIQDVKKVRFHPFDNILASASYDDTVKLFK 207 (479)
Q Consensus 136 ---~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d 207 (479)
.|.+++|+|+ +++|++++.||.|++||++++ +....+ . .|...|.+++|+ ++++|++++.||.|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd 280 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWD 280 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC---CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEE
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC---CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEE
Confidence 9999999999 999999999999999999887 444555 4 789999999999 999999999999999999
Q ss_pred cCCcccc-----------------------------------------eEee----------------------------
Q psy14815 208 EDKAEAD-----------------------------------------WINF---------------------------- 218 (479)
Q Consensus 208 ~~~~~~~-----------------------------------------~~~~---------------------------- 218 (479)
+++++.. ...+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~ 360 (615)
T 1pgu_A 281 VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIM 360 (615)
T ss_dssp TTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEE
T ss_pred CCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEE
Confidence 8743210 0000
Q ss_pred --------------------------------------------------------------------------------
Q psy14815 219 -------------------------------------------------------------------------------- 218 (479)
Q Consensus 219 -------------------------------------------------------------------------------- 218 (479)
T Consensus 361 ~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (615)
T 1pgu_A 361 EWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 440 (615)
T ss_dssp ETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCcee
Confidence
Q ss_pred -----------------------------------------eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 219 -----------------------------------------ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 219 -----------------------------------------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
..+..|...|++++|+|++++|++++.||.|++||+.
T Consensus 441 ~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~-- 518 (615)
T 1pgu_A 441 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ-- 518 (615)
T ss_dssp EEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--
T ss_pred eecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCC--
Confidence 1122355566666666666666666666667777663
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC----------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~----------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
..+++..+.+.|...|++++|+| ++++|++++.||.|++||+..+. ..
T Consensus 519 -------------~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~ 576 (615)
T 1pgu_A 519 -------------SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM---------KI 576 (615)
T ss_dssp -------------TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT---------CC
T ss_pred -------------CCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc---------ee
Confidence 23556666662488999999999 99999999999999999999873 13
Q ss_pred eccccccccceeEEEecCCCCCCCccc
Q psy14815 328 HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 328 ~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
...+.+|...|++++|+|+++ |+.++
T Consensus 577 ~~~~~~h~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 577 IKALNAHKDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp EEETTSSTTCEEEEEEEETTE-EEEEE
T ss_pred chhhhcCccceEEEEEcCCCC-eEEec
Confidence 334578999999999999999 76553
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.1e-37 Score=288.10 Aligned_cols=270 Identities=16% Similarity=0.190 Sum_probs=227.2
Q ss_pred cccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe----
Q psy14815 48 KLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---- 123 (479)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~---- 123 (479)
.+...+++..+++++.|+++++||....... .....|...|.+++|+|++.++++|+.|+.+++|++....
T Consensus 69 ~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~-----~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 69 CMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE-----HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEE-----EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCCcc-----eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 3444567788999999999999998743221 1224678899999999999999999999999999986431
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec--CCCEEEEEEcCC
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDD 201 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg 201 (479)
......+..|...|.++.|+|++..|++++.||+|++||++++ +.+..+.+|...|.+++|+| ++++|++|+.||
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 1234566789999999999999999999999999999999987 56677889999999999988 468999999999
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
.|++||++++.. +..+..|...|++++|+|++++|++++.|++|++||++.. ..+..+..+
T Consensus 221 ~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~~ 281 (354)
T 2pbi_B 221 KAMVWDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD---------------REVAIYSKE 281 (354)
T ss_dssp CEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCT
T ss_pred eEEEEECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcCC
Confidence 999999997653 6778899999999999999999999999999999998543 333444332
Q ss_pred -ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 282 -HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 282 -~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
....+.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|++++|+|++++|++++
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS----------RVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----------EEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc----------eEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 24578999999999999999999999999998877 3334468999999999999999998765
No 53
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=288.21 Aligned_cols=303 Identities=15% Similarity=0.172 Sum_probs=235.7
Q ss_pred cccccccccceEEEEECCCCCeE-EEeeC---CCcEEEEeccccccccc-----------ccCCCc---cceEEEeecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMI-SSCGE---DKNIRLWVMVIREPYEK-----------LHGLPV---ETSLRQLVEDK 65 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l-~t~~~---dg~v~iwd~~~~~~~~~-----------~~~~~~---~~~~~~~~~~~ 65 (479)
.+.+++|.+.|++++|+|+++.+ ++|+. ||.|++||+.+++.... +...+. +..+++++.++
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 34567899999999999999655 56665 99999999988765322 222344 57889999999
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEE------ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC----
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETA------WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN---- 135 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~------~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~---- 135 (479)
.+++|++...... .....+|...|.+++ |+|++++|++++.||.|++||+++++ .....+..|.+
T Consensus 91 ~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 91 NLHIWNLEAPEMP----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD-DPVANMEPVQGENKR 165 (357)
T ss_dssp CEEEECTTSCSSC----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS-SCSEEECCCTTSCCC
T ss_pred eEEEEeCCCCCcc----EEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC-CcceeccccCCCCCC
Confidence 9999999854311 122358999999995 57899999999999999999999875 13455655544
Q ss_pred cEEEEE----EcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec---CCCEEEEEEcCCcEEEEec
Q psy14815 136 EVKSVT----WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKE 208 (479)
Q Consensus 136 ~v~~l~----~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~i~d~ 208 (479)
.+.++. |+|+++++++++.||.|++||+++.+ . .....|...|.+++|+| ++++|++++.||.|++||+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA---L-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE---E-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc---e-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 899998 67899999999999999999999873 2 33466788999999999 8999999999999999999
Q ss_pred CCcccceE-eeeeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCC----CCCCceEEEEEEeccc
Q psy14815 209 DKAEADWI-NFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTP----DNDSVWKCVCTLSGHH 282 (479)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 282 (479)
++...... ....+..|...|++++|+|+++ +|++++.||.|++||++........... .......++..+.+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 320 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS- 320 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC-
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC-
Confidence 86553211 1123448999999999999998 8999999999999999876544322111 111244678888887
Q ss_pred cccEEEEEecCCCCeEE-EEeCCCeEEEcccCCCC
Q psy14815 283 GRTIYDISWCHLTDLIA-TACGDDAIRIFKENPEA 316 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~-~~~~dg~i~vw~~~~~~ 316 (479)
..+|++++|+|++++|+ +++.||.|++|++...+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 88999999999999998 89999999999998754
No 54
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.9e-36 Score=293.82 Aligned_cols=302 Identities=23% Similarity=0.368 Sum_probs=253.9
Q ss_pred ccccccccccce-EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc--------cceEEEeecCCcEEEecCC
Q psy14815 3 NSQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 3 ~~~~l~~h~~~V-~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~w~~~ 73 (479)
..+.|++|.+.| +|+. +++++|++|+.||+|++||+.+++.+..+..+.. +..+++++.|+.+++||+.
T Consensus 110 ~~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CCEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred eeEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECC
Confidence 456789999875 5554 4689999999999999999999998888876643 4578888999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 153 (479)
... ......+|...|.+++|+ ++.+++|+.||.|++||+.+++ ....+.+|...|.++.| +++++++|+
T Consensus 188 ~~~-----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 188 TGE-----CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp TTE-----EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred cCc-----EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 421 122346899999999995 5789999999999999999986 66788899999999999 688999999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.||.|++||+++. .....+..|...|.+++| +++++++++.||.|++||+++++. +..+.+|...+.++.+
T Consensus 257 ~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 257 YDFMVKVWDPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMEL 327 (445)
T ss_dssp TTSCEEEEEGGGT---EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEE
T ss_pred CCCEEEEEECCCC---cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEE
Confidence 9999999999987 667778889999999999 689999999999999999997664 6778899999998887
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+ ++++++++.||.|++||++.. +++..+.++ +..+|.+++|+ +++|++|+.||.|++||
T Consensus 328 ~--~~~l~~~~~dg~i~vwd~~~~---------------~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 328 K--DNILVSGNADSTVKIWDIKTG---------------QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp E--TTEEEEEETTSCEEEEETTTC---------------CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred e--CCEEEEEeCCCeEEEEECCCC---------------cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 5 679999999999999998543 446666652 47789999995 57999999999999999
Q ss_pred cCCCCCCCCceeeEEEecc----ccccccceeEEEecCCCCCCCccc
Q psy14815 312 ENPEAGDSDMVSFDLVHTE----HRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.+++ .+..+ ..+|.+.|++++|+|++.+++.+.
T Consensus 389 ~~~~~---------~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 389 LKTGE---------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp TTTCC---------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred CCCCc---------eeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 99887 33322 247889999999999999887765
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-36 Score=280.89 Aligned_cols=250 Identities=24% Similarity=0.489 Sum_probs=212.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--------------------------------- 103 (312)
T 4ery_A 57 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL--------------------------------- 103 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---------------------------------
T ss_pred cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE---------------------------------
Confidence 35678899999999999999999999999999999999876654333
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|.+++|+|++++|++|+.|+.|++||+++++ ....+..|..+|.+++|+|++++|++++.||.|++||
T Consensus 104 ----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 104 ----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp ----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 4688999999999999999999999999999999886 5678889999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE---EEEEccCCCE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW---SLAFDRIGSR 239 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~ 239 (479)
+++.+.. ......+..++.+++|+|++++|++++.||.|++||+++++. +..+.+|..... .....+++.+
T Consensus 178 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 178 TASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC----LKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp TTTCCEE--EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE----EEEECSSCCSSSCCCEEEECSSSCE
T ss_pred CCCCcee--eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE----EEEEEecCCceEEEEEEEEeCCCcE
Confidence 9987422 222345667899999999999999999999999999987653 566666665432 2233467889
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKEN 313 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~ 313 (479)
|++|+.||.|++||+... +.+..+.+| ...|.+++|+|+++++++++ .|+.|++|+.+
T Consensus 252 l~sg~~dg~i~vwd~~~~---------------~~~~~~~~h-~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTK---------------EIVQKLQGH-TDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECCTTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEECCCCEEEEEECCCc---------------hhhhhhhcc-CCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999998443 457788887 78999999999999999987 69999999864
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-36 Score=296.10 Aligned_cols=296 Identities=21% Similarity=0.333 Sum_probs=248.6
Q ss_pred cccccccccce-EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC---------ccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP---------VETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V-~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~w~~~ 73 (479)
..+|++|.+.| +++.+ ++++|++|+.||+|++||+.+++.+..+..+. .+..+++++.|+++++||++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETT
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECC
Confidence 46789999885 66666 57799999999999999999998888777652 23378899999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEEC--CCCCEEEEEECCCeEEEEECCCCeEE---------------------EeEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDATTAVWDKRSGQFE---------------------CNATL 130 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~l~t~~~dg~i~iwd~~~~~~~---------------------~~~~~ 130 (479)
... ......+|...|.+++|+ +++.++++|+.||.|++||+.+++.. ....+
T Consensus 192 ~~~-----~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 192 KGC-----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp TTE-----EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred CCc-----EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 422 222346899999999998 57899999999999999999876422 14567
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 131 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 131 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
.+|...+.++ +++++++++|+.||.|++||+++. ..+..+.+|...|.+++|+|+++++++|+.||.|++||+++
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 7888888887 567899999999999999999987 66777888999999999999999999999999999999987
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
++ .+..+.+|...|.++.|+ +++|++++.||.|++||+.... ..... ++...+..++
T Consensus 342 ~~----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~---------------~~~~~--~~~~~~~~~~ 398 (464)
T 3v7d_B 342 GE----LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS---------------RKFSY--HHTNLSAITT 398 (464)
T ss_dssp TE----EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---------------EEEEE--ECTTCCCEEE
T ss_pred Cc----EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc---------------eeeee--cCCCCccEEE
Confidence 65 477888999999999998 5799999999999999986432 12222 3466788899
Q ss_pred ecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEec
Q psy14815 291 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 344 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 344 (479)
|+++++++++++ ||.|++||+.+++ ++......|...|.+++|+
T Consensus 399 ~~~~~~~l~~~~-dg~i~iwd~~~g~---------~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 399 FYVSDNILVSGS-ENQFNIYNLRSGK---------LVHANILKDADQIWSVNFK 442 (464)
T ss_dssp EEECSSEEEEEE-TTEEEEEETTTCC---------EEESCTTTTCSEEEEEEEE
T ss_pred EEeCCCEEEEec-CCeEEEEECCCCc---------EEehhhccCCCcEEEEEec
Confidence 999999999998 8999999999998 5666567899999999997
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3e-37 Score=289.85 Aligned_cols=290 Identities=11% Similarity=0.008 Sum_probs=236.0
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|...+...+|.+.|++++|+|++++|++++.||.|++||+.+++...
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~--------------------------------- 47 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV--------------------------------- 47 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE---------------------------------
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc---------------------------------
Confidence 44566678999999999999999999999999999999987654211
Q ss_pred eeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEEC-CCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDK-RSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
......+|...|.+++|+|+++ +|++|+.||.|++||+ .+++ ...+.+ |...|.+++|+| ++.+++++.||
T Consensus 48 -~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 48 -DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDG 122 (342)
T ss_dssp -EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTS
T ss_pred -cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCC
Confidence 0111247889999999999999 9999999999999999 8875 366778 999999999999 99999999999
Q ss_pred cEEEEEeCC---------CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC-cccceEeeeeecCCCc
Q psy14815 157 SVWVWEVGE---------EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK-AEADWINFATLKSHTS 226 (479)
Q Consensus 157 ~i~vwd~~~---------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~ 226 (479)
.|++||+++ . .....+. |...+.+++|+|++ +++++.|+.|++||+++ ... ........|..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~ 194 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKN---LNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD--NGTIEESGLKY 194 (342)
T ss_dssp EEEEECHHHHTTBCEEEEE---SCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC--CCEEEECSCSS
T ss_pred eEEEEcccccccccccccC---CeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc--cceeeecCCCC
Confidence 999999986 4 3333444 78899999999877 99999999999999997 443 12334456888
Q ss_pred cEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc--------cccEEEEEecCCCCe
Q psy14815 227 TVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDL 297 (479)
Q Consensus 227 ~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~l~~~~~~~~ 297 (479)
.+.+++|+| +++++++++.||.|++|+++...... .......+..|. ...|.+++|+|++++
T Consensus 195 ~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 265 (342)
T 1yfq_A 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY---------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265 (342)
T ss_dssp CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST---------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc---------ccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence 999999999 99999999999999999986651100 001134455541 348999999999999
Q ss_pred EEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc-ccceeEEEecCCCCCCCcccccH
Q psy14815 298 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPEPQKTNLTL 357 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~~~~~~~ 357 (479)
|++++.||.|++||+.+++ ++.. +.+| ..+|++++ |++++|+.++...
T Consensus 266 l~~~~~dg~i~vwd~~~~~---------~~~~-~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 266 LYTAGSDGIISCWNLQTRK---------KIKN-FAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEEEETTSCEEEEETTTTE---------EEEE-CCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred EEEecCCceEEEEcCccHh---------Hhhh-hhcccCCCceEec--CCCCeEEEEecCC
Confidence 9999999999999999886 3434 4677 99999999 9999998877543
No 58
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=300.68 Aligned_cols=297 Identities=14% Similarity=0.243 Sum_probs=237.2
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEeccc----ccccccccCC----------Cc-cceEEEeecCCcEEEecCC
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI----REPYEKLHGL----------PV-ETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~----~~~~~~~~~~----------~~-~~~~~~~~~~~~i~~w~~~ 73 (479)
.|...|++++|+|++++|++|+.||.|++||+.+ .+.+..+..+ +. +..+++++.|+.+++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5899999999999999999999999999999987 3344444433 44 6778888999999999998
Q ss_pred CCCCc----eeeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCC------CCcEEEEEE
Q psy14815 74 SFGNK----FTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGH------ENEVKSVTW 142 (479)
Q Consensus 74 ~~~~~----~~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~l~~ 142 (479)
..... ..........|...|.+++|+|+ +.++++++.|+.|++||+++++ ....+..+ ...|.+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEEE
Confidence 64411 11111123578999999999998 7899999999999999999986 45666655 789999999
Q ss_pred cCCC-CEEEEEeCCC---cEEEEEeCCCCceeeeeeee-ccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 143 SKNG-QFLATCSRDK---SVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 143 ~~~~-~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
+|++ .++++++.|+ .|++||+++.. .....+. .|...|++++|+| ++++|++++.||.|++||+++++.
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--- 297 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--- 297 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE---
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc---
Confidence 9987 6899999998 99999999864 3445566 8999999999999 899999999999999999997653
Q ss_pred eeeeecCCCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCC---C------------------CCceEE
Q psy14815 217 NFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPD---N------------------DSVWKC 274 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~------------------~~~~~~ 274 (479)
+..+..|...|.+++|+|++ .+|++++.|+.|++||+............. . ......
T Consensus 298 -~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 298 -LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376 (416)
T ss_dssp -EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC
T ss_pred -ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc
Confidence 67788999999999999999 899999999999999998765443221100 0 000000
Q ss_pred EEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 275 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 275 ~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
..... +..++.+++|+|+|++|++++.|+.|+||++.+.
T Consensus 377 -~~~~~-~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 377 -QAPTW-YGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -CCCST-TCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred -cCCcc-ccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 01111 3667889999999999999999999999998864
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.9e-37 Score=334.22 Aligned_cols=330 Identities=20% Similarity=0.334 Sum_probs=265.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
..++.+|.+.|++++|+|+|++|++|+.||+|++||+.+++.+..+..+ +++..+++++.|+.+++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 3457799999999999999999999999999999999999887776654 567788899999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
+.. ......+|...|.+++|+| ++.++++|+.|+.|++||+.+++ ....+.+|...|.+++|+|+++++++
T Consensus 688 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 688 TGK-----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp TCC-----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred CCc-----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEE
Confidence 532 1222358999999999999 55689999999999999999987 67788899999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeee----------------------------------------------------eeeeccc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECA----------------------------------------------------AVINAHI 179 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~----------------------------------------------------~~~~~~~ 179 (479)
++.||.|++||+++....... ....+|.
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 999999999999765321111 0112677
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
..+.+++|+|+++++++++.||.|++||+.++. ....+.+|...|.+++|+|++++|++++.||.|++||+.....
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRL----KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 889999999999999999999999999999765 4677889999999999999999999999999999999764322
Q ss_pred CCCCCCCCCC-----CceEE---------EEEEe-------ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 260 SAGIPTPDND-----SVWKC---------VCTLS-------GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 260 ~~~~~~~~~~-----~~~~~---------~~~~~-------~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
.......... ..... ..... ......+.+++|+|+++++++|+.||.|++|++.+++
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-- 994 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-- 994 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS--
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc--
Confidence 1111000000 00000 00000 0124579999999999999999999999999999887
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
......+|...|++++|+|++++|+.++
T Consensus 995 --------~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 995 --------VFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp --------CEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred --------eeeecccCCCceEEEEECCCCCEEEEEc
Confidence 3344568999999999999999996653
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4e-37 Score=336.95 Aligned_cols=333 Identities=18% Similarity=0.259 Sum_probs=267.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC------------ccceEEEeecCCcEEEe
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP------------VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~i~~w 70 (479)
++.++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..+. ....+++++.|+.+++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 457788999999999999999999999999999999999998887776542 33457788899999999
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE----------------------
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA---------------------- 128 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~---------------------- 128 (479)
|+.... ......+|...|++++|+|+++++++++.||.|++||+.+++.....
T Consensus 729 d~~~~~-----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 729 DLNQKE-----CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp ETTSSS-----EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred ECCCcc-----hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 998532 12224689999999999999999999999999999998776421111
Q ss_pred -------------------------------EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec
Q psy14815 129 -------------------------------TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 177 (479)
Q Consensus 129 -------------------------------~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 177 (479)
...+|...|.+++|+|++.++++++.||.|++||+.+. .....+.+
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~ 880 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---LKVADCRG 880 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---EEEEEECC
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---ceeeecCC
Confidence 11267788999999999999999999999999999987 66677889
Q ss_pred cccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--------------------------------------------
Q psy14815 178 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-------------------------------------------- 213 (479)
Q Consensus 178 ~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------------------------- 213 (479)
|...|++++|+|++++|++++.||.|++||+.+...
T Consensus 881 h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP 960 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEEC
T ss_pred CccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcc
Confidence 999999999999999999999999999998642100
Q ss_pred -------------------------------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC
Q psy14815 214 -------------------------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262 (479)
Q Consensus 214 -------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 262 (479)
.......+.+|...|++++|+|++++|++++.||.|++||+........
T Consensus 961 ~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 0012334567889999999999999999999999999999876532211
Q ss_pred CCCCCC-------------------------CCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 263 IPTPDN-------------------------DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 263 ~~~~~~-------------------------~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
...... ....++...+.+| ...|.+++|+|+++++++++.||.|++||+.+++
T Consensus 1041 ~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~- 1118 (1249)
T 3sfz_A 1041 QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCH-QGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS- 1118 (1249)
T ss_dssp BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECC-SSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS-
T ss_pred ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEccc-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc-
Confidence 100000 0112234455565 7789999999999999999999999999999887
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
......+|...|++++|+|++++|+.+.
T Consensus 1119 ---------~~~~l~~h~~~v~~~~~s~dg~~lat~~ 1146 (1249)
T 3sfz_A 1119 ---------PLHELKGHNGCVRCSAFSLDGILLATGD 1146 (1249)
T ss_dssp ---------CSBCCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred ---------eeeeeccCCCcEEEEEECCCCCEEEEEe
Confidence 4445578999999999999999997654
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=302.80 Aligned_cols=259 Identities=12% Similarity=0.130 Sum_probs=205.8
Q ss_pred ccccc-cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 3 NSQTL-KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 3 ~~~~l-~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
++.++ ++|.+.|++++|+| ++++|++|+.||+|+|||+.+.+....+ .
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~------------------------------~ 103 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY------------------------------S 103 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC------------------------------S
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc------------------------------c
Confidence 35567 89999999999999 9999999999999999998762211100 0
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC---CCeEE------EeEEEe--C--CCCcEEEEE--EcCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR---SGQFE------CNATLE--G--HENEVKSVT--WSKN 145 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~---~~~~~------~~~~~~--~--~~~~v~~l~--~~~~ 145 (479)
. ....+|...|++++|+|++++|++|+.||.|++||+. +++.. .+..+. . +...+.++. ++++
T Consensus 104 ~--~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 104 S--SLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp C--SEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred e--eeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC
Confidence 0 0112589999999999999999999999999999994 44321 111121 2 456677777 5678
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK- 222 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 222 (479)
+.+|++|+.||.|++||+++. +....+.. |...|++++|+|++++|++|+.||.|++||++++. .+..+.
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~ 254 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTL---ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV----LIRSWSF 254 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTC---CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE----EEEEEBC
T ss_pred CCEEEEEeCCCeEEEEeCCCC---eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc----EEEEEec
Confidence 999999999999999999987 45556666 88999999999999999999999999999999754 355554
Q ss_pred CCCccEEEEEEc----cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------------
Q psy14815 223 SHTSTVWSLAFD----RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----------------- 281 (479)
Q Consensus 223 ~~~~~v~~~~~~----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 281 (479)
.|...|.+++|+ +++.+|++++.||.|++||++... ++..+.+|
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH---------------CQYAFINSDEQPSMEHFLPIEKGLE 319 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE---------------EEEEEESSSSCCCGGGGSCBCSSGG
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc---------------EEEEEEcCCCCCccceecccccccc
Confidence 678899999665 467799999999999999986543 23333322
Q ss_pred --------ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 282 --------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 282 --------~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+...|++++|+ ++++|++|+.||.|++||+.+++
T Consensus 320 ~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGG
T ss_pred cceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcc
Confidence 46779999999 77899999999999999998876
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=302.31 Aligned_cols=301 Identities=14% Similarity=0.226 Sum_probs=220.5
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|.+.|++++|+|+|++||+|+.||.|+|||+.+++...... ..... ......+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~-------------------------~~~~~-~~~~~~~ 79 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS-------------------------RGEYN-VYSTFQS 79 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC-------------------------CCCEE-EEEEEEC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc-------------------------cccee-Eeccccc
Confidence 368999999999999999999999999999988765321110 00001 1112246
Q ss_pred cC------------CcEEEEEECCCC--CEEEEEECCCeEEEEECCCCeEE-----------------------------
Q psy14815 89 HQ------------RTIRETAWSPCG--NFIASASFDATTAVWDKRSGQFE----------------------------- 125 (479)
Q Consensus 89 ~~------------~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~----------------------------- 125 (479)
|. ..|++++|+|++ .+|++++.|+.|++||+.+++..
T Consensus 80 h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 159 (447)
T 3dw8_B 80 HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRP 159 (447)
T ss_dssp CCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEE
T ss_pred ccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccc
Confidence 66 889999999998 79999999999999998764321
Q ss_pred --------EeEE-EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee-------eeeccccceeEEEEec
Q psy14815 126 --------CNAT-LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-------VINAHIQDVKKVRFHP 189 (479)
Q Consensus 126 --------~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~~~v~~l~~~~ 189 (479)
.... ..+|...|.+++|+|++++|++| .||.|++||++... .... .+..|...|++++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p 236 (447)
T 3dw8_B 160 MDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHP 236 (447)
T ss_dssp EEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECS
T ss_pred hheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECC
Confidence 0112 36799999999999999999999 79999999998432 2222 3568899999999999
Q ss_pred CC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------------cEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 190 FD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTS------------TVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 190 ~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
++ ++|++|+.||.|++||++++.........+..|.. .|.+++|+|++++|++++. +.|++||++.
T Consensus 237 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 237 NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 98 99999999999999999976632122456666765 8999999999999999998 9999999975
Q ss_pred CCCCCCCCCCCCCCceEEEEEEeccccc---------------cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC--
Q psy14815 257 PGNSAGIPTPDNDSVWKCVCTLSGHHGR---------------TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-- 319 (479)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-- 319 (479)
... ++..+.+| .. .+..++|+|++++|++|+.||.|++||+.+++...
T Consensus 316 ~~~--------------~~~~~~~~-~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 316 ENR--------------PVETYQVH-EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp CSS--------------CSCCEESC-GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred Ccc--------------ccceeecc-ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 222 12344444 21 13459999999999999999999999999876100
Q ss_pred ---C--------ceee---------EEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 ---D--------MVSF---------DLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ---~--------~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+ .... .........+...|..++|+|++.+|+.+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT 435 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe
Confidence 0 0000 000000113456789999999999987654
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.1e-36 Score=275.16 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=205.7
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.|++|++||+.++.......+.+|.+.|.+++|++ ++++|++|+.||+|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 46899999999999999999999999999999997654346788999999999999986 4899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-----
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 236 (479)
+++. ......+..|...|++++|+|+ +++|++++.|+.|++||++.... .....+.+|...|.+++|+|+
T Consensus 85 ~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 85 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp SSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--BCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCc-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--eeeeeeecccCccceEeecCCccccc
Confidence 8753 1344567789999999999997 88999999999999999986542 113456789999999999997
Q ss_pred --------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---CeEEEEeCCC
Q psy14815 237 --------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDD 305 (479)
Q Consensus 237 --------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~dg 305 (479)
+++|++|+.|++|++||++... ..+.+...+.+| ...|.+++|+|++ .+|++++.|+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCC
Confidence 5799999999999999986542 223456778887 8899999999984 8999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+|++||++...... .........|...|.+++|+|++++|+.+.
T Consensus 230 ~v~iWd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 230 TCIIWTQDNEQGPW-----KKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp CEEEEEESSTTSCC-----EEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred cEEEEEeCCCCCcc-----ceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 99999998753110 011111246788999999999999997664
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=305.98 Aligned_cols=297 Identities=11% Similarity=0.078 Sum_probs=217.4
Q ss_pred cccceEEEEECCCC---------CeEEE-------------------eeCCCcEEEEeccccccc----ccc--------
Q psy14815 10 HQGRVWNVSWNPQG---------TMISS-------------------CGEDKNIRLWVMVIREPY----EKL-------- 49 (479)
Q Consensus 10 h~~~V~~l~~s~~~---------~~l~t-------------------~~~dg~v~iwd~~~~~~~----~~~-------- 49 (479)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788889998876 56665 557899999999876532 111
Q ss_pred --cCCCc------cceEEEeecCCcEEEecCCCCCCc------eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEE
Q psy14815 50 --HGLPV------ETSLRQLVEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 115 (479)
Q Consensus 50 --~~~~~------~~~~~~~~~~~~i~~w~~~~~~~~------~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~ 115 (479)
...+. ...+++++.|++|++|++...... .........+|...|++++|++++ .|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE
Confidence 11232 357888999999999999753221 001112346789999999999864 899999999999
Q ss_pred EEECCCCeEEEeEEEeCCCCcEEEE--EEcCCC-CEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc--ceeEEEEecC
Q psy14815 116 VWDKRSGQFECNATLEGHENEVKSV--TWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--DVKKVRFHPF 190 (479)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~v~~l~~~~~ 190 (479)
+||++++. .....+.+|...|.++ .|++++ .+|++|+.|++|++||+++. .+...+.+|.. .|.+++|+|+
T Consensus 291 lWD~~~~~-~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~---~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 291 EFDLTDPE-VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI---ATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp EEETTBCS-SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---HHHCEEEEECSCCSCCCEEEETT
T ss_pred EEECCCCC-CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---CcccccccccccCcccceEeCCC
Confidence 99998764 2445688999999999 578887 89999999999999999876 33444555543 4789999999
Q ss_pred CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC---------
Q psy14815 191 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--------- 261 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--------- 261 (479)
++.+++++.|++|++||++.+.. ...+.+|.+.|++++|+|++++|++|+.||+|++||+.......
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred cCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcccee
Confidence 99999999999999999997653 45677899999999999999999999999999999975431110
Q ss_pred -----CCC-CCCCC--------------CceEEEEEEeccccccEEEEEecCCCC---eEEEEeCCCeEEEcccCCCC
Q psy14815 262 -----GIP-TPDND--------------SVWKCVCTLSGHHGRTIYDISWCHLTD---LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 262 -----~~~-~~~~~--------------~~~~~~~~~~~~~~~~i~~l~~~~~~~---~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+. .+... ....++.++.+| ..+|.+++|+|++. ++++|+.||.|+||++....
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh-~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAH-GINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------C-CCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCC-CceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 000 00000 123456667776 78999999999964 99999999999999987653
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=285.66 Aligned_cols=285 Identities=15% Similarity=0.215 Sum_probs=225.5
Q ss_pred cccccccccccceEEEEECCC---CCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~---~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
..++.+++|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~------------------------------- 78 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI------------------------------- 78 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-------------------------------
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-------------------------------
Confidence 456788999999999999999 69999999999999999875 2221
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE--cCCCCEEEEEeCC
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCSRD 155 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~~~~~d 155 (479)
.....+|...|++++|+|++++|++++.||.|++||+.+++.. .+..|...|.+++| ++++++|++++.|
T Consensus 79 -----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 79 -----PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp -----EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETT
T ss_pred -----EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCC
Confidence 1112578999999999999999999999999999999998632 35569999999999 8899999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
|.|++||+++.+ ....+..+. .+.++.+. ...+++++.++.+++|+++.......... ..+...+.++.+.+
T Consensus 151 g~i~vwd~~~~~---~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 222 (368)
T 3mmy_A 151 KTLKFWDTRSSN---PMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIE--SPLKHQHRCVAIFK 222 (368)
T ss_dssp SEEEEECSSCSS---CSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECC--CSCSSCEEEEEEEE
T ss_pred CcEEEEECCCCc---EEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhcc--ccccCCCceEEEcc
Confidence 999999999874 444455443 55666665 45889999999999999987654322222 23444556666655
Q ss_pred CCCE----EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----------cccEEEEEecCCCCeEEE
Q psy14815 236 IGSR----LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----------GRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 236 ~~~~----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~~~~~~~~l~~ 300 (479)
+... +++++.||.|++||++..... .....+.+|. ..+|++++|+|++++|++
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 290 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPPNPA------------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT 290 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCSCHH------------HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCCCcc------------ccceeeeeeecccccccccccccceEEEEEecCCCEEEE
Confidence 5544 999999999999998654220 1234444442 227999999999999999
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccc
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNL 355 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 355 (479)
++.||.|++||+.+++ ....+.+|..+|++++|+|++++|+.++.
T Consensus 291 ~~~dg~i~iwd~~~~~----------~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 291 VGSDGRFSFWDKDART----------KLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EETTSCEEEEETTTTE----------EEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred EccCCeEEEEECCCCc----------EEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 9999999999999886 33445689999999999999999988763
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-36 Score=317.53 Aligned_cols=195 Identities=9% Similarity=0.063 Sum_probs=159.3
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc---------CCCccceEEEeecCCcEEEecCCCCCC
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------GLPVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
..||.+.|++++|+|++++||+|+.||+|+||+....+....+. ..+ +..+++++.|+++++||++....
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 45899999999999999999999999999999987765443322 224 55789999999999999985321
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe---------EEEeCCCCcEEEEEEcCC-CC
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN---------ATLEGHENEVKSVTWSKN-GQ 147 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~---------~~~~~~~~~v~~l~~~~~-~~ 147 (479)
. .. ..|...|++++|+|+++++++|+.||.|++||+++++.... ..+.+|.+.|.+++|+|+ +.
T Consensus 92 ~----~~--~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 92 L----TT--VFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp E----EE--EECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred E----EE--EcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 1 11 13668999999999999999999999999999998864211 223678899999999995 57
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeecc------------------ccceeEEEEecCCCEEEEEEcCCcEEEEecC
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAH------------------IQDVKKVRFHPFDNILASASYDDTVKLFKED 209 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------------------~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~ 209 (479)
.+++|+.||.| +||+++. +....+..| ...|++++|+|++++|++|+.||.|++||++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEECSSCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred EEEEEeCCCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 89999999999 9999987 334444433 5779999999999999999999999999998
Q ss_pred Ccc
Q psy14815 210 KAE 212 (479)
Q Consensus 210 ~~~ 212 (479)
+++
T Consensus 242 ~g~ 244 (902)
T 2oaj_A 242 SGH 244 (902)
T ss_dssp TCC
T ss_pred CCc
Confidence 754
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=281.74 Aligned_cols=283 Identities=22% Similarity=0.262 Sum_probs=223.9
Q ss_pred ccccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
..+.+++|.+.|++++|+| ++++|++|+.||.|++||+.+++....+.... ....
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------------------------~~~~ 90 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA------------------------VCSI 90 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE------------------------EEEE
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc------------------------cccc
Confidence 3567889999999999999 99999999999999999998877654431100 0000
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQFLATCSRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~ 157 (479)
......+|...|.+++|+| ++.+|++++.||.|++||+.+++ ....+. +...+.++.|++. +.++++++.||.
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ--TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPK 167 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE--EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSS
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc--cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCe
Confidence 0001246899999999999 77899999999999999999986 344444 6778999999984 459999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEe------------eeeecCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN------------FATLKSH 224 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~------------~~~~~~~ 224 (479)
|++||+++. .....+..|...|++++|+|+++ ++++++.||.|++||++........ ......|
T Consensus 168 v~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 168 VQLCDLKSG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp EEEEESSSS---CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred EEEEeCCCc---ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 999999987 45567788999999999999988 5899999999999999876521111 1122578
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC--------------------------------CCCce
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD--------------------------------NDSVW 272 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------------------------~~~~~ 272 (479)
...|.+++|+|++++|++++.||.|++||+............. .....
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 8999999999999999999999999999998765432211100 00234
Q ss_pred EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++..+.+| ...|++++|+|++++|++++.||.|++|++.+.+
T Consensus 325 ~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 325 EQITMLKGH-YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp CEEEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred cceeeeccC-CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 567777776 7899999999999999999999999999999886
No 68
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.5e-37 Score=294.71 Aligned_cols=277 Identities=17% Similarity=0.237 Sum_probs=223.0
Q ss_pred ccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-----
Q psy14815 49 LHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ----- 123 (479)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~----- 123 (479)
+...+++..+++++.|+++++||..... .......|...|.+++|+|++++|++|+.|+.+++||+.+..
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTE-----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc-----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence 3345677889999999999999987422 122335789999999999999999999999999999987532
Q ss_pred EEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeee--eeeccccceeEEEEec-CCCEEEEEEc
Q psy14815 124 FECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRFHP-FDNILASASY 199 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~l~~~~-~~~~l~~~~~ 199 (479)
......+.+|.+.|.++.|+|+ +..|++|+.|++|++||+++++...... ...+|...|.+++|++ ++++|++|+.
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 1233467889999999999996 4579999999999999999874332221 1157889999999987 7899999999
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
|+.|++||++... ..+..+.+|...|.+++|+|++++|++|+.||+|++||++.+ .++..+.
T Consensus 227 D~~v~~wd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~---------------~~~~~~~ 288 (380)
T 3iz6_a 227 DTTVRLWDLRITS---RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG---------------HQLQVYN 288 (380)
T ss_dssp TSCEEEEETTTTC---CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT---------------EEEEEEC
T ss_pred CCeEEEEECCCCC---cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC---------------cEEEEec
Confidence 9999999998543 246778899999999999999999999999999999998554 3444444
Q ss_pred ccc------cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 280 GHH------GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 280 ~~~------~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+. ...|++++|+|++++|++|+.||.|++||...++ ....+.....+|.+.|++++|+|++++|+++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE------MVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC------EEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc------eEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 321 2358999999999999999999999999998876 0111223336899999999999999999776
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 363 s 363 (380)
T 3iz6_a 363 S 363 (380)
T ss_dssp C
T ss_pred e
Confidence 5
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=287.74 Aligned_cols=288 Identities=15% Similarity=0.186 Sum_probs=231.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecCCCCCCc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
+|.+.|++++|+|++++|++++.||.|++|| .+++.+..+.. .+.+..+++++.++.+++|++......
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 3788999999999999999999999999999 55555554443 356778889999999999999742211
Q ss_pred eeeeEEeccccCCc---------------EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc
Q psy14815 79 FTAKAILSDGHQRT---------------IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 143 (479)
Q Consensus 79 ~~~~~~~~~~~~~~---------------v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 143 (479)
.....+... +.+++|+|++ .+++++.+|.|++||+.+++ ....+..|...|.+++|+
T Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 185 -----QHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKT--PTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp -----EEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSS--CSEEECCCSSCEEEEEEE
T ss_pred -----EEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCc--eeeeeccCCCceEEEEEC
Confidence 112233333 8999999875 68899999999999999886 567788899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++++|++++.||.|++||++.. .....+..|...+.+++|+|++ ++++++.|+.|++||++++. .+..+..
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----~~~~~~~ 328 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNG---NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT----LLALSIV 328 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSB---SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE----EEEEEEC
T ss_pred CCCCEEEEEcCCCEEEEEECCCC---ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc----EeEeccc
Confidence 99999999999999999999887 4556677899999999999999 99999999999999998655 3667778
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC-----CCceEEEEEEeccccc-cEEEEEecCCCCe
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN-----DSVWKCVCTLSGHHGR-TIYDISWCHLTDL 297 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~i~~l~~~~~~~~ 297 (479)
|...|.+++|+|++++|++++.||.|++||+.............. .....++..+.+|... .|++++|+|++++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSE
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCce
Confidence 999999999999999999999999999999865432111000000 0112367788887444 9999999999999
Q ss_pred EEEEeCCCeEEEcccC
Q psy14815 298 IATACGDDAIRIFKEN 313 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~ 313 (479)
|++++.||.|++|+++
T Consensus 409 l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 409 ISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEESSSCCEEEECC
T ss_pred EEEEecCceEEEEeec
Confidence 9999999999999985
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-36 Score=313.27 Aligned_cols=338 Identities=10% Similarity=0.069 Sum_probs=231.9
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc-----------ccccC----------CCc-cceEEEe
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-----------EKLHG----------LPV-ETSLRQL 61 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-----------~~~~~----------~~~-~~~~~~~ 61 (479)
+.++. |.+.|++++|+|++++|++|+.||+|++||+.+++.. ..+.. ++. ...++++
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 34554 6789999999999999999999999999999877642 11111 232 3567888
Q ss_pred ecCCcEEEecCCCCCCceeeeEE-------------eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE
Q psy14815 62 VEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 62 ~~~~~i~~w~~~~~~~~~~~~~~-------------~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~ 128 (479)
+.++.+ +||++........... ....|...|++++|+|++.+|++|+.||+|++||+++++.....
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 899999 9999852211111000 01234678999999999999999999999999999988643322
Q ss_pred EE---eC-------------CCCcEEEEEEcC----CC-CEEEEEeCC-----CcEEEEE--------------------
Q psy14815 129 TL---EG-------------HENEVKSVTWSK----NG-QFLATCSRD-----KSVWVWE-------------------- 162 (479)
Q Consensus 129 ~~---~~-------------~~~~v~~l~~~~----~~-~~l~~~~~d-----g~i~vwd-------------------- 162 (479)
.+ .. |...|.+++|++ ++ ..+++|+.+ ..+++|+
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 22 11 345789999953 32 455666444 2455555
Q ss_pred ---------------------------------------------------eCCCCceee----eee-------------
Q psy14815 163 ---------------------------------------------------VGEEDEYEC----AAV------------- 174 (479)
Q Consensus 163 ---------------------------------------------------~~~~~~~~~----~~~------------- 174 (479)
+.++..... ...
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~ 409 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMA 409 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEE
Confidence 322110000 000
Q ss_pred ---------------------eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee--e-----cCCCc
Q psy14815 175 ---------------------INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT--L-----KSHTS 226 (479)
Q Consensus 175 ---------------------~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~-----~~~~~ 226 (479)
+.+|...+.+++|+|++++|++|+.|++|++||+..+......... + .+|..
T Consensus 410 s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~ 489 (902)
T 2oaj_A 410 ASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL 489 (902)
T ss_dssp EEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC
T ss_pred EEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCC
Confidence 1122223334556788999999999999999999876421100111 1 27899
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC-----------------CC-------------CCCCCCceEEEE
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG-----------------IP-------------TPDNDSVWKCVC 276 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------------~~-------------~~~~~~~~~~~~ 276 (479)
.|++++|+|++++|++|+.||+|++||+........ +. .+.-...+.++.
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 569 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPST 569 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeE
Confidence 999999999999999999999999999976532100 00 000011246678
Q ss_pred EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEe----cccc-ccccceeEEEec-----CC
Q psy14815 277 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH----TEHR-AHNQDVNCVAWN-----PV 346 (479)
Q Consensus 277 ~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~----~~~~-~h~~~v~~~~~s-----p~ 346 (479)
.+.+| ..+|++++|+|+| +||+|+.|++|++||++... ++. ..+. +|...|++++|| ||
T Consensus 570 ~l~~h-~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~---------~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~D 638 (902)
T 2oaj_A 570 AVHAN-KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA---------IIYMENIREISGAQSACVTCIEFVIMEYGDD 638 (902)
T ss_dssp EECCC-SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE---------EEEEEEGGGTCSSCCCCEEEEEEEEEECTTS
T ss_pred EEEcC-CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe---------EEEEeehhHhccccccceEEEEEEEEecCCC
Confidence 88886 8899999999999 99999999999999987765 221 2343 899999999999 88
Q ss_pred C---CCCCccc
Q psy14815 347 V---PEPQKTN 354 (479)
Q Consensus 347 ~---~~l~~~~ 354 (479)
| ++|+.++
T Consensus 639 g~~~~~l~sgs 649 (902)
T 2oaj_A 639 GYSSILMVCGT 649 (902)
T ss_dssp SSEEEEEEEEE
T ss_pred CCcceEEEEEe
Confidence 6 6776553
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-36 Score=312.20 Aligned_cols=266 Identities=23% Similarity=0.397 Sum_probs=221.6
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.++.+|.+.|++++|+|++++|++|+.||+|++||+..+.. ...
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-----------------------------------~~~ 46 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----------------------------------KLI 46 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-----------------------------------EEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-----------------------------------ccc
Confidence 567899999999999999999999999999999999863211 111
Q ss_pred EeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEE
Q psy14815 84 ILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVW 159 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~ 159 (479)
....+|..+|++++|+|+ +++|++|+.||.|++||+.+++......+..|...|.+++|+|+ ++.+++|+.||.|+
T Consensus 47 ~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 123679999999999987 99999999999999999999976677888999999999999999 99999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEec-------------CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHP-------------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
+||++.... .....+..|...|++++|+| +++++++|+.||.|++||++++.........+.+|..
T Consensus 127 vwdl~~~~~-~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 205 (753)
T 3jro_A 127 VVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (753)
T ss_dssp EEECCSSSC-CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEeecCCC-cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC
Confidence 999988643 23345678999999999999 5899999999999999999987765567788899999
Q ss_pred cEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 227 TVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 227 ~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.|++++|+|+ +++|++++.||.|++||++....... ........ +...|++++|+|+++++++++.
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~----------~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK----------KTLLKEEK-FPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB----------CCBSSSSC-CSSCCCCEEECTTTCCEEEECS
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce----------eEEeccCC-CCCceEEEEEcCCCCEEEEEcC
Confidence 9999999999 89999999999999999976532211 00111222 3778999999999999999999
Q ss_pred CCeEEEcccCCCC
Q psy14815 304 DDAIRIFKENPEA 316 (479)
Q Consensus 304 dg~i~vw~~~~~~ 316 (479)
||.|++|++....
T Consensus 275 Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 275 DNKVTLWKENLEG 287 (753)
T ss_dssp SSCEECCBCCSSS
T ss_pred CCEEEEEecCCCC
Confidence 9999999998643
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.6e-35 Score=282.43 Aligned_cols=271 Identities=21% Similarity=0.386 Sum_probs=228.5
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.+.|+||++ ++|++|. |++|+|||..+++....+. ..+|...|
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~-----------------------------------~~~~~~~V 150 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQ-----------------------------------MEQPGEYI 150 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEE-----------------------------------CCSTTCCE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEE-----------------------------------ecCCCCcE
Confidence 567999975 5777775 8999999998877654331 24688899
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
++++|+|+|++|++|+.||+|++||+++++ .+..+.+|...+.+++++ +..+++|+.|+.+++||.+... ....
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~--~~~~ 224 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE--HHVA 224 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS--CEEE
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc--eeeE
Confidence 999999999999999999999999999996 678889999999998885 6799999999999999998764 4566
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEEE--eeCCCeEE
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT--CSDDATVK 250 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s--~~~dg~i~ 250 (479)
.+.+|...+..+.++|+++++++++.|+.+++|+...+......+.....|...|.+++|+|.+. .+++ |+.|++|+
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred EecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 78899999999999999999999999999999999887655555677788999999999999765 4444 45799999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
+||+..+ .+...+.. ...+.++.|+|+++.+++++ .|+.|+|||+.+++ ++
T Consensus 305 iwd~~t~---------------~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---------~v- 357 (420)
T 4gga_A 305 IWNVCSG---------------ACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV- 357 (420)
T ss_dssp EEETTTT---------------EEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-
T ss_pred EEeCCcc---------------ccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc---------EE-
Confidence 9998433 55666665 45789999999999888765 68999999999987 34
Q ss_pred ccccccccceeEEEecCCCCCCCccc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+.+|.+.|++++|+|||++|++++
T Consensus 358 ~~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 44579999999999999999997765
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.7e-36 Score=280.01 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=202.2
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.|++|++||+.+++......+.+|...|.+++|++ ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46899999999999999999999999999999999886556778999999999999986 4899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-----
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 236 (479)
+++. ......+.+|...|++++|+|+ +.+|++|+.|+.|++||++.... +.....+.+|...|.+++|+|+
T Consensus 89 ~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 89 ENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-WEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp SSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-EEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-cceeeeeccccCCcceEEEccccCCcc
Confidence 8753 2344567789999999999997 78999999999999999986532 2334566789999999999997
Q ss_pred ------------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----CeEEE
Q psy14815 237 ------------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIAT 300 (479)
Q Consensus 237 ------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~l~~ 300 (479)
+++|++|+.|+.|++||++.. ..+.++..+.+| ...|.+++|+|++ ++|++
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~------------~~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED------------GQWKEEQKLEAH-SDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTT------------SCEEEEECCBCC-SSCEEEEECCCCSSCSCCEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCC------------CccceeeecccC-CCceEEEEecCCCCCCCceEEE
Confidence 478999999999999998432 223556778887 7899999999986 78999
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.|++|++|++........ .......|...|.+++|+|++++|+.+.
T Consensus 234 ~s~D~~v~iw~~~~~~~~~~------~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDASSNTW------SPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EETTCEEEEEECSSTTCCCC------BCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred EcCCCeEEEEEccCccccch------hhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 99999999999876321100 1112246788999999999999997664
No 74
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-36 Score=287.03 Aligned_cols=307 Identities=10% Similarity=0.037 Sum_probs=231.8
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.-...|.+++|+|||+++||++.|++|+ |...+ ..+.+|+..-..+..+.++....|++....... .....
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~----~~~~~ 83 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLEFENKLDFELAQQNG----LLNSQ 83 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSC----SSTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCCCcceEEEEeCCCce----EeecC
Confidence 4568999999999999999999999999 64444 444678888888888888888888887532211 11225
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-----EVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
|...|.+++|+|+|++||+++.||.|++||.++ ....+. |.. .|.+++|||||++|++|+.||+|++||+
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 688999999999999999999999999999543 445556 655 5999999999999999999999999999
Q ss_pred CCCCce----eeeeee----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCccEEEEEEc
Q psy14815 164 GEEDEY----ECAAVI----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 234 (479)
Q Consensus 164 ~~~~~~----~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 234 (479)
.++... -.+..+ .+|...|.+++|+|+| +++++.|+.|++||+...... ....++ .+|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~-~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ-PVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC-CCEEEEECCCSSCCCCEEEE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc-cceeeecccccCcEEEEEEE
Confidence 986420 123444 5677899999999999 889999999999999876531 112345 4788999999999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe--cCCCCeEEEEeCCCeEEEccc
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~~~~~dg~i~vw~~ 312 (479)
++.|++++ +++|++||+... .......+| ...|.+++| +|+++.|+++++||+ ++|..
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~---------------~~~~~~~gh-~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNY---------------SISSLKTGS-LENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTT---------------EEEEEECSC-CSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred --CCEEEEEe-CCeEEEEECCCC---------------eEEEEEcCC-CceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 68899887 699999997433 222222264 889999999 999999999999999 88886
Q ss_pred CCCCCCCCc----------eee----EEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDM----------VSF----DLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~----------~~~----~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.-.-.++. ..+ +... .. .+...|++++|||||+.+|.+.
T Consensus 296 d~~~~spd~~l~a~~d~~v~lW~~~g~~l~-~~-~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 296 DELHVTADNIIAPYLEKKFKKWSTIWNEFN-NY-ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SSEEEECCCSSHHHHHHHHHHTTTTTTSSS-SS-CCEEEEEEEEECTTSSEEEEEE
T ss_pred ccEEECCCceEEEEcCCEEEEEECCCCcee-ee-ccceEEEEEEECCCCCEEEEEE
Confidence 421100000 000 0011 11 2355699999999999886553
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-35 Score=280.85 Aligned_cols=276 Identities=18% Similarity=0.285 Sum_probs=223.4
Q ss_pred ccccce--EEEEECCCCCeEEEeeCCCcEEEEecccccccccccC-----------CCccceEEEeecCCcEEEecCCCC
Q psy14815 9 GHQGRV--WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-----------LPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 9 ~h~~~V--~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
+|...+ .+++|+ +..+++++.||.|++||+.+++....+.. .+++..+++++.++.+++|++...
T Consensus 89 ~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 666554 446666 45688888999999999988776554432 356778889999999999998753
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
. ......+|...|.+++| +++++++++.||.|++||++... .....+.+|...|.+++|+|++++|++|+.|
T Consensus 167 ~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 167 T-----KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp C-----EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred e-----EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 2 12223589999999999 46799999999999999998543 2567788999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
|.|++||+++. .....+..|...|.+++|+|++ .++++++ .|+.|++||++++.. +..+. +...|.+++
T Consensus 239 ~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~----~~~~~-~~~~v~~~~ 310 (401)
T 4aez_A 239 NVVQIWDARSS---IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR----VNTVD-AGSQVTSLI 310 (401)
T ss_dssp SCEEEEETTCS---SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE----EEEEE-CSSCEEEEE
T ss_pred CeEEEccCCCC---CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE----EEEEe-CCCcEEEEE
Confidence 99999999986 5556677899999999999976 5566654 799999999997663 44443 667899999
Q ss_pred EccCCCEEEE--eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 233 FDRIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
|+|+++++++ |+.||.|++||+.... ......+.+| ...|.+++|+|++++|++++.||.|++|
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~-------------~~~~~~~~~h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSG-------------LTKQVDIPAH-DTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTE-------------EEEEEEEECC-SSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCcc-------------ceeEEEecCC-CCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999998 4489999999985431 2334456676 7899999999999999999999999999
Q ss_pred ccCCCC
Q psy14815 311 KENPEA 316 (479)
Q Consensus 311 ~~~~~~ 316 (479)
++.+++
T Consensus 377 ~~~~~~ 382 (401)
T 4aez_A 377 RVYDGD 382 (401)
T ss_dssp ECCC--
T ss_pred ECCCCc
Confidence 999886
No 76
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.6e-35 Score=300.58 Aligned_cols=263 Identities=22% Similarity=0.286 Sum_probs=205.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+++.+|...|++++|+|++++|+||+.||+|+|||+.++.....+
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~---------------------------------- 468 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF---------------------------------- 468 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----------------------------------
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEE----------------------------------
Confidence 4578899999999999999999999999999999999876654332
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe-EEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWV 160 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~v 160 (479)
.+|...|.+++|+|++++|++|+.|++|++||......... ....+|...|.+++|+|++ ..+++|+.|+.|++
T Consensus 469 ---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 469 ---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp ---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred ---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 57999999999999999999999999999999876531111 1124688899999999986 58999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||+++. .....+.+|...|++++|+|++++|++|+.||.|++||++++.. +..+. +...|.+++|+|++.++
T Consensus 546 wd~~~~---~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~sp~~~~l 617 (694)
T 3dm0_A 546 WNLSNC---KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK----LYSLE-ANSVIHALCFSPNRYWL 617 (694)
T ss_dssp EETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE----EECCB-CSSCEEEEEECSSSSEE
T ss_pred EECCCC---cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce----EEEec-CCCcEEEEEEcCCCcEE
Confidence 999987 55677889999999999999999999999999999999997653 44444 45679999999999888
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEE----EEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC----VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
++++ ++.|++||++.......+........... ...... +...+++++|+|++++|++|+.||.|++|++.
T Consensus 618 ~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 618 CAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR-KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEECCCCC-----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCc-eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 7765 56699999865432111110000000000 000000 12247899999999999999999999999985
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-35 Score=281.07 Aligned_cols=253 Identities=19% Similarity=0.344 Sum_probs=210.8
Q ss_pred cccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 10 HQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 10 h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
|...|++++|+|+ +++|++|+.||.|++||+.+++.+..+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------------------------------------ 111 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY------------------------------------ 111 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE------------------------------------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee------------------------------------
Confidence 6688999999998 679999999999999998876654433
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEE---eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+| ++.+|++++.||.|++||+++++ ....+ ..|...|.+++|+|++++|++++.||.|++|
T Consensus 112 -~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 112 -VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp -ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 46899999999999 89999999999999999999986 55566 6799999999999999999999999999999
Q ss_pred EeCCCCceee-------------------------eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc---
Q psy14815 162 EVGEEDEYEC-------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--- 213 (479)
Q Consensus 162 d~~~~~~~~~-------------------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--- 213 (479)
|+++.+.... ......|...|.+++|+ ++++++++.||.|++||+++...
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~ 266 (366)
T 3k26_A 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDID 266 (366)
T ss_dssp ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccc
Confidence 9987532110 11223388999999999 77999999999999999987542
Q ss_pred -------ceEeeeeecCCCccEEEEEEccC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-cc
Q psy14815 214 -------DWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HG 283 (479)
Q Consensus 214 -------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 283 (479)
....+..+..|...|++++|+|+ +++|++++.||.|++||+...... ......+.+| +.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~~ 335 (366)
T 3k26_A 267 KIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH-----------KAKCTTLTHHKCG 335 (366)
T ss_dssp GCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG-----------GCEEEEECCTTCC
T ss_pred ccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc-----------cccceEEcccccC
Confidence 12346677889999999999999 999999999999999998665322 1234566665 26
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
..|++++|+|++++|++++.||.|++||+.+
T Consensus 336 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 336 AAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 8999999999999999999999999999853
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=283.24 Aligned_cols=275 Identities=18% Similarity=0.192 Sum_probs=202.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+++++.+|.+.|++++|+|++++|++++.||+|++||+.+++...
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~---------------------------------- 91 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK---------------------------------- 91 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC----------------------------------
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee----------------------------------
Confidence 3567889999999999999999999999999999999987665110
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
......+|...|.+++|+|++++|++++.|+.|++||+++++. .....+.. |...|.+++|+|++++|++++.||.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 0111357899999999999999999999999999999988751 13566777 999999999999999999999999999
Q ss_pred EEEeCCCC---------------ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 160 VWEVGEED---------------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 160 vwd~~~~~---------------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
+||++... .......+ .|...|++++|+|++++|++++.||.|++||++++......+..+..|
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 99996321 12344455 899999999999999999999999999999999877544446778899
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC--CCCCCCCCCc-------------e---------EEEE----
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--GIPTPDNDSV-------------W---------KCVC---- 276 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~-------------~---------~~~~---- 276 (479)
...|.+++|+|++++|++++.++.+ +|+........ .+........ . ....
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDL 329 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------------
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhh
Confidence 9999999999999999998866655 77665322100 0000000000 0 0000
Q ss_pred --------EEeccccccEEEEEecCCCC----eEEEEeCCCeEEEccc
Q psy14815 277 --------TLSGHHGRTIYDISWCHLTD----LIATACGDDAIRIFKE 312 (479)
Q Consensus 277 --------~~~~~~~~~i~~l~~~~~~~----~l~~~~~dg~i~vw~~ 312 (479)
.+...|...|+++++.+... .|++++.||.|++||+
T Consensus 330 ~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 330 KGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 11112488999999776443 6999999999999985
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.1e-34 Score=264.89 Aligned_cols=271 Identities=21% Similarity=0.382 Sum_probs=225.0
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.++|+||+++ +||+|. |++|+|||+++++.+..+. ..+|...|
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~-----------------------------------~~~~~~~V 70 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQ-----------------------------------MEQPGEYI 70 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEE-----------------------------------CCSTTCCE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEE-----------------------------------ecCCCCeE
Confidence 5789999876 777764 9999999998887655432 24788899
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
++++|+|++++|++|+.||+|++||+++++ .+..+.+|...+.++.+ ++..+++++.++.+++|+..... ....
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~--~~~~ 144 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE--HHVA 144 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCce--eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc--eeEE
Confidence 999999999999999999999999999997 67788899988877665 56799999999999999988764 4556
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE---EEeeCCCeEE
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL---ATCSDDATVK 250 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~s~~~dg~i~ 250 (479)
.+.+|...+..+.+++++++|++++.||.|++||+++++...........+.+.|.++.++|++..+ ++++.++.|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 7788999999999999999999999999999999998775545566677788999999999987643 4677889999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
+||..... ...... +...+..+.|+|++..+++++ .|+.|++||+.+++ ++
T Consensus 225 lwd~~~~~---------------~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---------~~- 277 (318)
T 4ggc_A 225 IWNVCSGA---------------CLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV- 277 (318)
T ss_dssp EEETTTCC---------------EEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-
T ss_pred EEeccccc---------------cccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---------EE-
Confidence 99975432 222222 256899999999999887665 79999999999987 33
Q ss_pred ccccccccceeEEEecCCCCCCCccc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+.+|.+.|++++|+|++++|++++
T Consensus 278 ~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 278 AELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 44579999999999999999997765
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.5e-35 Score=279.28 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=221.8
Q ss_pred ceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 13 RVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 13 ~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
....++++|+...+ ++++.||.|+||++......... .....+|..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---------------------------------~~~~~~h~~ 82 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKN---------------------------------VPLVCGHTA 82 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTT---------------------------------CCCBCCCSS
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCC---------------------------------CceEecCCC
Confidence 34567888876544 45788999999998543321100 011257999
Q ss_pred cEEEEEECC-CCCEEEEEECCCeEEEEECCCCeE-----EEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEeC
Q psy14815 92 TIRETAWSP-CGNFIASASFDATTAVWDKRSGQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd~~ 164 (479)
.|++++|+| ++++|++|+.||.|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.||.|++||++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 999999999 899999999999999999988732 2567888999999999999998 699999999999999999
Q ss_pred CCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCcc-EEEEEEccCCCEE
Q psy14815 165 EEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTST-VWSLAFDRIGSRL 240 (479)
Q Consensus 165 ~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l 240 (479)
++ .....+ ..|...|.+++|+|++++|++++.||.|++||++++.. +..+ ..|.+. +.++.|+|++++|
T Consensus 163 ~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 163 TG---AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp TT---EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEE
T ss_pred CC---CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEE
Confidence 87 555666 78999999999999999999999999999999997653 5555 677765 8999999999999
Q ss_pred EEe---eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-EeCCCeEEEcccCCCC
Q psy14815 241 ATC---SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~dg~i~vw~~~~~~ 316 (479)
++| +.|+.|++||++..... +......+...+.+++|+|++++|++ ++.||.|++|++..++
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEP--------------LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSC--------------SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEeccCCCCceEEEEcCccccCC--------------ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 999 78999999999765432 12222223668999999999998865 5579999999998875
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
. ....+... .|..+|.+++|+|++.+++..
T Consensus 302 ~-----~~~~l~~~--~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 302 P-----FLHYLSMF--SSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp T-----CEEEEEEE--CCSSCCSEEEECCGGGSCGGG
T ss_pred c-----ceEeeccc--ccCCcccceEEecccccceec
Confidence 1 01112221 266899999999999988654
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.3e-34 Score=278.17 Aligned_cols=290 Identities=12% Similarity=0.137 Sum_probs=226.2
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
.+.+.+| ..+....|+|++++|++|+.||.|++||+.+++....+..+ +.+..+++++.|+.+++||+.
T Consensus 91 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 91 SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 3445555 45566678999999999999999999999988776665443 567788999999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC---CCCcEEE-----------
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG---HENEVKS----------- 139 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~----------- 139 (479)
..... ....+|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. +...+.+
T Consensus 170 ~~~~~-----~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 170 DGSNP-----RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT--TIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp TCCCC-----EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred CCcCc-----eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc--eeEEeecCCCCCCCccEEEEecCCccee
Confidence 53322 1235799999999999999999999999999999999986 4555553 3344444
Q ss_pred ----------EEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEec
Q psy14815 140 ----------VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKE 208 (479)
Q Consensus 140 ----------l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~ 208 (479)
++|+|++++|++|+.||.|++||+++.+. .......|...|++++|+|+++ +|++|+.||.|++||+
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 45578899999999999999999998742 2333456888999999999998 9999999999999999
Q ss_pred CCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 209 DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
+++.. ++..+.. |...|.++.+ +++++|++++.|+.|++|++........+... .....+..+ ...|.
T Consensus 321 ~~~~~---~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~------~~~~~~~~~-~~~v~ 389 (420)
T 3vl1_A 321 RSPEC---PVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEF------ETPTFLVSN-DDAVS 389 (420)
T ss_dssp TCTTS---CSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECT------TSCEEECCS-SCCCC
T ss_pred CCCcC---chhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceec------cCccEEccC-CcceE
Confidence 97653 2344444 6778888855 57889999999999999999775443322111 001223444 77899
Q ss_pred EEEecCCCC---eEEEEeCCCeEEEcccCC
Q psy14815 288 DISWCHLTD---LIATACGDDAIRIFKENP 314 (479)
Q Consensus 288 ~l~~~~~~~---~l~~~~~dg~i~vw~~~~ 314 (479)
+++|+|+++ .+++++.+|.+.+|++..
T Consensus 390 ~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 390 QFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 999999999 777778899999999864
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.9e-34 Score=277.17 Aligned_cols=279 Identities=20% Similarity=0.328 Sum_probs=229.4
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCc
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
..+|...|+|++| ++++|++|+.||+|++||+.+++....+..+. ++..+++++.|+.+++||+.....
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~- 205 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM- 205 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE-
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcE-
Confidence 3467788999887 78999999999999999999988887776653 456788899999999999985321
Q ss_pred eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 79 ~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
.....+|...|.+++|++ ..+++|+.||.|++||+.+++.. ....+.+|...|.+++| +++++++|+.||.
T Consensus 206 ----~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 206 ----LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp ----EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred ----EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 222357999999999974 59999999999999999887532 23677889999999999 6889999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
|++||+++. ..+..+..|...|.++.|+ ++++++|+.||.|++||++++.. +..+.+|...|.+++| ++
T Consensus 278 i~vwd~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 278 IKVWNTSTC---EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp EEEEETTTC---CEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEC--CS
T ss_pred EEEEECCcC---cEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEe--cC
Confidence 999999987 5667788899999999995 68999999999999999997653 7788899999999999 68
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++|++|+.||.|++||+......... ....++..+.+| ...|.+++| ++.+|++++.||.|++||+....
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~------~~~~~~~~~~~h-~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAP------AGTLCLRTLVEH-SGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSC------TTTTEEEEECCC-SSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CEEEEEeCCCcEEEEECCCCCCcccc------ccchheeeccCC-CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 89999999999999998665432111 111256777786 789999999 78899999999999999998865
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.1e-34 Score=288.91 Aligned_cols=299 Identities=16% Similarity=0.218 Sum_probs=245.4
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccc----cccccccC-----------CC--ccceEEEeecCCcEEEe
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR----EPYEKLHG-----------LP--VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~----~~~~~~~~-----------~~--~~~~~~~~~~~~~i~~w 70 (479)
..|.+.|++++|+|++++|++++ ++.|++||+.++ +....+.. .+ ++..+++++.|+.+++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 46899999999999999999998 889999999987 65544443 35 66788888899999999
Q ss_pred cCCCCCC---ceeeeEEeccccCCcEEEEEECCCCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc
Q psy14815 71 GKESFGN---KFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 143 (479)
Q Consensus 71 ~~~~~~~---~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 143 (479)
++..... ...........|...|.+++|+|++++|++++.+ +.|++|| .++ ....+.+|...|.+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~--~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN--SLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC--EEEECCSCSSCEEEEEEC
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC--cceeeecCCccEEEEEEC
Confidence 9963210 0112222345789999999999999999999988 6899998 343 567788999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEeCCCCceeeeeeeecccc---ceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 144 KNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---DVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 144 ~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
|++. .+++++.||.|++||+.+. +....+..|.. .|++++|+|+ +++|++++.||.|++||+++++. +
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~ 242 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPF---KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----L 242 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTB---EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----E
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCc---ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE----e
Confidence 9997 8999999999999999876 66677888888 9999999999 99999999999999999987663 5
Q ss_pred eee-c---CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEe
Q psy14815 219 ATL-K---SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISW 291 (479)
Q Consensus 219 ~~~-~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~ 291 (479)
..+ . .|...|.+++|+ ++++|++++.|+.|++||++.. +++..+..+ ....+.++.|
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 306 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS---------------KCVQKWTLDKQQLGNQQVGVVA 306 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT---------------EEEEEEECCTTCGGGCEEEEEE
T ss_pred EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC---------------cEEEEEcCCCCcccCceeEEEe
Confidence 556 5 899999999999 9999999999999999998533 455666654 2467888888
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
. ++.++++++.||.|++||+..++ ......+|..+|++++| |+
T Consensus 307 ~-~~~~l~~~~~~g~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 307 T-GNGRIISLSLDGTLNFYELGHDE----------VLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp E-ETTEEEEEETTSCEEEEETTEEE----------EEEEECCCSSCEEEEET-TT
T ss_pred C-CCCeEEEEECCCCEEEEECCCCc----------EEEEEeCCCCCEEEEEe-cC
Confidence 6 88999999999999999998765 33333567777777777 66
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.8e-34 Score=274.04 Aligned_cols=250 Identities=20% Similarity=0.376 Sum_probs=211.5
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|...|++++|+|+|++|++|+.||+|+|||+++++.+..+
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~------------------------------------ 185 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------------------------------ 185 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------------------------
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE------------------------------------
Confidence 34578899999999999999999999999999999887765443
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...+.+++++ +..+++|+.|+.+++||..... ..+..+.+|...+..+.|+|+++++++++.|+.+++|+...
T Consensus 186 -~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 186 -TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp -CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc-eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 5788899988875 6799999999999999998765 35677889999999999999999999999999999999987
Q ss_pred CCc-eeeeeeeeccccceeEEEEecCC-CEEEEE--EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 166 EDE-YECAAVINAHIQDVKKVRFHPFD-NILASA--SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 166 ~~~-~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+. .........|...|.+++|+|.+ .+++++ +.|++|++||+.++.. ...+. +...+.++.|+++++.++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELI 336 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEE
Confidence 642 23345677888999999999965 555554 4799999999997663 44444 346788999999999988
Q ss_pred Eee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 242 TCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 242 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++ .|+.|++||+.. ++++.++.+| ...|++++|+|+|++|++|+.|++|++||+....
T Consensus 337 ~~sg~~d~~I~iwd~~~---------------~~~v~~l~gH-~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPT---------------MAKVAELKGH-TSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEECTTTCCEEEEETTT---------------CCEEEEECCC-SSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEecCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 765 789999999843 3668889997 7899999999999999999999999999997654
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3e-34 Score=272.59 Aligned_cols=273 Identities=22% Similarity=0.223 Sum_probs=215.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++.+|...|++++|+|++++|++++.||.|++||+.+++....
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~---------------------------------- 89 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT---------------------------------- 89 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE----------------------------------
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee----------------------------------
Confidence 5678889999999999999999999999999999999876543221
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE--EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF--ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....|...|.+++|+|++++|++++.|+.|++||+..++. ........|...|.+++|+|++++|++++.||.|++
T Consensus 90 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 90 -LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp -EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 11246889999999999999999999999999999987652 122333678899999999999999999999999999
Q ss_pred EEeCCC---------------CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 161 WEVGEE---------------DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 161 wd~~~~---------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
||++.. ........+..|...+.+++|+|++++|++++.||.|++||+++++. +..+..|.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~ 244 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA----VATLASET 244 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE----EEEEECSS
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce----eEEEccCC
Confidence 997521 01145666778999999999999999999999999999999997663 67778899
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccC--CC--CCCCCCCCCC---------------CCceEEE------EEEe-
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYK--PG--NSAGIPTPDN---------------DSVWKCV------CTLS- 279 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~--~~~~~~~~~~---------------~~~~~~~------~~~~- 279 (479)
..|.+++|+|++++++++ .|+.|++|++.. +. ....+..+.. ....... ..+.
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS 323 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc
Confidence 999999999999988877 899999999977 21 0000000000 0001111 2333
Q ss_pred ccccccEEEEEec-CCC---CeEEEEeCCCeEEEcccCCCC
Q psy14815 280 GHHGRTIYDISWC-HLT---DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 280 ~~~~~~i~~l~~~-~~~---~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+| ..+|++++|+ +++ .+|++|+.||.|++|++.+.+
T Consensus 324 ~h-~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 324 LH-KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SS-SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cc-cCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 54 8899999977 566 899999999999999997754
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.2e-34 Score=267.43 Aligned_cols=260 Identities=19% Similarity=0.271 Sum_probs=208.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+.+++++|...|++++|+|++++|++++.|+.|++|+.........
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~---------------------------------- 123 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR---------------------------------- 123 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE----------------------------------
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeee----------------------------------
Confidence 4578899999999999999999999999999999999765443222
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~v 160 (479)
...+...+..+.+++++.+|++++.|+.+++||+.... .......+|...+.+++|++++ .++++++.|+.|++
T Consensus 124 ---~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 124 ---FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp ---EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred ---ecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc-eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 13567788899999999999999999999999998765 3445567889999999999864 57889999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||+++. .....+.+|..+|++++|+|++++|++|+.||.|++||+++... +..+. +...|.++.|+|++. +
T Consensus 200 ~d~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~~~~~~-~ 270 (340)
T 4aow_A 200 WNLANC---KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH----LYTLD-GGDIINALCFSPNRY-W 270 (340)
T ss_dssp EETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE----EEEEE-CSSCEEEEEECSSSS-E
T ss_pred EECCCC---ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce----eeeec-CCceEEeeecCCCCc-e
Confidence 999987 66677889999999999999999999999999999999997653 44554 446899999999875 4
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++++.|+.|++||++.......+.. ........+| ...|++++|+|++++|++|+.||.|+|||+.++.
T Consensus 271 ~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~h-~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 271 LCAATGPSIKIWDLEGKIIVDELKQ------EVISTSSKAE-PPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECC------C-------CC-CCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eeccCCCEEEEEECCCCeEEEeccc------cceeeeccCC-CCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 5666799999999854322111000 0111223344 7799999999999999999999999999998875
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.2e-34 Score=299.85 Aligned_cols=321 Identities=17% Similarity=0.235 Sum_probs=253.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~ 72 (479)
.++++.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..+ +++..+++++.++.+++|++
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 45678899999999999999999999999999999999998877766544 56678889999999999999
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcC--CCCE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSK--NGQF 148 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~--~~~~ 148 (479)
+... .......+|...|.+++|+| ++..+++++.||.|++||+.+++ ....+.. +...+.+++|+| ++.+
T Consensus 127 ~~~~----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 127 ENNW----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--PNFTLTTGQERGVNYVDYYPLPDKPY 200 (814)
T ss_dssp GGTS----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS--CSEEEECCCTTCCCEEEECCSTTCCE
T ss_pred CCCc----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeEEecCCCCCEEEEEEEECCCCCE
Confidence 7421 12223467999999999999 88999999999999999998876 3344444 448899999999 9999
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
+++++.||.|++||++++ .....+..|...|++++|+|+++++++++.||.|++||+.++.. ...+..|...+
T Consensus 201 l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~v 273 (814)
T 3mkq_A 201 MITASDDLTIKIWDYQTK---SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV----EKTLNVGLERS 273 (814)
T ss_dssp EEEECTTSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE----EEEECCSSSSE
T ss_pred EEEEeCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEeecCCCcE
Confidence 999999999999999887 56677888999999999999999999999999999999987653 67778889999
Q ss_pred EEEEEccCCCE-EEEeeCCCeEEEEeccCCCCCCCCCCCC---------C-------------------CCceEEEEEEe
Q psy14815 229 WSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPD---------N-------------------DSVWKCVCTLS 279 (479)
Q Consensus 229 ~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~-------------------~~~~~~~~~~~ 279 (479)
.+++|+|++.. +++++.++.+.+|++........+.... . .........+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (814)
T 3mkq_A 274 WCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELG 353 (814)
T ss_dssp EEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEEC
T ss_pred EEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCC
Confidence 99999999873 2444557778999876543221111000 0 00000011112
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
. +...+.+++|+|+|+++++++ |+.+.+|++.... ..+.+.+.+++|+|++++++.+
T Consensus 354 ~-~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~---------------~~~~~~i~~~~~spdg~~la~~ 410 (814)
T 3mkq_A 354 S-VDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR---------------NKAFGKCQDFVWGPDSNSYALI 410 (814)
T ss_dssp C-CSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE---------------EEEEEECSEEEECTTSSCEEEE
T ss_pred C-CccCCceeEECCCCCEEEEec-CCEEEEEECcccc---------------ccCCCceEEEEEeCCCCeEEEE
Confidence 2 355789999999999999988 8999999976543 1345678899999999988654
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=268.37 Aligned_cols=253 Identities=15% Similarity=0.271 Sum_probs=217.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++.+|...|++++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------------- 112 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW--------------------------------- 112 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE---------------------------------
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe---------------------------------
Confidence 46778899999999999999999999999999999999876654332
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeE---------EEeEEEeCCCC--cEEEEEEcCCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQF---------ECNATLEGHEN--EVKSVTWSKNG 146 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~---------~~~~~~~~~~~--~v~~l~~~~~~ 146 (479)
.+...+.+++|+|+++++++++.+ +.|++||+..+.. .....+..|.. .+.+++|+|++
T Consensus 113 -----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (369)
T 3zwl_B 113 -----KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG 187 (369)
T ss_dssp -----ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG
T ss_pred -----ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC
Confidence 267889999999999999999999 9999999876531 12344555666 89999999999
Q ss_pred CEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
++|++++.||.|++||+++.. .....+..|...|.+++|+|++++|++++.||.|++||++++.. ...+. +..
T Consensus 188 ~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~ 260 (369)
T 3zwl_B 188 KYIIAGHKDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDC 260 (369)
T ss_dssp CEEEEEETTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSS
T ss_pred CEEEEEcCCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCC
Confidence 999999999999999998832 56677888999999999999999999999999999999997663 34443 778
Q ss_pred cEEEEEEccCCCEEEEeeCCC--------------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 227 TVWSLAFDRIGSRLATCSDDA--------------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.+.+++|+|+++++++++.++ .+++||.... +++..+.+| ...|.+++|+
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~s 324 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE---------------EEIGRVQGH-FGPLNTVAIS 324 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC---------------CEEEEEECC-SSCEEEEEEC
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC---------------cchhheecc-cCcEEEEEEC
Confidence 899999999999999999988 8999997433 556778887 7899999999
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++++|++++.||.|++|+++.+.
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCCEEEEEcCCCeEEEEECcccc
Confidence 999999999999999999998754
No 89
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.9e-34 Score=278.19 Aligned_cols=279 Identities=20% Similarity=0.408 Sum_probs=219.7
Q ss_pred ccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+.+|.+.|++++|+|+ +.+|++++.||.|++||+.+....... ... ....
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~--------------------------~~~-~~~~ 174 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP--------------------------SGE-CQPD 174 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT--------------------------TCC-CCCS
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc--------------------------ccc-CCCc
Confidence 345689999999999997 789999999999999998753211000 000 0011
Q ss_pred EeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDK 156 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg 156 (479)
....+|...|.+++|+|++. +|++|+.||.|++||+.++. ......+..|...|.+++|+| ++.+|++++.||
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 254 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ 254 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC
Confidence 12357899999999999988 99999999999999998732 122456778999999999999 778999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.|++||++..........+..|...|++++|+|+++ ++++|+.||.|++||++.... ++..+..|...|++++|+|
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECC
Confidence 999999998743455666778999999999999886 688999999999999997442 4667788999999999999
Q ss_pred CCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccC
Q psy14815 236 IGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 313 (479)
Q Consensus 236 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~ 313 (479)
+++ +|++++.|+.|++||+........... ........+..+.+| ...|++++|+|+++ +|++++.||.|++|++.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTED-AEDGPPELLFIHGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHH-HHHCCTTEEEECCCC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccc-cccCCcceEEEcCCC-CCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 985 689999999999999976432211000 000011456666676 78999999999999 89999999999999987
Q ss_pred CC
Q psy14815 314 PE 315 (479)
Q Consensus 314 ~~ 315 (479)
..
T Consensus 410 ~~ 411 (430)
T 2xyi_A 410 EN 411 (430)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.9e-35 Score=282.65 Aligned_cols=255 Identities=16% Similarity=0.156 Sum_probs=198.7
Q ss_pred cccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...+.+|.+.|++|+|+| ++++|+||+.||+|++||++++.....
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~---------------------------------- 202 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF---------------------------------- 202 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE----------------------------------
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE----------------------------------
Confidence 345679999999999998 789999999999999999864332111
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vw 161 (479)
.....+...+.+++|+|++.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 203 -ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp -ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred -eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 011234556889999999999999999999999999765 4567889999999999999876 78899999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------cEEEEEEcc
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS------TVWSLAFDR 235 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------~v~~~~~~~ 235 (479)
|++..+.........+|...|++++|+|++++|++++.||.|++||++++.. ...+..|.. .+....|+|
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 354 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC----PLGLIPHPHRHFQHLTPIKAAWHP 354 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS----EEEECCCCCCCCSSSCCCBCEECS
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc----ceEEecccccccccceeEEEEEcC
Confidence 9998755445555678999999999999999999999999999999997664 222322221 233456677
Q ss_pred CCCEEEEee------------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEEEe
Q psy14815 236 IGSRLATCS------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATAC 302 (479)
Q Consensus 236 ~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~~~ 302 (479)
++..+++++ .++.|++||...+ +++..+..++...|.++ +|+|+|++|++|+
T Consensus 355 ~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---------------~~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 355 RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---------------KMMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---------------CEEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---------------cEEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 666666553 3457999997433 45666665567788887 6999999999876
Q ss_pred CCCeEEEcccCCCC
Q psy14815 303 GDDAIRIFKENPEA 316 (479)
Q Consensus 303 ~dg~i~vw~~~~~~ 316 (479)
|+.|+||+++.++
T Consensus 420 -d~~i~iW~~~~gk 432 (435)
T 4e54_B 420 -GYHILIWSQQEAR 432 (435)
T ss_dssp -SSEEEECCCC---
T ss_pred -CCcEEEEECCcCe
Confidence 7899999998876
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=275.82 Aligned_cols=312 Identities=11% Similarity=0.040 Sum_probs=222.4
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccc---ccccccCCCcc-------------ceEEEeecCC-cEEEecCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE---PYEKLHGLPVE-------------TSLRQLVEDK-NIRLWGKE 73 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~-~i~~w~~~ 73 (479)
..++++++|+|+|++|+++ .++.|++||+.+++ .+..+...... ..+.....+. ....-...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3689999999999977666 47899999999998 55554432110 0000000000 00000000
Q ss_pred C---CCCceeeeEEeccccCCcEEEEEECCCCCEE-EEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 74 S---FGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 74 ~---~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
. .............+|...|++++|+|++++| ++++.||.|++||+. +++.........|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0 0000000011123677789999999999996 899999999999998 775333322236778999999999999
Q ss_pred EEEEEeCCCcEEEEEeCCCCcee-eeeeeeccccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeeee-ec
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFAT-LK 222 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~ 222 (479)
+|++|+.+|.+++|++.+..... ....+.+|...|++++|+|+ +++|++|+.|+.|++||++++.. +.. +.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeeec
Confidence 99999999999999998875433 44467889999999999999 99999999999999999987664 333 56
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec----------------------
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------------------- 280 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 280 (479)
+|...|.+++|+ ++++|++++.|+.|++||+.... ++..+..
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK---------------NLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC---------------EEEEEECHHHHGGGCCTTSBC--------
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc---------------Eeeeecchhhhhhhhhhcccccccccccc
Confidence 899999999999 99999999999999999986543 2333321
Q ss_pred --cccccEEEEEecCCCCeEEEEe-CCCeEEEccc--CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 281 --HHGRTIYDISWCHLTDLIATAC-GDDAIRIFKE--NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 281 --~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.....|.+++|+|++++|++++ .|+.|++|++ ..+. .+.++..+ ..| +.|.+++|+|++.+++
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~------~l~~~~~~-~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG------DLALKQII-TFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT------CEEEEEEE-ECS-SCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC------ceeeccEe-ccC-CceEEEEecCCcEEEE
Confidence 1245799999999999999999 8999999999 4331 11233333 355 7899999999654443
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-33 Score=269.96 Aligned_cols=250 Identities=13% Similarity=0.095 Sum_probs=199.2
Q ss_pred cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 8 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 8 ~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+|...|++++|+| ++++|++++.|+.|++||+.+ .....+ ...
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~----------------------------------~~~ 159 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVF----------------------------------AKT 159 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEE----------------------------------ECC
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEE----------------------------------ecc
Confidence 47999999999999 789999999999999999864 221111 111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~ 165 (479)
..|...|.+++|+|++++|++|+.|+.|++||++ ++ ....+..|...|.+++|+|+++ +|++++.|+.|++||+++
T Consensus 160 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 160 DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3566889999999999999999999999999995 43 5678889999999999999998 999999999999999997
Q ss_pred CCce-eeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeee---eecCCC----------ccEEE
Q psy14815 166 EDEY-ECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFA---TLKSHT----------STVWS 230 (479)
Q Consensus 166 ~~~~-~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~~----------~~v~~ 230 (479)
.+.. .....+ .|...|++++|+| ++++|++++.|+.|++||++++........ ....|. ..+..
T Consensus 237 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 315 (383)
T 3ei3_B 237 IKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIV 315 (383)
T ss_dssp CCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEE
T ss_pred CCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceE
Confidence 4321 333333 6899999999999 999999999999999999987664211110 001122 34555
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
++|+|++++ +++.|+.|++||+... +++..+.++ +...+..++|+|++++|++++ ||.|++
T Consensus 316 ~~~s~dg~~--s~s~d~~i~iwd~~~~---------------~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~i 377 (383)
T 3ei3_B 316 AGRYPDDQL--LLNDKRTIDIYDANSG---------------GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILI 377 (383)
T ss_dssp EECBCCTTT--CTTCCCCEEEEETTTC---------------CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEE
T ss_pred EEecCCccc--ccCCCCeEEEEecCCC---------------ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEE
Confidence 777777776 7889999999998443 556777765 366778889999999999997 999999
Q ss_pred cccCC
Q psy14815 310 FKENP 314 (479)
Q Consensus 310 w~~~~ 314 (479)
||+++
T Consensus 378 w~~~~ 382 (383)
T 3ei3_B 378 WNRED 382 (383)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 99875
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.6e-33 Score=269.30 Aligned_cols=274 Identities=27% Similarity=0.459 Sum_probs=232.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc--------cceEEEeecCCcEEEecCCC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~w~~~~ 74 (479)
+++++.+|.+.|++++|+ +++|++|+.||+|++||+.+++.+..+..+.. +..+++++.|+.+++||+..
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 467889999999999998 67999999999999999999988887776533 46688889999999999985
Q ss_pred CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 75 FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
... .....+|...|.+++| ++.++++|+.||.|++||+++++ ....+.+|...|.++.| ++.++++++.
T Consensus 229 ~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 229 GQC-----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp CCE-----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEET
T ss_pred CcE-----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE--CCCEEEEEeC
Confidence 321 1223579999999999 68899999999999999999886 67788899999999999 7889999999
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---CCccEEEE
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---HTSTVWSL 231 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~v~~~ 231 (479)
||.|++||++++ .....+..|...+.++.++ ++++++|+.||.|++||+++++. +..+.. |...|+++
T Consensus 298 d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 298 DTSIRVWDVETG---NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC----LQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp TSCEEEEETTTC---CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEECSTTSCSSCEEEE
T ss_pred CCeEEEEECCCC---CEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcE----EEEEccCCCCCCCEEEE
Confidence 999999999987 5566778898899888875 67999999999999999987653 455554 88999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe----ccccccEEEEEecCCCCeEEEEeCCCe-
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS----GHHGRTIYDISWCHLTDLIATACGDDA- 306 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~dg~- 306 (479)
+|+ +++|++|+.||.|++||+..+ +.+..+. ..+...|++++|+|++.++++|+.||+
T Consensus 369 ~~~--~~~l~s~~~dg~v~iwd~~~~---------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 369 QFN--KNFVITSSDDGTVKLWDLKTG---------------EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTC---------------CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EEC--CCEEEEEeCCCeEEEEECCCC---------------ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 996 679999999999999998544 3344441 234789999999999999999999997
Q ss_pred ---EEEcccCCC
Q psy14815 307 ---IRIFKENPE 315 (479)
Q Consensus 307 ---i~vw~~~~~ 315 (479)
|.+||++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999998764
No 94
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=100.00 E-value=1.2e-36 Score=278.58 Aligned_cols=120 Identities=33% Similarity=0.596 Sum_probs=116.1
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
+++.+++..+++++|+.++++|||+|||||.++ ++|++|++++|+|+++++||+++|||+||+|||+||+|+|+++.+
T Consensus 29 m~~~eii~~le~~aP~~lae~wDnvGL~vG~~~--~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~ 106 (397)
T 2gx8_A 29 PNGHEIISLFESMYPKHLAMEGDKIGLQIGALN--KPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTD 106 (397)
T ss_dssp CBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTT
T ss_pred ccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCc--cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcC
Confidence 668899999999999999999999999997664 789999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
++++|++.+||+|||+|||+|||||++++||||+||++|||.
T Consensus 107 ~~~~r~i~~li~~~Iavya~HTnlD~~~~GvNd~LA~~LGl~ 148 (397)
T 2gx8_A 107 KAYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQ 148 (397)
T ss_dssp SHHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHCCCeEEEeechhhcCCCCHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999975
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-33 Score=265.80 Aligned_cols=249 Identities=22% Similarity=0.361 Sum_probs=212.1
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.||.|++||+..+.......+.+|...|.+++|+++ +++|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 368999999999999999999999999999999986666677889999999999999987 899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR------ 235 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 235 (479)
++++ ......+..|...|++++|+|+ +++|++++.||.|++||++.... .....+..|...|.+++|+|
T Consensus 87 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 87 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp ETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--CCEEEEECCTTCEEEEEECCCC----
T ss_pred CCCc-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--eeeEEecCCCCceEEEEEcCcccccc
Confidence 9863 2356677789999999999999 99999999999999999987643 23445678999999999999
Q ss_pred -------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC---CCeEEEEeCCC
Q psy14815 236 -------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDD 305 (479)
Q Consensus 236 -------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~---~~~l~~~~~dg 305 (479)
++.+|++++.||.|++||++... ....+...+.+| ...|.+++|+|+ +.+|++++.||
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCC-----------cceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 69999999999999999997543 234566777776 789999999999 89999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|++||+..+... ..........|...|++++|+|++++|+.+.
T Consensus 232 ~i~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 232 TCIIWTQDNEQGP-----WKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp CEEEEEESSTTSC-----CEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEEeCCCCCcc-----ceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 9999999886421 1122233346889999999999999997654
No 96
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=100.00 E-value=1.9e-36 Score=275.57 Aligned_cols=121 Identities=28% Similarity=0.490 Sum_probs=116.0
Q ss_pred ccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccC
Q psy14815 353 TNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVT 432 (479)
Q Consensus 353 ~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~ 432 (479)
..|++.+++..+++++|+.++++|||+|||||.++ ++|+++++++|+|+++++||+++|||+||+|||+||+|+|+++
T Consensus 3 ~~m~~~eii~~le~~~P~~~ae~wDn~GL~vG~~~--~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~ 80 (370)
T 2nyd_A 3 DPMKIADLMTLLDHHVPFSTAESWDNVGLLIGDED--VEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLK 80 (370)
T ss_dssp CCCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCTT--SBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCC
T ss_pred CCcCHHHHHHHHHHhCCHhHcCCCCcCeEEeCCCc--CccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccC
Confidence 34678899999999999999999999999997665 7899999999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 433 NDKWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
.+++ +|++.+||+|||+|||+|||||++++||||+||++|||.
T Consensus 81 ~~~~-~r~i~~li~~~Ialya~HTnlD~~~~GvNd~LA~~Lgl~ 123 (370)
T 2nyd_A 81 ANGY-GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKVMGLK 123 (370)
T ss_dssp SSTH-HHHHHHHHHTTCEEEECCHHHHTSTTSHHHHHHHHTTCE
T ss_pred cCCH-HHHHHHHHHCCCeEEEeechhhccCCcHHHHHHHHcCCC
Confidence 9999 999999999999999999999999999999999999975
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-33 Score=270.98 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=211.3
Q ss_pred ccccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
...++.+|.+.|++++|+| ++++|++|+.||+|++||+.++....... .
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~------------------------------~ 122 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR------------------------------E 122 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC------------------------------S
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC------------------------------C
Confidence 3557889999999999999 99999999999999999998764332110 0
Q ss_pred eEEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 82 KAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
......+|...|.+++|+|++ .+|++++.||.|++||+++++ ....+ ..|...|.+++|+|++++|++++.||.|
T Consensus 123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 200 (402)
T 2aq5_A 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRV 200 (402)
T ss_dssp CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEE
T ss_pred ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcE
Confidence 111235799999999999998 699999999999999999986 56677 7899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeee-eccccc-eeEEEEecCCCEEEEE---EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 159 WVWEVGEEDEYECAAVI-NAHIQD-VKKVRFHPFDNILASA---SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~-~~~~~~-v~~l~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
++||++++ .....+ ..|... +.++.|+|++++|++| +.|+.|++||+++..... ......|...+.+++|
T Consensus 201 ~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 201 RVIEPRKG---TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL--SLQELDTSSGVLLPFF 275 (402)
T ss_dssp EEEETTTT---EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS--EEEECCCCSSCEEEEE
T ss_pred EEEeCCCC---ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc--eEEeccCCCceeEEEE
Confidence 99999987 455555 567665 8999999999999999 789999999998765311 1122356778999999
Q ss_pred ccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 234 DRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 234 ~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+|++++|++ ++.||.|++||+...... ...+..+. +..+|.+++|+|++.++++ .++.+++|++
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~-----------~~~l~~~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPF-----------LHYLSMFS--SKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTC-----------EEEEEEEC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcc-----------eEeecccc--cCCcccceEEeccccccee--cceeEEEEEc
Confidence 999999964 557999999999654321 12233333 3678999999999998875 5679999999
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
.++.
T Consensus 341 ~~~~ 344 (402)
T 2aq5_A 341 HERK 344 (402)
T ss_dssp ETTE
T ss_pred CCCc
Confidence 8764
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-32 Score=269.51 Aligned_cols=277 Identities=20% Similarity=0.300 Sum_probs=225.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC------------CccceEEEeecCCcEEEe
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL------------PVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~i~~w 70 (479)
+++++.+|.+.|++++|+|++ +|++|+.||+|++||+.+++.+..+..+ +.+..+++++.|+.+++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 456788999999999999988 9999999999999999999887777654 234678888999999999
Q ss_pred cCCCCCCceee------------------eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC
Q psy14815 71 GKESFGNKFTA------------------KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 132 (479)
Q Consensus 71 ~~~~~~~~~~~------------------~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~ 132 (479)
|+......... ......+|...+.++ +++++++++|+.||.|++||+.+++ .+..+.+
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~ 308 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSG 308 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE--EEEEECC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc--EEEEecC
Confidence 99864322110 122346788889887 5678999999999999999999986 6778889
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 133 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 133 ~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
|...|.+++|+|+++++++|+.||.|++||++++ +.+..+.+|...|.+++|+ +++|++++.||.|++||+++..
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENG---ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999999999999999987 6677888999999999998 5899999999999999999765
Q ss_pred cceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 213 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
. .... .+...+..++|+++++++++++ ||.|++||+..+ +++......+...|.+++|+
T Consensus 384 ~----~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g---------------~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 384 R----KFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG---------------KLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp E----EEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC---------------CEEESCTTTTCSEEEEEEEE
T ss_pred e----eeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC---------------cEEehhhccCCCcEEEEEec
Confidence 3 2222 3566778889999999999998 899999998554 44454333347899999997
Q ss_pred CCCCeEEEEeCCCeEEEcc
Q psy14815 293 HLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~ 311 (479)
+..++++++.||.+.+|-
T Consensus 443 -~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 443 -GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp -TTEEEEEEEETTEEEEEE
T ss_pred -CCEEEEEEEeCCeEEEEE
Confidence 445566666777666553
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-34 Score=281.32 Aligned_cols=289 Identities=9% Similarity=0.074 Sum_probs=205.7
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC------CCEEEEEECCCeEEEEECCCCeEE------
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC------GNFIASASFDATTAVWDKRSGQFE------ 125 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~t~~~dg~i~iwd~~~~~~~------ 125 (479)
+++++.|++|++|++........ ......+|...|.+++|+|+ +.+||+++.||+|++||+.++...
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~-~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCV-KVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp ------CEEEEEEEEETTTCCEE-EEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hccCCCCceEEEEEccCCCCCce-EEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 44456788999999875332211 11223467789999999996 579999999999999999876311
Q ss_pred ---EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEE--EEecCC-CEEEEEEc
Q psy14815 126 ---CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV--RFHPFD-NILASASY 199 (479)
Q Consensus 126 ---~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~~~~~ 199 (479)
+...+.+|...|++++|+++ ..|++|+.||+|++||++++. .....+..|...|+++ .|+|++ ++|++|+.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred ecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 23467889999999999986 489999999999999998753 2344578899999999 578887 89999999
Q ss_pred CCcEEEEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
|++|++||+++++. ...+.+|. ..|.+++|+|+++.+++++.|++|++||++... ++.+
T Consensus 332 D~tvklWD~~~~~~----~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~---------------~~~~ 392 (524)
T 2j04_B 332 DGYFYIFNPKDIAT----TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF---------------AVHP 392 (524)
T ss_dssp TSEEEEECGGGHHH----HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT---------------CCEE
T ss_pred CCeEEEEECCCCCc----ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc---------------ccee
Confidence 99999999987653 33344444 357899999999999999999999999986543 2356
Q ss_pred EeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc----cccccceeEEEecCCCCCCCcc
Q psy14815 278 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH----RAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 278 ~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+.+| ...|++++|+|++++|++|+.||+|++||+..+. +.... ..+...+.+++|+|++..+...
T Consensus 393 l~gH-~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~----------~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~ 461 (524)
T 2j04_B 393 LVSR-ETTITAIGVSRLHPMVLAGSADGSLIITNAARRL----------LHGIKNSSATQKSLRLWKWDYSIKDDKYRID 461 (524)
T ss_dssp EEEC-SSCEEEEECCSSCCBCEEEETTTEEECCBSCSST----------TTCC------CCCCEEEECBCCSSSCEEEEC
T ss_pred eecC-CCceEEEEeCCCCCeEEEEECCCEEEEEechHhh----------ccccccCccceeeeEEEEeccCCCCCeEEcc
Confidence 6676 8899999999999999999999999999986542 11100 0112257789999998744221
Q ss_pred c---cc----HHHHHHHHHHhCCCccCCCCCcce
Q psy14815 354 N---LT----LHDVVRRLEAMAPLSLAEPWDNVG 380 (479)
Q Consensus 354 ~---~~----~~~~~~~l~~~~p~~~a~~wd~~G 380 (479)
. +. .......+........+-.|++.|
T Consensus 462 ~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 462 SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp CCCCCCC-------------CCCSCCCEEECCST
T ss_pred CCceecccccCCcceeeecCCCceEEEEECCCCC
Confidence 1 11 012333344433444555787764
No 100
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=100.00 E-value=1.2e-35 Score=262.15 Aligned_cols=121 Identities=30% Similarity=0.518 Sum_probs=115.9
Q ss_pred cccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCc
Q psy14815 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTN 433 (479)
Q Consensus 354 ~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~ 433 (479)
+|+..+++..+++++|..++++|||+|||+|.++ ++|++|++++|+|++++++|+++|||+||+|||+||+|+++++.
T Consensus 2 ~M~~~ei~~~le~~~p~~~a~~~D~~GL~vG~~~--~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~ 79 (267)
T 2fyw_A 2 AMLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLD--KGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLA 79 (267)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCT
T ss_pred CccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCc--CccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCcccccc
Confidence 3567899999999999999999999999997654 89999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 434 DKWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++++|++.+|++|||+|||+|||||++++|+|++||++||+.
T Consensus 80 ~~~~~~~i~~li~~~I~lya~Ht~lD~~~~G~n~~La~~Lgl~ 122 (267)
T 2fyw_A 80 SRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE 122 (267)
T ss_dssp TSHHHHHHHHHHHTTCEEEECSHHHHHSTTSHHHHHHHHHTCE
T ss_pred CchHHHHHHHHHHCCCeEEEeeccccccCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999985
No 101
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-32 Score=259.89 Aligned_cols=293 Identities=14% Similarity=0.137 Sum_probs=205.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC--------CCccceE-EEeecCCcEEEecCC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG--------LPVETSL-RQLVEDKNIRLWGKE 73 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~i~~w~~~ 73 (479)
++.++++|.+.|++++|+|||++|++|+.++ ++|||+.+++....... ......+ ++++.++++++||..
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 3456689999999999999999999998775 78999887665443221 1223334 456677899999987
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEE-
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLAT- 151 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~- 151 (479)
.... .....+...|.+++|+++. ++++ .|+.|++||+.++ + .+..+.. +...+++++ .++++
T Consensus 90 ~~~~------~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~--~~~~~~~---~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 90 KKQD------VSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWK--RITDDIR---FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp TTEE------EEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCC--BSSCCEE---EEEEEEEET--TEEEEE
T ss_pred CCcE------EEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCce--eeEEecc---CCceEEEEc--cEEEEe
Confidence 4221 1112367799999998764 4444 3789999999887 4 2233332 444566776 56665
Q ss_pred -EeCCCcEEEEEeCCCCce------------ee-eeeeeccccceeEEEEecCCCEEEEEEcCCc-EEEEecCCcccceE
Q psy14815 152 -CSRDKSVWVWEVGEEDEY------------EC-AAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKAEADWI 216 (479)
Q Consensus 152 -~~~dg~i~vwd~~~~~~~------------~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~ 216 (479)
|+.||.|++||+++.... .+ ...+.+|..+|++++|+|++++|++|+.|++ |++||+++++.
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~--- 230 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL--- 230 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE---
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE---
Confidence 688999999999875310 11 5678899999999999999999999999998 99999997664
Q ss_pred eeeeec-C-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCC------CCCCCce-EEEEEEeccccccEE
Q psy14815 217 NFATLK-S-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT------PDNDSVW-KCVCTLSGHHGRTIY 287 (479)
Q Consensus 217 ~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~i~ 287 (479)
+..+. + |...|.+++|+|++++|++++.|++|++||+........... ......+ .....+......+..
T Consensus 231 -~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 231 -VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp -EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred -EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 56666 4 999999999999999999999999999999976532211000 0000011 011122222233457
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.++|+++++++++++.||.+++|++..++
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 79999999999999999999999987654
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-32 Score=262.02 Aligned_cols=261 Identities=19% Similarity=0.294 Sum_probs=216.1
Q ss_pred cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC
Q psy14815 55 ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE 134 (479)
Q Consensus 55 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~ 134 (479)
+..+++++.++.+++|+...... .......|...|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~----~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~ 176 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSV----SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--KLRTMAGHQ 176 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCE----EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCS
T ss_pred CCCEEEEECCCeEEEeeCCCCcE----eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--EEEEecCCC
Confidence 35678888999999999985321 222234588999999999999999999999999999999886 667888999
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc
Q psy14815 135 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
..|.+++| +++.+++|+.||.|++||++... .....+..|...|.+++|+|++++|++|+.||.|++||++++..
T Consensus 177 ~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~- 251 (401)
T 4aez_A 177 ARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP- 251 (401)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE-
T ss_pred CceEEEEE--CCCEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc-
Confidence 99999999 46799999999999999998543 45667888999999999999999999999999999999997653
Q ss_pred eEeeeeecCCCccEEEEEEccCCC-EEEEee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGS-RLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
...+..|...|.+++|+|++. .+++++ .|+.|++||+... +++..+.. ...|.+++|
T Consensus 252 ---~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~---------------~~~~~~~~--~~~v~~~~~ 311 (401)
T 4aez_A 252 ---KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG---------------ARVNTVDA--GSQVTSLIW 311 (401)
T ss_dssp ---EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC---------------CEEEEEEC--SSCEEEEEE
T ss_pred ---cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC---------------CEEEEEeC--CCcEEEEEE
Confidence 667788999999999999775 455554 7999999998543 34555543 568999999
Q ss_pred cCCCCeEEEE--eCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 292 CHLTDLIATA--CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 292 ~~~~~~l~~~--~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+|++++++++ +.||.|++|++.+++ . .......+|...|.+++|+|++++|+.+.
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~-------~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSG-------L-TKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTE-------E-EEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCcc-------c-eeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 9999999995 489999999998864 0 11222458999999999999999987654
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.1e-33 Score=266.62 Aligned_cols=265 Identities=13% Similarity=0.164 Sum_probs=212.9
Q ss_pred ceEEEeecCCcEEEecCCCCCCcee-eeEEeccccCCcEEEEEECCC----C---CEEEEEECCCeEEEEECCCCeE---
Q psy14815 56 TSLRQLVEDKNIRLWGKESFGNKFT-AKAILSDGHQRTIRETAWSPC----G---NFIASASFDATTAVWDKRSGQF--- 124 (479)
Q Consensus 56 ~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~~~----~---~~l~t~~~dg~i~iwd~~~~~~--- 124 (479)
..+++++.|+.+++|++........ .......+|...|.+++|+|+ + .+|++++.||.|++||+.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 6788999999999999986431110 112223589999999999999 9 9999999999999999987751
Q ss_pred EEeEEEeCC-----CCcEEEEEEc----CCCCE-EEEEeCCCcEEEEEeCC------CCcee--eeeee-------eccc
Q psy14815 125 ECNATLEGH-----ENEVKSVTWS----KNGQF-LATCSRDKSVWVWEVGE------EDEYE--CAAVI-------NAHI 179 (479)
Q Consensus 125 ~~~~~~~~~-----~~~v~~l~~~----~~~~~-l~~~~~dg~i~vwd~~~------~~~~~--~~~~~-------~~~~ 179 (479)
.....+..| ...|.+++|+ |++++ |++++.||.|++||++. .+... ....+ ..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 115677778 5899999999 99999 99999999999999988 43222 11144 4478
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---C---CccEEEEEEccCCCEEEEeeCC---CeEE
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---H---TSTVWSLAFDRIGSRLATCSDD---ATVK 250 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~s~~~d---g~i~ 250 (479)
..+++++|+|++ ++++++.||.|++||++++. .+..+.. | ...|.+++|+|++++|++++.| +.|+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLR----PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 899999999999 99999999999999998754 3666777 8 9999999999999999999999 9999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEec-------------cccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-------------HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
+||++.. +++..+.+ | ...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 262 i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 324 (397)
T 1sq9_A 262 LYETEFG---------------ERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE- 324 (397)
T ss_dssp EEETTTC---------------CEEEEECBC--------CCBSB-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-
T ss_pred EEECCCC---------------cccceeccCccccccccccccc-CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-
Confidence 9998543 44566666 5 7899999999999999999999999999998876
Q ss_pred CCCceeeEEEecccc------cc---------------ccceeEEEecCCCCCCC
Q psy14815 318 DSDMVSFDLVHTEHR------AH---------------NQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~------~h---------------~~~v~~~~~sp~~~~l~ 351 (479)
++.. .. +| ..+|++++|+|++++++
T Consensus 325 --------~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 325 --------RITT-LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp --------EEEE-EECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred --------eeEE-EecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 2322 23 55 89999999999995433
No 104
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.1e-32 Score=249.67 Aligned_cols=249 Identities=19% Similarity=0.334 Sum_probs=207.1
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|...|++++|+|++++|++|+.||+|++||+++++.+..+
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~------------------------------------ 105 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------------------------------ 105 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE------------------------------------
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe------------------------------------
Confidence 34578899999999999999999999999999999887765443
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...+.++.+ ++..+++++.++.+++|+..... .....+.+|...+.++.++++++++++++.||.|++||+++
T Consensus 106 -~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 -TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp -ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -cCccceEEEeec--CCCEEEEEecCCceEeeecCCCc-eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 467777776655 56799999999999999998765 35677889999999999999999999999999999999987
Q ss_pred CCce-eeeeeeeccccceeEEEEecCCCEE---EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 166 EDEY-ECAAVINAHIQDVKKVRFHPFDNIL---ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 166 ~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l---~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
++.. ........+...|.++.++|++..+ ++++.++.|++||.+.... .....+...+..+.|+++++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceE
Confidence 6422 2344556678889999999976433 3566789999999987653 23345677899999999999887
Q ss_pred Eee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 242 TCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 242 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+++ .|+.|++||++. ++++.++.+| ...|++++|+|++++|++|+.||+|+|||+...
T Consensus 257 ~~sg~~d~~i~iwd~~~---------------~~~~~~l~gH-~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPT---------------MAKVAELKGH-TSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTTCCEEEEETTT---------------CCEEEEECCC-SSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 655 799999999843 3667889997 889999999999999999999999999998754
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-33 Score=268.94 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=201.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecc---cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMV---IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
+|.+.|++++|+|++++|++|+.||+|++||++ +++....+..+ .+ ....
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-------------~i--------------~~~~ 161 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-------------CI--------------RKIN 161 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-------------EE--------------EEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc-------------ee--------------EEEE
Confidence 699999999999999999999999999999985 44333222100 01 1111
Q ss_pred ccc--cCCcEEEEE--ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 86 SDG--HQRTIRETA--WSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 86 ~~~--~~~~v~~v~--~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
... +...+.++. +++++.++++|+.|+.|++||+++++ ....+.. |...|.+++|+|++++|++|+.||.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 239 (437)
T 3gre_A 162 LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIID 239 (437)
T ss_dssp GGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 112 677888888 66899999999999999999999987 5666776 889999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeee-ccccceeEEEEec----CCCEEEEEEcCCcEEEEecCCcccceEeee---------------
Q psy14815 160 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHP----FDNILASASYDDTVKLFKEDKAEADWINFA--------------- 219 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------- 219 (479)
+||++.. ..+..+. .|..+|++++|+| ++.+|++|+.||.|++||++++........
T Consensus 240 iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T 3gre_A 240 IWDIRFN---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK 316 (437)
T ss_dssp EEETTTT---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS
T ss_pred EEEcCCc---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccc
Confidence 9999986 5555554 6778999996654 678999999999999999987653111100
Q ss_pred -----eecC--CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC-Cc--------------------
Q psy14815 220 -----TLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SV-------------------- 271 (479)
Q Consensus 220 -----~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~-------------------- 271 (479)
.+.+ |...|++++|+ ++++|++|+.|+.|++||+..+.....+...... ..
T Consensus 317 ~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (437)
T 3gre_A 317 GLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRT 395 (437)
T ss_dssp SGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC--
T ss_pred ccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccc
Confidence 1122 77789999999 7789999999999999999776544332221100 00
Q ss_pred -eEEEEEEeccccccEEEEEecCC--CCeEEEEeCCCeEEEcc
Q psy14815 272 -WKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFK 311 (479)
Q Consensus 272 -~~~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~dg~i~vw~ 311 (479)
.........| ...|++++|+++ +.+|++|+.||.|+||+
T Consensus 396 ~~~~~~~~~~h-~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 396 STHSVDDSLYH-HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCccccc-ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0011112224 789999999998 77999999999999995
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-32 Score=255.90 Aligned_cols=270 Identities=13% Similarity=0.067 Sum_probs=201.2
Q ss_pred ECCCCCeEEEeeCCCcEEEEecccccccccccCC-----CccceEEEeecCCcEEEecCCCCC-----CceeeeEEeccc
Q psy14815 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL-----PVETSLRQLVEDKNIRLWGKESFG-----NKFTAKAILSDG 88 (479)
Q Consensus 19 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~w~~~~~~-----~~~~~~~~~~~~ 88 (479)
+.+++++|++|+.||+|++||+.+++.+..+... ...+.+++++.|+++++|+..... ...........+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 3457889999999999999999988766544311 111228899999999999876311 011112223346
Q ss_pred cCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 89 HQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 89 ~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
|...|.+++|+| +++++++++.||+|++||+++++. .... ..+...+.+++|+|++.+|++|+.||.|++||+++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 778999999999 999999999999999999999873 3333 34556899999999999999999999999999998
Q ss_pred CCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE--EEEEccCCCEEEE
Q psy14815 166 EDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW--SLAFDRIGSRLAT 242 (479)
Q Consensus 166 ~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~s 242 (479)
++.. ...+.. |..+|++++|+|++.+|++++ ++.|++||+++.... ..+..+..|...+. +++|+|++++|++
T Consensus 202 ~~~~--~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 202 PDQA--SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp TTSC--CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCC--ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEE
Confidence 7422 145566 999999999999999999999 559999999987641 11222222334443 6999999999999
Q ss_pred eeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC---CCCeEEEEeCCCeEEEcccCC
Q psy14815 243 CSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 243 ~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++. |+.|++|++..... .|.. .++..++|.+ +.+.+++++.||.+.++-...
T Consensus 278 ~s~~d~~i~v~~~~~~~~-----------~~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTK-----------NWTK---------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EETTTTEEEEEEECTTTC-----------SEEE---------EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred ecCCCCcEEEEEEccccc-----------ceEe---------cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 998 99999999855432 1221 4677888988 888999999999999885443
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-31 Score=251.98 Aligned_cols=254 Identities=23% Similarity=0.386 Sum_probs=204.6
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vw 161 (479)
..+|.+.|++++|+|++++|++|+.||.|++||+.++. ......+.+|...|.+++|+| ++++|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 36899999999999999999999999999999998653 245677889999999999999 69999999999999999
Q ss_pred EeCCCCc------eeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEe-----e----eeecCC
Q psy14815 162 EVGEEDE------YECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWIN-----F----ATLKSH 224 (479)
Q Consensus 162 d~~~~~~------~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~----~~~~~~ 224 (479)
|++.... ......+..|...|.+++|+|+ +++|++++.||.|++||++++...... . .....|
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 9987532 2446677789999999999999 999999999999999999876531110 0 011257
Q ss_pred CccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----Ce
Q psy14815 225 TSTVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DL 297 (479)
Q Consensus 225 ~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~ 297 (479)
...+.+++|+|+ +.++++++.|+.+.+|+.... ....+..+.+| ...|++++|+|++ ++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-------------KLHVAAKLPGH-KSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-------------CEEEEEECCCC-CSCEEEEEECCCSSCSSEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-------------ceeeeeecCCC-CcceeEEEECCCCCCcceE
Confidence 889999999997 899999999999977775332 22446677776 8899999999998 89
Q ss_pred EEEEeCCCeEEEcccCCCCCCC-------------------------------------CceeeEEEeccccccccceeE
Q psy14815 298 IATACGDDAIRIFKENPEAGDS-------------------------------------DMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~h~~~v~~ 340 (479)
|++++.||.|++||+..+.... ......++ ....+|...|++
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~ 311 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELL-SEHDDHNGEVWS 311 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEE-EEECTTSSCEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEE-EEEecccccEEE
Confidence 9999999999999998752110 01112233 334689999999
Q ss_pred EEecCCCCCCCccc
Q psy14815 341 VAWNPVVPEPQKTN 354 (479)
Q Consensus 341 ~~~sp~~~~l~~~~ 354 (479)
++|+|++++|+.++
T Consensus 312 ~~~s~~~~~l~s~~ 325 (351)
T 3f3f_A 312 VSWNLTGTILSSAG 325 (351)
T ss_dssp EEECSSSCCEEEEE
T ss_pred EEEcCCCCEEEEec
Confidence 99999999997765
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.3e-32 Score=256.69 Aligned_cols=206 Identities=12% Similarity=0.080 Sum_probs=171.4
Q ss_pred ccccceEEEEECCCCCeEEEe--eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 9 GHQGRVWNVSWNPQGTMISSC--GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+...+.+++|||||++++++ +.|++|+|||+++++++..+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~------------------------------------- 173 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI------------------------------------- 173 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-------------------------------------
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-------------------------------------
Confidence 455678999999999998654 47899999999876654332
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWE 162 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~vwd 162 (479)
.|...|.+++|+|+|+++++++. +.+++|+..+++.........|...|.+++|+|+++.+++++.|+ .++.|+
T Consensus 174 -~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 174 -ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp -ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred -CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 46778999999999999999985 557777777776444455667888999999999999999999887 588899
Q ss_pred eCCCCc-eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee-ecCCCccEEEEEEccCCCEE
Q psy14815 163 VGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 163 ~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 240 (479)
+..... ......+..|..+|++++|+|+|++|++|+.|++|+|||+++++. +.. +.+|...|++++|+|||++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~----~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM----SKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEETTSSSSCEEEEEECTTSCEE
T ss_pred cccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE----EEEecCcccCCEEEEEECCCCCEE
Confidence 876532 123456778899999999999999999999999999999997653 555 57899999999999999999
Q ss_pred EEeeCCCeEEEEeccCC
Q psy14815 241 ATCSDDATVKIWKEYKP 257 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~ 257 (479)
++|+.|++|+|||+...
T Consensus 328 aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSEEEEEECCTT
T ss_pred EEEeCCCeEEEEEcCCC
Confidence 99999999999998543
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=243.21 Aligned_cols=253 Identities=20% Similarity=0.225 Sum_probs=212.1
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEe
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLE 131 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~ 131 (479)
+.+..+++++.|+.+++|++... ........|...|.+++|+|+++++++++.||.|++|++.... ......+.
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~ 101 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQ-----WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI 101 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSS-----EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC
T ss_pred cCCCEEEEEEcCCcEEEEECCCC-----EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh
Confidence 45667889999999999998631 1222235789999999999999999999999999999987642 12466778
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCC
Q psy14815 132 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 132 ~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~ 210 (479)
.|...|.++.| +++++++++.||.|++|| .. .....+..|...+.+++|.| +++++++++.||.|++||..
T Consensus 102 ~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~- 173 (313)
T 3odt_A 102 GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG---SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 173 (313)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT---EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-
T ss_pred hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC---cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-
Confidence 89999999999 577999999999999999 32 55667788999999999998 89999999999999999944
Q ss_pred cccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 211 AEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
.....+.. |...+.+++|+|++. +++++.||.|++||++.. +++..+.+| ..+|+++
T Consensus 174 -----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~---------------~~~~~~~~~-~~~i~~~ 231 (313)
T 3odt_A 174 -----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG---------------DVLRTYEGH-ESFVYCI 231 (313)
T ss_dssp -----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEE
T ss_pred -----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch---------------hhhhhhhcC-CceEEEE
Confidence 23445555 899999999999988 899999999999998543 456777776 7899999
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|+|++ .|++++.||.|++||+.+++ .......|..+|.+++|+|++++++
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKENGS----------LKQVITLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTTCC----------EEEEEECSSSCEEEEEECTTSCEEE
T ss_pred EEecCC-CEEEEecCCEEEEEECCCCc----------eeEEEeccCceEEEEEEccCCCEEE
Confidence 999999 68899999999999999987 3344467888999999999998653
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-31 Score=250.39 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=198.8
Q ss_pred ccccceEEEEECCC---CCeEEEeeCCCcEEEEeccccc-ccccccCC----------------CccceEEEeecCCcEE
Q psy14815 9 GHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWVMVIRE-PYEKLHGL----------------PVETSLRQLVEDKNIR 68 (479)
Q Consensus 9 ~h~~~V~~l~~s~~---~~~l~t~~~dg~v~iwd~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~i~ 68 (479)
+|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..+ +.+..+++++.++.++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 79999999999998 6999999999999999999887 55555443 3456788889999999
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEE----ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETA----WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 144 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~----~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~ 144 (479)
+||+................+...+.+++ |+|+++++++++.||.|++||+++++. .....|...|.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDR 219 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESC
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCC
Confidence 99998643222222111122245899998 788999999999999999999999863 33456888999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEEeCCCCceeeee--eeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccc----
Q psy14815 145 ---NGQFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEAD---- 214 (479)
Q Consensus 145 ---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~---- 214 (479)
++.++++++.||.|++||+++........ .+..|...|++++|+|+++ +|++++.||.|++||++.+...
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 99999999999999999998763322221 3348999999999999998 8999999999999999865422
Q ss_pred -----------eEeeeeecCCCccEEEEEEccCCCEEE-EeeCCCeEEEEeccCC
Q psy14815 215 -----------WINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKP 257 (479)
Q Consensus 215 -----------~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~ 257 (479)
...+..+..|...|++++|+|++++|+ +++.||.|++||+...
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 145677888999999999999999998 8999999999998543
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=261.57 Aligned_cols=303 Identities=14% Similarity=0.204 Sum_probs=204.5
Q ss_pred ccccccccc------------cceEEEEECCCC--CeEEEeeCCCcEEEEecccccccccccCCCc-cceEEEeecCCcE
Q psy14815 3 NSQTLKGHQ------------GRVWNVSWNPQG--TMISSCGEDKNIRLWVMVIREPYEKLHGLPV-ETSLRQLVEDKNI 67 (479)
Q Consensus 3 ~~~~l~~h~------------~~V~~l~~s~~~--~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~i 67 (479)
+..++++|. +.|++++|+|++ .+|++++.||+|++||+.+++.......... ...+.....-..+
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 366788998 889999999998 7999999999999999987554321111000 0000000000000
Q ss_pred EEecCCC--CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE-------EEeCCCCcEE
Q psy14815 68 RLWGKES--FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA-------TLEGHENEVK 138 (479)
Q Consensus 68 ~~w~~~~--~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~ 138 (479)
.+-.... .............+|...|.+++|+|++++|++| .|+.|++||+++... ... .+.+|...|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEE
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceE
Confidence 0000000 0000111223346899999999999999999998 799999999985431 222 2567999999
Q ss_pred EEEEcCCC-CEEEEEeCCCcEEEEEeCCCCce-eeeeeeecccc------------ceeEEEEecCCCEEEEEEcCCcEE
Q psy14815 139 SVTWSKNG-QFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQ------------DVKKVRFHPFDNILASASYDDTVK 204 (479)
Q Consensus 139 ~l~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~------------~v~~l~~~~~~~~l~~~~~dg~i~ 204 (479)
+++|+|++ ++|++|+.||.|++||+++.... .....+..|.. .|++++|+|++++|++++. +.|+
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 99999998 99999999999999999987421 11455666665 8999999999999999999 9999
Q ss_pred EEecCC-cccceEeeeeecCCCcc---------------EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC
Q psy14815 205 LFKEDK-AEADWINFATLKSHTST---------------VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268 (479)
Q Consensus 205 i~d~~~-~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 268 (479)
+||++. +. ++..+..|... +..++|+|++++|++|+.||.|++||+..............
T Consensus 310 iwd~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~ 385 (447)
T 3dw8_B 310 VWDLNMENR----PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASREN 385 (447)
T ss_dssp EEETTCCSS----CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTT
T ss_pred EEeCCCCcc----ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccc
Confidence 999986 33 35566666532 33489999999999999999999999876532110000000
Q ss_pred -----CCce-----------EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 269 -----DSVW-----------KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 269 -----~~~~-----------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.... .............|..++|+|++.+|++++.++ +++|..+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 386 NKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 0000 000000111245789999999999999998775 7787643
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1e-32 Score=263.90 Aligned_cols=252 Identities=12% Similarity=0.100 Sum_probs=172.2
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe---EEEeCCCCcEEEEEEcC--------CCCEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN---ATLEGHENEVKSVTWSK--------NGQFLATCSRDK 156 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~v~~l~~~~--------~~~~l~~~~~dg 156 (479)
.|........+++++.++++++.|++|++||.++++.... ..+.+|.+.|.+++|+| |+++|++|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4445555556666788999999999999999998864322 33578999999999997 788999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEe------------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN------------------ 217 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~------------------ 217 (479)
+|++||+++. .....+..|..++.+++|+|++ ++|++|+.||+|++||++++......
T Consensus 167 tv~~Wd~~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 167 TLIIWRLTDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEEEETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred eEEEEECCCC---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 9999999877 4555677888999999999987 58999999999999999876532111
Q ss_pred ---eeeecCCCccEEEEEEc-cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC----ceEEEEEEeccccccEEEE
Q psy14815 218 ---FATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS----VWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 218 ---~~~~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~l 289 (479)
.....+|...+.++.|+ ++++.|++++.|+++++||+........+....... ..........+ ...+. .
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 321 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF-PSLLG-A 321 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-CCSSC-C
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-Cccee-E
Confidence 11224677888999986 799999999999999999987654433322111000 00001111111 22233 3
Q ss_pred EecC--CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 290 SWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 290 ~~~~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|+| ++.++++|+.||.|++||+.+++ .......|..+|++++|||||++|+.+.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~----------~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKD----------SNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTT----------CCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCc----------EEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3443 34467788899999999999887 2223357888999999999999997764
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=276.47 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=209.7
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~vwd~ 163 (479)
..+|.+.|++++|+|++++|++|+.||.|++||+.++.......+.+|.+.|.+++|+++ +++|++|+.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 468999999999999999999999999999999987666678889999999999999987 999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR------ 235 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 235 (479)
+++. ......+..|...|++++|+|+ ++.+++|+.||.|++||++.... .....+..|...|.+++|+|
T Consensus 85 ~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 85 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp ETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--CCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCc-ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--cceeEeecCCCceEEEEecCcccccc
Confidence 9863 2356677889999999999999 99999999999999999987643 23445678999999999999
Q ss_pred -------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC---CCeEEEEeCCC
Q psy14815 236 -------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDD 305 (479)
Q Consensus 236 -------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~---~~~l~~~~~dg 305 (479)
+++++++|+.||.|++||++... ....+...+.+| ..+|++++|+|+ +++|++++.||
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-----------~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCc-----------ccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCC
Confidence 58999999999999999997643 234566777886 889999999999 89999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.|++||+..++.... ........|...|++++|+|++++++.+
T Consensus 230 ~I~iwd~~~~~~~~~-----~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 230 TCIIWTQDNEQGPWK-----KTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp CEEEEEESSSSSCCB-----CCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EEEEecCCCCCCcce-----eEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 999999988642110 1122234688999999999999988543
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-31 Score=257.84 Aligned_cols=252 Identities=19% Similarity=0.383 Sum_probs=202.2
Q ss_pred eccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCC--------CeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS--------GQFECNATLEGHENEVKSVTWSKNGQ-FLATCSR 154 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~ 154 (479)
....|...|++++|+|+ +.+|++++.||.|++||+.+ ++......+.+|...|.+++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34679999999999997 68999999999999999976 22346778889999999999999988 9999999
Q ss_pred CCcEEEEEeCCCCc----eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 155 DKSVWVWEVGEEDE----YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 155 dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
||.|++||+..... ......+..|...|.+++|+| ++.+|++++.||.|++||++.... ......+..|...|+
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-SKPSHTVDAHTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-SSCSEEEECCSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-CcceeEeecCCCCeE
Confidence 99999999987432 122456678999999999999 678999999999999999997631 123556678999999
Q ss_pred EEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeE
Q psy14815 230 SLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAI 307 (479)
Q Consensus 230 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i 307 (479)
+++|+|+++ .+++|+.||.|++||++.... ++..+..| ...|.+++|+|+++ +|++++.||.|
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--------------~~~~~~~h-~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKL--------------KLHSFESH-KDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTS--------------CSEEEECC-SSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--------------CeEEeecC-CCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 999999987 688999999999999976432 24566676 78999999999985 69999999999
Q ss_pred EEcccCCCCCCCCc-----eeeEEEeccccccccceeEEEecCCCC-CCCcc
Q psy14815 308 RIFKENPEAGDSDM-----VSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKT 353 (479)
Q Consensus 308 ~vw~~~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~ 353 (479)
++||+......... .... +.....+|...|++++|+|+++ +|+.+
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPE-LLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTT-EEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEEeCCCCccccCccccccCCcc-eEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 99999873211000 0001 3334468999999999999999 45433
No 115
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=6.1e-34 Score=246.72 Aligned_cols=117 Identities=19% Similarity=0.262 Sum_probs=111.0
Q ss_pred ccHHHHHHHHHHhCCCccCC-CCCcceeee-ccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAE-PWDNVGLLI-EPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVT 432 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~-~wd~~Gl~v-~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~ 432 (479)
|+..+++..+++++|..+++ +|||+|||+ |. ++|+++++++|+|++++++|+++|||+||+|||+|| |++++
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~~d~~GL~veG~----~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f-~~~~~- 74 (242)
T 2yyb_A 1 MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGK----RTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFW-GKPFP- 74 (242)
T ss_dssp CBHHHHHHHHHHHTTGGGCTTCSSCCEEEECCC----SBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCS-SCCCC-
T ss_pred CcHHHHHHHHHHhCCHhhhccCCCCCeEEEcCC----cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCc-Ccccc-
Confidence 35779999999999999999 999999999 43 689999999999999999999999999999999999 99999
Q ss_pred cCChhhHHHHHHHhcCceEEeccccccccCC-CccccCCCcCCCCC
Q psy14815 433 NDKWKERVVSTCLAHNIAVYSPHTTWDAIQE-GRTKKAPPEVQVPA 477 (479)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~-g~~~~~~~~~~~~~ 477 (479)
.+++++|++.+|++|||+|||+|||||++++ |+|++||++||+..
T Consensus 75 ~~~~~~~~i~~li~~~I~ly~~Ht~lD~~~~~G~n~~La~~Lgl~~ 120 (242)
T 2yyb_A 75 IVGHHKRRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVD 120 (242)
T ss_dssp SCHHHHHHHHHHHHTTCEEEECSHHHHHCTTTCHHHHHHHTTTCCS
T ss_pred cccHHHHHHHHHHHCCCeEEEeccHHhcCCCcCHHHHHHHHcCCCC
Confidence 7789999999999999999999999999999 99999999999863
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-31 Score=250.89 Aligned_cols=247 Identities=14% Similarity=0.080 Sum_probs=204.8
Q ss_pred cccccccccceEEEEECCCCC-eEEEeeCCCcEEEEec-ccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM-VIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+.+.+|...|++++|+|+++ +|++|+.||.|++||+ .+++. .
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~---------------------------------- 93 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-Q---------------------------------- 93 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-E----------------------------------
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-E----------------------------------
Confidence 455668999999999999999 9999999999999998 65542 1
Q ss_pred eEEeccc--cCCcEEEEEECCCCCEEEEEECCCeEEEEECCC---------CeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 82 KAILSDG--HQRTIRETAWSPCGNFIASASFDATTAVWDKRS---------GQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 82 ~~~~~~~--~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
...+ |...|.+++|+| +.++++++.|+.|++||+++ ++ .+..+. |...|.+++|++++ ++
T Consensus 94 ---~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 94 ---ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL--NSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp ---ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES--CSSSSS-SCCCEEEEEECSSE--EE
T ss_pred ---eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC--eeeEEe-eCCceEEEEecCCc--EE
Confidence 1245 899999999999 99999999999999999876 43 334444 88899999999887 99
Q ss_pred EEeCCCcEEEEEeCC-CCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCc--ccceEeeeeecCCCc
Q psy14815 151 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKA--EADWINFATLKSHTS 226 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~ 226 (479)
+++.|+.|++||++. ... ........|...+++++|+| +++++++++.||.|++|+++.. .........+..|..
T Consensus 165 ~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 999999999999998 432 22334456788999999999 9999999999999999999876 100123455566644
Q ss_pred ---------cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 227 ---------TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 227 ---------~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
.|.+++|+|++++|++++.||.|++||+.. .+++..+.+||..+|.+++ |++++
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~---------------~~~~~~~~~~h~~~v~~~~--~~~~~ 306 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT---------------RKKIKNFAKFNEDSVVKIA--CSDNI 306 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT---------------TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc---------------HhHhhhhhcccCCCceEec--CCCCe
Confidence 999999999999999999999999999843 3667788887688999999 99999
Q ss_pred EEEEeCCCe-EEEccc
Q psy14815 298 IATACGDDA-IRIFKE 312 (479)
Q Consensus 298 l~~~~~dg~-i~vw~~ 312 (479)
|++++.||. .+.|..
T Consensus 307 l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 307 LCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEEECTHHHHCSSS
T ss_pred EEEEecCCcccccccc
Confidence 999999999 777764
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-30 Score=253.50 Aligned_cols=252 Identities=12% Similarity=0.030 Sum_probs=201.3
Q ss_pred ccccccceEEEEECCCCCeE-EEeeCCCcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 7 LKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+|.+.|++++|+|++++| ++|+.||+|++||+. +++.+..+.
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~--------------------------------- 144 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK--------------------------------- 144 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE---------------------------------
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee---------------------------------
Confidence 44688899999999999996 899999999999987 555443321
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE--EeEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE--CNATLEGHENEVKSVTWSKN---GQFLATCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i 158 (479)
...|...|.+++|+|++++|++|+.+|.|++|++.+++.. ....+.+|...|.+++|+|+ +++|++|+.|+.|
T Consensus 145 --~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 145 --RFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp --EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred --cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 1256789999999999999999999999999999887532 22366779999999999999 9999999999999
Q ss_pred EEEEeCCCCceeeeee-eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec---------------
Q psy14815 159 WVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--------------- 222 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------- 222 (479)
++||+++.. .... +.+|...|++++|+ ++++|++++.|+.|++||+++++. +..+.
T Consensus 223 ~vwd~~~~~---~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 223 KISHYPQCF---IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN----LSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp EEEEESCTT---CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE----EEEEECHHHHGGGCCTTSBC
T ss_pred EEEECCCCc---eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE----eeeecchhhhhhhhhhcccc
Confidence 999998874 3333 56899999999999 999999999999999999997763 22222
Q ss_pred ----------CCCccEEEEEEccCCCEEEEee-CCCeEEEEec--cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 223 ----------SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKE--YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 223 ----------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
.....|.+++|+|++++|++++ .|+.|++|++ ... .....+..+..+ ..|.++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~------------~~l~~~~~~~~~--~~v~~~ 360 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK------------GDLALKQIITFP--YNVISL 360 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST------------TCEEEEEEEECS--SCEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC------------CceeeccEeccC--CceEEE
Confidence 2345799999999999999998 8999999998 222 223566777775 689999
Q ss_pred EecCCCCeEEEEeC------CCeEEEcccCCC
Q psy14815 290 SWCHLTDLIATACG------DDAIRIFKENPE 315 (479)
Q Consensus 290 ~~~~~~~~l~~~~~------dg~i~vw~~~~~ 315 (479)
+|+|++.++++++. +..|.+|.+...
T Consensus 361 ~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 361 SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99996544444443 456888877544
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=3e-31 Score=254.92 Aligned_cols=259 Identities=17% Similarity=0.254 Sum_probs=198.4
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEE-----------eCCCCcEEEEEEcC-CCCEEEEE
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATL-----------EGHENEVKSVTWSK-NGQFLATC 152 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~l~~~~-~~~~l~~~ 152 (479)
..+|.+.|++++|+| ++++|++|+.||.|++||+.+++....... .+|...|.+++|+| ++.+|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 367999999999999 999999999999999999988753222221 25899999999999 78899999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC---CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+.||.|++||+++. .....+. +...+.++.|+|.+ .++++++.+|.|++||++++.. ...+..|...|.
T Consensus 119 ~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~v~ 190 (408)
T 4a11_B 119 SFDKTLKVWDTNTL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC----SHILQGHRQEIL 190 (408)
T ss_dssp ETTSEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC----CEEECCCCSCEE
T ss_pred eCCCeEEEeeCCCC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce----eeeecCCCCcEE
Confidence 99999999999987 3333333 67789999999844 5999999999999999997664 667788999999
Q ss_pred EEEEccCCCE-EEEeeCCCeEEEEeccCCCCCCCCCCC-CCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 230 SLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTP-DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 230 ~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
+++|+|++++ +++++.||.|++||++........... .............. +...|.+++|+|++++|++++.||.|
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999984 889999999999999766422111100 00000001111233 37899999999999999999999999
Q ss_pred EEcccCCCCCCCCc--------------------------------------eeeEEEeccccccccceeEEEecCCCCC
Q psy14815 308 RIFKENPEAGDSDM--------------------------------------VSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 308 ~vw~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
++||+.+++..... ....++. .+.+|...|++++|+|++++
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT-MLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE-EECCCSSCEEEEEEETTTTE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee-eeccCCCeEEEEEEcCCCCE
Confidence 99999876521100 0011222 23579999999999999999
Q ss_pred CCccc
Q psy14815 350 PQKTN 354 (479)
Q Consensus 350 l~~~~ 354 (479)
|+.++
T Consensus 349 l~s~~ 353 (408)
T 4a11_B 349 LYSGS 353 (408)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 86654
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=1.9e-31 Score=255.07 Aligned_cols=244 Identities=11% Similarity=0.068 Sum_probs=167.9
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
+....+++++.+|++++.|++|+|||+.+++.... .......+|.+.|
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~--------------------------------~~~~~~~gH~~~v 139 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ--------------------------------HVLGGKSGHHNFV 139 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEE--------------------------------EEECTTTSCSSCE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCcccee--------------------------------eeecccCCCCCce
Confidence 33333444566788888899999998776543211 1111246899999
Q ss_pred EEEEECC--------CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEeC
Q psy14815 94 RETAWSP--------CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 94 ~~v~~~~--------~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd~~ 164 (479)
.+++|+| ++++|++|+.|++|+|||++++. ....+..|...|.+++|+|++ .+|++|+.||.|++||++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 9999997 78999999999999999998876 456666788999999999987 489999999999999998
Q ss_pred CCCceeee----------------------eeeeccccceeEEEEe-cCCCEEEEEEcCCcEEEEecCCcccceEeeeee
Q psy14815 165 EEDEYECA----------------------AVINAHIQDVKKVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 165 ~~~~~~~~----------------------~~~~~~~~~v~~l~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
+++..... ....+|...+.++.|+ |+++.|++++.|+++++||+..+.. ...+
T Consensus 218 t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~----~~~l 293 (393)
T 4gq1_A 218 LNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND----YNEI 293 (393)
T ss_dssp CCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------
T ss_pred CCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC----CceE
Confidence 76421111 1124577788999987 6999999999999999999986543 2223
Q ss_pred cCCCccEEEE------------------EEcc--CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 222 KSHTSTVWSL------------------AFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 222 ~~~~~~v~~~------------------~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
..|...+..+ .|+| ++.++++|+.||.|++||+..+.. ...+.+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---------------~~~~~~~ 358 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS---------------NSIPIQL 358 (393)
T ss_dssp ----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC---------------CEEEEEC
T ss_pred eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE---------------EEEecCC
Confidence 3333333332 2333 234567888999999999865533 2344555
Q ss_pred ccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..+|.+++|+|+|++||+++.+| +.+|.+
T Consensus 359 -~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 359 -GMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp -SSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred -CCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 67999999999999999998766 445544
No 120
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=99.97 E-value=7.9e-33 Score=240.85 Aligned_cols=117 Identities=19% Similarity=0.292 Sum_probs=107.8
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCc-ccccccCc
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIF-APLKRVTN 433 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~-~~~~~~~~ 433 (479)
|+..+++..+++++|+..+++|||+|||| ++.++|+++++++|+|++++++|+++|||+||+|||+|| +++++++.
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~d~~GL~v---~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~ 77 (247)
T 1nmo_A 1 MKNTELEQLINEKLNSAAISDYAPNGLQV---EGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRG 77 (247)
T ss_dssp CBHHHHHHHHHHHTTCTTSCCSSCCEEEE---CCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCCCCT
T ss_pred CcHHHHHHHHHHhCChhhhCCcCCCeeEE---CCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCccccc
Confidence 35679999999999977777999999999 334899999999999999999999999999999999999 88888764
Q ss_pred CChhhHHHHHHHhcCceEEeccccccccCC-CccccCCCcCCCC
Q psy14815 434 DKWKERVVSTCLAHNIAVYSPHTTWDAIQE-GRTKKAPPEVQVP 476 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~-g~~~~~~~~~~~~ 476 (479)
.++|++.+|++|||+|||+|||||++++ |+|++||++||+.
T Consensus 78 --~~~~~i~~li~~~I~ly~~HtnlD~~~~~G~n~~La~~Lgl~ 119 (247)
T 1nmo_A 78 --MKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGIT 119 (247)
T ss_dssp --HHHHHHHHHHHTTCEEEECCHHHHHCTTTSHHHHHHHHHTEE
T ss_pred --hHHHHHHHHHHCCCEEEEeeechhhCCCCCHHHHHHHHcCCC
Confidence 4789999999999999999999999999 9999999999975
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=9.6e-30 Score=246.95 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=214.8
Q ss_pred ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC
Q psy14815 54 VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 133 (479)
Q Consensus 54 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~ 133 (479)
++..+++++.|+.|++||...... .....+|...|.+++| ++++|++|+.||.|++||+.+++ ....+.+|
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h 212 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLEC-----KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--MLNTLIHH 212 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCE-----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--EEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeE-----EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--EEEEEcCC
Confidence 466788999999999999874221 2234689999999999 78899999999999999999987 67788899
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc
Q psy14815 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
...|.+++|+ +..+++|+.||.|++||+++.........+.+|...|.+++| +++++++|+.||.|++||++++..
T Consensus 213 ~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 213 CEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 9999999997 459999999999999999987655555778899999999999 588999999999999999997653
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
+..+.+|...|.++.|+ ++++++|+.||.|++||++.. +++..+.+| ...|.+++|
T Consensus 289 ----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~~~h-~~~v~~~~~-- 344 (435)
T 1p22_A 289 ----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---------------ACLRVLEGH-EELVRCIRF-- 344 (435)
T ss_dssp ----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEC--
T ss_pred ----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC---------------CEEEEEeCC-cCcEEEEEe--
Confidence 67788999999999995 689999999999999998543 567788886 789999999
Q ss_pred CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 294 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.+|++|+.||.|++||+..+..........++. ...+|.+.|.+++| ++.+|+.++
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR-TLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEE-EECCCSSCCCCEEE--CSSCEEECC
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchhee-eccCCCCCeEEEEe--CCCEEEEEe
Confidence 78899999999999999997654221111110222 23589999999999 677775543
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=7.9e-30 Score=241.39 Aligned_cols=251 Identities=18% Similarity=0.257 Sum_probs=201.7
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.+.
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~------------------------------------- 122 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ------------------------------------- 122 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-------------------------------------
Confidence 6788999999999999999999999999999999987655432
Q ss_pred eccccCCcEEEEEE--CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 85 LSDGHQRTIRETAW--SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~--~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
...|...|.+++| +|++.+|++++.||.|++||+++++ ....+..+. .+.++.+.+ ..+++++.++.+++|+
T Consensus 123 -~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 123 -IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN--PMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQ 196 (368)
T ss_dssp -EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS--CSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEE
T ss_pred -eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc--EEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEE
Confidence 1368899999999 8999999999999999999999886 556666554 566777764 5889999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCE----EEEEEcCCcEEEEecCCcccceEeeeeecCCCc------------
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDKAEADWINFATLKSHTS------------ 226 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------ 226 (479)
++..... .......+...+.++.+.++... +++++.||.|++||++.... ......+..|..
T Consensus 197 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
T 3mmy_A 197 LENQPSE-FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRSNGTNTSAPQDIY 274 (368)
T ss_dssp CSSSCEE-EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEEC----CCCEEEC
T ss_pred eccccch-hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeeccccccccccccc
Confidence 9876421 12222234455667777665544 99999999999999987632 122445566665
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
.|++++|+|++++|++++.||.|++||+.. .+++..+.+| ..+|.+++|+|++++|++++.|+.
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~---------------~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDA---------------RTKLKTSEQL-DQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTT---------------TEEEEECCCC-SSCEEEEEECTTSSCEEEEECCCS
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCC---------------CcEEEEecCC-CCCceEEEECCCCCeEEEEecccc
Confidence 799999999999999999999999999843 3667788876 789999999999999999999987
Q ss_pred EEEcccCCCC
Q psy14815 307 IRIFKENPEA 316 (479)
Q Consensus 307 i~vw~~~~~~ 316 (479)
.+.|++...+
T Consensus 339 ~~~~~~~~~~ 348 (368)
T 3mmy_A 339 SKGHEFYNPQ 348 (368)
T ss_dssp TTCGGGCCTT
T ss_pred cccccccCCC
Confidence 7777765443
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.9e-29 Score=226.35 Aligned_cols=272 Identities=14% Similarity=0.134 Sum_probs=172.9
Q ss_pred eEEEEECCCCC---eEEEeeCCCcEEEEecccc---cccccccCCCccceEEEeecC------------C--cEEEecCC
Q psy14815 14 VWNVSWNPQGT---MISSCGEDKNIRLWVMVIR---EPYEKLHGLPVETSLRQLVED------------K--NIRLWGKE 73 (479)
Q Consensus 14 V~~l~~s~~~~---~l~t~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~------------~--~i~~w~~~ 73 (479)
+.++-|-..|- .++++++. +|++|+..++ +.+.++..+...-.-+....| . .++..-..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55566654333 67788754 8999999888 556665554322111111111 0 11111111
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE--CCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcC---CCC
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS--FDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSK---NGQ 147 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~---~~~ 147 (479)
..+... .......+|...|..+ ++++++.+++ .|+.|++|++. +++ .+..+..|...++.++|++ ++.
T Consensus 121 pd~~~~-~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 121 SDDESE-KQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp -----C-CEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSC--EEEEEEECCCSSCEEEEEEEETSTT
T ss_pred CCcccc-ccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCc--eeeeeccCCCceeeEEeeccCCCCc
Confidence 000000 0111112333333332 3333333322 48899999984 465 4566677888888889988 779
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccc---cceeEEEEecCCCEE------------EEEEcCCcEEEEecCCcc
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHI---QDVKKVRFHPFDNIL------------ASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l------------~~~~~dg~i~i~d~~~~~ 212 (479)
.|++|+.|++|++||++++ +++..+.+|. ..+.+++|+|++.++ ++|+.|++|++||..++.
T Consensus 195 ~LaSgS~D~TIkIWDl~TG---k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTG---QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEEEETTSEEEEEETTTC---CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred eEEEecCCCcEEEEECCCC---cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 9999999999999999998 5556665543 367788999999876 567889999999998766
Q ss_pred cceEeeee-ecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 213 ADWINFAT-LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 213 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
........ ..+|...+.+..++ +..+++++.|++|+|||+. +++++.++.+|+...+.+++|
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~---------------tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLL---------------LGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETT---------------TCSEEEEECCC--CCCCEEEE
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECC---------------CCcEEEEecCCCCCeEEEEEE
Confidence 31111111 14666665555554 7899999999999999984 446788998885555667999
Q ss_pred cCCCCeEEEEeCCCeEEEccc
Q psy14815 292 CHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+|+|++|++|+.|++|+|||+
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999986
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.5e-29 Score=242.82 Aligned_cols=271 Identities=8% Similarity=-0.005 Sum_probs=213.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..+.+++|+|++.++++++.|++|++||+.+++....+.. ....+|..
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------------------------------~~~~~~~~ 170 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP--------------------------------EKYKKKLG 170 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC--------------------------------HHHHTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc--------------------------------ccccccCC
Confidence 4466999999888888888899999999987765432210 01247888
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 170 (479)
.|.+++|++++.++++++.|+.|++||+++++ ....+..|...+.+++|+|+++.+++++ .++.|++||++++ .
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~ 245 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---L 245 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---E
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---c
Confidence 99999999999999999999999999999886 5567778889999999999999886554 7999999999887 3
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEE--------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE-E
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASAS--------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-A 241 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 241 (479)
....+.. ...+.+++|+|+++.+++++ .||.|++||+++++. ... ..|...+.+++|+|+++.+ +
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~----~~~-~~~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL----IDT-IGPPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE----EEE-EEEEECEEEEEECSSTTEEEE
T ss_pred EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE----Eee-ccCCCCcceEEECCCCCEEEE
Confidence 4444444 34589999999999999988 488999999987653 222 2456688999999999765 6
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC---------------CCe
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---------------DDA 306 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---------------dg~ 306 (479)
+++.|+.|++||+... +.+..+.. ...+.+++|+|+++++++++. ||.
T Consensus 320 ~~~~~~~v~v~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEK---------------KVQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp EETTTTEEEEEETTTT---------------EEEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred EecCCCEEEEEECCCC---------------cEEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 6689999999998432 44455542 567999999999998888876 579
Q ss_pred EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 307 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 307 i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
|++||+.+++ ....+ .. ...+.+++|+|++++|+.+
T Consensus 383 v~~~d~~~~~---------~~~~~-~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 383 VYVIDTTTDT---------VKEFW-EA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EEEEETTTTE---------EEEEE-EC-SSSEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCc---------EEEEe-cC-CCCCceEEEcCCCCEEEEE
Confidence 9999998876 33332 22 4578999999999988644
No 125
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-29 Score=240.26 Aligned_cols=268 Identities=12% Similarity=0.164 Sum_probs=185.5
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccc--------cccccCCCccceEEEeecCCcEEEecCCCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP--------YEKLHGLPVETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
+++++|...|++++|+|+| .++++.+|+.+.... +..+...|++..+++++.++.+++|+.+.
T Consensus 46 ~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-- 116 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-- 116 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--
T ss_pred ceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--
Confidence 3445666666666666666 455666665442221 22223345556666666666666666431
Q ss_pred CceeeeEEeccccCC-----cEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-----EEeEEE----eCCCCcEEEEEE
Q psy14815 77 NKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFDATTAVWDKRSGQF-----ECNATL----EGHENEVKSVTW 142 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-----~~~~~~----~~~~~~v~~l~~ 142 (479)
.... .. |.. .|.+++|||||++|++|+.||+|++||+.++.. ..+..+ .+|...|.+++|
T Consensus 117 ----~l~~-l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw 190 (588)
T 2j04_A 117 ----MLTN-LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW 190 (588)
T ss_dssp ----EEEE-CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE
T ss_pred ----eeee-cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEE
Confidence 1111 23 443 599999999999999999999999999998742 134555 667789999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee
Q psy14815 143 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 143 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
+|+| +++++.|+.|++||+.+.........+ ..|...|.+++|+ ++.|++++ +++|++||+.++.. ....
T Consensus 191 SPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~----~~~~ 261 (588)
T 2j04_A 191 YEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI----SSLK 261 (588)
T ss_dssp ETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE----EEEE
T ss_pred cCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE----EEEE
Confidence 9999 888999999999999887532223445 4788899999999 68899887 69999999986552 1223
Q ss_pred cCCCccEEEEEE--ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC-----C-------CceEEEEEEeccccccEE
Q psy14815 222 KSHTSTVWSLAF--DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN-----D-------SVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 222 ~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~i~ 287 (479)
.+|...|.+++| +|++..+++++.||+ ++|....-. +..... + ..+..+..+.+ ...|+
T Consensus 262 ~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~----~spd~~l~a~~d~~v~lW~~~g~~l~~~~~--~~~I~ 334 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELH----VTADNIIAPYLEKKFKKWSTIWNEFNNYET--TLVIH 334 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEE----EECCCSSHHHHHHHHHHTTTTTTSSSSSCC--EEEEE
T ss_pred cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEE----ECCCceEEEEcCCEEEEEECCCCceeeecc--ceEEE
Confidence 379999999999 999999999999999 999974210 000000 0 00001112222 45699
Q ss_pred EEEecCCCCeEEEEeC
Q psy14815 288 DISWCHLTDLIATACG 303 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~ 303 (479)
+++|+|||+.+|+++.
T Consensus 335 ~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 335 GISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred EEEECCCCCEEEEEEe
Confidence 9999999999998874
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=237.27 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=179.5
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC---------CCe
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR---------SGQ 123 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~---------~~~ 123 (479)
.++..+++++.|+.|++||+.......... ...|.++.|+|+ +++++.|++|++|+.. +++
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT-------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE-------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe-------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 456778999999999999998533222211 456778888887 9999999999999765 333
Q ss_pred EEEeEEE-eCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEeCCCCceeeeeee-eccccceeEEEEecCCCEEEEEEc
Q psy14815 124 FECNATL-EGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 124 ~~~~~~~-~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
.+..+ ..|...|.+++|+| +++++++++.||.|++||+++++. .... ..+...+++++|+|++++|++|+.
T Consensus 116 --~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 116 --VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp --EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred --eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 12233 35778899999999 999999999999999999998743 3333 345567999999999999999999
Q ss_pred CCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (479)
||.|++||++++.. ....+.. |...|++++|+|++.+|++++ |+.|++||++.......+.. +
T Consensus 191 dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~------------~ 254 (343)
T 3lrv_A 191 DGILDVYNLSSPDQ---ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT------------Y 254 (343)
T ss_dssp TSCEEEEESSCTTS---CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC------------C
T ss_pred CCEEEEEECCCCCC---CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc------------c
Confidence 99999999998764 1145666 999999999999999999999 55999999987654332211 1
Q ss_pred eccccccE--EEEEecCCCCeEEEEeC-CCeEEEcccCCCC
Q psy14815 279 SGHHGRTI--YDISWCHLTDLIATACG-DDAIRIFKENPEA 316 (479)
Q Consensus 279 ~~~~~~~i--~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~ 316 (479)
..+ ...+ .+++|+|++++|++++. |+.+++|++....
T Consensus 255 ~~~-~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 255 TIP-EFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp BC------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ccc-cccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 111 1222 47999999999999998 9999999997654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=4.9e-28 Score=232.78 Aligned_cols=293 Identities=14% Similarity=0.151 Sum_probs=222.5
Q ss_pred cccceEEEEECCCCC-eEEEee----CCC----cEEEEec--cccccccc--ccCCC-----------------------
Q psy14815 10 HQGRVWNVSWNPQGT-MISSCG----EDK----NIRLWVM--VIREPYEK--LHGLP----------------------- 53 (479)
Q Consensus 10 h~~~V~~l~~s~~~~-~l~t~~----~dg----~v~iwd~--~~~~~~~~--~~~~~----------------------- 53 (479)
+...+....|++.|. ++++|+ .|| +|+|||+ .+++.+.. +..+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 335677788888775 566776 467 8999999 88876622 33221
Q ss_pred -ccceEEEeecC------CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCC---eEEEEECCCCe
Q psy14815 54 -VETSLRQLVED------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQ 123 (479)
Q Consensus 54 -~~~~~~~~~~~------~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg---~i~iwd~~~~~ 123 (479)
.+..++..+.+ +.|++||.+. ... ....+|...+.+++|+|+|++|++++.++ .|++||+.+++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g--~~~----~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDG--YNQ----FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTS--CSC----EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCC--CCC----EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 14456666554 7899999873 111 12246788999999999999999999885 99999999986
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCc--EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY- 199 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~- 199 (479)
. ..+..|...+.+++|+|||+.|+ +++.++. |++||+.+++ ...+..|...+.+++|+|+|+.|++++.
T Consensus 215 ~---~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 215 V---RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp E---EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred E---EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 3 34666788999999999999887 6666665 9999998763 2456677888999999999999998886
Q ss_pred CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEE
Q psy14815 200 DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKC 274 (479)
Q Consensus 200 dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~ 274 (479)
++ .|.+||+.++.. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.... .
T Consensus 288 ~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---------------~ 347 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---------------V 347 (415)
T ss_dssp TSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---------------E
T ss_pred CCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---------------E
Confidence 45 577778876552 3445567789999999999999888764 589999985432 1
Q ss_pred EEEEeccccccEEEEEecCCCCeEEEEeCCC---eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 275 VCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 275 ~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
..+..+ . .+.+++|+|+|++|++++.++ .|++||+..+. ...+ ..|.+.|.+++|+|...+
T Consensus 348 -~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----------~~~l-~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 348 -QVLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----------KARL-PATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp -EECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC----------EEEC-CCSSSEEEEEEECCCCCC
T ss_pred -EEecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc----------EEEe-eCCCCCCcCCcccccccc
Confidence 334443 3 789999999999999988877 79999998664 4443 578899999999997543
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.2e-27 Score=228.71 Aligned_cols=269 Identities=13% Similarity=0.113 Sum_probs=204.0
Q ss_pred cccccccccceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++.+|. .+.+++|+|++++| ++++.|++|++||+.+++.+..+
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~--------------------------------- 70 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV--------------------------------- 70 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---------------------------------
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---------------------------------
Confidence 45566665 58999999999977 67778999999999877654433
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~dg~i~v 160 (479)
.+...+.+++|+|++++++.++ .++.|++||+.+++ ....+.. ...+.+++|+|+++.+ ++++.++.|++
T Consensus 71 -----~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 71 -----PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT--VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp -----ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred -----ECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCe--EEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 1233899999999999886555 56999999999986 4445554 4578999999999977 67788999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEE-EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
||++++ +....+..+ ..+.+++|+|+++.+ ++++.++.|++||++++.. ...+. +...+.+++|+|++++
T Consensus 143 ~d~~~~---~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 143 INTVTK---AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV----IDTVK-VEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EETTTT---EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEE-CSSEEEEEEECTTSSE
T ss_pred EECCCC---cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE----EEEEe-cCCCccceEECCCCCE
Confidence 999887 444445444 456999999999877 5677889999999987653 33333 5567899999999999
Q ss_pred EEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-EEEeCCCeEEEcccCCC
Q psy14815 240 LATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPE 315 (479)
Q Consensus 240 l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~dg~i~vw~~~~~ 315 (479)
+++++ .++.|++||+... +.+..+..+ ..+.+++|+|+++++ ++++.|+.|++||+.++
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~---------------~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN---------------KITARIPVG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT---------------EEEEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEecCcCCCcEEEEECCCC---------------eEEEEEecC--CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 99888 6899999998433 456666664 357899999999977 66688999999999987
Q ss_pred CCCCCceeeEEEeccccccccce---eEEEecCCCCCC
Q psy14815 316 AGDSDMVSFDLVHTEHRAHNQDV---NCVAWNPVVPEP 350 (479)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~h~~~v---~~~~~sp~~~~l 350 (479)
+ +.. ....|..+. ..+.+.|++..+
T Consensus 277 ~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
T 1l0q_A 277 T---------ITA-TMAVGKNPYASGQFIGSIPVQPVY 304 (391)
T ss_dssp E---------EEE-EEECSSSEECCSSCEEECSSCCCC
T ss_pred c---------EEE-EEECCcCCCccceeeecccccccc
Confidence 6 222 223343332 235667766555
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.7e-28 Score=220.03 Aligned_cols=217 Identities=10% Similarity=0.091 Sum_probs=157.5
Q ss_pred ccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 11 QGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 11 ~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
...|++++|+|+ ++++++++.+ +++|++.+++.+.... ...++.|++|++...+.... ..
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~----------~g~d~~V~~~~~s~dG~~~~----s~ 174 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSG----------TLSDQQVEVMTFAEDGGGKE----NQ 174 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEES----------SSTTCEEEEEEECTTSCEEE----EE
T ss_pred ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecc----------cCCCCcEEEEEECCCCceee----ee
Confidence 346777777777 7788887744 7788875444322210 12589999999964332211 12
Q ss_pred cccCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC---CcEEEEEEcCCCCEE-----------
Q psy14815 87 DGHQRTIRETAWSP---CGNFIASASFDATTAVWDKRSGQFECNATLEGHE---NEVKSVTWSKNGQFL----------- 149 (479)
Q Consensus 87 ~~~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l----------- 149 (479)
..|...++.++|++ ++.+|++++.|++|+|||+++++ .+..+.+|. ..+.+++|+|+|.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 47888888999998 77999999999999999999997 667777643 367788999999876
Q ss_pred -EEEeCCCcEEEEEeCCCCceeeeeee-----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 150 -ATCSRDKSVWVWEVGEEDEYECAAVI-----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 150 -~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
++|+.|++|++||..+++ .+..+ .+|...+.+..++ +.++++|+.|++|+|||+.+++. +.++.+
T Consensus 253 laSGs~D~tIklWd~~tgk---~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~----l~tL~g 323 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTL---SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC----TALLPP 323 (356)
T ss_dssp -----CCEEEEEEETTTTE---EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE----EEEECC
T ss_pred eeccCCCcEEEEEECCCCE---EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE----EEEecC
Confidence 567889999999998874 33222 3555444444444 78899999999999999998764 778888
Q ss_pred CCccEE-EEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 224 HTSTVW-SLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 224 ~~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|...+. +++|+|+|++|++|+.|++|+|||+
T Consensus 324 H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 887655 5899999999999999999999995
No 130
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=5.7e-27 Score=224.05 Aligned_cols=250 Identities=11% Similarity=0.081 Sum_probs=193.4
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN 103 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 103 (479)
.++++++.|++|++||+.+++.+..+ . +...+.+++|+|+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~-------------------------------------~-~~~~~~~~~~s~dg~ 44 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATI-------------------------------------P-VGSNPMGAVISPDGT 44 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE-------------------------------------E-CSSSEEEEEECTTSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEe-------------------------------------e-cCCCcceEEECCCCC
Confidence 46788889999999998876654433 2 234589999999999
Q ss_pred EE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccc
Q psy14815 104 FI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 104 ~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
++ ++++.|+.|++||+.+++ ....+..+. .+.+++|+|+++++++++ .++.|++||+.++ +....+.. ...
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~~--~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~-~~~ 117 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATNN--VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVKT-GKS 117 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTTE--EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEEC-SSS
T ss_pred EEEEECCCCCeEEEEECCCCe--EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEEeC-CCC
Confidence 77 667789999999999987 445555444 899999999999876554 6799999999987 34444443 456
Q ss_pred eeEEEEecCCCEE-EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE-EEeeCCCeEEEEeccCCCC
Q psy14815 182 VKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 182 v~~l~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~ 259 (479)
+.+++|+|+++.+ ++++.++.|++||+.+++. ...+..+ ..+.+++|+|+++++ ++++.++.|++||++..
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-- 190 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-- 190 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--
Confidence 8999999999877 6777899999999987653 4444444 456999999999988 57778999999998543
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe---CCCeEEEcccCCCCCCCCceeeEEEecccccccc
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 336 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~ 336 (479)
++...+.. ...+.+++|+|++++|++++ .++.|++||+.+++ ++..+ ..|.
T Consensus 191 -------------~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~~-~~~~- 244 (391)
T 1l0q_A 191 -------------SVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITARI-PVGP- 244 (391)
T ss_dssp -------------EEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEEE-ECCS-
T ss_pred -------------eEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEEE-ecCC-
Confidence 44445543 45789999999999998888 68999999998876 33333 2333
Q ss_pred ceeEEEecCCCCCCC
Q psy14815 337 DVNCVAWNPVVPEPQ 351 (479)
Q Consensus 337 ~v~~~~~sp~~~~l~ 351 (479)
.+.+++|+|++++|.
T Consensus 245 ~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 245 DPAGIAVTPDGKKVY 259 (391)
T ss_dssp SEEEEEECTTSSEEE
T ss_pred CccEEEEccCCCEEE
Confidence 578999999999773
No 131
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=6.4e-27 Score=226.89 Aligned_cols=243 Identities=10% Similarity=0.076 Sum_probs=195.9
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|.+.|++++|+|+++++++++.|+.|++||+.+++.+..+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~------------------------------------ 207 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV------------------------------------ 207 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE------------------------------------
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE------------------------------------
Confidence 56689999999999999999999999999999998766554332
Q ss_pred ccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe--------CCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--------RDK 156 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--------~dg 156 (479)
..|...+.+++|+|+++++++++ .|+.|++||+++++ ....+.. ...+.+++|+|+++.+++++ .||
T Consensus 208 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 208 -DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL--EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp -ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE--EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred -cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc--EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 35778999999999999885554 79999999999886 4455554 45699999999999999988 488
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.|++||+++++ .... ..+...+.+++|+|+++. +++++.++.|++||+++++. ...+. +...+.+++|+|
T Consensus 284 ~i~~~d~~~~~---~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~~-~~~~~~~~~~s~ 354 (433)
T 3bws_A 284 RLGIYSMDKEK---LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV----QKSIP-VFDKPNTIALSP 354 (433)
T ss_dssp EEEEEETTTTE---EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE----EEEEE-CSSSEEEEEECT
T ss_pred eEEEEECCCCc---EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE----EEEec-CCCCCCeEEEcC
Confidence 99999998873 3332 245567899999999975 46668899999999986553 33333 667899999999
Q ss_pred CCCEEEEeeC---------------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE
Q psy14815 236 IGSRLATCSD---------------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 236 ~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~ 300 (479)
+++++++++. ||.|++||+.. .+.+..+.. ...+.+++|+|++++|++
T Consensus 355 dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---------------~~~~~~~~~--~~~~~~~~~s~dg~~l~~ 417 (433)
T 3bws_A 355 DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---------------DTVKEFWEA--GNQPTGLDVSPDNRYLVI 417 (433)
T ss_dssp TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---------------TEEEEEEEC--SSSEEEEEECTTSCEEEE
T ss_pred CCCEEEEEecCCCccccccccccccceEEEEEECCC---------------CcEEEEecC--CCCCceEEEcCCCCEEEE
Confidence 9999988876 57999999843 355566665 457899999999999988
Q ss_pred EeC-CCeEEEcccCC
Q psy14815 301 ACG-DDAIRIFKENP 314 (479)
Q Consensus 301 ~~~-dg~i~vw~~~~ 314 (479)
++. |+.|++|+++.
T Consensus 418 ~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 418 SDFLDHQIRVYRRDG 432 (433)
T ss_dssp EETTTTEEEEEEETT
T ss_pred EECCCCeEEEEEecC
Confidence 875 99999999863
No 132
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-26 Score=218.28 Aligned_cols=267 Identities=13% Similarity=0.153 Sum_probs=185.9
Q ss_pred CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEE
Q psy14815 51 GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNAT 129 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~ 129 (479)
..+++..++++.. ..+++|+.+... ... ..+...+..+++.++++.+ ++++.|++|++||+.+++ .+..
T Consensus 27 fs~dg~~la~g~~-~~~~iw~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~--~~~~ 96 (355)
T 3vu4_A 27 FNQDQSCLILSTL-KSFEIYNVHPVA------HIM-SQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ--DVSR 96 (355)
T ss_dssp ECTTSSEEEEECS-SEEEEEEETTEE------EEE-EEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE--EEEE
T ss_pred ECCCCCEEEEEcC-CEEEEEecCCcc------eee-eeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc--EEEE
Confidence 3455666665554 458899977321 111 1122357888899888877 567778999999999997 4555
Q ss_pred EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC-CceeeeeeeeccccceeEEEEecCCCEEEE--EEcCCcEEEE
Q psy14815 130 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILAS--ASYDDTVKLF 206 (479)
Q Consensus 130 ~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~--~~~dg~i~i~ 206 (479)
+. +...|.++.|+++. ++++ .++.|++||+.+. +... .+.. +...+++++ +++++ |+.+|.|++|
T Consensus 97 ~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~---~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRIT---DDIR---FGGVCEFSN--GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSS---CCEE---EEEEEEEET--TEEEEEESSCTTCEEEE
T ss_pred EE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeE---Eecc---CCceEEEEc--cEEEEeCCCcCcEEEEE
Confidence 55 56789999998763 4444 4789999999886 3222 2222 344566776 56665 5889999999
Q ss_pred ecCCccc-----------ceEe-eeeecCCCccEEEEEEccCCCEEEEeeCCCe-EEEEeccCCCCCCCCCCCCCCCceE
Q psy14815 207 KEDKAEA-----------DWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVWK 273 (479)
Q Consensus 207 d~~~~~~-----------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~ 273 (479)
|++++.. ...+ +..+.+|...|++++|+|++++|++|+.|++ |++||++. ++
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~---------------~~ 229 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED---------------GV 229 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT---------------CC
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC---------------Cc
Confidence 9986541 0012 5678899999999999999999999999998 99999853 35
Q ss_pred EEEEEe-ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee---e---------E-EEecccccccccee
Q psy14815 274 CVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS---F---------D-LVHTEHRAHNQDVN 339 (479)
Q Consensus 274 ~~~~~~-~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~---------~-~~~~~~~~h~~~v~ 339 (479)
++.++. +.|...|++++|+|++++|++++.|++|++||+........... + . ....+...+..+..
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 677887 53488999999999999999999999999999977542111000 0 0 00011112233446
Q ss_pred EEEecCCCCCCCccc
Q psy14815 340 CVAWNPVVPEPQKTN 354 (479)
Q Consensus 340 ~~~~sp~~~~l~~~~ 354 (479)
.++|+|+++.|+.+.
T Consensus 310 ~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 310 KIAWISESSLVVVWP 324 (355)
T ss_dssp EEEESSSSEEEEEET
T ss_pred EEEEeCCCCEEEEEe
Confidence 789999988876664
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=6.6e-25 Score=217.42 Aligned_cols=309 Identities=11% Similarity=0.073 Sum_probs=225.6
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccccccccccc---------CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 18 SWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 18 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|+|++.++++++.|++|.+||..+++.+..+. ..+++..+++.+.++.|.+||+...... .... ..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--~~~~--i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--KVAE--IK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--EEEE--EE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCc--EEEE--Ee
Confidence 388999999999999999999999988877665 2356778888888999999999311111 1111 12
Q ss_pred cCCcEEEEEECC----CCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeC----------C-CCcEEEEEEcCCCCE-EEE
Q psy14815 89 HQRTIRETAWSP----CGNFIASASF-DATTAVWDKRSGQFECNATLEG----------H-ENEVKSVTWSKNGQF-LAT 151 (479)
Q Consensus 89 ~~~~v~~v~~~~----~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~----------~-~~~v~~l~~~~~~~~-l~~ 151 (479)
+...+..++|+| +|+++++++. +++|.+||..+++. +..+.. | ...+.++.++|++.. +++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 456789999999 9999999985 89999999998873 444433 2 237899999997664 556
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeec----CCCc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLK----SHTS 226 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~----~~~~ 226 (479)
...++.|.+||..+.+... ...+ .+...+..+.|+|+++++++++ .+++|.+||..+++. ...+. .|.+
T Consensus 298 ~~~~g~i~vvd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l----~~~i~~g~~ph~g 371 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL----SALVDVGKTPHPG 371 (543)
T ss_dssp ETTTTEEEEEECTTSSSCE-EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE----EEEEECSSSBCCT
T ss_pred ECCCCeEEEEEecCCCcce-eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE----EEeeccCCCCCCC
Confidence 6678999999998764332 1222 3456688999999999876655 588999999997764 33333 2554
Q ss_pred cEEEEEEccC-CCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--
Q psy14815 227 TVWSLAFDRI-GSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-- 302 (479)
Q Consensus 227 ~v~~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-- 302 (479)
....+ ++|+ +..++++. .|++|.+||+...... ...++++.++.++ ...+..++|+|++++|++++
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--------~~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--------QYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTT
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc--------hhcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCC
Confidence 44333 4677 55566665 5899999998653211 2347889999987 67788999999999999987
Q ss_pred -----CCCeEEEcccCCCCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCcc
Q psy14815 303 -----GDDAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 303 -----~dg~i~vw~~~~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+++|.|||+.+.+.. ++.+.. -+..+...+..++|+|+|+.|..+
T Consensus 442 ~~~~~~~~~v~v~d~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 442 NPDARISQSVAVFDLKNLDAK-----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp CSSHHHHTCEEEEETTCTTSC-----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred CCCcccCceEEEEECCCCCCC-----eEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 2779999999988721 111100 013456789999999999988654
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=4.5e-25 Score=228.80 Aligned_cols=303 Identities=12% Similarity=0.054 Sum_probs=213.7
Q ss_pred ccceEEEEECCCCCeEEEeeC-CC-----cEEEEecccccccccc----------------------------------c
Q psy14815 11 QGRVWNVSWNPQGTMISSCGE-DK-----NIRLWVMVIREPYEKL----------------------------------H 50 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~-dg-----~v~iwd~~~~~~~~~~----------------------------------~ 50 (479)
...|++++|||||++|++++. |+ +|++||+.+++....+ .
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 8999999887653322 1
Q ss_pred CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE
Q psy14815 51 GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 130 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 130 (479)
..+++..++.... +.+.+|++...... .......+...+.+++|+|||++|++++. +.|++||+.+++.. ...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~---~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~--~~~ 188 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKA---AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM--QLT 188 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTT---SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE--ECC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcc---eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE--Eec
Confidence 2345555665554 89999999853100 11123456788999999999999999884 69999999988633 222
Q ss_pred eCCCCc----------------EEEEEEcCCCCEEEEEeCCC---------------------------------cEEEE
Q psy14815 131 EGHENE----------------VKSVTWSKNGQFLATCSRDK---------------------------------SVWVW 161 (479)
Q Consensus 131 ~~~~~~----------------v~~l~~~~~~~~l~~~~~dg---------------------------------~i~vw 161 (479)
..+... +.++.|+|||++|++++.|+ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 222222 47899999999999998765 78889
Q ss_pred EeCC-CCceeeeeeeeccccceeEEEEecCCCEEEEEEc-----CCcEEEEecCCcccceEeeeeecCCCc----cEEEE
Q psy14815 162 EVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDKAEADWINFATLKSHTS----TVWSL 231 (479)
Q Consensus 162 d~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~----~v~~~ 231 (479)
|+.+ ++.. .+.....|...+..++| |+|+.|++++. +..|++||+.+++. ...+..+.. .+..+
T Consensus 269 d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 269 SPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ----RVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp CSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE----EEEEEEECSSCCCCCSCC
T ss_pred ECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce----EEEEEcCCCCcCCcCCce
Confidence 9887 6421 11111246778999999 99999998764 56799999987764 222222222 34678
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEE-EeCCC--eE
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIAT-ACGDD--AI 307 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~-~~~dg--~i 307 (479)
+|+|+|+++++++.||.++||.+.... . ...+..+ ...+..+ .|+|+++.|+. ++.++ .+
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~--------------~-~~~l~~~-~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKG--------------K-AAALTHG-NWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSS--------------C-EEESCCS-SSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCC--------------C-eeeeeec-ceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 999999999999999988888874221 2 3455554 5667777 59999987754 44455 89
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
++|++..... ....+ .. ...+.+++||||+++|+.
T Consensus 407 ~l~~~~~~g~--------~~~~l-~~-~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 407 QIYAVPLQGG--------QPQRL-SK-APGMHSASFARNASVYVD 441 (741)
T ss_dssp EEEEEETTCC--------CCEEC-CC-SCSEEEEEECTTSSEEEE
T ss_pred EEEEEEcCCC--------Ceeec-cc-CCCceEEEECCCCCEEEE
Confidence 9999865221 12222 12 456789999999998844
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=7.7e-25 Score=200.35 Aligned_cols=235 Identities=11% Similarity=0.088 Sum_probs=174.1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-CeEEEeEEEeCC-CCcEEEEEEcCCCCEEEEEe--CCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGH-ENEVKSVTWSKNGQFLATCS--RDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~--~dg~i~vwd~ 163 (479)
.|...|.+++|+|++++|++++ ++.|.+||+.+ ++. ......+ ...+.+++|+|++++|++++ .++...+|.+
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC--EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc--eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 4678999999999999999987 78999999998 763 3333444 36788999999999999998 4456666666
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+... .....+..+ ..+..++|+|+++.|+ +++.++.+++|+++.... ....+..+...+.+++|+|++++|+.
T Consensus 116 ~~~~--~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 116 PSTG--GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp ETTC--CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred ECCC--CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECCCCCEEEE
Confidence 4321 112233333 3488899999999877 778899999999754322 13456677888999999999998877
Q ss_pred ee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----------CeEEEc
Q psy14815 243 CS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----------DAIRIF 310 (479)
Q Consensus 243 ~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----------g~i~vw 310 (479)
++ .++.+++|++..... ....+..+ ...+..++|+|++++|++++.+ +.|++|
T Consensus 190 ~~~~~~~~~i~~~~~~~~--------------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGS--------------SVERITDS-AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EECTTSSCEEEEEETTSS--------------CEEECCCC-SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred EecCCCCccEEEECCCCC--------------CcEEEecC-CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 66 589999999853221 13444554 5688999999999999888776 569999
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+.+++. ..+. ...+|...+.+++|+|++++|+...
T Consensus 255 d~~~~~~-------~~~~-~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 255 DMDGGNV-------ETLF-DLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp ETTSCSC-------EEEE-EEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ecCCCCc-------eeee-ccCCCCcccccceECCCCCEEEEEE
Confidence 9988751 0111 1236778899999999999886543
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.9e-23 Score=195.61 Aligned_cols=283 Identities=11% Similarity=0.083 Sum_probs=190.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCC-CcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGED-KNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~d-g~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.|...+.+++|+|+|++|++++.+ +.|++|++. +++.. .....
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~----------------------------------~~~~~ 80 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT----------------------------------FAAES 80 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE----------------------------------EEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee----------------------------------ecccc
Confidence 467789999999999999888876 899999986 22211 00000
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWE 162 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd 162 (479)
.. ...+..++|+|+++++++++. ++.|.+||+..+.. .....+.. ...+.+++|+|+++++++++ .++.|.+||
T Consensus 81 -~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 81 -AL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp -EC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred -cc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 11 237789999999998877765 88999999954321 23344443 34688999999999888887 899999999
Q ss_pred eCCCCceeeee--eeec-cccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeee---ecC---CCccEEEEE
Q psy14815 163 VGEEDEYECAA--VINA-HIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFAT---LKS---HTSTVWSLA 232 (479)
Q Consensus 163 ~~~~~~~~~~~--~~~~-~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~---~~~---~~~~v~~~~ 232 (479)
+.......... .... ....+.+++|+|+++++++++ .++.|.+|+++........... +.. ....+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 98733222222 2222 334688999999999776655 7899999999642211121222 211 134677899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEEEc
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw 310 (479)
|+|++++|++ +..++.|.+||+.... ...+.+..+..+ . .+.+++|+|++++|++++ .++.|.+|
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~-----------~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDG-----------SVLSKEGFQPTE-T-QPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTS-----------CCEEEEEEEECS-S-SCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCC-----------CceEEeeeecCC-C-ccceEEECCCCCEEEEecCCCCeEEEE
Confidence 9999998874 4578999999985321 123445555543 3 388999999999888887 58999999
Q ss_pred ccC--CCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 311 KEN--PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 311 ~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+++ +++ +..+..+.. .....+++|.|+...+
T Consensus 305 ~~d~~~g~-------~~~~~~~~~--g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 305 EIVGEQGL-------LHEKGRYAV--GQGPMWVVVNAHEGGS 337 (343)
T ss_dssp EEETTTTE-------EEEEEEEEC--SSSCCEEEEEEEC---
T ss_pred EEcCCCce-------eeEcccccc--CCCCeeEEEEcccCCc
Confidence 665 432 112222211 2457788998876543
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2.6e-23 Score=195.63 Aligned_cols=272 Identities=8% Similarity=0.047 Sum_probs=197.4
Q ss_pred cccceEEEEECCCCCeEEEeeC-------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGE-------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-------------------------------- 86 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-------------------------------- 86 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--------------------------------
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--------------------------------
Confidence 3467889999999998888774 5679999987766544331
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCC---------cEEEEEEcCCCCEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHEN---------EVKSVTWSKNGQFLATC 152 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~v~~l~~~~~~~~l~~~ 152 (479)
....+..++|+|++++++++ ..++.|.+||..+++. ...+..+.. .+.++.|+|++++++++
T Consensus 87 ------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 158 (353)
T 3vgz_A 87 ------NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYIS 158 (353)
T ss_dssp ------ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEE
T ss_pred ------cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEE
Confidence 12346678999999866555 5579999999999873 344443322 27899999999988877
Q ss_pred e--CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 153 S--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 153 ~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+ .++.|.+||..+. +....+..+...+.+++|+|+++++++++.++.|.+||..+++..........++...+..
T Consensus 159 ~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 159 GIGKESVIWVVDGGNI---KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp EESSSCEEEEEETTTT---EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred ecCCCceEEEEcCCCC---ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 6 4788999999887 4444554455568899999999999999999999999998766421111111235667889
Q ss_pred EEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEE
Q psy14815 231 LAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIR 308 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~ 308 (479)
++|+|+++++++++. ++.|.+||.... +.+..+... . ...++|+|+++++++++ .++.|.
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~~-~--~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTRNG---------------NILAKVAAP-E--SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETTTC---------------CEEEEEECS-S--CCCEEEETTTTEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEEcC-C--CceEEECCCCCEEEEEECCCCeEE
Confidence 999999998776664 489999998443 334444433 1 25699999999665555 689999
Q ss_pred EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 309 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+||..+++ .+..+. ....+.+++|+||+++|...
T Consensus 298 ~~d~~~~~---------~~~~~~--~~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 298 VIDAKSYK---------VVKTFD--TPTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp EEETTTTE---------EEEEEE--CCSEEEEEEECTTSCEEEEE
T ss_pred EEECCCCe---------EEEEEe--cCCCCCeEEEcCCCCEEEEE
Confidence 99998876 333332 23467899999999977544
No 138
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.8e-23 Score=200.95 Aligned_cols=226 Identities=14% Similarity=0.142 Sum_probs=178.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCC---cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDK---NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
..+.+.+|...|.+++|+|||++|++++.++ .|++||+.+++...
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-------------------------------- 217 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-------------------------------- 217 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE--------------------------------
T ss_pred CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE--------------------------------
Confidence 3567788999999999999999999999875 89999987665421
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEE-EEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIA-SASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D 155 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~-t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d 155 (479)
...|...+.+++|+|+|++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|||+.|++++. +
T Consensus 218 ------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 218 ------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp ------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEEEEECTT
T ss_pred ------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCEEEEEECCC
Confidence 134667899999999999888 566555 499999998863 466678889999999999999988886 4
Q ss_pred C--cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 156 K--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 156 g--~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+ .|.+||+.+++ ...+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++. ..+..+. .+.+
T Consensus 289 g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~-~~~~ 358 (415)
T 2hqs_A 289 GRPQVYKVNINGGA----PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDET 358 (415)
T ss_dssp SSCEEEEEETTSSC----CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-----EECCCSS-SCEE
T ss_pred CCcEEEEEECCCCC----EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-----EEecCCC-CcCC
Confidence 5 57777887753 22344566778999999999999988864 5899999987653 3344454 8899
Q ss_pred EEEccCCCEEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 231 LAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
++|+|+|++|++++.++ .|++||+.. .....+..+ ...|.+++|+|...
T Consensus 359 ~~~spdg~~l~~~s~~~~~~~l~~~d~~g----------------~~~~~l~~~-~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQGMGSVLNLVSTDG----------------RFKARLPAT-DGQVKFPAWSPYLH 410 (415)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTS----------------CCEEECCCS-SSEEEEEEECCCCC
T ss_pred eEEcCCCCEEEEEEcCCCccEEEEEECCC----------------CcEEEeeCC-CCCCcCCccccccc
Confidence 99999999999888776 799999742 224566665 77999999999654
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.7e-23 Score=204.88 Aligned_cols=295 Identities=11% Similarity=0.098 Sum_probs=210.8
Q ss_pred cccccc-ccccceEEEEECCCCCeEEEeeCCCcEEEEec--ccccccccccC---------CC----ccceEEEee-cCC
Q psy14815 3 NSQTLK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVM--VIREPYEKLHG---------LP----VETSLRQLV-EDK 65 (479)
Q Consensus 3 ~~~~l~-~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~--~~~~~~~~~~~---------~~----~~~~~~~~~-~~~ 65 (479)
+++++. +|. +.+++|+|||++|++++.|++|++||+ .+++.+..+.. .+ ++..++++. .++
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 345666 443 899999999999999999999999999 77776665542 35 666666665 479
Q ss_pred cEEEecCCCCCCceeeeEEe--cc---cc-CCcEEEEEECCCCCE-EEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE
Q psy14815 66 NIRLWGKESFGNKFTAKAIL--SD---GH-QRTIRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVK 138 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~--~~---~~-~~~v~~v~~~~~~~~-l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 138 (479)
++.+||..+..........- .. .| ...+.++.++|++.. +++...++.|.+||+.+.+......+. +...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCcc
Confidence 99999987432211111000 00 02 237999999997654 566677899999999886533333444 566788
Q ss_pred EEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeec----cccceeEEEEecC-CCEEEEEE-cCCcEEEEecCCc
Q psy14815 139 SVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINA----HIQDVKKVRFHPF-DNILASAS-YDDTVKLFKEDKA 211 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~----~~~~v~~l~~~~~-~~~l~~~~-~dg~i~i~d~~~~ 211 (479)
++.|+|+++++++++ .+++|.+||..++ ++...+.. |......+ ++|+ +..++++. .|++|.+||..+.
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDR---RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCC---eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 999999999877665 5889999999987 34444432 44333333 4676 56666665 5799999999862
Q ss_pred c---cceEeeeeecCCCccEEEEEEccCCCEEEEee-------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE----
Q psy14815 212 E---ADWINFATLKSHTSTVWSLAFDRIGSRLATCS-------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT---- 277 (479)
Q Consensus 212 ~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---- 277 (479)
. ..++.+.++..|...+..++++|++++|++++ .+++|.+||+.+..... +.+..
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~-----------~~~~v~~~~ 472 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY-----------QVLPIAEWA 472 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCC-----------EEECHHHHH
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCe-----------EEeechhhc
Confidence 2 12567888999988889999999999999987 26799999997654321 11100
Q ss_pred -EeccccccEEEEEecCCCCeEEEEe-----CCCeEEEcccCCCC
Q psy14815 278 -LSGHHGRTIYDISWCHLTDLIATAC-----GDDAIRIFKENPEA 316 (479)
Q Consensus 278 -~~~~~~~~i~~l~~~~~~~~l~~~~-----~dg~i~vw~~~~~~ 316 (479)
+..+ ...+..++|+|+|+.+.++. .|+.|.|||.++++
T Consensus 473 ~~~~~-~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 473 DLGEG-AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCCSS-CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCCC-CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 1222 66899999999999888763 37999999999987
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.2e-24 Score=224.86 Aligned_cols=271 Identities=10% Similarity=0.079 Sum_probs=186.8
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..+.+++|+|||+++++ +.||+|++||+.+++....+ ..|..
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-------------------------------------~~~~~ 58 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-------------------------------------EGKKI 58 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-------------------------------------CTTTT
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-------------------------------------ccccc
Confidence 34788999999998876 68999999999887654332 22322
Q ss_pred ---cEEEEEECCCCCEEEEEECC---------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 92 ---TIRETAWSPCGNFIASASFD---------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 92 ---~v~~v~~~~~~~~l~t~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.|.+++|||||++|++++.+ +.+.+||+.+++...+.....|...+.+++|+|||+.|+.++. +.|+
T Consensus 59 ~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 59 ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 48999999999999999874 7888999999864333333345556889999999999999876 7999
Q ss_pred EEEeCCCCceeeeeeeeccccc------------------eeEEEEecCCCEEEEEEcCC--------------------
Q psy14815 160 VWEVGEEDEYECAAVINAHIQD------------------VKKVRFHPFDNILASASYDD-------------------- 201 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~------------------v~~l~~~~~~~~l~~~~~dg-------------------- 201 (479)
+||+.+++. ......+... +.+++|+|+|+.|++++.++
T Consensus 138 ~~~~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 138 YCAHVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp EESSSSSCC---EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred EEECCCCce---EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 999988643 2222222222 37899999999999987653
Q ss_pred --------------cEEEEecCCcccceEeeeeecC------CCccEEEEEEccCCCEEEEeeC----CCeEEEEeccCC
Q psy14815 202 --------------TVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKP 257 (479)
Q Consensus 202 --------------~i~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~ 257 (479)
.|++||+.+++. ...+.. +...+..++|+|||+++++.+. +..|++||+..+
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 789999987653 223333 3678999999999998876643 357999998443
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccE----EEEEecCCCCeEEE--EeCCC------eEEEccc-CCCCCCCCceee
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTI----YDISWCHLTDLIAT--ACGDD------AIRIFKE-NPEAGDSDMVSF 324 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~l~~~~~~~~l~~--~~~dg------~i~vw~~-~~~~~~~~~~~~ 324 (479)
++...+..++...+ ..++|+|||+.|+. +..++ .|++||. ..+...
T Consensus 291 ---------------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~------ 349 (723)
T 1xfd_A 291 ---------------VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND------ 349 (723)
T ss_dssp ---------------CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC------
T ss_pred ---------------cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc------
Confidence 22333333223333 37899999997775 44566 4666663 332200
Q ss_pred EEEecccccccccee-EEEecCCCCCCC
Q psy14815 325 DLVHTEHRAHNQDVN-CVAWNPVVPEPQ 351 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~-~~~~sp~~~~l~ 351 (479)
+...+. .+...+. .++|||||+.|+
T Consensus 350 -~~~~l~-~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 350 -NIQSIT-SGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp -CCCBSC-CSSSCEEEEEEEETTTTEEE
T ss_pred -ceeEee-cCCeEEEeeeEEcCCCCEEE
Confidence 011222 2223344 469999999884
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=9.9e-23 Score=190.68 Aligned_cols=245 Identities=12% Similarity=0.112 Sum_probs=170.3
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC-CeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD-ATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~ 163 (479)
.+...+.+++|+|++++|++++.+ +.|.+|++. +++...+..+..+. .+.+++|+|+++++++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 456788899999999999999887 999999997 66655556666544 7889999999998877765 788999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCC-cccceEeee--eec-CCCccEEEEEEccCCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK-AEADWINFA--TLK-SHTSTVWSLAFDRIGS 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~ 238 (479)
..+........+.. ...+.+++|+|+++++++++ .++.|.+||+.. +.. .... ... .....+..++|+|+++
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 114 EDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp ETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--eeecccccccCCCCCcceEEECCCCC
Confidence 63322233333333 34588999999999888887 899999999986 432 1111 222 2345788999999999
Q ss_pred EEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---cc--ccccEEEEEecCCCCeEEEE-eCCCeEEEcc
Q psy14815 239 RLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GH--HGRTIYDISWCHLTDLIATA-CGDDAIRIFK 311 (479)
Q Consensus 239 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~i~~l~~~~~~~~l~~~-~~dg~i~vw~ 311 (479)
++++++ .++.|.+|++..... ......... .. ....+..++|+|++++|+++ ..++.|++|+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d 259 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHG-----------NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFS 259 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTS-----------CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCC-----------cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEE
Confidence 776554 789999999853211 111122222 11 12357789999999887754 4789999999
Q ss_pred cCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 312 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+..... ....+... ..+. .+.+++|+|++++|....
T Consensus 260 ~~~~~~-----~~~~~~~~-~~~~-~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 260 VSEDGS-----VLSKEGFQ-PTET-QPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp ECTTSC-----CEEEEEEE-ECSS-SCCCEEECTTSSEEEEEC
T ss_pred EcCCCC-----ceEEeeee-cCCC-ccceEEECCCCCEEEEec
Confidence 984211 01122222 1223 388999999999775543
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=3e-23 Score=189.68 Aligned_cols=241 Identities=11% Similarity=0.088 Sum_probs=180.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+..|...|.+++|+|+|++|++++ ++.|.+||+.+ ++......
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~--------------------------------- 80 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT--------------------------------- 80 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC---------------------------------
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc---------------------------------
Confidence 34567899999999999999999987 78999999877 55432220
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEEC--C--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASF--D--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~--d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i 158 (479)
..+...+.+++|+|++++|++++. + ..|..|+..+++ ...+..+ ..+.+++|+|+++.|+ +++.++.+
T Consensus 81 ---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~ 153 (297)
T 2ojh_A 81 ---GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVF 153 (297)
T ss_dssp ---TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSS-SSEEEEEECTTSSEEEEEEEETTEE
T ss_pred ---ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecC-CCccceEECCCCCEEEEEECCCCce
Confidence 122467888999999999999993 3 355555556554 3344433 3589999999999877 77889999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
++|+++... .....+..+...+.+++|+|+++.|++++ .++.+++|+++.... ....+..|...+.+++|+|++
T Consensus 154 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 154 DIYSMDIDS--GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp EEEEEETTT--CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTS
T ss_pred EEEEEECCC--CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCC
Confidence 999975432 22344556778899999999999888766 589999999863222 245667788889999999999
Q ss_pred CEEEEeeCC-----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 238 SRLATCSDD-----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 238 ~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
++|++++.+ +.|++||+..... ..+..+.++ ...+.+++|+|++++|++++.+.
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-------------~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-------------ETLFDLFGG-QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-------------EEEEEEEES-TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCCCCc-------------eeeeccCCC-CcccccceECCCCCEEEEEEecc
Confidence 999888765 5699999854322 334444454 66889999999999998887764
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=2.5e-22 Score=188.57 Aligned_cols=256 Identities=11% Similarity=0.142 Sum_probs=175.3
Q ss_pred ccccceEEEEECCCCCeEEEeeC---CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGE---DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+...+..++|+|+|+ |++++. ++.|.+|++.+++... + ..
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~-~----------------------------------~~ 80 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK-L----------------------------------NT 80 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE-E----------------------------------EE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE-e----------------------------------ee
Confidence 4556778899999998 555443 6889999885443210 0 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECC-CCeEEEeEEEeCC---------CCcEEEEEEcCCCCEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKR-SGQFECNATLEGH---------ENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~-~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~l~~~~~ 154 (479)
...+...+..++|+|++++|++++ .++.|.+|++. ++....+..+... ...+.+++|+|+|+.+++...
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 123566788999999999998888 67999999995 4443344444321 234889999999996666666
Q ss_pred CCcEEEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEE-EEcCCcEEEEecCCcccceEeeeeecCCC------c
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHT------S 226 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------~ 226 (479)
++.|.+|++...........+.. .......++|+|+|+++++ +..++.|.+|+++...........+.... .
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 88999999984332232222222 2335778999999996666 45678999999875322222233332222 4
Q ss_pred cEEEEEEccCCCEE-EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-
Q psy14815 227 TVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 304 (479)
Q Consensus 227 ~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d- 304 (479)
.+..++|+|+|++| ++...++.|.+|++.... ....+..+..+ ...+..++|+|++++|++++.+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g------------~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG------------HLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGG------------CEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTT
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCC------------cEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCC
Confidence 58899999999987 455668999999985321 22445555554 5568899999999988888764
Q ss_pred CeEEEcccC
Q psy14815 305 DAIRIFKEN 313 (479)
Q Consensus 305 g~i~vw~~~ 313 (479)
+.|.+|+++
T Consensus 308 ~~v~v~~~d 316 (347)
T 3hfq_A 308 DNATLYARD 316 (347)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEEe
Confidence 899999554
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=3.8e-23 Score=221.72 Aligned_cols=303 Identities=10% Similarity=0.057 Sum_probs=218.9
Q ss_pred cccccccccce-------EEEEECCCCCeEEEeeCC------CcEEEEecccccccccccCC------------------
Q psy14815 4 SQTLKGHQGRV-------WNVSWNPQGTMISSCGED------KNIRLWVMVIREPYEKLHGL------------------ 52 (479)
Q Consensus 4 ~~~l~~h~~~V-------~~l~~s~~~~~l~t~~~d------g~v~iwd~~~~~~~~~~~~~------------------ 52 (479)
.+.|.+|...+ .+++|+|||+++++++.+ ..|.+|++.+++........
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 45678888888 999999999977777754 35777777665532111000
Q ss_pred -------------------C---------------------ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 53 -------------------P---------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 53 -------------------~---------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
+ .+..++....++...+|.++..+.... ....|. .
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~----~l~~~~-~ 246 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLR----KHTSFT-D 246 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCE----ECCCCC-S
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcce----EecCCC-C
Confidence 0 011222334456777776553222111 112233 4
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-----------CCCcEEEEEEc-CCCCEEEEEeCCCcEEE
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-----------HENEVKSVTWS-KNGQFLATCSRDKSVWV 160 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~~~~~dg~i~v 160 (479)
+...+|+|+|+.++++. ++.|.+||+...+ +..+.. |...+.+++|+ |+|+.+++++ ++.+.+
T Consensus 247 ~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~ 321 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSK-GGSIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFI 321 (1045)
T ss_dssp SCEEEEEESSSCEEEEE-TTEEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEE
T ss_pred cceeeEcCCCCEEEEEe-CCEEEEecCCceE---eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEE
Confidence 56779999999999885 8999999995543 224443 23468999999 9999999887 789999
Q ss_pred EEeCCCCceeeeeeeecccc-ceeEEEEecCCCEEEEEEcCCcEE-EEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASYDDTVK-LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|++..+. ...+..|.. .+..++|+ +++.|++++.++.+. +||...+.. ..+..|...+..++|+|+|+
T Consensus 322 ~~~~~~~----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-----~~l~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 322 QDVSGTY----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-----EKFEENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp ECTTSSB----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-----EECCCCCCSEEEEEECTTSS
T ss_pred EcCCCCc----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-----eEecCCccceeeeEECCCCC
Confidence 9988753 223455666 89999999 999999999888888 899886542 33447788999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC----------eEE
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----------AIR 308 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg----------~i~ 308 (479)
+|++++.++.|++||+..+ +......+| ...+.+++|+|||++|++++.++ .|+
T Consensus 392 ~la~~~~~~~v~~~d~~tg---------------~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETG---------------KPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred EEEEECCCCeEEEEECCCC---------------ceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 9999999999999998543 334444454 67889999999999999887654 899
Q ss_pred EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 309 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+||+.+++ ...+ ..|...+.+++|+|||++|+..
T Consensus 456 l~d~~~g~----------~~~l-~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 456 VYDMEGRK----------IFAA-TTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEETTTTE----------EEEC-SCSSSBEEEEEECTTSCEEEEE
T ss_pred EEECCCCc----------EEEe-eCCCcccCCceEcCCCCEEEEE
Confidence 99998864 3333 4677788899999999988543
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=2.1e-23 Score=215.12 Aligned_cols=294 Identities=10% Similarity=0.074 Sum_probs=198.0
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEeccccccc-cc---------------------------ccCCCccceEEEeecCC
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-EK---------------------------LHGLPVETSLRQLVEDK 65 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-~~---------------------------~~~~~~~~~~~~~~~~~ 65 (479)
+..+.|+ |+.+++++.|+ | +||+.+++.+ .. +...++ ..+ ..+.++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~-~~~~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLV-VLFTQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEE-EEEETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeE-EEEECC
Confidence 5557777 66777777788 8 9999988772 11 111233 333 334569
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-----CeEEEeEEEeCCCCc----
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----GQFECNATLEGHENE---- 136 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~---- 136 (479)
.+.+||+... .. .....+...+.+++|+|||++|+++ .++.|++||+.+ ++.. .....+...
T Consensus 102 ~i~~~d~~~~--~~----~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g 172 (706)
T 2z3z_A 102 GLVGFDMLAR--KV----TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYG 172 (706)
T ss_dssp EEEEEETTTT--EE----EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEES
T ss_pred EEEEEECCCC--ce----EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcc
Confidence 9999998742 11 1123456778899999999999996 579999999988 7532 222222222
Q ss_pred ----------EEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEEeCCCCceeeee
Q psy14815 137 ----------VKSVTWSKNGQFLATCS---------------------------------RDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 137 ----------v~~l~~~~~~~~l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~ 173 (479)
+.++.|+|||++|++++ .+..|.+||+.+++. ..+.
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~ 251 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQ 251 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-Eeec
Confidence 47999999999999987 346799999987632 1122
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecCCC---ccEEEEEEcc--CCCEEEEe
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHT---STVWSLAFDR--IGSRLATC 243 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~~l~s~ 243 (479)
....|...+.+++|+|+|+.|++++.++ .|++||..++... ..+.. ..+. ..+.+++|+| +|++++++
T Consensus 252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEE-EECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEE-ccCCCeECccCCceeecCCCCEEEEEE
Confidence 2224667799999999999999988776 8999999877321 11111 1122 2246789999 99999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE-EEecCCCCeEEEEeCC-C----eEEEcccCCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGD-D----AIRIFKENPEAG 317 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~l~~~~~d-g----~i~vw~~~~~~~ 317 (479)
+.|+.+++|++.... ..+..+..+ ...+.+ ++|+|+++.|+.++.+ + .|..|+..+++
T Consensus 330 ~~~g~~~l~~~~~~~--------------~~~~~l~~~-~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~- 393 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTG--------------RLIRQVTKG-EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK- 393 (706)
T ss_dssp CTTSSCEEEEEETTS--------------CEEEECCCS-SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-
T ss_pred ccCCccEEEEEECCC--------------CEEEecCCC-CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-
Confidence 999999999875221 234555554 556766 8999999977665554 4 56666666654
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
...+ .|...+.+++|||||++++.
T Consensus 394 ---------~~~l--~~~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 394 ---------TKDL--TPESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp ---------CEES--CCSSSEEEEEECTTSSEEEE
T ss_pred ---------ceec--cCCCceEEEEECCCCCEEEE
Confidence 2222 25667899999999998743
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.9e-22 Score=187.95 Aligned_cols=276 Identities=12% Similarity=0.026 Sum_probs=183.6
Q ss_pred EEECCCCCe-EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 17 VSWNPQGTM-ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 17 l~~s~~~~~-l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
..|.+++++ +++++.++.|.+||..+++....+ ..+...+ +
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~-------------------------------------~~~~~~~-~ 44 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQI-------------------------------------TLGYDFV-D 44 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEE-------------------------------------ECCCCEE-E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeE-------------------------------------EccCCcc-e
Confidence 345665554 677788999999998877654433 1234455 8
Q ss_pred EEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEEeCCCCceee
Q psy14815 96 TAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYEC 171 (479)
Q Consensus 96 v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~ 171 (479)
++|+|+++++++++. ++.|.+||+.+++. ....+..+..+..+++|+|++++++++..++ .|.+||+.+. +.
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~---~~ 120 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN---KF 120 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT---EE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC---Ce
Confidence 999999997777666 88999999998873 1445555666655599999999999665553 8999999887 33
Q ss_pred eeeeeccccceeEEEEecCCCEEEEE-EcCCc-EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCe
Q psy14815 172 AAVINAHIQDVKKVRFHPFDNILASA-SYDDT-VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDAT 248 (479)
Q Consensus 172 ~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~ 248 (479)
...+.. .....+++|+|+|++++++ ..++. |.+|++......................++|+|+|++++.+ ..++.
T Consensus 121 ~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 121 ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe
Confidence 444433 3446899999999865555 55588 99999985432111101222345568999999999966554 46899
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEEEcccCCCCCCCCceeeEE-
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDL- 326 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~- 326 (479)
|++||+...... ..+..+.. ...+..++|+|+|+++++++ .++.|.+||..+++.. ....
T Consensus 200 v~v~d~~~~~~~------------~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~----~~~~~ 261 (331)
T 3u4y_A 200 IGILETQNPENI------------TLLNAVGT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS----FVKSF 261 (331)
T ss_dssp EEEEECSSTTSC------------EEEEEEEC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----EEEEE
T ss_pred EEEEECCCCccc------------ceeeeccC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----eeccc
Confidence 999998654321 22344443 35678999999999776554 5788999999887610 0000
Q ss_pred Eec--cccccccceeEEEecCCCCCCCcc
Q psy14815 327 VHT--EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 327 ~~~--~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
... ...........++|+||+++|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEE
T ss_pred ccccccCCCCcccccceEECCCCCEEEEe
Confidence 111 101111223568999999987544
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=4.4e-22 Score=213.53 Aligned_cols=311 Identities=10% Similarity=0.027 Sum_probs=223.4
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc---------------------CC-CccceEEEee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------------------GL-PVETSLRQLV 62 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------------------~~-~~~~~~~~~~ 62 (479)
+.+.+|. .+...+|+|||++|+++. ++.|.+||+.... +..+. .. +++..++...
T Consensus 239 ~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 239 RKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp EECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred eEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 4455555 467789999999999884 8899999984332 22222 23 4555555554
Q ss_pred cCCcEEEecCCCCCCceeeeEEeccccCC-cEEEEEECCCCCEEEEEECCCeEE-EEECCCCeEEEeEEEeCCCCcEEEE
Q psy14815 63 EDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIASASFDATTA-VWDKRSGQFECNATLEGHENEVKSV 140 (479)
Q Consensus 63 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~t~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~v~~l 140 (479)
++.+.+|+.... . ......|.. .+..++|+ +++.+++++.++.+. +||+.+++.. .+..|...+.++
T Consensus 316 -~~~i~~~~~~~~--~----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~---~l~~~~~~~~~~ 384 (1045)
T 1k32_A 316 -RGQAFIQDVSGT--Y----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE---KFEENLGNVFAM 384 (1045)
T ss_dssp -TTEEEEECTTSS--B----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE---ECCCCCCSEEEE
T ss_pred -cCEEEEEcCCCC--c----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce---EecCCccceeee
Confidence 778899987732 1 112345666 89999999 999999999988899 9999887532 334777899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC----------cEEEEecCC
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----------TVKLFKEDK 210 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----------~i~i~d~~~ 210 (479)
+|+|||++|++++.++.|++||+.+++ .......|...+.+++|+|+|++|++++.++ .|++||+.+
T Consensus 385 ~~SpDG~~la~~~~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 385 GVDRNGKFAVVANDRFEIMTVDLETGK---PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EECCCCCEEEEECCCCeEEEEECCCCc---eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999999999999999999998873 3444557888899999999999999887654 899999986
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC-------------------CCC------
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG-------------------IPT------ 265 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------------------~~~------ 265 (479)
+. ...+..|...+..++|+|+|++|++++.++...+|+......... +..
T Consensus 462 g~-----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1045)
T 1k32_A 462 RK-----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 536 (1045)
T ss_dssp TE-----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred Cc-----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence 54 456677888899999999999999999888888887542211000 000
Q ss_pred ---CCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-------------EeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 266 ---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-------------ACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 266 ---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-------------~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
-........+..+..+ ...+..++++|+++++++ ......|++||+.+++ ...
T Consensus 537 ~~~~d~~g~~~~~~~l~~~-~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~----------~~~ 605 (1045)
T 1k32_A 537 AGEYDLNDMYKRSSPINVD-PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----------VTE 605 (1045)
T ss_dssp CCCCCCTTGGGGCEECSCC-CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC----------EEE
T ss_pred cccccccCHhHceEEcCCC-CCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCc----------EEE
Confidence 0000000112233333 567899999999987775 1224578888888876 222
Q ss_pred cccccccceeEEEecCCCCCCCc
Q psy14815 330 EHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 330 ~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+. ..+.+++|||||+.|+.
T Consensus 606 l~----~~v~~~~~S~DG~~l~~ 624 (1045)
T 1k32_A 606 VK----NNLTDLRLSADRKTVMV 624 (1045)
T ss_dssp EE----EEEEEEEECTTSCEEEE
T ss_pred ee----cCcceEEECCCCCEEEE
Confidence 21 56889999999998743
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.5e-22 Score=209.34 Aligned_cols=282 Identities=9% Similarity=0.049 Sum_probs=187.5
Q ss_pred cccccccc---ceEEEEECCCCCeEEEeeCC---------CcEEEEecccccccccccCCCccceEEEeecCCcEEEecC
Q psy14815 5 QTLKGHQG---RVWNVSWNPQGTMISSCGED---------KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 5 ~~l~~h~~---~V~~l~~s~~~~~l~t~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~ 72 (479)
+.+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. ..+.
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~---------------------- 107 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD---------------------- 107 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC----------------------
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Eecc----------------------
Confidence 44555654 49999999999999999865 6777888876654 1110
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc----------------
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE---------------- 136 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------------- 136 (479)
...+|...+..++|||||+.|++++. +.|++||+.+++.. .....+...
T Consensus 108 ------------~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 108 ------------PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ------------CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ------------CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEec
Confidence 01245556888999999999999986 79999999988632 333333332
Q ss_pred --EEEEEEcCCCCEEEEEeCCC----------------------------------cEEEEEeCCCCceeeeeeeec---
Q psy14815 137 --VKSVTWSKNGQFLATCSRDK----------------------------------SVWVWEVGEEDEYECAAVINA--- 177 (479)
Q Consensus 137 --v~~l~~~~~~~~l~~~~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~--- 177 (479)
+.+++|+|||+.|++++.++ .|++||+.+++. ...+..
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~ 249 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDD 249 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCC
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCcc
Confidence 37899999999999987653 799999987642 222332
Q ss_pred ---cccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeec-CCCccE----EEEEEccCCCEEEE--e
Q psy14815 178 ---HIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLK-SHTSTV----WSLAFDRIGSRLAT--C 243 (479)
Q Consensus 178 ---~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~-~~~~~v----~~~~~~~~~~~l~s--~ 243 (479)
+...+.+++|+|+|+++++.... ..|++||+.+++. ...+. .+...+ ..++|+|+|+.|+. +
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC----TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE----EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc----eEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 35678999999999988776543 5799999987663 12121 223333 37899999998775 4
Q ss_pred eCCC------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE-EEEecCCCCeEEEEeCC---CeEEEcccC
Q psy14815 244 SDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGD---DAIRIFKEN 313 (479)
Q Consensus 244 ~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~l~~~~~d---g~i~vw~~~ 313 (479)
..++ .|.+||........ +...+... ...+. .++|+|+++.|+..+.+ +.+++|++.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~------------~~~~l~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSND------------NIQSITSG-DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSC------------CCCBSCCS-SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cccCCCcceeEEEEEeccCCCCcc------------ceeEeecC-CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 4666 45666622222200 00112211 22344 36999999998766655 789999987
Q ss_pred CCCCCCCceeeEEEecccc--ccccceeEEEecCCCCCCC
Q psy14815 314 PEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~ 351 (479)
...... ...+.. .|...+..++|||||++|+
T Consensus 393 ~~~~~~-------~~~l~~~~~~~~~~~~~~~spdg~~l~ 425 (723)
T 1xfd_A 393 TVGNFN-------RQCLSCDLVENCTYFSASFSHSMDFFL 425 (723)
T ss_dssp SSTTCC-------CBCSSTTSSSSCCCCEEEECTTSSEEE
T ss_pred CCCCCC-------cceecccccCCCCeEEEEECCCCCEEE
Confidence 543100 111211 1567789999999999774
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=5.9e-22 Score=191.02 Aligned_cols=218 Identities=16% Similarity=0.108 Sum_probs=158.5
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
....++.+++++++.++++++.|+ +++|+............. . ..+. .........+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~--~---------~~~~-----------~~~~~~~~~~ 91 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDD--P---------NKIV-----------DKVQGLLVPM 91 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCC--T---------TCEE-----------ECCCCEEECC
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccC--c---------cccc-----------ccCccccccC
Confidence 345689999999999999999888 999986432111000000 0 0000 0000011245
Q ss_pred CCcEEEEEECCCCCEEE----EEECCCeEEEEECCCC--------e-EEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIA----SASFDATTAVWDKRSG--------Q-FECNATLEGHENEVKSVTWSKN-GQFLATCSRD 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~----t~~~dg~i~iwd~~~~--------~-~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~d 155 (479)
...|.+++|+|++++|+ +|+.|+.|++||+.++ + ......+.+|...|.+++|+|+ +.+|++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 77899999999999999 7888999999998654 1 1124456678999999999997 8899999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-------CCCccE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-------SHTSTV 228 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~v 228 (479)
|+|++||+++. ........|...|++++|+|+|++|++|+.||.|++||.+ +.. ...+. .|...|
T Consensus 172 g~v~iwD~~~~---~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~----~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 172 GSIAVLQVTET---VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE----KKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp SCEEEEEESSS---EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE----EEEECCCTTCCTTSCEEE
T ss_pred CeEEEEEcCCC---cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc----cccccCCcccCCCCceeE
Confidence 99999999987 3344556688899999999999999999999999999998 322 12222 234489
Q ss_pred EEEEEccCCCEEEEe-eCCC------eEEEEeccCCC
Q psy14815 229 WSLAFDRIGSRLATC-SDDA------TVKIWKEYKPG 258 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~-~~dg------~i~iwd~~~~~ 258 (479)
.++.|++++.++++. +.|| .+++|+++...
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 999999988777543 3443 38999997653
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=3.5e-21 Score=179.39 Aligned_cols=256 Identities=9% Similarity=0.070 Sum_probs=173.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC-CCcEEEEecccccc-cccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWVMVIREP-YEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------------- 79 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI--------------------------------- 79 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE---------------------------------
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec---------------------------------
Confidence 3444455666 9999999997766655 88999999876654 2211
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCC---eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCc-
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKS- 157 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~- 157 (479)
..+..+..+++|+|++++++++..++ .|.+||+.+++ .+..+.. .....+++|+|+|++++++ ..++.
T Consensus 80 ----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 80 ----QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK--FISTIPI-PYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp ----EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE--EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred ----ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC--eEEEEEC-CCCccceEECCCCCEEEEEecCCCce
Confidence 22344444599999999999555553 89999999987 3444543 3456899999999866555 45588
Q ss_pred EEEEEeCCCCceeee-eeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 158 VWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 158 i~vwd~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
+.+|++......... ............++|+|+++++++++ .++.|.+||+.+++. ...+..+. ....+..++|+|
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~-~~~~~~~~~~sp 230 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-ITLLNAVG-TNNLPGTIVVSR 230 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-CEEEEEEE-CSSCCCCEEECT
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-cceeeecc-CCCCCceEEECC
Confidence 999999865332111 11223345578999999999665554 688999999987653 11133333 335677899999
Q ss_pred CCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------ccccEEEEEecCCCCeEEEEeC-CCeE
Q psy14815 236 IGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACG-DDAI 307 (479)
Q Consensus 236 ~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~l~~~~~~~~l~~~~~-dg~i 307 (479)
+|++++.++ .++.|.+||+..... ..+..+..+ .......++|+|++++|++++. ++.|
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 297 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLSGTL-------------SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISREL 297 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTTTEE-------------EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEE
T ss_pred CCCEEEEEEcCCCEEEEEECCCCce-------------eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcE
Confidence 999776554 578899999854321 112222211 1122356899999998866655 5699
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
.+||+....
T Consensus 298 ~v~d~~~~~ 306 (331)
T 3u4y_A 298 KVFTISGKV 306 (331)
T ss_dssp EEEETTSCE
T ss_pred EEEEecCCc
Confidence 999998764
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=3.3e-21 Score=180.90 Aligned_cols=246 Identities=10% Similarity=0.063 Sum_probs=169.9
Q ss_pred ccCCcEEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~ 163 (479)
.+...+..++|+|+++ +++++. ++.|.+|++.+++...+..+..+...+..++|+|++++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456778899999998 555554 6899999998887656666566677889999999999998888 6789999999
Q ss_pred CCCCceeeeeeeec---------cccceeEEEEecCCCEEEEEEcCCcEEEEecC-CcccceEeeeeecC-CCccEEEEE
Q psy14815 164 GEEDEYECAAVINA---------HIQDVKKVRFHPFDNILASASYDDTVKLFKED-KAEADWINFATLKS-HTSTVWSLA 232 (479)
Q Consensus 164 ~~~~~~~~~~~~~~---------~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~-~~~~v~~~~ 232 (479)
........+..+.. ....+.+++|+|+++++++...++.|.+|++. .+.. ........ ....+..++
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL--SEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE--EEEEEEECCTTCCEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE--EEeeeEEcCCCCCCceEE
Confidence 75433333333321 12247889999999966666678899999998 3332 22222222 234678899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----cccEEEEEecCCCCeE-EEEeCCC
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLI-ATACGDD 305 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~l-~~~~~dg 305 (479)
|+|+|+++++ +..++.|.+|++.... .....+..+.... ...+..++|+|+|++| ++...++
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQT-----------GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCC-----------CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 9999997665 5578899999986421 1112233333221 1458899999999977 4556689
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|.+|++.... .+..+... ..+...+..++|+|||++|+...
T Consensus 263 ~v~v~~~~~~g------~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 263 TLAVFAVTADG------HLTLIQQI-STEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEECGGG------CEEEEEEE-ECSSSCCCEEEECTTSSEEEEEE
T ss_pred EEEEEEECCCC------cEEEeEEE-ecCCCCcCeEEECCCCCEEEEEE
Confidence 99999997431 11122222 34455688999999999886654
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=2.7e-20 Score=175.70 Aligned_cols=277 Identities=12% Similarity=0.103 Sum_probs=182.6
Q ss_pred cccceEEEEECCCCCeEEEeeCC----CcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGED----KNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~d----g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
|...+..++|+|+|++|++++.+ +.|.+|++... ..+..+ .
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~----------------------------------~ 93 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL----------------------------------N 93 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE----------------------------------E
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe----------------------------------e
Confidence 56677889999999999988875 78999987542 111110 0
Q ss_pred eccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCe-EEEeE---EEeC--------CCCcEEEEEEcCCCCEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQ-FECNA---TLEG--------HENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~-~~~~~---~~~~--------~~~~v~~l~~~~~~~~l~~ 151 (479)
....+......+++ +++++++++ .++.|.+|++.... ..... ...+ +...+.+++|+|+|+++++
T Consensus 94 ~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 94 TQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred EeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 01224456677777 788777776 57899999997532 11111 1111 1234588999999997766
Q ss_pred EeC-CCcEEEEEeCCCCc------eee----eeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccce-Eee
Q psy14815 152 CSR-DKSVWVWEVGEEDE------YEC----AAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW-INF 218 (479)
Q Consensus 152 ~~~-dg~i~vwd~~~~~~------~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~~~ 218 (479)
++. ++.|.+|++..... +.. .............++|+|+++++++++ .++.|.+||+.++.... ..+
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 654 78999999986532 211 111223345578999999999888777 68999999998554211 112
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeC--CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
.....+......++|+|+|++|+++.. ++.|.+|++.... .....+..+.. ...+..++|+|+|+
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-----------g~~~~~~~~~~--g~~~~~~~~spdg~ 318 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-----------GTLTKVGYQLT--GIHPRNFIITPNGK 318 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-----------CCEEEEEEEEC--SSCCCEEEECTTSC
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-----------CcEEEeeEecC--CCCCceEEECCCCC
Confidence 222334456789999999999877665 4899999985321 11233444443 45678999999999
Q ss_pred eEEEEe-CCCeEEEcccC--CCCCCCCceeeEEEeccccccccceeEEEec
Q psy14815 297 LIATAC-GDDAIRIFKEN--PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 344 (479)
Q Consensus 297 ~l~~~~-~dg~i~vw~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 344 (479)
+|++++ .++.|.+|+++ +++ +.......+...+.|+.|.
T Consensus 319 ~l~~~~~~~~~v~v~~~d~~~g~---------~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 319 YLLVACRDTNVIQIFERDQATGL---------LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTTCC---------EEECSCCEECSSEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEECCCCc---------EeecceeeeCCCCeEEEEc
Confidence 888887 57899997554 554 2222223355678899886
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=2.7e-22 Score=201.90 Aligned_cols=256 Identities=9% Similarity=0.020 Sum_probs=182.5
Q ss_pred cccceEEEEECCCCCeEEEeeC-CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGE-DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+..+|++++|+|||++||+++. ||+++||++.+++... + ...
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-l------------------------------------t~~ 62 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-L------------------------------------NRE 62 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-C------------------------------------CSS
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-e------------------------------------ecc
Confidence 3668999999999999999887 9999999975443221 1 122
Q ss_pred cCCcEEEEEECCCCCEEEEEEC---CCeEEEE--EC--CCCeEEEeEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASF---DATTAVW--DK--RSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWV 160 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~---dg~i~iw--d~--~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~v 160 (479)
+...+..++|+|| +.+++++. +....+| +. .... . .+... ..+...+|+|+++. +++.+.++.+.+
T Consensus 63 ~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l 136 (582)
T 3o4h_A 63 PINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-Q---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVAL 136 (582)
T ss_dssp CCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC-E---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEE
T ss_pred cccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc-c---cccCC-CCceeeeeCCCCCeEEEEecCCCCceE
Confidence 3368899999999 77777765 4545565 44 3332 1 23222 23456788888863 344445556669
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
||+.+++ ... +..+.. .+++|+|||++|++++.+ +.|++||+.+++. ..+..|...+..++|+||
T Consensus 137 ~d~~~g~---~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 137 YALDGGG---LRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-----RVFDSGEGSFSSASISPG 205 (582)
T ss_dssp EEEETTE---EEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-----EEECCSSCEEEEEEECTT
T ss_pred EEccCCc---EEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-----eEeecCCCccccceECCC
Confidence 9998863 222 222222 789999999999988877 7899999987663 456778888999999999
Q ss_pred CCEEEEeeCCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE--------ecCCCCeEEEEeCCCe
Q psy14815 237 GSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS--------WCHLTDLIATACGDDA 306 (479)
Q Consensus 237 ~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~--------~~~~~~~l~~~~~dg~ 306 (479)
|+.|+++..++ .|++||+.... .. .+.++ ...+..++ |+|||.++++++.|+.
T Consensus 206 G~~l~~~~~~~~~~i~~~d~~~~~---------------~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 206 MKVTAGLETAREARLVTVDPRDGS---------------VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp SCEEEEEECSSCEEEEEECTTTCC---------------EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred CCEEEEccCCCeeEEEEEcCCCCc---------------EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 99999888888 89999985432 22 33343 44555555 9999999999999999
Q ss_pred EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 307 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 307 i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+++|++ ++ +.. ...+.+.+++|+ +++.+..
T Consensus 269 ~~l~~~--g~---------~~~----~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 269 SAVFID--GE---------RVE----APQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EEEEET--TE---------EEC----CCSSEEEEEEEE-TTEEEEE
T ss_pred EEEEEE--CC---------eec----cCCCceEEEEec-CCEEEEE
Confidence 999999 44 222 233678899999 8887743
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=6.2e-21 Score=196.58 Aligned_cols=275 Identities=13% Similarity=0.107 Sum_probs=192.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---------cCCCccceEEEeecCCcEEEecCCC-----CCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---------HGLPVETSLRQLVEDKNIRLWGKES-----FGN 77 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~w~~~~-----~~~ 77 (479)
..|.+++|||| +.++.+. ++.|++||+.+++..... ...+++..++. ..++.|.+|++.. ...
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCc
Confidence 56999999999 6666554 599999999887654322 12355666666 5789999999985 221
Q ss_pred ceeeeEEeccccCC--------------cEEEEEECCCCCEEEEEE---------------------------------C
Q psy14815 78 KFTAKAILSDGHQR--------------TIRETAWSPCGNFIASAS---------------------------------F 110 (479)
Q Consensus 78 ~~~~~~~~~~~~~~--------------~v~~v~~~~~~~~l~t~~---------------------------------~ 110 (479)
. .. ...+.. .+.+++|+|||++|++++ .
T Consensus 159 ~----~~-~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 159 I----AV-TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp E----ES-CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred E----Ee-ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 1 11 112222 258999999999999998 4
Q ss_pred CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCCceeeeeeeecccc---ce
Q psy14815 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYECAAVINAHIQ---DV 182 (479)
Q Consensus 111 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~---~v 182 (479)
+..|.+||+.+++...+.....|...+.+++|+|||+.|++++.++ .|.+||+.+++....+.. ..+.. .+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECcc
Confidence 4689999999987433322235667899999999999999988776 899999988732222211 11221 24
Q ss_pred eEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE-EEEccCCCEEEEeeCC-C----eEEEEec
Q psy14815 183 KKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS-LAFDRIGSRLATCSDD-A----TVKIWKE 254 (479)
Q Consensus 183 ~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d-g----~i~iwd~ 254 (479)
.+++|+| +|+++++++.++.+++|+++... .....+..+...+.. ++|+|+++.|+.++.+ + .|..||+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~---~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG---RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTS---CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCC---CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 6789999 99999999999999999886222 134566677777877 7999999988665544 3 4555555
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC----CeEEEcccCCCC
Q psy14815 255 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENPEA 316 (479)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----g~i~vw~~~~~~ 316 (479)
.... ...+. + ...+.+++|+|++++++.++.+ +.|++||+.+++
T Consensus 390 ~~~~----------------~~~l~-~-~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KGGK----------------TKDLT-P-ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCCC----------------CEESC-C-SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCC----------------ceecc-C-CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3321 11222 2 4568899999999988876544 569999987754
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=6.3e-21 Score=177.88 Aligned_cols=259 Identities=8% Similarity=0.025 Sum_probs=184.3
Q ss_pred CeEEEeeCCCcEEEEecccccccccccC------------CCccceEE-EeecCCcEEEecCCCCCCceeeeEEeccc--
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHG------------LPVETSLR-QLVEDKNIRLWGKESFGNKFTAKAILSDG-- 88 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~------------~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~~~~~~~~-- 88 (479)
++|++++.+++|.+||..+++.+..+.. .+++..++ +...++.+.+||........ . .....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~--~-~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG--R-IDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEE--E-EECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEe--e-EEcCCcc
Confidence 4789999999999999988876655431 12333443 34456789999987432111 1 11111
Q ss_pred -cCCcEEEEEECCCCCEEEEEE------------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 89 -HQRTIRETAWSPCGNFIASAS------------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 89 -~~~~v~~v~~~~~~~~l~t~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
+...+.+++|+|+++++++++ .++.|.+||+.+++ ....+.. ...+.+++|+|++++++++ +
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFEA-PRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--EEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence 223677899999999998886 57999999999886 3344443 4467889999999988888 6
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC------------------------cEEEEecCCc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------------------------TVKLFKEDKA 211 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------------------------~i~i~d~~~~ 211 (479)
+.|.+||+.+++ ....+..+.. ...+.|+|+++.++..+..+ .|.+||..++
T Consensus 154 ~~i~~~d~~~~~---~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 154 RDLHVMDPEAGT---LVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp SSEEEEETTTTE---EEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred CeEEEEECCCCc---Eeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 899999998873 3333333220 11237889887665554332 4689999877
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
+.. ...+..+...+.+++|+|++++++++ ++.|.+||+... +.+..+.. ...+.+++|
T Consensus 230 ~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~ 287 (337)
T 1pby_B 230 EMA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN---------------ASIKRVPL--PHSYYSVNV 287 (337)
T ss_dssp CEE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT---------------EEEEEEEC--SSCCCEEEE
T ss_pred Cce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC---------------cCcceecC--CCceeeEEE
Confidence 642 33345566778899999999999888 789999998432 44455543 346789999
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|++++|++++.++.|++||+.+++
T Consensus 288 s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 288 STDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp CTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCCEEEEEcCCCcEEEEECcCCc
Confidence 9999999999999999999999886
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.6e-21 Score=188.06 Aligned_cols=205 Identities=10% Similarity=0.093 Sum_probs=156.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-----------eEE---EeEEEeCCCCcEEEEEEcCCCCEEE----E
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSG-----------QFE---CNATLEGHENEVKSVTWSKNGQFLA----T 151 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-----------~~~---~~~~~~~~~~~v~~l~~~~~~~~l~----~ 151 (479)
...++.+++++++.++++++.++ +++|+.... ... .... -.+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEec
Confidence 44688899999999999999887 888874210 000 0111 23567899999999999999 7
Q ss_pred EeCCCcEEEEEeCCC--------CceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 152 CSRDKSVWVWEVGEE--------DEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
|+.|+.|++||+++. +.......+.+|...|++++|+|+ +++|++++.||+|++||++++.. .....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~----~~~~~ 189 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK----VCATL 189 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----EEEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----eeecc
Confidence 888999999998754 222234566779999999999997 78999999999999999997642 44456
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------ccccEEEEEecCCCC
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTD 296 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~l~~~~~~~ 296 (479)
.|...|.+++|+|+|++|++|+.||.|++||.+ .. ....+..+ +...|.+++|++++.
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~---------------~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ---------------EKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC---------------EEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc---------------ccccccCCcccCCCCceeEEEEEEecCce
Confidence 688999999999999999999999999999985 21 12222222 134899999999888
Q ss_pred eEEEE-eCCC------eEEEcccCCCC
Q psy14815 297 LIATA-CGDD------AIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~-~~dg------~i~vw~~~~~~ 316 (479)
++++. +.|| .+++|++...+
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEEccCCCccCCCCceEEEEeccCC
Confidence 77553 3443 38999998754
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=6.2e-21 Score=178.94 Aligned_cols=236 Identities=8% Similarity=-0.022 Sum_probs=171.4
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 16 NVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
.++++++++++++++.+++|.+||..+++.+..+. .+....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~------------------------------------~~~~~~~~~ 47 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV------------------------------------MPDKFGPGT 47 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE------------------------------------CSSCCSSCE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe------------------------------------cCCCCCCce
Confidence 45778889999999999999999998776544331 111124678
Q ss_pred EEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCC------CCcEEEEEEcCCCCEEEEEeCC------------C
Q psy14815 96 TAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGH------ENEVKSVTWSKNGQFLATCSRD------------K 156 (479)
Q Consensus 96 v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~~~~~d------------g 156 (479)
++|+|++++++ ++..++.|.+||+.+++. ...+... ...+.+++|+|+|+++++++.+ +
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCC
Confidence 99999998665 445689999999999863 3334322 2237889999999999999865 8
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------------- 223 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------- 223 (479)
.|.+||+.+++.......... ...+.+++|+|+++ +++++ +.|.+||..+++.. ..+..
T Consensus 126 ~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 126 RLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYT----VALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp EEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEE----EEECSTTCCCTTBCCCBC
T ss_pred eEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCcee----ccccccccCCccccCccc
Confidence 999999987543333333333 34688999999999 55543 44999999876531 11111
Q ss_pred -------------------------------------------------------CCccEEEEEEcc-CCCEEEEeeCCC
Q psy14815 224 -------------------------------------------------------HTSTVWSLAFDR-IGSRLATCSDDA 247 (479)
Q Consensus 224 -------------------------------------------------------~~~~v~~~~~~~-~~~~l~s~~~dg 247 (479)
+...+..++|+| ++++++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~ 275 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN 275 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC
Confidence 112456778889 99999888 88
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|.+||+... +.+..+.. ...+.+++|+|++++|++++.++.|++||..+++
T Consensus 276 ~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 276 RLAKYDLKQR---------------KLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEEEEETTTT---------------EEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred eEEEEECccC---------------eEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 9999998433 44455543 3357799999999998888889999999998876
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.8e-20 Score=194.29 Aligned_cols=271 Identities=15% Similarity=0.144 Sum_probs=189.8
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccC----------CCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHG----------LPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.|.+++|||||++|++++. +.|.+||+.++. ....+.. .+++..++... ++.|.+|++... ..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g--~~- 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG--RQ- 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT--EE-
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC--CE-
Confidence 4889999999999999986 899999998872 2222222 24555555554 568999998742 11
Q ss_pred eeEEeccccCC----------------cEEEEEECCCCCEEEEEECCC--------------------------------
Q psy14815 81 AKAILSDGHQR----------------TIRETAWSPCGNFIASASFDA-------------------------------- 112 (479)
Q Consensus 81 ~~~~~~~~~~~----------------~v~~v~~~~~~~~l~t~~~dg-------------------------------- 112 (479)
. .....+.. .+.+++|+|||++|++++.|+
T Consensus 185 -~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 185 -M-QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp -E-ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred -E-EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 1 11122222 247899999999999998765
Q ss_pred -eEEEEECCC-CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEEEeCCCCceeeeeeeecccc----c
Q psy14815 113 -TTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGEEDEYECAAVINAHIQ----D 181 (479)
Q Consensus 113 -~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~----~ 181 (479)
.|.+||+.+ ++...+.....|...+.+++| |||+.|++++. +..|.+||+.+++ ....+..+.. .
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---QRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---EEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---eEEEEEcCCCCcCCc
Confidence 889999988 763322111246778999999 99999987764 5679999998874 3333333332 4
Q ss_pred eeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE-EEccCCCEEEE-eeCCC--eEEEEeccCC
Q psy14815 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL-AFDRIGSRLAT-CSDDA--TVKIWKEYKP 257 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s-~~~dg--~i~iwd~~~~ 257 (479)
+.+++|+|+|+++++++.+|.+++|.++.... ...+..+...+..+ .|+|+++.|+. ++.++ .+++|++...
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~----~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK----AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC----EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC----eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 56899999999999999999888887763221 45566778888887 59999998754 44555 8999998543
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC----CeEEEcccCC
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENP 314 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----g~i~vw~~~~ 314 (479)
... ...+.. ...+.+++|+|++++|+....+ ..+.+|+...
T Consensus 415 g~~--------------~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 415 GGQ--------------PQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp CCC--------------CEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred CCC--------------eeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 211 123333 3467899999999988776543 4688887643
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=4e-19 Score=167.65 Aligned_cols=244 Identities=16% Similarity=0.100 Sum_probs=165.6
Q ss_pred cCCcEEEEEECCCCCEEEEEECC----CeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD----ATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVW 161 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vw 161 (479)
+...+..++|+|++++|++++.+ +.|.+|++.. ++...+.....+......+++ +++++++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56677889999999999999886 7999998765 665556666656667788888 788777776 57899999
Q ss_pred EeCCCCceeeeeeeec-----------cccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc----c-eEe----eee
Q psy14815 162 EVGEEDEYECAAVINA-----------HIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA----D-WIN----FAT 220 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~----~-~~~----~~~ 220 (479)
++.............. +...+.+++|+|+++++++++ .++.|.+|++..... . ... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9976533222211111 122357899999999776665 478999999875431 1 111 111
Q ss_pred ecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCe
Q psy14815 221 LKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDL 297 (479)
Q Consensus 221 ~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~ 297 (479)
...+...+..++|+|+|+++++++ .++.|.+|++.... ...+..+... +......++|+|+|++
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-------------~~~~~~~~~~~~~~~~~~~i~~spdg~~ 272 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-------------LDEIQTVAADTVNAQGSGDIHLSPDGKY 272 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-------------EEEEEEEESCSSCCCCEEEEEECTTSSE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-------------eEEeEEEecCCCCCCCcccEEECCCCCE
Confidence 223455678999999999887777 68999999986321 1222333221 1345689999999998
Q ss_pred EEEEeCC--CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 298 IATACGD--DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 298 l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|++++.+ +.|.+|++...... +..+.... . ...+.+++|+|||++|+...
T Consensus 273 l~v~~~~~~~~i~v~~~~~~~g~-----~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 273 LYASNRLKADGVAIFKVDETNGT-----LTKVGYQL-T-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEECSSSCEEEEEEECTTTCC-----EEEEEEEE-C-SSCCCEEEECTTSCEEEEEE
T ss_pred EEEECCCCCCEEEEEEEcCCCCc-----EEEeeEec-C-CCCCceEEECCCCCEEEEEE
Confidence 8776654 89999999632211 11222221 2 45678999999999886654
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=1.5e-20 Score=179.14 Aligned_cols=279 Identities=12% Similarity=0.009 Sum_probs=184.5
Q ss_pred cccccccccceEE-----EEECCCCCeEEEeeC-CCc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 4 SQTLKGHQGRVWN-----VSWNPQGTMISSCGE-DKN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 4 ~~~l~~h~~~V~~-----l~~s~~~~~l~t~~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
+..|..|...... .+|+|||++|+.++. +|. |.+||+.+++.....
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------------------------- 76 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-------------------------- 76 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC--------------------------
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee--------------------------
Confidence 4556667666665 889999999999887 674 777777665543221
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEE--EcCCCCEEEEE-
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVT--WSKNGQFLATC- 152 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~--~~~~~~~l~~~- 152 (479)
.++...+..+.|+||++.|+.++.++.|++||+.+++... ....+...+.... ++++++.++..
T Consensus 77 -----------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 143 (388)
T 3pe7_A 77 -----------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV--VYQVPAEWVGYGTWVANSDCTKLVGIE 143 (388)
T ss_dssp -----------CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred -----------eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee--eeechhhcccccceeECCCCCeecccc
Confidence 2344444456799999999999999999999999987443 3344445454444 48899988743
Q ss_pred ---------------------eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcC------CcEE
Q psy14815 153 ---------------------SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVK 204 (479)
Q Consensus 153 ---------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~ 204 (479)
..+..|.+||+.+++. ..+..+...+..++|+| +++.|+....+ ..|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCce----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence 2346799999988632 23445566789999999 99988887753 3688
Q ss_pred EEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeC-C----CeEEEEeccCCCCCCCCCCCCCCCceEEEEE
Q psy14815 205 LFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSD-D----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
++|...... ..+..+. ..+..+.|+|+|+.|+..+. + ..|++||+..+.. +.+..
T Consensus 220 ~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~ 281 (388)
T 3pe7_A 220 LINEDGTNM-----RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------------RQLTS 281 (388)
T ss_dssp EEETTSCCC-----EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------------EEEEE
T ss_pred EEeCCCCce-----EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------------EEEEc
Confidence 888765442 2333333 35788999999998765443 2 2399999854421 22323
Q ss_pred Eeccc--cccEEEEEecCCCCeEEEE---------eCCCeEEEcccCCCCCCCCceeeEEEecccccccc----------
Q psy14815 278 LSGHH--GRTIYDISWCHLTDLIATA---------CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ---------- 336 (479)
Q Consensus 278 ~~~~~--~~~i~~l~~~~~~~~l~~~---------~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~---------- 336 (479)
+.++. ......+.|+|+|+.|+.. ..+..|++||+.+++ ...+ ..+..
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT----------QHRV-ARHDTSWKVFEGDRQ 350 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE----------EEEE-EECCCCCCCBTTBSS
T ss_pred CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc----------eEEe-ccccCcccccccccc
Confidence 32210 0001123799999988754 456789999998875 2222 23333
Q ss_pred -ceeEEEecCCCCCCCccc
Q psy14815 337 -DVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 337 -~v~~~~~sp~~~~l~~~~ 354 (479)
.+.+++|||||+.|+..+
T Consensus 351 ~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 351 VTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp TTCCCCEECTTSSEEEEEE
T ss_pred cCCCCccCCCCCCEEEEEe
Confidence 478899999999886543
No 161
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=3.4e-19 Score=167.38 Aligned_cols=239 Identities=8% Similarity=0.002 Sum_probs=171.2
Q ss_pred cceEEEEECCCCCeEEE-eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISS-CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+.+++|+|+|++++. ...++.|.+||..+++.+..+..... . . ......
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---------------------~---~----~~~~~~ 140 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDR---------------------K---R----TEEVRP 140 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCC---------------------C---C----CSSCCC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCC---------------------c---c----ccccCC
Confidence 45778899999985554 45578999999887776544321100 0 0 000111
Q ss_pred CcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
..+.+++|+|+++++++++ .++.|.+||..+++ ....+..+...+.+++|+|+++.+++++.++.|.+||+.+.+.
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGKESVIWVVDGGNIK--LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE--EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc--eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 2378899999999887776 47899999999986 4455554556688999999999999999999999999988743
Q ss_pred eeeeeeee----ccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 169 YECAAVIN----AHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 169 ~~~~~~~~----~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
...+. ++...+..++|+|+++++++++. ++.|.+||..+++. ...+.... ...++|+|++++++.+
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~~--~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 219 ---LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI----LAKVAAPE--SLAVLFNPARNEAYVT 289 (353)
T ss_dssp ---EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE----EEEEECSS--CCCEEEETTTTEEEEE
T ss_pred ---EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEEcCC--CceEEECCCCCEEEEE
Confidence 33332 24556788999999997777665 48999999987664 33333222 2568999999976655
Q ss_pred e-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 244 S-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 244 ~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
+ .++.|.+||.... +.+..+.. ...+.+++|+|++++|+++..++.
T Consensus 290 ~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 290 HRQAGKVSVIDAKSY---------------KVVKTFDT--PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp ETTTTEEEEEETTTT---------------EEEEEEEC--CSEEEEEEECTTSCEEEEEEECCC
T ss_pred ECCCCeEEEEECCCC---------------eEEEEEec--CCCCCeEEEcCCCCEEEEEEcccc
Confidence 5 6899999997433 44555554 347899999999998877766643
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=3e-19 Score=168.67 Aligned_cols=253 Identities=11% Similarity=0.090 Sum_probs=168.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecc-cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMV-IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+..++|+|+|++|++++.+ .|.+|++. +++..... .. ..+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~---------------------------------~~--~~~- 82 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA---------------------------------SH--PIG- 82 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE---------------------------------EE--ECC-
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee---------------------------------Ee--ecC-
Confidence 467889999999988888877 89999875 44322110 00 001
Q ss_pred CcEEEEEECCCCCE--EEEEE-------------CCCeEEEEECC-CCeEEEe-EEEe-CCCCcEEEEEEcCCCCEEEEE
Q psy14815 91 RTIRETAWSPCGNF--IASAS-------------FDATTAVWDKR-SGQFECN-ATLE-GHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 91 ~~v~~v~~~~~~~~--l~t~~-------------~dg~i~iwd~~-~~~~~~~-~~~~-~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..+.+++|+|+|++ ++++. .++.+.+|++. .++.... ..+. .+...+.+++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 12345889999984 44543 68999999997 4543221 1221 245679999999999988887
Q ss_pred eC-CCcEEEEEeC-CCCceeeeeeee--ccccceeEEEEecCCCEEEEEEc-CCcEEEEecCC--cccce--Eeeeeec-
Q psy14815 153 SR-DKSVWVWEVG-EEDEYECAAVIN--AHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDK--AEADW--INFATLK- 222 (479)
Q Consensus 153 ~~-dg~i~vwd~~-~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~--~~~~~~~- 222 (479)
+. ++.|++||+. +++. .....+. .+...+..++|+|+|+++++++. ++.|.+|+++. +.... ..+..+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp ETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred cCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 64 6799999998 5432 2222332 23566899999999999888775 68999998763 33210 1122222
Q ss_pred ---CCCc------cEEEEE-EccCCCEEEEeeCC-C-----eEEEEeccCCCCCCCCCCCCCCCceEEEE-EEecccccc
Q psy14815 223 ---SHTS------TVWSLA-FDRIGSRLATCSDD-A-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRT 285 (479)
Q Consensus 223 ---~~~~------~v~~~~-~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (479)
+|.. .+..++ |+|+|++|++++.+ + .|.+|++..... ...+. ....+ ...
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~------------~~~~~~~~~~~-~~~ 308 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS------------IEKQLFLSPTP-TSG 308 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC------------EEEEEEEEECS-SCC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC------------EEEeeeeeecC-CCC
Confidence 1222 588999 99999998876543 2 899999853211 11111 12222 445
Q ss_pred EEEEEecC---CCCeEEEEeCC-CeEEEcccCCC
Q psy14815 286 IYDISWCH---LTDLIATACGD-DAIRIFKENPE 315 (479)
Q Consensus 286 i~~l~~~~---~~~~l~~~~~d-g~i~vw~~~~~ 315 (479)
+..++|+| +|++|++++.+ +.|++|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 66789999 89999998864 89999998765
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=4.9e-20 Score=190.29 Aligned_cols=303 Identities=14% Similarity=0.126 Sum_probs=196.8
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccc-------------cCCCccceEEEeec---------CCcEEEecC
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-------------HGLPVETSLRQLVE---------DKNIRLWGK 72 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~-------------~~~~~~~~~~~~~~---------~~~i~~w~~ 72 (479)
.+++|+|+|++++++ .|++|++||+.+++....+ ...+++..++..+. ++.+.+||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 378999999666554 6999999999887754332 23466777777665 689999998
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE---------------
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV--------------- 137 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v--------------- 137 (479)
.... ... .......+..++|||||+.|+++. ++.|++||+.+++...+ ...++...+
T Consensus 98 ~~g~--~~~----~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 98 SNGE--FVR----GNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp TTTE--ECC----SSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTC
T ss_pred CCCc--ccc----ceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeeccc
Confidence 7421 100 001125688899999999999986 78999999988863321 112222222
Q ss_pred --EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEEeCCCCce--eee---eeee
Q psy14815 138 --KSVTWSKNGQFLATCSRDK----------------------------------SVWVWEVGEEDEY--ECA---AVIN 176 (479)
Q Consensus 138 --~~l~~~~~~~~l~~~~~dg----------------------------------~i~vwd~~~~~~~--~~~---~~~~ 176 (479)
.+++|+|||+.|++++.|. .|++||+.+++.. ..+ ..+.
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 4899999999999988652 7889999876321 011 1234
Q ss_pred ccccceeEEEEecCCCEEEEEEcCC----cEEEEe----cCCcccceEeeeee----cCCCccEE-----EEEEccCCCE
Q psy14815 177 AHIQDVKKVRFHPFDNILASASYDD----TVKLFK----EDKAEADWINFATL----KSHTSTVW-----SLAFDRIGSR 239 (479)
Q Consensus 177 ~~~~~v~~l~~~~~~~~l~~~~~dg----~i~i~d----~~~~~~~~~~~~~~----~~~~~~v~-----~~~~~~~~~~ 239 (479)
.|...+.+++|+|+++++++....+ .|.+|| ..+++. ...+ ..|...+. .+.|+|+|+.
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC----PKTQEHIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC----CGGGEEEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce----EEEEecccccCCceEccccCCccEECCCCCe
Confidence 5777899999999988777754332 488899 665442 2222 35666665 7899999996
Q ss_pred EEE--eeCCCe--EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEc
Q psy14815 240 LAT--CSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIF 310 (479)
Q Consensus 240 l~s--~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw 310 (479)
++. ...+|. |.+||+.... ...+..+ ...+..+.++ +++.|+..+.+ +..++|
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~----------------~~~lt~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVEN----------------AIQITSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY 387 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTT----------------CEECSCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred EEEEEEccCCceEEEEEECCCCc----------------eEecccC-ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence 654 445564 5555653321 1233332 4457777777 77776666654 888999
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.+....+.. ...++.....+|...+..+.|||++++++
T Consensus 388 ~~~~~~g~~---~~~~l~~~~~~~~~~~~~~~~s~dg~~l~ 425 (719)
T 1z68_A 388 RISIGSYPP---SKKCVTCHLRKERCQYYTASFSDYAKYYA 425 (719)
T ss_dssp EEECSSSSC---CEEESSTTTTTTTBCBEEEEECGGGSSEE
T ss_pred EEeCCCCCC---CceeccCccCCCCCceEEEEECCCCCEEE
Confidence 886522100 01122211223666788899999999875
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=5.1e-19 Score=164.91 Aligned_cols=252 Identities=7% Similarity=-0.010 Sum_probs=172.2
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccCC-cEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeC--
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEG-- 132 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~-- 132 (479)
.+++...++.+.+||.... ... .....++.. .+..++|+|++++++ ++..++.|.+||+.+++.........
T Consensus 3 ~~v~~~~~~~v~~~d~~~~--~~~--~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM--AVD--KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEETTTEEEEEETTTT--EEE--EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEEcCCCCeEEEEECCCC--cEE--EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 4677788999999998742 111 111122222 478899999998765 45557899999999887432222221
Q ss_pred -CCCcEEEEEEcCCCCEEEEEe------------CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc
Q psy14815 133 -HENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 133 -~~~~v~~l~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
+...+.+++|+|+++++++++ .++.|.+||+.+.+ ....+.. ...+.+++|+|++++|+++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~-~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEA-PRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEEC-CSSCCCEEECTTSSCEEEE--
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEeC-CCCcceeEECCCCCEEEEe--
Confidence 112567899999999999886 57999999998763 3333333 3457889999999988887
Q ss_pred CCcEEEEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeCCC------------------------eEEEEe
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDDA------------------------TVKIWK 253 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg------------------------~i~iwd 253 (479)
++.|.+||+.+++. ...+..+. .+ +.|+|+++.++..+..+ .|.+||
T Consensus 153 ~~~i~~~d~~~~~~----~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 225 (337)
T 1pby_B 153 GRDLHVMDPEAGTL----VEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225 (337)
T ss_dssp SSSEEEEETTTTEE----EEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred CCeEEEEECCCCcE----eeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence 68999999987653 33333322 32 37899988776554332 367888
Q ss_pred ccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccc
Q psy14815 254 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 333 (479)
+..... . ...+..+ ...+.+++|+|++++++++ ++.|++||+.+++ ....+.
T Consensus 226 ~~~~~~-------------~-~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~---------~~~~~~-- 277 (337)
T 1pby_B 226 LETGEM-------------A-MREVRIM-DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---------SIKRVP-- 277 (337)
T ss_dssp TTTCCE-------------E-EEEEEEC-SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---------EEEEEE--
T ss_pred CCCCCc-------------e-EeecCCC-CCceeeEEECCCCCEEEEe--CCeEEEEECCCCc---------Ccceec--
Confidence 744321 1 2223333 4578899999999999888 7999999998876 233322
Q ss_pred cccceeEEEecCCCCCCCcc
Q psy14815 334 HNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 334 h~~~v~~~~~sp~~~~l~~~ 353 (479)
....+.+++|+|++++|..+
T Consensus 278 ~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 278 LPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp CSSCCCEEEECTTSCEEEEE
T ss_pred CCCceeeEEECCCCCEEEEE
Confidence 23467899999999977554
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=5.6e-18 Score=159.98 Aligned_cols=247 Identities=10% Similarity=-0.001 Sum_probs=160.7
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcCCCCE--EEEEe-------------
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQF--LATCS------------- 153 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~--l~~~~------------- 153 (479)
...+..++|+|++++|++++.+ .|.+|++. +++.........+ +.+.+++|+|+|++ +++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3467889999999999999987 99999997 7764333332222 23556899999994 45553
Q ss_pred CCCcEEEEEeCC-CCceeeeeeee-ccccceeEEEEecCCCEEEEEEc-CCcEEEEecC-CcccceEeeeeec--CCCcc
Q psy14815 154 RDKSVWVWEVGE-EDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY-DDTVKLFKED-KAEADWINFATLK--SHTST 227 (479)
Q Consensus 154 ~dg~i~vwd~~~-~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~~~~~~~~~--~~~~~ 227 (479)
.+|.+.+|++.. ++....+..+. .+...+.+++|+|+|++++++.. ++.|++||+. +++. ..+..+. .|...
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV--ELVGSVDAPDPGDH 194 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE--EEEEEEECSSTTCC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE--EEeeeEecCCCCCC
Confidence 689999999974 32211222211 24457899999999998887764 6799999998 5543 2223332 24567
Q ss_pred EEEEEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccc------cEEEEE-ecCCCC
Q psy14815 228 VWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGR------TIYDIS-WCHLTD 296 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~i~~l~-~~~~~~ 296 (479)
+..++|+|+|+++++++. ++.|.+|++........ .....+..+... +.. .+..++ |+|+|+
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV-------YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE-------EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE-------EccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence 899999999999988775 68999998743211000 000011112111 011 588999 999999
Q ss_pred eEEEEeCC-C-----eEEEcccC-CCCCCCCceeeEEEeccccccccceeEEEecC---CCCCCCccc
Q psy14815 297 LIATACGD-D-----AIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP---VVPEPQKTN 354 (479)
Q Consensus 297 ~l~~~~~d-g-----~i~vw~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp---~~~~l~~~~ 354 (479)
+|++++.+ + .|.+|++. +++ ...+......+...+..++|+| ||++|+...
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~-------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGS-------IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSC-------EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCC-------EEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 88877643 2 89999996 343 0011111122344567899999 898886654
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=3.7e-18 Score=176.43 Aligned_cols=307 Identities=13% Similarity=0.114 Sum_probs=188.3
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC---------------CCccceEEEeecC---------Cc
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG---------------LPVETSLRQLVED---------KN 66 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~~~---------~~ 66 (479)
.....++.|+|||++++++ ||+|++||+.+++....+.. .+++..++....+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3446789999999999886 89999999998875433222 4556666666654 45
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE---------
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV--------- 137 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v--------- 137 (479)
+.+||+.... ......+...+...+|||||+.||.+. ++.|.+|++.+++...+ +..++...+
T Consensus 94 ~~~~d~~~~~------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~l-t~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 94 YDIYDLNKRQ------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI-TWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEETTTTE------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CSCCBTTTEEESBCCHHH
T ss_pred EEEEECCCCc------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEE-cCCCCccceecCcccccc
Confidence 6789988421 112345677899999999999999985 68999999988863322 222332222
Q ss_pred --------EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEEeCC---CCcee
Q psy14815 138 --------KSVTWSKNGQFLATCSRDK------------------------------------SVWVWEVGE---EDEYE 170 (479)
Q Consensus 138 --------~~l~~~~~~~~l~~~~~dg------------------------------------~i~vwd~~~---~~~~~ 170 (479)
.++.|||||+.|+.++.|. .|++||+.+ ++...
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 3589999999999876432 477788877 52111
Q ss_pred eeeeee------ccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEee--eee--cCCCccEE-----EE
Q psy14815 171 CAAVIN------AHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINF--ATL--KSHTSTVW-----SL 231 (479)
Q Consensus 171 ~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~--~~~~~~v~-----~~ 231 (479)
. ..+. .+...+..++|+|+|+.++..... ..|.+||+.+++..+.+. ..+ ..|...|. .+
T Consensus 246 ~-~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p 324 (740)
T 4a5s_A 246 S-IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP 324 (740)
T ss_dssp E-EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred E-EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCc
Confidence 1 1222 366778999999999977665432 369999998776211111 111 33544443 68
Q ss_pred EEccCCCEEE-Eee-CCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-EEEeC---
Q psy14815 232 AFDRIGSRLA-TCS-DDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACG--- 303 (479)
Q Consensus 232 ~~~~~~~~l~-s~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~--- 303 (479)
.|+|||+.|+ ..+ .+| .|++||...... ..+... ...+..+.. ++++.| ++++.
T Consensus 325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~----------------~~lT~g-~~~v~~~~~-~d~~~i~f~~~~~~~ 386 (740)
T 4a5s_A 325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDC----------------TFITKG-TWEVIGIEA-LTSDYLYYISNEYKG 386 (740)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEETTCSSC----------------EESCCS-SSCEEEEEE-ECSSEEEEEESCGGG
T ss_pred eEcCCCCEEEEEEEcCCCceEEEEEECCCCce----------------EecccC-CEEEEEEEE-EeCCEEEEEEecCCC
Confidence 8999999876 555 344 577777643221 122222 334444432 335544 44443
Q ss_pred -CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 304 -DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 304 -dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.+...||.+...... ...++.....+.......+.|||+++++
T Consensus 387 ~~~~~~ly~v~~~g~~----~~~~lt~~~~~~~~~~~~~~~S~dg~~~ 430 (740)
T 4a5s_A 387 MPGGRNLYKIQLIDYT----KVTCLSCELNPERCQYYSVSFSKEAKYY 430 (740)
T ss_dssp CTTCBEEEEEETTEEE----EEEESSTTTSTTTBCBEEEEECTTSSEE
T ss_pred CCceeEEEEEECCCCC----cceeeccccCCCCCceEEEEECCCCCEE
Confidence 234555554432200 0001111111234567889999999976
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=2.2e-18 Score=177.93 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=183.7
Q ss_pred ceEEEEECCCCCeEEEeeC---------CCcEEEEeccccccc--cc-------ccCCCccceEEEeecCCcEEEecCCC
Q psy14815 13 RVWNVSWNPQGTMISSCGE---------DKNIRLWVMVIREPY--EK-------LHGLPVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~---------dg~v~iwd~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
.|.+++|||||++|++++. ++.|++||+.+++.+ .. ....|++..++.. .++.|++|++..
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~ 139 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPG 139 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE-ECCeEEEEeCCC
Confidence 4999999999999999876 789999999988762 11 2224666666665 578999999875
Q ss_pred CCCceeeeEEeccccCCcE-----------------EEEEECCCCCEEEEEECCC-------------------------
Q psy14815 75 FGNKFTAKAILSDGHQRTI-----------------RETAWSPCGNFIASASFDA------------------------- 112 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v-----------------~~v~~~~~~~~l~t~~~dg------------------------- 112 (479)
.... .....++...| .+++|+|||++|++++.|.
T Consensus 140 g~~~----~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 140 DPPF----QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp SCCE----ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCcE----EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 3221 11112333222 4899999999999988652
Q ss_pred ---------eEEEEECCCCeEE---Ee---EEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEEE----eCCCCce
Q psy14815 113 ---------TTAVWDKRSGQFE---CN---ATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWE----VGEEDEY 169 (479)
Q Consensus 113 ---------~i~iwd~~~~~~~---~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~vwd----~~~~~~~ 169 (479)
.|++||+.+++.. .+ ..+.+|...+.+++|+||++++++....+ .|.+|| ..+++
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-- 293 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-- 293 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE--
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc--
Confidence 7899999887521 11 11335777899999999987777654332 488889 65542
Q ss_pred eeeeee----ecccccee-----EEEEecCCCEEEE--EEcCC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 170 ECAAVI----NAHIQDVK-----KVRFHPFDNILAS--ASYDD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 170 ~~~~~~----~~~~~~v~-----~l~~~~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
....+ ..|...+. .+.|+|+|+.++. +..+| .|.+||+.++. ...+..+...+..+.+. +
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-----~~~lt~~~~~v~~~~~~-d 366 (719)
T 1z68_A 294 -CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-----AIQITSGKWEAINIFRV-T 366 (719)
T ss_dssp -CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-----CEECSCSSSCEEEEEEE-C
T ss_pred -eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-----eEecccCceEEEEEEEE-e
Confidence 22233 35566666 7899999986654 44555 46666766544 23455566678887777 8
Q ss_pred CCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---cccccEEEEEecCCCCeEEEE-eCC--C
Q psy14815 237 GSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDISWCHLTDLIATA-CGD--D 305 (479)
Q Consensus 237 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~~~-~~d--g 305 (479)
++.++..+.+ +..++|.+....... + ...+.. .+...+..+.|+|++++++.. +.+ .
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~-----------~-~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p 434 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPP-----------S-KKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP 434 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSSSC-----------C-EEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCCCC-----------C-ceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC
Confidence 8887766654 889999875421100 0 111211 024567889999999877754 333 4
Q ss_pred eEEEcccCCCC
Q psy14815 306 AIRIFKENPEA 316 (479)
Q Consensus 306 ~i~vw~~~~~~ 316 (479)
.+.+||+.+++
T Consensus 435 ~~~l~d~~~g~ 445 (719)
T 1z68_A 435 ISTLHDGRTDQ 445 (719)
T ss_dssp EEEEECSSSCC
T ss_pred eEEEEECCCCC
Confidence 68888886654
No 168
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=9.5e-19 Score=176.06 Aligned_cols=220 Identities=10% Similarity=0.052 Sum_probs=157.7
Q ss_pred cCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeC---CCcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSR---DKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~ 163 (479)
+..+|.+++|+|||++|++++. ||+++||++.+++ ...+..+. ..+.++.|+|| +.+++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~---~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE---TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE---EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC---cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 3568999999999999999887 9999999997775 23444454 58999999999 77777765 455677766
Q ss_pred CC--CCceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 164 GE--EDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 164 ~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
.. ..... .+... ......+|+|+++. +++.+.++.+.+||+.+++. ..+..+.. .+++|+|||++|
T Consensus 96 ~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----~~l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 96 NTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----RELARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp ETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----EEEEEESS--CEEEEEEETTEE
T ss_pred eccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----EEeecCCC--ceEEECCCCCEE
Confidence 54 32212 22211 23446688888753 33444455566999987653 12222222 789999999999
Q ss_pred EEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC--eEEEcccCC
Q psy14815 241 ATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENP 314 (479)
Q Consensus 241 ~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg--~i~vw~~~~ 314 (479)
++++.+ +.|++||+..+.. ..+..+ ...+..++|+|||++|+++..++ .|++||+.+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~----------------~~l~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL----------------RVFDSG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC----------------EEECCS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc----------------eEeecC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988877 7899999754321 244554 66789999999999999888888 899999998
Q ss_pred CCCCCCceeeEEEeccccccccceeEEE--------ecCCCCCCC
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPEPQ 351 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------~sp~~~~l~ 351 (479)
++ .. ...+|...+..++ |||||..++
T Consensus 228 ~~----------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 228 GS----------VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp CC----------EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred Cc----------EE-EccCCCcChhhhhhccccceeEcCCCcEEE
Confidence 87 33 4457777777777 999995543
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=2.9e-17 Score=154.46 Aligned_cols=277 Identities=13% Similarity=0.075 Sum_probs=184.6
Q ss_pred ccccccccceEEEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
.++..+..+ .++|+|||+++++++ .+++|.+||..+++.+..+...+.
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-------------------- 102 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-------------------- 102 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT--------------------
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc--------------------
Confidence 344445555 899999999998886 367799999877666554421000
Q ss_pred CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEE-EeCCCCcEEEEEEcCCC-CEEE
Q psy14815 75 FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLA 150 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~ 150 (479)
...+......++++|+|++|+++.. +++|.+||+.+++ .+.. +.. . ....+.+.|++ ..++
T Consensus 103 -----------~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~--~~~~~i~~-~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 103 -----------RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD--YVEDVTAA-A-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp -----------BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE--EEEEEGGG-T-TEEEEEECTTSSSEEE
T ss_pred -----------ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc--EEEEEecC-C-CcceeEEcCCCCeeEE
Confidence 0012345667899999999998874 5899999999986 3444 332 2 22335667765 6788
Q ss_pred EEeCCCcEEEEEeCCCCcee-ee---eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---
Q psy14815 151 TCSRDKSVWVWEVGEEDEYE-CA---AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--- 223 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~-~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--- 223 (479)
+.+.||.+.+|++....... .. ..+.....++ .+.+++++..++..+.++.|.++|+............+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDED 246 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccc
Confidence 88999999999987632211 11 1112222222 3344677777777888999999998754421111111100
Q ss_pred -C----CccEEEEEEccCCCEEEEeeC-----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 224 -H----TSTVWSLAFDRIGSRLATCSD-----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 224 -~----~~~v~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
+ ......++|+|+++.++++.. .+.|.+||+. +.+.+.++..+ . +.
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~---------------t~~~v~~i~~~-~--p~ 308 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK---------------TKQRVARIPGR-D--AL 308 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT---------------TTEEEEEEECT-T--CC
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC---------------CCcEEEEEecC-C--ee
Confidence 0 011112689999888877643 3489999973 34667888875 3 99
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCC--CCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPE--AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
+++|+|+|++|++++. +.|.+||..++ + ++..+ ..+......++++|+|.
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~---------~~~~i-~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQPEPK---------LLRTI-EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSSSCE---------EEEEE-TTSCSSEEEEEECCCSC
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCCcce---------eeEEe-ccCCCCcEEEEecCCCC
Confidence 9999999999998887 99999999998 6 34443 34566788999999986
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=3.3e-16 Score=142.47 Aligned_cols=247 Identities=13% Similarity=0.161 Sum_probs=173.9
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.+|-..+.+++++++++++++.+.++.|.+||.. ++.+..+... + ...
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~-----------------------~--------~~~ 73 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGEC-----------------------G--------KRD 73 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCB-----------------------S--------SST
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEeccc-----------------------C--------CCc
Confidence 3566789999999999988888889999999965 3332222100 0 012
Q ss_pred ccCCcEEEEEE-CCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 88 GHQRTIRETAW-SPCGNFIASASF-DATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 88 ~~~~~v~~v~~-~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
++...+..+++ .+++.++++... ++.|.+||. +++ ....+. .+...+.+++++++++++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQ--FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSC--EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCc--EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 34567889999 467766666543 789999994 454 333443 234578999999999977777778999999965
Q ss_pred CCCceeeeeeee--ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CCccEEEEEEccCCCEE
Q psy14815 165 EEDEYECAAVIN--AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 165 ~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 240 (479)
.. ....+. .+...+..++++|+++++++...++.|++||..... +..+.. +...+..++++++|+.+
T Consensus 151 g~----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~g~~~~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 151 GN----VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-----LRQIGGEGITNYPIGVGINSNGEIL 221 (286)
T ss_dssp SC----EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-----EEEESCTTTSCSEEEEEECTTCCEE
T ss_pred CC----EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-----EEEEccCCccCCCcEEEECCCCCEE
Confidence 42 222222 334568899999999988887889999999975321 333332 33678999999999888
Q ss_pred EEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 241 ATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 241 ~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++...++ .|.+||.. . +.+..+..+. ...+.+++++|+|+++++ +.|+.|++|++...
T Consensus 222 v~~~~~~~~i~~~~~~-g---------------~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 222 IADNHNNFNLTIFTQD-G---------------QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEECSSSCEEEEECTT-S---------------CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEeCCCCEEEEEECCC-C---------------CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 8887776 99999842 1 2234444331 234789999999987776 67999999998654
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=1.3e-18 Score=166.04 Aligned_cols=263 Identities=11% Similarity=0.029 Sum_probs=170.2
Q ss_pred eEEEEECCCCCeEEEeeCC-C--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 14 VWNVSWNPQGTMISSCGED-K--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~d-g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
+.+++|+|||++|+.+... + .|.+||+.+++..... .++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-------------------------------------~~~~ 80 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-------------------------------------EGKG 80 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-------------------------------------CSSC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-------------------------------------cCCC
Confidence 7888999999998877543 3 5777777655432111 1112
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEE-------------------EEEcCCCCEEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKS-------------------VTWSKNGQFLAT 151 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~l~~ 151 (479)
.....+.|+|+|++|+.++.++.|.+||+.+++...+. ..+...... +.|+|+++.++.
T Consensus 81 ~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 81 DNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY--TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp BCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred CccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE--ecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 22223679999999999999999999999988643333 323332222 346777776655
Q ss_pred E-----eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcC------CcEEEEecCCcccceEeee
Q psy14815 152 C-----SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 152 ~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~ 219 (479)
+ ..+..|.+||+.+++. ..+..+...+..+.|+| +++.|+..+.+ ..|.+||+..+.. .
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~ 229 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGEL----EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----R 229 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----E
T ss_pred eeeccCCCcceEEEEECCCCcE----EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----e
Confidence 4 3556899999987642 12234566789999999 78877776643 3588888865442 2
Q ss_pred eecCC--CccEEEEEEccCCCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 220 TLKSH--TSTVWSLAFDRIGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 220 ~~~~~--~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.+..+ ...+..+.|+|+|++|+.++.+ +.|++||+..... ..+..+.+ .. +.|+
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~~~~-----~~-~~~s 290 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------------EEVMVMPP-----CS-HLMS 290 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------------EEEEECCS-----EE-EEEE
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-------------EEeeeCCC-----CC-CCcc
Confidence 22222 3358889999999988776544 4599999754321 11222211 22 8899
Q ss_pred C-CCCeEEEEe----------------CCCeEEEcccCCCCCCCCceeeEEEecccccccc-----------ceeEEEec
Q psy14815 293 H-LTDLIATAC----------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWN 344 (479)
Q Consensus 293 ~-~~~~l~~~~----------------~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~s 344 (479)
| +|+++++++ .++.|++||+.+++ ...+ ..+.. .+..++|+
T Consensus 291 ~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~~~~~~~~~s 359 (396)
T 3c5m_A 291 NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS----------AQKL-CKHSTSWDVLDGDRQITHPHPSFT 359 (396)
T ss_dssp CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB----------CCEE-EECCCCCCCBTTBSSTTCCCCEEC
T ss_pred CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc----------eEEc-cCCCCccccccccccCCCCCceEc
Confidence 9 999888765 34789999998775 1111 12222 25667899
Q ss_pred CCCCCCCccc
Q psy14815 345 PVVPEPQKTN 354 (479)
Q Consensus 345 p~~~~l~~~~ 354 (479)
|||+.|+...
T Consensus 360 ~dg~~l~~~s 369 (396)
T 3c5m_A 360 PNDDGVLFTS 369 (396)
T ss_dssp TTSSEEEEEE
T ss_pred cCCCeEEEEe
Confidence 9998876543
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=9.6e-17 Score=149.12 Aligned_cols=269 Identities=10% Similarity=0.050 Sum_probs=182.1
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-+.+.+++++|+|+++++.+.++.+++++... ...+....... ..++.+.+||..+.. . ......++.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~i~~~d~~~g~--~--~~~~~~~~~ 90 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDS---KFVYQQRGLGP-----IEEDTILVIDPNNAE--I--LQSSGKNLF 90 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCT---TSCBSCGGGCS-----CCSCCEEEECTTTCC--E--EEEECTTTC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCc---ceeeccccccc-----ccCCcEEEEECCCCe--E--EeccCCCcc
Confidence 46799999999999999888886655543322 22221111111 146778888775322 1 111223455
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE---------eCCCCcEEEEEEcC-CCCEEEEEe-CCCcEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL---------EGHENEVKSVTWSK-NGQFLATCS-RDKSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~~~~-~dg~i~ 159 (479)
.....++++|+|+++++...++.|++||..... ..+..+ ..+-.....++++| ++.++++.+ .++.|+
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 688999999999988888889999999986542 123334 23445689999999 788777776 689999
Q ss_pred EEEeCCCCceeeeeeeec----------cccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCc
Q psy14815 160 VWEVGEEDEYECAAVINA----------HIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATL--KSHTS 226 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~----------~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~ 226 (479)
+||.. +. ....+.. +-.....++++|+ ++++++...++.|++||..+++. +..+ ..+..
T Consensus 170 ~~~~~-g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~----~~~~~~~~~~~ 241 (329)
T 3fvz_A 170 QFSPS-GK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF----VREIKHASFGR 241 (329)
T ss_dssp EECTT-SC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEEECCTTTTT
T ss_pred EEcCC-CC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE----EEEEeccccCC
Confidence 99944 32 2222321 2234789999998 77777777889999999985553 3333 45667
Q ss_pred cEEEEEEcc------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe--ccccccEEEEEecCCCCeE
Q psy14815 227 TVWSLAFDR------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 227 ~v~~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~l 298 (479)
.+..++|+| +++..++...+..|++||.... +.+..+. ..+...+..++++|+|.++
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g---------------~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG---------------EIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC---------------CEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC---------------eEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 788999999 3332333334558999997443 3344442 1125678999999999888
Q ss_pred EEEeCCCeEEEcccCCC
Q psy14815 299 ATACGDDAIRIFKENPE 315 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~~ 315 (479)
++...++.|++|++...
T Consensus 307 vad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 307 IGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEESSSCCEEEEEEEEC
T ss_pred EEECCCCEEEEEeCCcc
Confidence 88888999999998653
No 173
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=2.1e-17 Score=154.83 Aligned_cols=235 Identities=8% Similarity=0.039 Sum_probs=158.5
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCceeee
Q psy14815 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~ 172 (479)
.+++++++.++++++.++.|.+||+.+++ ....+..+. ..+..++|+|+++.+++ +..++.|.+||+.+++ ..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~---~~ 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK---NT 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE---EE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc---EE
Confidence 35678888999999999999999999987 344444332 25789999999986654 4568999999998873 33
Q ss_pred eeeec-c-----ccceeEEEEecCCCEEEEEEcC------------CcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 173 AVINA-H-----IQDVKKVRFHPFDNILASASYD------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 173 ~~~~~-~-----~~~v~~l~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
..+.. + ...+.+++|+|+++++++++.+ +.|.+||+.+++.. ..+.... +...+.+++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~s 156 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFP-MPRQVYLMRAA 156 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEEE-CCSSCCCEEEC
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-ceeeecc-CCCcccceeEC
Confidence 33322 1 2337889999999999998865 89999999875421 1122222 33468889999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC-----------------CC--Cce-EE--------------------
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-----------------ND--SVW-KC-------------------- 274 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~--~~~-~~-------------------- 274 (479)
|+++ +++++. .|++||.........++... .. ... .+
T Consensus 157 ~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 233 (349)
T 1jmx_B 157 DDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY 233 (349)
T ss_dssp TTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred CCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccce
Confidence 9999 666543 49999987654322221110 00 000 00
Q ss_pred -------------EEEEeccccccEEEEEecC-CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeE
Q psy14815 275 -------------VCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 275 -------------~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
...+.. ....+..++|+| ++++++++ ++.|.+||+.+++ ....+. ....+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~---------~~~~~~--~~~~~~~ 299 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFAD-LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK---------LIKAAN--LDHTYYC 299 (349)
T ss_dssp EEEEEETTTCCEEEEEEEE-CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE---------EEEEEE--CSSCCCE
T ss_pred eEEEEeccCCcEEeccccc-CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe---------EEEEEc--CCCCccc
Confidence 000011 133577889999 99999888 8899999999876 333332 2335789
Q ss_pred EEecCCCCCCCcc
Q psy14815 341 VAWNPVVPEPQKT 353 (479)
Q Consensus 341 ~~~sp~~~~l~~~ 353 (479)
++|+|++++|...
T Consensus 300 ~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 300 VAFDKKGDKLYLG 312 (349)
T ss_dssp EEECSSSSCEEEE
T ss_pred eEECCCCCEEEEe
Confidence 9999999988653
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=4.9e-17 Score=166.22 Aligned_cols=288 Identities=9% Similarity=-0.007 Sum_probs=182.0
Q ss_pred cccccccccceEEEEECCCCCeEEEe--eCCCcEEEEecccccccccccCC---------------------Cccce-EE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSC--GEDKNIRLWVMVIREPYEKLHGL---------------------PVETS-LR 59 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~~~---------------------~~~~~-~~ 59 (479)
.+.+.+|...|..++|++++-++++. +.++...||....+.....+..+ |++.. ++
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 35577899999999999887777777 56889999985433322222111 34444 44
Q ss_pred Eeec-CCcEEEecCCCCC-CceeeeEEeccc---cCCcEEEEEECCCCCEEEEEECC----------CeEEEEECCC---
Q psy14815 60 QLVE-DKNIRLWGKESFG-NKFTAKAILSDG---HQRTIRETAWSPCGNFIASASFD----------ATTAVWDKRS--- 121 (479)
Q Consensus 60 ~~~~-~~~i~~w~~~~~~-~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~t~~~d----------g~i~iwd~~~--- 121 (479)
.... +..|.+++....+ .. ........ |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 3322 3445555543001 11 11111111 56788999999999999999877 5899999988
Q ss_pred ---CeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCC--------cEEEEEeC-CCCceeeeeeeeccccceeEEEEe
Q psy14815 122 ---GQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDK--------SVWVWEVG-EEDEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 122 ---~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg--------~i~vwd~~-~~~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
++. ..+. .+...+..++|+|||++|+.++.++ .|.+||+. ++...........+...+..+.|+
T Consensus 174 ~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 174 ADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred ccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 542 3444 5567788999999999999887553 79999998 342112222333456789999999
Q ss_pred cCCCEEEEEEcCC--cEEEEecCCcccceEeeeeecCCCcc--------EEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 189 PFDNILASASYDD--TVKLFKEDKAEADWINFATLKSHTST--------VWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 189 ~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
|+|++++++..++ .|.+||..+++. ..+ ...+... +..++|+++++.+++++. +.+++|.+....
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~--~~l--~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAA--TQL--CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCE--EES--SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCce--eec--ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 9999888888888 556666544432 111 1122211 467899999999999998 999999653221
Q ss_pred CCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEEEeCCCe--EEEcccCCCC
Q psy14815 259 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATACGDDA--IRIFKENPEA 316 (479)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~~~~dg~--i~vw~~~~~~ 316 (479)
. . +..+..+ ...+..+ +++.+.-++++++.+.. |.+||+.+++
T Consensus 326 ~-------------~-~~~l~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 326 G-------------E-LVDAAGP-WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp T-------------E-EEECCSS-CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred C-------------c-EEEecCC-CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 1 1 3455554 5566666 55433334445555544 4455555543
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=3.7e-16 Score=145.49 Aligned_cols=275 Identities=8% Similarity=0.053 Sum_probs=180.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..|.++.|++++..++..+.++.++.|. ++.... ...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------------------------~~~~~~ 45 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLE-------------------------------------ISKKGL 45 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEE-------------------------------------EESSCC
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEE-------------------------------------EeccCc
Confidence 4577788888877777767777788872 111111 123455
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEEeCCCC
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEED 167 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~vwd~~~~~ 167 (479)
.+.+++|++++++++++..++.|.+||..+++... ....+...+.+++++++++++++...+ +.|.+||..+..
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE--EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 67899999999988888889999999999886332 222456789999999999877777666 689999988764
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
...... ...+...+.+++++|+++++++... .+.|..+|..++.. ..+......+..++|+|+++.++
T Consensus 124 ~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 124 LQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp CEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEEEESSEEEEEECTTSSEEE
T ss_pred EEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-----EEeecCCCcccceEECCCCCEEE
Confidence 221111 1123456889999999987776653 24566666554332 11222234578899999998665
Q ss_pred -EeeCCCeEEEEeccCCCCCCCCCCCCCCCce--EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 242 -TCSDDATVKIWKEYKPGNSAGIPTPDNDSVW--KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 242 -s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
+.+.++.|.+||+....... ... .....+.+ ...+..++++++|.++++...++.|.+|+.+ ++
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~--------~~~~~~~~~~~~~--~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~-- 264 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTI--------QPFGATIPYYFTG--HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GY-- 264 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSE--------EEEEEEEEEECCS--SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SC--
T ss_pred EEeCCCCeEEEEEecCCCcCc--------ccccceEEEecCC--CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CC--
Confidence 44567899999985321110 000 01111222 1367889999999988888888999999984 33
Q ss_pred CCceeeEEEecccc-----ccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHR-----AHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+..+.. +|...+.+++|+||+..|..+.
T Consensus 265 -------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 265 -------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp -------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred -------EEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 1222211 1222689999999987775443
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=2.1e-16 Score=150.48 Aligned_cols=246 Identities=9% Similarity=0.055 Sum_probs=158.1
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
...+|...+..+.|+|||+.|+.++.++.|.+||+.+++....+
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~------------------------------------ 118 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY------------------------------------ 118 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE------------------------------------
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee------------------------------------
Confidence 34456666667889999999999998899999998876543222
Q ss_pred ccccCCcEEEE--EECCCCCEEEEE----------------------ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEE
Q psy14815 86 SDGHQRTIRET--AWSPCGNFIASA----------------------SFDATTAVWDKRSGQFECNATLEGHENEVKSVT 141 (479)
Q Consensus 86 ~~~~~~~v~~v--~~~~~~~~l~t~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 141 (479)
..+...+... .++|++.+++.. ..+..|.+||+.+++.. .+..+...+..+.
T Consensus 119 -~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~---~l~~~~~~~~~~~ 194 (388)
T 3pe7_A 119 -QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST---VILQENQWLGHPI 194 (388)
T ss_dssp -ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE---EEEEESSCEEEEE
T ss_pred -echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE---EeecCCccccccE
Confidence 1122223222 347788777643 23468999999998643 3334556789999
Q ss_pred EcC-CCCEEEEEeCC------CcEEEEEeCCCCceeeeeeeeccc--cceeEEEEecCCCEEEEEEc-CC----cEEEEe
Q psy14815 142 WSK-NGQFLATCSRD------KSVWVWEVGEEDEYECAAVINAHI--QDVKKVRFHPFDNILASASY-DD----TVKLFK 207 (479)
Q Consensus 142 ~~~-~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~~~~~-dg----~i~i~d 207 (479)
|+| +|+.|+....+ ..|.++|...... ..+..+. ..+...+|+|+|+.|+..+. ++ .|.+||
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 195 YRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM----RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC----EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred ECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce----EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 999 99988877763 3677778765432 2232333 35778899999997766543 22 399999
Q ss_pred cCCcccceEeeeeecCCCcc---EEEEEEccCCCEEEEe---------eCCCeEEEEeccCCCCCCCCCCCCCCCceEEE
Q psy14815 208 EDKAEADWINFATLKSHTST---VWSLAFDRIGSRLATC---------SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 275 (479)
+.+++. ..+..+..+... ...+.|+|+|+.|+.. ..+..|++||+... + .
T Consensus 271 ~~~g~~--~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---------------~-~ 332 (388)
T 3pe7_A 271 PETLEN--RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG---------------T-Q 332 (388)
T ss_dssp TTTCCE--EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT---------------E-E
T ss_pred cCCCce--EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC---------------c-e
Confidence 988764 233333331111 1113699999988753 45668999998442 1 2
Q ss_pred EEEeccccc-----------cEEEEEecCCCCeEEEEe-CCCeEEEcccCC
Q psy14815 276 CTLSGHHGR-----------TIYDISWCHLTDLIATAC-GDDAIRIFKENP 314 (479)
Q Consensus 276 ~~~~~~~~~-----------~i~~l~~~~~~~~l~~~~-~dg~i~vw~~~~ 314 (479)
..+..+ .. .+.+++|+|||+.|+.++ .+|...+|.++.
T Consensus 333 ~~l~~~-~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 333 HRVARH-DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEEEEC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEeccc-cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 233333 22 477889999999887665 467767775543
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=1.1e-15 Score=157.37 Aligned_cols=249 Identities=8% Similarity=-0.004 Sum_probs=170.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCCC-----cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDK-----NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||.++.++ .|++||+.+++.....
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~---------------------------------- 167 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV---------------------------------- 167 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE----------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc----------------------------------
Confidence 4555789999999999998776543 7999998876643211
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe----------------EEEEECCCCeEEEeEEEe--CCCCcEEEEEEcCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT----------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKN 145 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~----------------i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~ 145 (479)
. ....+..++|+|||+.|+.++.++. |++|++.+++......+. .+...+..+.|+||
T Consensus 168 ---~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 168 ---L-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp ---E-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred ---c-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC
Confidence 0 1112567899999999999988766 999999887532222333 34556889999999
Q ss_pred CCEEEEEeC-----CCcEEEEEeCC------CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCC
Q psy14815 146 GQFLATCSR-----DKSVWVWEVGE------EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDK 210 (479)
Q Consensus 146 ~~~l~~~~~-----dg~i~vwd~~~------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~ 210 (479)
|++|+.++. +..|.+||+.+ +. .....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.+
T Consensus 244 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITGI--LKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS--CCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred CCEEEEEEEccCCCccEEEEEECcccccccCCc--cceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999888765 56899999976 32 123344455555544 488888887776653 3599999987
Q ss_pred cccceEeeeeecCCCc--cEEEEEEccCCCEEEEeeCCCeEEE--EeccCCCCCCCCCCCCCCCceEEEEEEeccccccE
Q psy14815 211 AEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKI--WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (479)
+... ....+..|.. .+..+.|++++.++++...|+..+| |++..+ +.+..+..+ ...+
T Consensus 321 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g---------------~~~~~l~~~-~~~v 382 (710)
T 2xdw_A 321 PEES--KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG---------------ALLKIFPLE-VGSV 382 (710)
T ss_dssp CCGG--GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECCC-SSEE
T ss_pred CCcc--cceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC---------------CEEEecCCC-CceE
Confidence 6420 1123333433 6888999877778888888886555 454222 234555555 6678
Q ss_pred EEEEecCCCCeEEEE-e---CCCeEEEcccCCCC
Q psy14815 287 YDISWCHLTDLIATA-C---GDDAIRIFKENPEA 316 (479)
Q Consensus 287 ~~l~~~~~~~~l~~~-~---~dg~i~vw~~~~~~ 316 (479)
..++++|+++.++.. + ..++++.||+.+++
T Consensus 383 ~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 383 VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 899999998765533 2 24789999998765
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=2.1e-15 Score=137.88 Aligned_cols=248 Identities=12% Similarity=0.080 Sum_probs=166.9
Q ss_pred ccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+..+.....+++|+|+++ +++++..++.|..||..++ ...+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~---------------------------------- 64 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE---------------------------------- 64 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE----------------------------------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE----------------------------------
Confidence 45556677889999999998 7788888899999997654 2111
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-C-CCCcEEEEEEcCCCCEEEE----EeC---
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-G-HENEVKSVTWSKNGQFLAT----CSR--- 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~-~~~~v~~l~~~~~~~~l~~----~~~--- 154 (479)
..+...+.+++++++++++++...++.|.+||..+++........ . ....+..++++|+|+++++ |+.
T Consensus 65 ---~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 65 ---MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPE 141 (296)
T ss_dssp ---ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGG
T ss_pred ---ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccc
Confidence 124567899999999998887777789999999888643322111 1 1234678999999998887 331
Q ss_pred --------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecC-CcccceEeeeeecCCC
Q psy14815 155 --------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED-KAEADWINFATLKSHT 225 (479)
Q Consensus 155 --------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~ 225 (479)
.+.-.+|.+..... ...+..+......++|+|+++.+++.+.++.|.+|++. .+... .....+..+.
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~g~---~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~~~~~ 217 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPDGT---LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHFTVEP 217 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTTSC---EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEECCSS
T ss_pred ccccccccCCCcEEEEECCCCC---EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEeeCCC
Confidence 01124444443222 22233445567899999999988777778999999987 32210 0011123355
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe-cCCCCeEEEEeCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGD 304 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~l~~~~~d 304 (479)
..+..++++++|+.+++. ++.|.+||.. .+.+..+..+ .. +.+++| +|+++.|++++.+
T Consensus 218 ~~p~~i~~d~~G~l~v~~--~~~v~~~~~~----------------g~~~~~~~~~-~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA--GDGVHVLTPD----------------GDELGRVLTP-QT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE--TTEEEEECTT----------------SCEEEEEECS-SC-CCEEEEESTTSCEEEEEETT
T ss_pred CCCCeEEECCCCCEEEEc--CCeEEEECCC----------------CCEEEEEECC-CC-ceeEEEECCCCCEEEEEcCC
Confidence 566789999999866655 7889999963 2345566654 44 889999 5888888888765
Q ss_pred CeEEEcccCCCC
Q psy14815 305 DAIRIFKENPEA 316 (479)
Q Consensus 305 g~i~vw~~~~~~ 316 (479)
.+.-++.++..
T Consensus 278 -~l~~~~~~~~~ 288 (296)
T 3e5z_A 278 -EFWSIETNVRG 288 (296)
T ss_dssp -EEEEEECSCCB
T ss_pred -eEEEEEccccc
Confidence 44444555443
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.4e-14 Score=134.85 Aligned_cols=243 Identities=9% Similarity=-0.021 Sum_probs=161.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..+.++...+.+++|+|+|++++++..++.|.+||..+++.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~----------------------------------- 82 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF----------------------------------- 82 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-----------------------------------
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-----------------------------------
Confidence 345566777899999999998888888899999997655432110
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC------
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------ 154 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------ 154 (479)
..+...+.+++++|+++++++...+ +.|.+||..++.......-..+...+.++.++|+++++++...
T Consensus 83 --~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 83 --VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp --ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred --eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 1245679999999999888877766 6899999988763312111124457899999999987776653
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE-EEcCCcEEEEecCCcccceE-----eeeeecCCCccE
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWI-----NFATLKSHTSTV 228 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~v 228 (479)
.+.|..+|..+.+ .. .+......+..++|+|+++.|+. .+.++.|.+||......... ....+..+ ..+
T Consensus 161 ~~~l~~~~~~~~~-~~---~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 161 LGGVYYVSPDFRT-VT---PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp CEEEEEECTTSCC-EE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred CceEEEEeCCCCE-EE---EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 2445555544332 11 22223345788999999986654 45678999999964211111 11112222 467
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-----ccEEEEEecCCCCeEEEEeC
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-----RTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~~~ 303 (479)
..++++++|+.+++...++.|.+||.. . +.+..+..... ..+.+++|+|+++.|+.++.
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~~-g---------------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNKR-G---------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTT-S---------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CceEECCCCCEEEEEcCCCEEEEECCC-C---------------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 889999999988877778999999862 1 22334433211 15889999999877766555
Q ss_pred CC
Q psy14815 304 DD 305 (479)
Q Consensus 304 dg 305 (479)
++
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 53
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=6.2e-15 Score=137.95 Aligned_cols=205 Identities=11% Similarity=0.122 Sum_probs=137.7
Q ss_pred CcEEEEEECCCCCEEEEEECC---C--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC----------
Q psy14815 91 RTIRETAWSPCGNFIASASFD---A--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---------- 155 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---------- 155 (479)
..+..++|+|||++|+.++.+ + .|.+||+.+++...+... .. +..+.|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA---KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE---SE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC---CC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 457889999999999988754 3 488889988864333322 23 8999999999988888642
Q ss_pred -----------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC-------cEEEEecCCc
Q psy14815 156 -----------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------TVKLFKEDKA 211 (479)
Q Consensus 156 -----------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-------~i~i~d~~~~ 211 (479)
..|.+||+.+++ ....+.. . .+..+.|+|+| +++++..++ ...+|.++++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEE---VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTE---EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred cccceeecCcccccCccceEEEEECCCCe---EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 568899998763 2122333 3 78899999999 777776542 4455554432
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC--------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD--------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
+ ...+..+ ..+..+ +|+|++|+.++.+ ..|.+|| .. . ...+...+.
T Consensus 209 ~-----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~---------------~~~l~~~~~ 262 (347)
T 2gop_A 209 K-----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-E---------------VMGILDEVD 262 (347)
T ss_dssp E-----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-C---------------EEESSTTCC
T ss_pred c-----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-c---------------eEeccccCC
Confidence 2 1222223 445544 9999998877754 3577776 11 1 122222235
Q ss_pred ccEEE-EEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecC
Q psy14815 284 RTIYD-ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 284 ~~i~~-l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
..+.. +.|+ ++ ++++++.++.+++| +..++ ...+. .+...|.+++|+|
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~----------~~~~~-~~~~~v~~~~~s~ 311 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE----------IKPIA-KGRHWIMGFDVDE 311 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS----------EEEEE-CSSSEEEEEEESS
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc----------eEEEe-cCCCeEEeeeeeC
Confidence 57776 8999 88 99999999999999 87443 22222 3467889999999
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=8.5e-16 Score=157.63 Aligned_cols=248 Identities=11% Similarity=0.024 Sum_probs=166.5
Q ss_pred ccccceEEEEECCCCCeEE-----EeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~-----t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+.+++|||||++|| .|+.+.+|++||+.+++.+....
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~--------------------------------- 164 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV--------------------------------- 164 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC---------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc---------------------------------
Confidence 5666899999999999998 45556789999998877531000
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe-------------EEEEECCCCeEE--EeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT-------------TAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~-------------i~iwd~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
... .....++|+|||+.|+.++.|.. |++|++.+++.. .+.....+...+.++.|+|||++
T Consensus 165 --~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 165 --IEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp --BSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC
T ss_pred --cCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE
Confidence 000 11156899999999999998776 999999887522 33333345567899999999999
Q ss_pred EEEEeCCC----cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc----CCcEEEEecCCccc-ceEeee
Q psy14815 149 LATCSRDK----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEA-DWINFA 219 (479)
Q Consensus 149 l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----dg~i~i~d~~~~~~-~~~~~~ 219 (479)
|+.++.++ .|.+|+..++ ....+..+...+....+ ++++ ++..+. ++.|.+||+.++.. .+..+
T Consensus 241 l~~~~~~~~~~~~l~~~~~~~~----~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l- 313 (695)
T 2bkl_A 241 LFVYILRGWSENDVYWKRPGEK----DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEI- 313 (695)
T ss_dssp EEEEEEETTTEEEEEEECTTCS----SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEE-
T ss_pred EEEEEeCCCCceEEEEEcCCCC----ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEE-
Confidence 88887665 5666654333 12334444555566666 5666 444443 57899999976542 11221
Q ss_pred eecCC-CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 220 TLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 220 ~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
+..+ ...+..++|+ ++..+++...|+..++|.+.... .....+..+....+..++++|+++.+
T Consensus 314 -~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g--------------~~~~~l~~~~~~~v~~~~~s~d~~~l 377 (695)
T 2bkl_A 314 -VPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG--------------KPVRTVQLPGVGAASNLMGLEDLDDA 377 (695)
T ss_dssp -ECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC--------------CEEEECCCSSSSEECCCBSCTTCSEE
T ss_pred -ecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC--------------CeeEEecCCCCeEEEEeecCCCCCEE
Confidence 2222 4567888888 67788888999999998764221 22344444335578888999998866
Q ss_pred EEEe----CCCeEEEcccCCCC
Q psy14815 299 ATAC----GDDAIRIFKENPEA 316 (479)
Q Consensus 299 ~~~~----~dg~i~vw~~~~~~ 316 (479)
+... ..++|++||+.+++
T Consensus 378 ~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 378 YYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEcCCCCCCEEEEEECCCCc
Confidence 6332 34789999998765
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=1.4e-15 Score=157.21 Aligned_cols=237 Identities=15% Similarity=0.186 Sum_probs=154.9
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC-----cEEEEEECCCCCEEEEEECC---------CeEEEEE
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFD---------ATTAVWD 118 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~t~~~d---------g~i~iwd 118 (479)
+++..+++. ++.|.+|+....... ....+|.. ....++|||||++|+.++.+ +.+.+||
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSS-----VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEE-----EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceE-----EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 445444443 899999998853321 12233332 23458899999999999876 5677999
Q ss_pred CCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc-----------------c
Q psy14815 119 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----------------D 181 (479)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------------~ 181 (479)
+.+++. ..+..+...+...+|||||+.|+.+ .++.|++||+.++...+. +..++.. .
T Consensus 99 ~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l--t~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 99 LNKRQL---ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI--TWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp TTTTEE---CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC--CSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred CCCCcE---EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE--cCCCCccceecCcccccccchhcCC
Confidence 999963 3456677889999999999999888 468999999987643221 1122221 1
Q ss_pred eeEEEEecCCCEEEEEEcCC------------------------------------cEEEEecCC---cccceEeeeeec
Q psy14815 182 VKKVRFHPFDNILASASYDD------------------------------------TVKLFKEDK---AEADWINFATLK 222 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~~~~~~~~~~~ 222 (479)
...+.|||||+.|+.++.|. .|++||+.+ ++.. ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~--~~~~l~ 250 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA--TSIQIT 250 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC--CEEEEC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc--eEEEec
Confidence 23589999999999876332 477788876 5210 012222
Q ss_pred ------CCCccEEEEEEccCCCEEEEee----CCCeEEEEeccCCCCCCCCCCCCCCCceEEE--EEE--eccccccE--
Q psy14815 223 ------SHTSTVWSLAFDRIGSRLATCS----DDATVKIWKEYKPGNSAGIPTPDNDSVWKCV--CTL--SGHHGRTI-- 286 (479)
Q Consensus 223 ------~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~i-- 286 (479)
+|...+..++|+|||+.++... .+..|++||+..+... +.+. ..+ .++ ...|
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~-----------~~~~~~~~l~~~~~-~~~v~~ 318 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGR-----------WNCLVARQHIEMST-TGWVGR 318 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTE-----------EEECGGGCEEEECS-SSCSSS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccc-----------cceeEEEEeeeccC-CceEcc
Confidence 3778899999999999666543 2347999998765410 0000 001 222 3333
Q ss_pred ---EEEEecCCCCeEE-EEeC-C--CeEEEcccCCCC
Q psy14815 287 ---YDISWCHLTDLIA-TACG-D--DAIRIFKENPEA 316 (479)
Q Consensus 287 ---~~l~~~~~~~~l~-~~~~-d--g~i~vw~~~~~~ 316 (479)
....|+|||+.|+ ..+. + ..|++|+...++
T Consensus 319 ~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 319 FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 3678999999876 6654 3 458888887765
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=2e-14 Score=134.42 Aligned_cols=223 Identities=11% Similarity=0.099 Sum_probs=148.2
Q ss_pred cceEEEEECCCCCeEEEeeCC---Cc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 12 GRVWNVSWNPQGTMISSCGED---KN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~d---g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..+.+++|||||++|+.++.+ +. |.+|++.+++....
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-------------------------------------- 100 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI-------------------------------------- 100 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE--------------------------------------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE--------------------------------------
Confidence 457789999999999887653 33 55566554332111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECC---------------------------CeEEEEECCCCeEEEeEEEeCCCCcEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFD---------------------------ATTAVWDKRSGQFECNATLEGHENEVKS 139 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~ 139 (479)
..+.. +..++|+|+++.|+.++.+ ..|.+||+.+++. ...+.. . .+..
T Consensus 101 ~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~-~-~~~~ 175 (347)
T 2gop_A 101 LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK-P-RFSS 175 (347)
T ss_dssp EEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEEE-E-TTCE
T ss_pred EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC-C-Cccc
Confidence 11223 8899999999999888642 5799999998874 122222 2 6789
Q ss_pred EEEcCCCCEEEEEeCCC-------cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC--------CcEE
Q psy14815 140 VTWSKNGQFLATCSRDK-------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------DTVK 204 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~ 204 (479)
+.|+|+| +++++..++ ...+|.+.++ . ...+..+ ..+..+ +|+|+.|+.++.+ ..|.
T Consensus 176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~---~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~ 247 (347)
T 2gop_A 176 GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-K---EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLY 247 (347)
T ss_dssp EEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-E---EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEE
T ss_pred ccCCCCe-EEEEEecccccccccccccEEEeCCC-c---eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEE
Confidence 9999999 877776542 4456655532 2 2223333 444444 9999988887754 3677
Q ss_pred EEecCCcccceEeeeeecCCCccEEE-EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWS-LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
+|| +++. ......+...+.. +.|+ ++ .+++++.++.+++| +. ... . ..+..+ .
T Consensus 248 ~~d--~~~~----~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g~--------------~-~~~~~~-~ 301 (347)
T 2gop_A 248 IYD--GKEV----MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-DGE--------------I-KPIAKG-R 301 (347)
T ss_dssp EEC--SSCE----EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-SSS--------------E-EEEECS-S
T ss_pred EEC--CCce----EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-CCc--------------e-EEEecC-C
Confidence 787 3321 2233456677886 9999 88 88899999999999 86 211 1 222333 5
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeE-EEcccC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAI-RIFKEN 313 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i-~vw~~~ 313 (479)
..|.+++|+| .++++++.++.. .+|.++
T Consensus 302 ~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 302 HWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 6899999999 677777777654 777665
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1.7e-14 Score=129.89 Aligned_cols=240 Identities=11% Similarity=0.059 Sum_probs=165.8
Q ss_pred ceEEEEECCCCCeEE-EeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 13 RVWNVSWNPQGTMIS-SCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
...+++++++|++++ +.+.++.|.+||..+..... + ...+..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~------------------------------------~~~~~~ 67 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-L------------------------------------PFNGLY 67 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-C------------------------------------CCCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-E------------------------------------eeCCcC
Confidence 778999999999777 54678899999864332110 0 012234
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
.+.+++++++++++++.. ++.|.+||..+... ..+. .....+.+++++++++.+++...++.|.+|+..+...
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-- 141 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-- 141 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCSCC---EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCceE---eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--
Confidence 567899999998666655 88999999877642 2222 2235689999999998777777788999997554321
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
..........+.+++++++++++++...++.|.+||...... ......+...+.+++++++|..+++...++.|.
T Consensus 142 -~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 142 -TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ----VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp -EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE----EECCCSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred -EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce----EeecccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence 111122234578899999999777777788999999876542 112223336788999999997777777788999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|+...... ..........+.+++++++|+++++...++.|++++....+
T Consensus 217 ~~~~~~~~~----------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 217 KLLAGSTTS----------------TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCSCC----------------EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEcCCCCcc----------------eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 999743211 11111113568899999999988888899999999987765
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=1.5e-12 Score=118.73 Aligned_cols=271 Identities=8% Similarity=-0.020 Sum_probs=185.1
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+..+...+.+++++++|+++++...++.|.+||.. ++. ..+ ..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~-----------------------------------~~ 52 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEY-----------------------------------PL 52 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEE-----------------------------------EC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEe-----------------------------------cC
Confidence 44566789999999999988877668889999865 321 111 01
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
......+.++++.+++.+.++...++.|..||.. ++. ....+......+.++++.++++++++...++.|..||. ++
T Consensus 53 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 53 PTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred CcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC
Confidence 1234678899999999888877778899999986 432 22223334567899999999987777777889999998 43
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
.. . ..........+..++++++++++++...++.|..||. ++.. . ..........+..++++++++.+++...+
T Consensus 130 ~~-~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 203 (299)
T 2z2n_A 130 KI-R-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI--T-EFKIPTPASGPVGITKGNDDALWFVEIIG 203 (299)
T ss_dssp CE-E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CE-E-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE--E-EeeCCCCCCcceeEEECCCCCEEEEccCC
Confidence 21 1 1112223456889999999988777767789999998 4432 1 11233345668899999999877766668
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
+.|.+||. .... .. ..... ....+.+++++++|.++++...++.|..|+.. +. .
T Consensus 204 ~~i~~~~~-~g~~-------------~~-~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~---------~ 257 (299)
T 2z2n_A 204 NKIGRITT-SGEI-------------TE-FKIPT-PNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI---------I 257 (299)
T ss_dssp TEEEEECT-TCCE-------------EE-EECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE---------E
T ss_pred ceEEEECC-CCcE-------------EE-EECCC-CCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc---------e
Confidence 88999986 2210 11 11222 24578899999999877776678899999983 32 1
Q ss_pred EeccccccccceeEEEecCCCCCC
Q psy14815 327 VHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.......+...+.++++ +++...
T Consensus 258 ~~~~~~~~~~~~~~i~~-~~g~l~ 280 (299)
T 2z2n_A 258 EEYPIQIKSAEPHGICF-DGETIW 280 (299)
T ss_dssp EEEECSSSSCCEEEEEE-CSSCEE
T ss_pred EEEeCCCCCCccceEEe-cCCCEE
Confidence 11112234467888888 777654
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=4.5e-14 Score=145.22 Aligned_cols=234 Identities=11% Similarity=0.055 Sum_probs=159.6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCC-----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
++...+..++|||||++|+.+..++ .|++||+.+++.... .+.. ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cccC--cccceEEEEeCCCEEEEEEECCcccccc
Confidence 3445788999999999998876543 899999999974432 2221 22568999999999999988766
Q ss_pred -----------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEc-----CCcEEEEecCC------cccc
Q psy14815 158 -----------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDK------AEAD 214 (479)
Q Consensus 158 -----------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~~~ 214 (479)
|++|++.++... ..+.....+...+..+.|+|+|++|+.++. +..|.+||+.+ +..
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~- 277 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL- 277 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-
Confidence 999999876421 122222234555788999999999988775 56899999976 321
Q ss_pred eEeeeeecCCCccEEEEEEccCCCEEEEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEE
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDI 289 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l 289 (479)
....+..+...+.. .|+++|+.|+..+.+ +.|.+||+..+.. ..+ ..+..+.. ..+..+
T Consensus 278 --~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----------~~~---~~l~~~~~~~~~~~~ 341 (710)
T 2xdw_A 278 --KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE----------SKW---KVLVPEHEKDVLEWV 341 (710)
T ss_dssp --CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGC---EEEECCCSSCEEEEE
T ss_pred --ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------ccc---eeccCCCCCCeEEEE
Confidence 13334445555544 488899888766543 3699999754421 012 22333323 368889
Q ss_pred EecCCCCeEEEEeCCCe--EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 290 SWCHLTDLIATACGDDA--IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~--i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|++++.++++...|+. |++|++.+++ ....+ ..+.+.+..++++|+++.+.
T Consensus 342 ~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---------~~~~l-~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 342 ACVRSNFLVLCYLHDVKNTLQLHDLATGA---------LLKIF-PLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTTCC---------EEEEE-CCCSSEEEEEECCTTCSEEE
T ss_pred EEEcCCEEEEEEEECCEEEEEEEECCCCC---------EEEec-CCCCceEEEEecCCCCCEEE
Confidence 99988888888888885 5556664554 22332 34567788999999987663
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=4.2e-14 Score=131.26 Aligned_cols=229 Identities=11% Similarity=0.082 Sum_probs=161.4
Q ss_pred cCCcEEEEEECCCCCEEEEEECC------------------------CeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD------------------------ATTAVWDKRSGQFECNATLE-GHENEVKSVTWS 143 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d------------------------g~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~ 143 (479)
.-..+.+++++|+|+++++...+ +.|.+||..+++. ...+. .+-.....++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--LQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--EEEECTTTCSSEEEEEEC
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--EeccCCCccCCceEEEEC
Confidence 34689999999999999888777 4799999988873 33333 344578999999
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeee---------eccccceeEEEEec-CCCEEEEEE-cCCcEEEEecCCcc
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVI---------NAHIQDVKKVRFHP-FDNILASAS-YDDTVKLFKEDKAE 212 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~~~~-~dg~i~i~d~~~~~ 212 (479)
++|+++++...++.|++||..... ..+..+ ..+......++++| +++++++.+ .++.|++||.. +.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GK 176 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SC
T ss_pred CCCCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CC
Confidence 999988888888999999986542 122222 23334678999999 788888876 68999999954 32
Q ss_pred cceEeeeeec----------CCCccEEEEEEccC-CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 213 ADWINFATLK----------SHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 213 ~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
. +..+. .+......++++|+ +..+++...++.|++||...+ +.+..+...
T Consensus 177 ~----~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------------~~~~~~~~~ 237 (329)
T 3fvz_A 177 F----VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------------EFVREIKHA 237 (329)
T ss_dssp E----EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------------CEEEEECCT
T ss_pred E----EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------------cEEEEEecc
Confidence 2 22222 12234789999998 666677778899999997422 334444321
Q ss_pred -ccccEEEEEecC------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc--cccccceeEEEecCCCCCC
Q psy14815 282 -HGRTIYDISWCH------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 282 -~~~~i~~l~~~~------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~~~~l 350 (479)
....+..++|+| ++..+++...+..|++|+..+++ ++..+. .++...+..++++|+|..+
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---------~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---------IIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC---------EEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---------EEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 256788899999 33333334445689999998887 333321 3566778999999999543
No 188
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=9e-14 Score=126.26 Aligned_cols=228 Identities=9% Similarity=0.094 Sum_probs=158.8
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe------CCCCcEEEEEEc-CCCCEEEEEeC-CCcE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE------GHENEVKSVTWS-KNGQFLATCSR-DKSV 158 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~l~~~-~~~~~l~~~~~-dg~i 158 (479)
.++-..+.++++++++.++++...++.|.+||.... ....+. .+...+.++++. ++++++++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 355678999999999998888888999999998743 233332 234578899994 66665555533 7899
Q ss_pred EEEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCccEEEEEEcc
Q psy14815 159 WVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVWSLAFDR 235 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ 235 (479)
.+||. +++ ....+. .+...+.+++++|+++++++...++.|.+||..... ...+ ..+...+..+++++
T Consensus 103 ~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 103 QIYNQ-YGQ---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV-----LHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp EEECT-TSC---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-----EEEEECTTTCSSEEEEEECS
T ss_pred EEECC-CCc---EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE-----EEEeCCCCccCCcEEEEECC
Confidence 99994 432 222232 233567899999999988887788999999965321 2222 24456789999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeCCC-eEEEcccC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIFKEN 313 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~dg-~i~vw~~~ 313 (479)
+++.+++.+.++.|++||... ..+..+... ....+..++++++|.++++...++ .|.+|+..
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCEEEEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 998888777889999999621 223344332 125688999999999888888776 99999964
Q ss_pred CCCCCCCceeeEEEecccc-ccccceeEEEecCCCCCCCc
Q psy14815 314 PEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~ 352 (479)
... +..+.. .....+.+++++|+|+.+..
T Consensus 238 g~~----------~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 238 GQL----------ISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp SCE----------EEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CCE----------EEEEcccCCCCcceeEEECCCCcEEEE
Confidence 322 222211 12234778999999975543
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=5.6e-14 Score=128.33 Aligned_cols=230 Identities=11% Similarity=0.038 Sum_probs=158.3
Q ss_pred ccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.+.....+++|+|+++ +++++..++.|..||..++ . ..+..+...+.+++++++|+++++...++.|.+||..++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 3456778999999998 7788888999999999877 2 344456678999999999998777766789999999766
Q ss_pred Cceeeeeeeec-cccceeEEEEecCCCEEEEE----Ec-------------CCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 167 DEYECAAVINA-HIQDVKKVRFHPFDNILASA----SY-------------DDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 167 ~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~----~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
+.......... ....+..++++|+|+++++. +. .+.|..++.. +. ...+..+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~ 174 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKP 174 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEeecCCCCC
Confidence 42211111111 12346789999999988873 31 3456556554 22 22334455677
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCce-EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW-KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
..++|+|+++.+++.+.++.|.+|++..... . .....+.. ....+..++++++|.++++. ++.|
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~------------~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGE------------TEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSC------------EEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCc------------CcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeE
Confidence 8999999999987777889999999852211 1 11222222 24567789999999877666 7899
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEe-cCCCCCCCccc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPEPQKTN 354 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-sp~~~~l~~~~ 354 (479)
.+|+.+ ++ .+..+ ..+.. +++++| +|+++.|..+.
T Consensus 240 ~~~~~~-g~---------~~~~~-~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 240 HVLTPD-GD---------ELGRV-LTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEECTT-SC---------EEEEE-ECSSC-CCEEEEESTTSCEEEEEE
T ss_pred EEECCC-CC---------EEEEE-ECCCC-ceeEEEECCCCCEEEEEc
Confidence 999987 43 23322 34445 899999 68888775543
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=2.5e-14 Score=134.36 Aligned_cols=227 Identities=10% Similarity=-0.022 Sum_probs=148.1
Q ss_pred EEEECCCCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCCCCEEEEEeC--CC
Q psy14815 95 ETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKNGQFLATCSR--DK 156 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~~~~~--dg 156 (479)
.++|+|++++++++.. ++.|.+||..+++. +..+.. +......++++|||++|+++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 8999999999999863 57899999998863 333332 1245678999999999999874 57
Q ss_pred cEEEEEeCCCCceeeeee-eeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEee---eeecCCCccEEEE
Q psy14815 157 SVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINF---ATLKSHTSTVWSL 231 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~~~~v~~~ 231 (479)
.|.+||+.+. +.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+........... ..+.....++ .+
T Consensus 132 ~v~v~d~~~~---~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~ 205 (361)
T 2oiz_A 132 SIGIVDVAKG---DYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FI 205 (361)
T ss_dssp EEEEEETTTT---EEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CS
T ss_pred eEEEEECCCC---cEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EE
Confidence 8999999987 33333 221 1 12335667765 678888999999999986522111011 1122222222 23
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------c---cccEEEEEecCCCCeEEEEe
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------H---GRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~i~~l~~~~~~~~l~~~~ 302 (479)
.+++++..++..+.++.|.++|+..... .....+... . ......++|+|+++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~~~v~v~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~ 272 (361)
T 2oiz_A 206 APALDKDKAHFVSYYGNVYSADFSGDEV-------------KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFM 272 (361)
T ss_dssp CCEECSSEEEEEBTTSEEEEEECSSSSC-------------EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEE
T ss_pred EecccCCEEEEEeCCCeEEEEEecCCCc-------------eecccccccCccccccccccCCeeEEEEecCCCeEEEEE
Confidence 3467777777788899999999853321 111211110 0 01112378999988777664
Q ss_pred C-----------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 303 G-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 303 ~-----------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++.|.+||+.+++ .+..+. .+. +.+++|+|||++|....
T Consensus 273 ~~~~~~~~~~~~~~~v~viD~~t~~---------~v~~i~-~~~--p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 273 HPDGKEGTHKFPAAEIWVMDTKTKQ---------RVARIP-GRD--ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp ESSCCTTCTTCCCSEEEEEETTTTE---------EEEEEE-CTT--CCEEEEETTTTEEEEEC
T ss_pred ccCCCcccccCCCceEEEEECCCCc---------EEEEEe-cCC--eeEEEECCCCCEEEEeC
Confidence 3 3589999999987 444443 444 99999999999887554
No 191
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=8.3e-15 Score=149.68 Aligned_cols=233 Identities=10% Similarity=-0.012 Sum_probs=157.7
Q ss_pred cccCCcEEEEEECCCCCEEEEE--ECCCeEEEEECCCCeEEEeEEEeCCCCcEE---------EEEEc--CCCCE-EEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWS--KNGQF-LATC 152 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~---------~l~~~--~~~~~-l~~~ 152 (479)
.+|...+..++|++++-++++. +.++...||....+. ....+..+...+. ...|+ |||+. |+.+
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 4678899999999887666666 557899999854332 2345555655555 56666 99998 7665
Q ss_pred eC-CCcEEEEEeC--C-CCceeeeeeeec-----cccceeEEEEecCCCEEEEEEcC----------CcEEEEecCC---
Q psy14815 153 SR-DKSVWVWEVG--E-EDEYECAAVINA-----HIQDVKKVRFHPFDNILASASYD----------DTVKLFKEDK--- 210 (479)
Q Consensus 153 ~~-dg~i~vwd~~--~-~~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~~~~~d----------g~i~i~d~~~--- 210 (479)
+. +..|.++++. + +. . ..+.. |...+.+++|+|+|+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-P---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-C---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred ECCCCeEEEEcCCCCCCCC-C---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 54 4556666655 2 32 1 22333 56678899999999999998877 5899999987
Q ss_pred ---cccceEeeeeec-CCCccEEEEEEccCCCEEEEeeCC--------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEE
Q psy14815 211 ---AEADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDD--------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 211 ---~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (479)
+.. ..+. .+...+..++|+|||++|+.++.+ ..|++||+..... ......+
T Consensus 174 ~~~~~~-----~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------------~~~~~~l 236 (662)
T 3azo_A 174 ADRSAV-----RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------------FADTRTL 236 (662)
T ss_dssp TCGGGS-----EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------------EEEEEEE
T ss_pred ccCCce-----eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------------ccccEEe
Confidence 432 3344 556678889999999999887754 3799999852110 0112333
Q ss_pred eccccccEEEEEecCCCCeEEEEeCCC--eEEEcccCCCCCCCCceeeEEEeccccccccc--------eeEEEecCCCC
Q psy14815 279 SGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD--------VNCVAWNPVVP 348 (479)
Q Consensus 279 ~~~~~~~i~~l~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~--------v~~~~~sp~~~ 348 (479)
...+...+..++|+|||+++++++.++ .|.+|+..+++ ...+...+... +..++|+|+++
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~----------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA----------ATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC----------EEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc----------eeecccccccccCccccccCceEeEeCCCE
Confidence 333356899999999999888888888 56666665554 33333333222 56788888887
Q ss_pred CCCc
Q psy14815 349 EPQK 352 (479)
Q Consensus 349 ~l~~ 352 (479)
+++.
T Consensus 307 ~~~~ 310 (662)
T 3azo_A 307 IAVV 310 (662)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
No 192
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=99.65 E-value=3.7e-16 Score=131.03 Aligned_cols=70 Identities=23% Similarity=0.259 Sum_probs=65.3
Q ss_pred ccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccc
Q psy14815 353 TNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPL 428 (479)
Q Consensus 353 ~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~ 428 (479)
+++++.++.+.+++.+| ++++||++|+++ .+ ++|+++++++|+|++++++|++.|||+||||||++|.+.
T Consensus 5 ~~m~~~~I~~~~~e~ap--lae~~dd~Gllv--~~--~eV~kIlvaLD~t~~vv~eA~~~g~dlIItHHP~~~~~~ 74 (278)
T 3rxy_A 5 AGLSTAELVDIALEMAE--MRTLPADSAVYV--ES--TDLKRVMMGIDIGPAELLLARQLGCDGVIAHHPAGGSAT 74 (278)
T ss_dssp CCBCHHHHHHHHHHHTT--CSSCCTTCEEEE--CC--SCBSEEEEESSCCHHHHHHHHHTTCSEEEESSCCSHHHH
T ss_pred ccCcHHHHHHHHHHhcC--cccCCCCceeee--cc--ccccEEEEEECCCHHHHHHHHHcCCCEEEECCCcchhhh
Confidence 45789999999999999 999999999999 43 799999999999999999999999999999999999943
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=4e-15 Score=141.80 Aligned_cols=254 Identities=11% Similarity=0.053 Sum_probs=155.8
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
..+.|+|||++|+.++.++.|.+||+.+++.......... ...++...++.... ..... ...
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~~~~~~-----~~~~~-------~~~ 145 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVANSDCT-----KLVGI-------EIL 145 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEECTTSS-----EEEEE-------EEE
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEEeccCC-----ccccc-------ccc
Confidence 3478999999999999888999999987765433321111 11111111111000 00000 001
Q ss_pred EEEECCCCCEEEEE-----ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCC------CcEEEEE
Q psy14815 95 ETAWSPCGNFIASA-----SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRD------KSVWVWE 162 (479)
Q Consensus 95 ~v~~~~~~~~l~t~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~vwd 162 (479)
.+.|+|+++.++.+ ..+..|.+||+.+++...+. .+...+..+.|+| +++.|+..+.+ ..|.+||
T Consensus 146 ~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 146 KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 24578888877665 35678999999988643332 3566789999999 78877766553 3588888
Q ss_pred eCCCCceeeeeeeecc--ccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 163 VGEEDEYECAAVINAH--IQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
+..... . .+..+ ...+..++|+|+|+.|+.++.+ +.|++||+.++.. ..+..... .. +.|+|
T Consensus 223 ~~~~~~-~---~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~----~~-~~~s~ 291 (396)
T 3c5m_A 223 EDGSNV-R---KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMPP----CS-HLMSN 291 (396)
T ss_dssp TTSCCC-E---ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECCS----EE-EEEEC
T ss_pred CCCCce-e---EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe--EEeeeCCC----CC-CCccC
Confidence 866432 1 12222 2357889999999988777654 4499999987653 22222222 23 88999
Q ss_pred -CCCEEEEee----------------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc----------cEEE
Q psy14815 236 -IGSRLATCS----------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR----------TIYD 288 (479)
Q Consensus 236 -~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~ 288 (479)
+|+++++++ .++.|++||+..... ..+..+... .+..
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~----------------~~l~~~~~~~~~~~~~~~~~~~~ 355 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA----------------QKLCKHSTSWDVLDGDRQITHPH 355 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC----------------CEEEECCCCCCCBTTBSSTTCCC
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce----------------EEccCCCCccccccccccCCCCC
Confidence 999888754 347899999754321 112222111 2566
Q ss_pred EEecCCCCeEEEEeC-CCeEEEc--ccCCCC
Q psy14815 289 ISWCHLTDLIATACG-DDAIRIF--KENPEA 316 (479)
Q Consensus 289 l~~~~~~~~l~~~~~-dg~i~vw--~~~~~~ 316 (479)
++|+|+|+.|+.++. ++...+| ++..+.
T Consensus 356 ~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 356 PSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred ceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 789999998877765 4555555 444443
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=4.2e-14 Score=146.10 Aligned_cols=250 Identities=10% Similarity=0.023 Sum_probs=162.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCC-----CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGED-----KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||.++.+ .+|++||+.+++.+...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---------------------------------- 205 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---------------------------------- 205 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE----------------------------------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc----------------------------------
Confidence 344578899999999999887643 35999998877643210
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe--------------EEEEECCCCeEEEeEEEe--CCCCcEEEEEEcCCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT--------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKNGQ 147 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~--------------i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~ 147 (479)
.+...+..++|+|| +.|+.++.++. |++|++.+++......+. .+...+.++.|+|||+
T Consensus 206 ----~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 206 ----LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp ----EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC
T ss_pred ----CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC
Confidence 01112346889999 99988887654 899999877522222333 2334588999999999
Q ss_pred EEEEEeCCC-----cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEee
Q psy14815 148 FLATCSRDK-----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 148 ~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~ 218 (479)
+|+..+.++ .|.+||+.++.. .....+..+....... ++|+++.|+..+.+ +.|.+||+.++...+ .
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~ 356 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNGKI-GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF--D 356 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETTEE-CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE--E
T ss_pred EEEEEEEccCCCcceEEEEECCCCCC-cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc--E
Confidence 988877654 799999987511 1023344444444444 34888888887753 459999987642111 2
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
..+..+...+..+.++ ++..+++...|+..++|.+.... .....+.......+..++++|+++.+
T Consensus 357 ~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g--------------~~~~~l~~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 357 TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG--------------KPAGAVSLPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS--------------CEEEECBCSSSCEEEEEECCBTCSCE
T ss_pred EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC--------------CceeeccCCCCeEEEEeecCCCCCEE
Confidence 2234455567778887 56677888889988888764211 22344443335678899999998866
Q ss_pred EEE----eCCCeEEEcccCCCC
Q psy14815 299 ATA----CGDDAIRIFKENPEA 316 (479)
Q Consensus 299 ~~~----~~dg~i~vw~~~~~~ 316 (479)
+.. ...++|++||+.+++
T Consensus 422 ~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEcCCCCCCEEEEEECCCCc
Confidence 533 234789999987754
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=1.4e-12 Score=128.90 Aligned_cols=291 Identities=11% Similarity=0.089 Sum_probs=186.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+ ...
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i--------------------------------------~~G 239 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI--------------------------------------KIG 239 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE--------------------------------------ECC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE--------------------------------------ecC
Confidence 56789999999999999999999999984 44433222 112
Q ss_pred CcEEEEEEC----CCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeC--------C-CCcEEEEEEcCCCCEE-EEEeCC
Q psy14815 91 RTIRETAWS----PCGNFIASASF-DATTAVWDKRSGQFECNATLEG--------H-ENEVKSVTWSKNGQFL-ATCSRD 155 (479)
Q Consensus 91 ~~v~~v~~~----~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~--------~-~~~v~~l~~~~~~~~l-~~~~~d 155 (479)
.....++|+ |||++++++.. +++|.++|..+.+........+ | ...+..+..++++..+ +....+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 345789999 69999888766 5899999998887433222211 1 2267888888876654 444557
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeee-eecCCCccEEEEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAF 233 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~v~~~~~ 233 (479)
|.|.++|....+... +..+ ........+.|+|++++++++. .++.|.++|..+++.....-. ....|.+.-..+ +
T Consensus 320 g~v~~vd~~~~~~~~-v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~ 396 (567)
T 1qks_A 320 GKILLVDYTDLNNLK-TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-V 396 (567)
T ss_dssp TEEEEEETTCSSEEE-EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-E
T ss_pred CeEEEEecCCCccce-eeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-E
Confidence 999999987754322 2222 2234467889999999887766 578899999997764211111 112344322222 5
Q ss_pred ccCCCEEE-Eee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC-------C
Q psy14815 234 DRIGSRLA-TCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------D 304 (479)
Q Consensus 234 ~~~~~~l~-s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-------d 304 (479)
+|++..++ ++. .++.|.++|....... ...|+.+.++... +..-..+..+|+++++.+... .
T Consensus 397 ~p~~g~v~~t~~~g~~~Vsvid~~~~~~~--------~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 397 HPTFGPVWATSHMGDDSVALIGTDPEGHP--------DNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred CCCCCcEEEeCCCCCCeEEEecCCCCCCc--------cccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 78755554 443 4689999998653221 2346777887764 334455789999998888663 4
Q ss_pred CeEEEcccCCCCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCcc
Q psy14815 305 DAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 305 g~i~vw~~~~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
++|.++|+.+.+.......++.+.. -+..-...+..+.|+|+|+.+-.+
T Consensus 468 ~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 468 GSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp TCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence 6999999987621000011222211 011123578899999999987544
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=2.2e-14 Score=147.11 Aligned_cols=234 Identities=12% Similarity=0.049 Sum_probs=154.0
Q ss_pred ccCCcEEEEEECCCCCEEEEE-----ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASA-----SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
+|...+..++|||||++|+.+ +.+..|++||+.+++......+... ....++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence 456678999999999999843 4456899999999863201111111 1268999999999999988776
Q ss_pred --------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEcCC----cEEEEecCCcccceEeeeeecCC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
|++|++.++... ..+.....+...+.++.|+|+|++|+.++.++ .|.+++..++. ...+..+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~ 270 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-----FRLLVKG 270 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-----CEEEEEC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-----eEEeecC
Confidence 999999876421 23333334556788999999999998887666 56777654333 2333344
Q ss_pred CccEEEEEEccCCCEEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 225 TSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
...+....+ +++++++... .++.|.+||+..+.. ..+..+ +..+....+..++|+ ++.++++.
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~----------~~~~~l--~~~~~~~~l~~~~~~-~~~lv~~~ 336 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR----------ASWKEI--VPEDSSASLLSVSIV-GGHLSLEY 336 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG----------GGCEEE--ECCCSSCEEEEEEEE-TTEEEEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc----------cCCeEE--ecCCCCCeEEEEEEE-CCEEEEEE
Confidence 455556666 5666444433 257899999854421 111211 222224568888888 67788999
Q ss_pred eCCCeEEEcccCC-CCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 302 CGDDAIRIFKENP-EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 302 ~~dg~i~vw~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
..|+..++|.++. ++ ....+.....+.+..++++|+++.+.
T Consensus 337 ~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 337 LKDATSEVRVATLKGK---------PVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp EETTEEEEEEEETTCC---------EEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred EECCEEEEEEEeCCCC---------eeEEecCCCCeEEEEeecCCCCCEEE
Confidence 9999988887653 22 23333222356788889999987764
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=7.3e-13 Score=119.15 Aligned_cols=217 Identities=11% Similarity=0.063 Sum_probs=154.3
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC-CcEEEEEECC
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSP 100 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~ 100 (479)
.+++|++++.|+.|.+||.++++.+.++. .+. ..+.++.++|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~-------------------------------------~~~~~~~~~~~~~p 46 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYP-------------------------------------LEKGWECNSVAATK 46 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEE-------------------------------------CCTTCCCCEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeC-------------------------------------CCccCCCcCeEECC
Confidence 46789999999999999988888765442 122 3577889999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCCCceeeeee---e
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAV---I 175 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~---~ 175 (479)
+|++++ +.++.|..||. +++ .+..+..+ ...+.++.+.++|+.+++.+. ++.+..+|.. ++....... .
T Consensus 47 dG~ilv--s~~~~V~~~d~-~G~--~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~ 120 (276)
T 3no2_A 47 AGEILF--SYSKGAKMITR-DGR--ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGI 120 (276)
T ss_dssp TSCEEE--ECBSEEEEECT-TSC--EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSC
T ss_pred CCCEEE--eCCCCEEEECC-CCC--EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCC
Confidence 999888 45788999999 676 45566654 357889999999999999887 7777777753 322111111 0
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
..+......+++.++|+++++...++.|..||.. ++..| ++... ..+.++...++++.+++++.++.|..+|..
T Consensus 121 ~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w----~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 121 ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN----SVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE----EEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE----EEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 1222345567789999999999999999999988 66533 33322 344567788999999999888899999974
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEe
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~ 302 (479)
++ +.+-++... .-..+..+...++|.++++..
T Consensus 195 tG---------------~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 195 SN---------------RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp TC---------------CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CC---------------cEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 33 334444322 122377888889998887764
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1.7e-11 Score=111.67 Aligned_cols=269 Identities=7% Similarity=-0.007 Sum_probs=181.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.....+.+++++++|++.++...++.|.+||.. ++.. .+ ....
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~-----------------------------------~~~~ 59 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EF-----------------------------------EVPT 59 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE-----------------------------------ECSS
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EE-----------------------------------ECCC
Confidence 345678999999999988877778899999865 3211 11 0112
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....+.++++.+++.+.++...++.|..+|.. ++.. ..........+.++++.++++++++...++.|..+|.. ++.
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 34578899999999877777667899999988 6532 22333344678999999999877777668889999887 321
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
. ...+......+.++++.+++++.++...++.|..||. .+.. . ......+...+..++++++++..++....+.
T Consensus 137 -~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 210 (300)
T 2qc5_A 137 -Y-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL--E-EYPLPTNAAAPVGITSGNDGALWFVEIMGNK 210 (300)
T ss_dssp -E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -E-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE--E-EeeCCCCCCCcceEEECCCCCEEEEccCCCE
Confidence 1 1112223456889999999997666666788999998 3332 1 1223334567889999999987776666778
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
|.+||. .... . ....... ...+.++++++++.++++...++.|..|+.. +. ...
T Consensus 211 i~~~~~-~g~~-------------~-~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~---------~~~ 264 (300)
T 2qc5_A 211 IGRITT-TGEI-------------S-EYDIPTP-NARPHAITAGKNSEIWFTEWGANQIGRITND-NT---------IQE 264 (300)
T ss_dssp EEEECT-TCCE-------------E-EEECSST-TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC---------EEE
T ss_pred EEEEcC-CCcE-------------E-EEECCCC-CCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc---------EEE
Confidence 999986 1110 1 1112222 4568899999999877777677899999983 33 111
Q ss_pred ccccccccceeEEEecCCCCC
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~ 349 (479)
.........+.+++++++|..
T Consensus 265 ~~~~~~~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 265 YQLQTENAEPHGITFGKDGSV 285 (300)
T ss_dssp EECCSTTCCCCCEEECTTSCE
T ss_pred EECCccCCccceeEeCCCCCE
Confidence 111223345778888888764
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=3.7e-12 Score=125.87 Aligned_cols=268 Identities=12% Similarity=0.084 Sum_probs=172.3
Q ss_pred CCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC
Q psy14815 21 PQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 100 (479)
Q Consensus 21 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 100 (479)
|.+.++++...+++|.++|..+++.+..+ .....+..+.|+|
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i--------------------------------------~~g~~p~~v~~Sp 206 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVL--------------------------------------DTGYAVHISRLSA 206 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEE--------------------------------------ECSSCEEEEEECT
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEE--------------------------------------eCCCCccceEECC
Confidence 33445666677888888888777665443 1233566899999
Q ss_pred CCCEEEEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEc----CCCCEEEEEeC-CCcEEEEEeCCCCceeeee
Q psy14815 101 CGNFIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWS----KNGQFLATCSR-DKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~ 173 (479)
|++++++++.|+.|.+||+. +++ .+..+... .....++|+ |||+++++++. ++++.++|..+.+....+.
T Consensus 207 DGr~lyv~~~dg~V~viD~~~~t~~--~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 207 SGRYLFVIGRDGKVNMIDLWMKEPT--TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp TSCEEEEEETTSEEEEEETTSSSCC--EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCCc--EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 99999999999999999996 665 44555543 356799999 69998888766 5899999988875443332
Q ss_pred eee-------cccc-ceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 174 VIN-------AHIQ-DVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 174 ~~~-------~~~~-~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
... .|.. .+..+..++++.. ++....+|.|.++|...... ..+..+ ........+.|+|++++++++.
T Consensus 284 ~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~--~~v~~i-~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 284 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN--LKTTEI-SAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp CCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE--EEEEEE-ECCSSEEEEEECTTSCEEEEEE
T ss_pred ccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc--ceeeee-eccccccCceECCCCCEEEEEe
Confidence 211 1222 5778888887654 44455679999999876442 112222 2334567889999999987655
Q ss_pred -CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-----cccccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCC
Q psy14815 245 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 245 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~ 316 (479)
.++.|.++|+... +.+..+.. |.+..+. + ++|++. +++++. .++.|.+++..+.+
T Consensus 361 ~~sn~V~ViD~~t~---------------kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 361 NARNKLVVIDTKEG---------------KLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp GGGTEEEEEETTTT---------------EEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred CCCCeEEEEECCCC---------------cEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 5788999998543 33333332 1112222 2 578744 445543 46899999998743
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
... ..+..+..+. .....-..+..+|++++|..
T Consensus 424 ~~~--~~~kvv~~i~-~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 424 HPD--NAWKILDSFP-ALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp CTT--TBTSEEEEEE-CSCSCCCCEECCTTCSEEEE
T ss_pred Ccc--ccCEEEEEEe-cCCCCCEEEEeCCCCCeEEE
Confidence 211 1122333332 22223344778999987743
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=3e-12 Score=118.56 Aligned_cols=236 Identities=4% Similarity=-0.017 Sum_probs=155.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
....+.+. +++++++...++.|.+||..+++.+..+ .....
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i--------------------------------------~~~~~ 85 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI--------------------------------------TGFTS 85 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE--------------------------------------ECCSS
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc--------------------------------------CCCCC
Confidence 45667764 3445555556788888888777655443 12356
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-----CcEEEEEEcCCCCEEEEEe--CCCcEEEEEeCC
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-----NEVKSVTWSKNGQFLATCS--RDKSVWVWEVGE 165 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~v~~l~~~~~~~~l~~~~--~dg~i~vwd~~~ 165 (479)
...+++++++...++...++.|.+||..+++.. ..+.... .....+++ ++..++++. .++.|.++|..+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~--~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT--GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE--EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE--EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 788999888854444447899999999998733 3333222 14556777 345566555 488999999998
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----------CcEEEEecCCcccceEeeeeecC-CCccEEEEEEc
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----------DTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFD 234 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 234 (479)
.+ ....+.. ......++++|+|++++++..+ +.|.++|..+.+. ...+.. .......++|+
T Consensus 162 ~~---~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v----~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 162 DK---VVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV----EKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp TE---EEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE----EEEEECCTTCCCEEEEEC
T ss_pred Ce---EEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE----EEEEecCCCCCceeEEEe
Confidence 73 3333332 2335688999999977776654 7899999987653 222221 12367899999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEE----eCCCeEEE
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA----CGDDAIRI 309 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~----~~dg~i~v 309 (479)
|+++.|+++.. .|.+||.......... .+.. .......++++| ++.++++. ..++.|.+
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~-------------~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVEADRVPVRP-------------FLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp TTSCEEEEESS--SEEEEETTCSSCCSSC-------------SBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred cCCCEEEEEcc--EEEEEECCCCceeeee-------------eecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 99999988765 8999998654321100 0011 134678899999 45555555 56899999
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
||.+ ++
T Consensus 298 ~d~~-g~ 303 (328)
T 3dsm_A 298 YSPQ-GK 303 (328)
T ss_dssp ECTT-CC
T ss_pred ECCC-CC
Confidence 9998 65
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=4.2e-12 Score=116.76 Aligned_cols=252 Identities=10% Similarity=0.049 Sum_probs=162.3
Q ss_pred cccccceEEEEECCCCCeEEE-------eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 8 KGHQGRVWNVSWNPQGTMISS-------CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t-------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
...-....+++|+++++++++ +..++.|.+||..+++..... .
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~----------------------~-------- 63 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC----------------------K-------- 63 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE----------------------C--------
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE----------------------e--------
Confidence 344456789999999988888 667888999987655432100 0
Q ss_pred eeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEe-EEEe-C-CCCcEEEEEEcCCCCEEEEEeCC-
Q psy14815 81 AKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECN-ATLE-G-HENEVKSVTWSKNGQFLATCSRD- 155 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~-~-~~~~v~~l~~~~~~~~l~~~~~d- 155 (479)
. ...++...+.+++++++ +++++ ++..+.|.+||.. ++.... .... . ....+.+++++++|+++++...+
T Consensus 64 -~--~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 138 (314)
T 1pjx_A 64 -P--EVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGE 138 (314)
T ss_dssp -C--EETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCB
T ss_pred -c--ccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcc
Confidence 0 00124467889999999 65444 4445589999998 753322 1111 1 12357899999999877776554
Q ss_pred --------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEe----cCCCEEEEE-EcCCcEEEEecC-Ccccc-
Q psy14815 156 --------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH----PFDNILASA-SYDDTVKLFKED-KAEAD- 214 (479)
Q Consensus 156 --------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~- 214 (479)
+.|..||.. + ... .+..+......++++ |+++.++.+ ..++.|.+||.. .+...
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g-~~~---~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-G-QMI---QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-S-CEE---EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccccccccCCCCeEEEECCC-C-CEE---EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 456666554 2 111 122233456789999 999766555 467899999976 22211
Q ss_pred eEeeeeecCCC-ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 215 WINFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 215 ~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
......+..+. ..+..++++++|+.+++...++.|.+||...... +..+..+ ...+.+++|+|
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~---------------~~~~~~~-~~~~~~i~~~~ 277 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP---------------KMRIRCP-FEKPSNLHFKP 277 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC---------------SEEEECS-SSCEEEEEECT
T ss_pred ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE---------------eEEEeCC-CCCceeEEECC
Confidence 11223344443 5678899999998888877888999999743221 2233333 46789999999
Q ss_pred CCCeE-EEEeCCCeEEEcccCCC
Q psy14815 294 LTDLI-ATACGDDAIRIFKENPE 315 (479)
Q Consensus 294 ~~~~l-~~~~~dg~i~vw~~~~~ 315 (479)
+++.| ++...++.|..|++...
T Consensus 278 dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEeCCCCeEEEEeCCCC
Confidence 99944 55556689999988754
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=8.9e-13 Score=136.16 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=151.4
Q ss_pred cCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc------
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS------ 157 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~------ 157 (479)
+...+..++|||||++|+.+..+ ..|++||+.+++.... ... ...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~--~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELK--WVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEE--EEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCC--CceeccEEEECC-CEEEEEEecCccccccc
Confidence 34578899999999999887654 3699999999974322 111 112357899999 98888877654
Q ss_pred --------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++|++.+.... ..+.....+...+..+.|+|+|++|+..+.++ .|.+||+.++... ....+..
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~ 314 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIP 314 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEEC
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecC
Confidence 888998765321 12222223333578999999999988887654 7999999865211 0223333
Q ss_pred CCccEEEEEEccCCCEEEEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+...+.... +|+|+.|+..+.+ +.|.+||+..+. ... ..+..++...+.+++|+ ++.+++
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------------~~~-~~l~~~~~~~l~~~~~~-~~~lv~ 378 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST-------------PRF-DTVVPESKDNLESVGIA-GNRLFA 378 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS-------------CEE-EEEECCCSSEEEEEEEE-BTEEEE
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc-------------ccc-EEEecCCCCeEEEEEEE-CCEEEE
Confidence 444444443 4889988877653 459999974421 011 22223335567788887 667888
Q ss_pred EEeCCCeEEEcccCC-CCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 300 TACGDDAIRIFKENP-EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+...|+..+||.++. ++ ....+...+.+.+..++++|+++.|.
T Consensus 379 ~~~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLDGK---------PAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEEETTEEEEEEEETTSC---------EEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred EEEECCEEEEEEEeCCCC---------ceeeccCCCCeEEEEeecCCCCCEEE
Confidence 888899888886652 22 23333223456788999999998774
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.4e-12 Score=117.23 Aligned_cols=223 Identities=9% Similarity=-0.016 Sum_probs=149.5
Q ss_pred cEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
...++++++++++++ +...++.|.+||..++... .........+.+++++++++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--
Confidence 788999999998777 4467889999998665421 11122335678999999998555554 88999999876522
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
..........+..++++++++++++...++.|.+|+..+... ..........+.+++++++++.+++...++.|.
T Consensus 100 -~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp -EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred -eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 111112224678999999999877777788999997654332 111222334577899999998777777788999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecc
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 330 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~ 330 (479)
+||...... ....... ...+..++++++|.++++...++.|.+|+..... ....
T Consensus 175 ~~~~~~~~~---------------~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~----------~~~~ 228 (270)
T 1rwi_B 175 KLEAESNNQ---------------VVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT----------STVL 228 (270)
T ss_dssp EECTTTCCE---------------EECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC----------CEEC
T ss_pred EEecCCCce---------------EeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc----------ceee
Confidence 999743211 1111111 2568899999999877777778999999987654 1112
Q ss_pred ccccccceeEEEecCCCCCC
Q psy14815 331 HRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 331 ~~~h~~~v~~~~~sp~~~~l 350 (479)
...+...+.+++++|+|...
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEE
T ss_pred ccCCCCCceeEEECCCCCEE
Confidence 22333568899999999743
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=3.2e-11 Score=109.98 Aligned_cols=237 Identities=11% Similarity=0.100 Sum_probs=155.7
Q ss_pred ccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 7 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
+..+..--.+..|+|++ .++++...++.|..||..+++.. .
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~------------------------------------- 49 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-R------------------------------------- 49 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-E-------------------------------------
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-E-------------------------------------
Confidence 33445566788999954 45566667889999987654321 0
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCC--------
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRD-------- 155 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d-------- 155 (479)
......+.+++++++++++++ . ++.|.+||..+++...+..... ....+..++++|+|+++++...+
T Consensus 50 -~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 50 -VTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp -EECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred -EeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 112457889999999995554 4 5789999999887544333221 12357899999999966654322
Q ss_pred -CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecC--Ccccc-eEeeeeecCCCccEEE
Q psy14815 156 -KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKED--KAEAD-WINFATLKSHTSTVWS 230 (479)
Q Consensus 156 -g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~--~~~~~-~~~~~~~~~~~~~v~~ 230 (479)
..-.+|.+....... .+.......+.++|+|+++.|+ +.+.++.|.+|++. ++... ...+..+..+......
T Consensus 127 ~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVK---KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp TTCEEEEEECTTSCEE---EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred CCCcEEEEEECCCCEE---EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 335666665432222 1223334567899999998665 45567889999974 33321 1223333344567789
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEEeC
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 303 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~~~ 303 (479)
++++++|+..++....+.|..||... ++.+..+..+ ...+++++|. |+++.|.+++.
T Consensus 204 ~~~d~~G~lwva~~~~~~v~~~d~~t---------------G~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 204 MCIDAEGKLWVACYNGGRVIRLDPVT---------------GKRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEBTTSCEEEEEETTTEEEEECTTT---------------CCEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred eEECCCCCEEEEEcCCCEEEEEcCCC---------------ceEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 99999998877777788899999632 3445666654 5679999998 88776655544
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=5.5e-11 Score=108.25 Aligned_cols=199 Identities=7% Similarity=-0.058 Sum_probs=137.2
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....+.++++.+++.++++...++.|..||. +++.. ..........+.++++.++++..++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 3457889999999988887777889999998 55432 2223334567899999999987777766789999998 4421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
... ........+.++++++++++.++...++.|..||. ++.. . ......+...+.+++++++|+.+++...++.
T Consensus 174 -~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 174 -TEF-KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--T-EFKIPTPNARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp -EEE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred -EEe-eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE--E-EEECCCCCCCceeEEECCCCCEEEeccCCce
Confidence 111 12233456789999999987777666889999998 4442 1 1223345567899999999986666657789
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..||.. . . +..+ ..+ ...+.++++ +++.++++.+ .+.+..++.++++
T Consensus 248 i~~~d~~-g---------------~-~~~~~~~~~-~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 248 IGRLTSN-N---------------I-IEEYPIQIK-SAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEEETT-T---------------E-EEEEECSSS-SCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred EEEECCC-C---------------c-eEEEeCCCC-CCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 9999962 1 1 1122 222 457899999 8888777655 5677777776543
No 206
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=5.4e-12 Score=116.83 Aligned_cols=223 Identities=7% Similarity=-0.044 Sum_probs=147.2
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~ 169 (479)
.....+.+. ++...++...++.|.+||..+++ .+..+. .......+++++++ .++++. .++.|.+||..+.+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~-- 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE-- 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE--
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe--
Confidence 445667774 34455555667999999999987 344454 34568899998888 455555 78999999998873
Q ss_pred eeeeeeeccc-----cceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 170 ECAAVINAHI-----QDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 170 ~~~~~~~~~~-----~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
....+.... .....+++ .+++++++.. .++.|.++|..+++. ...+.. ......++++|+|++++++
T Consensus 117 -~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 117 -ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDKYNKMWTIT 189 (328)
T ss_dssp -EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECTTSEEEEEB
T ss_pred -EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcCCCCEEEEE
Confidence 333333222 13456777 3444444433 488999999987653 233322 2334678999999877776
Q ss_pred eCC----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 244 SDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 244 ~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
..+ +.|.++|.... +....+..........++|+|++++|.++.. .|.+||..
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred CCCccCCccccCCceEEEEECCCC---------------eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 654 78999997432 3444444322346889999999998887754 89999998
Q ss_pred CCCCCCCceeeEEEe-ccccccccceeEEEecCCCCCCCcc
Q psy14815 314 PEAGDSDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+++ +.. ............++++|++..|..+
T Consensus 253 t~~---------~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 253 ADR---------VPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp CSS---------CCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred CCc---------eeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 876 111 1111124568899999976666443
No 207
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=3.5e-12 Score=114.67 Aligned_cols=216 Identities=12% Similarity=-0.014 Sum_probs=153.0
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc-
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH- 178 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~- 178 (479)
.+++|++++.++.|.+||.++++ .+..+..+. ..+.++.++|+|++++ +.++.|..||. +++ .+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~---~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR---ELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE--EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC---EEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCe--EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC---EEEEEcCCC
Confidence 45789999999999999999997 456666655 4688999999999888 45778999998 553 33344433
Q ss_pred ccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeee--ecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 179 IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 179 ~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
...+.++.+.++|+++++.+. ++.|..+|.. ++..+..... ...+......+++.++|+++++...++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 346788999999999999887 7778888763 3322221110 01222344556789999999999999999999973
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccc---
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR--- 332 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~--- 332 (479)
+ +.+.++... ..+.++.+.+++.++++++.++.|..+|..+++ .+.+...
T Consensus 155 -G---------------~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~---------~~w~~~~~~~ 207 (276)
T 3no2_A 155 -G---------------QLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR---------IVRRVNANDI 207 (276)
T ss_dssp -S---------------CEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC---------EEEEEEGGGS
T ss_pred -C---------------CEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc---------EEEEecCCCC
Confidence 2 344555542 345677888999999999888899999999887 2322211
Q ss_pred -c-cccceeEEEecCCCCCCCc
Q psy14815 333 -A-HNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 333 -~-h~~~v~~~~~sp~~~~l~~ 352 (479)
+ ....+..++..++|..+..
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEE
T ss_pred CCccccccccceEcCCCCEEEE
Confidence 1 1233677888888876644
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.49 E-value=3.1e-12 Score=130.90 Aligned_cols=246 Identities=11% Similarity=0.100 Sum_probs=157.6
Q ss_pred ccccceEEEEECCCCCeEEEe-----eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSC-----GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||-+ +...+|++||+++++.+...
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~---------------------------------- 171 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP---------------------------------- 171 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc----------------------------------
Confidence 466789999999999998843 33357999999877643210
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCC-------------eEEEEECCCCeEEEeEEEe--C-CCCcEEEEEEcCCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDA-------------TTAVWDKRSGQFECNATLE--G-HENEVKSVTWSKNGQ 147 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg-------------~i~iwd~~~~~~~~~~~~~--~-~~~~v~~l~~~~~~~ 147 (479)
-+......++|+ |++.|+.++.+. .|++|++.+++......+. . +.....++.|+|||+
T Consensus 172 ----~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~ 246 (693)
T 3iuj_A 172 ----LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR 246 (693)
T ss_dssp ----EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC
T ss_pred ----cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC
Confidence 000112457899 999999988774 4999999876532223333 2 344578899999999
Q ss_pred EEEEEeC----CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cC---CcEEEEecCCcccceEeee
Q psy14815 148 FLATCSR----DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YD---DTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 148 ~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d---g~i~i~d~~~~~~~~~~~~ 219 (479)
+|+.... ...|.++|+.++. .....+..+....... +++++..|+..+ .+ +.|..+|+.++... ...
T Consensus 247 ~l~~~~~~~~~~~~i~~~d~~~~~--~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~--~~~ 321 (693)
T 3iuj_A 247 FLLISAANSTSGNRLYVKDLSQEN--APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA--HWR 321 (693)
T ss_dssp EEEEEEESSSSCCEEEEEETTSTT--CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCE
T ss_pred EEEEEEccCCCCcEEEEEECCCCC--CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--ccE
Confidence 8765443 2479999987753 1233344444444444 566665555444 33 57999999875431 112
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeC-CC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSD-DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
.+..|...+. .|++++++|+.... ++ .|++|++... ....+.......+..+.++++++
T Consensus 322 ~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~----------------~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 322 DLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK----------------RVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC----------------EEEEECCSSSSEEEECCCCTTCS
T ss_pred EEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC----------------eeEEeecCCCceEEeeecCCCCC
Confidence 3445555554 88899988876654 43 6888886421 12333322245677888888888
Q ss_pred eEEEEeCC----CeEEEcccCCCC
Q psy14815 297 LIATACGD----DAIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~~~d----g~i~vw~~~~~~ 316 (479)
.++....+ +.++.||+.+++
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEEecCCCCCCEEEEEECCCCe
Confidence 76665544 789999987664
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=1.5e-10 Score=108.65 Aligned_cols=244 Identities=10% Similarity=0.034 Sum_probs=156.1
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 16 NVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.++++|||++++.+. .++.|.+||..+.+.+..+.... . ..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~-----------------------~----~~-- 120 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD-----------------------A----PR-- 120 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC-----------------------c----cc--
Confidence 899999999988875 35778999987766554432100 0 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEE-EeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vw 161 (479)
..+......++|+|||++|+++.. ++.|.++| .+++. ... +.. .. ++.+.|++ +.+++.+.||.+.++
T Consensus 121 -~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~v 192 (373)
T 2mad_H 121 -FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred -cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEE
Confidence 001123457899999999998874 47899999 98863 344 332 11 24455544 456677789999999
Q ss_pred EeCCCCceeeeee--eeccccce-eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----------CCccE
Q psy14815 162 EVGEEDEYECAAV--INAHIQDV-KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----------HTSTV 228 (479)
Q Consensus 162 d~~~~~~~~~~~~--~~~~~~~v-~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------~~~~v 228 (479)
|. +++....... ......++ ....+.+++..++..+..+.+.+.|+...... ....+.. .....
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~--v~~~~~~~~~~~~~~~~~p~g~ 269 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT--NKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce--EeeeeeecCCcccccceecCce
Confidence 99 6543211110 00111121 23456676655555557889999998754321 1111110 12234
Q ss_pred EEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-e
Q psy14815 229 WSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-L 297 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~ 297 (479)
..+.++|+++.++.+.. .+.|.++|+. +.+.+.++.. ......++|+|||+ +
T Consensus 270 ~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~---------------t~~vv~~i~~--g~~p~~i~~s~Dg~~~ 332 (373)
T 2mad_H 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL---------------VGQTSSQISL--GHDVDAISVAQDGGPD 332 (373)
T ss_pred EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC---------------CCEEEEEEEC--CCCcCeEEECCCCCeE
Confidence 45788999988877653 3579999973 3355666654 34688999999999 7
Q ss_pred EEEEe-CCCeEEEcccCCCC
Q psy14815 298 IATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 298 l~~~~-~dg~i~vw~~~~~~ 316 (479)
++++. .++.|.+||..+++
T Consensus 333 l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 333 LYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEEEcCCCCeEEEEECCCCC
Confidence 77777 58999999999987
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=7.8e-11 Score=107.39 Aligned_cols=235 Identities=11% Similarity=0.078 Sum_probs=151.9
Q ss_pred cCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
...-..+..|++++ .++++...++.|..||..+++. ..+. ....+.++++++++++++ +. ++.|.+||..+++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV---QRVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQS 84 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE---EEEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCc
Confidence 34456688999965 4556666688999999998763 2222 346799999999999544 44 5679999987653
Q ss_pred ceeeeeeeec--cccceeEEEEecCCCEEEEEEcC---------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 168 EYECAAVINA--HIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 168 ~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
. ..+..... ....++.++++|+|+++++.... ..-.+|.+..... ...+.........++|+|+
T Consensus 85 ~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 85 A-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp E-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEEESBEEEEEECTT
T ss_pred E-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeeccccccceEEcCC
Confidence 2 22221111 12347889999999976654332 2335555443221 1112223345678999999
Q ss_pred CCEEE-EeeCCCeEEEEeccC-CCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 237 GSRLA-TCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 237 ~~~l~-s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++.|+ +.+.++.|.+|++.. .... ...+....+... ......++++++|.+.++...++.|..||..+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~---------~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQI---------SNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCE---------EEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcc---------cCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 98775 455678899999742 1110 111222333332 35678999999998888887888999999987
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEec-CCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~~~~ 354 (479)
++ ++..+ ..+...+++++|. |+++.|..+.
T Consensus 230 G~---------~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 230 GK---------RLQTV-KLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CC---------EEEEE-ECSSSBEEEEEEESGGGCEEEEEE
T ss_pred ce---------EEEEE-ECCCCCceEEEEeCCCCCEEEEEc
Confidence 76 33333 3445679999998 8988875443
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=6.1e-11 Score=110.01 Aligned_cols=292 Identities=12% Similarity=0.076 Sum_probs=182.7
Q ss_pred EEECCCCCeEEEeeC-----CCcEEEEecccccccccccC--------CCccceEEEee----------cCCcEEEecCC
Q psy14815 17 VSWNPQGTMISSCGE-----DKNIRLWVMVIREPYEKLHG--------LPVETSLRQLV----------EDKNIRLWGKE 73 (479)
Q Consensus 17 l~~s~~~~~l~t~~~-----dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~----------~~~~i~~w~~~ 73 (479)
....|+++.++.... ++.|.+.|..+++.+..+.. .+++..++... .++.+.+||..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 445789998887764 67999999998887766543 35555555544 35679999988
Q ss_pred CCCCceeeeEEeccc----cCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 74 SFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~----~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
+... ........+ .......++++|||++++++.. ++.|.++|+.+++ .+..+.... . ...+....+
T Consensus 118 t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~--vv~tI~v~g--~-~~~~P~g~~ 190 (386)
T 3sjl_D 118 TLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA--FKRMLDVPD--C-YHIFPTAPD 190 (386)
T ss_dssp TCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE--EEEEEECCS--E-EEEEEEETT
T ss_pred CCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc--EEEEEECCC--c-ceeecCCCc
Confidence 5321 111111110 1224557899999999988874 6899999999997 344443211 1 223333456
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeee--eeecccccee-EEEEe-cCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVK-KVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATLK- 222 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~-~l~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 222 (479)
.+++.+.||.+.+.++.......... .+.....++. ...|. ++|++++ .+.+|.|.+.|..+.... ....+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~--v~~~~~~ 267 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK--FLPAVEA 267 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE--ECCCEES
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce--eecceec
Confidence 77788889999999987632211111 1111111221 24564 5675544 566899999999765421 111111
Q ss_pred ---------CCCccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 223 ---------SHTSTVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 223 ---------~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
........++++++++.++.... .+.|.+.|+.+ .+.+.++.. +
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t---------------~kv~~~i~v--g 330 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT---------------GERLAKFEM--G 330 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT---------------CCEEEEEEE--E
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC---------------CeEEEEEEC--C
Confidence 01122334777999998887643 24688888743 355666654 3
Q ss_pred ccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 284 RTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 284 ~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
..+++|++++|++ +|++++ .++.|.++|..+++ .+.++. -.+..+.+.+++|
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k---------~~~~i~--~~~~p~~l~~s~d 384 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE---------ELRSVN--QLGHGPQVITTAD 384 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC---------EEEEEC--CCCSSCCEEEECC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc---------EEEEec--CCCCCceeEECCc
Confidence 4788999999997 666654 48999999999988 444442 2345567788877
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=2.2e-12 Score=120.24 Aligned_cols=184 Identities=11% Similarity=0.021 Sum_probs=133.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.++.+++++...++++|+.++ +++|++...+....- .. .. ..... ...+..
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~--~~----------------------~~-~~~~~--~~~lp~- 89 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS--DS----------------------TP-LTFKW--EKEIPD- 89 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS--SS----------------------CC-CCCSE--EEECTT-
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc--cc----------------------cc-ccceE--EeeCCC-
Confidence 689999999999999999885 667987654321110 00 00 00000 123455
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
|+.++| ++.+|+++ .++.|++||+.+.. .......+...+.++.+.+. .+++++.||.+.+||+.+... .
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~---~ 159 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST---K 159 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE---E
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc---c
Confidence 999999 89999999 78999999998765 33345567778888888764 389999999999999997642 1
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee------c---CCCccEEEEEEccCCCEEEEe
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL------K---SHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~s~ 243 (479)
. +...|+|++|+|+| ++.|..||.+++|+....... ....+ . +|...|.++.|.+++.++++-
T Consensus 160 ~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~--~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME--KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp E----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE--EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred c----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc--ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 1 45679999999999 788999999999988755421 01222 2 478899999999999888763
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=1.3e-11 Score=113.46 Aligned_cols=233 Identities=11% Similarity=0.097 Sum_probs=151.0
Q ss_pred CCcEEEEEECCCCCEEEE-------EECCCeEEEEECCCCeEEEeEE--EeCCCCcEEEEEEcCC-CCEEEEEeCCCcEE
Q psy14815 90 QRTIRETAWSPCGNFIAS-------ASFDATTAVWDKRSGQFECNAT--LEGHENEVKSVTWSKN-GQFLATCSRDKSVW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t-------~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~ 159 (479)
-....+++|++++.++++ +..++.|.+||..+++...... ..++...+.++.++++ ++ ++.++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEE
Confidence 346688999999988887 5778999999988886432211 0124467899999998 65 44444455788
Q ss_pred EEEeCCCCceeee-eee-e-ccccceeEEEEecCCCEEEEEEcC---------------CcEEEEecCCcccceEeeeee
Q psy14815 160 VWEVGEEDEYECA-AVI-N-AHIQDVKKVRFHPFDNILASASYD---------------DTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 160 vwd~~~~~~~~~~-~~~-~-~~~~~v~~l~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~ 221 (479)
+||.. ++. ... ... . .....+.+++++++++++++...+ +.|..||.. ++. ..+
T Consensus 96 ~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~ 167 (314)
T 1pjx_A 96 VVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-----IQV 167 (314)
T ss_dssp EEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-----EEE
T ss_pred EEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-----EEe
Confidence 99987 432 211 111 1 112357899999999888776655 567777765 321 111
Q ss_pred cCCCccEEEEEEc----cCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEEEecCCC
Q psy14815 222 KSHTSTVWSLAFD----RIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLT 295 (479)
Q Consensus 222 ~~~~~~v~~~~~~----~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~ 295 (479)
..+......++|+ ++++.++.+ ..++.|.+||....... ........+..+ . ..+..++++++|
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---------~~~~~~~~~~~~-~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGT-HEGGADGMDFDEDN 237 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCC-SSCEEEEEEEBTTC
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---------ccceEEEECCCC-CCCCCCceEECCCC
Confidence 2233456789999 999766554 56789999997521110 001122233332 2 567889999999
Q ss_pred CeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 296 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 296 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.++++...++.|.+|+.++++ .......+...+.+++|+|+++.|.
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~----------~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQ----------PKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBS----------CSEEEECSSSCEEEEEECTTSSEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCc----------EeEEEeCCCCCceeEEECCCCCEEE
Confidence 988888788999999988554 1111123446789999999998553
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=2.2e-12 Score=120.25 Aligned_cols=175 Identities=11% Similarity=0.054 Sum_probs=130.6
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCe---------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
+++.+++++...++++|+.+ .+.+|++...+ ........ +.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999987 56669865332 22222333 556 999999 89999999 889999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+++... ......+..++.++.+.+. .+++++.||.|.+||+..+.. . . +...|++++|+|+| ++.
T Consensus 113 v~sl~~---~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~----~-~---~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 113 LEELSE---FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST----K-Q---LAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSSTTC---EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE----E-E---EEESEEEEEECSSE--EEE
T ss_pred chhhhc---cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc----c-c---ccCCceEEEEcCCc--eEE
Confidence 988743 2234556677888877654 388899999999999986553 1 1 45689999999999 678
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE------e---ccccccEEEEEecCCCCeEEEE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL------S---GHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
|..||++++|+...... ....++ . +| ...|.++.|.+++.++++=
T Consensus 178 g~~dg~i~~~~~~~~~~-------------~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEM-------------EKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EETTSCEEEEEEETTEE-------------EEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEE
T ss_pred EEcCCcEEEEcCCCccc-------------cccceecCCcccccccCC-CeeEEEEEEecCCeEEEEE
Confidence 99999999998743321 002333 2 23 6789999999999988763
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.45 E-value=5.5e-11 Score=113.30 Aligned_cols=242 Identities=14% Similarity=0.105 Sum_probs=158.9
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....|+|+++++++++...++.|++||..++...... .. ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-------------------------------------~~-~~ 172 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-------------------------------------PG-FK 172 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-------------------------------------ET-CC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-------------------------------------cc-CC
Confidence 46788999999987777777789999987654432111 11 12
Q ss_pred cEEEEEECCCCCEEEEEECCC--eEEEEECCCCeEE-EeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 92 TIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~-~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
... ++|+++++.|+++..++ .|.+++..++... ....+.. ....+.+++++|++..|+++..++.|+.||..+..
T Consensus 173 ~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 173 GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 223 89999999999988866 7999988765421 1111112 44567899999955566667778899999998763
Q ss_pred ceeeeee--eeccccc--eeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec------------CCCccEEE
Q psy14815 168 EYECAAV--INAHIQD--VKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK------------SHTSTVWS 230 (479)
Q Consensus 168 ~~~~~~~--~~~~~~~--v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------~~~~~v~~ 230 (479)
. ..... ..+.... ...++|+|+ +.++++-..++.|+.|+...... .+.... ..-.....
T Consensus 252 ~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~---~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 252 V-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECE---WFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp E-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE---EEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred E-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEE---EEEeCCCCCCcCCCcccccEeCCCeE
Confidence 2 11110 1111111 238999995 66666666788999998764311 111100 01234789
Q ss_pred EEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--------------ccccEEEEEecCCC
Q psy14815 231 LAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLT 295 (479)
Q Consensus 231 ~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~l~~~~~~ 295 (479)
++++++|+++++-+ .++.|+.|++..+. +.++.++ .-.....+++++++
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~G~----------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILDGY----------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTTTE----------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCCCE----------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 99999999777777 78899999963321 1222221 02357899999998
Q ss_pred CeEEEEeCCCeEEEccc
Q psy14815 296 DLIATACGDDAIRIFKE 312 (479)
Q Consensus 296 ~~l~~~~~dg~i~vw~~ 312 (479)
.++++-..++.|+.+++
T Consensus 392 ~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 392 GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEESTTCEEEEEEE
T ss_pred CEEEEECCCCeEEEEEe
Confidence 88888888888888765
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=5.6e-11 Score=108.81 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=149.7
Q ss_pred ccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+..+........|+|+++ ++++...++.|..|+. +++. ..+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~---------------------------------- 81 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL---------------------------------- 81 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE----------------------------------
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE----------------------------------
Confidence 44555566778899999998 5666667888999975 2221 111
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-EeCC-CCcEEEEEEcCCCCEEEE----EeC---
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGH-ENEVKSVTWSKNGQFLAT----CSR--- 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~-~~~v~~l~~~~~~~~l~~----~~~--- 154 (479)
..+...+..++++++|+++++...++.|.+|+.. ++...... ..+. ...+..+.+.++|++.++ |..
T Consensus 82 ---~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 82 ---LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp ---EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred ---eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 1234568899999999877666566899999986 54332221 1111 134678999999998776 332
Q ss_pred ----------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC------CcEEEEecCCcccceEee
Q psy14815 155 ----------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 155 ----------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~ 218 (479)
.+.|..||..+++. .. +. .......++|+|+++.|+.+... +.|.+|++..........
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~-~~---~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPL-QR---MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCC-EE---EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred cccccccccCCCeEEEEcCCCCcE-EE---Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 24566666655432 11 11 33456789999999988777665 689999987533110011
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
...........++++++|+. .+++.+ .|.+|+.. .+.+..+... . .+.+++|+++++.|
T Consensus 233 -~~~~~~~~pdgi~~d~~G~l-wv~~~~-gv~~~~~~----------------g~~~~~~~~~-~-~~~~~~f~~d~~~L 291 (305)
T 3dr2_A 233 -FASVPDGLPDGFCVDRGGWL-WSSSGT-GVCVFDSD----------------GQLLGHIPTP-G-TASNCTFDQAQQRL 291 (305)
T ss_dssp -EECCSSSCCCSEEECTTSCE-EECCSS-EEEEECTT----------------SCEEEEEECS-S-CCCEEEECTTSCEE
T ss_pred -EEECCCCCCCeEEECCCCCE-EEecCC-cEEEECCC----------------CCEEEEEECC-C-ceeEEEEeCCCCEE
Confidence 11112334567899999984 445444 48999852 1334455543 2 58899999998888
Q ss_pred EEEeCCCe
Q psy14815 299 ATACGDDA 306 (479)
Q Consensus 299 ~~~~~dg~ 306 (479)
..++.++.
T Consensus 292 ~it~~~~l 299 (305)
T 3dr2_A 292 FITGGPCL 299 (305)
T ss_dssp EEEETTEE
T ss_pred EEEcCCeE
Confidence 87776543
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=5.4e-10 Score=103.23 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=121.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCC----CcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRD----KSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d----g~i~vwd~ 163 (479)
...+.+++|+++++++++. . ..|.+||..+++...+..... ....+.++.++|+|+++++...+ +...+|.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 3578999999999877654 4 459999998887433322111 12358899999999866654322 22344444
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecC--Cc-ccc-eEeeeeecCCCccEEEEEEccCCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKED--KA-EAD-WINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.++ ... .+.........++|+|+++.++.+ +.++.|.+||+. ++ ... ...+..+.........++++++|.
T Consensus 167 ~~g-~~~---~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 167 AKG-KVT---KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp ETT-EEE---EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred eCC-cEE---EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 332 211 222233456789999999876555 456889999986 44 211 112223333445678899999998
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEEeC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 303 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~~~ 303 (479)
+.++...++.|.+||. .. +.+..+... ...+++++|+ ++++.|++++.
T Consensus 243 lwva~~~~~~v~~~d~-~g---------------~~~~~i~~~-~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DG---------------NHIARYEVP-GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEETTTEEEEECT-TC---------------CEEEEEECS-CSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEEeCCCEEEEECC-CC---------------CEEEEEECC-CCCcEEEEEecCCCCEEEEEec
Confidence 7777766788999986 21 223444443 4579999998 88776655544
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=6.9e-10 Score=100.96 Aligned_cols=196 Identities=6% Similarity=-0.078 Sum_probs=132.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
...+.++++.+++.+.++...++.|..+|.. ++.. ...+......+.++++.++++..++...++.|..+|. +++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~- 178 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL- 178 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE-
Confidence 4678899999999888877768899999987 5532 2233334567899999999996666656788999998 3321
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.. .........+..+++++++++.++....+.|.+||.. +.. . ......+...+.+++++++|+..++...++.|
T Consensus 179 ~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 253 (300)
T 2qc5_A 179 EE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEI--S-EYDIPTPNARPHAITAGKNSEIWFTEWGANQI 253 (300)
T ss_dssp EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCE--E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred EE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcE--E-EEECCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence 11 1122334567899999999877766667789999983 331 1 12233445678899999999876666667899
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..||.. . .. . ...+... ...+.++++.++|.++++.. . .|..++.
T Consensus 254 ~~~~~~-g-~~------------~-~~~~~~~-~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 254 GRITND-N-TI------------Q-EYQLQTE-NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEECTT-S-CE------------E-EEECCST-TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EEECCC-C-cE------------E-EEECCcc-CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 999862 1 10 1 1112211 34678899999998766655 4 6666654
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=1e-09 Score=103.09 Aligned_cols=224 Identities=9% Similarity=-0.054 Sum_probs=139.9
Q ss_pred EEEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--C
Q psy14815 95 ETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-------ENEVKSVTWSKNGQFLATCSR--D 155 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~~--d 155 (479)
.++++||+++++++. .++.|.+||..+.+. +..+... ......+.|+|||++|++++. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 899999999999886 367899999988763 3333211 123458999999999999875 4
Q ss_pred CcEEEEEeCCCCceeeeee-eeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeee-eecCCCcc-EEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFA-TLKSHTST-VWSL 231 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~-v~~~ 231 (479)
+.|.++| .+++. ... +.. . .++.+.|++ +.+++.+.||.+.++|. +++....... .......+ ....
T Consensus 148 ~~v~viD-~t~~~---~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~ 218 (373)
T 2mad_H 148 PAVGLVV-QGGSS---DDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred CeEEEEE-CCCCE---EeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecc
Confidence 7899999 87742 333 221 1 124455654 55677778999999999 6553211000 00011112 2234
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---------ccccccEEEEEecCCCCeEEEEe
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---------GHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.+.+++..++..+..+.+.+.|+...... .+..+. +........+.++|+++.+.++.
T Consensus 219 ~~~~~~~~~~~~~~~~~v~vid~~~~~~~-------------v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 219 AQANKSGRIVWPVYSGKILQADISAAGAT-------------NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred eeEecCCEEEEEcCCceEEEEeccCCcce-------------EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 56666665555557788999998533211 011111 00122344578999988877765
Q ss_pred C----------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC-CCCcc
Q psy14815 303 G----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKT 353 (479)
Q Consensus 303 ~----------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~ 353 (479)
. ++.|.++|..+.+ .+.++..+ ....+++|+|||+ .+...
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~---------vv~~i~~g--~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQ---------TSSQISLG--HDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCE---------EEEEEECC--CCcCeEEECCCCCeEEEEE
Confidence 3 3579999999887 44444322 3588999999999 55443
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=1.5e-10 Score=110.27 Aligned_cols=203 Identities=9% Similarity=-0.023 Sum_probs=136.3
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~ 168 (479)
.....++|+++++++++...++.|++||..+++... .... ..... ++|+++++.|+++..++ .|.+++......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--VHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--EEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--eecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 468899999999877777778999999999886332 2232 23334 99999999999988866 788888776532
Q ss_pred eeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee--ecCCCccE--EEEEEccC-CCEEEE
Q psy14815 169 YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT--LKSHTSTV--WSLAFDRI-GSRLAT 242 (479)
Q Consensus 169 ~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~v--~~~~~~~~-~~~l~s 242 (479)
......... ....+.+++++|++..|+.+..++.|+.||..++.. ..+.. ..++...- ..++|+|+ +.++++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV--TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE--EEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE--EEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 222211112 345678899999555555577788999999986542 11111 11222211 38999995 555555
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--------------ccccEEEEEecCCCCeEEEEe-CCCeE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLTDLIATAC-GDDAI 307 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~l~~~~~~~~l~~~~-~dg~i 307 (479)
-..++.|+.|+.... ...+.++ .-.....++++++|.++++-+ .++.|
T Consensus 285 d~~~~~I~~~~~~g~-----------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-----------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp ETTTTEEEEECTTCC-----------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred eCCCCEEEEEecCCC-----------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 567788999986321 1111111 023478999999999888877 88999
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
+.|++..+.
T Consensus 348 ~~~~~~~G~ 356 (409)
T 3hrp_A 348 RKLDILDGY 356 (409)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCE
Confidence 999976664
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.38 E-value=9.3e-11 Score=110.79 Aligned_cols=240 Identities=12% Similarity=0.031 Sum_probs=145.0
Q ss_pred CCCCeEEEeeC-C----CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 21 PQGTMISSCGE-D----KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 21 ~~~~~l~t~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
++++.++.... + ++|.++|..+++.+..+. .+ ..+ .
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~------------------------------------vG-~~P--g 122 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTD------------------------------------GG-FLP--H 122 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE------------------------------------EC-SSC--E
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEE------------------------------------CC-CCC--c
Confidence 46666655543 2 688888888777665541 11 234 7
Q ss_pred EEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-----CCcEEEEEEcCCCCEEEEEeC--CCcE
Q psy14815 96 TAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-----ENEVKSVTWSKNGQFLATCSR--DKSV 158 (479)
Q Consensus 96 v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~~~~~--dg~i 158 (479)
++++||+++++++. .++.|.++|..+++......+.+. ......+.|+|||++++++.. ++.|
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~V 202 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAV 202 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeE
Confidence 99999999888876 367899999999874333333201 123567899999999999874 5789
Q ss_pred EEEEeCCCCceeeeeeeec-c---ccceeEEEEecCCCE-------------------------------------EEEE
Q psy14815 159 WVWEVGEEDEYECAAVINA-H---IQDVKKVRFHPFDNI-------------------------------------LASA 197 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~-~---~~~v~~l~~~~~~~~-------------------------------------l~~~ 197 (479)
.+.|+.+.+....+..-.. + .+.-..+.++++|++ ++..
T Consensus 203 sVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 203 GVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp EEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred EEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE
Confidence 9999998743322221000 0 000111333333333 3333
Q ss_pred EcCCcEEEEecCCcccceEeeeeec-----C---CCccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCC
Q psy14815 198 SYDDTVKLFKEDKAEADWINFATLK-----S---HTSTVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGN 259 (479)
Q Consensus 198 ~~dg~i~i~d~~~~~~~~~~~~~~~-----~---~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~ 259 (479)
+..+.|.+.|.............+. . .......++++|+++.+++... ++.|.+.|+..
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T--- 359 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET--- 359 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT---
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC---
Confidence 3344455555433221000000000 0 0011122688999888776542 35799999843
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCC
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~ 316 (479)
.+.+.++.. +.....++|+|+++ +++++. .++.|.++|..+.+
T Consensus 360 ------------~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 360 ------------GERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp ------------CCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ------------CeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 355566654 33688999999999 888888 58999999999998
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.3e-10 Score=108.19 Aligned_cols=255 Identities=8% Similarity=-0.054 Sum_probs=155.6
Q ss_pred cceEEEEECCCCCeEEEee--CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 12 GRVWNVSWNPQGTMISSCG--EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
..+..++++|+|+++++.. .++.++||.+.+++ +..+... . .....+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~------------------~------------~~~~~~ 65 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQ------------------S------------GNAIIT 65 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCC------------------C------------SSCCCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCc------------------c------------cCcccc
Confidence 6899999999999998864 23446777664322 1111000 0 001245
Q ss_pred CCcEEEEEECCCCCEEEEEEC-----CCeEEEEECCCCeEEEeEEEeC----CCCcEEEEEEcCCCCEEE-EEe---CCC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-----DATTAVWDKRSGQFECNATLEG----HENEVKSVTWSKNGQFLA-TCS---RDK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-----dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~-~~~---~dg 156 (479)
...+..++++++++++++-.. ++.|.+||+.+++......+.. +...+..+++++++..++ +.. .++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 678999999999876665443 5799999999987433333321 223568999998655554 444 578
Q ss_pred cEEEEEeCCCCceeeeee------------eec--------------cccceeEEEEecCCCEEEEEEcCC-cEEEEecC
Q psy14815 157 SVWVWEVGEEDEYECAAV------------INA--------------HIQDVKKVRFHPFDNILASASYDD-TVKLFKED 209 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~------------~~~--------------~~~~v~~l~~~~~~~~l~~~~~dg-~i~i~d~~ 209 (479)
.|.+||+.+++....... ..+ -...+..++|+|+++.|+.+...+ .+..++..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 899999986643221100 000 012357899999999888887766 44444432
Q ss_pred C---ccc-ceEeee--eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 210 K---AEA-DWINFA--TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 210 ~---~~~-~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
. +.. ...... ...++......++++++|..+++...++.|.+||...+ +..........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G---------------~~~~~~~~~~~ 290 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR---------------AYKLLVTDEKL 290 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT---------------EEEEEEECGGG
T ss_pred HhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC---------------CEEEEEECCce
Confidence 1 000 000000 11122334567899999998888888999999996221 11112222124
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..+.+++|.+++.++++.+..+.+.+|.-
T Consensus 291 ~~p~~va~~~~g~l~v~~~~~~~~~~f~~ 319 (343)
T 2qe8_A 291 SWTDSFNFGSDGYLYFDCNQLHHSAPLNA 319 (343)
T ss_dssp SCEEEEEECTTSCEEEEECCGGGSGGGBT
T ss_pred ecCCeeEECCCCcEEEEeCcccccccccc
Confidence 56899999999988888776666655553
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=7.7e-10 Score=102.21 Aligned_cols=227 Identities=10% Similarity=0.046 Sum_probs=144.3
Q ss_pred cEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
-..+..|+|++ .++++...++.|..||..+++.. .+. ....+.++.|+++++++++. .+ .|.+||..+++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~-~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT---VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL-T 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE-E
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE-E
Confidence 45678899975 45566667889999999988632 222 24579999999998866654 44 499999877642 2
Q ss_pred eeeeeec--cccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 171 CAAVINA--HIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 171 ~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+..... ....++.++++|+|+++++... .+.|..++ .++. ..+..+......++|+|+++.++.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-----~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-----TKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-----EEEEEEESSEEEEEECTTSCEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-----EEeeCCCcccCCeEEcCCCCEEEE
Confidence 2211111 1235889999999987665543 24455555 2221 112222345678999999987755
Q ss_pred e-eCCCeEEEEeccC-CC-CCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 243 C-SDDATVKIWKEYK-PG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
+ +.++.|.+||+.. .. .. ...+....+... ...+..++++++|.++++...++.|..|+.. ++
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~---------~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~--- 261 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPT---------GKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN--- 261 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBS---------SCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC---
T ss_pred EECCCCEEEEEEcccccCCcc---------cCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC---
Confidence 4 4568899999751 11 11 001222233222 3456789999999888877777899999984 43
Q ss_pred CceeeEEEeccccccccceeEEEec-CCCCCCCcc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWN-PVVPEPQKT 353 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~~~ 353 (479)
.+..+ ..+...+++++|+ |++..|...
T Consensus 262 ------~~~~i-~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 262 ------HIARY-EVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ------EEEEE-ECSCSBEEEEEEESTTSCEEEEE
T ss_pred ------EEEEE-ECCCCCcEEEEEecCCCCEEEEE
Confidence 12222 2345578999998 898877433
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.31 E-value=1.1e-10 Score=119.36 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=147.3
Q ss_pred ccCCcEEEEEECCCCCEEEEEE-----CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASAS-----FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
++...+..++|||||++|+.+. ....|++||+.+++.... .+... ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 4556788999999999988543 235799999999974322 22211 12567899 9999998887743
Q ss_pred --------EEEEEeCCCCce-eeeeeeec-cccceeEEEEecCCCEEEEEEc----CCcEEEEecCCcccceEeeeeecC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINA-HIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++|++.+.... ..+..... +.....++.|+|+|++|+.... +..|.++|+.++... ...+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~---~~~l~~ 278 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP---LLTVQG 278 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---CEEEEC
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---eEEEeC
Confidence 999998775321 22222333 4445778999999998866543 248999999876432 233444
Q ss_pred CCccEEEEEEccCCCEEEEee-CC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 224 HTSTVWSLAFDRIGSRLATCS-DD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~-~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+....... ++++++.|+..+ .+ +.|..+|+..+.. ..++ .+..+... +. .|++++++|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~----------~~~~---~l~~~~~~-~~--~~s~~g~~lv 341 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP----------AHWR---DLIPERQQ-VL--TVHSGSGYLF 341 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGCE---EEECCCSS-CE--EEEEETTEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------cccE---EEecCCCC-EE--EEEEECCEEE
Confidence 55555444 666676665444 33 5788888755422 1222 33343233 33 8889998877
Q ss_pred EEeCCC---eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 300 TACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 300 ~~~~dg---~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
....++ .|++|++..+. ...+.....+.+..+.++|+++.+.
T Consensus 342 ~~~~~~g~~~l~~~d~~g~~----------~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGKR----------VREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp EEEEETTEEEEEEECTTSCE----------EEEECCSSSSEEEECCCCTTCSCEE
T ss_pred EEEEECCeeEEEEEECCCCe----------eEEeecCCCceEEeeecCCCCCEEE
Confidence 665543 68899887543 3333223445677888888888773
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=8e-10 Score=101.10 Aligned_cols=225 Identities=7% Similarity=0.014 Sum_probs=143.2
Q ss_pred cCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
.........|+|+++ ++++...++.|..|+. +++. ..+..+...+..+.++++|+++++...++.|.+|+.. ++
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 345667899999998 5666677899999998 4542 2333455678999999999966655556789999875 32
Q ss_pred ceeeee-eeecc-ccceeEEEEecCCCEEEE----EEc-------------CCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 168 EYECAA-VINAH-IQDVKKVRFHPFDNILAS----ASY-------------DDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 168 ~~~~~~-~~~~~-~~~v~~l~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
...+. ..... ...++.++++|+|++.++ |.. .+.|..||..+++.. .+ . .....
T Consensus 118 -~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--~~---~-~~~~p 190 (305)
T 3dr2_A 118 -AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--RM---A-DLDHP 190 (305)
T ss_dssp -EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE--EE---E-EESSE
T ss_pred -EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE--EE---e-cCCCC
Confidence 12211 11111 134678999999998886 332 245777777555431 11 1 33456
Q ss_pred EEEEEccCCCEEEEeeCC------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 229 WSLAFDRIGSRLATCSDD------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
..++|+|+++.|+.+... +.|.+|++.... . .....+..........++++++|.+.++.
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l------------~~~~~~~~~~~~~pdgi~~d~~G~lwv~~- 256 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-L------------HDRRHFASVPDGLPDGFCVDRGGWLWSSS- 256 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-E------------EEEEEEECCSSSCCCSEEECTTSCEEECC-
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-c------------cCCeEEEECCCCCCCeEEECCCCCEEEec-
Confidence 789999999988777665 689999975331 0 11111111113345678899999855544
Q ss_pred CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 303 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.+ .|.+|+.+... +..+. .+. .+.+++|+|+++.|..
T Consensus 257 ~~-gv~~~~~~g~~----------~~~~~-~~~-~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 257 GT-GVCVFDSDGQL----------LGHIP-TPG-TASNCTFDQAQQRLFI 293 (305)
T ss_dssp SS-EEEEECTTSCE----------EEEEE-CSS-CCCEEEECTTSCEEEE
T ss_pred CC-cEEEECCCCCE----------EEEEE-CCC-ceeEEEEeCCCCEEEE
Confidence 44 59999985332 33222 222 5889999999887643
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.21 E-value=4.5e-09 Score=97.51 Aligned_cols=262 Identities=9% Similarity=0.026 Sum_probs=156.7
Q ss_pred CccceEEEeec-----CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE----------CCCeEEEE
Q psy14815 53 PVETSLRQLVE-----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVW 117 (479)
Q Consensus 53 ~~~~~~~~~~~-----~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~----------~dg~i~iw 117 (479)
|+...++.... ++.+.+.|..+.. ... ....+ ..+ . ++++|||++++++. .++.|.+|
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~--~I~vG-~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIG--MIDGG-FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTE--EEE--EEEEC-SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCe--EEE--EEECC-CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 45555555543 5789999887422 111 11112 223 4 99999999888775 35789999
Q ss_pred ECCCCeEEEeEEEeC--C---CCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC
Q psy14815 118 DKRSGQFECNATLEG--H---ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 190 (479)
Q Consensus 118 d~~~~~~~~~~~~~~--~---~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 190 (479)
|..+++......+.. + ......+.|+|||++++++.. ++.|.++|+.+.+ .+..+.... . ...+...
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~---vv~tI~v~g--~-~~~~P~g 188 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA---FKRMLDVPD--C-YHIFPTA 188 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE---EEEEEECCS--E-EEEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc---EEEEEECCC--c-ceeecCC
Confidence 999987433322321 0 124567999999999998874 6899999999984 344432211 1 2233334
Q ss_pred CCEEEEEEcCCcEEEEecCC-cccceEeeeeecCCCccEE-EEEEc-cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC
Q psy14815 191 DNILASASYDDTVKLFKEDK-AEADWINFATLKSHTSTVW-SLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 267 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 267 (479)
.+.+++.+.||.+.+.++.. ++........+..-..++. ...|. ++|++++ .+.+|.|.+.|+......
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~------- 260 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK------- 260 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE-------
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce-------
Confidence 56777888889888888875 3321000000111112221 23554 6675555 555899999998543211
Q ss_pred CCCceEEEEEEe---------ccccccEEEEEecCCCCeEEEEeC----------CCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 268 NDSVWKCVCTLS---------GHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 268 ~~~~~~~~~~~~---------~~~~~~i~~l~~~~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
....+. +-.......++++++++.+..... .+.|.++|+.+++ .+.
T Consensus 261 ------v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---------v~~ 325 (386)
T 3sjl_D 261 ------FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---------RLA 325 (386)
T ss_dssp ------ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEE
T ss_pred ------eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------EEE
Confidence 111111 000112334677899888777643 2579999999988 555
Q ss_pred ccccccccceeEEEecCCCC-CCCc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVP-EPQK 352 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~-~l~~ 352 (479)
++.-+ ..+++++++||++ +|..
T Consensus 326 ~i~vg--~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 326 KFEMG--HEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp EEEEE--EEECEEEECSSSSCEEEE
T ss_pred EEECC--CCcceEEECCCCCeEEEE
Confidence 55433 3788999999997 4543
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.18 E-value=7.1e-10 Score=103.03 Aligned_cols=238 Identities=8% Similarity=-0.019 Sum_probs=145.8
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 16 NVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.++||+++++++. .+++|.+||..+++.+.++..... ..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~---------------------------~~-- 119 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA---------------------------PR-- 119 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS---------------------------CS--
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc---------------------------cc--
Confidence 799999999988886 368899999998887766521000 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC--CCeEEE--EECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF--DATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWV 160 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~v 160 (479)
.........++++|||++++++.. +..+.+ +|..+ ...+..- +. ....|++ ..+++.+.||.+.+
T Consensus 120 -~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 120 -FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp -CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECS-SC---CCCEEEETTEEECCCCTTSCEE
T ss_pred -cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEE
Confidence 000123456889999999999875 467888 88876 1222211 11 1123433 34556677888888
Q ss_pred EEeCC----CCceeee--eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------C---
Q psy14815 161 WEVGE----EDEYECA--AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-------H--- 224 (479)
Q Consensus 161 wd~~~----~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------~--- 224 (479)
.|+.. ....... ..+.....+. . .+++..++..+. +.|.+.|....... .+..+.. +
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~--v~~~~~~~~~~~~~~~~~ 262 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGAT--MKAAIDGNESGRKADNFR 262 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCE--EECCCCSSCTHHHHTTEE
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcce--EEEEEEeccccccccccc
Confidence 88876 2111100 0111122333 3 666666666666 99999998653321 1111110 0
Q ss_pred CccEEEEEEccCCCEEEEeeC---------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSD---------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
......++++|+++.++.+.. ++.+.++|+... +.+.++.. +.....++|+||+
T Consensus 263 p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---------------~vv~~i~v--g~~p~gi~~s~Dg 325 (368)
T 1mda_H 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------------QTSGPISN--GHDSDAIIAAQDG 325 (368)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------------CEEECCEE--EEEECEEEECCSS
T ss_pred cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---------------eEEEEEEC--CCCcceEEECCCC
Confidence 111112689999998886543 235669998544 44555544 2368899999999
Q ss_pred Ce-EEEEe-CCCeEEEcccCCCC
Q psy14815 296 DL-IATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 296 ~~-l~~~~-~dg~i~vw~~~~~~ 316 (479)
++ +++.. .++.|.++|+.+.+
T Consensus 326 ~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 326 ASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp SCEEEEEETTTTEEEEEESSSCE
T ss_pred CEEEEEccCCCCeEEEEECCCCc
Confidence 84 55555 58999999999987
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.17 E-value=1.2e-08 Score=95.43 Aligned_cols=191 Identities=9% Similarity=0.020 Sum_probs=125.7
Q ss_pred cEEEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeC--CC-CcEEEEEEcCCCCEEEEEe---------
Q psy14815 92 TIRETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATLEG--HE-NEVKSVTWSKNGQFLATCS--------- 153 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~--~~-~~v~~l~~~~~~~~l~~~~--------- 153 (479)
....+..+|+| .++++..+ |.|.+.|.++.+ .+..... .. ..-+.+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe--EEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 44567788999 77766555 789999999887 3444432 21 2244688899999888885
Q ss_pred ----------CCCcEEEEEeCCCCceeeeeeeec--cccceeEEEE--ecCCCEEEEEEc------CCcEEEEecCCccc
Q psy14815 154 ----------RDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRF--HPFDNILASASY------DDTVKLFKEDKAEA 213 (479)
Q Consensus 154 ----------~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~l~~--~~~~~~l~~~~~------dg~i~i~d~~~~~~ 213 (479)
.+.+|.+||+.+. +....+.. .......+.| +|+++++.++++ +++|.+|..+.+.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~---k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~- 291 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKR---KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK- 291 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTT---EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-
T ss_pred ccchhhhhhccCCEEEEEECCCC---cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-
Confidence 3689999999986 33333432 1233455656 999998888775 5688877665432
Q ss_pred ceEeeeee--cCC----------------CccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEE
Q psy14815 214 DWINFATL--KSH----------------TSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKC 274 (479)
Q Consensus 214 ~~~~~~~~--~~~----------------~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 274 (479)
+.....+ ... ......+.+++||++|+++. ..+.|.+||+..... .+.
T Consensus 292 -~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~------------~~l 358 (462)
T 2ece_A 292 -WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK------------PVL 358 (462)
T ss_dssp -EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS------------CEE
T ss_pred -eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC------------cEE
Confidence 2222211 110 23467899999999997766 468999999864322 133
Q ss_pred EEEEeccc-------------cccEEEEEecCCCCeEEEEe
Q psy14815 275 VCTLSGHH-------------GRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 275 ~~~~~~~~-------------~~~i~~l~~~~~~~~l~~~~ 302 (479)
+..+.... ...-..++++|||++|+++.
T Consensus 359 v~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 359 TGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 44433210 01357899999999999887
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.15 E-value=8.7e-09 Score=104.79 Aligned_cols=296 Identities=7% Similarity=-0.011 Sum_probs=172.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 5567777788999999999988876654321 134566667789999999886555554432
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEE------CCCeEEEEECCCCeEEEeEEEeCC--C-------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASAS------FDATTAVWDKRSGQFECNATLEGH--E------------------- 134 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~--~------------------- 134 (479)
.. +......+..+| .+..++.++ .+|.|..||.++|+. +..+... .
T Consensus 150 ~~---~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 150 RA---DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE--AWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp CS---CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred cC---CCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE--EEEecccCCCcccccccccccccccccCC
Confidence 10 111111111122 123444443 368999999999973 3333210 0
Q ss_pred ----------CcEEEEEEcCCCCEEEEEeCCCc-------------------EEEEEeCCCCceeeeeeeeccc------
Q psy14815 135 ----------NEVKSVTWSKNGQFLATCSRDKS-------------------VWVWEVGEEDEYECAAVINAHI------ 179 (479)
Q Consensus 135 ----------~~v~~l~~~~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~~~------ 179 (479)
..-..++++|+...++.++.++. |..+|.++++..-..+ ...|.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~-~~~~d~wd~~~ 303 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ-TTPGDAWDYTA 303 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE-SSTTCCSCCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee-cCCcccccccC
Confidence 01125788888889999988764 9999999885322221 11121
Q ss_pred -cceeEEEEecCCC---EEEEEEcCCcEEEEecCCcccceEeeee------------------------ecCCCc-----
Q psy14815 180 -QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADWINFAT------------------------LKSHTS----- 226 (479)
Q Consensus 180 -~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------------~~~~~~----- 226 (479)
.+........+|+ .++.++.+|.++++|.++++..+..... ......
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 1122222223554 7889999999999999988753211000 000000
Q ss_pred ------cEEEEEEccCCCEEEEeeCC---------------------------------------------CeEEEEecc
Q psy14815 227 ------TVWSLAFDRIGSRLATCSDD---------------------------------------------ATVKIWKEY 255 (479)
Q Consensus 227 ------~v~~~~~~~~~~~l~s~~~d---------------------------------------------g~i~iwd~~ 255 (479)
.-..++|+|+...+++.+.+ |.|+.||+.
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 01136888888888876544 344444442
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccc
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 335 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~ 335 (479)
++ +.+-++..+ .+...-.+...+.++++++.||.++.||.++++ ++.+...++.
T Consensus 464 tG---------------~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~---------~lw~~~~~~~ 517 (689)
T 1yiq_A 464 KQ---------------QAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE---------KLWEQPAASG 517 (689)
T ss_dssp TT---------------EEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---------EEEEEECSSC
T ss_pred CC---------------CeEeEccCC--CCccCccceECCCEEEEECCCCcEEEEECCCCc---------cceeeeCCCC
Confidence 22 223233222 222333455567789999999999999999998 4444433333
Q ss_pred cceeEEEecCCCCCC
Q psy14815 336 QDVNCVAWNPVVPEP 350 (479)
Q Consensus 336 ~~v~~~~~sp~~~~l 350 (479)
....-+.|+.+|+..
T Consensus 518 ~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQY 532 (689)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cccCceEEEECCEEE
Confidence 333457778888743
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=4.5e-09 Score=106.67 Aligned_cols=296 Identities=5% Similarity=-0.044 Sum_probs=175.5
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|..+....+....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 4466777778899999999888776554321 234566667788899999886554444321
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCCCC--------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGHEN-------------------- 135 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-------------------- 135 (479)
.........+. -+| .+..++.++. ++.|+.+|..+|+. +..+.....
T Consensus 157 ~~~~~~~~~~~---~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 157 FEGQKGSLTIT---GAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER--KWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp TTTCCSSCBCC---SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred CcCcCcCcccc---cCcEEECCEEEEEecccccCCCCEEEEEECCCCcE--EEEeccCCCCccccccccccccccccccc
Confidence 10000001111 111 2345555543 68999999999974 333332111
Q ss_pred ------------cEEEEEEcCCCCEEEEEeCCC-------------------cEEEEEeCCCCceeeeeeeeccc-----
Q psy14815 136 ------------EVKSVTWSKNGQFLATCSRDK-------------------SVWVWEVGEEDEYECAAVINAHI----- 179 (479)
Q Consensus 136 ------------~v~~l~~~~~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~----- 179 (479)
....+++++++..++.++.++ .|..+|.++++..-..+ ...|.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~-~~~~d~wd~~ 310 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ-ETPGDNWDYT 310 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE-SSTTCCSCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe-cCCCcccccc
Confidence 113578888888899887764 49999999885322222 11221
Q ss_pred --cceeEEEEecCC---CEEEEEEcCCcEEEEecCCcccceEeeee-------ecCCCccE-------------------
Q psy14815 180 --QDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFAT-------LKSHTSTV------------------- 228 (479)
Q Consensus 180 --~~v~~l~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~v------------------- 228 (479)
.....+....+| +.++.++.+|.++++|..+++..+..... +.....++
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 112223333467 68999999999999999988753322100 00000011
Q ss_pred -----EEEEEccCCCEEEEeeCC-------------------------------------------CeEEEEeccCCCCC
Q psy14815 229 -----WSLAFDRIGSRLATCSDD-------------------------------------------ATVKIWKEYKPGNS 260 (479)
Q Consensus 229 -----~~~~~~~~~~~l~s~~~d-------------------------------------------g~i~iwd~~~~~~~ 260 (479)
..++++|++..+++...+ |.|..||+.++
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--- 467 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--- 467 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---
Confidence 156889988888876543 44555555322
Q ss_pred CCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeE
Q psy14815 261 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
+.+-++.. ..++....+...+.+++.++.||.+++||..+++ ++..+..++.....-
T Consensus 468 ------------~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~---------~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 468 ------------KAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---------KLWEAPTGTGVVAAP 524 (677)
T ss_dssp ------------EEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---------EEEEEECSSCCCSCC
T ss_pred ------------cEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc---------eeeeeeCCCCcccCC
Confidence 22222221 2234444556677888889999999999999998 454443344334455
Q ss_pred EEecCCCCCC
Q psy14815 341 VAWNPVVPEP 350 (479)
Q Consensus 341 ~~~sp~~~~l 350 (479)
+.|+++|+..
T Consensus 525 ~~y~~~G~~~ 534 (677)
T 1kb0_A 525 STYMVDGRQY 534 (677)
T ss_dssp EEEEETTEEE
T ss_pred EEEEeCCEEE
Confidence 6777888644
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=1.5e-08 Score=94.26 Aligned_cols=240 Identities=11% Similarity=0.001 Sum_probs=143.9
Q ss_pred CcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeE----EEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEE
Q psy14815 91 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNA----TLEGHENEVKSVTWSKNGQFLATCSR-----DKSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~----~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~ 159 (479)
..+..++++++|+.+++... ++.++||.+.+++..... ....+-..+..++++++++++++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 68899999999999888642 342555554455422110 01124467999999999875555433 57899
Q ss_pred EEEeCCCCceeeeeeee------ccccceeEEEEecCC-CEEEEEE---cCCcEEEEecCCcccceEeeeeecCC-----
Q psy14815 160 VWEVGEEDEYECAAVIN------AHIQDVKKVRFHPFD-NILASAS---YDDTVKLFKEDKAEADWINFATLKSH----- 224 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~------~~~~~v~~l~~~~~~-~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~----- 224 (479)
+||+.+++. ...+. .+...+..+++++++ ..+++.. .++.|.+||..+++. ...+..|
T Consensus 97 ~~d~~tg~~---~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~----~r~~~~~~~~~~ 169 (343)
T 2qe8_A 97 AWDTLNNQL---SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA----ARVLQGYPGIAP 169 (343)
T ss_dssp EEETTTTEE---EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE----EEECTTCTTTSC
T ss_pred EEECCCCeE---EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE----EEEecCCCcccc
Confidence 999987632 22222 122346899999865 4445544 678999999876542 1111111
Q ss_pred ------------------------CccEEEEEEccCCCEEEEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 225 ------------------------TSTVWSLAFDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 225 ------------------------~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
...+..++|+|+++.|+.+..++ .+..++........ +. .......+. ..
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~-~~---~~~~~~~~~-~~ 244 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ-LT---DAELGSKIE-RY 244 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT-CC---HHHHHTTCE-EE
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC-CC---hhhhhcceE-ec
Confidence 12368899999999998887766 44444432111000 00 000000000 11
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
++ ......++++++|.++++...++.|.+||...++ +..+.. ..+...+.+++|.|++..+..
T Consensus 245 g~-~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-------~~~~~~--~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 245 SE-KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-------YKLLVT--DEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp EE-CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-------EEEEEE--CGGGSCEEEEEECTTSCEEEE
T ss_pred cc-CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-------EEEEEE--CCceecCCeeEECCCCcEEEE
Confidence 11 2245678999999999998889999999984443 111211 123456889999999875533
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=6e-11 Score=111.55 Aligned_cols=182 Identities=14% Similarity=0.068 Sum_probs=98.7
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc-
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI- 179 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~- 179 (479)
++..+++++.||.|..||..+|+ .+..+.. +.+.+..+..++..+++++.||.|+.||..+++.... ...+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK---LPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE---CSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee---eeccCc
Confidence 57789999999999999999997 3445544 4455555556777888888999999999987643211 11111
Q ss_pred ccee-EEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 180 QDVK-KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 180 ~~v~-~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
..+. +..+. .+..+++++.++.++.||..+++..| .+..+. ...++|++..+++++.|+.|+.||...+.
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w----~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ----TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE----EecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 1110 11111 34567888899999999999887633 222222 23456788899999999999999987654
Q ss_pred CCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---CeEEEEeCCCeEEEcccCCCC
Q psy14815 259 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.. |... ... .....+..+. ..+++++.||.++.||..+++
T Consensus 152 ~~-----------W~~~--~~~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 152 LR-----------WNAT--YFD-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CC-----------CEEE--EEE-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EE-----------EeEe--ccc-----ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 32 2211 111 1122333332 467778899999999999887
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=1.8e-08 Score=102.27 Aligned_cols=258 Identities=8% Similarity=0.045 Sum_probs=160.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC-C-------------ccceEEEeec------CCcEEEecCCCCCCceee
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL-P-------------VETSLRQLVE------DKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-~-------------~~~~~~~~~~------~~~i~~w~~~~~~~~~~~ 81 (479)
++..++.++.|+.|..+|..+|+.+.++... . .+..++.... ++.+..+|..+....+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567888888999999999999887665432 1 1233444332 578999998865544443
Q ss_pred eEEecc---------------------------ccCCcEEEEEECCCCCEEEEEECCC-------------------eEE
Q psy14815 82 KAILSD---------------------------GHQRTIRETAWSPCGNFIASASFDA-------------------TTA 115 (479)
Q Consensus 82 ~~~~~~---------------------------~~~~~v~~v~~~~~~~~l~t~~~dg-------------------~i~ 115 (479)
...... +.......++++|++..++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 321100 1111223578888888988887664 599
Q ss_pred EEECCCCeEEEeEEEeCCC-------CcEEEEEEcCCC---CEEEEEeCCCcEEEEEeCCCCceeeeeeee--------c
Q psy14815 116 VWDKRSGQFECNATLEGHE-------NEVKSVTWSKNG---QFLATCSRDKSVWVWEVGEEDEYECAAVIN--------A 177 (479)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------~ 177 (479)
.+|..+|+..-......|. .....+....+| ..++.++.+|.+.++|.++++.......-. .
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 9999999844333333231 122223333467 679999999999999999885432211000 0
Q ss_pred cccce------------------------eEEEEecCCCEEEEEEcC---------------------------------
Q psy14815 178 HIQDV------------------------KKVRFHPFDNILASASYD--------------------------------- 200 (479)
Q Consensus 178 ~~~~v------------------------~~l~~~~~~~~l~~~~~d--------------------------------- 200 (479)
...++ ..++|+|++.++++...+
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 00011 257889988888776432
Q ss_pred ----------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 201 ----------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 201 ----------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
|.|..||+.+++..|... +..++....+...+..++.++.||.+++||..++
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~-----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG------------- 508 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVE-----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG------------- 508 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEE-----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC-------------
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecC-----CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC-------------
Confidence 779999999887654432 2223334456667888999999999999998544
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+.+.++.........-+.|..+|+.++
T Consensus 509 --~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 509 --EKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp --CEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred --ceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 445555543233333455667776433
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.06 E-value=8.3e-07 Score=79.12 Aligned_cols=222 Identities=9% Similarity=0.065 Sum_probs=136.5
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 168 (479)
..+..++|++++..|+.+. .++.|..+++.++.. .............+++++++..++.+. ..+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 4578999999766665554 568999999987642 222332335678999999766666554 467899999875421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEc---CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
..+ ..........++++|++..|..+.. .+.|..+++..... ..+ ..........++++++++.|+.+.
T Consensus 114 -~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~~~--~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 114 -RVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RIL--AQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp -EEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EEE--ECTTCSCEEEEEEETTTTEEEEEET
T ss_pred -EEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--EEE--EECCCCCCcEEEEcCCCCEEEEEEC
Confidence 111 1111235688999996655555543 36888888764332 111 112234578999999877765544
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
..+.|.++|.... .....+.+ ......++.. .+.++++...++.|..+|..+++
T Consensus 187 ~~~~I~~~~~~g~---------------~~~~~~~~--~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~-------- 240 (267)
T 1npe_A 187 GTHRAECLNPAQP---------------GRRKVLEG--LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK-------- 240 (267)
T ss_dssp TTTEEEEEETTEE---------------EEEEEEEC--CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE--------
T ss_pred CCCEEEEEecCCC---------------ceEEEecC--CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC--------
Confidence 5678999987321 11112222 2234566654 34444444456899999998876
Q ss_pred EEEeccccccccceeEEEecCCCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
.+..+..+.......+++.|++.
T Consensus 241 -~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 241 -EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEEECCSSCCCCCCEEEECSCC
T ss_pred -ceEEEccccccccceeeecCccC
Confidence 34444333323477889998864
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.04 E-value=3.6e-08 Score=92.16 Aligned_cols=228 Identities=9% Similarity=0.029 Sum_probs=144.5
Q ss_pred CCCCEEEEEE-CCCeEEEEECCCC--eEEEeEEEe-------CCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEe
Q psy14815 100 PCGNFIASAS-FDATTAVWDKRSG--QFECNATLE-------GHENEVKSVTWSKNGQFLATCSRD------KSVWVWEV 163 (479)
Q Consensus 100 ~~~~~l~t~~-~dg~i~iwd~~~~--~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd~ 163 (479)
+++++|+..+ .+++|.++|+.+. +......++ .-......+..+|+| .++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777776654 4689999999754 333444442 111245567888999 76666655 78999999
Q ss_pred CCCCceeeeeeeecc--c-cceeEEEEecCCCEEEEEE-------------------cCCcEEEEecCCcccceEeeeee
Q psy14815 164 GEEDEYECAAVINAH--I-QDVKKVRFHPFDNILASAS-------------------YDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~--~-~~v~~l~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
.+.+ .+..+... . .--..+.|+|+++.+++.. .+.+|.+||+.+++. +.++
T Consensus 172 ~T~~---v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~----~~tI 244 (462)
T 2ece_A 172 YSFE---PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR----IHSL 244 (462)
T ss_dssp TTCC---EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE----EEEE
T ss_pred CCCe---EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE----eeEE
Confidence 9874 33333321 1 1234578899999888885 368899999987542 3334
Q ss_pred cC--CCccEEEEEE--ccCCCEEEEee------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc---------
Q psy14815 222 KS--HTSTVWSLAF--DRIGSRLATCS------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------- 282 (479)
Q Consensus 222 ~~--~~~~v~~~~~--~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 282 (479)
.. .......+.| +|++++++.++ .+++|.+|....+ .+.....+.-..
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-------------~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-------------KWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-------------EEEEEEEEEECCEECCSSCCG
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-------------ceeEEEEEeCCCccccccccc
Confidence 32 1233445656 99999987776 4668888776421 122222221000
Q ss_pred --------cccEEEEEecCCCCeEEEEeC-CCeEEEcccCCCCCCCCceeeEEEeccccc-------c------ccceeE
Q psy14815 283 --------GRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRA-------H------NQDVNC 340 (479)
Q Consensus 283 --------~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~-------h------~~~v~~ 340 (479)
......+.+++||++|.++.. .+.|.+||+..... ..++..+..+ | .+....
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~------~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK------PVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS------CEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC------cEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 235788999999998887766 68999999863321 1123333222 1 113688
Q ss_pred EEecCCCCCCCccc
Q psy14815 341 VAWNPVVPEPQKTN 354 (479)
Q Consensus 341 ~~~sp~~~~l~~~~ 354 (479)
+++||||++|..+.
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 99999999987665
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=1.8e-10 Score=108.27 Aligned_cols=181 Identities=9% Similarity=-0.005 Sum_probs=97.8
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 101 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 101 (479)
++..+++++.||.|..||..+|+.+.++.. ..+.+..+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------------------------------------~~~~s~p~~~~ 48 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------------------------------------DPVLQVPTHVE 48 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---------------------------------------CCSCCCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---------------------------------------CCceecceEcC
Confidence 577899999999999999988887544311 12222233456
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC-cEE-EEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHEN-EVK-SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~-~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 179 (479)
+..+++++.||.|+.||.++++. +.....+.. .+. +..+. ++..+++++.++.++.||.++++. ...+..+.
T Consensus 49 g~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~---~w~~~~~~ 122 (369)
T 2hz6_A 49 EPAFLPDPNDGSLYTLGSKNNEG--LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEK---QQTLSSAF 122 (369)
T ss_dssp -CCEEECTTTCCEEEC-----CC--SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------
T ss_pred CCEEEEeCCCCEEEEEECCCCce--eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcE---EEEecCCC
Confidence 77788888999999999988862 233332211 010 00111 345688888999999999998743 33333222
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC---CEEEEeeCCCeEEEEeccC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~ 256 (479)
...++|++..+++++.++.|+.||.++++..|..... . .....++.+. ..+++++.||.|+.||...
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEE--E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--c----ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 2345678889999999999999999988765443211 1 1122333322 5677888999999999854
Q ss_pred C
Q psy14815 257 P 257 (479)
Q Consensus 257 ~ 257 (479)
+
T Consensus 193 G 193 (369)
T 2hz6_A 193 G 193 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=8.9e-08 Score=90.46 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=69.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeee----------ccccceeEEEEecCCCEEEEEEc----------C
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN----------AHIQDVKKVRFHPFDNILASASY----------D 200 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~----------~~~~~v~~l~~~~~~~~l~~~~~----------d 200 (479)
.|.+++..++..+..+.+.+.|+..... .....+. ........++++|+++.+++... +
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~-~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGA-TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCE-EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCce-EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 4455666555555666777777754321 1111110 01112223789999887777643 3
Q ss_pred CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEEEee-CCCeEEEEeccCC
Q psy14815 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCS-DDATVKIWKEYKP 257 (479)
Q Consensus 201 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~ 257 (479)
+.|.++|..+.+. +..+.. ......+.|+|+++ ++++.. .++.|.++|+...
T Consensus 350 ~~VsVID~~T~kv----v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 350 RFVVVLNAETGER----INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEETTTCCE----EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEECCCCeE----EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 4799999997764 444432 22478899999999 888887 5899999998443
No 238
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.95 E-value=1.4e-08 Score=94.28 Aligned_cols=217 Identities=9% Similarity=-0.053 Sum_probs=131.0
Q ss_pred EEEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--C
Q psy14815 95 ETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-------ENEVKSVTWSKNGQFLATCSR--D 155 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~~--d 155 (479)
.+.++||+++++++. .++.|.+||..+++. +..+... ......+.++|||++++++.. +
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 699999999998886 368999999999974 4444322 123568999999999999875 3
Q ss_pred CcEEE--EEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCC-----cccceEeeeeecCCCcc
Q psy14815 156 KSVWV--WEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDK-----AEADWINFATLKSHTST 227 (479)
Q Consensus 156 g~i~v--wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~~~~~ 227 (479)
..+.+ +|..+ .. .+.. .. +..+.|++ ..+++.+.||.+.+.|+.. ++........+.....+
T Consensus 147 ~~v~V~~iD~~t---v~---~i~v-~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 147 AAAGLSVPGASD---DQ---LTKS-AS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp CEEEEEETTTEE---EE---EEEC-SS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred CeEEEEEEchhh---ce---EEEC-CC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 56888 78765 12 1211 01 11233443 3455667788888888875 22100000011112233
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---------cccccEEEEEecCCCCeE
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------HHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~l~~~~~~~~l 298 (479)
. . ++++..++..+. +.+.+.|...... +.+..+.. ........++++|+++.+
T Consensus 217 ~---~-~~~~~~~~~vs~-~~V~viD~~~~~~-------------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 217 A---Q-ANYPGMLVWAVA-SSILQGDIPAAGA-------------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp E---E-ETTTTEEEECBS-SCCEEEECCSSCC-------------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred c---c-cccCCEEEEEcC-CEEEEEECCCCcc-------------eEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 3 3 566666666666 8999999743211 11111100 001111226899999887
Q ss_pred EEEeC---------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 299 ATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 299 ~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.++.. ++.+.++|+.+.+ .+..+..+ .....++|+|||+++..
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg--~~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNG--HDSDAIIAAQDGASDNY 330 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEE--EEECEEEECCSSSCEEE
T ss_pred EEEeccccCcccccCCCEEEEECCCCe---------EEEEEECC--CCcceEEECCCCCEEEE
Confidence 76543 2356699999987 45555323 26889999999987643
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.94 E-value=1.6e-07 Score=95.47 Aligned_cols=261 Identities=9% Similarity=0.085 Sum_probs=157.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC------------C--ccceEEEee------cCCcEEEecCCCCCCceeee
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL------------P--VETSLRQLV------EDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------------~--~~~~~~~~~------~~~~i~~w~~~~~~~~~~~~ 82 (479)
+..++.++.|+.|..+|..+|+.+..+... + .+..++... .++.+..||..+....+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567888889999999999999887554432 1 022333332 25788889888655544433
Q ss_pred EEecc--------------------------ccCCcEEEEEECCCCCEEEEEECCCe-------------------EEEE
Q psy14815 83 AILSD--------------------------GHQRTIRETAWSPCGNFIASASFDAT-------------------TAVW 117 (479)
Q Consensus 83 ~~~~~--------------------------~~~~~v~~v~~~~~~~~l~t~~~dg~-------------------i~iw 117 (479)
..... +.......++++|++.+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11000 11111235788888889999887764 9999
Q ss_pred ECCCCeEEEeEEEeCCC-------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeeee----ec------
Q psy14815 118 DKRSGQFECNATLEGHE-------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAVI----NA------ 177 (479)
Q Consensus 118 d~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~------ 177 (479)
|..+|+..-......|. .+........+|+ .++.++.+|.++++|.++++........ ..
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 99999843333322232 1222222223564 7889999999999999988543111000 00
Q ss_pred ---------------cc-----------cceeEEEEecCCCEEEEEEc--------------------------------
Q psy14815 178 ---------------HI-----------QDVKKVRFHPFDNILASASY-------------------------------- 199 (479)
Q Consensus 178 ---------------~~-----------~~v~~l~~~~~~~~l~~~~~-------------------------------- 199 (479)
.. ..-..++|+|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 00 00123788998877776532
Q ss_pred -------------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCC
Q psy14815 200 -------------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 266 (479)
Q Consensus 200 -------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 266 (479)
+|.|..||+.+++..|.... + .++..-.+...+..++.++.||.++.||.+++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG--------- 506 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----V-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG--------- 506 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----S-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC---------
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccC----C-CCccCccceECCCEEEEECCCCcEEEEECCCC---------
Confidence 37799999998886544322 2 12222345556889999999999999998554
Q ss_pred CCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeC
Q psy14815 267 DNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACG 303 (479)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~ 303 (479)
+.+-+++........-+.|..+|+ |+++.+.
T Consensus 507 ------~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 507 ------EKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp ------CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ------ccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 445555543222233466677776 4554443
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=6e-07 Score=87.01 Aligned_cols=237 Identities=14% Similarity=0.074 Sum_probs=143.1
Q ss_pred CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEE-C-CCCCEEEEEE------------------CCCeEEEEECCCCe
Q psy14815 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-S-PCGNFIASAS------------------FDATTAVWDKRSGQ 123 (479)
Q Consensus 64 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~-~-~~~~~l~t~~------------------~dg~i~iwd~~~~~ 123 (479)
++.|.+.|+.... ...+........+..+++ + |++.++++++ .++.+.+.|..+.+
T Consensus 111 ~~rVavIdl~t~~----~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 111 NTRVARVRCDVMK----CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp TTEEEEEETTTTE----EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred CCEEEEEECCCce----EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 3457777776321 111112233456788887 5 8999998885 24689999999987
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEEeCC
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDK--------------------------------------SVWVWEVGE 165 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--------------------------------------~i~vwd~~~ 165 (479)
. ..++.--. ....++++|+|+++++.+.+. .|.+.|.++
T Consensus 187 v--~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 187 V--AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp E--EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred E--EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 3 33333211 345678999999999988653 356666665
Q ss_pred CCceee-eeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc--------ceEeeeeecCCCccEEEEEEcc
Q psy14815 166 EDEYEC-AAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA--------DWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 166 ~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.+. .. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+. ......... -......++|++
T Consensus 264 ~~~-~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~ 340 (595)
T 1fwx_A 264 EAS-SLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG 340 (595)
T ss_dssp GGC-CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT
T ss_pred cCC-ceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC
Confidence 110 11 122221 23456899999999877765 578899999986421 001122222 334578899999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE-----EEEEecCCCCeEEEEeC---CCe-
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI-----YDISWCHLTDLIATACG---DDA- 306 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~l~~~~~~~~l~~~~~---dg~- 306 (479)
+|....+.-.|+.|.+||+....... ..+.....+.++..| ..+- ..+.++|||++|++++. |+.
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~a~~~~-----~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIEDAIRAY-----AGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL 414 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHHHHHHH-----HTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred CCeEEEEEecCCcEEEEEhhHhhhhh-----cccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence 99444566689999999986521000 000112445666654 2221 22356799999998865 332
Q ss_pred ---------EEEcccCCCC
Q psy14815 307 ---------IRIFKENPEA 316 (479)
Q Consensus 307 ---------i~vw~~~~~~ 316 (479)
-.++|+..++
T Consensus 415 ~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 415 NVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCSSCCEEEEEEECSSSS
T ss_pred cCCCCCCCcceEEEcCCCc
Confidence 2788885544
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=9.6e-07 Score=81.14 Aligned_cols=258 Identities=9% Similarity=-0.006 Sum_probs=145.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC-CCceeeeE---Eecc
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF-GNKFTAKA---ILSD 87 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~-~~~~~~~~---~~~~ 87 (479)
....+++|+++++++.++..++.|..|+..++... .+ ..... ........ ....
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~---------------------~~~~~~~~~~~~~g~~~~~~~ 76 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DF---------------------AYASPYWNKAFCENSTDAEKR 76 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EE---------------------EESCTTCCHHHHTTCCCGGGH
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EE---------------------ecccccccccccccccchhcc
Confidence 45677899999988888888899999986543221 11 00000 00000000 0000
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE-eC-CCCcEEEEEEcC-CCCEEEEEeC----------
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-EG-HENEVKSVTWSK-NGQFLATCSR---------- 154 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~v~~l~~~~-~~~~l~~~~~---------- 154 (479)
.....+..+++.+++..|+.+...+.|..+|..++........ .+ .......+++.+ +|+..++-..
T Consensus 77 ~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 77 PLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp HHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred ccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 1123578899997334555565556688898876642222111 11 113468899999 8876665432
Q ss_pred -------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCccc-ceEeeeeecCCC
Q psy14815 155 -------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEA-DWINFATLKSHT 225 (479)
Q Consensus 155 -------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~-~~~~~~~~~~~~ 225 (479)
++.|..||..+.+. . .+.........++++|+++.|..+ +..+.|..|++..... .......+ .
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~-~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~ 229 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKET-T---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---P 229 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEE-E---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---S
T ss_pred ehcccCCCceEEEEeCCCCEE-E---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---C
Confidence 36688888765421 1 111112335679999999866655 5568999999875321 11122222 2
Q ss_pred ccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc---cccEEEEEec
Q psy14815 226 STVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH---GRTIYDISWC 292 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~l~~~ 292 (479)
+ ...++++++|++.++... .+.|..+|.. ++.+..+.... -..++.+++
T Consensus 230 g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~----------------G~~~~~~~~~~g~~~~~~~~~~~- 291 (322)
T 2fp8_A 230 N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF----------------GNILEVIPLPPPFAGEHFEQIQE- 291 (322)
T ss_dssp S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT----------------SCEEEEEECCTTTTTSCCCEEEE-
T ss_pred C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC----------------CCEEEEEECCCCCccccceEEEE-
Confidence 3 778999999987666544 3567777642 12233333221 234666666
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.++.++++...++.|..+++....
T Consensus 292 ~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 292 HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp ETTEEEEECSSCSEEEEEEC----
T ss_pred eCCEEEEeecCCCceEEEeccccc
Confidence 456666666677889999876543
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.84 E-value=3.5e-06 Score=79.21 Aligned_cols=258 Identities=7% Similarity=-0.041 Sum_probs=148.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
++..++.++.++.|..+|..+++.+...... ..+..++....++.+..+|..+....+..............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 3567778888999999999998876544322 11345666677888999988754433332211000000000
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc-----EEEEEEcC--CCCEEEEEeCCCcEEEEEeCCC
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-----VKSVTWSK--NGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..... .+..++.++.++.+..+|..+++..-.......... +..+.-.| .+..++.++.++.+..+|.+++
T Consensus 182 ~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 11111 245788888899999999999874332222211000 00011111 3467888888999999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
+.. .... ......+.. ++..++.++.++.+..+|..+++..|... ......+...... +..|+.++.+
T Consensus 260 ~~~---w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~---~~~~~~~~~~~~~--~~~l~v~~~~ 327 (376)
T 3q7m_A 260 QIM---WKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQS---DLLHRLLTSPVLY--NGNLVVGDSE 327 (376)
T ss_dssp CEE---EEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEEC---TTTTSCCCCCEEE--TTEEEEECTT
T ss_pred cEE---eecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeec---ccCCCcccCCEEE--CCEEEEEeCC
Confidence 432 2211 122333433 36678888899999999999887543321 0111122222222 5678889999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE-EEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
|.|..+|...+. .+...... ...+. .... .+..|+.++.+|.|+.|+
T Consensus 328 g~l~~~d~~tG~---------------~~~~~~~~-~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 328 GYLHWINVEDGR---------------FVAQQKVD-SSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp SEEEEEETTTCC---------------EEEEEECC-TTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CeEEEEECCCCc---------------EEEEEecC-CCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 999999985542 23333321 11221 1111 245677888899998886
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.84 E-value=2.4e-06 Score=80.37 Aligned_cols=258 Identities=7% Similarity=0.011 Sum_probs=151.0
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCC------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLP------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
++..+++++.++.|..+|..+++.+....... .+..+.....++.+..+|.++....+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 35678888889999999999888765544311 123455566778888888875443333221
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-----EEEEEcCCCCEEEEEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-----KSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----~~l~~~~~~~~l~~~~~dg~i 158 (479)
.. .....++ . .+..++.++.++.|..+|..+++.. .......... ..... .+..+++++.++.+
T Consensus 132 ~~-~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~--W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l 200 (376)
T 3q7m_A 132 AG-EALSRPV----V--SDGLVLIHTSNGQLQALNEADGAVK--WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRV 200 (376)
T ss_dssp SS-CCCSCCE----E--ETTEEEEECTTSEEEEEETTTCCEE--EEEECCC-----CCCCCCEE--ETTEEEECCTTTEE
T ss_pred CC-ceEcCCE----E--ECCEEEEEcCCCeEEEEECCCCcEE--EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEE
Confidence 00 0011111 1 2457888889999999999999733 3333221110 11122 24568888889999
Q ss_pred EEEEeCCCCceeeeeeeecccc-----ceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~-----~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
..+|..+++..-... ...... .+..+...| .+..++.++.++.+..+|..+++..|.. . ......+
T Consensus 201 ~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~----~--~~~~~~~ 273 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR----E--LGSVNDF 273 (376)
T ss_dssp EEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE----C--CCCEEEE
T ss_pred EEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec----c--CCCCCCc
Confidence 999998874322111 110000 000011111 2467778888999999999988753332 1 1223444
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
.. ++..++.++.++.|..+|...+.. +-.........+..... .+..|+.++.+|.+.++|
T Consensus 274 ~~--~~~~l~~~~~~g~l~~~d~~tG~~---------------~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 274 IV--DGNRIYLVDQNDRVMALTIDGGVT---------------LWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp EE--ETTEEEEEETTCCEEEEETTTCCE---------------EEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred eE--ECCEEEEEcCCCeEEEEECCCCcE---------------EEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 44 366788888899999999855432 22222111111222222 245788888999999999
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+++
T Consensus 335 ~~tG~ 339 (376)
T 3q7m_A 335 VEDGR 339 (376)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 99887
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.81 E-value=2.8e-07 Score=84.91 Aligned_cols=179 Identities=11% Similarity=-0.002 Sum_probs=113.1
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccc
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
+..+..++.++.+..+|.. ++ ...........+.++...+++. ++.++.++.+..+|.. ++ ...........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~---~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT--EKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT---EKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC---EEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CC--EEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC---EeEEEecCCCc
Confidence 5578888889999999988 65 3344444455566777776766 6677788999999988 43 22233333445
Q ss_pred eeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC
Q psy14815 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 261 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 261 (479)
+.++...+++.+.+ ++ +.|..+| .++.. ..........+.++...+++. +..++.++.|..+|. ..
T Consensus 179 ~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g---- 244 (330)
T 3hxj_A 179 TSAASIGKDGTIYF-GS--DKVYAIN-PDGTE----KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DG---- 244 (330)
T ss_dssp CSCCEECTTCCEEE-ES--SSEEEEC-TTSCE----EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TS----
T ss_pred eeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE----EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CC----
Confidence 67777777777554 44 7899999 55443 233333445677888887765 556677788888863 11
Q ss_pred CCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 262 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+..+... ...+..+.+.+++ .|..++.+|.|..+|. +++
T Consensus 245 -----------~~~~~~~~~-~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 245 -----------TEKWRFKTG-KRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp -----------CEEEEEECS-SCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred -----------CEeEEeeCC-CCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence 112222222 2233445555555 4666778889999985 443
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.78 E-value=2.8e-06 Score=74.57 Aligned_cols=198 Identities=9% Similarity=0.030 Sum_probs=126.8
Q ss_pred ceEEEEECCCCCeEEEeeC--CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 13 RVWNVSWNPQGTMISSCGE--DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
....+.|++++.++++.+. +++|++.|+.+++.+..+.. .. .
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-----------------------------------~~-~ 65 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-----------------------------------DD-S 65 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-----------------------------------CT-T
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-----------------------------------CC-C
Confidence 3679999998765565553 57999999999887665421 01 1
Q ss_pred CcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
.....+++. ++.|+ +.-.++.+.++|..+.+ .+..+...... ...+++|++.++++..++.|.++|..+.+..
T Consensus 66 ~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~--v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 66 YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS--NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLI 139 (266)
T ss_dssp CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEE
T ss_pred cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEE
Confidence 111234444 44454 44457899999999987 34445422111 2335567888888778889999999887543
Q ss_pred eeeeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------------CCccEEEEEEc
Q psy14815 170 ECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-------------HTSTVWSLAFD 234 (479)
Q Consensus 170 ~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~ 234 (479)
..+..-.. .-...+.+.|. ++...+....++.|.+.|..+++. +..+.. .......++|+
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V----~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL----LGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE----EEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE----EEEEECCCcccccccccccccCceEEEEEc
Confidence 33332211 11135678888 675555554678999999998774 222221 11356899999
Q ss_pred cCCCEE-EEeeCCCeEEEEeccCC
Q psy14815 235 RIGSRL-ATCSDDATVKIWKEYKP 257 (479)
Q Consensus 235 ~~~~~l-~s~~~dg~i~iwd~~~~ 257 (479)
|+++.+ +++...+.+.+.++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 998765 55557788888887543
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.76 E-value=4.8e-06 Score=73.06 Aligned_cols=197 Identities=7% Similarity=-0.012 Sum_probs=123.7
Q ss_pred CcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 167 (479)
.....+.|++++.+.++.+. ++.|.++|+.+++......+..+ .....+++. +..++.+. .++.+.++|..+.+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 34689999998754454443 57999999999985443333332 223355554 45555554 57899999998873
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--C---CccEEEEEEccCCCEEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--H---TSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~s 242 (479)
.+..+..... ....++++++.++++..++.|.++|..+.+. ...+.- . -..++.+.|. ++...+.
T Consensus 98 ---v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v----~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 98 ---NIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKL----IKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp ---EEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred ---EEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcE----EEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 3444432201 1233556787777777788999999987653 222221 1 1236678887 6654444
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCe-EEEEeCCCeEEE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL-IATACGDDAIRI 309 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~-l~~~~~dg~i~v 309 (479)
...++.|.+.|.... +.+..+... .....+.++|+|+++. ++++...+.+.+
T Consensus 168 ~~~~~~V~vID~~tg---------------~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 168 IWQTDCIARISAKDG---------------TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp ETTSSEEEEEETTTC---------------CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred cCCCCeEEEEECCCC---------------cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 446789999998544 444555421 0135689999999875 455556678877
Q ss_pred cccCCC
Q psy14815 310 FKENPE 315 (479)
Q Consensus 310 w~~~~~ 315 (479)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 776543
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.75 E-value=1.7e-07 Score=90.69 Aligned_cols=237 Identities=9% Similarity=-0.007 Sum_probs=143.1
Q ss_pred CCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE-c-CCCCEEEEEeC------------------CCcEE
Q psy14815 101 CGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTW-S-KNGQFLATCSR------------------DKSVW 159 (479)
Q Consensus 101 ~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~-~-~~~~~l~~~~~------------------dg~i~ 159 (479)
||++++.... ++.|.+.|+.+.+...+..+.. ......+++ + |+++++++++. ++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7788877665 4579999999997444444442 345788888 5 89999998852 35789
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC--------------------------------------
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------------------------------------- 201 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-------------------------------------- 201 (479)
+.|..+. +...++.--. ....++++|+|+++++.+.+.
T Consensus 179 vID~~t~---~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKW---EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTT---EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCC---eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 9999876 3333333212 345688999999999888653
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCC--CCCCCCCCCCceEEEEEE
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNS--AGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~ 278 (479)
.|.+.|.++.+.. ..+..+. -.....++.++|||+++++++ .+.+|.++|+.+.... ..+ ..........
T Consensus 255 ~V~VID~~~~~~~-~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l-----~~~~~v~~~v 327 (595)
T 1fwx_A 255 GVKVVDGRKEASS-LFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA-----DPRSAVVAEP 327 (595)
T ss_dssp TEEEEECSGGGCC-SSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-----CGGGGEEECC
T ss_pred cEEEEeCcccCCc-eeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc-----CcccceEEEc
Confidence 3555565541100 0011111 112345789999999887655 6789999998743100 000 0111223333
Q ss_pred eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC----CCCCceeeEEEeccc----cccccceeEEEecCCCCCC
Q psy14815 279 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA----GDSDMVSFDLVHTEH----RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 279 ~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l 350 (479)
.. +.....++|+|+|...++.-.|+.|.+||++... +.... +.+..+. .+|...-.....+|||++|
T Consensus 328 ~v--G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~---~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 328 EL--GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVD---PIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp BC--CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCC---CEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred CC--CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccc---eeEEEeecccccccceeccceEeCCCCCEE
Confidence 32 5578899999999444555669999999998721 00000 1222221 1333222344678999998
Q ss_pred Cccc
Q psy14815 351 QKTN 354 (479)
Q Consensus 351 ~~~~ 354 (479)
....
T Consensus 403 ~~~N 406 (595)
T 1fwx_A 403 VCLS 406 (595)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 5543
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.74 E-value=1.5e-05 Score=70.95 Aligned_cols=221 Identities=10% Similarity=0.008 Sum_probs=128.8
Q ss_pred cceEEEEECCCCCeEEEe-eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSC-GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+.+++|++++..|+.+ ...+.|..++...+.... . .....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------------------------------~-~~~~~ 78 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT------------------------------------I-IRQDL 78 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE------------------------------------E-ECTTC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE------------------------------------E-EECCC
Confidence 345678888865555444 456778888764322110 0 01122
Q ss_pred CcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEEeCCC
Q psy14815 91 RTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEE 166 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~~~~ 166 (479)
.....+++++++..++.+ ...+.|.++++...... ............++++|++..|+.+.. .+.|..+++...
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE--EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 467889999976655555 45679999998754321 122222246789999997666666654 367888887654
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
.. ..+ ..........++++|++..|..+. ..+.|..+|...... ...... ......++.. +..++.+.
T Consensus 157 ~~-~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~----~~~~~~-~~~P~gi~~d--~~~lyva~~ 226 (267)
T 1npe_A 157 NR-RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR----RKVLEG-LQYPFAVTSY--GKNLYYTDW 226 (267)
T ss_dssp CC-EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE----EEEEEC-CCSEEEEEEE--TTEEEEEET
T ss_pred Cc-EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce----EEEecC-CCCceEEEEe--CCEEEEEEC
Confidence 21 111 112223568899999876655544 567899999875332 111122 2234566654 44555444
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
..+.|..+|... ++.+.++..........+++.|++.
T Consensus 227 ~~~~v~~~d~~~---------------g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 227 KTNSVIAMDLAI---------------SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEETTT---------------TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCeEEEEeCCC---------------CCceEEEccccccccceeeecCccC
Confidence 567899998733 2445555432122356677777653
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.70 E-value=1.3e-06 Score=80.35 Aligned_cols=263 Identities=11% Similarity=-0.025 Sum_probs=156.2
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCce
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
..+...+.++...+++.++ .++.+ +..+|. +++.+..+.... .+..+..+..++.+..++.. ....+
T Consensus 56 ~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~ 130 (330)
T 3hxj_A 56 KSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKW 130 (330)
T ss_dssp CGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEE
T ss_pred ecCCCcccceEEecCCcEE-EecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEE
Confidence 3345567888888877644 44444 999996 666655543221 13345555567778888876 22221
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.. ......+.++...+++. +..++.++.|..+|.. ++ ....+......+.++...+++.. ..++ +.+.
T Consensus 131 ~~-----~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~d~~g~l-~v~t--~~l~ 198 (330)
T 3hxj_A 131 RF-----KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT--EKWRFKTNDAITSAASIGKDGTI-YFGS--DKVY 198 (330)
T ss_dssp EE-----ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECTTCCE-EEES--SSEE
T ss_pred EE-----cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC--EeEEEecCCCceeeeEEcCCCEE-EEEe--CEEE
Confidence 11 12233455566666665 6667788999999998 65 33344444556777777777764 4444 8899
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
.+| .+++ ...........+.++...+++. |..++.++.+..+|.. +.. +.........+.++...+++ .
T Consensus 199 ~~d-~~g~---~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-g~~----~~~~~~~~~~~~~~~~~~~g-~ 267 (330)
T 3hxj_A 199 AIN-PDGT---EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-GTE----KWRFKTGKRIESSPVIGNTD-T 267 (330)
T ss_dssp EEC-TTSC---EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-SCE----EEEEECSSCCCSCCEECTTS-C
T ss_pred EEC-CCCc---EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-CCE----eEEeeCCCCccccceEcCCC-e
Confidence 999 5542 2223333345577888887765 5667778888888753 332 22222223333345555555 5
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..++.+|.|..+|. .. +.+..+... ...+.++...+++. |..++.+|.+++...+..+
T Consensus 268 l~v~t~~ggl~~~d~-~g---------------~~~~~~~~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DG---------------TEKWNFETG-SWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEECTTCEEEEECT-TS---------------CEEEEEECS-SCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred EEEecCCCCEEEECC-CC---------------cEEEEEEcC-CccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 667888888999984 22 112223322 44566777777776 4558889999988766543
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.70 E-value=3.2e-06 Score=85.68 Aligned_cols=184 Identities=7% Similarity=-0.024 Sum_probs=111.3
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 4567777778899999999888776553221 134466666788899999886555554432
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCC---C------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGH---E------------------ 134 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~---~------------------ 134 (479)
.. ......+ .-+| .+..++++.. +|.|..+|.++|+. +..+... .
T Consensus 146 ~~-~~~~~~~---~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 146 TD-PAKPYSI---TGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL--AWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp SC-TTSSCBC---CSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred CC-CCCccee---cCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE--EEEecccCCCCCccccccccccccccCCc
Confidence 10 0000011 1111 1345555543 58999999999974 3333211 0
Q ss_pred ----------CcEEEEEEcCCCCEEEEEeCCCc-------------------EEEEEeCCCCceeeeeeeeccc------
Q psy14815 135 ----------NEVKSVTWSKNGQFLATCSRDKS-------------------VWVWEVGEEDEYECAAVINAHI------ 179 (479)
Q Consensus 135 ----------~~v~~l~~~~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~~~------ 179 (479)
.....+++.++...++.++.++. |..+|.++++..-..+ ...|.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~-~~~~~~wd~~~ 298 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ-VTPGDSWDFTA 298 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE-SSTTCCSCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee-cCCCccccccC
Confidence 01124678888888888887763 8999999885322221 11122
Q ss_pred -cceeEEEEecCCC---EEEEEEcCCcEEEEecCCccc
Q psy14815 180 -QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 180 -~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 213 (479)
.+.....+..+++ .++.++.+|.++++|..+++.
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 2222223333564 688999999999999998875
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.68 E-value=3.9e-06 Score=72.76 Aligned_cols=195 Identities=11% Similarity=0.095 Sum_probs=118.1
Q ss_pred ccccccccc--eEEEEECCCCCeEEEeeCCC--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 5 QTLKGHQGR--VWNVSWNPQGTMISSCGEDK--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 5 ~~l~~h~~~--V~~l~~s~~~~~l~t~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++.+..+...
T Consensus 35 ~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---------------------------- 84 (262)
T 3nol_A 35 HSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---------------------------- 84 (262)
T ss_dssp EEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----------------------------
T ss_pred EEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----------------------------
Confidence 444 35433 4778888 677777777765 8999999988876554210
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
. .-.--.++. +++.|... ..++.+.++|..+.+. +.++..... -..+ +++++.|+.+..++.|.
T Consensus 85 -------~-~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~--~~ti~~~~e-G~gl--t~dg~~L~~SdGs~~i~ 149 (262)
T 3nol_A 85 -------K-RYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ--VRSFNYDGE-GWGL--THNDQYLIMSDGTPVLR 149 (262)
T ss_dssp -------T-TCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE--EEEEECSSC-CCCE--EECSSCEEECCSSSEEE
T ss_pred -------C-ccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE--EEEEECCCC-ceEE--ecCCCEEEEECCCCeEE
Confidence 0 001112233 24444444 4578999999999874 444443221 1233 35677787777778899
Q ss_pred EEEeCCCCceeeeeeee-ccc-cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeeec-------CCCccEE
Q psy14815 160 VWEVGEEDEYECAAVIN-AHI-QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATLK-------SHTSTVW 229 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~-~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~-------~~~~~v~ 229 (479)
++|..+.+....+.... +.. ..++.+.|. +|+..+..-.+..|.+.|..+++..... ...+. .-....+
T Consensus 150 ~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlN 228 (262)
T 3nol_A 150 FLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLN 228 (262)
T ss_dssp EECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEE
T ss_pred EEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceE
Confidence 99998875443333221 111 234567776 6765555546789999999987742111 00011 1124568
Q ss_pred EEEEccCCCEEEEeeC
Q psy14815 230 SLAFDRIGSRLATCSD 245 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~ 245 (479)
.++|+|+++.|+..+.
T Consensus 229 GIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 229 GIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEcCCCCEEEEECC
Confidence 9999999888877764
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=4.8e-05 Score=69.12 Aligned_cols=233 Identities=13% Similarity=0.057 Sum_probs=134.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....++|+++++++++-..++.|..||..... . .+| ....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~---------------------~~~-----------------~~~~ 72 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q---------------------IHA-----------------TVEG 72 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E---------------------EEE-----------------ECSS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E---------------------EEE-----------------eCCC
Confidence 457889999999877776678888888754211 0 011 1123
Q ss_pred cEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC-c
Q psy14815 92 TIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-E 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~-~ 168 (479)
.+..+++.++++++++.... ..|..+|..+++...+.... .......++..+++..+++-..++.|.++|..... .
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 57889999999866655433 24777788888754333332 22234555555555444444458888888876431 0
Q ss_pred eeeee------eeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCC-cccc-eEeeeeecCCCccEEEEEEccCCCE
Q psy14815 169 YECAA------VINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDK-AEAD-WINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 169 ~~~~~------~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
..... .....-...+.+ +|+++.|..+ ...+.|..|++.. +... ....... .....++++++|+.
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCE
Confidence 00000 000111123445 7777655554 4567899999874 2211 1111111 23456899999988
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec---CCCCeEEEEeCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC---HLTDLIATACGDD 305 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~---~~~~~l~~~~~dg 305 (479)
+++....+.|.++|.. + . ...+..+... ....++++|. |+++.|++++..+
T Consensus 226 ~va~~~~~~V~~~~~~-G-~------------~~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 226 YGATHIYNSVVRIAPD-R-S------------TTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECBTTCCEEEECTT-C-C------------EEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EEEeCCCCeEEEECCC-C-C------------EEEEeecccc-cCCceEEEEecccCCCCEEEEECCCC
Confidence 7777777889999852 1 1 0111122221 2468899998 8877766665543
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.64 E-value=6.4e-06 Score=84.79 Aligned_cols=198 Identities=13% Similarity=0.090 Sum_probs=112.0
Q ss_pred ceEEEEEC-CCCCeEEEeeC-C----CcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 13 RVWNVSWN-PQGTMISSCGE-D----KNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 13 ~V~~l~~s-~~~~~l~t~~~-d----g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+...+|| |||++||-+.. + .+|+++|+.++ +.+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~------------------------------------ 218 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK------------------------------------ 218 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC------------------------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc------------------------------------
Confidence 67889999 99998885532 2 24899998877 422100
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeC---CC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSR---DK 156 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~---dg 156 (479)
-......++|+||++.|+....+ ..|..+++.+++......+. ........+.|+|||++|+..+. ..
T Consensus 219 ---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 295 (751)
T 2xe4_A 219 ---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETA 295 (751)
T ss_dssp ---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCE
T ss_pred ---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCc
Confidence 00112357899999888887765 36888898876422122222 23345678899999998887663 34
Q ss_pred cEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeee-ecCCCc--cE
Q psy14815 157 SVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFAT-LKSHTS--TV 228 (479)
Q Consensus 157 ~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~-~~~~~~--~v 228 (479)
.|.++|+.++. ................++.|+..+.+++....+ ..|..+|+.++. .+. . +..+.. .+
T Consensus 296 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~-~~~---~~li~~~~~~~l 371 (751)
T 2xe4_A 296 EVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPS-DWS---HVLVDHSEDVFM 371 (751)
T ss_dssp EEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTT-CCC---CEEECCCSSEEE
T ss_pred eEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcc-cce---eeEECCCCCcEE
Confidence 58888887652 110011122233444555555444444444433 256666765421 111 2 222333 34
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
..+.+. .+..+++...++..++|-+
T Consensus 372 ~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 372 ESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 555554 2334556667776555543
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.62 E-value=1.4e-05 Score=69.23 Aligned_cols=187 Identities=11% Similarity=0.053 Sum_probs=114.1
Q ss_pred CcEEEEEECCCCCEEEEEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 167 (479)
.....+.|+ ++.+..+.+.+| .|+++|+.+++......+. .........++++.|+... .++.+.+||..+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 344788898 676677777766 9999999999854444333 2232322233455566554 47899999999884
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC-ccEEEEEEccCCCEEEEeeCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d 246 (479)
.+..+.... ....++++++.|+.+..++.|.++|..+.+..........+.. ..++.+.|. +|+..+..-.+
T Consensus 119 ---~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 119 ---QVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp ---EEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred ---EEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 333443222 2233345677777777678899999987664211111111111 334567776 56544444467
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------ccccEEEEEecCCCCeEEEEeC
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
+.|.+.|..++ +.+..+... .....+.|+|+|+++.|++.+.
T Consensus 192 ~~I~vIDp~tG---------------~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDPETG---------------KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECTTTC---------------BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCC---------------cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 88999997554 333333321 1346789999999887777765
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.62 E-value=0.0003 Score=73.05 Aligned_cols=299 Identities=9% Similarity=0.027 Sum_probs=176.1
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
|.++...+++.+.+ ++.++.+..|+..+++........ .....+..+..++.+..|+... .......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~--~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKT--KEIKNYL 251 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTT--TEEEEEC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCC--CeEEEee
Confidence 88888888886555 555545888887665432211100 0112233344455677777652 1111111
Q ss_pred Ee----ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-----CCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 84 IL----SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-----GHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 84 ~~----~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
.. ..-....|.++...++|.+.+ |+.+ -|.+||..+++........ -....|.++...++|. |..|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 00 011246799999988886544 5555 5899998887633221110 1235799999988876 667777
Q ss_pred CCcEEEEEeCCCCceeeeeee----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee------cCC
Q psy14815 155 DKSVWVWEVGEEDEYECAAVI----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL------KSH 224 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~ 224 (479)
++-|..|+.....- ...... ......|.++...++|+ |..|+.++-|..||..++.. ...... ...
T Consensus 329 ~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 329 FGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRF--TSYTLQEDESARGIG 404 (795)
T ss_dssp SSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCE--EEECCC------CCS
T ss_pred CCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcE--EEEecCCCCcccCCC
Confidence 78888888765421 111110 01234588999888776 55678887899999876542 111110 012
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec----cccccEEEEEecCCCCeEEE
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG----HHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~ 300 (479)
...|.++...++++.|..|+.++-|..||...... ..+.. .....|.++...+++.+.+.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~----------------~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV----------------ENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE----------------EEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE----------------EEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 46799999988887566777777799998644321 11110 12457899999888876665
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccc------cccccceeEEEecCCCCCC
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEH------RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~sp~~~~l 350 (479)
. . +.+..|+..+++ ..... ......|.++...++|...
T Consensus 469 t-~-~Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 469 T-L-SALVRFNPEQRS----------FTTIEKEKDGTPVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp E-S-SCEEEEETTTTE----------EEECCBCTTCCBCCCCCEEEEEECTTCCEE
T ss_pred e-c-CceeEEeCCCCe----------EEEccccccccccCCceEEEEEECCCCCEE
Confidence 4 3 458888877654 22111 1123567888888877644
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.59 E-value=3.2e-06 Score=85.78 Aligned_cols=241 Identities=8% Similarity=-0.001 Sum_probs=128.2
Q ss_pred CCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CC-----CcEEEEE
Q psy14815 90 QRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-----KSVWVWE 162 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-----g~i~vwd 162 (479)
.....++++..++++++.|+. ++.+.+||..++++.....+..... -.++...++++.++.|+ .+ ..+.+||
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 334445677889999999984 4589999999988765544432222 23455667899999988 34 4689999
Q ss_pred eCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCC---------cEEEEecCCcccceEeeeeecC------CC
Q psy14815 163 VGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDD---------TVKLFKEDKAEADWINFATLKS------HT 225 (479)
Q Consensus 163 ~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~------~~ 225 (479)
..+.. +..+... ......-....+..++..++.|+.+| .+..||..+... +........ ..
T Consensus 321 ~~t~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 321 PSSKT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp TTTTE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCC
T ss_pred CCCCc-ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCC
Confidence 98752 2221100 00000000011223455556665544 467788775441 111111110 01
Q ss_pred ccEEEEEEcc-CCCEEEEeeCCC-----------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 226 STVWSLAFDR-IGSRLATCSDDA-----------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 226 ~~v~~~~~~~-~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
..-.++.|.. +++.++.|+.++ .|.+||.... .|..+..-.......-.+....|
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-------------~W~~~~~~~mp~~R~~~~~~~l~ 465 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-------------PNTVFASNGLYFARTFHTSVVLP 465 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-------------CEEEECTTCCSSCCBSCEEEECT
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-------------CeeEEccCCCCCCcccCCeEECC
Confidence 1223455543 567777777532 5666665321 23222100111122233456678
Q ss_pred CCCeEEEEeCC-----------CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 294 LTDLIATACGD-----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 294 ~~~~l~~~~~d-----------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++++++.|+.+ ..+.+||..+.+ +..+.... .....-.+..+.|+++.+..++
T Consensus 466 ~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~-------W~~~~~~~-~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 466 DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT-------FYKQNPNS-IVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE-------EEECCCCS-SCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCEEEECCcccCcCcCCCCcccceEEEcCCCCc-------eeecCCCC-CccccccHhhcCCCcEEEecCC
Confidence 99999998864 468899987654 22222111 1111223455678998886654
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.58 E-value=0.00035 Score=72.57 Aligned_cols=308 Identities=8% Similarity=-0.021 Sum_probs=175.7
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC------C----------CccceEEEeecCCcEEEecCCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG------L----------PVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
...|.++...++|.+.+ |+.+ -|.+||..++........ . .....+..+..++.+..++...
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~ 339 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR 339 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc
Confidence 35699999998887555 4444 488898765543211100 0 0122333444456677776542
Q ss_pred CCCceeeeEEe---ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe------CCCCcEEEEEEcCC
Q psy14815 75 FGNKFTAKAIL---SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE------GHENEVKSVTWSKN 145 (479)
Q Consensus 75 ~~~~~~~~~~~---~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~l~~~~~ 145 (479)
.. ....... ..-....|.++...++|. |..|+.++-|..||..+++......-. -....|.++...++
T Consensus 340 ~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 340 NR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GS--SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred cc--ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 11 1111000 011245799999988775 555777778999998887543221100 12357899999888
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-- 221 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-- 221 (479)
++.|..|+.++-+..||..+++. ...... ......|.++...+++++.+ |+. +-+..||..++.. ......
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~--~~~~~~~~ 491 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSF--TTIEKEKD 491 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEE--EECCBCTT
T ss_pred CCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeE--EEcccccc
Confidence 87677788877899999877532 111100 01235688999888887554 444 4588899876432 111111
Q ss_pred --cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 222 --KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 222 --~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
......|.++...++|...+ |+. +.|..||...... .+... ....+-....|.++...++|.+.+
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~---------~~~~~l~~~~i~~i~~d~~g~lWi 558 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASI---------LPVSNVTKLFTNCIYEASNGIIWV 558 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCC---------SCSCGGGGSCEEEEEECTTSCEEE
T ss_pred ccccCCceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecC---------CCCCCCCCCeeEEEEECCCCCEEE
Confidence 11236789999998887655 444 4588888643211 00000 000011245789999999888666
Q ss_pred EEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+.. . .+..||..+++ +........-....|.++...++|...
T Consensus 559 gT~-~-Gl~~~d~~~~~-------~~~~~~~~gl~~~~i~~i~~d~~g~lW 600 (795)
T 4a2l_A 559 GTR-E-GFYCFNEKDKQ-------IKRYNTTNGLPNNVVYGILEDSFGRLW 600 (795)
T ss_dssp EES-S-CEEEEETTTTE-------EEEECGGGTCSCSCEEEEEECTTSCEE
T ss_pred EeC-C-CceeECCCCCc-------EEEeCCCCCCchhheEEEEECCCCCEE
Confidence 543 3 67788876653 111111111113457788888877654
No 258
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.58 E-value=0.0002 Score=62.43 Aligned_cols=209 Identities=11% Similarity=0.116 Sum_probs=128.7
Q ss_pred ccccCCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+-...+..++|+|++..|+ +...++.|...|.. ++......+.+. .....+++.+++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 345667899999999766554 56778899999998 653333333332 567899999888766666567889999987
Q ss_pred CCCceeeeeeee------ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc--ccceEeeee----ecCCCccEEEEE
Q psy14815 165 EEDEYECAAVIN------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA--EADWINFAT----LKSHTSTVWSLA 232 (479)
Q Consensus 165 ~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~----~~~~~~~v~~~~ 232 (479)
............ ........++|+|.++.|.++.+.....+|.++.. ......... -..+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 654322122221 22345689999999887887777666666665411 000111100 011234568899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-cc-----cccEEEEEecCCCCeEEEEeCCC
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HH-----GRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
++|....++. ...+..|.++|.... ......+.. .+ -.....|+|.++|.+.++ |+-+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~--------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE--------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC--------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC--------------EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 9997666554 445667888885311 111222221 11 125688999999985554 6766
Q ss_pred eEEEcc
Q psy14815 306 AIRIFK 311 (479)
Q Consensus 306 ~i~vw~ 311 (479)
.++.+.
T Consensus 245 ~~y~f~ 250 (255)
T 3qqz_A 245 RFYRFT 250 (255)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 666664
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.58 E-value=9e-05 Score=64.55 Aligned_cols=208 Identities=11% Similarity=0.113 Sum_probs=129.3
Q ss_pred ccccccccceEEEEECCCCCeEEE-eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISS-CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+.|-.+.+..++|+|++..|++ ...++.|...|.. ++.+..+.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~--------------------------------- 65 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP--------------------------------- 65 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE---------------------------------
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe---------------------------------
Confidence 345566678999999998765554 5677788888775 44433321
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEe------CCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLE------GHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
.+-......+++.+++.++++.-.++.+.++++..... ....... ..+.....++|+|+++.|+++....
T Consensus 66 ---l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 66 ---LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp ---CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred ---cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 11124577788888887666655677888888765431 1112221 1344578999999998888887776
Q ss_pred cEEEEEeCCCCceeeeeeee-------ccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecC-C---
Q psy14815 157 SVWVWEVGEEDEYECAAVIN-------AHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS-H--- 224 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~--- 224 (479)
...+|.++.......+..+. .+...+.+++++|. +++++....++.+..+|..... .....+.. .
T Consensus 143 p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~---~~~~~L~~g~~~l 219 (255)
T 3qqz_A 143 PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEV---IGEMSLTKGSRGL 219 (255)
T ss_dssp SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCE---EEEEECSTTGGGC
T ss_pred CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCE---EEEEEcCCccCCc
Confidence 66777765211001111111 12335789999995 4566666677888999977432 22333332 1
Q ss_pred ---CccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 225 ---TSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 225 ---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
-.+.-.|+|.++|+..+ .++-+.++.+.
T Consensus 220 ~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 220 SHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT 250 (255)
T ss_dssp SSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred ccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence 13668999999998544 46666555554
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.57 E-value=4.3e-05 Score=75.73 Aligned_cols=185 Identities=7% Similarity=0.006 Sum_probs=105.2
Q ss_pred CCeEEEeeC-CCcEEEEec-ccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 23 GTMISSCGE-DKNIRLWVM-VIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 23 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+..++.++. ++.|.-+|. .+|+.+-++.... .+..++....++.+..+|..+....+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 345666666 788999998 8888765543211 1334555667788888888765544443
Q ss_pred eEEeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCCCCc-----------------
Q psy14815 82 KAILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGHENE----------------- 136 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~----------------- 136 (479)
..... .....+. -+| .+..++.++. ++.|..+|.++++. +..+......
T Consensus 142 ~~~~~-~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 142 EVCDP-KVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL--KWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp ECCCG-GGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE--EEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred cCCCC-Cccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE--EEEEccCCCccccccCccccccccccc
Confidence 32110 0000111 111 1345666654 78999999999973 3333321110
Q ss_pred --------------------E-EEEEEcCCCCEEEEEeCC----------------CcEEEEEeCCCCceeeeeeeecc-
Q psy14815 137 --------------------V-KSVTWSKNGQFLATCSRD----------------KSVWVWEVGEEDEYECAAVINAH- 178 (479)
Q Consensus 137 --------------------v-~~l~~~~~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~- 178 (479)
+ ..+++.++...++.++.+ +.|..+|.++++..-..+ ...|
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~-~~~~d 294 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ-KTPHD 294 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE-SSTTC
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec-CCCCc
Confidence 0 135566666677766542 258999998875322211 1112
Q ss_pred -------ccceeEEEEecCCC---EEEEEEcCCcEEEEecCCcccce
Q psy14815 179 -------IQDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 179 -------~~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
..++. +...++|+ .++.++.+|.+.++|..+++..+
T Consensus 295 ~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 295 EWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp SSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 12221 22224673 57788899999999999887543
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.54 E-value=3.3e-05 Score=70.79 Aligned_cols=202 Identities=7% Similarity=-0.055 Sum_probs=121.9
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-----------------CCCcEEEEEEcCCCCEEEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-----------------HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~~~~~l~~~~ 153 (479)
....+++|.+++++++++..++.|..||..+++......... ....+..+++.++...|+++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456778899999878888889999999988765332211000 013578999997333466665
Q ss_pred CCCcEEEEEeCCCCceeeeee-eec-cccceeEEEEec-CCCEEEEEEc-----------------CCcEEEEecCCccc
Q psy14815 154 RDKSVWVWEVGEEDEYECAAV-INA-HIQDVKKVRFHP-FDNILASASY-----------------DDTVKLFKEDKAEA 213 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~v~~l~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~~~~ 213 (479)
..+.+..+|..++.. ..+.. ... .......+++.+ +|++.++-.. ++.|..||..++..
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 556688888664321 11111 111 112467899999 8987666432 36788888765442
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
. ... ........++++++++.|+.+ +..+.|.+|++..... ...+.... . .. ...+++.
T Consensus 178 ~--~~~---~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~----------~~~~~~~~---~-~g-P~gi~~d 237 (322)
T 2fp8_A 178 T--LLL---KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK----------GTAEVLVK---I-PN-PGNIKRN 237 (322)
T ss_dssp E--EEE---EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT----------TCEEEEEE---C-SS-EEEEEEC
T ss_pred E--Eec---cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC----------CccceEEe---C-CC-CCCeEEC
Confidence 1 111 111234568999999876655 5568899999753211 11122221 1 22 6789999
Q ss_pred CCCCeEEEEeC----------CCeEEEcccC
Q psy14815 293 HLTDLIATACG----------DDAIRIFKEN 313 (479)
Q Consensus 293 ~~~~~l~~~~~----------dg~i~vw~~~ 313 (479)
++|.++++... .+.|..++..
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 99987766544 3556666653
No 262
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=2e-05 Score=79.85 Aligned_cols=230 Identities=9% Similarity=0.084 Sum_probs=138.6
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.|+.|..+|..+|+.+.++... + .+..++.... ++.+..+|.++....+....
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 457788888999999999999887655431 1 1223333332 47788888876555444332
Q ss_pred Eecc--------------------------ccCCcEEEEEECCCCCEEEEEECCC-------------------eEEEEE
Q psy14815 84 ILSD--------------------------GHQRTIRETAWSPCGNFIASASFDA-------------------TTAVWD 118 (479)
Q Consensus 84 ~~~~--------------------------~~~~~v~~v~~~~~~~~l~t~~~dg-------------------~i~iwd 118 (479)
.... +.......+++.|+...++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1000 0111123467888888888887766 499999
Q ss_pred CCCCeEEEeEEEeCCC-------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeee--------ee-ccc
Q psy14815 119 KRSGQFECNATLEGHE-------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAV--------IN-AHI 179 (479)
Q Consensus 119 ~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~--------~~-~~~ 179 (479)
..+|+..-......|. .+.....+..+|+ .++.++.+|.+.++|..+++....... +. ...
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999844333332232 2233333333665 688999999999999988854311100 00 000
Q ss_pred cc------------------------eeEEEEecCCCEEEEEE------------------------------------c
Q psy14815 180 QD------------------------VKKVRFHPFDNILASAS------------------------------------Y 199 (479)
Q Consensus 180 ~~------------------------v~~l~~~~~~~~l~~~~------------------------------------~ 199 (479)
.+ -..++++|+..++.... .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 00 01267788766655421 2
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
+|.|..||..+++..|+.... .......+...+..++.++.|+.++.||.+.+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-----THWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEeCCCCcEEEEccCC-----CCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 378999999988865543221 12222234445788999999999999998554
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.53 E-value=0.00014 Score=65.95 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=136.2
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~ 168 (479)
.....++|+++++++++-..++.|..||..... . ..+. ....+..+++.++++++++..... .|..+|..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~--~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q--IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E--EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E--EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 567889999999877776678999999987642 2 2222 235688999999998655543332 366667666532
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeee------eecCCCccEEEEEEccCCCEEEE
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
..+.... .......++..+++..+++-..++.|..+|...+........ .....-.....+ +++++.|+.
T Consensus 108 -~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 -ETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp -EEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred -EEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 2222211 112234455555555455444688899998765321000000 001111234555 788876655
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
+ ...+.|..+++...... ........+ .....++++++|.++++....+.|.+++.. ++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~---------~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~----- 243 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKP---------GEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS----- 243 (306)
T ss_dssp EETTTTEEEEEEBCTTSCB---------CCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC-----
T ss_pred EeCCCCEEEEEEeCCCCCC---------CccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC-----
Confidence 4 45678999998542111 001111111 235668999999888777778899999875 33
Q ss_pred eeeEEEeccccccccceeEEEec---CCCCCCCccc
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWN---PVVPEPQKTN 354 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~s---p~~~~l~~~~ 354 (479)
...+... ......+++++|. |++..|....
T Consensus 244 --~~~~~~~-~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 244 --TTIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp --EEEEECG-GGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred --EEEEeec-ccccCCceEEEEecccCCCCEEEEEC
Confidence 0011122 1223568899999 8988775543
No 264
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.52 E-value=4.3e-05 Score=66.23 Aligned_cols=186 Identities=12% Similarity=-0.001 Sum_probs=115.6
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ . .. .-.-
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-----------------------------------~~-~~Fg 98 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-----------------------------------LG-NIFA 98 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-----------------------------------CT-TCCE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-----------------------------------CC-Ccce
Confidence 4678887 3567777788889999999998876543 1 00 0011
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
..+++.. ++..+....++.+.+||..+.+. +.++.... .-..++ ++++.|+.+..++.|.++|..+.+....+.
T Consensus 99 eGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~--~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 99 EGLASDG-ERLYQLTWTEGLLFTWSGMPPQR--ERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EEEEECS-SCEEEEESSSCEEEEEETTTTEE--EEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred eEEEEeC-CEEEEEEccCCEEEEEECCcCcE--EEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 2233432 23444455688999999999974 44444322 223444 467888888778999999998875443333
Q ss_pred eeecccc---ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee-eee--------cCCCccEEEEEEccCCCEEE
Q psy14815 174 VINAHIQ---DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF-ATL--------KSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 174 ~~~~~~~---~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~--------~~~~~~v~~~~~~~~~~~l~ 241 (479)
.-. +.. .++.+.|. +|+..+....+..|.+.|..+++.....- ..+ ..-....+.|+|+|+++.|+
T Consensus 173 V~~-~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 173 VKL-RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp CEE-TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred eCC-CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 222 222 34667777 67655544467899999999877421111 101 11224678999999877766
Q ss_pred EeeC
Q psy14815 242 TCSD 245 (479)
Q Consensus 242 s~~~ 245 (479)
..+.
T Consensus 251 VTGK 254 (268)
T 3nok_A 251 MTGK 254 (268)
T ss_dssp EEET
T ss_pred EeCC
Confidence 6553
No 265
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.47 E-value=4.6e-05 Score=65.42 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=117.9
Q ss_pred cccccccc--ceEEEEECCCCCeEEEeeCC--CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 5 QTLKGHQG--RVWNVSWNPQGTMISSCGED--KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 5 ~~l~~h~~--~V~~l~~s~~~~~l~t~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+++ .|.. -...+.|++ +.++.+.+.+ ..|+.+|+.+++.+..+...
T Consensus 13 ~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~---------------------------- 62 (243)
T 3mbr_X 13 KRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP---------------------------- 62 (243)
T ss_dssp EEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----------------------------
T ss_pred EEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----------------------------
Confidence 444 4553 356899986 5666666665 48999999998876654210
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+ -.--.+++. .++.......++.+.+||..+.+. +.++..... -..++ +++..|+++..++.|.+
T Consensus 63 -------~~-~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~--~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~ 128 (243)
T 3mbr_X 63 -------PP-YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP--RARFRYPGE-GWALT--SDDSHLYMSDGTAVIRK 128 (243)
T ss_dssp -------TT-CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE--EEEEECSSC-CCEEE--ECSSCEEEECSSSEEEE
T ss_pred -------CC-cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE--EEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEE
Confidence 00 011122232 233344445678999999999874 444443222 23444 46777777777889999
Q ss_pred EEeCCCCceeeeeeeeccc---cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeeec--------CCCccE
Q psy14815 161 WEVGEEDEYECAAVINAHI---QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATLK--------SHTSTV 228 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~--------~~~~~v 228 (479)
+|..+.+....+..- .+. ..++.+.+. +|+..+..-.+..|.+.|..+++..... +..+. .-....
T Consensus 129 iDp~t~~~~~~I~V~-~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vl 206 (243)
T 3mbr_X 129 LDPDTLQQVGSIKVT-AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVL 206 (243)
T ss_dssp ECTTTCCEEEEEECE-ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCE
T ss_pred EeCCCCeEEEEEEEc-cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCce
Confidence 999887543333322 122 234566766 5665554446778999999987742111 11111 122467
Q ss_pred EEEEEccCCCEEEEeeC
Q psy14815 229 WSLAFDRIGSRLATCSD 245 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~ 245 (479)
+.++++|+++.|+..+.
T Consensus 207 NGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 207 NGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEEcCCCCEEEEECC
Confidence 89999998887776664
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.44 E-value=6.5e-05 Score=65.09 Aligned_cols=182 Identities=10% Similarity=0.019 Sum_probs=113.7
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~ 169 (479)
.....+.|+ ++.+..+.+.+|.|+++|+++++..... +... ..-..+++. ++.|+. .-.++.+.+||..+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl--- 126 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASD--GERLYQLTWTEGLLFTWSGMPP--- 126 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEEC--SSCEEEEESSSCEEEEEETTTT---
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEe--CCEEEEEEccCCEEEEEECCcC---
Confidence 445788887 4567777788899999999999854433 4432 122335554 444444 446889999999988
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CC---ccEEEEEEccCCCEEEEee
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HT---STVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~ 244 (479)
+.+..+..... -..++ ++++.|+.+..++.|.++|..+.+. ...+.- +. ..++.+.|. +|+..+..-
T Consensus 127 ~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v----~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw 198 (268)
T 3nok_A 127 QRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL----VGAVQVKLRGQPVELINELECA-NGVIYANIW 198 (268)
T ss_dssp EEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE----EEEEEeCCCCcccccccccEEe-CCEEEEEEC
Confidence 44444443222 23444 4577777777789999999987664 222221 22 244667776 665444444
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCeEEEEeC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.+..|.+.|..++ +.+..+... .....+.|+|+|+++.|++.+.
T Consensus 199 ~s~~I~vIDp~TG---------------~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 199 HSSDVLEIDPATG---------------TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCSEEEEECTTTC---------------BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCeEEEEeCCCC---------------cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6778999997544 334444321 1346789999998776666553
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.42 E-value=0.00041 Score=59.52 Aligned_cols=184 Identities=11% Similarity=0.030 Sum_probs=112.6
Q ss_pred CCcEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~ 166 (479)
......+.|++ +.+..+.+.+ +.|+.+|+.+++......+..+. .-..+++. ++.|+.. -.++.+.+||..+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAW--RDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEESSSSEEEEEETTTT
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEe--CCEEEEEEeeCCEEEEEECCcC
Confidence 45567899986 5556666664 49999999999854444443322 11234443 4445444 45889999999987
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CC---ccEEEEEEccCCCEEE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HT---STVWSLAFDRIGSRLA 241 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~ 241 (479)
+.+..+..... -..++ +++..|+.+..++.|.++|..+.+. ...+.- +. ..++.+.+. +|+.++
T Consensus 96 ---~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~----~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 96 ---TPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ----VGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp ---EEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred ---cEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeE----EEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 44444443222 23444 5677777777788999999987654 222221 11 244566665 555444
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCeEEEEeC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
..-.+..|.+.|..++ +.+..+... .....+.|+++|+++.|++.+.
T Consensus 165 nvw~s~~I~vIDp~tG---------------~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPASG---------------KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTTC---------------BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEECCCC---------------CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4445778999987554 333333311 2346789999998777766664
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.41 E-value=4.2e-05 Score=75.81 Aligned_cols=229 Identities=14% Similarity=0.087 Sum_probs=132.3
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.|+.+..+|..+|+.+.+.... + .+..++.... ++.+..+|.++....+....
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 557777888999999999998876543321 1 1234444443 67888898886554444332
Q ss_pred Eecc---------------------------------ccCCcEEEEEECCCCCEEEEEECC----------------CeE
Q psy14815 84 ILSD---------------------------------GHQRTIRETAWSPCGNFIASASFD----------------ATT 114 (479)
Q Consensus 84 ~~~~---------------------------------~~~~~v~~v~~~~~~~~l~t~~~d----------------g~i 114 (479)
.... +.......+++.++...++.+..+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 1100 000001234566666677666532 369
Q ss_pred EEEECCCCeEEEeEEEeCCC--------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeeeee-------
Q psy14815 115 AVWDKRSGQFECNATLEGHE--------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAVIN------- 176 (479)
Q Consensus 115 ~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------- 176 (479)
..+|..+++..-......|. .++. +....+|+ .++.++.+|.+.++|..+++.......-.
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 99999999844333332221 2221 22224674 57788899999999998875322111000
Q ss_pred ---ccccce--------------------------eEEEEecCCCEEEEEE-----------------------------
Q psy14815 177 ---AHIQDV--------------------------KKVRFHPFDNILASAS----------------------------- 198 (479)
Q Consensus 177 ---~~~~~v--------------------------~~l~~~~~~~~l~~~~----------------------------- 198 (479)
....++ ..++|+|+..++++..
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 000111 2467888777776654
Q ss_pred --------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 199 --------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 199 --------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
.+|.|..||..+++..|..... ..+....+...+..++.++.||.|+.+|.+++
T Consensus 434 ~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-----FAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CTTSTTSCCCEEEEEECTTTCCEEEEEEES-----SCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CccccCCCCCCeEEEEECCCCCEEEEecCC-----CCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 2478999999888765443221 11111222334667888999999999998554
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.37 E-value=0.00021 Score=70.93 Aligned_cols=186 Identities=6% Similarity=-0.081 Sum_probs=105.4
Q ss_pred CCeEEEeeC-CCcEEEEec-ccccccccccCCC---------------------ccce----EEEeecCCcEEEecCCCC
Q psy14815 23 GTMISSCGE-DKNIRLWVM-VIREPYEKLHGLP---------------------VETS----LRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 23 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~---------------------~~~~----~~~~~~~~~i~~w~~~~~ 75 (479)
+..++.++. ++.|.-+|. .+|+.+-++.... .+.. ++....++.+..+|..+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 445666666 788988998 8887764443211 1223 555666788888887765
Q ss_pred CCceeeeEEeccccCCcEEE-EEECCCCCEEEEEE------CCCeEEEEECCCCeEEEeEEEeCCCCc------------
Q psy14815 76 GNKFTAKAILSDGHQRTIRE-TAWSPCGNFIASAS------FDATTAVWDKRSGQFECNATLEGHENE------------ 136 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~------------ 136 (479)
...+....... .....+.+ ..+. ++ .+++++ .+|.|+-+|.++|+. +..+......
T Consensus 142 ~~~W~~~~~~~-~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~--~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 142 ETVWKVENSDI-KVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQ--VWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp CEEEEEECCCG-GGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCE--EEEEESSSCHHHHTBCTTTTTT
T ss_pred CEEEeecCCCC-CccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcE--EEEEcCCCCccccccccccccc
Confidence 44444321110 00001110 0011 33 555554 379999999999973 3333322110
Q ss_pred -------------------------E-EEEEEcCCCCEEEEEeCCC----------------cEEEEEeCCCCceeeeee
Q psy14815 137 -------------------------V-KSVTWSKNGQFLATCSRDK----------------SVWVWEVGEEDEYECAAV 174 (479)
Q Consensus 137 -------------------------v-~~l~~~~~~~~l~~~~~dg----------------~i~vwd~~~~~~~~~~~~ 174 (479)
+ ..+++.++...++.++.++ .|..+|.++++..-.. .
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~-q 295 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY-Q 295 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE-E
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe-e
Confidence 0 1345666777788777653 7899999988532221 2
Q ss_pred eeccc--------cceeEEEEe-cCC---CEEEEEEcCCcEEEEecCCcccce
Q psy14815 175 INAHI--------QDVKKVRFH-PFD---NILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 175 ~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
...|. .++. +... .+| +.++.++.+|.+.++|.++++..+
T Consensus 296 ~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 296 KTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp SSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 22221 1121 2222 456 567778899999999999887644
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.0025 Score=65.92 Aligned_cols=307 Identities=10% Similarity=-0.034 Sum_probs=168.6
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC------C----------CccceEEEeecCCcEEEecCCCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG------L----------PVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
..|.++...++|.+.+.. .+ -+.+||..+++...-... . .....+..+...+.+.+++....
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCC
Confidence 568999998888766543 44 588898765443211100 0 01222333344366777766532
Q ss_pred CCceeee----E--E---eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE-------eCCCCcEEE
Q psy14815 76 GNKFTAK----A--I---LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-------EGHENEVKS 139 (479)
Q Consensus 76 ~~~~~~~----~--~---~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~v~~ 139 (479)
....... . . ...-....|.++...++|. |..|+.++-|..++..++........ .-....|.+
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 367 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS 367 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence 1110000 0 0 0012346799999988775 66677777899999877653322110 012356899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee-eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 140 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
+...+++. |..|+.++-+..||..+... .... ........|.++...++++ |..|+.++-+..+|..++.. ...
T Consensus 368 i~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~--~~~ 442 (781)
T 3v9f_A 368 VCDDGQGK-LWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF--QII 442 (781)
T ss_dssp EEECTTSC-EEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEE--EEC
T ss_pred EEEcCCCC-EEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE--EEe
Confidence 98887776 66677667788898765311 1110 0012235688888887776 44577767788998875442 111
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe--ccccccEEEEEecCCCC
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTD 296 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~ 296 (479)
.........|.++...+++. |..|+. +.|..||....... ...... ......|.++...++|.
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~-------------~~~~~~~~~~~~~~i~~i~~d~~g~ 507 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI-------------HHYDTSNSQLLENFVRSIAQDSEGR 507 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC-------------EEECTTTSSCSCSCEEEEEECTTCC
T ss_pred ccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE-------------ecccCcccccccceeEEEEEcCCCC
Confidence 10012346789999888776 444555 45888886443211 011000 00135788999998887
Q ss_pred eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 297 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
+.+.. .++-+..|+..+++ +........-....|.++...++|..
T Consensus 508 lWigt-~~~Gl~~~~~~~~~-------~~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 508 FWIGT-FGGGVGIYTPDMQL-------VRKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp EEEEE-SSSCEEEECTTCCE-------EEEECTTTTCSCSCEEEEEECTTSCE
T ss_pred EEEEE-cCCCEEEEeCCCCe-------EEEccCCCCCCCCeeEEEEECCCCCE
Confidence 66644 43446778776553 11111111112345677777777653
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.00014 Score=69.42 Aligned_cols=117 Identities=11% Similarity=0.136 Sum_probs=71.0
Q ss_pred CCcEEEEEECCCCCEEEEEECC-C----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFD-A----TTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
......++|++++++|+.+... + .+.+.+. .+.......+.. ......++++| ++.++++-..++.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 4567899999999966666542 1 3444443 332211122221 23456788999 6666666556788999998
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDK 210 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~ 210 (479)
..... ..+.... .....+.++|+|++++|. +-...+.|..++...
T Consensus 256 ~~~~~-~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQET-TPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTEE-EEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCcE-EEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 76521 1111111 123467899999999554 445678899988764
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.36 E-value=0.00027 Score=70.12 Aligned_cols=229 Identities=11% Similarity=0.052 Sum_probs=130.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccc------eEEEee------cCCcEEEecCCCCCC
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VET------SLRQLV------EDKNIRLWGKESFGN 77 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~------~~~~~~------~~~~i~~w~~~~~~~ 77 (479)
+..++.++.|+.|.-+|..+|+.+-+.... + ... .++... .++.+..+|..+...
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 456777888999999999988876543321 1 112 333333 267788888876555
Q ss_pred ceeeeEEe--c-------------c---------------------ccCCcEEEEEECCCCCEEEEEEC-----------
Q psy14815 78 KFTAKAIL--S-------------D---------------------GHQRTIRETAWSPCGNFIASASF----------- 110 (479)
Q Consensus 78 ~~~~~~~~--~-------------~---------------------~~~~~v~~v~~~~~~~~l~t~~~----------- 110 (479)
.+...... . . +....-..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 55322100 0 0 00000123556677777777663
Q ss_pred ---------C----CeEEEEECCCCeEEEeEEEeCCC--------CcEEEEEEc-CCCC---EEEEEeCCCcEEEEEeCC
Q psy14815 111 ---------D----ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNGQ---FLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 111 ---------d----g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~-~~~~---~l~~~~~dg~i~vwd~~~ 165 (479)
| +.|..+|..+|+..-......|. .++. +... .+|+ .++.++.+|.+.++|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999844333333332 1221 2222 4664 788899999999999988
Q ss_pred CCceeeeeeee------c----cccc--------------------------------eeEEEEecCCCEEEEEE-----
Q psy14815 166 EDEYECAAVIN------A----HIQD--------------------------------VKKVRFHPFDNILASAS----- 198 (479)
Q Consensus 166 ~~~~~~~~~~~------~----~~~~--------------------------------v~~l~~~~~~~~l~~~~----- 198 (479)
++..-....-. . ...+ -..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 75322111000 0 0000 01356677655555432
Q ss_pred ----------------------------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 199 ----------------------------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 199 ----------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
.+|.|..||+.+++..|+.........+. ....+..++.++.|+.++
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-----~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGV-----LATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCC-----EEETTTEEEEECTTSEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccc-----eEeCCCEEEEECCCCcEE
Confidence 25789999999888755543221111222 112367788899999999
Q ss_pred EEeccCC
Q psy14815 251 IWKEYKP 257 (479)
Q Consensus 251 iwd~~~~ 257 (479)
.||.+++
T Consensus 511 A~D~~tG 517 (582)
T 1flg_A 511 AFDAKSG 517 (582)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998554
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.0014 Score=60.55 Aligned_cols=201 Identities=9% Similarity=0.004 Sum_probs=121.1
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~ 167 (479)
...+..++|++.+..|+.+ ...+.|..+++..+... ............+++.+.+..|+ +-...+.|.+.++....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce--EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 3457899999866565554 45689999998876422 22222223457889987555554 44456789999987653
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEE-cC-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASAS-YD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
. .............++++|.+..|.... .. +.|..++++.... .......-.....++++|++..|+.+.
T Consensus 150 ~---~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~----~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 150 R---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR----RIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp C---EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred e---EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc----EEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 1 112222234568999999655555444 44 7788888875432 111122334578999998777666554
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|..+|+..... . ..+... ......+++ ..+.++++-...+.|..++..+++
T Consensus 223 ~~~~I~~~~~dG~~~-------------~--~~~~~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 223 KHHVIERANLDGSHR-------------K--AVISQG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TTTEEEEEETTSCSC-------------E--EEECSS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEeCCCCce-------------E--EEEeCC-CCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 557788888743211 1 111111 334567777 345555665667888888755544
No 274
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.34 E-value=0.00084 Score=66.60 Aligned_cols=186 Identities=8% Similarity=-0.077 Sum_probs=103.7
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCC-----------------ccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLP-----------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+.......
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~ 148 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADH 148 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCG
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCC
Confidence 345555553448888988888765543321 134455666788888888876555544332110
Q ss_pred c----ccCCcEEEEEECCCCC-EEEEEE------CCCeEEEEECCCCeEEEeEEEeCCCCcE------------------
Q psy14815 87 D----GHQRTIRETAWSPCGN-FIASAS------FDATTAVWDKRSGQFECNATLEGHENEV------------------ 137 (479)
Q Consensus 87 ~----~~~~~v~~v~~~~~~~-~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~v------------------ 137 (479)
. ....++. ..=..+++ .+++++ .++.|.-+|..+|+..- ........+
T Consensus 149 ~~~~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W--~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 149 GAGYTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW--MRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp GGTCBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE--EEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CcCcccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe--ecCCCccccccccCccccccccccccc
Confidence 0 0011111 00001233 566654 37899999999997432 222110000
Q ss_pred -----------------------EEEEEcCCCCEEEEEeC--------------------C----CcEEEEEeCCCCcee
Q psy14815 138 -----------------------KSVTWSKNGQFLATCSR--------------------D----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 138 -----------------------~~l~~~~~~~~l~~~~~--------------------d----g~i~vwd~~~~~~~~ 170 (479)
..+++.|+...++.++. | +.|..+|.++++..-
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 13456666677777663 2 579999998885322
Q ss_pred eeeeeeccc--------cceeEEEEe-cCC---CEEEEEEcCCcEEEEecCCcccc
Q psy14815 171 CAAVINAHI--------QDVKKVRFH-PFD---NILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 171 ~~~~~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
.. ....|. .++. +... .+| ..++.++.+|.++++|.++++..
T Consensus 306 ~~-q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 306 FY-QHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp EE-ESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EE-eCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 21 122221 1211 1221 456 37888999999999999988753
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.32 E-value=0.00028 Score=67.25 Aligned_cols=243 Identities=12% Similarity=0.102 Sum_probs=131.6
Q ss_pred cceEEEEECCC--CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 12 GRVWNVSWNPQ--GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 12 ~~V~~l~~s~~--~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.....|+|+|+ +..|+.+...+.|+.+|..++..... ...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~--------------------------------------~~~ 180 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK--------------------------------------TTN 180 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE--------------------------------------CCC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe--------------------------------------ecC
Confidence 34567888884 33444444337788887654443211 113
Q ss_pred CCcEEEEEECCCCCEEEEEECCC----e-EEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDA----T-TAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg----~-i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
......++++++++ |+.+...+ . +...+...+. .....+. .-.....++++| ++.+.++-..++.|+.+|.
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~-~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF-TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT-CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe-ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 35678999999999 44444321 2 3333322221 1011121 123456788999 6665555556788999988
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccce---Eeeeee---c---------CCCcc
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADW---INFATL---K---------SHTST 227 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~---~~~~~~---~---------~~~~~ 227 (479)
.++.....+..... ...-..++|+|+++.|..+ ...+.|+.++........ ..+... . ..-..
T Consensus 258 ~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 336 (433)
T 4hw6_A 258 ATGTLTEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWG 336 (433)
T ss_dssp TTCCEEEEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSS
T ss_pred CCCeEEEEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcC
Confidence 75532111111111 1223469999999855544 456789998865321100 011100 0 01123
Q ss_pred EEEEEE---------ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------------
Q psy14815 228 VWSLAF---------DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----------------- 281 (479)
Q Consensus 228 v~~~~~---------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 281 (479)
...+++ .+++.++++-...+.|+.++.. + . +.++.+.
T Consensus 337 P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-~---------------v~t~~G~g~~~~~G~~dG~~~~~~ 399 (433)
T 4hw6_A 337 PNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-R---------------VTTYAGRGNSREWGYVDGELRSQA 399 (433)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-E---------------EEEEECCCTTCSSCCBCEETTTTC
T ss_pred CccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-C---------------EEEEEeCCCCCccccCCCcccccc
Confidence 567888 6677666666667788888731 1 1 1111111
Q ss_pred ccccEEEEEec-CCCCeEEEEeCCCeEEEcccC
Q psy14815 282 HGRTIYDISWC-HLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 282 ~~~~i~~l~~~-~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.-.....|+++ +++.++++-..++.|+.++++
T Consensus 400 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 400 LFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 01246788998 566666666667788877653
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.0026 Score=65.83 Aligned_cols=305 Identities=10% Similarity=0.005 Sum_probs=169.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc-------------CC----------CccceEEEeecCCcE
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH-------------GL----------PVETSLRQLVEDKNI 67 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~i 67 (479)
...|.++...++|.+. .|+..+-|.++|..++....... .. .....+-.+..++.+
T Consensus 257 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeE
Confidence 3569999998888644 45554558888876554221110 00 011233344445667
Q ss_pred EEecCCCCCCceeeeEE------eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-EeCCCCcEEEE
Q psy14815 68 RLWGKESFGNKFTAKAI------LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGHENEVKSV 140 (479)
Q Consensus 68 ~~w~~~~~~~~~~~~~~------~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l 140 (479)
..++..... ...... ...-....|.++...+++. |..|+.++-|..||..+++...... .......|.++
T Consensus 336 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 336 NFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp EEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred EEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 777665311 111100 0011346799999888775 5566666679999987654322110 01234678999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
...+++. |..|+.++-+..+|..+++. ............|.++...++++ |..|+. +-+..||..+.... ....
T Consensus 413 ~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~--~~~~ 486 (781)
T 3v9f_A 413 LKDSEGN-LWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI--HHYD 486 (781)
T ss_dssp EECTTSC-EEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC--EEEC
T ss_pred EECCCCC-EEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE--eccc
Confidence 8887776 55577767788888766421 11110011345688888888776 444555 56888998765431 1111
Q ss_pred ec---CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---ccccccEEEEEecCC
Q psy14815 221 LK---SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHL 294 (479)
Q Consensus 221 ~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~l~~~~~ 294 (479)
.. .....|.++...++|...+ |+.++-|..||.... + ...+. +-....|.++...++
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~---------------~-~~~~~~~~~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ---------------L-VRKFNQYEGFCSNTINQIYRSSK 549 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC---------------E-EEEECTTTTCSCSCEEEEEECTT
T ss_pred CcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC---------------e-EEEccCCCCCCCCeeEEEEECCC
Confidence 11 1146789999998887554 555344777875322 1 11221 112457899999888
Q ss_pred CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
|.+.++. .+|-+..||..+++ +........-....|.++...++|...
T Consensus 550 g~lWi~T-~~Glv~~~d~~~~~-------~~~~~~~~gl~~~~i~~i~~d~~g~lW 597 (781)
T 3v9f_A 550 GQMWLAT-GEGLVCFPSARNFD-------YQVFQRKEGLPNTHIRAISEDKNGNIW 597 (781)
T ss_dssp SCEEEEE-TTEEEEESCTTTCC-------CEEECGGGTCSCCCCCEEEECSSSCEE
T ss_pred CCEEEEE-CCCceEEECCCCCc-------EEEccccCCCCCceEEEEEECCCCCEE
Confidence 8866654 46655889887654 111111111112356777777777644
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.30 E-value=8.7e-05 Score=76.37 Aligned_cols=199 Identities=14% Similarity=0.153 Sum_probs=111.0
Q ss_pred cEEEEEEC-CCCCEEEEEEC-CC----eEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEE
Q psy14815 92 TIRETAWS-PCGNFIASASF-DA----TTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVW 159 (479)
Q Consensus 92 ~v~~v~~~-~~~~~l~t~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~ 159 (479)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.. ...+. .....+.|+||++.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 99998886643 22 5999999988 521 11111 113468899999888877665 2577
Q ss_pred EEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEc---CCcEEEEecCCcccceEeeeee-cCCCccEEEEEEc
Q psy14815 160 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 234 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 234 (479)
.+++.+..... ...+. ........+.|+|+|++|+..+. ...|.++|+.++..... +..+ ........++.|+
T Consensus 251 ~~~lgt~~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 251 RHVMGKLQSED-VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT-LEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEETTSCGGGC-EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC-EEESSCCCTTCCEEEEEE
T ss_pred EEECCCCchhc-EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce-eEEeecCCCCceEEEeee
Confidence 77876653211 11121 22234567899999998887663 34688889886532110 0222 2233445556554
Q ss_pred cCCCEEE-EeeCC--C--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 235 RIGSRLA-TCSDD--A--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 235 ~~~~~l~-s~~~d--g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
. ++.|+ ....+ + .|..+++..+.. +... .+.......+..+.+. .+.++++...++..++
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~------------~~~~-li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSD------------WSHV-LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTC------------CCCE-EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEE
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCccc------------ceee-EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEE
Confidence 4 55544 44333 3 555556532211 1110 0111112245556665 3446666777776555
Q ss_pred cc
Q psy14815 310 FK 311 (479)
Q Consensus 310 w~ 311 (479)
|-
T Consensus 394 ~~ 395 (751)
T 2xe4_A 394 WT 395 (751)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.29 E-value=0.0004 Score=68.85 Aligned_cols=236 Identities=14% Similarity=0.097 Sum_probs=134.5
Q ss_pred EEECCCCCe----EEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEee------cCCcEEEecCC
Q psy14815 17 VSWNPQGTM----ISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLV------EDKNIRLWGKE 73 (479)
Q Consensus 17 l~~s~~~~~----l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~------~~~~i~~w~~~ 73 (479)
++++|.+.. ++.++.|+.+.-+|..+|+.+-+.... + .+..++... .++.+..+|.+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 444443444 788888999999999988876543221 1 123333333 26788888888
Q ss_pred CCCCceeeeEEeccc-------------------------------c-CCcE-EEEEECCCCCEEEEEECC---------
Q psy14815 74 SFGNKFTAKAILSDG-------------------------------H-QRTI-RETAWSPCGNFIASASFD--------- 111 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~-------------------------------~-~~~v-~~v~~~~~~~~l~t~~~d--------- 111 (479)
+....+......... + ...+ ..+++.+...+++.+..+
T Consensus 191 TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r 270 (599)
T 1w6s_A 191 TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMR 270 (599)
T ss_dssp TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGS
T ss_pred CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCccc
Confidence 655444433211000 0 0001 134556667777777655
Q ss_pred -------CeEEEEECCCCeEEEeEEEeCCC--------CcEEEEEEc-CCC---CEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 112 -------ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNG---QFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 112 -------g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
+.|..+|.++|+..-......|. .++. +... .+| ..++.++.+|.+.++|.++++..-..
T Consensus 271 ~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 271 PGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp CSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 38999999999854333333332 1222 2222 467 46777889999999999887533221
Q ss_pred eeee----------ccccce--------------------------eEEEEecCCCEEEEEE------------------
Q psy14815 173 AVIN----------AHIQDV--------------------------KKVRFHPFDNILASAS------------------ 198 (479)
Q Consensus 173 ~~~~----------~~~~~v--------------------------~~l~~~~~~~~l~~~~------------------ 198 (479)
.... ....++ ..++|+|+..++++..
T Consensus 350 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~ 429 (599)
T 1w6s_A 350 KLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQ 429 (599)
T ss_dssp ESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCc
Confidence 1000 000111 2456777665554431
Q ss_pred ---------------------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 199 ---------------------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 199 ---------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
..|.+..||+.+++..|+.........+. ....+..++.++.|+.++.||.+++
T Consensus 430 ~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-----~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 430 FFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGT-----MATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBC-----EEETTTEEEEECTTSEEEEEETTTC
T ss_pred ceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcc-----eEecCCEEEEECCCCeEEEEECCCC
Confidence 34678888888887655443221111111 2224677888999999999998655
Q ss_pred C
Q psy14815 258 G 258 (479)
Q Consensus 258 ~ 258 (479)
+
T Consensus 505 ~ 505 (599)
T 1w6s_A 505 D 505 (599)
T ss_dssp C
T ss_pred C
Confidence 3
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.22 E-value=0.003 Score=57.43 Aligned_cols=204 Identities=7% Similarity=-0.024 Sum_probs=120.9
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCC---eEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSG---QFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVG 164 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~ 164 (479)
...+..++|++.+..|+.+ ...+.|..+++.+. . .....+...-.....+++.+.+..|+.+ ...+.|.++++.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~-~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc-ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 4567899999866555554 45689999998761 1 1112233222356789998755555544 567889999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC--CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... .............++++|.+..|+.+... +.|..+++..... ..+ ....-.....++++++++.|+.
T Consensus 108 g~~~---~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~--~~~--~~~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 108 GVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSL--VTENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp SSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EEE--ECSSCSCEEEEEEETTTTEEEE
T ss_pred CCce---EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe--EEE--EECCCCCceEEEEeccCCEEEE
Confidence 6421 11122223456899999966655555442 6788888764332 111 1122346789999998777765
Q ss_pred ee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+. ..+.|..+|+..... +.+..... .......+++. .+.++++-...+.|..++..+++
T Consensus 181 ~D~~~~~I~~~d~dg~~~-------------~~~~~~~~-~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNR-------------KTILEDEK-RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EETTTTEEEEEETTSCSC-------------EEEEECTT-TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCeEEEEecCCCce-------------EEEeecCC-ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 54 556899999742111 11211111 12345677774 35566666667889888876654
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.22 E-value=5.9e-05 Score=76.45 Aligned_cols=233 Identities=12% Similarity=0.031 Sum_probs=125.1
Q ss_pred EEEEECCCCCeEEEeeC-CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 15 WNVSWNPQGTMISSCGE-DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.++++..++++++.|+. ++.+.+||..+.+-... ... .....-
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~----------------------------------~~~--~~~R~~ 289 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG----------------------------------PDM--QVARGY 289 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC----------------------------------CCC--SSCCSS
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC----------------------------------CCC--Cccccc
Confidence 34667788888888873 45688887765432111 000 011112
Q ss_pred EEEEECCCCCEEEEEE-CC-----CeEEEEECCCCeEEEeE-----EEeCCCCcEEEEEEcCCCCEEEEEeCCC------
Q psy14815 94 RETAWSPCGNFIASAS-FD-----ATTAVWDKRSGQFECNA-----TLEGHENEVKSVTWSKNGQFLATCSRDK------ 156 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~-~d-----g~i~iwd~~~~~~~~~~-----~~~~~~~~v~~l~~~~~~~~l~~~~~dg------ 156 (479)
.+++..++++.++.|+ .+ ..+.+||..++++..+. .+..... ...+..++..++.|+.+|
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g~~~~~~ 366 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKGSVFQAG 366 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGGCEEECC
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc---cceeecCCceEEEECCCCcEEEec
Confidence 3345567888888888 34 57999999998765431 0110000 011223455555554443
Q ss_pred ---cEEEEEeCCCCceeeeeeeec------cccceeEEEEec-CCCEEEEEEcCC-----------cEEEEecCCcccce
Q psy14815 157 ---SVWVWEVGEEDEYECAAVINA------HIQDVKKVRFHP-FDNILASASYDD-----------TVKLFKEDKAEADW 215 (479)
Q Consensus 157 ---~i~vwd~~~~~~~~~~~~~~~------~~~~v~~l~~~~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~ 215 (479)
.+..||..+..-......... ....-.++.|.. +++++++|+.++ .|.+||..+.. |
T Consensus 367 ~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W 444 (656)
T 1k3i_A 367 PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP--N 444 (656)
T ss_dssp SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC--E
T ss_pred CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC--e
Confidence 567888877642222111111 011234455544 678888888543 57778776543 2
Q ss_pred Eeee--eecCCCccEEEEEEccCCCEEEEeeCC-----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc
Q psy14815 216 INFA--TLKSHTSTVWSLAFDRIGSRLATCSDD-----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 282 (479)
Q Consensus 216 ~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (479)
..+. .+. ....-.+++..|+++.++.|+.+ ..+.+||.... .|..+..+...
T Consensus 445 ~~~~~~~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-------------~W~~~~~~~~~- 509 (656)
T 1k3i_A 445 TVFASNGLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD-------------TFYKQNPNSIV- 509 (656)
T ss_dssp EEECTTCCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-------------EEEECCCCSSC-
T ss_pred eEEccCCCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC-------------ceeecCCCCCc-
Confidence 3222 111 11122345567889999998854 46788987432 23322222211
Q ss_pred cccEEEEEecCCCCeEEEEeC
Q psy14815 283 GRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~~~~~ 303 (479)
........+.|++++++.|+.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 112234456789999999885
No 281
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.20 E-value=0.0034 Score=57.33 Aligned_cols=272 Identities=9% Similarity=0.078 Sum_probs=139.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC---Cc---------cceEEEeecCCcEEEecCCCCCCc
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL---PV---------ETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
...+.+|.|.+++..+++ +.+|.| +.....++.-..+... +. ...+..+...+.+ +...+.+..
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i--~~S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIM--LHTTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEE--EEESSTTSS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeE--EEECCCCCC
Confidence 457999999887777774 456654 2222223221111110 00 1122233333322 223333444
Q ss_pred eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 79 ~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
+...... ..+...+..+.+.+++..++.+ .+|.|.. ....+ .+... .......+..+.+.+++.+++++ .+|.
T Consensus 111 W~~~~~~-~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g-~~G~ 184 (327)
T 2xbg_A 111 WSQIPLD-PKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVS-SRGS 184 (327)
T ss_dssp CEECCCC-TTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEE-TTSS
T ss_pred ceECccc-cCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEE-CCCc
Confidence 4433211 1233457778877666655554 4565432 22223 23322 23455678999999988877666 4555
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCccEEEEEEccC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRI 236 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~ 236 (479)
+..-+-..+..+..+. ......+..+.+.++++.+ .++.+|.+++.+.+.+. .|..+..- ......+.++.+.++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~-tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE-NWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE-EECCCBCTTSSCCSCEEEEEESSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC-eeEeccCCcccCCcceEEEEecCC
Confidence 5443211133334332 2334568889999888755 55567887776433222 23222211 112345889999987
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+..++++ .+|.| ++....+ .+|..+...... ...+.++.|.+++. +++++.+|.|.-++-
T Consensus 261 ~~~~~~g-~~g~i-~~S~DgG------------~tW~~~~~~~~~-~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 261 NEVWLAG-GAGAL-LCSQDGG------------QTWQQDVDVKKV-PSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SCEEEEE-STTCE-EEESSTT------------SSCEECGGGTTS-SSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CEEEEEe-CCCeE-EEeCCCC------------cccEEcCccCCC-CCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 7766655 46766 3333222 233322111111 24577888876555 555667888766653
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.18 E-value=0.0047 Score=58.16 Aligned_cols=232 Identities=7% Similarity=-0.020 Sum_probs=136.8
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCe--EEEeEEEeCC
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQ--FECNATLEGH 133 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~--~~~~~~~~~~ 133 (479)
..+.+.....|+..+++... .... ......+..++|++.+..|+.+ ...+.|..+++.... ......+...
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~--~~~~----~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSE--YTSL----IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp CEEEEEETTEEEEECTTSCS--CEEE----ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEeccceeEEEccCCcc--eeEe----ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 35556667788888887322 1111 2345678899999866666555 456789999987521 0112233333
Q ss_pred CCcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCC
Q psy14815 134 ENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDK 210 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~ 210 (479)
......+++.+.+..|+. -...+.|.+.++..... ...+.......+.++++|.+..|+.... .+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE---EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce---EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 456788999885444544 45577899888876531 2222223344789999996666655542 37888888875
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
... .......-.....|++++++..|+.+. ..+.|..+|+..... ..+...... -.....+
T Consensus 235 ~~~----~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~-l~~P~gl 296 (400)
T 3p5b_L 235 VDI----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSL 296 (400)
T ss_dssp CSC----EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-------------EEEEECSST-TSSEEEE
T ss_pred Ccc----EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-------------EEEEeCCCC-CCCCEEE
Confidence 442 111222335678999998887776664 456788888743211 111111111 2344566
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++. .+.++.+-...+.|..++..+++
T Consensus 297 ~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 297 AVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred EEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 663 34455566667888888866665
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.17 E-value=0.0025 Score=59.81 Aligned_cols=227 Identities=9% Similarity=0.008 Sum_probs=132.9
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCc
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENE 136 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 136 (479)
.+.++....|+..++... .... . ......+..++|.+.+..|+.+ ...+.|..+++..+... ..+......
T Consensus 89 ~l~~~~~~~I~~i~~~~~--~~~~--~--~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~~ 160 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRS--EYTL--L--LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLES 160 (386)
T ss_dssp EEEEECBSCEEEECTTSC--CCEE--E--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--EEECSSCSC
T ss_pred eeEeecCccceeeccCCC--cEEE--E--ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--EEEeCCCCC
Confidence 344455567777777632 1111 1 1234568899999865555544 45689999999876522 222222234
Q ss_pred EEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cC-CcEEEEecCCccc
Q psy14815 137 VKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YD-DTVKLFKEDKAEA 213 (479)
Q Consensus 137 v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~ 213 (479)
...+++.+.+..|+.+ ...+.|.+.++..... .............++++|.+..|.... .. +.|..++++....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 5678888755555444 4567788888765421 112222234568899998666555554 34 6788888875432
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.......-.....++++|++..|+.+. ..+.|..+|+..... . ..+... ......+++
T Consensus 238 ----~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------------~--~~~~~~-~~~P~giav- 296 (386)
T 3v65_B 238 ----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-------------K--AVISQG-LPHPFAITV- 296 (386)
T ss_dssp ----EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-------------E--EEECSS-CSSEEEEEE-
T ss_pred ----EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-------------E--EEEECC-CCCceEEEE-
Confidence 111122334578999998777665554 557788888642211 1 111111 334567777
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.++.+-...+.|..++..+++
T Consensus 297 ~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 297 FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCEEEEeeCCCCeEEEEECCCCc
Confidence 345566666667888888855554
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.0038 Score=56.49 Aligned_cols=197 Identities=11% Similarity=0.149 Sum_probs=120.8
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC----CC---EEEEEeC---CCcEEEEEeCC-CCce
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN----GQ---FLATCSR---DKSVWVWEVGE-EDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~---~l~~~~~---dg~i~vwd~~~-~~~~ 169 (479)
...+++....++-+.+||+ +|+ .+..+.. +.+..+..-|+ |+ ++++... +++|.+|++.. ...+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~--~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGK--MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSC--EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CccEEEEEcCCCCEEEEcC-CCc--EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 3466777777889999999 565 4455543 55677766652 22 2333333 47899998852 2122
Q ss_pred eeeeee----eccccceeEEEE--ecC-CC-EEEEEEcCCcEEEEecC---CcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 170 ECAAVI----NAHIQDVKKVRF--HPF-DN-ILASASYDDTVKLFKED---KAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 170 ~~~~~~----~~~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
..+... ......+..+|+ +|. +. ++++...+|.+..|++. .+....+.++++.. .+.+-.+...+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC
Confidence 222111 011145666777 664 43 67888889999999884 33334455666654 45788999999889
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe-ccccccEEEEEe--cCCCC-eEEEEe-CCCeEEEcccC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISW--CHLTD-LIATAC-GDDAIRIFKEN 313 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~--~~~~~-~l~~~~-~dg~i~vw~~~ 313 (479)
.|+.+-++..|..++...... ...+.+..+. ++-...+..|++ .++++ ||++++ .+++..+||.+
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~----------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGG----------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSC----------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCC----------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999999986655555322211 1224444442 222346888888 45555 555555 67899999986
No 285
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.05 E-value=0.0059 Score=54.25 Aligned_cols=230 Identities=10% Similarity=0.106 Sum_probs=140.9
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-.+|..+.||.=. ..+++|+|+++.+.++.+.-..+ +...+....+..+.-|+++....+.........-.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~ 150 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 150 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGT
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcc
Confidence 34577777777665 67899999999998887665432 34555666788899999875333322222222223
Q ss_pred CCcEEEEEECCCCCEEEEEEC-------CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CC-CEEEEEeC---CC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NG-QFLATCSR---DK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-~~l~~~~~---dg 156 (479)
...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+++|......+.+.. .. ..|+.+.. .+
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc---ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 567888888999988766543 378999999887 4567788865443333321 11 13333333 25
Q ss_pred cEEEEEeCCC--Cc--e--eeeeeeec---cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 157 SVWVWEVGEE--DE--Y--ECAAVINA---HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 157 ~i~vwd~~~~--~~--~--~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.+++-++... .. . +....+.. ..+-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-....
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~----i~~nrIS~d~ 303 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGET 303 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSC
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE----EEEeccCCCc
Confidence 8999998543 11 0 11111111 122344677888778888899999999999998875 4433434455
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|..-+.+....-++.....|.|.--.+
T Consensus 304 iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 304 IFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp EEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred eEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 544444434344555556666655544
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.03 E-value=0.0073 Score=54.83 Aligned_cols=201 Identities=9% Similarity=-0.001 Sum_probs=120.2
Q ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~~ 168 (479)
..+..++|.+.+..| .+-...+.|..+++..+... ...+...-.....+++.+.+..|+ +-...+.|.++++.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 356789999855555 44455688999998766311 111222223466888887555444 445567899999876421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-C
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-D 245 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~ 245 (479)
. ............+++.|.+..|+.+. ..+.|..++++.... ..+ ....-.....+++++++..|+.+. .
T Consensus 114 -~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~--~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 114 -K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FII--INSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp -E--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC--EEE--ECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -E--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe--EEE--EECCCCCccEEEEeccCCEEEEEECC
Confidence 1 11222334568999999766665555 257888888874332 111 122234568999999777666554 5
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.|..+|+..... +.+ ..+. ......+++.. +.++.+-...+.|..++..+++
T Consensus 187 ~~~I~~~d~dG~~~-------------~~~--~~~~-~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 187 LNFIHKSNLDGTNR-------------QAV--VKGS-LPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TTEEEEEETTSCSC-------------EEE--ECSC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEcCCCCce-------------EEE--ecCC-CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 67888888743211 111 1111 33456677753 3455555667889888886665
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.00 E-value=0.0018 Score=59.23 Aligned_cols=158 Identities=9% Similarity=0.181 Sum_probs=92.6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEE-EECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAV-WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.....+..+.+.+++.+++.+. +|.+.. +|-....+... -......+..+.+.+++..+ .++.+|.+++.+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCC
Confidence 3456789999999888777664 454443 34212233222 12345678899999988755 5556788777643323
Q ss_pred Cceeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
..+..+..- ......+.++.+.+++..++++ .+|.+ ++..+.+. .|..+.........+.++.|.+++ .+++++.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~ 311 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPD-QGFILGQ 311 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETT-EEEEECS
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCC-ceEEEcC
Confidence 322222111 0122357889998877766654 46766 44444443 454443222334567888887544 4666778
Q ss_pred CCeEEEEe
Q psy14815 246 DATVKIWK 253 (479)
Q Consensus 246 dg~i~iwd 253 (479)
+|.|.-++
T Consensus 312 ~G~i~~~~ 319 (327)
T 2xbg_A 312 KGILLRYV 319 (327)
T ss_dssp TTEEEEEC
T ss_pred CceEEEEc
Confidence 89877665
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.96 E-value=0.01 Score=53.89 Aligned_cols=158 Identities=9% Similarity=-0.040 Sum_probs=96.1
Q ss_pred cEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~vwd~~~~~~ 168 (479)
....+++.+.+..| ++-...+.|.+.++...... ..+.........+++.|.+..|+.+... +.|..+++.....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE--EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 45678888655444 45456789999998765422 2233334567899999976666665543 6788888765421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
..+ ....-...+.++++|++..|..+. ..+.|..+|+..... ..+............+++. .+..+++-...+
T Consensus 156 -~~~--~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 156 -YSL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp -EEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred -EEE--EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce--EEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 111 112234567899998766665554 567899999875332 2222221222345677775 344555555677
Q ss_pred eEEEEeccCC
Q psy14815 248 TVKIWKEYKP 257 (479)
Q Consensus 248 ~i~iwd~~~~ 257 (479)
.|..++...+
T Consensus 230 ~V~~~~~~~g 239 (316)
T 1ijq_A 230 AIFSANRLTG 239 (316)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEeCCCC
Confidence 8888886443
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.01 Score=56.89 Aligned_cols=208 Identities=12% Similarity=0.080 Sum_probs=115.5
Q ss_pred CCcEEEEEE-------CCCCCEEEEEECCC-------eEEEEECCC-CeEEE---eEEEeCCCCcEEEEEEcCC-CCEEE
Q psy14815 90 QRTIRETAW-------SPCGNFIASASFDA-------TTAVWDKRS-GQFEC---NATLEGHENEVKSVTWSKN-GQFLA 150 (479)
Q Consensus 90 ~~~v~~v~~-------~~~~~~l~t~~~dg-------~i~iwd~~~-~~~~~---~~~~~~~~~~v~~l~~~~~-~~~l~ 150 (479)
......++| +++++.|+.+...+ .|.+.+... +.+.. ...+... .....++++|+ +.+++
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYv 263 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYF 263 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEE
Confidence 346889999 99998777766554 266665443 22210 0111111 23457788995 45555
Q ss_pred EEeCCCcEEEEEeC-------CCCce-----------eeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCc
Q psy14815 151 TCSRDKSVWVWEVG-------EEDEY-----------ECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKA 211 (479)
Q Consensus 151 ~~~~dg~i~vwd~~-------~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~ 211 (479)
+-..++.|..+|+. ++..+ ..+... ......+.++|+|+++.|..+ +....|+.++....
T Consensus 264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 55667889999997 44320 111111 122345789999999964444 46678888765432
Q ss_pred ccce---Eeeeee---cCC---------CccEE-EEEEc-------cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC
Q psy14815 212 EADW---INFATL---KSH---------TSTVW-SLAFD-------RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268 (479)
Q Consensus 212 ~~~~---~~~~~~---~~~---------~~~v~-~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 268 (479)
.... ..+.-. .+. -.... .++.. +++.++++-.....|+.++. .+ .
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~--------- 411 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-I--------- 411 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-B---------
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-C---------
Confidence 2100 011110 010 11233 44444 44555555566778888873 11 1
Q ss_pred CCceEEEEEEecc-----------------------ccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCC
Q psy14815 269 DSVWKCVCTLSGH-----------------------HGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 269 ~~~~~~~~~~~~~-----------------------~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.++.+. .-.....|+++++ +.++++=..+..|+.++++...
T Consensus 412 ------v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 412 ------VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp ------EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred ------EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 1122111 1124678999986 7666666677889999887654
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.92 E-value=0.0018 Score=58.08 Aligned_cols=214 Identities=8% Similarity=0.020 Sum_probs=122.9
Q ss_pred cccccceEEEEECCCCCeEEEee-CCCcEEEEeccccccccc-ccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEK-LHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.....--.+++|.+....|..++ ..++|..||...+..... +... ...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~--------------------s~~---------- 58 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGA--------------------SSN---------- 58 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTT--------------------CCS----------
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCc--------------------ccc----------
Confidence 33444456789988655665555 789999998754322111 1000 000
Q ss_pred ccccCCcEEEEEE---CCCCCEEEEEE-------------CCCeEEEEECC---CCeEEEeEEEeCC-----------CC
Q psy14815 86 SDGHQRTIRETAW---SPCGNFIASAS-------------FDATTAVWDKR---SGQFECNATLEGH-----------EN 135 (479)
Q Consensus 86 ~~~~~~~v~~v~~---~~~~~~l~t~~-------------~dg~i~iwd~~---~~~~~~~~~~~~~-----------~~ 135 (479)
......+..+.| .|+++++++.. .+..|..+|+. +++......+... ..
T Consensus 59 -g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~ 137 (334)
T 2p9w_A 59 -GDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPF 137 (334)
T ss_dssp -SCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCE
T ss_pred -CCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccccccc
Confidence 001123578899 58877776543 25789999998 7764333343221 12
Q ss_pred cEEEEEEcCCCCEEEEEeCC-CcEEEEEeCCCCceeeee-ee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc
Q psy14815 136 EVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDEYECAA-VI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 136 ~v~~l~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~-~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
....++..++|+..++++.. +.|...+..... ..... .. .......+.|+++|+++.|++....|.+..+|+...
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 47899999999988888887 776666655431 11111 01 111223678999999998888877999999998843
Q ss_pred ccceEeeeeecC---CCccEEE-EEEccCCCE-EEEeeCCCeEEEEec
Q psy14815 212 EADWINFATLKS---HTSTVWS-LAFDRIGSR-LATCSDDATVKIWKE 254 (479)
Q Consensus 212 ~~~~~~~~~~~~---~~~~v~~-~~~~~~~~~-l~s~~~dg~i~iwd~ 254 (479)
......+. ..+ .-..... +.-..+|+. +++.+..+.+.+.+.
T Consensus 217 v~~~v~~~-~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 217 YAWPEPVK-INGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp SCCCEECE-ESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred cceeeccc-ccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 21001111 001 1112333 333346777 455555665555553
No 291
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.91 E-value=0.011 Score=54.49 Aligned_cols=156 Identities=6% Similarity=-0.064 Sum_probs=93.5
Q ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~vwd~~~~~ 167 (479)
.....+++.+.+..| ++-...+.|.+.++..... ...+...-.....+++.|.+..|+.... . +.|..+++....
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 345678888755444 5555568999999876531 2223333456789999996666655544 4 678888877642
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
... .....-...+.++++|++..|..+. ..+.|..+|+..... . ..+.........+++. .+..+++-...
T Consensus 194 ~~~---~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~--~--~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 194 RRI---IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--K--AVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp CEE---SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--E--EEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred cEE---EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce--E--EEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 211 1112233467899998666555554 567899999875432 1 1122223445677773 34444555566
Q ss_pred CeEEEEeccC
Q psy14815 247 ATVKIWKEYK 256 (479)
Q Consensus 247 g~i~iwd~~~ 256 (479)
+.|..++...
T Consensus 266 ~~V~~~~~~~ 275 (349)
T 3v64_C 266 KSINSANKFT 275 (349)
T ss_dssp TEEEEEETTT
T ss_pred CeEEEEEccC
Confidence 7787777433
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.89 E-value=0.0031 Score=60.06 Aligned_cols=205 Identities=8% Similarity=0.069 Sum_probs=117.4
Q ss_pred CcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c-EEEEEe
Q psy14815 91 RTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----S-VWVWEV 163 (479)
Q Consensus 91 ~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~-i~vwd~ 163 (479)
.....++|+|+ ...|+.+...+.|+.+|..+++. ..+.........++++++++ |+++...+ . +..++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v---~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV---DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE---EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE---EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 45678999984 45566665548999999988853 23333445689999999999 55554422 1 333332
Q ss_pred CCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... .....+. .......++++| ++.+.++-..++.|+.+|..++.... .+..... ...-..++|+|++++|+.
T Consensus 215 ~~~~--~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~-~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 215 ASGF--TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDT-KGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GGTT--CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSC-CSSCEEEEECTTSSEEEE
T ss_pred CCCe--ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCC-CCCcccEEEeCCCCEEEE
Confidence 2211 1001111 223456788999 67766666677889999987554211 1111111 222346999999996554
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-----------eccccccEEEEEe---------cCCCCeEEEE
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-----------SGHHGRTIYDISW---------CHLTDLIATA 301 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~l~~---------~~~~~~l~~~ 301 (479)
+ ...+.|+.++......... ....+.-. ....-.....+++ .+++.++++-
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~--------~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD 361 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLA--------VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCD 361 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBC--------CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccC--------cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEE
Confidence 4 4567899988653211100 00000000 0001224567888 6677777776
Q ss_pred eCCCeEEEccc
Q psy14815 302 CGDDAIRIFKE 312 (479)
Q Consensus 302 ~~dg~i~vw~~ 312 (479)
...+.|+.++.
T Consensus 362 ~~n~~I~~~~~ 372 (433)
T 4hw6_A 362 RDSHTVRVLTP 372 (433)
T ss_dssp TTTTEEEEECT
T ss_pred CCCCEEEEECC
Confidence 66788888874
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.89 E-value=0.015 Score=53.62 Aligned_cols=241 Identities=9% Similarity=0.057 Sum_probs=122.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....|+|.|+|+++++ ..+|.|++++ .+++ ..+... . .......
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~--~~~~~~------------------------------~-v~~~g~~ 73 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK--KLVASF------------------------------D-VANVGEA 73 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE--EEEEEC------------------------------C-CCCSTTC
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc--eEeecc------------------------------c-eeecCCC
Confidence 45688999999975554 4568888886 2222 111000 0 0011234
Q ss_pred cEEEEEECCC---CCEEEEEEC----C----CeEEEEECCCC--e---EEEe-EEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy14815 92 TIRETAWSPC---GNFIASASF----D----ATTAVWDKRSG--Q---FECN-ATLEG-HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 92 ~v~~v~~~~~---~~~l~t~~~----d----g~i~iwd~~~~--~---~~~~-~~~~~-~~~~v~~l~~~~~~~~l~~~~ 153 (479)
....|+++|+ +..|+.+.. + +.|..|+...+ . .+.+ ..+.. .......+.|.|||.+.++.+
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6788999997 445544433 3 56777876654 1 1111 12321 112346799999998666543
Q ss_pred C-------------CCcEEEEEeCCCC----ceeeeeee-eccccceeEEEEec-CCCEEEEEEcCC---cEEEEecCCc
Q psy14815 154 R-------------DKSVWVWEVGEED----EYECAAVI-NAHIQDVKKVRFHP-FDNILASASYDD---TVKLFKEDKA 211 (479)
Q Consensus 154 ~-------------dg~i~vwd~~~~~----~~~~~~~~-~~~~~~v~~l~~~~-~~~~l~~~~~dg---~i~i~d~~~~ 211 (479)
. .|.|..++....- .......+ .++ .....++|+| +++++++-.... .|.+.. .+
T Consensus 154 ~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G 230 (354)
T 3a9g_A 154 DAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KG 230 (354)
T ss_dssp CTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TT
T ss_pred CCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CC
Confidence 2 1345544443210 00000111 122 2346899999 566554432221 233332 11
Q ss_pred cc-------------c-eEeeeeecCCCccEEEEEEc-------cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 212 EA-------------D-WINFATLKSHTSTVWSLAFD-------RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 212 ~~-------------~-~~~~~~~~~~~~~v~~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
.. . ..++..+.........++|. .+|.++++.-..+.|...++......
T Consensus 231 ~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~---------- 300 (354)
T 3a9g_A 231 GNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEV---------- 300 (354)
T ss_dssp CBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCE----------
T ss_pred CcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcc----------
Confidence 10 0 01222231123456788883 46666666656677877776432110
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.....+.......+..+++.|||.++++..
T Consensus 301 --~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 301 --RKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp --EEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred --cceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 111222211145788999999998766654
No 294
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.81 E-value=0.022 Score=52.85 Aligned_cols=230 Identities=11% Similarity=0.115 Sum_probs=141.5
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-.+|..+.||.=. ..++.|+|+++.+.++.+.-..+ +...+....+..+.-|+++....+.........-.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~ 149 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 149 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGT
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcc
Confidence 44567777777654 67899999999998887765432 34455666788899999975333322222222223
Q ss_pred CCcEEEEEECCCCCEEEEEEC-------CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC---CEEEEEeCC---C
Q psy14815 90 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG---QFLATCSRD---K 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~~d---g 156 (479)
...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+++|......+....+. ..++.+... +
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC---CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc---ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 567888888999998875542 478999999887 456778886554444433211 234444332 7
Q ss_pred cEEEEEeCCC--Cc--e--eeeeeee---ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 157 SVWVWEVGEE--DE--Y--ECAAVIN---AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 157 ~i~vwd~~~~--~~--~--~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.+++-++... .. . +....+. ...+-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-....
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~----i~~nrIs~~~ 302 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGET 302 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSC
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee----eeeecccCCc
Confidence 8999998643 10 0 1111111 1122345788888778888999999999999998875 3333334444
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|..-+.+....-++.....|.|.--.+
T Consensus 303 iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 303 IFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred eEEecccCCCCcEEEEccCceEEEEEE
Confidence 544444444444444556665554444
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.81 E-value=0.0019 Score=57.97 Aligned_cols=163 Identities=9% Similarity=0.134 Sum_probs=108.0
Q ss_pred CCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCC----C--CcEEEEEE---cCCCCEEEEEeC-----
Q psy14815 90 QRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGH----E--NEVKSVTW---SKNGQFLATCSR----- 154 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~----~--~~v~~l~~---~~~~~~l~~~~~----- 154 (479)
.--..+++|.+....+..++ ..++|..||...+....+ .+..- . ..+..+.| .|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 33445688988666666666 689999999986653333 33321 1 13679999 588777765432
Q ss_pred --------CCcEEEEEeC---CCCceeeeeeeecc-----------ccceeEEEEecCCCEEEEEEcC-CcEEEEecCCc
Q psy14815 155 --------DKSVWVWEVG---EEDEYECAAVINAH-----------IQDVKKVRFHPFDNILASASYD-DTVKLFKEDKA 211 (479)
Q Consensus 155 --------dg~i~vwd~~---~~~~~~~~~~~~~~-----------~~~v~~l~~~~~~~~l~~~~~d-g~i~i~d~~~~ 211 (479)
+..+..||+. +++.... ..+... ......++..++|+..++++.. +.|...+....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 5779999998 5533222 122111 1247899999999999999988 88877777643
Q ss_pred ccceEeee-ee--cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 212 EADWINFA-TL--KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 212 ~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
.. .... .. .......+.++++|+++.|++....|.|..+|+..
T Consensus 170 ~~--~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TV--STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CE--EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EE--eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 21 1111 11 11223467899999999988887799999999863
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=0.0014 Score=62.48 Aligned_cols=157 Identities=10% Similarity=0.087 Sum_probs=99.9
Q ss_pred CcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C----cEEEEEeC
Q psy14815 91 RTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-K----SVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g----~i~vwd~~ 164 (479)
.....++++| ++..|+.+...+.|+.+|+.+++.. .+.........++|+++++.|+++... + .+..++..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 3567899998 4666766666588999999887532 223344568899999999977766542 2 23334433
Q ss_pred CCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
... .....+.. ......++++| ++.++++-..++.|..++...... ..+..... ......++|+|++++|+.+
T Consensus 214 g~~--~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~-~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 214 SGF--KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQD-SGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp GTS--CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSS-SSCCEEEEECTTSSEEEEE
T ss_pred Cce--eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCC-CCcceeEEEcCCCCEEEEE
Confidence 221 11112221 23356789999 677666666788999999875442 11222222 2346789999999955544
Q ss_pred -eCCCeEEEEeccC
Q psy14815 244 -SDDATVKIWKEYK 256 (479)
Q Consensus 244 -~~dg~i~iwd~~~ 256 (479)
...+.|..++...
T Consensus 288 d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 288 VVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEEET
T ss_pred ECCCCEEEEEeCCc
Confidence 4677899988753
No 297
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.79 E-value=0.012 Score=55.15 Aligned_cols=155 Identities=6% Similarity=-0.058 Sum_probs=92.8
Q ss_pred cEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~vwd~~~~~~ 168 (479)
....+++.+.+..| ++-...+.|.+.++.... ....+...-.....+++.|.+..|+.+.. . +.|..+++.....
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~--~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 44667888755444 444556789888887553 12223333356789999987766666554 3 6788888776422
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
. ......-...+.|+++|++..|..+ ...+.|..+|+..... . ..+.........+++. .+..+++-...+
T Consensus 238 ~---~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~--~~~~~~~~~P~giav~-~~~ly~td~~~~ 309 (386)
T 3v65_B 238 R---IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--K--AVISQGLPHPFAITVF-EDSLYWTDWHTK 309 (386)
T ss_dssp E---EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC--E--EEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred E---EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee--E--EEEECCCCCceEEEEE-CCEEEEeeCCCC
Confidence 1 1112223346789999866555554 4567899999875432 1 1122223445677773 344555555677
Q ss_pred eEEEEeccC
Q psy14815 248 TVKIWKEYK 256 (479)
Q Consensus 248 ~i~iwd~~~ 256 (479)
.|..++...
T Consensus 310 ~V~~~~~~~ 318 (386)
T 3v65_B 310 SINSANKFT 318 (386)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 788887433
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.77 E-value=0.066 Score=57.40 Aligned_cols=277 Identities=10% Similarity=0.116 Sum_probs=144.6
Q ss_pred ccceEEEEECCC------CCeEEEeeC-CCcEEEEecccccccccccC----CC---------ccceEEEeecCCcEEEe
Q psy14815 11 QGRVWNVSWNPQ------GTMISSCGE-DKNIRLWVMVIREPYEKLHG----LP---------VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 11 ~~~V~~l~~s~~------~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~i~~w 70 (479)
...|.|+++.|. +++++.|.. |++|+|+++.+.+.+....- .| ....+..+..+|.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 368999996 99999999986554432211 11 12344555567777666
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-EEEEEcCC--CC
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-KSVTWSKN--GQ 147 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~l~~~~~--~~ 147 (479)
.++..............| ..++.-..+...+..-+.+..+....++.-+ ++. ....+. ...+ ....|+.. ..
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l-~~s~l~--~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKL-VFSNVN--LKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSE-EEEEBS--SSCCCEEEEECCSSSTT
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cce-EEeccC--hHHhceEeccCcccCCC
Confidence 554322222222222233 3455544454444443344445555555433 331 222222 1223 34445442 23
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---------------------------
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------------------------- 200 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------------------- 200 (479)
-++.. .++.+++..+.....+. .+.+. -...++.++++|+.+.++.+..+
T Consensus 708 g~v~~-~~~~LrI~~i~~~~~~~-~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 708 SLALA-NNSTLTIGTIDEIQKLH-IRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEEE-CSSCEEEEEECCSSSEE-EEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred cEEEE-cCCceEEEEecccCCee-EEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 44443 45669999986653322 22222 23467888898877765554421
Q ss_pred ----------------------CcEEEEecCCcccceEeeeeecCCCccEEEEE---EccC-CCEEEEee----------
Q psy14815 201 ----------------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLA---FDRI-GSRLATCS---------- 244 (479)
Q Consensus 201 ----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~-~~~l~s~~---------- 244 (479)
+.|++.|..+.+. .....+.. ...+.+++ |..+ ..+++.|+
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~--i~~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~ 861 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEV--LHAHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEP 861 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCE--EEEEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSC
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeE--EEEEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCCCCCC
Confidence 1234444432221 01111221 22344444 3322 46788776
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..|.|++|++.. ...+.+..... .+++++++-- +| +|++|- ..+|++|++...+
T Consensus 862 ~~Gri~vf~v~~-------------~kL~lv~~~~v--~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 862 KQGRIVVFQYSD-------------GKLQTVAEKEV--KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp CCEEEEEEEEET-------------TEEEEEEEEEE--SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTS
T ss_pred CceEEEEEEEEC-------------CEEEEEEEEEc--CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCc
Confidence 357899999851 22344443332 5678887643 34 455443 4799999997654
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.77 E-value=0.042 Score=56.34 Aligned_cols=231 Identities=8% Similarity=-0.003 Sum_probs=130.6
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeE--EEeEEEeCCC
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQF--ECNATLEGHE 134 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~--~~~~~~~~~~ 134 (479)
.+.......|+..++.... .. .+ ......+..++|.+....|+ +-...+.|+.+++..... .....+....
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~--~~--~l--~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSE--YT--SL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp EEEEECBSSEEEECTTSCC--CE--EE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccccceeEeeccCCc--ce--ee--ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 3444555667777665321 11 11 12346778999998555554 445567899998875311 1223333334
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-CcEEEEecCCc
Q psy14815 135 NEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKA 211 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~i~d~~~~ 211 (479)
.....|++.+.+..|+.+ ...+.|.+.++..... ...+.........|+++|.+..|+.... . +.|...++...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~---~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE---EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 556789998877655555 4568899999886532 1222223345789999997655555543 2 67888888754
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
.. .......-.....|++++.+..|+.+. ..+.|...++..... ..+..-.+. -.....|+
T Consensus 548 ~~----~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-------------~~v~~~~~~-l~~P~gla 609 (791)
T 3m0c_C 548 DI----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSLA 609 (791)
T ss_dssp CE----EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------EEEEECTTT-TSSEEEEE
T ss_pred ce----EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-------------EEEecCCCc-cCCCCEEE
Confidence 32 112222335678999998777776664 456788888743211 111111111 22344666
Q ss_pred ecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 291 WCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.. +.++++-...+.|...+..+++
T Consensus 610 v~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 610 VFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 633 3344444556778777766654
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.74 E-value=0.03 Score=52.57 Aligned_cols=160 Identities=10% Similarity=-0.006 Sum_probs=98.2
Q ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~ 166 (479)
......+++.+. +.+.++-...+.|.+.++..... ...+...-.....|++.|.+..|+.... .+.|...++...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 356778888874 44445555678999999886642 2233333456789999997666666653 367888888764
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.... .....-...+.|++++++..|..+. ..+.|..+|++.... ..+............+++. .+..+++-..
T Consensus 236 ~~~~---~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~l~~P~gl~v~-~~~lywtd~~ 309 (400)
T 3p5b_L 236 DIYS---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDII 309 (400)
T ss_dssp SCEE---EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC--EEEEECSSTTSSEEEEEEE-TTEEEEEESS
T ss_pred ccEE---EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc--EEEEeCCCCCCCCEEEEEe-CCEEEEecCC
Confidence 3211 1222224568899998776666654 467899999875442 2222221222344566663 2344455556
Q ss_pred CCeEEEEeccCC
Q psy14815 246 DATVKIWKEYKP 257 (479)
Q Consensus 246 dg~i~iwd~~~~ 257 (479)
.+.|..+|...+
T Consensus 310 ~~~V~~~~~~~G 321 (400)
T 3p5b_L 310 NEAIFSANRLTG 321 (400)
T ss_dssp SCSEEEEESSSC
T ss_pred CCeEEEEEcCCC
Confidence 677888885444
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.74 E-value=0.019 Score=52.97 Aligned_cols=248 Identities=11% Similarity=0.026 Sum_probs=126.7
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCC---CCEEEEEeC----C----
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSR----D---- 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~----d---- 155 (479)
-.....++|.|+|+ |+++..+|.|++++ .+++ ..+..+. ........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 35678999999997 55556679999997 4554 3333322 22356889999997 555655543 2
Q ss_pred CcEEEEEeCCCC-c---eee-eeeeec-cccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccc--
Q psy14815 156 KSVWVWEVGEED-E---YEC-AAVINA-HIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEAD-- 214 (479)
Q Consensus 156 g~i~vwd~~~~~-~---~~~-~~~~~~-~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~-- 214 (479)
..|..|+..... . .+. +..+.. .......++|.|+|.+.++.+. .|.|.-++....-..
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 567778776531 1 111 111221 1123467999999987776442 245666655432000
Q ss_pred ---eEeeeeecCCCccEEEEEEcc-CCCEEEEeeCCCe-EEEEeccCCCCCCCCCCCCC----CCceEEEEEEecccccc
Q psy14815 215 ---WINFATLKSHTSTVWSLAFDR-IGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDN----DSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 215 ---~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 285 (479)
...+. ..++.. ...++|+| ++..+++-..... -.|.-+..+.. ...+.... .....++..+.. ....
T Consensus 185 pf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~n-yGwp~~~g~~~~~~~~~p~~~~~~-~~~a 260 (354)
T 3a9g_A 185 PFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGN-YGWPLATGKAGRGEFVDPVIDTGS-ETWA 260 (354)
T ss_dssp SSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCB-CCTTTCCSCCCCTTSCCCSEECTT-CCCC
T ss_pred CCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCc-CCCCcccCCCCCCCCcCCEeecCC-CCcC
Confidence 00011 122332 35799999 5655444322221 11222222211 10000000 000011222211 1345
Q ss_pred EEEEEec-------CCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 286 IYDISWC-------HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 286 i~~l~~~-------~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
...++|. .++.++++.-..+.|...++..... ... ...+..+....+..+++.|||...
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~---~~~---~~~~~~~~~~rp~~v~~~pDG~ly 326 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNME---VRK---ISTFFKNVFGRLRDVVIDDDGGIL 326 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGC---EEE---EEEECTTTSCCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCc---ccc---eeeeccCCCCCeeEEEECCCCcEE
Confidence 7788884 4677777666677888888765321 000 112222224578899999999643
No 302
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.73 E-value=0.023 Score=51.48 Aligned_cols=157 Identities=10% Similarity=-0.009 Sum_probs=95.4
Q ss_pred cEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~ 168 (479)
....+++.+.+. +.++-...+.|.++++..... .............+++.|.+..|+.+.. .+.|...++.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR--KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 456788887444 445555678999999876532 2222234456789999987666666653 57788888765421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.. .....-...+.++++|++..|..+. ..+.|..+|++.... ..+. .........+++.. +..+.+-...+
T Consensus 158 ~~---~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~~~~--~~~~~~P~glav~~-~~lywtd~~~~ 229 (318)
T 3sov_A 158 FI---IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR--QAVV--KGSLPHPFALTLFE-DILYWTDWSTH 229 (318)
T ss_dssp EE---EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEE--CSCCSCEEEEEEET-TEEEEEETTTT
T ss_pred EE---EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce--EEEe--cCCCCCceEEEEeC-CEEEEEecCCC
Confidence 11 1112223457899999666555554 567899999875432 1111 22234456777753 34455555667
Q ss_pred eEEEEeccCCC
Q psy14815 248 TVKIWKEYKPG 258 (479)
Q Consensus 248 ~i~iwd~~~~~ 258 (479)
.|..++...+.
T Consensus 230 ~V~~~~~~~G~ 240 (318)
T 3sov_A 230 SILACNKYTGE 240 (318)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCC
Confidence 88888865443
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.68 E-value=0.033 Score=51.34 Aligned_cols=244 Identities=11% Similarity=0.051 Sum_probs=121.7
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-..-..|+|.|+|+++++ ..+|.|.+++ +++. ..+. ++ . ......
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-~~~~--------------------~~----------~-v~~~g~ 74 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-STYA--------------------EL----------S-VYHRGE 74 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-EEEE--------------------EC----------C-CCCSTT
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-cEee--------------------cc----------e-EeecCC
Confidence 345678999999985555 4568888887 2221 1100 00 0 001223
Q ss_pred CcEEEEEECCC---CCEEEEEEC-C-----CeEEEEECCCCeE---EEe-EEEe---CCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 91 RTIRETAWSPC---GNFIASASF-D-----ATTAVWDKRSGQF---ECN-ATLE---GHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 91 ~~v~~v~~~~~---~~~l~t~~~-d-----g~i~iwd~~~~~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
.....++++|+ +..|+.+.. . +.|..++...++. +.+ ..+. ........++|.|||.+.++.+.
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 56788999998 555554433 2 6788888765421 112 2233 11123468999999976555432
Q ss_pred -------------CCcEEEEEeCCCC----ce-----eeeeee-eccccceeEEEEec-CCCEEEEEEcCCcE------E
Q psy14815 155 -------------DKSVWVWEVGEED----EY-----ECAAVI-NAHIQDVKKVRFHP-FDNILASASYDDTV------K 204 (479)
Q Consensus 155 -------------dg~i~vwd~~~~~----~~-----~~~~~~-~~~~~~v~~l~~~~-~~~~l~~~~~dg~i------~ 204 (479)
.|.|..++....- .. .....+ .++ .....++|+| +++++++-.....+ .
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 1455555544310 00 000111 122 2356789999 56655543333321 1
Q ss_pred EEecCCccc-c-------------eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 205 LFKEDKAEA-D-------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 205 i~d~~~~~~-~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
+.-+..+.. . ..+...+. +......++| .+|..+++.-..+.|...++....... .
T Consensus 234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~--------~ 303 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRW--------R 303 (352)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEE--------E
T ss_pred EEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcce--------e
Confidence 222222210 0 01222332 2234567777 456666655566677777764322100 0
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
... ...+-.. ...+..+++.|||.++++..
T Consensus 304 ~~~-~~~~~~~-~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 304 VLR-VETALSG-FGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEE-EEEEEES-SCCEEEEEECTTSCEEEEEC
T ss_pred ecc-hheeccc-CCCeeEEEECCCCcEEEEEe
Confidence 001 1111121 35789999999998776654
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.66 E-value=0.018 Score=52.19 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=88.9
Q ss_pred CCeEEEEEC--CCCeEEEeEE----EeCCCCcEEEEEE--cCC-CC-EEEEEeCCCcEEEEEeCCC----Cceeeeeeee
Q psy14815 111 DATTAVWDK--RSGQFECNAT----LEGHENEVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEE----DEYECAAVIN 176 (479)
Q Consensus 111 dg~i~iwd~--~~~~~~~~~~----~~~~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~ 176 (479)
+++|++|++ .+++...+.. +......+..+++ ++. +. ++++...+|.+..|++... -..+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 579999966 4554222211 1111145666777 664 43 6888888999999999542 1224445554
Q ss_pred ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-cceEeeeeec-C-CCccEEEEEE--ccCCC-EEEEee-CCCeE
Q psy14815 177 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATLK-S-HTSTVWSLAF--DRIGS-RLATCS-DDATV 249 (479)
Q Consensus 177 ~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~-~~~~v~~~~~--~~~~~-~l~s~~-~dg~i 249 (479)
. .+.+..+...+....|+.+-++.-|..|+.+... .....+.... + -...+..|++ .++++ +|++.+ .+++.
T Consensus 178 l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 178 M-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp C-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred C-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 3 3567888999988899999998777777754222 1112233221 2 2236778877 45555 666555 67799
Q ss_pred EEEecc
Q psy14815 250 KIWKEY 255 (479)
Q Consensus 250 ~iwd~~ 255 (479)
.+||..
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999974
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.65 E-value=0.026 Score=51.95 Aligned_cols=248 Identities=13% Similarity=0.073 Sum_probs=124.5
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCC---CCEEEEEeCC------CcE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSRD------KSV 158 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~d------g~i 158 (479)
.....++|.|+|++++ +..+|.|.+++ .++...+..+. ........++|+|+ +..|+++... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4567999999998555 45679999998 45433333222 12356889999998 5556655442 568
Q ss_pred EEEEeCCCCc--ee-eeeeee---ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccce----
Q psy14815 159 WVWEVGEEDE--YE-CAAVIN---AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEADW---- 215 (479)
Q Consensus 159 ~vwd~~~~~~--~~-~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~---- 215 (479)
..|+...... .+ .+..+. ........++|.|+|.+.++.+. .|.|.-++....-...
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 8888764311 11 111122 11123468999999977666432 1456666654310000
Q ss_pred -----EeeeeecCCCccEEEEEEcc-CCCEEEEeeCCCeE------EEEeccCCCCCCCCCCCCC----CCceEEEEEEe
Q psy14815 216 -----INFATLKSHTSTVWSLAFDR-IGSRLATCSDDATV------KIWKEYKPGNSAGIPTPDN----DSVWKCVCTLS 279 (479)
Q Consensus 216 -----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i------~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~ 279 (479)
.......++ .....++|+| ++..+++-.....+ .+.-+..+.. ...+.... .....++..+.
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~n-yGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGN-YGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCB-CCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCc-CCCCcccCCCCCCCCcCCeEecC
Confidence 000001122 2356789999 55555443322221 2333322221 00000000 00001122222
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
. ......++| .++.++++.-..+.|...+++.......... ...+. .....+..+++.|||...
T Consensus 266 ~--~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~---~~~~~-~~~~rp~~v~~~pdG~ly 329 (352)
T 2ism_A 266 Q--GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLR---VETAL-SGFGRLREVQVGPDGALY 329 (352)
T ss_dssp T--CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEE---EEEEE-ESSCCEEEEEECTTSCEE
T ss_pred C--CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecc---hheec-ccCCCeeEEEECCCCcEE
Confidence 1 234567777 4666666666667777777664331000000 11111 123578999999999644
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.55 E-value=0.00043 Score=70.29 Aligned_cols=202 Identities=8% Similarity=-0.011 Sum_probs=111.8
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCC----CeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeC
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~ 164 (479)
..+..++|.+.+..|+.+. ..+.|..+++.+ .. ....+.........|++.+.+..|+ +-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~--~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC--CCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc--eEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 4567889998766666554 457899999875 21 1111111122345678875444444 44456789999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... ...+.........++++|.+.+|+.+.. . +.|..+++..... ..+ ....-.....|+|+|++..|+.
T Consensus 484 g~~~---~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l--~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 484 GVKR---KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSL--VTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCE---EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEE--SCSSCSSCCCEEECTTTCCEEE
T ss_pred CCce---EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEE--EeCCCCCccEEEEeccCCEEEE
Confidence 6521 1112222234578899996655554442 2 6788887764332 111 1112234567999988666554
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+ +..+.|..+++..... ..+...... ......|++..+ .++++....+.|..++..+++
T Consensus 557 aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~-~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EETTTTEEEEECSSSSCC-------------EEECCCSSS-CSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred EecCCCeEEEEccCCCce-------------EEEEecCCc-CCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 4 4567899988743211 111111111 122334555443 455555667889988877665
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.49 E-value=0.058 Score=49.38 Aligned_cols=199 Identities=11% Similarity=0.070 Sum_probs=115.7
Q ss_pred CcEEEEEECCCCCEEEEE------------ECCCeEEEEECCC--CeEEEeEEEeC-----CCCcEEEEEEcC--CCC-E
Q psy14815 91 RTIRETAWSPCGNFIASA------------SFDATTAVWDKRS--GQFECNATLEG-----HENEVKSVTWSK--NGQ-F 148 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~------------~~dg~i~iwd~~~--~~~~~~~~~~~-----~~~~v~~l~~~~--~~~-~ 148 (479)
.....+...|+|..++++ ..+|.|.++|..+ ++...+ .+.+ .......+.+.+ ++. +
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 345566678877554444 1689999999974 333322 3332 234677788766 344 4
Q ss_pred EEEEe-C--CCcEEEEEeCCCC-ceeeeeeeecc-ccceeEEEEecCCCEEEEEEc-----------------CCcEEEE
Q psy14815 149 LATCS-R--DKSVWVWEVGEED-EYECAAVINAH-IQDVKKVRFHPFDNILASASY-----------------DDTVKLF 206 (479)
Q Consensus 149 l~~~~-~--dg~i~vwd~~~~~-~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~-----------------dg~i~i~ 206 (479)
|+++. . +..|.+|++.... ....+..+.+. -...+.+.+.++|++.++... .|.|.-+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 54443 2 4678888887643 22333333322 234689999999987777541 2345555
Q ss_pred ecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 207 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
|.. +. ..+...-...+.++|+||++.|+.+. ..+.|..|++..... ......+.. ...
T Consensus 209 d~~--~~-----~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~------------l~~~~~~~~--~g~ 267 (355)
T 3sre_A 209 SPN--DV-----RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT------------LTPLRVLSF--DTL 267 (355)
T ss_dssp CTT--CC-----EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC------------EEEEEEEEC--SSE
T ss_pred ECC--eE-----EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc------------EecCEEEeC--CCC
Confidence 442 21 11112224468899999998877654 567899999853221 122223321 456
Q ss_pred EEEEEecC-CCCeEEEEeCC-CeEEEcc
Q psy14815 286 IYDISWCH-LTDLIATACGD-DAIRIFK 311 (479)
Q Consensus 286 i~~l~~~~-~~~~l~~~~~d-g~i~vw~ 311 (479)
.-.+++.+ +|.+.+++..+ +.|..|+
T Consensus 268 PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred CceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 77899999 59888766544 3444443
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.45 E-value=0.11 Score=51.72 Aligned_cols=203 Identities=8% Similarity=-0.015 Sum_probs=117.0
Q ss_pred cCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~ 166 (479)
....+..++|++.+..|+.+. ..+.|..+++..... ....+...-.....+++.+.+..|+.+ ...+.|.+.++...
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 345678999998766666554 467899999876531 122333333568899999866655555 45688999998865
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
... ......-.....|++.|.+..|+.... .+.|...+++.... ..+ ....-.....++++++++.|+.+.
T Consensus 117 ~~~---~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~--~~l--~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 117 LRK---VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FII--INSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SCE---EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEE--ECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CEE---EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce--EEE--EeCCCCCCcEEEEEccCCEEEEEe
Confidence 321 112123344678999997655555543 45677777764432 111 122344678999999877776654
Q ss_pred -CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|...|+...... . + ..+. ......+++..+ .++.+-...+.|...|..+++
T Consensus 190 ~~~~~I~~~~~dG~~~~------------~-~--~~~~-~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQ------------A-V--VKGS-LPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp TTTCCEEEESSSCCEEC-------------------------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred CCCCeEEEecCCCCccE------------E-E--EeCC-CCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 4567777776422111 0 0 1111 112345666555 444444556778888876664
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.052 Score=51.97 Aligned_cols=162 Identities=9% Similarity=0.142 Sum_probs=96.8
Q ss_pred cEEEEEECC-CCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEE-------cCCCCEEEEEeCCC-c---
Q psy14815 92 TIRETAWSP-CGNFIASA-SFDATTAVWDKRSGQFECNATLEG-HENEVKSVTW-------SKNGQFLATCSRDK-S--- 157 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~-------~~~~~~l~~~~~dg-~--- 157 (479)
....|+|+| +...|+.+ ...+.|++.|+.++....+..... .......++| +++++.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 34444444 445689999999886433222111 1235889999 99999777776654 2
Q ss_pred ---EEEEEeCCCCceee---eeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecC-------Cccc------c---
Q psy14815 158 ---VWVWEVGEEDEYEC---AAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKED-------KAEA------D--- 214 (479)
Q Consensus 158 ---i~vwd~~~~~~~~~---~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~-------~~~~------~--- 214 (479)
|.+++......+.. ...+... .....++++|+ +.++++-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 55665443112210 0122221 23457889994 5555566677889999987 3332 0
Q ss_pred -eEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEecc
Q psy14815 215 -WINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEY 255 (479)
Q Consensus 215 -~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~ 255 (479)
...+... ........++|+|+++.|+.+ +....|+.++..
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1122222 223445789999999965544 456788887754
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.42 E-value=0.039 Score=49.53 Aligned_cols=191 Identities=7% Similarity=0.061 Sum_probs=103.0
Q ss_pred CCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..++++.....+.........+.+ +++.++.|+.+ ..+.+||..+.. +.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES-WH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence 45666777654 6789999999987665544332222223333 56777777765 458889988752 33
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEc---------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+..+.........+.+ ++++++.|+. -..+.+||..+.. |..+..+......-..+.+ +++.++
T Consensus 132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v 205 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV--KDKIFA 205 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE--CCEEEE
Confidence 33222211111122222 5677777764 3458899987653 4444333322222222333 466667
Q ss_pred EeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcc
Q psy14815 242 TCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFK 311 (479)
Q Consensus 242 s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~ 311 (479)
.|+.+ ..+.+||+... .|..+..+... ......+.+ ++++++.|+.+ ..+.+||
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLN-------------EWKMVSPMPWK-GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTT-------------EEEECCCCSCC-BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEE
T ss_pred EeCCCCCCCCceEEEeeCCCC-------------cEEECCCCCCC-ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEc
Confidence 76643 35788886432 33333222211 111222223 66777777754 5688888
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+.+
T Consensus 270 ~~~~~ 274 (306)
T 3ii7_A 270 TETDK 274 (306)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 87764
No 311
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.40 E-value=0.11 Score=53.24 Aligned_cols=159 Identities=9% Similarity=-0.014 Sum_probs=95.3
Q ss_pred CCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~ 166 (479)
......|++.+.+..|+ +-...+.|.+.++..... ...+...-.....|++.|.+..|+.+.. .+.|...++...
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 34566788887665554 445578999999986642 2223334456889999997666766653 267888888765
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-Eee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~ 244 (479)
.. .......-...+.|++++.+..|..+. ..+.|..+++..... ..+..-...-.....|++. +.+|+ +-.
T Consensus 548 ~~---~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~--~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 548 DI---YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp CE---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred ce---EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce--EEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 32 122222234578899998666666554 456799999875443 1122111122234466664 33444 444
Q ss_pred CCCeEEEEeccCC
Q psy14815 245 DDATVKIWKEYKP 257 (479)
Q Consensus 245 ~dg~i~iwd~~~~ 257 (479)
..+.|...|...+
T Consensus 621 ~~~~I~~~dk~tG 633 (791)
T 3m0c_C 621 INEAIFSANRLTG 633 (791)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEeCCCC
Confidence 5567777775444
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.37 E-value=0.066 Score=47.93 Aligned_cols=191 Identities=18% Similarity=0.239 Sum_probs=101.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..+.++..+..+........++.+ ++..++.|+.++ .+.+||+.+. .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN-EWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT-EEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC-eEe
Confidence 55666676654 3689999999987665544332222222323 567777777654 4778888765 233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~G 211 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVL--NNLLYAVG 211 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEE--CCEEEEEC
Confidence 33222221111222222 56777777643 358889987543 4444333322222223333 46677777
Q ss_pred eCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----eEEEcccC
Q psy14815 244 SDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----AIRIFKEN 313 (479)
Q Consensus 244 ~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~i~vw~~~ 313 (479)
+.+ ..+.+||+.. ..|..+..+... ...-..+. -++++++.|+.++ .+.+||..
T Consensus 212 G~~~~~~~~~~~~yd~~~-------------~~W~~~~~~~~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTT-------------NAWRQVADMNMC-RRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CBSSSSBCCCEEEEETTT-------------TEEEEECCCSSC-CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCCcccceEEEEeCCC-------------CCEeeCCCCCCc-cccCeEEE--ECCEEEEECCcCCCcccccEEEEcCC
Confidence 654 3678888643 234433322211 11111222 2667777777653 47888887
Q ss_pred CCC
Q psy14815 314 PEA 316 (479)
Q Consensus 314 ~~~ 316 (479)
+.+
T Consensus 276 ~~~ 278 (302)
T 2xn4_A 276 TDK 278 (302)
T ss_dssp TTE
T ss_pred CCe
Confidence 764
No 313
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.35 E-value=0.0018 Score=65.85 Aligned_cols=154 Identities=11% Similarity=-0.001 Sum_probs=86.1
Q ss_pred EEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCce
Q psy14815 93 IRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEY 169 (479)
Q Consensus 93 v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~ 169 (479)
...+++.+.+ .++++-...+.|.+.++...... ..+.........+++.|.+..|+.+.. .+.|..+++......
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee
Confidence 4457777544 44444455678999998765422 222222345678899986665555543 267888777654211
Q ss_pred eeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
. .....-...+.|+|+|++..|. +-...+.|..+++..... ..+............|++..+ ..+++....+.
T Consensus 533 ~---l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 533 S---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp E---ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC--EEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred E---EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce--EEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 1 1111123456899998765454 444567899999875332 122211111122334555443 34455556678
Q ss_pred EEEEec
Q psy14815 249 VKIWKE 254 (479)
Q Consensus 249 i~iwd~ 254 (479)
|..++.
T Consensus 607 V~~~d~ 612 (699)
T 1n7d_A 607 IFSANR 612 (699)
T ss_dssp EEEEET
T ss_pred EEEEEc
Confidence 888885
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.32 E-value=0.042 Score=50.88 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=98.0
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee-----
Q psy14815 98 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----- 170 (479)
Q Consensus 98 ~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----- 170 (479)
.+.++..++.+- ++.||.-++..+..-....++. .-..+..+..+|+|++|+..+. ..|.|-.+..+....
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 344666666665 4788888887443112222221 1236788999999999988855 578888887321000
Q ss_pred ----eeeeeec------cccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeee------eecCCCccEEEE
Q psy14815 171 ----CAAVINA------HIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSL 231 (479)
Q Consensus 171 ----~~~~~~~------~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~v~~~ 231 (479)
....+.- ...+|..+.|+|- +..|++-..|+.|++||+......+..+. ........|.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0111211 2467999999994 46899999999999999987433222111 112233678999
Q ss_pred EEccCCCEEEEee--CCCeEEEE
Q psy14815 232 AFDRIGSRLATCS--DDATVKIW 252 (479)
Q Consensus 232 ~~~~~~~~l~s~~--~dg~i~iw 252 (479)
+|.+++-.|+..+ ..|.|+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999887777755 77877554
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.31 E-value=0.078 Score=47.39 Aligned_cols=191 Identities=12% Similarity=0.154 Sum_probs=102.5
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCe---EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCC
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEED 167 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 167 (479)
++..++.|+.+ ..+.+||..+++ +..+..+........++.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 45666777654 468999999887 6655444332222223323 56677777654 35888898765
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~ 212 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALL--NDHIYVV 212 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEE--CCEEEEE
Confidence 23333322221111222222 57778887754 458889987643 4444333322222223333 4666677
Q ss_pred eeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEccc
Q psy14815 243 CSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFKE 312 (479)
Q Consensus 243 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~~ 312 (479)
|+.+ ..+.+||+.. ..|..+..+... ......+.+ ++++++.|+.+ ..+.+||.
T Consensus 213 GG~~~~~~~~~v~~yd~~~-------------~~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRT-------------DSWTTVTSMTTP-RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp CCBCSSSBCCCEEEEETTT-------------TEEEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred eCCCCCcccceEEEEeCCC-------------CcEEECCCCCCc-ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 7654 4688888743 234433322221 111122222 66777777765 35778888
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
.+.+
T Consensus 277 ~~~~ 280 (301)
T 2vpj_A 277 IIDS 280 (301)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7654
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.26 E-value=0.19 Score=50.19 Aligned_cols=199 Identities=10% Similarity=0.050 Sum_probs=122.0
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 167 (479)
-..+..++|++.+..|+.+ ..++.|..+++...... ..+.........+++.+.+..|+.+ ...+.|.+.++....
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 4568899999866665544 45789999998765422 2223222456788888766555555 446789999987653
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
. .. .....-.....++++|....|..... .+.|...++..... . .+...-.....++++++++.|+.+.
T Consensus 114 ~-~~--l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~---~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 114 R-QV--LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--T---TLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp C-EE--EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--E---EEECSCSSEEEEEEETTTTEEEEEET
T ss_pred E-EE--EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--E---EEECCCCCcceEEEccccCEEEEEEC
Confidence 2 11 11122344689999996555555542 56788888775442 1 1112345678999999877776654
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|...|+..... +.+ ... ......+++.. +.++.+-...+.|...|..+++
T Consensus 186 ~~~~I~~~d~dG~~~-------------~v~---~~~-l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 186 DTNLIESSNMLGLNR-------------EVI---ADD-LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TTTEEEEEETTSCSC-------------EEE---EEC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEcCCCCce-------------EEe---ecc-CCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 456788888743211 111 111 23345777754 4455555557888888866654
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.19 E-value=0.041 Score=51.00 Aligned_cols=159 Identities=11% Similarity=0.095 Sum_probs=93.0
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce-------
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW------- 215 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------- 215 (479)
.+|..++.+ .++.||.-++.....++.+..-. -.-..+..+..+|+|++|+..+. ..|.|..+..+....
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 456656655 34778877877543333222110 01225788999999999998864 578888887322000
Q ss_pred -EeeeeecC------CCccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 216 -INFATLKS------HTSTVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 216 -~~~~~~~~------~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
...+.+.- ...+|..+.|+|- +..|++-..|+.|++||+......+. .. .+... ...+... ...
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L---~k~~~-~fg~d~~-~~e 181 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VL---NKPNN-SFGLDAR-VND 181 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EE---SCCCS-EEESCSS-CCC
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-ch---hcccc-ccCCCcc-cce
Confidence 01111111 3578999999995 46899999999999999976322111 00 00000 0111122 367
Q ss_pred EEEEEecCCCCeEEEEe--CCCeEEEc
Q psy14815 286 IYDISWCHLTDLIATAC--GDDAIRIF 310 (479)
Q Consensus 286 i~~l~~~~~~~~l~~~~--~dg~i~vw 310 (479)
|.+++|..++-.|...+ ..|.|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999998765555533 66666543
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.18 E-value=0.12 Score=46.50 Aligned_cols=147 Identities=10% Similarity=0.101 Sum_probs=79.0
Q ss_pred CCCCEEEEEEC----C-------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------CcEEE
Q psy14815 100 PCGNFIASASF----D-------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--------KSVWV 160 (479)
Q Consensus 100 ~~~~~l~t~~~----d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~v 160 (479)
.++..++.|+. + ..+.+||..++++..+..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEE
Confidence 46777777773 1 2378899999887655433321111122222 56666777632 35888
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||..+. .+.....+.........+. -++++++.|+. + ..+.+||..+.. |..+..+......-..+.+
T Consensus 122 ~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~- 195 (315)
T 4asc_A 122 YDRLSF-KWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATVH- 195 (315)
T ss_dssp EETTTT-EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-
T ss_pred ECCCCC-cEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEEE-
Confidence 998775 2333332222111122222 35677778876 2 468899987643 4444333322222223333
Q ss_pred cCCCEEEEeeCCC-----eEEEEecc
Q psy14815 235 RIGSRLATCSDDA-----TVKIWKEY 255 (479)
Q Consensus 235 ~~~~~l~s~~~dg-----~i~iwd~~ 255 (479)
+++.++.|+.++ .+.+||+.
T Consensus 196 -~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 196 -DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp -TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred -CCEEEEEeccCCCCccceEEEEECC
Confidence 566777777554 47777763
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.13 E-value=0.13 Score=45.83 Aligned_cols=212 Identities=8% Similarity=0.116 Sum_probs=127.7
Q ss_pred CCcEEEEeccccccccc--ccC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCE
Q psy14815 32 DKNIRLWVMVIREPYEK--LHG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 104 (479)
Q Consensus 32 dg~v~iwd~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 104 (479)
+..|.|-|+..+....+ +.. +|. ..+++......+.++|++. . ...+. ......|.-=.|-.+ +.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~-~~ViALrag~~LQiFnlet--K-~klks---~~~~e~VvfWkWis~-~~ 119 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADSAIMNPA-SKVIALKAGKTLQIFNIEM--K-SKMKA---HTMTDDVTFWKWISL-NT 119 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEEEECSS-SSEEEEEETTEEEEEETTT--T-EEEEE---EECSSCEEEEEECSS-SE
T ss_pred CCEEEEEECCCCCCccccccccceeeeCCC-ccEEEEecCCeEEEechHH--h-hhhcc---eecCCccEEEEecCC-Ce
Confidence 34788889887655432 111 233 3455666688999999983 1 11111 123467777777644 45
Q ss_pred EEEEECCCeEEEEECCCCeEEEeEEEeCCC----CcEEEEEEcCCCCEEEEEeC-------CCcEEEEEeCCCCceeeee
Q psy14815 105 IASASFDATTAVWDKRSGQFECNATLEGHE----NEVKSVTWSKNGQFLATCSR-------DKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 105 l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~l~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~ 173 (479)
|+-.+. ..|.-|++.... .+...+..|. ..|..-..+++.++++..+- .|.+.+|..+.. ..+
T Consensus 120 L~lVT~-taVyHWs~~~~s-~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~sQ 193 (365)
T 2xzh_A 120 VALVTD-NAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQ 193 (365)
T ss_dssp EEEEES-SEEEEEESSTTC-CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----EEE
T ss_pred EEEEcC-CcEEEEcccCCC-CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----ccc
Confidence 655553 689999997532 3556666554 35666667778887665442 367889998764 445
Q ss_pred eeeccccceeEEEEec--C-CCEEEEEEcC---CcEEEEecCCc---ccce--Eeeeee---cCCCccEEEEEEccCCCE
Q psy14815 174 VINAHIQDVKKVRFHP--F-DNILASASYD---DTVKLFKEDKA---EADW--INFATL---KSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~--~-~~~l~~~~~d---g~i~i~d~~~~---~~~~--~~~~~~---~~~~~~v~~~~~~~~~~~ 239 (479)
.+.+|......+.... . .++++.+... +.+++.++... ...+ +....+ .....-..++..++....
T Consensus 194 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygv 273 (365)
T 2xzh_A 194 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 273 (365)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTE
T ss_pred eeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCE
Confidence 6777765544433321 1 1244444432 58999998553 1111 011111 112334557888888888
Q ss_pred EEEeeCCCeEEEEeccCC
Q psy14815 240 LATCSDDATVKIWKEYKP 257 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~ 257 (479)
++.-+.-|.|++||+.++
T Consensus 274 iyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 274 VFLITKYGYIHLYDLETG 291 (365)
T ss_dssp EEEEETTSEEEEEETTTC
T ss_pred EEEEeCCcEEEEEEcccC
Confidence 999999999999998543
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.12 E-value=0.067 Score=49.22 Aligned_cols=196 Identities=11% Similarity=0.002 Sum_probs=99.0
Q ss_pred CCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCC--------------
Q psy14815 101 CGNFIASASF----------DATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRD-------------- 155 (479)
Q Consensus 101 ~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~d-------------- 155 (479)
++.+++.|+. -..+.+||..+.++..+..+. .......++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 4556666654 146899999999876655443 2112222232 467777788754
Q ss_pred -------------------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEE
Q psy14815 156 -------------------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVK 204 (479)
Q Consensus 156 -------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~ 204 (479)
..+.+||..+. .+..+..+......-.+++.. ++++++.|+. ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ-QWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT-EEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCC-cEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceE
Confidence 46889998775 333333322111111223332 5677777764 34577
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC----------------------CeEEEEeccCCCCCCC
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD----------------------ATVKIWKEYKPGNSAG 262 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------------------g~i~iwd~~~~~~~~~ 262 (479)
.||++.....|..+..+..........+...+++.++.|+.+ ..+.+||+..
T Consensus 221 ~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~------ 294 (357)
T 2uvk_A 221 ELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN------ 294 (357)
T ss_dssp EEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------
T ss_pred EEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC------
Confidence 788743444555544432221111111122246666666632 2467777642
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC------eEEEcccCCCC
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------AIRIFKENPEA 316 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg------~i~vw~~~~~~ 316 (479)
..|..+..+... ...-.++ ..++++++.|+.++ .|.+++++.++
T Consensus 295 -------~~W~~~~~~p~~-r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 295 -------GKWDKSGELSQG-RAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp ---------CEEEEECSSC-CBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred -------CceeeCCCCCCC-cccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 345555444332 1111222 23677888887653 35556777766
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.10 E-value=0.15 Score=45.83 Aligned_cols=191 Identities=14% Similarity=0.185 Sum_probs=100.5
Q ss_pred CCCEEEEEEC----C-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCC
Q psy14815 101 CGNFIASASF----D-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEE 166 (479)
Q Consensus 101 ~~~~l~t~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 166 (479)
++.+++.|+. + ..+.+||..++++..+..+........++.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4556666654 2 4688999999887655444332222223333 56677776643 35888998765
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++
T Consensus 148 -~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv 220 (308)
T 1zgk_A 148 -EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HNCIYA 220 (308)
T ss_dssp -EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred -eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CCEEEE
Confidence 23333222221122222222 57777777754 458889987543 3443333322222223333 566677
Q ss_pred EeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcc
Q psy14815 242 TCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFK 311 (479)
Q Consensus 242 s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~ 311 (479)
.|+.+ ..+.+||+... .|..+..+... ......+.+ ++++++.|+.+ ..+.+||
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd 284 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETE-------------TWTFVAPMKHR-RSALGITVH--QGRIYVLGGYDGHTFLDSVECYD 284 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTT-------------EEEECCCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEE
T ss_pred EeCCCCCCccceEEEEeCCCC-------------cEEECCCCCCC-ccceEEEEE--CCEEEEEcCcCCCcccceEEEEc
Confidence 77654 45888887432 33333222211 111112222 56777777654 4577888
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+.+
T Consensus 285 ~~~~~ 289 (308)
T 1zgk_A 285 PDTDT 289 (308)
T ss_dssp TTTTE
T ss_pred CCCCE
Confidence 77654
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.01 E-value=0.2 Score=45.95 Aligned_cols=30 Identities=13% Similarity=0.350 Sum_probs=22.2
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEec
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVM 40 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~ 40 (479)
-...+.|+|.|+|++|+.+...|.|++++.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQA 46 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEET
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeC
Confidence 345689999999983444556788988874
No 323
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.94 E-value=0.24 Score=45.53 Aligned_cols=248 Identities=9% Similarity=-0.006 Sum_probs=124.0
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-EeEEE----eCCCCcEEEEEEcCC---CCEEEEEeC--------
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE-CNATL----EGHENEVKSVTWSKN---GQFLATCSR-------- 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~----~~~~~~v~~l~~~~~---~~~l~~~~~-------- 154 (479)
.....|+|.|+|+.++.+...|.|++++.. ++.. .+..+ .........++++|+ +..|+++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999834455667999999853 3311 11111 112345789999996 455555432
Q ss_pred CCcEEEEEeCCCC-ce---eee-eeee---ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCccc
Q psy14815 155 DKSVWVWEVGEED-EY---ECA-AVIN---AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEA 213 (479)
Q Consensus 155 dg~i~vwd~~~~~-~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~ 213 (479)
...|..|+..... .. +.+ ..+. ........+.|.|+|.+.++.+. .|.|.-++.+..-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 2356667765431 11 111 1111 11122457999999976666443 24576677653210
Q ss_pred c----------eEeeeeecCCCccEEEEEEccCCCEEEEeeC--CCeEEEEeccCCCCCC-------------CCCCC--
Q psy14815 214 D----------WINFATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKEYKPGNSA-------------GIPTP-- 266 (479)
Q Consensus 214 ~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~-------------~~~~~-- 266 (479)
. ...+. -.++ .....++|+|....|+++.. ++.=.|.-+..+...- .++..
T Consensus 177 ~~npf~~~~~~~~~i~-a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIW-SYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEE-EECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEE-EEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 0 00011 1123 23678999994334444332 2222333332222100 00000
Q ss_pred -CCCCceEEEEEEeccccccEEEEEecC-------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccce
Q psy14815 267 -DNDSVWKCVCTLSGHHGRTIYDISWCH-------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 338 (479)
Q Consensus 267 -~~~~~~~~~~~~~~~~~~~i~~l~~~~-------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v 338 (479)
.......++..+.. ......+.|.. ++.++++.-..+.|...+++.++ ... ...++......+
T Consensus 255 ~~~~~~~~P~~~~~~--~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~------~~~-~~~~~~~~~~rp 325 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKD--SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK------VTE-DGRILTDRGQRI 325 (353)
T ss_dssp SSCTTSCCCSEEESS--CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE------EEE-EEEESGGGCCCE
T ss_pred CCCCCccCCeEEeCC--CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe------Eee-eEEcccCCCCce
Confidence 00000112222322 23567788864 46677766667788777776432 000 111222223578
Q ss_pred eEEEecCCCCCC
Q psy14815 339 NCVAWNPVVPEP 350 (479)
Q Consensus 339 ~~~~~sp~~~~l 350 (479)
..+++.|||...
T Consensus 326 ~~v~~~pdG~ly 337 (353)
T 2g8s_A 326 RDVRTGPDGYLY 337 (353)
T ss_dssp EEEEECTTSCEE
T ss_pred eEEEECCCCcEE
Confidence 899999999744
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.89 E-value=0.25 Score=45.14 Aligned_cols=191 Identities=11% Similarity=0.132 Sum_probs=107.3
Q ss_pred ceEEEEECCCCCeEEEee------------CCCcEEEEeccccc-cccc--ccC--------CC---------ccc-eEE
Q psy14815 13 RVWNVSWNPQGTMISSCG------------EDKNIRLWVMVIRE-PYEK--LHG--------LP---------VET-SLR 59 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~------------~dg~v~iwd~~~~~-~~~~--~~~--------~~---------~~~-~~~ 59 (479)
....+...|+|..+++++ .+|.|.++|..+.. .... +.+ +| ++. .+.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 455677888876555552 68999999987321 1111 111 11 111 122
Q ss_pred Eee---cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE-----------------CCCeEEEEEC
Q psy14815 60 QLV---EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-----------------FDATTAVWDK 119 (479)
Q Consensus 60 ~~~---~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~-----------------~dg~i~iwd~ 119 (479)
.+. .+.++.+|+++..+.............-...+.+.+.++|.+.++.. ..|.|.-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 221 13455666655433333333333223345788999999998777654 1245555554
Q ss_pred CCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEE
Q psy14815 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASA 197 (479)
Q Consensus 120 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~ 197 (479)
++.. .... .-...+.++|+||++.|+++. ..+.|..|++...........+ ......-.+++.+ +|++.+++
T Consensus 211 --~~~~--~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 --NDVR--VVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp --TCCE--EEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred --CeEE--Eeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 3322 1122 224568999999998887775 4678999999754333333333 2244567889999 59887766
Q ss_pred EcC-CcEEEEecC
Q psy14815 198 SYD-DTVKLFKED 209 (479)
Q Consensus 198 ~~d-g~i~i~d~~ 209 (479)
..+ +.|..|+..
T Consensus 285 ~~~g~~v~~~~P~ 297 (355)
T 3sre_A 285 HPNGMRIFFYDAE 297 (355)
T ss_dssp ESCHHHHHSCCTT
T ss_pred cCCceEEEEECCC
Confidence 544 345445544
No 325
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.86 E-value=0.048 Score=58.35 Aligned_cols=228 Identities=10% Similarity=0.109 Sum_probs=128.9
Q ss_pred ECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 19 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.+|..+.||.=. ..++.|+|+++.+.++.+.-..+ +...+....+..|.-|++.....+.........-...
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~ 151 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccC
Confidence 456666666543 67899999999888877655432 3445566678889999997422221111111111146
Q ss_pred cEEEEEECCCCCEEEEEE-------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--C-CCEEEEEeC---CCcE
Q psy14815 92 TIRETAWSPCGNFIASAS-------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--N-GQFLATCSR---DKSV 158 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~~~l~~~~~---dg~i 158 (479)
.|..-..+++.++++..| -.|.+.+|..+.+ ..+.+++|......+.... . ...++.+.. .+.+
T Consensus 152 QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kL 228 (1630)
T 1xi4_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (1630)
T ss_pred eeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceE
Confidence 788888888888877554 3488999998876 3456667765444443321 1 123332222 2688
Q ss_pred EEEEeCCC----Cce--eeeeeeec---cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 159 WVWEVGEE----DEY--ECAAVINA---HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 159 ~vwd~~~~----~~~--~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
++-++... ... +....+.. ...-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-...+|.
T Consensus 229 hi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~----i~~~ris~~~iF 304 (1630)
T 1xi4_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGETIF 304 (1630)
T ss_pred EEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh----hhhccccCCceE
Confidence 88888543 110 00001111 112234677777777888889999999999998775 222222333343
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
..+-+....-++.....|.|.--.+
T Consensus 305 ~~~~~~~~~g~~~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 305 VTAPHEATAGIIGVNRKGQVLSVCV 329 (1630)
T ss_pred EeccCCCCCceEEEcCCceEEEEEE
Confidence 3333332223333445555544444
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.82 E-value=0.28 Score=44.63 Aligned_cols=250 Identities=14% Similarity=0.077 Sum_probs=129.6
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe----CCCCcEEEEEEcCC---CCEEEEE---eCCCcEE
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE----GHENEVKSVTWSKN---GQFLATC---SRDKSVW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~l~~~~~---~~~l~~~---~~dg~i~ 159 (479)
-...+.++|.|+|.++++--..|.|++++..+++...+..+. ........|+++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 456789999999987777665899999987666543333221 23456789999995 3445443 2345566
Q ss_pred EEEeCCCC----c---eee-eeeee-ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccce--
Q psy14815 160 VWEVGEED----E---YEC-AAVIN-AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEADW-- 215 (479)
Q Consensus 160 vwd~~~~~----~---~~~-~~~~~-~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~-- 215 (479)
-|...... . .+. +..+. ........|.|.|+|.+.++.+. .|.|.-++.+..-...
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 66665421 1 111 11121 11223467999999987777542 3555555554321000
Q ss_pred ---EeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCC----CCCceEEEEEEeccccccEE
Q psy14815 216 ---INFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPD----NDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 216 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~ 287 (479)
..+. -.+|.. ...++|+|++..+++- +.|+.-.|--+..+.+. ..+... ......++..+..+ .....
T Consensus 191 f~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny-GwP~~~g~~~~~~~~~P~~~~~~~-~~ap~ 266 (347)
T 3das_A 191 FPGSPVY-SYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY-GWPEAEGKGGGSGFHDPVAQWSTD-EASPS 266 (347)
T ss_dssp STTCCEE-EBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC-CTTTCCSSCCCTTCCCCSEEECTT-TCCEE
T ss_pred CCCCeEE-eeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEe-cCCcccCCCCCccccCCcEecCCC-CCCCc
Confidence 0011 124443 4578999987765543 23333333333333221 111100 00111222333322 23556
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.++|. ++.++...-..+.|....+...... .. ...++.+..+.+..++..|||..+
T Consensus 267 G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~---~~---~e~~l~~~~gR~~dv~~~pDG~ly 322 (347)
T 3das_A 267 GIAYA-EGSVWMAGLRGERLWRIPLKGTAAA---AD---PQAFLEGEYGRLRTVAPAGGDKLW 322 (347)
T ss_dssp EEEEE-TTEEEEEESTTCSEEEEEEETTEES---SC---CEEESTTTSSCEEEEEEEETTEEE
T ss_pred ceEEE-cCceeeccccCCEEEEEEecCCcee---cc---eEEeecCCCCCccEEEECCCCcEE
Confidence 77776 3555555544555555555433200 00 011223345689999999999754
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.80 E-value=0.33 Score=45.16 Aligned_cols=255 Identities=11% Similarity=0.126 Sum_probs=146.5
Q ss_pred CCCcEEEEeccccccccc--ccC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC
Q psy14815 31 EDKNIRLWVMVIREPYEK--LHG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN 103 (479)
Q Consensus 31 ~dg~v~iwd~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 103 (479)
.+..|.|-|+..+....+ +.. +|.. .+++.-...++.++|++. +...+.. .....|.-=.|-.+ +
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~-~iiALrag~~lQiFnle~---K~klks~---~~~e~VvfWkWis~-~ 117 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISADSAIMNPAS-KVIALKAGKTLQIFNIEM---KSKMKAH---TMTDDVTFWKWISL-N 117 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCSEEEECSSS-SCEEEEETTEEEEEETTT---TEEEEEE---ECSSCCCEEEEEET-T
T ss_pred CCCeEEEEECCCCCcceecccccceeeeCCCC-cEEEEecCCeEEEEchHH---hhhhcce---ecCCCceEEEecCC-C
Confidence 344788899887655432 111 2333 456666689999999983 1111111 12345665666533 4
Q ss_pred EEEEEECCCeEEEEECCCCeEEEeEEEeCCC----CcEEEEEEcCCCCEEEEEeC-------CCcEEEEEeCCCCceeee
Q psy14815 104 FIASASFDATTAVWDKRSGQFECNATLEGHE----NEVKSVTWSKNGQFLATCSR-------DKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 104 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~l~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~ 172 (479)
.|+-.+ +..|.-|++.... .+...+..|. ..|..-..+++.++++..+- .|.+.+|..+.. ..
T Consensus 118 ~l~lVT-~taVyHWsi~~~s-~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~s 191 (494)
T 1bpo_A 118 TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VS 191 (494)
T ss_dssp EEEEEC-SSEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC----CE
T ss_pred eEEEEc-CCeeEEecccCCC-CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc----cc
Confidence 565555 3689999997532 3556666554 35666667788887664432 477899998764 44
Q ss_pred eeeeccccceeEEEEecCC---CEEEEEEcC---CcEEEEecCCc---ccce--Eeeeee---cCCCccEEEEEEccCCC
Q psy14815 173 AVINAHIQDVKKVRFHPFD---NILASASYD---DTVKLFKEDKA---EADW--INFATL---KSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~---~~l~~~~~d---g~i~i~d~~~~---~~~~--~~~~~~---~~~~~~v~~~~~~~~~~ 238 (479)
+.+.+|......+....+. .+++.+... +.+++.++... ...+ +..... ..-..-..++..++...
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 5677776655544443211 344444443 78999998654 1111 111111 11233455788888888
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
.++.-+.-|.|++||+.++ .++..-+-. ..+|...+-+....=++.....|.|.--.++..
T Consensus 272 viyviTK~G~i~lyDleTg---------------t~i~~nrIs-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETG---------------TCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEEEEecCceEEEEecccc---------------eeeeeeccc-CCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 9999999999999999544 344433332 334444444333333333445555554444443
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.75 E-value=0.28 Score=43.70 Aligned_cols=146 Identities=16% Similarity=0.216 Sum_probs=80.3
Q ss_pred CCCEEEEEECCC-----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEEeCCCCc
Q psy14815 101 CGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWVWEVGEEDE 168 (479)
Q Consensus 101 ~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~ 168 (479)
++..++.|+.++ .+.+||+.++++..+..+........++.+ +++.++.|+.+ ..+.+||+.+. .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN-E 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT-E
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC-c
Confidence 566777777553 688999999987665444322222222222 56666666543 35888998765 2
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~i~v~G 258 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAV--NGLLYVVG 258 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEE--CCEEEEEC
Confidence 3333222221111222222 57788888764 368899987643 4444333222222222222 56677777
Q ss_pred eCCC-----eEEEEecc
Q psy14815 244 SDDA-----TVKIWKEY 255 (479)
Q Consensus 244 ~~dg-----~i~iwd~~ 255 (479)
+.++ .+.+||..
T Consensus 259 G~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CBCSSSBCCCEEEEETT
T ss_pred CcCCCcccccEEEEcCC
Confidence 7553 47788764
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.75 E-value=0.32 Score=44.27 Aligned_cols=248 Identities=11% Similarity=0.045 Sum_probs=123.6
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-...+.|+|.|||+++++--..|.|++++...+... .+.. + .......
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~--------------------~----------~~v~~~g 78 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGE--------------------V----------PGVSPSG 78 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEE--------------------C----------TTCCCBT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecc--------------------c----------CceeecC
Confidence 3456789999999998777765889988875433321 0000 0 0001123
Q ss_pred CCcEEEEEECCC---CCEEEEE-E--CCCeEEEEECCCC-----e---EEEe-EEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy14815 90 QRTIRETAWSPC---GNFIASA-S--FDATTAVWDKRSG-----Q---FECN-ATLEG-HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 90 ~~~v~~v~~~~~---~~~l~t~-~--~dg~i~iwd~~~~-----~---~~~~-~~~~~-~~~~v~~l~~~~~~~~l~~~~ 153 (479)
......|+++|+ +..|... + .++.|.-|.+..+ + .+.+ ..+.. ....-..|.|.|||.+.++.+
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 457788999985 3444432 2 3456666665541 1 1122 22321 122346799999998766654
Q ss_pred C-------------CCcEEEEEeCCCC----ceeeeeee-eccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc-
Q psy14815 154 R-------------DKSVWVWEVGEED----EYECAAVI-NAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA- 213 (479)
Q Consensus 154 ~-------------dg~i~vwd~~~~~----~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~- 213 (479)
. .|.|.-.+....- .......+ .+|. ....++|+|++.+.++=. .++.=.|.-+..+..
T Consensus 159 d~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny 237 (347)
T 3das_A 159 ESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY 237 (347)
T ss_dssp CTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC
T ss_pred CCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEe
Confidence 2 2455444543220 00000111 1332 356899999876554432 222222222222210
Q ss_pred c-------------eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec
Q psy14815 214 D-------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 280 (479)
Q Consensus 214 ~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (479)
. ..++..+..+......++|. ++..+...-..+.|....+...... .+....+.+
T Consensus 238 GwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~-----------~~~e~~l~~ 305 (347)
T 3das_A 238 GWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAA-----------ADPQAFLEG 305 (347)
T ss_dssp CTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEES-----------SCCEEESTT
T ss_pred cCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCcee-----------cceEEeecC
Confidence 0 01122222222355677776 3555555444555655555432110 011122223
Q ss_pred cccccEEEEEecCCCCeEEEEe
Q psy14815 281 HHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 281 ~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
. ...+.+++..|||.++++..
T Consensus 306 ~-~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 306 E-YGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp T-SSCEEEEEEEETTEEEEEEC
T ss_pred C-CCCccEEEECCCCcEEEEEc
Confidence 2 45789999999998766543
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.70 E-value=0.32 Score=43.57 Aligned_cols=145 Identities=15% Similarity=0.195 Sum_probs=80.1
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..++++.....+......-.++.+ ++..++.|+.+ ..+.+||+.+. .+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN-EWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC-eEe
Confidence 56666666543 4689999999887655444322222223333 56777777654 45888998765 233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||+.+.. |..+..+.........+.+ +++.++.|+.
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 271 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET--WTFVAPMKHRRSALGITVH--QGRIYVLGGY 271 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc--EEECCCCCCCccceEEEEE--CCEEEEEcCc
Confidence 33222221122222333 57788888765 468999987643 4444333322222222333 4666677764
Q ss_pred C-----CeEEEEec
Q psy14815 246 D-----ATVKIWKE 254 (479)
Q Consensus 246 d-----g~i~iwd~ 254 (479)
+ ..+.+||+
T Consensus 272 ~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 272 DGHTFLDSVECYDP 285 (308)
T ss_dssp CSSCBCCEEEEEET
T ss_pred CCCcccceEEEEcC
Confidence 4 35667776
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.65 E-value=0.34 Score=43.29 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=81.1
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---------CCcEEEEEeCC
Q psy14815 101 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGE 165 (479)
Q Consensus 101 ~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---------dg~i~vwd~~~ 165 (479)
++.+++.|+.+ ..+.+||..++++.....+......-.++.+ +++.++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56677777755 4699999999987655443322222222222 5666666654 34588999887
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
. .+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.+
T Consensus 179 ~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~ 251 (306)
T 3ii7_A 179 E-TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAV--GSIVY 251 (306)
T ss_dssp T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred C-eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEE--CCEEE
Confidence 5 33333222221111222222 56777777754 358889987643 4444433332223333333 56677
Q ss_pred EEeeCC-----CeEEEEecc
Q psy14815 241 ATCSDD-----ATVKIWKEY 255 (479)
Q Consensus 241 ~s~~~d-----g~i~iwd~~ 255 (479)
+.|+.+ ..+.+||..
T Consensus 252 v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EEECBCSSSBCCEEEEEETT
T ss_pred EEeCcCCCeeeeeEEEEcCC
Confidence 777744 467778863
No 332
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.60 E-value=0.36 Score=42.94 Aligned_cols=146 Identities=13% Similarity=0.208 Sum_probs=82.3
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||+.++++..+..+......-.++.+ +++.++.|+.+ ..+.+||+.+. .+.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG-HWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC-cEE
Confidence 56667777643 4789999999987766554432222222222 66777777654 45888998775 333
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|+.
T Consensus 189 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 262 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL--RGRLYAIAGY 262 (301)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE--CCEEEEEcCc
Confidence 33222221111222222 56778888764 468899987643 4444333322222223333 5667777765
Q ss_pred C-----CeEEEEecc
Q psy14815 246 D-----ATVKIWKEY 255 (479)
Q Consensus 246 d-----g~i~iwd~~ 255 (479)
+ ..+.+||..
T Consensus 263 ~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 263 DGNSLLSSIECYDPI 277 (301)
T ss_dssp CSSSBEEEEEEEETT
T ss_pred CCCcccccEEEEcCC
Confidence 5 356777763
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.43 E-value=0.19 Score=47.91 Aligned_cols=109 Identities=7% Similarity=0.092 Sum_probs=65.9
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCC---CCEEEEEeC-------
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKN---GQFLATCSR------- 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~---~~~l~~~~~------- 154 (479)
...+.++|.|+|+++++-...+.|++++..+++...+..+.. .......|+|+|+ +..|+++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 466799999999877765544579988876665443433332 2456779999995 555555543
Q ss_pred ------CCcEEEEEeCCCC-c---eee-eeeee-ccccceeEEEEecCCCEEEEEEc
Q psy14815 155 ------DKSVWVWEVGEED-E---YEC-AAVIN-AHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 155 ------dg~i~vwd~~~~~-~---~~~-~~~~~-~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
...|..|+..... . .+. +..+. ........|+|.|+|.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1346666654321 1 111 11121 11234688999999987776553
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.38 E-value=0.91 Score=45.16 Aligned_cols=306 Identities=8% Similarity=-0.038 Sum_probs=149.4
Q ss_pred cceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEe-ecCCcEEEecCCCCCCce------eeeE
Q psy14815 12 GRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL-VEDKNIRLWGKESFGNKF------TAKA 83 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~~------~~~~ 83 (479)
.....+++.+.+..| ++-...+.|.+.++........+...-..+.-+++ ...+.+.+-|........ ....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 467889999865544 44456788999998654332222111111222222 223333333322100000 0011
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVW 161 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vw 161 (479)
......-.....+++++++..|+.+. ..+.|...|+.......+ ..+.......+++..+ .++.+ ...+.|...
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~--~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED--ILYWTDWSTHSILAC 239 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE--EeCCCCCceEEEEeCC--EEEEecCCCCEEEEE
Confidence 11122345678999998766666654 457899999876542222 1211222346677544 44444 456778888
Q ss_pred EeCCCCceeeee----------eeecc------------ccceeEEEE-----------ecCC---------------CE
Q psy14815 162 EVGEEDEYECAA----------VINAH------------IQDVKKVRF-----------HPFD---------------NI 193 (479)
Q Consensus 162 d~~~~~~~~~~~----------~~~~~------------~~~v~~l~~-----------~~~~---------------~~ 193 (479)
|..+++....+. .+... .+....+++ .|.| .+
T Consensus 240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~ 319 (619)
T 3s94_A 240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATEL 319 (619)
T ss_dssp ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEE
T ss_pred ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceE
Confidence 876553221110 00000 001111221 1111 12
Q ss_pred EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCce
Q psy14815 194 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVW 272 (479)
Q Consensus 194 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 272 (479)
|+.+ ..+.|+..++....... ....+. .-..+..++|++.+..|+.+. ..+.|+.+++.....
T Consensus 320 Ll~~-~~~~i~~i~l~~~~~~~-~~~~~~-~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~------------- 383 (619)
T 3s94_A 320 LLLA-RRTDLRRISLDTPDFTD-IVLQLE-DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS------------- 383 (619)
T ss_dssp EEEE-ESSCEEEEESSSTTCCC-EECCCS-CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------
T ss_pred EEEE-cccceEEEecCCCccce-eEEecc-ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-------------
Confidence 3333 34567777776543211 111111 223467899998666665544 567888888643211
Q ss_pred EEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
. ..+.. .-.....+++... +.+..+-+..+.|.+.+++... ...+....-.....+++.|....|
T Consensus 384 ~--~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~----------~~~l~~~~l~~P~~iavdp~~G~l 449 (619)
T 3s94_A 384 Q--FVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM----------RKILISEDLEEPRAIVLDPMVGYM 449 (619)
T ss_dssp E--EEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----------CEEEECTTCCSEEEEEEETTTTEE
T ss_pred E--EEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe----------EEEEEECCCCCeeeEEEEcCCCcE
Confidence 1 11111 1235668888864 4455555667899999887653 111111223456788888864444
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.27 E-value=0.6 Score=41.91 Aligned_cols=149 Identities=11% Similarity=0.111 Sum_probs=78.2
Q ss_pred CCCCCEEEEEEC----CC-------eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEE
Q psy14815 99 SPCGNFIASASF----DA-------TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWV 160 (479)
Q Consensus 99 ~~~~~~l~t~~~----dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~v 160 (479)
..++..++.|+. ++ .+.+||..++++..+..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 346677777773 11 278899999887655444332222222323 56677777754 24778
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||..+. .+..+..+......- +++. .++++++.|+. -..+.+||..+.. |..+..+.........+.+
T Consensus 132 yd~~~~-~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 132 YDPVAA-KWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EETTTT-EEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-
T ss_pred EeCCCC-CEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEEE-
Confidence 888765 233322222111111 2222 35777777764 2358899987643 4444333322222222333
Q ss_pred cCCCEEEEeeCC-----CeEEEEeccC
Q psy14815 235 RIGSRLATCSDD-----ATVKIWKEYK 256 (479)
Q Consensus 235 ~~~~~l~s~~~d-----g~i~iwd~~~ 256 (479)
+++.++.|+.+ ..+.+||+..
T Consensus 206 -~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 206 -KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp -TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred -CCEEEEEcCcCCCCccceEEEEECCC
Confidence 46666777643 3466777643
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.20 E-value=0.65 Score=41.62 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=95.9
Q ss_pred EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC----C-------CcEEEEEeCCCCceeee
Q psy14815 104 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----D-------KSVWVWEVGEEDEYECA 172 (479)
Q Consensus 104 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----d-------g~i~vwd~~~~~~~~~~ 172 (479)
+++.|+ ..+.+||..++++.. ..+..............++..++.|+. + ..+..||..+.+ +..+
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEEC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe-EEEC
Confidence 344454 679999999998764 333322222333333457778888873 1 127778887652 3332
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcC--------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
..+.........+.+ ++++++.|+.+ ..+.+||..+.+ |..+..+......-..+. .+++.++.|+
T Consensus 83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG 156 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHTVLS--HMDLVYVIGG 156 (315)
T ss_dssp CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCcccceeEEE--ECCEEEEEeC
Confidence 222211111122222 56777777743 358889987643 444433332222222222 3456666776
Q ss_pred C-C-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----eEEEcccC
Q psy14815 245 D-D-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----AIRIFKEN 313 (479)
Q Consensus 245 ~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~i~vw~~~ 313 (479)
. + ..+.+||.... .|..+..+... ...-..+.+ ++++++.|+.++ .+.+||..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKF-------------EWKELAPMQTA-RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp BCTTSCBCCCEEEEETTTT-------------EEEECCCCSSC-CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred CCCCCcccceEEEEeCCCC-------------eEEECCCCCCc-hhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 5 2 36788886432 33333222111 111112222 567777777654 47778877
Q ss_pred CCC
Q psy14815 314 PEA 316 (479)
Q Consensus 314 ~~~ 316 (479)
+.+
T Consensus 221 ~~~ 223 (315)
T 4asc_A 221 DNK 223 (315)
T ss_dssp TTE
T ss_pred CCe
Confidence 654
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.11 E-value=0.17 Score=42.29 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=95.8
Q ss_pred CCEEEEEECCCeEEEEECCCCe---EE-EeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee---e
Q psy14815 102 GNFIASASFDATTAVWDKRSGQ---FE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA---A 173 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~---~~-~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~ 173 (479)
...|++...| +++.=...++. +. ....+.. -=..+..++|+|+|.+.++ .+|.+.-.+..+.....-. .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55554444432 10 1112211 1236789999999986666 6776655554332110000 0
Q ss_pred eee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-cceEeeeee--cCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 174 VIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATL--KSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 174 ~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.+- .--....++.|.|+|.+.++ .||.|.-++-.+.. ..|.-.... ..-=..+..|.+.|+|...+.. |+.+
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 110 00111478999999988777 56988777653322 111100000 1112467899999999876655 7774
Q ss_pred EEEeccCCCCCCCCCCCCCCCceE-EEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWK-CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+ ....+... ...|- ....+....-....-+.|.+++.+.++. +|. +|...
T Consensus 157 y--r~~~P~~~--------~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~--~Y~~~ 207 (236)
T 1tl2_A 157 Y--KALPPVSN--------QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK--FYEDY 207 (236)
T ss_dssp E--EECCCSST--------TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE--EEEES
T ss_pred E--ecCCCCCC--------CcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe--EEecC
Confidence 3 32222111 11111 0111111112244557789988877666 664 44443
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.11 E-value=1.5 Score=44.91 Aligned_cols=195 Identities=9% Similarity=0.090 Sum_probs=110.8
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
...|.++....++ .|..|+.+| +..||..+.+... ........|.++.. .++ .|..++.+ -+..+|..+.+.
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~- 133 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL- 133 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-
Confidence 3568888776665 666677654 7899998875332 11112235777654 344 56667666 577888765421
Q ss_pred eeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----CCccEEEEEEccCCCEEEEe
Q psy14815 170 ECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 170 ~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~ 243 (479)
...... ......|.++...+++.+.+ |+.+ -+..|+..+... ... .... ....|.++...+++..|..|
T Consensus 134 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~--~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF--EGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp EEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE--EEE-CCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred EEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce--EEe-cCCCccccccceeEEEEEECCCCEEEEE
Confidence 111000 01124578888877776554 5554 477788765432 111 1111 12348888888777766666
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+. +-+..+|..... ......+. ...|.++....++.+.+. +. +-+.+++..+.+
T Consensus 209 t~-~Gl~~~~~~~~~-------------~~~~~~l~---~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 209 TE-GYLFQYFPSTGQ-------------IKQTEAFH---NNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTP 262 (758)
T ss_dssp EE-EEEEEEETTTTE-------------EEEEEEEE---EEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSC
T ss_pred EC-CCCeEEcCCCCe-------------EEeccCCC---CCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCc
Confidence 64 457788753221 11111221 346888888888876654 44 457788776543
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.89 E-value=1.3 Score=42.23 Aligned_cols=114 Identities=8% Similarity=0.047 Sum_probs=60.9
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-...+.|+|.|+|+++++-...+.|++++..++... .+. ++.. ........
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~-~~~--------------------~~~~--------~~~~~~g~ 76 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK-TVF--------------------QVPE--------IVNDADGQ 76 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEE--------------------ECTT--------CCCCTTSS
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe-EEe--------------------cCCc--------cccccCCC
Confidence 345679999999997777644456877764333211 000 0000 00000124
Q ss_pred CcEEEEEECCC---CCEEEEEEC-------------CCeEEEEECCCC--eE---EEeE-EEeC-CCCcEEEEEEcCCCC
Q psy14815 91 RTIRETAWSPC---GNFIASASF-------------DATTAVWDKRSG--QF---ECNA-TLEG-HENEVKSVTWSKNGQ 147 (479)
Q Consensus 91 ~~v~~v~~~~~---~~~l~t~~~-------------dg~i~iwd~~~~--~~---~~~~-~~~~-~~~~v~~l~~~~~~~ 147 (479)
.....|+|+|+ +..|..+.. ...|.-+++..+ +. +.+. .+.. .......|.|.|||.
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 57789999995 455544432 134555554322 11 1122 2221 123578999999998
Q ss_pred EEEEEe
Q psy14815 148 FLATCS 153 (479)
Q Consensus 148 ~l~~~~ 153 (479)
+.++.+
T Consensus 157 Lyv~~G 162 (454)
T 1cru_A 157 IYYTIG 162 (454)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 766654
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.79 E-value=0.51 Score=47.80 Aligned_cols=204 Identities=10% Similarity=0.096 Sum_probs=107.2
Q ss_pred CCCCEEEEEECC----CeEEEEECCCCeEEEeE-E-----EeCCCCcEEEEEEcC-CCCEEEEEeCCC------cEEEEE
Q psy14815 100 PCGNFIASASFD----ATTAVWDKRSGQFECNA-T-----LEGHENEVKSVTWSK-NGQFLATCSRDK------SVWVWE 162 (479)
Q Consensus 100 ~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~~v~~l~~~~-~~~~l~~~~~dg------~i~vwd 162 (479)
.++..++.|+.+ ..+.+||..++++..+. . +...... .+++..+ +++.++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456677777753 46889999998876554 2 1111112 2333333 677777777543 578888
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC--cEEEEecCCcccceEeeee---ecCCCccEEEEEEccC-
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD--TVKLFKEDKAEADWINFAT---LKSHTSTVWSLAFDRI- 236 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~- 236 (479)
..+. .+..+..+...... .+.+...++++++.|+.++ .+.+||..+.. |..+.. ..........+.+..+
T Consensus 475 ~~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 475 MKTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp TTTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred CCCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCC
Confidence 8774 33333322221111 2233323788888888655 68999987643 444332 1111222233555554
Q ss_pred CCEEEEeeC--C-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----
Q psy14815 237 GSRLATCSD--D-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----- 304 (479)
Q Consensus 237 ~~~l~s~~~--d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----- 304 (479)
++.++.|+. + +.+.+||+....- . ....|..+..........- ++....++++++.|+.+
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w-~------~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENA-T------EPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCS-S------CCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCC
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCcc-c------cceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCC
Confidence 556667765 2 3588888754431 0 0012444443211101111 22222336777777643
Q ss_pred ---CeEEEcccCCCC
Q psy14815 305 ---DAIRIFKENPEA 316 (479)
Q Consensus 305 ---g~i~vw~~~~~~ 316 (479)
..+.+||..+.+
T Consensus 623 ~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 623 DRTNSIISLDPLSET 637 (695)
T ss_dssp CTTTSEEEEETTTTE
T ss_pred CCCCeEEEEECCCCe
Confidence 457788877654
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.74 E-value=0.22 Score=41.63 Aligned_cols=156 Identities=15% Similarity=0.211 Sum_probs=84.3
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----EeEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~----~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+..++|+|++.+.++ .+|.+.-.+..+.+.. ....+- +.. ...++.|.++|.+.++ .||.|.-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46779999999886666 6687776666442100 011111 111 2478899999987776 56988777653
Q ss_pred CCCceeeee--ee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCC-cccceEeee-ee-cCCCccEEEEEEccCC
Q psy14815 165 EEDEYECAA--VI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK-AEADWINFA-TL-KSHTSTVWSLAFDRIG 237 (479)
Q Consensus 165 ~~~~~~~~~--~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~-~~-~~~~~~v~~~~~~~~~ 237 (479)
+...-.-+. .. ..-=..+..|.|.|+|.+.++. |+.+.-..... ....+.... .+ ...-....-+.|.+++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 221111100 00 1111457899999999877766 77643322211 111110001 11 1222344557799988
Q ss_pred CEEEEeeCCCeEEEEeccCC
Q psy14815 238 SRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~ 257 (479)
...++. ++ ++|....+
T Consensus 194 ~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 194 TLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp CEEEEE--TT--EEEEESCC
T ss_pred cEEEEe--CC--eEEecCCc
Confidence 766555 66 55655443
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.69 E-value=1.2 Score=40.59 Aligned_cols=130 Identities=9% Similarity=0.008 Sum_probs=65.7
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEEEeC-CCCceeeeeeeeccccceeE
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEVG-EEDEYECAAVINAHIQDVKK 184 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~vwd~~-~~~~~~~~~~~~~~~~~v~~ 184 (479)
..+.+||..+.++..+..+......-.++... ++++++.|+. ...+..||+. ....+..+..+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 57999999999887765544221111233332 5666666654 3457778872 22233333332211111111
Q ss_pred EEEecCCCEEEEEEcC----------------------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 185 VRFHPFDNILASASYD----------------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 185 l~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+...++++++.|+.+ ..+.+||+.+. .|..+..+......-.++. .+++.++.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 322 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQGRAYGVSLP--WNNSLLII 322 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEE--ETTEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCCCcccceeEE--eCCEEEEE
Confidence 1222356777777742 24778888754 3455544443322222333 35677777
Q ss_pred eeCC
Q psy14815 243 CSDD 246 (479)
Q Consensus 243 ~~~d 246 (479)
|+.+
T Consensus 323 GG~~ 326 (357)
T 2uvk_A 323 GGET 326 (357)
T ss_dssp EEEC
T ss_pred eeeC
Confidence 8754
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.66 E-value=0.91 Score=48.96 Aligned_cols=214 Identities=7% Similarity=0.104 Sum_probs=124.0
Q ss_pred CCcEEEEecccccccccc--cC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCE
Q psy14815 32 DKNIRLWVMVIREPYEKL--HG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 104 (479)
Q Consensus 32 dg~v~iwd~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 104 (479)
..+|.|-|+..+....+- .. +| ...+++.-...++.+++++.... .+ ......+|.-=.|-.+. .
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP-~~~iiALrag~~lQiFnl~~k~k---lk---s~~~~e~VvfWkWis~~-~ 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKAGKTLQIFNIEMKSK---MK---AHTMTDDVTFWKWISLN-T 118 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCC-CcceEEEecCCeEEEeehHHhhh---hc---ccccCCCceEEEecCCC-e
Confidence 447899998876544221 11 23 33566666788999999973111 11 11224566666775443 4
Q ss_pred EEEEECCCeEEEEECCCCeEEEeEEEeCC----CCcEEEEEEcCCCCEEEEEe-------CCCcEEEEEeCCCCceeeee
Q psy14815 105 IASASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCS-------RDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 105 l~t~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~ 173 (479)
|+-.+ +..|.-|++.... .+...+..| ...|..-..+++.++++..+ ..|.+.+|..+.. ..+
T Consensus 119 l~lVT-~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----~sQ 192 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQ 192 (1630)
T ss_pred eEEEc-CCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----cch
Confidence 54444 3579999996532 344444444 34566666777888766443 3578999998764 344
Q ss_pred eeeccccceeEEEEe--cC-CCEEEEEEc---CCcEEEEecCCc---ccceE--eeeeec---CCCccEEEEEEccCCCE
Q psy14815 174 VINAHIQDVKKVRFH--PF-DNILASASY---DDTVKLFKEDKA---EADWI--NFATLK---SHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~--~~-~~~l~~~~~---dg~i~i~d~~~~---~~~~~--~~~~~~---~~~~~v~~~~~~~~~~~ 239 (479)
.+.+|......+... +. ...++.+.. .+.++|-++... .+.+. .+.... ....-..++..++....
T Consensus 193 ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 566676655444442 11 223333332 268999988653 11110 000000 11223346777877788
Q ss_pred EEEeeCCCeEEEEeccCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~ 259 (479)
++..+.-|.|.+||+.++..
T Consensus 273 iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred EEEEecCceEEEEecccchh
Confidence 88899999999999976643
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.66 E-value=0.78 Score=46.42 Aligned_cols=153 Identities=12% Similarity=0.109 Sum_probs=85.3
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCceeee
Q psy14815 101 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDEYECA 172 (479)
Q Consensus 101 ~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~ 172 (479)
++..++.|+.+ +.+.+||..++++.....+...... .+++...++..++.|+.++ .+.+||..+. .+..+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~-~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE-IFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT-EEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC-ceEEc
Confidence 66677777653 3688999999887665444322222 2333324788888887655 6899998875 23333
Q ss_pred ee---eeccccceeEEEEecC-CCEEEEEEc--C-----CcEEEEecCCccc----ceEeeeeec-CCCccEEEEEEccC
Q psy14815 173 AV---INAHIQDVKKVRFHPF-DNILASASY--D-----DTVKLFKEDKAEA----DWINFATLK-SHTSTVWSLAFDRI 236 (479)
Q Consensus 173 ~~---~~~~~~~v~~l~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~~----~~~~~~~~~-~~~~~v~~~~~~~~ 236 (479)
.. .........++.+..+ +++++.|+. + ..+.+||+.+..- .|..+.... ....... ++...+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~ 607 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITP 607 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEET
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCC
Confidence 22 1111222234566655 677788876 2 3588999886551 133333311 1111112 222333
Q ss_pred CCEEEEeeC--------CCeEEEEeccC
Q psy14815 237 GSRLATCSD--------DATVKIWKEYK 256 (479)
Q Consensus 237 ~~~l~s~~~--------dg~i~iwd~~~ 256 (479)
++.++.|+. ...+.+||+..
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 666677764 24588888743
No 345
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.46 E-value=3.5 Score=44.30 Aligned_cols=213 Identities=11% Similarity=0.105 Sum_probs=111.5
Q ss_pred cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC------CCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCC
Q psy14815 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC------GNFIASASF-DATTAVWDKRSGQFECNATLEGHEN 135 (479)
Q Consensus 63 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~ 135 (479)
.++.+.++.++. ...... ....-...|.|+++.|. +++++.|.. |++++|+++.+.+......+.. ..
T Consensus 530 ~g~~l~~fel~~--~~L~~~--~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~ 604 (1158)
T 3ei3_A 530 VGRALYYLQIHP--QELRQI--SHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EI 604 (1158)
T ss_dssp ETTEEEEEEEET--TEEEEE--EEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SC
T ss_pred ECCEEEEEEeeC--Cceeee--cccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CC
Confidence 356677766653 111111 11233568999999863 478999996 9999999998765443334432 12
Q ss_pred cEEEEEEcC--CCCEEEEEeCCCcEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 136 EVKSVTWSK--NGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 136 ~v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
...++.+.. ...+|..|-.||.+..+.+.... .....+...--..++.-..+...+..-+.+..+.-..+|.-+. .
T Consensus 605 ~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~-~ 683 (1158)
T 3ei3_A 605 IPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH-K 683 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSS-S
T ss_pred CCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCC-c
Confidence 344444432 34578899999998777765321 1111111111133444444444443333333444445554332 1
Q ss_pred cceEeeeeecCCCccE-EEEEEccC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 213 ADWINFATLKSHTSTV-WSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
. ....+.. ..+ ....|+.. .+-++..+ ++.++|..+.... . -.++++.- +..+..+
T Consensus 684 l---~~s~l~~--~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~------------~-~~~~~ipL--~~Tprri 742 (1158)
T 3ei3_A 684 L---VFSNVNL--KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQ------------K-LHIRTVPL--YESPRKI 742 (1158)
T ss_dssp E---EEEEBSS--SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSS------------S-EEEEEEEC--SSEEEEE
T ss_pred e---EEeccCh--HHhceEeccCcccCCCcEEEEc-CCceEEEEecccC------------C-eeEEEEeC--CCCceEE
Confidence 1 1222211 122 23345432 23344443 5569999874331 1 12333333 4578888
Q ss_pred EecCCCCeEEEEe
Q psy14815 290 SWCHLTDLIATAC 302 (479)
Q Consensus 290 ~~~~~~~~l~~~~ 302 (479)
+++|..+.++.+.
T Consensus 743 ~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 743 CYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEGGGTEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 8888877665554
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.31 E-value=1.5 Score=39.23 Aligned_cols=180 Identities=12% Similarity=0.089 Sum_probs=89.8
Q ss_pred eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC----CC-------cEEEEEeCCCCceeeeeeeeccccc
Q psy14815 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----DK-------SVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
.+..||..++++.. ..+..............++..++.|+. ++ .+..||..+. .+..+..+......
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSSCBCS
T ss_pred ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCccccc
Confidence 48999999998765 333322222223333457777888873 12 1677887764 23333222221111
Q ss_pred eeEEEEecCCCEEEEEEcC-------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC------CCe
Q psy14815 182 VKKVRFHPFDNILASASYD-------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD------DAT 248 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~ 248 (479)
...+.+ ++++++.|+.+ ..+.+||..+.+ |..+..+......-..+. .+++.++.|+. -..
T Consensus 103 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 176 (318)
T 2woz_A 103 FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNR 176 (318)
T ss_dssp CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCC
T ss_pred cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccce
Confidence 122222 57777888764 247788877543 444333322111112222 34666666653 235
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcccCCCC
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFKENPEA 316 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~~~~~~ 316 (479)
+.+||... ..|..+..+... ...-..+.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 177 ~~~yd~~~-------------~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 177 VFIYNPKK-------------GDWKDLAPMKTP-RSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEETTT-------------TEEEEECCCSSC-CBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEcCCC-------------CEEEECCCCCCC-cccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 78888643 234433322221 111112222 56677777643 356778877654
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.21 E-value=2.4 Score=40.88 Aligned_cols=115 Identities=12% Similarity=0.003 Sum_probs=69.7
Q ss_pred ceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc---------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 181 DVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA---------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
....+..+|+|+++++++ .+.++.++|+++... .-....+.. -.......+|+++|.-..|.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 345788999999888776 578899999985321 001122222 334567889999996666677899999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe------cCCCCeEEEEeC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW------CHLTDLIATACG 303 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~------~~~~~~l~~~~~ 303 (479)
-|++........ .+.....+..+..| -. +-.+.- .++|++|++.+.
T Consensus 403 kWni~~a~~~~~-----g~~~~~v~~k~dv~-Yq-pGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 403 KWNMEEAVRAYK-----GEKVNYIKQKLDVH-YQ-PGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEHHHHHHHHT-----TCCCCCEEEEEECS-SC-EEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEeccHHHHHhc-----CccCCeeeeccccc-cC-CcccccCCCccCCCCccEEEEecc
Confidence 999864310000 01122445556554 22 222222 468889888754
No 348
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.19 E-value=5 Score=39.94 Aligned_cols=200 Identities=11% Similarity=0.040 Sum_probs=118.7
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCCCCEEE-EEeCCCcEEEEE
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKNGQFLA-TCSRDKSVWVWE 162 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd 162 (479)
..+.+++|.+.+..|+.+. ..+.|..+++...... ..+.. ....+..+++...++.|+ +-+..+.|.+.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~--~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGF--TVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCce--EEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEE
Confidence 5678899988666665554 4678888887654311 11221 234678999998766555 445677899999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+... .....+.......++|++.| .|.++++-.... .|...+++.... ..+ ....-...+.+++++.++.
T Consensus 418 ~~G~---~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~--~~l--~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 418 LDGR---SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER--EVL--FFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp TTSC---EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC--EEE--ECSSCSCEEEEEEETTTTE
T ss_pred CCCC---eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc--EEE--EeccCCCccEEEEeCCCCE
Confidence 8754 11122223345678999999 555555543333 566666664332 111 1222345789999998877
Q ss_pred EEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 240 LATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|+.+.. .+.|...++..... ..+..........++... +.++.+-...+.|...|..+++
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r----------------~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANR----------------IVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGRE 551 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC----------------EEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSS
T ss_pred EEEEeCCCCEEEEEeCCCCce----------------EEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCC
Confidence 776654 57788888733211 122211133456777654 4455555556777777776655
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.09 E-value=3 Score=37.07 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=94.0
Q ss_pred EECCCCCEEEEEECC--------------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCc--E
Q psy14815 97 AWSPCGNFIASASFD--------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--RDKS--V 158 (479)
Q Consensus 97 ~~~~~~~~l~t~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~--i 158 (479)
-+++++.+|+.+... ..|+..++..++... +.. .. +..|+++++.|+-.. .++. |
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~---l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV---LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE---EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE---eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 346778887777543 367778887765322 221 11 236777888888776 3444 4
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
...++.... ...+..+.. ..++++++.|.-.+. ...|...++..... +.+ .. +... ..+.|++
T Consensus 132 y~~~~dGs~----~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--~~l--~~---~~~~-~~~~P~g 195 (302)
T 3s25_A 132 YRIRIDGEE----KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--ALF--YD---CNCY-KPVVLDD 195 (302)
T ss_dssp EEEETTSCC----CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE--EEE--EC---SCEE-EEEEEET
T ss_pred EEEECCCCC----eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE--EEE--eC---CCcc-ceeeecC
Confidence 444554432 222333222 456777877776654 56788888775542 112 22 1222 2356888
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC--CCeEEEcccCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPE 315 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--dg~i~vw~~~~~ 315 (479)
++|+-....+.-+|+.+...... ...+.. ..+ ..|+|++++|.-++. .+.|..-+++..
T Consensus 196 ~~iy~t~~~~~~~I~~~~ldG~~--------------~~~Lt~---~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVHVNINNPN--------------PVVLTE---ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TEEEEEEGGGTTEEEEECSSSCC--------------CEECSC---SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CEEEEEEcCCCcEEEEEECCCCC--------------eEEEeC---CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 88876654432344443222211 111211 122 236778887776532 355666666554
Q ss_pred C
Q psy14815 316 A 316 (479)
Q Consensus 316 ~ 316 (479)
.
T Consensus 257 ~ 257 (302)
T 3s25_A 257 G 257 (302)
T ss_dssp C
T ss_pred c
Confidence 3
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.66 E-value=1.2 Score=40.34 Aligned_cols=187 Identities=7% Similarity=-0.019 Sum_probs=93.8
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCC---C----------ccceEEEe--ecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGL---P----------VETSLRQL--VEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---~----------~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.+++.++.||.|.-.|.++|+...++... + .+..++.. ..+|.+..++.......+.... ...-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~-~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSI-RQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEH-HHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecc-ccce
Confidence 36777888888888888887776655432 1 01133333 4789998888764311111110 0001
Q ss_pred cCCcEEE---EEE-----CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC--Cc-----EEEEEEc-----CCCCE
Q psy14815 89 HQRTIRE---TAW-----SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE--NE-----VKSVTWS-----KNGQF 148 (479)
Q Consensus 89 ~~~~v~~---v~~-----~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~-----v~~l~~~-----~~~~~ 148 (479)
...++.. ..+ ...+..+++|+.+|.+...|+.+|+ .+..+.... .. ..|.... ..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~--~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE--IISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC--EEEEESTTCBCC--------------------CCE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc--EEEEEecCCCcccccccccccccccccccccCCCe
Confidence 1222221 000 0135688999999999999999997 445544221 10 0111110 12356
Q ss_pred EEEEeCCCcEEEEEeCCCCceeee-eeeecccc--ce-eEEEEecCCCEEEEEEcCCcEEEEecCCcccce
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECA-AVINAHIQ--DV-KKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~--~v-~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
++.+..+..+.+.+ ++++.+... ........ ++ .+-..+.++.+ +.++.||.|..+|..++...|
T Consensus 168 v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777666666666 333211110 00000000 00 00001123555 557889999999988777544
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.30 E-value=0.54 Score=42.55 Aligned_cols=111 Identities=9% Similarity=0.014 Sum_probs=64.1
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEc--CCCCEEEEE--eCCCcEEEEEeCCCCceeeeeeeec
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWS--KNGQFLATC--SRDKSVWVWEVGEEDEYECAAVINA 177 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~ 177 (479)
..++.++.||.|.-.|..+|+ ....++.. ..++....-. +.+..++.+ +.||.+..++..++...... ....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~--~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~-~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGH--IIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL-SIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTE--EEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-EHHH
T ss_pred CEEEEEeCCCeEEEEECCCCc--EEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-cccc
Confidence 478899999999999999997 44555432 1222221100 112234433 58999999998776321111 1100
Q ss_pred --cccceeE---EEE-e----cCCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 178 --HIQDVKK---VRF-H----PFDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 178 --~~~~v~~---l~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
...++.. ... . ..+..+++|+.+|.+...|.++++..|.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 1111211 000 0 1356789999999999999999886443
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.38 E-value=5.6 Score=35.27 Aligned_cols=173 Identities=6% Similarity=-0.002 Sum_probs=90.6
Q ss_pred CCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------------CcEEEEEe
Q psy14815 100 PCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--------------KSVWVWEV 163 (479)
Q Consensus 100 ~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------g~i~vwd~ 163 (479)
+++..++.... ++.|...+........+.. . .+-.+++++.+|+-+... ..|+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-----~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-----D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-----E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccC-----C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 45666666542 4666666765544222221 1 133457788887777543 35666677
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEE--cC--CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS--YD--DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
...+. .. +.. . .+..|+++++.|+-.. .+ ..|...++..... ..+..+.. ..++++++.
T Consensus 96 dg~~~-~~---l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-----~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 96 NGHGS-TV---LDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-----KKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp TSCCC-EE---EEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-----EEEESSCC----CCSEEETTE
T ss_pred CCCcc-eE---eec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-----EEEeCCCc----eEeeEECCE
Confidence 66532 11 211 1 1236778888888776 23 3455555554332 22222322 346778888
Q ss_pred EEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC--CeEEEcccCCCC
Q psy14815 240 LATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD--DAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d--g~i~vw~~~~~~ 316 (479)
|+-.+. ...|..-++.... ....+.+ ... ..+.|++.+|+-...+ ..|..-+++...
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~---------------~~~l~~~----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQS---------------EALFYDC----NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EEEECTTTCCEEEEETTTTE---------------EEEEECS----CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred EEEEeCCCceEEEEECCCCC---------------EEEEeCC----Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 875554 4566666653221 1111222 122 2356888888776544 355555555544
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.65 E-value=7.8 Score=36.79 Aligned_cols=111 Identities=15% Similarity=0.069 Sum_probs=62.1
Q ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEEeCCCCceeeeeee----e-----ccccceeEEEEecC----CCEEEEEEcC-
Q psy14815 136 EVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVI----N-----AHIQDVKKVRFHPF----DNILASASYD- 200 (479)
Q Consensus 136 ~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~-----~~~~~v~~l~~~~~----~~~l~~~~~d- 200 (479)
....|+|.|++. .|+++...|.|++++.........+..+ . ........|+|+|+ +.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 467999999996 5667778999999975432111111111 1 11346788999996 4444443321
Q ss_pred -----------CcEEEEecCCcc------cceEeeeeec--CCCccEEEEEEccCCCEEEEeeCC
Q psy14815 201 -----------DTVKLFKEDKAE------ADWINFATLK--SHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 201 -----------g~i~i~d~~~~~------~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
..|.-|.+.... ...+.+..+. ........|+|.|||.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 134446554210 0112222221 222346789999999877765543
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.30 E-value=23 Score=33.56 Aligned_cols=29 Identities=3% Similarity=0.038 Sum_probs=22.4
Q ss_pred cceEEEEECCCCC-eEEEeeCCCcEEEEec
Q psy14815 12 GRVWNVSWNPQGT-MISSCGEDKNIRLWVM 40 (479)
Q Consensus 12 ~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~ 40 (479)
..-+.|+|.|+|. .|+.+...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 4567899999996 4555667899999964
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=83.52 E-value=36 Score=34.84 Aligned_cols=155 Identities=10% Similarity=0.122 Sum_probs=83.7
Q ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeC----CCCcEEEEEEcCC-CCEEEEEeCCCc----EE
Q psy14815 90 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEG----HENEVKSVTWSKN-GQFLATCSRDKS----VW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~~~~-~~~l~~~~~dg~----i~ 159 (479)
...|.+|+++|. ...++.++..+.|...+=....+..+..... ....+.++++.|. ...++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999995 4566777777777666644444443221010 1246999999983 345555543211 33
Q ss_pred EEEe-CCCCceeeeeeeec------cccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec---CCCccE
Q psy14815 160 VWEV-GEEDEYECAAVINA------HIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK---SHTSTV 228 (479)
Q Consensus 160 vwd~-~~~~~~~~~~~~~~------~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~v 228 (479)
||.- ..++.++.+..-.. ....+..++++|. .+.+..+...+. +|--..+...|..+.... .....+
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCCe
Confidence 4433 44444444322100 0113567888884 355666654443 343333334566554322 112457
Q ss_pred EEEEEccC-CCEEEEeeCC
Q psy14815 229 WSLAFDRI-GSRLATCSDD 246 (479)
Q Consensus 229 ~~~~~~~~-~~~l~s~~~d 246 (479)
..+.++|. +..++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88999884 4466666554
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.51 E-value=27 Score=32.03 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=77.2
Q ss_pred CCcEEEEEECC-CCCEEEEEECCC----eEEEEECCCCeEEEeEE---EeC--------CCCcEEEEEEcC-C-CCEEEE
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDA----TTAVWDKRSGQFECNAT---LEG--------HENEVKSVTWSK-N-GQFLAT 151 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg----~i~iwd~~~~~~~~~~~---~~~--------~~~~v~~l~~~~-~-~~~l~~ 151 (479)
...|.+|++.| +...+..++..| .|...+-....+..... +.. ....|.++++.| + ...+++
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 45799999998 333444454444 44443322222222211 111 112577899987 2 556676
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeee----------------ccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVIN----------------AHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~----------------~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
+...+.|...+ ..++.++.+.... .....+.+|.++|. ...+..+..++.|... ..+...
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG~t 210 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES--TDAGTD 210 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE--SSTTSS
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE--CCCCCC
Confidence 66666544332 2233333332111 11235788999883 4455666555544433 222234
Q ss_pred eEeeee-ecC-C--------CccEEEEEEccC-CCEEEEeeCCC
Q psy14815 215 WINFAT-LKS-H--------TSTVWSLAFDRI-GSRLATCSDDA 247 (479)
Q Consensus 215 ~~~~~~-~~~-~--------~~~v~~~~~~~~-~~~l~s~~~dg 247 (479)
|..+.. ... + ...+.++.++|. ...|+.+...+
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 443321 110 0 134889999986 35676666544
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.45 E-value=11 Score=36.50 Aligned_cols=107 Identities=13% Similarity=0.089 Sum_probs=66.1
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCCCc-----e----ee-eeeeeccccceeEEEEecCCCEEEEEEcCCcEE
Q psy14815 136 EVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDE-----Y----EC-AAVINAHIQDVKKVRFHPFDNILASASYDDTVK 204 (479)
Q Consensus 136 ~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~-----~----~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 204 (479)
....+..+|||+++++++. +.++.++|++.... + .. ..... -.......+|.++|+-..+-.-|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 3457889999999888765 77899999974210 0 00 11111 233456789999996666666899999
Q ss_pred EEecCCc------ccceEeeeeecCCCccEEEEEE------ccCCCEEEEee
Q psy14815 205 LFKEDKA------EADWINFATLKSHTSTVWSLAF------DRIGSRLATCS 244 (479)
Q Consensus 205 i~d~~~~------~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~ 244 (479)
-|++... +.....+..+.-|.. +-.+.- .++|++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 9998753 111123334443433 222322 46788888765
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=77.29 E-value=36 Score=29.56 Aligned_cols=209 Identities=9% Similarity=-0.057 Sum_probs=112.9
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEE---ECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVW---DKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iw---d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+.+..+.-.....+|+.-+.+|.++-- ++.......+ +. ....|..+.... +...++..+.+|.++...+..
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 3455555554455566666777866643 3333321122 33 345566664422 467899999999999998865
Q ss_pred CCc---eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-----ceEeeeeecCCCccEEEEEEccCC
Q psy14815 166 EDE---YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-----DWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 166 ~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
-.. -.....+.. ...+..+........++..+..|.+..++...-.. .......+.. ...|..+...+++
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~ 177 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE 177 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC
Confidence 420 011111222 23444454444556788889999988887542111 1112223333 3556666555567
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE--cccC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI--FKEN 313 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v--w~~~ 313 (479)
..++..+..|.++...+..-.... +..+-+..+. ....+..+....+...++..+.+|.+.. ++..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~--------R~gkGv~~i~--~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTN--------RGVKGTEVSG--TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCC--------TTCCCEECCC--SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCC--------CCCcceEEEc--CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 788999999999999875433221 1111122221 1333444433333345555666777666 6543
No 359
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=76.98 E-value=2.5 Score=36.07 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=57.6
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEec----CCHHHHHHHHHcCCCEEEEeCCCCcccccc
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTID----LTDEVLKEAVENGTDLIIAYHPPIFAPLKR 430 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d----~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~ 430 (479)
.++.+++..++++.....+.. +.-+.++.. ++.++++.+... -....+++|.+.|+|++||=|+
T Consensus 162 ~t~~dvi~~L~~ipEy~~a~~--~p~I~~g~~--~~~vgkIaV~~GgGtsG~~~~i~~a~~~GvDt~ITGe~-------- 229 (278)
T 3rxy_A 162 ARVQDAIDALMTLPEFAGAAT--RIMVPVGAV--DQPLGKIAVVHGAGTNGGYAVARAYFDHGVRTVLYIHI-------- 229 (278)
T ss_dssp CBHHHHHHHHTTSHHHHSCSS--CCEEEESCT--TSBCCSEEECCSSSSCCHHHHHHHHHHTTCCEEEESCC--------
T ss_pred chHHHHHHHHHhCchhhhcCC--CCEEEeCCC--CCcCCEEEEEcCCCCCCcHHHHHHHHHcCCCEEEEecC--------
Confidence 456777777766543333322 556666555 488999988777 6678899999999999999662
Q ss_pred cCcCChhhHHH-HHHHhcCceEEec-ccc
Q psy14815 431 VTNDKWKERVV-STCLAHNIAVYSP-HTT 457 (479)
Q Consensus 431 ~~~~~~~~~~~-~~~~~~~~~~~~~-h~~ 457 (479)
..... ....+++|+|+++ |-+
T Consensus 230 ------~~~~~~~~A~E~ginVI~AGHyA 252 (278)
T 3rxy_A 230 ------APEEAERLRREGGGNLIVTGHIA 252 (278)
T ss_dssp ------CHHHHHHHHHHCSSEEEECCHHH
T ss_pred ------chHHHHHHHHHcCCeEEEeccch
Confidence 12333 5566779988764 544
No 360
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=76.75 E-value=41 Score=29.99 Aligned_cols=233 Identities=9% Similarity=0.036 Sum_probs=120.9
Q ss_pred CCCCeEEEeeCCCcEEEEecccccc--c--ccccC---------CCccceEEEeecCCcEE---EecCCCCCCceeee--
Q psy14815 21 PQGTMISSCGEDKNIRLWVMVIREP--Y--EKLHG---------LPVETSLRQLVEDKNIR---LWGKESFGNKFTAK-- 82 (479)
Q Consensus 21 ~~~~~l~t~~~dg~v~iwd~~~~~~--~--~~~~~---------~~~~~~~~~~~~~~~i~---~w~~~~~~~~~~~~-- 82 (479)
|+..++++.+.+|.|+--.+...+. . ..+.. ......++.+++.|.+. ++++...+......
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 5667788888888888765442211 0 01111 12234455566666533 34444333221111
Q ss_pred -EEeccccCCcEEEE-EECC--CCCEEEEEECCCeEEEEECCC------CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 83 -AILSDGHQRTIRET-AWSP--CGNFIASASFDATTAVWDKRS------GQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 83 -~~~~~~~~~~v~~v-~~~~--~~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..+.......|.++ ...+ ++.+++.++.+|.++--.+.. ++-.....+... +.+..+........++..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Confidence 11112234456654 3332 356899999999999987631 111122233332 556565555556678888
Q ss_pred eCCCcEEEEEeCCCCcee------eeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcc------cceEeee
Q psy14815 153 SRDKSVWVWEVGEEDEYE------CAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAE------ADWINFA 219 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~------~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~------~~~~~~~ 219 (479)
+.+|.+..++...-.... ....+. ....|.++...+++. .+++.+..|..+..++..-. .....+.
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~ 240 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR 240 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence 899999888875421110 111122 223455554444444 78888889988887765311 0011111
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
.+......+..+....++..++..+.+|.+....+.
T Consensus 241 ~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 241 ELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp CCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred ecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 222222245433333334566677778877666654
No 361
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=76.70 E-value=40 Score=29.80 Aligned_cols=234 Identities=8% Similarity=-0.035 Sum_probs=120.7
Q ss_pred CCCCeEEEeeCCCcEEEEecccccc-------cccc--c---------CCCccceEEEeecCCcEE---EecCCCCCCce
Q psy14815 21 PQGTMISSCGEDKNIRLWVMVIREP-------YEKL--H---------GLPVETSLRQLVEDKNIR---LWGKESFGNKF 79 (479)
Q Consensus 21 ~~~~~l~t~~~dg~v~iwd~~~~~~-------~~~~--~---------~~~~~~~~~~~~~~~~i~---~w~~~~~~~~~ 79 (479)
|+..++++.+.+|.|+--.+...+. +..+ . .......++.+++.|.+. ++++...+...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 3455677777788776655432111 0000 0 012234455556666533 34444333221
Q ss_pred eeeE---EeccccCCcEEEEEEC---CCCCEEEEEECCCeEEEEECCC---C--eEEEeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 80 TAKA---ILSDGHQRTIRETAWS---PCGNFIASASFDATTAVWDKRS---G--QFECNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 80 ~~~~---~~~~~~~~~v~~v~~~---~~~~~l~t~~~dg~i~iwd~~~---~--~~~~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
.... .+.......|.++..- .++.+++..+.+|.++--.+.. . +-.....+... +.+..+....+...
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 2221 1112334556665442 3566899999999999887631 1 11122233433 55555555555567
Q ss_pred EEEEeCCCcEEEEEeCCCCcee------eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-----ceEe
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYE------CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-----DWIN 217 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~ 217 (479)
++..+.+|.+..++...-.... ....+. ....|-++...+++..+++.+..|.++-.++..-.. ....
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 8888899998888875432110 011122 233455555445556788889999988887742110 0111
Q ss_pred eeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
...+....+.+..+....+...++..+.+|.+.-++...
T Consensus 239 ~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 239 SIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred eeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 222332334554544433445666777788777666543
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.44 E-value=38 Score=29.44 Aligned_cols=184 Identities=12% Similarity=0.097 Sum_probs=96.2
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
..|..++...+- .++. . ||.|..|-.... +.-. ...-...|..++...+ ..+.-. +|.|..|-.....+.
T Consensus 63 ~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~---P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gql 133 (282)
T 3qhy_B 63 SGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV---PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQT 133 (282)
T ss_dssp SCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC---CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTT
T ss_pred CCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC---CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcC
Confidence 356666665432 3333 4 899999975432 2100 0011246777776544 333334 899999987654322
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
. ........|..++...+ ..+.-. ||.|..|-.........+ ..-...|..++-..+ +.+.- .||.|
T Consensus 134 g---~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~G~~--hs~al-~~G~v 200 (282)
T 3qhy_B 134 T---VPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVP----AEAQSGVDDVAGGIF--HSLAL-KDGKV 200 (282)
T ss_dssp S---CCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCC----GGGGSSEEEEEECSS--EEEEE-ETTEE
T ss_pred C---CCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCc----eecCCCeEEEEecCC--EEEEE-ECCeE
Confidence 1 11122345666665432 222233 799999976543321111 111345777776543 33333 59999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+.|-.....+.. ++. .....|..++-.....+++ . ||.++.|=....
T Consensus 201 ~~wG~n~~gqlg-~p~---------------~~~~~v~~i~~G~~h~~al-~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 201 IAWGDNRYKQTT-VPT---------------EALSGVSAIASGEWYSLAL-K--NGKVIAWGSSRT 247 (282)
T ss_dssp EEEECCTTSTTC-CCG---------------GGGSSCCEEEECSSCEEEE-E--TTEEEEESTTCC
T ss_pred EEEECCCCCCCC-CCc---------------ccCCCceEEEcCCCEEEEE-E--CCEEEEecCCCC
Confidence 999765443331 110 0123466666544433333 3 899999966544
No 363
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=74.65 E-value=76 Score=32.09 Aligned_cols=165 Identities=10% Similarity=0.100 Sum_probs=86.4
Q ss_pred CcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeC----CCCcEEEEEEcC-CCCEEEEEeCC-------Cc
Q psy14815 91 RTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEG----HENEVKSVTWSK-NGQFLATCSRD-------KS 157 (479)
Q Consensus 91 ~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~~~-~~~~l~~~~~d-------g~ 157 (479)
..|..|+++|.. ..++.+...+.|...+-....+..+..... ....|.+|+++| +.+.++++... +.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 389999999963 556667666777777655555443221111 023589999998 44555555421 12
Q ss_pred EEEEEeC-CCCceeeeeee-e--cc---ccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCC-----
Q psy14815 158 VWVWEVG-EEDEYECAAVI-N--AH---IQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSH----- 224 (479)
Q Consensus 158 i~vwd~~-~~~~~~~~~~~-~--~~---~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----- 224 (479)
..+|.-. .++.++.+..- . .+ ...+..++++|. .+.+..+...|. -+|--..+...|..+..+..+
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~ 181 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYIY 181 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCBS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCccccc
Confidence 4455544 34444443221 0 00 112467999984 456666653321 234333333355544432221
Q ss_pred ---------CccEEEEEEccCC-------CEEEEeeCCCeEEEEeccC
Q psy14815 225 ---------TSTVWSLAFDRIG-------SRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 225 ---------~~~v~~~~~~~~~-------~~l~s~~~dg~i~iwd~~~ 256 (479)
...+..+.++|.. ..++.+..++.-.+|.-..
T Consensus 182 ~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~D 229 (737)
T 2cn3_A 182 DPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTD 229 (737)
T ss_dssp CTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESS
T ss_pred CcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcC
Confidence 2347788888743 2566665554323454433
No 364
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.62 E-value=76 Score=32.08 Aligned_cols=224 Identities=11% Similarity=0.102 Sum_probs=119.4
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...|.++....+| .|..|+.+| +..||..+..........+ ....+..+.. +.+..++... ......
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~-~Gl~~~~~~~--~~~~~~ 136 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGAL-NGLYTYQLQS--RKLTSF 136 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEET-TEEEEEETTT--CCEEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcC-CcceeEeCCC--CeEEEe
Confidence 3568888877766 455566665 7889876653222100000 0111222222 2455555442 111111
Q ss_pred EE-eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC----CCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 83 AI-LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 83 ~~-~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
.. ...-....|.++....++.+.+ |+.+ -+..++..+++.... ..... ...|.++...+++..|..|+. +-
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEe-cCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 00 0011235688888887776555 5544 588889887753221 11111 234888888777776666664 45
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-----cCCCccEEEEE
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-----KSHTSTVWSLA 232 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~~v~~~~ 232 (479)
+..+|..+.. ......+ ....|.++...+++.+. .|+.+ -+.+++..+... ...... .-....|.++.
T Consensus 213 l~~~~~~~~~-~~~~~~l--~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~ 285 (758)
T 3ott_A 213 LFQYFPSTGQ-IKQTEAF--HNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTPL--QHIIHDSRNIQSLTNNIIWNIF 285 (758)
T ss_dssp EEEEETTTTE-EEEEEEE--EEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSCC--EEECCCTTCTTSCSCSCEEEEE
T ss_pred CeEEcCCCCe-EEeccCC--CCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCcE--EEEEcCCCCcCcCCcCeEEEEE
Confidence 7778876542 1222222 23458888888777654 45544 578888765432 111110 01234688998
Q ss_pred EccCCCEEEEeeCCCeEEEE
Q psy14815 233 FDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iw 252 (479)
...+|.. ..|+..| +.++
T Consensus 286 ~D~~g~l-WiGT~~G-l~~~ 303 (758)
T 3ott_A 286 ADQEHNI-WLGTDYG-ISLS 303 (758)
T ss_dssp ECTTCCE-EEEESSS-EEEE
T ss_pred EcCCCCE-EEEeCCc-cccc
Confidence 8887764 4555566 5444
No 365
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=71.62 E-value=16 Score=31.57 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=42.4
Q ss_pred cccHHHHHHHHHHhCCCccCCCCCcceeeecc---CCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEE
Q psy14815 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEP---HNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIA 419 (479)
Q Consensus 354 ~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~---~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~ 419 (479)
.+...++...+.+..+.. ++.+.. .+..+.|+++.+|---....+++|.+.|||+.||
T Consensus 144 ~~t~~el~~~vk~~l~~~--------~vr~~~~~~g~~~~~I~rVAv~~GsG~~~~~~a~~~gaD~~IT 204 (267)
T 2fyw_A 144 PQTFWELAQQVKQVFDLD--------SLRMVHYQEDDLQKPISRVAICGGSGQSFYKDALAKGADVYIT 204 (267)
T ss_dssp EEEHHHHHHHHHHHTTCS--------CCEEECSCTTGGGSEEEEEEEESSSCGGGHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHcCCC--------eEEEEeccCCCCCCceeEEEEEcCCCHHHHHHHHHcCCCEEEE
Confidence 456788888887765421 233310 1223579999999999999999999999999988
No 366
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.27 E-value=63 Score=33.89 Aligned_cols=37 Identities=22% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 126 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~ 126 (479)
...+.+++..++..++++-+.|+++|+|++.++++..
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 3467788888888999999999999999999997443
No 367
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.95 E-value=91 Score=31.37 Aligned_cols=208 Identities=12% Similarity=0.066 Sum_probs=100.6
Q ss_pred cEEEEE-ECCCCCEEEEEEC-C----CeEEEEECCCCeEEEeEEEe-CCCC------cEEEEEEcCCCCEEEEEeC----
Q psy14815 92 TIRETA-WSPCGNFIASASF-D----ATTAVWDKRSGQFECNATLE-GHEN------EVKSVTWSKNGQFLATCSR---- 154 (479)
Q Consensus 92 ~v~~v~-~~~~~~~l~t~~~-d----g~i~iwd~~~~~~~~~~~~~-~~~~------~v~~l~~~~~~~~l~~~~~---- 154 (479)
....+. ++|++++++.+-. . ..++++|+.+++... ..+. .-+. ....++|.. ...++.+..
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~-~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK-NGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKN 207 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT-TCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTT
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC-CCcccccccccccccccceeeEEC-CCEEEEEeCCCCC
Confidence 344555 8899988766532 2 389999999997331 1111 0000 113447874 344444321
Q ss_pred -------CCcEEEEEeCCCCceeeeeeeeccccce-eEEEEecCCC-----EEEEEEcC---CcEEEEecCCcccceEee
Q psy14815 155 -------DKSVWVWEVGEEDEYECAAVINAHIQDV-KKVRFHPFDN-----ILASASYD---DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 155 -------dg~i~vwd~~~~~~~~~~~~~~~~~~~v-~~l~~~~~~~-----~l~~~~~d---g~i~i~d~~~~~~~~~~~ 218 (479)
...|+.|.+-+... .-...+......+ .+...+++++ .+++.+.+ ..+.+.|.......+..
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK- 285 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-
T ss_pred CcCcCCCCCEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-
Confidence 24578887766422 1122233222222 2334455555 24443322 34566666543322122
Q ss_pred eeecCCCccEEEEEEccCCCEEEEe----------eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATC----------SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (479)
+...... .+..+.++.+++.. ...+.|...++..+.... .....++.+ +.......+..
T Consensus 286 --l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~l~~ 354 (711)
T 4hvt_A 286 --INMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTE-----SDKTSLKIL--FTPTANEVFNF 354 (711)
T ss_dssp --CCSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCG-----GGCTTCEEE--ECCCTTEEEEE
T ss_pred --eecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccc-----cccccceEE--ECCCCCCeEEE
Confidence 2111111 12334455444422 246678888886532100 000122222 22223557888
Q ss_pred EEecCCCCeEEEEeCCCe--EEEcccCCC
Q psy14815 289 ISWCHLTDLIATACGDDA--IRIFKENPE 315 (479)
Q Consensus 289 l~~~~~~~~l~~~~~dg~--i~vw~~~~~ 315 (479)
+.|..+ .++++...++. +.++++.++
T Consensus 355 ~~~~~~-~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 355 ISTTKD-RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp EEECSS-CEEEEEEETTEEEEEEECEETT
T ss_pred EEEECC-EEEEEEEECCEEEEEEEECCCC
Confidence 999876 56777777765 566666544
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=68.96 E-value=62 Score=28.62 Aligned_cols=204 Identities=9% Similarity=0.039 Sum_probs=114.5
Q ss_pred CCCCEEEEEECCCeEEEEECCCCe-------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee--
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQ-------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE-- 170 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-- 170 (479)
++..++++.+.+|.|+--.+..-+ -.....++. .+.+..+........++..+..|.++-+....-....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456788899999999887653221 011112232 2345555555556678888899998877765321100
Q ss_pred -------eeeeeeccccceeEEEEec---CCCEEEEEEcCCcEEEEecCCccc---ceEeeeeecCCCccEEEEEEccCC
Q psy14815 171 -------CAAVINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKEDKAEA---DWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 171 -------~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
....+.. ...|.++...+ +...++..+..|.++...+..-.. .......+.. ...+..+.....+
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 0111222 22344443322 456788899999999888753221 1122333444 4556666555556
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
..++..+.+|.+..+....-.... ....+.....+.. +..|.++..-.++..+++.+..|..+...+..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~g------R~~~Gv~~i~L~~--~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTN------RGTQGVCGMKLKE--GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCC------TTBCCEECCCCCT--TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccC------CCCCCeEeEEeCC--CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 778889999999999875421110 0112222222322 44566665555566788888899988877643
No 369
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.29 E-value=22 Score=37.31 Aligned_cols=38 Identities=5% Similarity=0.093 Sum_probs=32.9
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL 49 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~ 49 (479)
..|.+++..++..+++|-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35778888888899999999999999999999887654
No 370
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=67.59 E-value=75 Score=29.06 Aligned_cols=178 Identities=11% Similarity=0.085 Sum_probs=97.0
Q ss_pred CeEEEEECCCC--eEEEeEEEeC----CCCcEEEEEEc---CC----CCEEEEEe-CCCcEEEEEeCCCCceeeeeee--
Q psy14815 112 ATTAVWDKRSG--QFECNATLEG----HENEVKSVTWS---KN----GQFLATCS-RDKSVWVWEVGEEDEYECAAVI-- 175 (479)
Q Consensus 112 g~i~iwd~~~~--~~~~~~~~~~----~~~~v~~l~~~---~~----~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~-- 175 (479)
-+|.+||+.++ +......+.. ....+..+.+. ++ +.+++.+. ..+-|.++|+.+++.++.....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36889999998 7544444432 23457788887 22 34455544 3567999999988655443210
Q ss_pred ---------ecc----ccceeEEEEecC----CCEEEEEEcCCcEEEEecC-----CcccceEeeeee--cCCCccEEEE
Q psy14815 176 ---------NAH----IQDVKKVRFHPF----DNILASASYDDTVKLFKED-----KAEADWINFATL--KSHTSTVWSL 231 (479)
Q Consensus 176 ---------~~~----~~~v~~l~~~~~----~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~--~~~~~~v~~~ 231 (479)
.+. ...+..++++|+ ++.|....-.+. ++|.+. .... ...+..+ ++..+.-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~-~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGG-KLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTC-CCCCEEEEECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcch-hhceEEeeecCCCCCcceE
Confidence 010 135778888887 666666654442 333332 1110 0111111 1112344456
Q ss_pred EEc-cCCCEEEEeeCCCeEEEEeccC-CCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 232 AFD-RIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 232 ~~~-~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+++ .+|..+++--....|..|+... .-.. .....+.. ...-..+..+.+.++|.+.+.++
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~---------~n~~~l~~--d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRM---------KNTDVVYT--SSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCG---------GGEEEEEE--CTTCCSEEEEEECTTSCEEEEEC
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCcccc---------CceEEEEE--CCCccccCeEEECCCCeEEEEEC
Confidence 775 6777777777888999999754 2111 11122221 11234567777777776655554
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.41 E-value=69 Score=28.57 Aligned_cols=166 Identities=8% Similarity=-0.050 Sum_probs=97.2
Q ss_pred cCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 89 HQRTIRETAWSP---CGNFIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 89 ~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
....|.++..-+ +..++++.+.+|.++--.+..-. -.....++. .+.+..+........++..+..|.+..
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 345566554433 57899999999999988764311 012223443 345555555555667888889999988
Q ss_pred EEeC--CCCcee------eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-----ceEeeeeecCCCcc
Q psy14815 161 WEVG--EEDEYE------CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-----DWINFATLKSHTST 227 (479)
Q Consensus 161 wd~~--~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~ 227 (479)
+... .-.... ....+. ....|.++...+++..++..+..|.++.-.+..-.. .......+..-...
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~ 250 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGR 250 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCS
T ss_pred EECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCe
Confidence 8877 321100 011122 234466666555667899999999998887643211 01111222222334
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
+..+....+...++..+.+|.+.-++...
T Consensus 251 lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 251 LVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 55554444556777788888888887643
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=63.89 E-value=78 Score=27.95 Aligned_cols=164 Identities=12% Similarity=0.039 Sum_probs=94.0
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC---CCeEEE-------eEEEeCCCCcEEEEEEcC---CCCEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKR---SGQFEC-------NATLEGHENEVKSVTWSK---NGQFLATCSRDK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~---~~~~~~-------~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg 156 (479)
.+.+..+........++..+..|.++-.... ...... ...+.. ...|.++...+ +..+++..+.+|
T Consensus 46 ~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G 124 (312)
T 1suu_A 46 GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASG 124 (312)
T ss_dssp TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTS
T ss_pred CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCC
Confidence 3445555555555677777888887766542 211000 112222 23455554332 456788899999
Q ss_pred cEEEEEeCCCCce----eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-----cceEeeeeecCCCcc
Q psy14815 157 SVWVWEVGEEDEY----ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-----ADWINFATLKSHTST 227 (479)
Q Consensus 157 ~i~vwd~~~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~ 227 (479)
.++...+...... .....+.. ...+-.+.....+..++..+.+|.+..+....-. ........+.. ...
T Consensus 125 ~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~ 202 (312)
T 1suu_A 125 KIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDL 202 (312)
T ss_dssp EEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCC
T ss_pred eEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCE
Confidence 9999887543211 11122333 3445555554455678889999999998875311 11122223332 345
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
|..+..-.++..+++.+..|..+..++..
T Consensus 203 vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 203 FVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 66665555567788999999999998754
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.44 E-value=89 Score=28.45 Aligned_cols=145 Identities=10% Similarity=0.035 Sum_probs=74.2
Q ss_pred CCEEEEEECCCeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC----cEEEEEeCCCCceeeeee
Q psy14815 102 GNFIASASFDATTAVWDKRS--GQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDK----SVWVWEVGEEDEYECAAV 174 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~ 174 (479)
...|..|+..| +.+++... ..+..... ......|.+|.+.| +...+.+++..| .|.. ....+..+..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~-s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFR-SDDGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEE-ESSTTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEE-eCCCCCCceECCc
Confidence 34677787776 55555432 34433221 12345799999998 344455555554 3332 2233333333321
Q ss_pred ---eec--------cccceeEEEEec-C-CCEEEEEEcCCcEEEEecCCcccceEeeeeec----------------CCC
Q psy14815 175 ---INA--------HIQDVKKVRFHP-F-DNILASASYDDTVKLFKEDKAEADWINFATLK----------------SHT 225 (479)
Q Consensus 175 ---~~~--------~~~~v~~l~~~~-~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------------~~~ 225 (479)
+.. ....|.++++.| + ...+.+++..+.|...+ .+...|..+.... ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCCCC
Confidence 111 112477889987 2 45666666666554443 3333444443221 122
Q ss_pred ccEEEEEEccC-CCEEEEeeCCCeEEE
Q psy14815 226 STVWSLAFDRI-GSRLATCSDDATVKI 251 (479)
Q Consensus 226 ~~v~~~~~~~~-~~~l~s~~~dg~i~i 251 (479)
..+.+|.++|. ...++.+..++.|..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEE
Confidence 45789999874 445555655554433
No 374
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=63.11 E-value=1.4e+02 Score=30.52 Aligned_cols=157 Identities=10% Similarity=0.156 Sum_probs=79.9
Q ss_pred CCcEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeeeeeec----cccceeEEEEecCC-CEEEEEEcCCc----E
Q psy14815 134 ENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINA----HIQDVKKVRFHPFD-NILASASYDDT----V 203 (479)
Q Consensus 134 ~~~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~v~~l~~~~~~-~~l~~~~~dg~----i 203 (479)
...|.+|.++|. ...+++++..+.|...+ ..++.++.+..... ....+.+++++|.. +.+..+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 458999999984 56677777777665443 34444544322111 23468999999843 44555443211 3
Q ss_pred EEEecCCcccceEeeeeecC------CCccEEEEEEccC-CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEE
Q psy14815 204 KLFKEDKAEADWINFATLKS------HTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 276 (479)
Q Consensus 204 ~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 276 (479)
.||--..+...|..+..-.. ....+..++++|. .+.++.+...+. ||...... .+|+.+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG-----------~TW~~~~ 159 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRA-----------KTWTNVT 159 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTT-----------SSCEEET
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCC-----------cccCCCc
Confidence 44444444445655532110 0113456778774 345556653443 34333322 3344332
Q ss_pred EEec--cccccEEEEEecCC-CCeEEEEeCC
Q psy14815 277 TLSG--HHGRTIYDISWCHL-TDLIATACGD 304 (479)
Q Consensus 277 ~~~~--~~~~~i~~l~~~~~-~~~l~~~~~d 304 (479)
.... .....+..+.++|. +..++.+..+
T Consensus 160 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 160 SIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 2110 01245778888874 3355555443
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=55.99 E-value=1.1e+02 Score=26.98 Aligned_cols=203 Identities=10% Similarity=-0.021 Sum_probs=109.6
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeE-------EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce---
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQF-------ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY--- 169 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--- 169 (479)
|+...+++.+.+|.|+--.+..-+. .....++. .+.+..+........++..+..|.+.-+....-...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 3456788899999998776643210 01112222 234444444445567777788888776665332110
Q ss_pred ---ee---eeeeeccccceeEEEEe---cCCCEEEEEEcCCcEEEEecCCccc---ceEeeeeecCCCccEEEEEEccCC
Q psy14815 170 ---EC---AAVINAHIQDVKKVRFH---PFDNILASASYDDTVKLFKEDKAEA---DWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 170 ---~~---~~~~~~~~~~v~~l~~~---~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
.. ...+. ....|.++..- +++.+++..+.+|.++-..+..-.. .......+..+ ..+..+......
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 10 01122 22345544332 2456789999999999987652211 11122334444 555555555556
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
..++..+.+|.+..++...-.... ....+.....+. .+..|.++...+++..+++.+..|.++-.++.
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~g------r~a~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMG------CNTTGVRGIRLG--EGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCC------TTCCCEECCCCC--TTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CEEEEECCCCcEEEEEHHHcCccC------CCCCCeEeEEeC--CCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 678888899998888764321110 001112112222 24566666655556678888899998887763
No 376
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=52.22 E-value=24 Score=30.08 Aligned_cols=81 Identities=14% Similarity=0.175 Sum_probs=52.2
Q ss_pred cccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCc
Q psy14815 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTN 433 (479)
Q Consensus 354 ~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~ 433 (479)
.+...++...+.+..+.. -..++.. ..+.|+++.+|----...+++|.+.|||+.||=. +
T Consensus 136 ~~t~~~l~~~vk~~l~~~--------~~~~g~~-~~~~i~~VAv~~GsG~~~~~~a~~~gaD~~iTGd---------~-- 195 (247)
T 1nmo_A 136 PVPGLELASWIEARLGRK--------PLWCGDT-GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGE---------V-- 195 (247)
T ss_dssp EECHHHHHHHHHHHHTSC--------CEEECTT-SCSSEEEEEECSSSCGGGHHHHHHHCCSEEEESC---------C--
T ss_pred CCcHHHHHHHHHHHcCCC--------eEEECCC-CcCccCEEEEECCCcHHHHHHHHHcCCCEEEEcC---------c--
Confidence 355778888777654321 1233322 1256999999999889999999999999999822 1
Q ss_pred CChhhHHHHHHHhcCceEE-ecccc
Q psy14815 434 DKWKERVVSTCLAHNIAVY-SPHTT 457 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~-~~h~~ 457 (479)
+......+.++|++++ +-|.+
T Consensus 196 ---~~h~~~~a~e~gi~~i~~GH~~ 217 (247)
T 1nmo_A 196 ---SEQTIHSAREQGLHFYAAGHHA 217 (247)
T ss_dssp ---CHHHHHHHHHTTCEEEECCHHH
T ss_pred ---cHHHHHHHHHCCCeEEEcCCHH
Confidence 1123344556777754 34543
No 377
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.89 E-value=42 Score=36.08 Aligned_cols=37 Identities=22% Similarity=0.132 Sum_probs=29.6
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN 127 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~ 127 (479)
..+.+++..++..++++-+.|+++|+|++.+++....
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 3455566677888999999999999999999974433
No 378
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=51.35 E-value=18 Score=32.06 Aligned_cols=52 Identities=17% Similarity=0.246 Sum_probs=37.1
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-.-. ......+++.-+.+.|+.+..+|.
T Consensus 85 ~vpiSIDT~~~~Va~aAl~aGa~iINDVs-----------g~~~d~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 85 DVLISIDTWKSQVAEAALAAGADLVNDIT-----------GLMGDEKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp CCEEEEECSCHHHHHHHHHTTCCEEEETT-----------TTCSCTTHHHHHHHHTCEEEEECC
T ss_pred CceEEEeCCCHHHHHHHHHcCCCEEEECC-----------CCCCChHHHHHHHHcCCCEEEEec
Confidence 4556777 567899999999999995433 221112555666789999999996
No 379
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.82 E-value=18 Score=36.19 Aligned_cols=38 Identities=3% Similarity=0.084 Sum_probs=30.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG 51 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~ 51 (479)
..|.++.+. ..+++|-+.|.++|+||+.+++++....-
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 357766654 67999999999999999999987766533
No 380
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.60 E-value=9.1 Score=41.17 Aligned_cols=37 Identities=5% Similarity=0.092 Sum_probs=31.0
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL 49 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~ 49 (479)
.|.+++..++..+++|-+.|+++|||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556667778889999999999999999999887664
No 381
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=47.82 E-value=24 Score=33.87 Aligned_cols=52 Identities=25% Similarity=0.431 Sum_probs=38.2
Q ss_pred EEEEEecCC-HHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-CceEEeccc
Q psy14815 394 NIMLTIDLT-DEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-NIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d~t-~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~ 456 (479)
.+.+++|-. ++|+++|++.|+++|=. +.......+++.-+.++ |+++..+|+
T Consensus 311 ~vpISIDT~~a~VaeaAl~aGadIIND-----------Vsg~~~d~~m~~vva~~~~~~vVlmH~ 364 (545)
T 2bmb_A 311 KVILSIDTYRSNVAKEAIKVGVDIIND-----------ISGGLFDSNMFAVIAENPEICYILSHT 364 (545)
T ss_dssp GEEEEEECCCHHHHHHHHHTTCCEEEE-----------TTTTSSCTTHHHHHHTCTTSEEEEECC
T ss_pred CCeEEEeCCcHHHHHHHHHcCCCEEEe-----------CCCCcCChHHHHHHHHhCCCeEEEECC
Confidence 567788765 57888899999999944 33222222566777889 999999997
No 382
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=47.34 E-value=24 Score=31.34 Aligned_cols=51 Identities=20% Similarity=0.279 Sum_probs=37.6
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-.-.. .. ..+++.-+.+.|+.+..+|.
T Consensus 117 ~vpISIDT~~~~VaeaAl~aGa~iINDVsg-----------~~-d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 117 DQLISVDTWRAQVAKAACAAGADLINDTWG-----------GV-DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp TCEEEEECSCHHHHHHHHHHTCCEEEETTS-----------SS-STTHHHHHHHHTCEEEEECC
T ss_pred CCeEEEeCCCHHHHHHHHHhCCCEEEECCC-----------CC-chHHHHHHHHhCCCEEEECC
Confidence 4556777 5678999999999999855332 11 12566677889999999996
No 383
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=47.30 E-value=22 Score=31.17 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=37.5
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-. +.... ..+++.-+.+.|+++..+|.
T Consensus 97 ~vpiSIDT~~~~Va~aAl~aGa~iINd-----------Vsg~~-d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 97 NVPLSIDTYKPAVMRAALAAGADLIND-----------IWGFR-QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp CSCEEEECCCHHHHHHHHHHTCSEEEE-----------TTTTC-STTHHHHHSSSSCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHcCCCEEEE-----------CCCCC-chHHHHHHHHhCCCEEEECC
Confidence 3446666 5678999999999999954 33222 22566777889999999997
No 384
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=47.14 E-value=23 Score=30.49 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=34.6
Q ss_pred EEEEecC-CHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 395 IMLTIDL-TDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 395 il~~~d~-t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
+.+++|. .++|+++|++.|+++|= .+.......+.+..+.+.++.+.-+|.
T Consensus 82 v~iSIDT~~~~Va~~al~aGa~iIN-----------DVs~g~~d~~m~~~va~~~~~~vlMH~ 133 (270)
T 4hb7_A 82 VKISVDTFRSEVAEACLKLGVDMIN-----------DQWAGLYDHRMFQIVAKYDAEIILMHN 133 (270)
T ss_dssp SEEEEECSCHHHHHHHHHHTCCEEE-----------ETTTTSSCTHHHHHHHHTTCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHhccceec-----------cccccccchhHHHHHHHcCCCeEEecc
Confidence 4456664 45788889999999882 232222223566777888999999985
No 385
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=45.60 E-value=1.8e+02 Score=26.46 Aligned_cols=156 Identities=12% Similarity=0.008 Sum_probs=90.7
Q ss_pred ECCCCCEEEEEECCCeEEEEECCC-------CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce-
Q psy14815 98 WSPCGNFIASASFDATTAVWDKRS-------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY- 169 (479)
Q Consensus 98 ~~~~~~~l~t~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~- 169 (479)
+-|+...+++.+.+|.|+--.+.. ++-.....++ ..+.+..+........++..+..|.+.-+....-...
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346778999999999999765421 1111223333 2455666666556667787888888776665322110
Q ss_pred -----ee-ee--eeeccccceeEEEEec---CCCEEEEEEcCCcEEEEecCCccc---ceEeeeeecCCCccEEEEEEcc
Q psy14815 170 -----EC-AA--VINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKEDKAEA---DWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 170 -----~~-~~--~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.. .. .+.. ...|.++..-+ ++.+|+.++..|.++...+..... .......+.. ...+..+....
T Consensus 82 r~a~G~~i~~ll~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 82 SNARGRPIINWIPLES-GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp TTSCCEEGGGSCCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred cccCCcCHhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 01 11 1222 33454443322 356899999999999988653221 1122233433 34455555555
Q ss_pred CCCEEEEeeCCCeEEEEeccC
Q psy14815 236 IGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~ 256 (479)
....++..+.+|.+..++...
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGG
T ss_pred CCceEEEEeCCCeEEEEEccc
Confidence 566788888999988887643
No 386
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=45.50 E-value=82 Score=30.82 Aligned_cols=60 Identities=13% Similarity=0.094 Sum_probs=40.7
Q ss_pred cEEEEEECCCCCEEEEEECC------------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 92 TIRETAWSPCGNFIASASFD------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..-.|+|+|.|.+++.-..+ ..+.+.+..+++........ ....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 45678999999866654322 24666677777644333322 35689999999999887765
No 387
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=44.68 E-value=41 Score=23.99 Aligned_cols=46 Identities=11% Similarity=0.242 Sum_probs=34.1
Q ss_pred CCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEecccccccc
Q psy14815 413 GTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAI 461 (479)
Q Consensus 413 ~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~d~~ 461 (479)
+.++-|.-|+. +++-+..+.+..+++..|.+.|+.+|++++.++..
T Consensus 29 ~~~v~vv~~g~---gv~~~~~~~~~~~~i~~l~~~gV~~~~C~~s~~~~ 74 (108)
T 2pd2_A 29 DAEIEVVLHQS---AIKALLKDSDTRSIIEDLIKKNILIVGCENSIRSQ 74 (108)
T ss_dssp TCEEEEEECGG---GGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHHHHT
T ss_pred CCeEEEEEcCh---HHHHHHcCchHHHHHHHHHHCcCEEEecHHHHHHc
Confidence 66777765533 34444444567789999999999999999998865
No 388
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.27 E-value=1.5e+02 Score=25.44 Aligned_cols=204 Identities=10% Similarity=-0.031 Sum_probs=110.2
Q ss_pred cccccccc---cceEEEEECCCCCeEEEeeCCCcEEE---Eecccc---------cccccccCCC-ccceEEEeecCCcE
Q psy14815 4 SQTLKGHQ---GRVWNVSWNPQGTMISSCGEDKNIRL---WVMVIR---------EPYEKLHGLP-VETSLRQLVEDKNI 67 (479)
Q Consensus 4 ~~~l~~h~---~~V~~l~~s~~~~~l~t~~~dg~v~i---wd~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~i 67 (479)
++..+||. +.+..+.-.....+|+.-+++|.+.- |++..+ +.+..+.... .+..++.++.+|.+
T Consensus 13 ir~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~~~~~~~~~v~~T~~G~i 92 (276)
T 3no0_A 13 IIPVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFIREKFGNRLLLATKKGYV 92 (276)
T ss_dssp EEEGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEEGGGSCSEEEEEETTSEE
T ss_pred eeeccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEECCcCCCCEEEEEeCCCEE
Confidence 34455653 34555555444556666667776553 333322 1111111111 34567777788888
Q ss_pred EEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-------CeEEEeEEEeCCCCcEEEE
Q psy14815 68 RLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-------GQFECNATLEGHENEVKSV 140 (479)
Q Consensus 68 ~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~l 140 (479)
+-..++.................+.+..+....+...++..+..|.+..+.... .+-.....+.. ...|.++
T Consensus 93 Kr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~ 171 (276)
T 3no0_A 93 KKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGL 171 (276)
T ss_dssp EEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEE
T ss_pred EEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEE
Confidence 877766543111111111123345666666666667888889999988887432 11112223332 3566666
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCcee----eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEE--EecC
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYE----CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL--FKED 209 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i--~d~~ 209 (479)
...+++..++..+..|.++...+..-.... -...+ ...+.+-.+........++..+.+|.+.. ++..
T Consensus 172 ~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 172 RIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 655667789999999999998875432111 01111 12233444433333456667777888777 7664
No 389
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=43.49 E-value=1.9e+02 Score=26.32 Aligned_cols=152 Identities=10% Similarity=0.072 Sum_probs=79.6
Q ss_pred CCcEEEEEEC---CC----CCEEEEEE-CCCeEEEEECCCCeEEEeEE------------EeCC----CCcEEEEEEcCC
Q psy14815 90 QRTIRETAWS---PC----GNFIASAS-FDATTAVWDKRSGQFECNAT------------LEGH----ENEVKSVTWSKN 145 (479)
Q Consensus 90 ~~~v~~v~~~---~~----~~~l~t~~-~dg~i~iwd~~~~~~~~~~~------------~~~~----~~~v~~l~~~~~ 145 (479)
.+.+..+.+. |. +.++..+. ..+-|.|+|+.+++...+.. ..+. ...+..|+++|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 3567777776 22 23443333 36789999999886332220 0010 136788999987
Q ss_pred ----CCEEEEEeCCCcEEEEEeC-----CCCceeeeeeeecc--ccceeEEEEe-cCCCEEEEEEcCCcEEEEecCC-cc
Q psy14815 146 ----GQFLATCSRDKSVWVWEVG-----EEDEYECAAVINAH--IQDVKKVRFH-PFDNILASASYDDTVKLFKEDK-AE 212 (479)
Q Consensus 146 ----~~~l~~~~~dg~i~vwd~~-----~~~~~~~~~~~~~~--~~~v~~l~~~-~~~~~l~~~~~dg~i~i~d~~~-~~ 212 (479)
++.|+-....+ -++|.+. .......++.+... ...-..+++. .+|.++++--....|..|+..+ .-
T Consensus 231 ~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp CTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSB
T ss_pred cCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCcc
Confidence 67777665544 2344443 22111112212111 1223356675 5777777777888899999875 21
Q ss_pred --cceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 213 --ADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 213 --~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.....+..-. .-..+..+.+.++|...+..
T Consensus 310 ~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 310 RMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CGGGEEEEEECT-TCCSEEEEEECTTSCEEEEE
T ss_pred ccCceEEEEECC-CccccCeEEECCCCeEEEEE
Confidence 1111222111 22345666666555444433
No 390
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.34 E-value=87 Score=30.64 Aligned_cols=62 Identities=15% Similarity=0.118 Sum_probs=37.9
Q ss_pred cEEEEEEccCCCEEEEeeCC----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 227 TVWSLAFDRIGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
..-.|+|+|.|.+++.-..+ +.-.+|-... ...+..+-+.+..+..++.++|+||++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~-------------~~g~~~rf~~~P~gaE~TG~~fspDg~ 543 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADP-------------ATGEIRRFMVGPIGCEVTGISFSPDQK 543 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECT-------------TTCCEEEEEECCTTCEEEEEEECTTSS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeC-------------CCCeEEEEEeCCCCccCcCeeECCCCC
Confidence 35678999999865543322 1112222211 122344455566688999999999999
Q ss_pred eEEEE
Q psy14815 297 LIATA 301 (479)
Q Consensus 297 ~l~~~ 301 (479)
.|++.
T Consensus 544 tlfvn 548 (592)
T 3zwu_A 544 TLFVG 548 (592)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87765
No 391
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=41.98 E-value=2e+02 Score=26.08 Aligned_cols=233 Identities=6% Similarity=-0.052 Sum_probs=120.9
Q ss_pred CCCCCeEEEeeCCCcEEEEeccccc-------ccccccC-----------CCccceEEEeecCCcEEE---ecCCCCCCc
Q psy14815 20 NPQGTMISSCGEDKNIRLWVMVIRE-------PYEKLHG-----------LPVETSLRQLVEDKNIRL---WGKESFGNK 78 (479)
Q Consensus 20 s~~~~~l~t~~~dg~v~iwd~~~~~-------~~~~~~~-----------~~~~~~~~~~~~~~~i~~---w~~~~~~~~ 78 (479)
-|+..++++.+.+|.|+--.+.... -+..+.. ......++.+++.|.+.- +++...+..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 4677888889999988876543211 1111111 122344555666665443 444433222
Q ss_pred eeeeEE---eccccCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCC-----eEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 79 FTAKAI---LSDGHQRTIRETAWSP---CGNFIASASFDATTAVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 79 ~~~~~~---~~~~~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
...... +.......|.++..-+ ++.+|+.++..|.++.-.+..- +-.....++. .+.+..+.......
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 222111 1123345666554432 4569999999999998875321 1112223433 34555555555566
Q ss_pred EEEEEeCCCcEEEEEeCCCCcee------eeeeeeccccceeEEEEec--------------------------------
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYE------CAAVINAHIQDVKKVRFHP-------------------------------- 189 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~------~~~~~~~~~~~v~~l~~~~-------------------------------- 189 (479)
.++..+.+|.+..++...-.... ....+. ....|-++...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 78888899998888865421100 001111 123344443333
Q ss_pred ---CCCEEEEEEcCCcEEEEecCCcccc-----eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 190 ---FDNILASASYDDTVKLFKEDKAEAD-----WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 190 ---~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
++..+++.+..|..+...+..-... ......+....+.+..+.+..+...++..+..|.+.-...
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v 314 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRG 314 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEG
T ss_pred cccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeH
Confidence 3457889999999888876532110 0111122223344555444444556666677777666655
No 392
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=41.71 E-value=1.7e+02 Score=25.19 Aligned_cols=214 Identities=14% Similarity=0.128 Sum_probs=112.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccc----c---ccCC-CccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYE----K---LHGL-PVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~----~---~~~~-~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..|..++....-.+++ . ||.|..|-......+. . +... ......+.. .++.+..|.....+..-..
T Consensus 24 ~~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~~G~v~~wG~n~~Gqlg~P-- 97 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTVP-- 97 (282)
T ss_dssp SSCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCCC--
T ss_pred CCCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-ECCEEEEeeCCCCCCCCCC--
Confidence 4677888776544444 3 8889999654322211 1 1111 112222333 4899999987654332211
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
..-...|..++...+- .+.-. ||.|..|-... ++. . ........|..++...+.. ++ -. ||.|..|-
T Consensus 98 ---~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gql-g--~~~~~~~~i~~i~~G~~~~-~~-l~-~G~v~~wG 165 (282)
T 3qhy_B 98 ---AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQT-T--VPAEAQSGVTALDGGVYTA-LA-VK-NGGVIAWG 165 (282)
T ss_dssp ---GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTT-S--CCGGGGSSEEEEEECSSEE-EE-EE-TTEEEEEE
T ss_pred ---cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcC-C--CCccCCCCeEEEEcccCEE-EE-EE-CCEEEEec
Confidence 1123578888776443 33334 89999997643 221 0 0111234577776643322 22 33 79999998
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.....+... ...-...|..++...+ ..++. .+|.|..|-.........+. .....|..++-... +.+.
T Consensus 166 ~n~~gqlg~---p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~--h~~a 233 (282)
T 3qhy_B 166 DNYFGQTTV---PAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEW--YSLA 233 (282)
T ss_dssp CCTTSTTSC---CGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSS--CEEE
T ss_pred CCCCCCCCC---ceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCC--EEEE
Confidence 765432211 1111345777766532 23333 59999999765433211111 11234666665543 3333
Q ss_pred eeCCCeEEEEeccC
Q psy14815 243 CSDDATVKIWKEYK 256 (479)
Q Consensus 243 ~~~dg~i~iwd~~~ 256 (479)
-. ||.|..|-...
T Consensus 234 l~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 234 LK-NGKVIAWGSSR 246 (282)
T ss_dssp EE-TTEEEEESTTC
T ss_pred EE-CCEEEEecCCC
Confidence 34 99999997544
No 393
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=40.39 E-value=30 Score=30.57 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=37.5
Q ss_pred EEEEEecC-CHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEecccc
Q psy14815 394 NIMLTIDL-TDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTT 457 (479)
Q Consensus 394 ~il~~~d~-t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 457 (479)
.+.+++|- .++++++|++.|+++|-. +...... +.+.-+.+.|+++..+|..
T Consensus 105 ~vpISIDT~~~~Va~aAl~aGa~iIND-----------Vsg~~~~-~m~~v~a~~g~~vVlMh~~ 157 (314)
T 3tr9_A 105 PQLISVDTSRPRVMREAVNTGADMIND-----------QRALQLD-DALTTVSALKTPVCLMHFP 157 (314)
T ss_dssp CSEEEEECSCHHHHHHHHHHTCCEEEE-----------TTTTCST-THHHHHHHHTCCEEEECCC
T ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEEE-----------CCCCCch-HHHHHHHHhCCeEEEECCC
Confidence 35577776 468999999999999954 2222221 5666677889999999964
No 394
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=39.97 E-value=69 Score=25.84 Aligned_cols=67 Identities=10% Similarity=0.176 Sum_probs=42.9
Q ss_pred ccEEEEEecCCHHHH--HHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccccccccC
Q psy14815 392 IKNIMLTIDLTDEVL--KEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQ 462 (479)
Q Consensus 392 v~~il~~~d~t~~~~--~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~ 462 (479)
+++++++-.--.... -+++ .|.++|++-|+.=|+.. ....+..+...+|.+.|+.||...-.|.-.+
T Consensus 44 Ik~iVVAS~sG~TA~k~~e~~-~~i~lVvVTh~~GF~~p---g~~e~~~e~~~~L~~~G~~V~t~tH~lsgve 112 (201)
T 1vp8_A 44 IKHLVVASSYGDTAMKALEMA-EGLEVVVVTYHTGFVRE---GENTMPPEVEEELRKRGAKIVRQSHILSGLE 112 (201)
T ss_dssp CCEEEEECSSSHHHHHHHHHC-TTCEEEEEECCTTSSST---TCCSSCHHHHHHHHHTTCEEEECCCTTTTTH
T ss_pred CCEEEEEeCCChHHHHHHHHh-cCCeEEEEeCcCCCCCC---CCCcCCHHHHHHHHhCCCEEEEEeccccchh
Confidence 566666655443332 2333 46678866555555542 3444456788999999999999988886443
No 395
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.19 E-value=1.8e+02 Score=28.28 Aligned_cols=61 Identities=13% Similarity=0.143 Sum_probs=42.2
Q ss_pred CcEEEEEECCCCCEEEEEEC------------CCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASF------------DATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~------------dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~ 153 (479)
.....|.|.++|.+.+.... .+.+..++..+++...+ +.. ....++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~f--l~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF--MVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEE--EECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEE--EeCCCCccccCCEECCCCCEEEEEE
Confidence 56778999999987774322 12577777777864332 333 235789999999999888764
No 396
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=38.16 E-value=37 Score=29.55 Aligned_cols=51 Identities=16% Similarity=0.285 Sum_probs=37.1
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-.-... ...+.+.-+.+.|+++..+|.
T Consensus 90 ~~piSIDT~~~~va~aAl~aGa~iINdvsg~------------~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 90 EVWISVDTSKPEVIRESAKVGAHIINDIRSL------------SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp CCEEEEECCCHHHHHHHHHTTCCEEEETTTT------------CSTTHHHHHHHHTCCEEEECC
T ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEEECCCC------------CCHHHHHHHHHhCCeEEEEcc
Confidence 4456676 56789999999999999553322 112456667788999999996
No 397
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=37.86 E-value=67 Score=27.08 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=38.4
Q ss_pred EEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-------------CceEEeccccccc
Q psy14815 394 NIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-------------NIAVYSPHTTWDA 460 (479)
Q Consensus 394 ~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~h~~~d~ 460 (479)
.+-+-++--...++.+.+.|||.|+.|= .. .....+.+..+.+. |+++ .++|+++.
T Consensus 73 DvhLMv~~p~~~i~~~~~aGAd~itvH~-------ea---~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l-~p~Tp~~~ 141 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAVVANGANLVTLQL-------EQ---YHDFALTIEWLAKQKTTYANQVYPVLIGACL-CPETPISE 141 (237)
T ss_dssp EEEEECSCHHHHHHHHHHTTCSEEEEET-------TC---TTSHHHHHHHHTTCEEEETTEEEECEEEEEE-CTTSCGGG
T ss_pred CeEEEEECHHHHHHHHHHcCCCEEEEec-------CC---cccHHHHHHHHHhcccccccccCCceEEEEE-eCCChHHH
Confidence 3444445456789999999999988773 11 12244666666666 5555 77999887
Q ss_pred cC
Q psy14815 461 IQ 462 (479)
Q Consensus 461 ~~ 462 (479)
..
T Consensus 142 l~ 143 (237)
T 3cu2_A 142 LE 143 (237)
T ss_dssp GT
T ss_pred HH
Confidence 65
No 398
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=37.52 E-value=2.2e+02 Score=25.25 Aligned_cols=155 Identities=7% Similarity=-0.011 Sum_probs=90.4
Q ss_pred ccceEEEeecCCcEEEecCCCCCCcee-eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC--CCe-------
Q psy14815 54 VETSLRQLVEDKNIRLWGKESFGNKFT-AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQ------- 123 (479)
Q Consensus 54 ~~~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~--~~~------- 123 (479)
....++.++..|.++--.++.+..... ..........+.+..+........++..+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 356777888888888877665443221 1111112234556666555566788888889998888766 210
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce------eeeeeeeccccceeEEEEecCCCEEEEE
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY------ECAAVINAHIQDVKKVRFHPFDNILASA 197 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 197 (479)
-.....+. ....|.++...+++..++..+..|.++.-.+..-... .....+..-...+-.+....+...++..
T Consensus 188 Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~ 266 (327)
T 3uc1_A 188 GVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAV 266 (327)
T ss_dssp CEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEE
Confidence 01122233 2456777776666778999999999998887543211 0111121212234444443445567777
Q ss_pred EcCCcEEEEecC
Q psy14815 198 SYDDTVKLFKED 209 (479)
Q Consensus 198 ~~dg~i~i~d~~ 209 (479)
+.+|.+.-++..
T Consensus 267 T~~G~~ir~~~~ 278 (327)
T 3uc1_A 267 TSGGGVIRTAAR 278 (327)
T ss_dssp EGGGCEEEEEGG
T ss_pred cCCCeEEEEehh
Confidence 888888777765
No 399
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=37.23 E-value=37 Score=29.53 Aligned_cols=52 Identities=15% Similarity=0.244 Sum_probs=37.1
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-.-. ......+.+.-+.+.|+++..+|.
T Consensus 80 ~~piSIDT~~~~va~aAl~aGa~iINdvs-----------g~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 80 GITVSIDTMRADVARAALQNGAQMVNDVS-----------GGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp TCCEEEECSCHHHHHHHHHTTCCEEEETT-----------TTSSCTTHHHHHHHHTCCEEEECC
T ss_pred CCEEEEeCCCHHHHHHHHHcCCCEEEECC-----------CCCCCHHHHHHHHHhCCeEEEEcC
Confidence 3446666 567899999999999995432 222122566677889999999997
No 400
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.05 E-value=2e+02 Score=27.94 Aligned_cols=62 Identities=15% Similarity=0.092 Sum_probs=36.9
Q ss_pred ccEEEEEEccCCCEEEEeeCC------------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 226 STVWSLAFDRIGSRLATCSDD------------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
.....|.|+++|.+.+..... ..+..++.. ..+....+.+.....++.++|+|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~---------------tGel~~fl~~P~~aEpnGiafSP 540 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA---------------TGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT---------------TCCEEEEEECCTTCEEEEEEECT
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC---------------CCeEEEEEeCCCCccccCCEECC
Confidence 456789999998876632211 123333321 12223333443356799999999
Q ss_pred CCCeEEEEe
Q psy14815 294 LTDLIATAC 302 (479)
Q Consensus 294 ~~~~l~~~~ 302 (479)
|++.|.++-
T Consensus 541 D~ktLfV~v 549 (592)
T 4a9v_A 541 DQKTLFVGI 549 (592)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 999887763
No 401
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=34.64 E-value=2.1e+02 Score=24.23 Aligned_cols=152 Identities=12% Similarity=-0.014 Sum_probs=79.5
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC---cccceEeee---ee
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK---AEADWINFA---TL 221 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~---~~ 221 (479)
..++.+.+|.|+--....... . ...+... ..+..+........|+..+..|.++-+.... ......++. .+
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~-~-~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L 80 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDA-P-GLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTL 80 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCS-T-TSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCc-e-eccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecC
Confidence 455667777777655543210 0 1112222 2333333333445667778888876665432 111112111 12
Q ss_pred cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEE
Q psy14815 222 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIAT 300 (479)
Q Consensus 222 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~ 300 (479)
. ....|.++....++.+|+.++..|.++...+..-.... ..+.....+.. +..+..+... .++..++.
T Consensus 81 ~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~--------r~G~~~i~L~~--~d~lv~~~~~~~~~~~i~l 149 (256)
T 1zvt_A 81 P-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARN--------RAGKALITLPE--NAHVMPPVVIEDASDMLLA 149 (256)
T ss_dssp C-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCS--------TTCEECBCCCT--TCCBCCCEECCCTTCEEEE
T ss_pred C-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccC--------cCceEEEEECC--CCEEEEEEEecCCCCEEEE
Confidence 2 23466666443456778899999999999875432211 12222233332 2344444444 34456777
Q ss_pred EeCCCeEEEcccC
Q psy14815 301 ACGDDAIRIFKEN 313 (479)
Q Consensus 301 ~~~dg~i~vw~~~ 313 (479)
.+.+|.+..+...
T Consensus 150 ~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 150 ITQAGRMLMFPVS 162 (256)
T ss_dssp EETTSEEEEEEGG
T ss_pred EcCCCeEEEEEHH
Confidence 8888888777664
No 402
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=34.49 E-value=48 Score=29.02 Aligned_cols=51 Identities=29% Similarity=0.391 Sum_probs=37.0
Q ss_pred EEEEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 394 NIMLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 394 ~il~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+.+++| ..++++++|++.|+++|-. +... ...+++.-+.+.|+++..+|.
T Consensus 103 ~vpiSIDT~~~~Va~aAl~aGa~iINd-----------Vsg~-~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 103 GVPVSVDTRKPEVAEEALKLGAHLLND-----------VTGL-RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp CSCEEEECSCHHHHHHHHHHTCSEEEC-----------SSCS-CCHHHHHHHHHHTCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHhCCCEEEE-----------CCCC-CChHHHHHHHHhCCCEEEEcC
Confidence 3445666 4678999999999998844 3332 223667777889999999996
No 403
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=34.47 E-value=42 Score=29.44 Aligned_cols=50 Identities=22% Similarity=0.359 Sum_probs=32.8
Q ss_pred EEEec-CCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEeccc
Q psy14815 396 MLTID-LTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 396 l~~~d-~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 456 (479)
.+++| ..++++++|++.|+++|-. +.......+++..+.+.|+++..+|.
T Consensus 117 piSIDT~~~~V~~aAl~aGa~iINd-----------vsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 117 PISIDTYKAEVAKQAIEAGAHIIND-----------IWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp CEEEECSCHHHHHHHHHHTCCEEEE-----------TTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred eEEEeCCCHHHHHHHHHcCCCEEEE-----------CCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 34555 4567888888889888833 33222122556666778888888886
No 404
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=34.33 E-value=71 Score=32.00 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=28.6
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 130 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 130 (479)
..|.++.+ +..++++-+.|.++|+|++.+++......+
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666555 367999999999999999999974444333
No 405
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=34.17 E-value=3.8e+02 Score=27.06 Aligned_cols=208 Identities=13% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEe-----C----CCCcEEEEEEcC-CCCEEEEEeCC---
Q psy14815 90 QRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLE-----G----HENEVKSVTWSK-NGQFLATCSRD--- 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~----~~~~v~~l~~~~-~~~~l~~~~~d--- 155 (479)
...|.+|.++|.+ ..++.+...|.|...+=....+..+..-. + ....+.+++++| +...++.+...
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Q ss_pred ---CcEEEEEeCCCCceeeeeeee------ccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 156 ---KSVWVWEVGEEDEYECAAVIN------AHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 156 ---g~i~vwd~~~~~~~~~~~~~~------~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
+...+.....++.++.+.... ........++++| +...+.++...+ .+|--..+...|..+..+....
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~--~l~~S~DgG~TW~~~~~~~~~~ 177 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQ--GLWRSTDRAQTWSRMNQLPDSS 177 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSS--CEEEESSTTSSCEECTTSCCCS
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCC--cEEEECCCCcCccccccCcccC
Q ss_pred ---ccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------------cc
Q psy14815 226 ---STVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------------HG 283 (479)
Q Consensus 226 ---~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~ 283 (479)
..+..++++|.. ..++.+..++. .+|...... .+|+.+.....+ ..
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~g-~v~~S~DgG-----------~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 245 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAVG-GLWVTWDGG-----------ANWSQVGGQPTQWSDWTKSIVAASGTAIQSSG 245 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESSTT-CEEEESSSS-----------SSCEECTTCCCSCCHHHHHHHHHHCCCCSSSS
T ss_pred CCccceEEEEECCCCCCEEEEEEeCCC-eEEEECCCC-----------CCccccCCCccccccccccccccccccccCCC
Q ss_pred ccEEEEEecCCCCeEEE--------EeCCCeEEEcc
Q psy14815 284 RTIYDISWCHLTDLIAT--------ACGDDAIRIFK 311 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~--------~~~dg~i~vw~ 311 (479)
.....+.+.+++.++++ +...+.+...+
T Consensus 246 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~ 281 (763)
T 3a0f_A 246 PLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYD 281 (763)
T ss_dssp CEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEE
T ss_pred CcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEe
No 406
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=34.13 E-value=2.7e+02 Score=25.23 Aligned_cols=212 Identities=13% Similarity=0.095 Sum_probs=106.3
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCC---------eEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSG---------QFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~---------~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+..++.. ....+.-..||.|..|-.... .......+.. ....+..++.+......+.-..||.|..|
T Consensus 54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 34444432 345556677888888864321 1011111221 12345556666666677777889999999
Q ss_pred EeCCCCce--------eeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--------ceEeeeeecCC
Q psy14815 162 EVGEEDEY--------ECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--------DWINFATLKSH 224 (479)
Q Consensus 162 d~~~~~~~--------~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~ 224 (479)
-.....+. .....+.. ....|..++.. ....++-..+|.|..|-...... ...+.......
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~ 209 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 209 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGT
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccC
Confidence 75432110 01111111 11245555543 45566667899999997543110 01111111112
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
...|..++......+.+....||.|..|-.....+.-.-. ......+ ..+.......|..++.... ..+.-..|
T Consensus 210 ~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~---~~~~~~p-~~v~~~~~~~v~~v~~G~~--hs~alt~~ 283 (389)
T 3kci_A 210 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---SDGCKVP-MKIDSLTGLGVVKVECGSQ--FSVALTKS 283 (389)
T ss_dssp TSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSS---CCCEEEE-EECGGGTTSCEEEEEEETT--EEEEEETT
T ss_pred CCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCC---CCCcccc-EEecccCCCcEEEEeCCCC--EEEEEeCC
Confidence 3456677665434566777889999999754433221100 0111111 1222222334666665433 34444678
Q ss_pred CeEEEcccC
Q psy14815 305 DAIRIFKEN 313 (479)
Q Consensus 305 g~i~vw~~~ 313 (479)
|.|+.|=..
T Consensus 284 G~v~~wG~n 292 (389)
T 3kci_A 284 GAVYTWGKG 292 (389)
T ss_dssp SCEEEEECC
T ss_pred CeEEEEeCC
Confidence 899998654
No 407
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=33.20 E-value=3.9e+02 Score=26.84 Aligned_cols=150 Identities=12% Similarity=0.083 Sum_probs=71.0
Q ss_pred CcEEEEEECC-CCCEEEEEECC-------CeEEEEECC-CCe-EEEeEEEeCC-------CCcEEEEEEcC-CCCEEEEE
Q psy14815 91 RTIRETAWSP-CGNFIASASFD-------ATTAVWDKR-SGQ-FECNATLEGH-------ENEVKSVTWSK-NGQFLATC 152 (479)
Q Consensus 91 ~~v~~v~~~~-~~~~l~t~~~d-------g~i~iwd~~-~~~-~~~~~~~~~~-------~~~v~~l~~~~-~~~~l~~~ 152 (479)
..|.+|+++| +.+.++.+... +...||... .|+ +.... .... ...+..++++| +...++.+
T Consensus 72 ~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~-~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g 150 (737)
T 2cn3_A 72 YGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTI-LPFKMGGNMPGRSMGERLAIDPNDNRILYLG 150 (737)
T ss_dssp GCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEE-CSSCCCTTSTTTTSCCCEEECSSCTTCEEEE
T ss_pred CCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCC-CCcccCCCcCcccccceEEECCCCCCEEEEe
Confidence 4689999998 33444444321 124455433 332 22221 1110 01246788988 44667776
Q ss_pred eCCCcEEEEE-eCCCCceeeeeeeecc--------------ccceeEEEEecCC-------CEEEEEEcCCcEEEEecCC
Q psy14815 153 SRDKSVWVWE-VGEEDEYECAAVINAH--------------IQDVKKVRFHPFD-------NILASASYDDTVKLFKEDK 210 (479)
Q Consensus 153 ~~dg~i~vwd-~~~~~~~~~~~~~~~~--------------~~~v~~l~~~~~~-------~~l~~~~~dg~i~i~d~~~ 210 (479)
...|. -+|- ...+..++.+..+..+ ...+..+.++|.. ..+.++..++.-.+|--..
T Consensus 151 ~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~D 229 (737)
T 2cn3_A 151 TRCGN-GLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTD 229 (737)
T ss_dssp CSTTC-CEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESS
T ss_pred eccCC-cEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcC
Confidence 64322 2333 3334444443322211 1236778888743 2566666554323454444
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+...|..+..+.. ......+.++|++...++.
T Consensus 230 gG~tW~~~~~~p~-~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 230 GGVTWKAVPGQPK-GLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp TTSCCEECTTCCC-SSEEEEEEECTTSEEEEEE
T ss_pred CCCceEECCCCCC-cccceEEEECCCCeEEEEe
Confidence 4445655442221 1122456677766555543
No 408
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=32.28 E-value=2.6e+02 Score=24.64 Aligned_cols=204 Identities=12% Similarity=0.045 Sum_probs=109.8
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeE--EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce------e-
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQF--ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY------E- 170 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~------~- 170 (479)
|+...+++.+.+|.|+--.+..-+. .....++. .+.+..+........++..+..|.+.-+....-... .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5567788899999998765431000 00112232 234445444445567777788888776665332110 1
Q ss_pred --eeeeeeccccceeEE-EEec--CCCEEEEEEcCCcEEEEecCCccc----ceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 171 --CAAVINAHIQDVKKV-RFHP--FDNILASASYDDTVKLFKEDKAEA----DWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 171 --~~~~~~~~~~~v~~l-~~~~--~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
....+.. ...|.++ ...+ ++.+++.++.+|.++-..+..-.. .......+... ..+..+........++
T Consensus 82 i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEE
T ss_pred hhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEE
Confidence 0111221 2335444 3332 256789999999999988753221 11122233333 4555555555566788
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 314 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~ 314 (479)
..+.+|.+..+....-.... ....+.....+. .+..|.++...+++. .+++.+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~g------R~a~GV~~i~L~--~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVG------VRAAGVKGMNLK--EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCC------SSCCCEECCCCC--TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccC------CCCcCEEEEEeC--CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 88999999888875421110 011122222222 244566665444444 688888888877766543
No 409
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=30.57 E-value=59 Score=28.26 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=34.2
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEecccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTT 457 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 457 (479)
+..++|.+.|+|.++.--|++++|. + .....+-+.++.+ ++.|+-||-+
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~---~-~~~l~~~f~~va~-~lPiilYn~P 127 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGS---L-GAGLLRYYEALAE-KMPLFLYHVP 127 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGG---T-TTHHHHHHHHHHH-HSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCC---C-HHHHHHHHHHHhc-CCCEEEEeCc
Confidence 3445677899999999999998872 1 2223344556666 8999988843
No 410
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=30.42 E-value=61 Score=28.32 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEecc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPH 455 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h 455 (479)
+..++|.+.|+|.++.--|++++|- .+. ..+-+..+.+ .++.|+-||
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s----~~~-l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 86 AFVRHAQNAGADGVLIVSPYYNKPT----QEG-IYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCC----HHH-HHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCC----HHH-HHHHHHHHHHhCCCCEEEEe
Confidence 3455678899999999999999872 111 1222233333 378888877
No 411
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=30.29 E-value=58 Score=28.67 Aligned_cols=48 Identities=8% Similarity=0.090 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-CceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-NIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|- .. ...+-+.++.++ ++.|+-||-
T Consensus 101 ~la~~a~~~Gadavlv~~P~y~~~s----~~-~l~~~f~~va~a~~lPiilYn~ 149 (304)
T 3l21_A 101 RLAKACAAEGAHGLLVVTPYYSKPP----QR-GLQAHFTAVADATELPMLLYDI 149 (304)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCC----HH-HHHHHHHHHHTSCSSCEEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCC----HH-HHHHHHHHHHHhcCCCEEEEeC
Confidence 4455788899999999999999872 11 122334445443 788888873
No 412
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=30.11 E-value=91 Score=27.13 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=24.5
Q ss_pred CEEEEeCCCCcccccccCcCChhhHHHHHHHhc--Cc-eEEecccccc
Q psy14815 415 DLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH--NI-AVYSPHTTWD 459 (479)
Q Consensus 415 ~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~h~~~d 459 (479)
-++++|||++-...... ......+.+.++++. +| .+++-||=..
T Consensus 223 ~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~ 269 (322)
T 2nxf_A 223 VLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDG 269 (322)
T ss_dssp EEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTC
T ss_pred EEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCC
Confidence 46889999875542211 111123455666654 55 4788887543
No 413
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.26 E-value=52 Score=27.25 Aligned_cols=20 Identities=20% Similarity=0.474 Sum_probs=18.5
Q ss_pred CHHHHHHHHHcCCCEEEEeC
Q psy14815 402 TDEVLKEAVENGTDLIIAYH 421 (479)
Q Consensus 402 t~~~~~~a~~~~~~~i~~~h 421 (479)
|.+.+++|++.||++|++.+
T Consensus 74 t~~~a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 74 TADDFQKAIDAGAQFIVSPG 93 (217)
T ss_dssp SHHHHHHHHHHTCSEEEESS
T ss_pred CHHHHHHHHHcCCCEEEeCC
Confidence 89999999999999999955
No 414
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.08 E-value=67 Score=28.09 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcc-cccccCcCChhhHHHHHHHhc----CceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFA-PLKRVTNDKWKERVVSTCLAH----NIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++ | +.+ ...+-+.++.++ ++.|+-||-
T Consensus 89 ~la~~A~~~Gadavlv~~P~y~~~~----s~~-~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 89 DQSAEALNAGARNILLAPPSYFKNV----SDD-GLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSCSC----CHH-HHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCC----CHH-HHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 34556778999999999999998 5 111 122334444544 788887773
No 415
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=27.56 E-value=4.5e+02 Score=26.23 Aligned_cols=157 Identities=10% Similarity=-0.042 Sum_probs=75.5
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCcee-eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEE---ecCCcccceEeee
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF---KEDKAEADWINFA 219 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~---d~~~~~~~~~~~~ 219 (479)
++....++-+.+|.|+-- .+.... .-..+.. ...+..+.-......++.-+..|.++.. ++........++.
T Consensus 470 ~~e~v~v~ls~~GyiKr~---~g~~~~~~~~~~k~-~D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i~ 545 (716)
T 1zvu_A 470 PSEPVTIVLSQMGWVRSA---KGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLT 545 (716)
T ss_dssp CCCCCCEEEETTTEEEEC---CC----------------CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBST
T ss_pred CCceEEEEEecCCeEecc---CCCCcCccccccCC-CCeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeHH
Confidence 355567777888888752 111000 0001111 1222223222333445555666764433 3332221112222
Q ss_pred eec--CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCC
Q psy14815 220 TLK--SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTD 296 (479)
Q Consensus 220 ~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~ 296 (479)
.+- .....|..+.-..++.+++.++..|.++.-.+....... ..+.....+.. +..+..+... ..+.
T Consensus 546 ~ll~l~~~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~--------~~g~~ai~L~~--~d~lv~~~~~~~~~~ 615 (716)
T 1zvu_A 546 GKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARN--------RAGKALITLPE--NAHVMPPVVIEDASD 615 (716)
T ss_dssp TTSCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCS--------TTCEECBCCCT--TCCBCCCEECCCTTC
T ss_pred hccCCCCCCeEEEEEEecCCceEEEEeCCceEEEecHHHhcccC--------ccceEEEeeCC--CCEEEEEEEecCCCC
Confidence 221 123456666554567788899999999999875543221 11222222332 3344444444 3345
Q ss_pred eEEEEeCCCeEEEcccCC
Q psy14815 297 LIATACGDDAIRIFKENP 314 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~ 314 (479)
.++..+.+|..-.|+...
T Consensus 616 ~v~l~t~~g~~lrf~~~~ 633 (716)
T 1zvu_A 616 MLLAITQAGRMLMFPVSD 633 (716)
T ss_dssp EEEEEETTSEEEEEESTT
T ss_pred EEEEEeCCCeEEEEEHHH
Confidence 677788888888887653
No 416
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=26.97 E-value=90 Score=26.43 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=25.9
Q ss_pred cCCCEEEEeCCCCcccccccCcCC-hhhHHHHHHHh-c-Cc-eEEeccccc
Q psy14815 412 NGTDLIIAYHPPIFAPLKRVTNDK-WKERVVSTCLA-H-NI-AVYSPHTTW 458 (479)
Q Consensus 412 ~~~~~i~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~-~~~~~h~~~ 458 (479)
..-.++++|||++..+........ .....+.++++ . ++ .+++-||=.
T Consensus 148 ~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~ 198 (274)
T 3d03_A 148 DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHS 198 (274)
T ss_dssp TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCC
Confidence 345688999999865422111111 12244555654 4 66 667777754
No 417
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=26.00 E-value=97 Score=28.16 Aligned_cols=56 Identities=18% Similarity=0.266 Sum_probs=42.2
Q ss_pred cccHHHHHHHHHHhCCCccCCCCCcceeee-ccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEE
Q psy14815 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLLI-EPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIA 419 (479)
Q Consensus 354 ~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v-~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~ 419 (479)
.+...++...+.+..+.. ++.+ +.. .+.|+++.+|----...+++|.+.|||+.||
T Consensus 251 p~tl~~~~~~vk~~l~~~--------~vr~~g~~--~~~I~~VAvc~GsG~~~i~~a~~~gaDvyIT 307 (370)
T 2nyd_A 251 QMTLEDFAADIKSKLNIP--------SVRFVGES--NQKIKRIAIIGGSGIGYEYQAVQQGADVFVT 307 (370)
T ss_dssp EEEHHHHHHHHHHHTTCS--------CCEEESCT--TCEEEEEEECCSCCTTSHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHHcCCC--------ceEEecCC--CCcccEEEEEcCCCHHHHHHHHHcCCCEEEe
Confidence 456788888887765422 2333 333 3679999999888888999999999999988
No 418
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=25.75 E-value=45 Score=28.68 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=42.3
Q ss_pred CHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-C-ceEEeccccccccCCCccccCCCcCCCC
Q psy14815 402 TDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-N-IAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 402 t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
..+.+++|+.+|+|-++.--.--|.+.. .....+.|..+++. + =-|++.||..|---+-+=-.||..||+|
T Consensus 69 ~~~~lr~ala~GaD~vi~v~d~~~~~~~----~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~ 141 (264)
T 1o97_C 69 VDESLRKCLAKGADRAVRVWDDAAEGSD----AIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWP 141 (264)
T ss_dssp GHHHHHHHHHTTCSEEEEECCGGGTTCC----HHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCEEEEEcCcccccCC----HHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCC
Confidence 4578999999999987654322222211 11234566667654 1 2478889988744333445566666655
No 419
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=25.16 E-value=86 Score=27.40 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|- ... ..+-+..+.+ .++.|+-|+-
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s----~~~-l~~~f~~va~a~~lPiilYn~ 134 (294)
T 2ehh_A 86 HLTAHAKEVGADGALVVVPYYNKPT----QRG-LYEHFKTVAQEVDIPIIIYNI 134 (294)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCC----HHH-HHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCC----HHH-HHHHHHHHHHhcCCCEEEEeC
Confidence 3445678899999999999999872 111 1222333333 3788887773
No 420
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.49 E-value=79 Score=27.80 Aligned_cols=48 Identities=10% Similarity=0.096 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-C-ceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-N-IAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|- .+. ..+-+..+.++ + +.|+-|+-
T Consensus 97 ~la~~A~~~Gadavlv~~P~y~~~s----~~~-l~~~f~~va~a~~~lPiilYn~ 146 (303)
T 2wkj_A 97 QLAASAKRYGFDAVSAVTPFYYPFS----FEE-HCDHYRAIIDSADGLPMVVYNI 146 (303)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCC----HHH-HHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHhCCCCEEEecCCCCCCCC----HHH-HHHHHHHHHHhCCCCCEEEEeC
Confidence 3445677899999999999999872 111 22333344433 4 77877773
No 421
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.64 E-value=1.1e+02 Score=26.40 Aligned_cols=50 Identities=12% Similarity=0.250 Sum_probs=34.3
Q ss_pred EEEec-CCHHHHHHHHHc--CCCEEEEeCCCCcccccccCcCCh-hhHHHHHHHhcCceEEeccc
Q psy14815 396 MLTID-LTDEVLKEAVEN--GTDLIIAYHPPIFAPLKRVTNDKW-KERVVSTCLAHNIAVYSPHT 456 (479)
Q Consensus 396 l~~~d-~t~~~~~~a~~~--~~~~i~~~h~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~ 456 (479)
-+++| ..++++++|++. |+++|-.- ..... ..+.+..+.+.|+++..+|.
T Consensus 80 pisIDT~~~~v~~aal~a~~Ga~iINdv-----------s~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 80 PCCLDSTNPDAIEAGLKVHRGHAMINST-----------SADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp CEEEECSCHHHHHHHHHHCCSCCEEEEE-----------CSCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred eEEEeCCCHHHHHHHHHhCCCCCEEEEC-----------CCCccccHHHHHHHHHcCCCEEEEec
Confidence 34555 467888899998 99999542 22211 13566667788999999996
No 422
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=23.41 E-value=1.3e+02 Score=28.00 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=27.6
Q ss_pred HHHHHHHcCCC-EEEEeCCCCcccccccC---cCChhhHHHHHHHhcCc-eEEecccccc
Q psy14815 405 VLKEAVENGTD-LIIAYHPPIFAPLKRVT---NDKWKERVVSTCLAHNI-AVYSPHTTWD 459 (479)
Q Consensus 405 ~~~~a~~~~~~-~i~~~h~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~h~~~d 459 (479)
.++++.+.+.. ++++|||++-... ... ......+....|.+.++ .+++-|+=..
T Consensus 227 ~L~~~~~~~~~~Iv~~H~p~~~~~~-~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~ 285 (443)
T 2xmo_A 227 SSALAKKNGAKLIPVLHHNLTDHND-VIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQ 285 (443)
T ss_dssp HHHHHHHTTCEEEEECSSBSSCSSC-C--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred HHHHHHHcCCeEEEEECCCCccccc-ccccccccccHHHHHHHHHHcCCeEEEECCcccC
Confidence 33444444544 7888999865421 110 01123344444455677 5677787543
No 423
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=23.41 E-value=99 Score=27.11 Aligned_cols=48 Identities=21% Similarity=0.145 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|-+ +. ..+-+.++.+ .++.||-||-
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~~s~----~~-l~~~f~~va~a~~lPiilYn~ 142 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNKPTQ----QG-LYEHYKAIAQSVDIPVLLYNV 142 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCH----HH-HHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCH----HH-HHHHHHHHHHhCCCCEEEEeC
Confidence 34457888999999999999998721 11 2233333433 3788887773
No 424
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.99 E-value=1.1e+02 Score=26.75 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=36.1
Q ss_pred EEEEecCC-HHHHHHHHH--cCCCEEEEeCCCCcccccccCcCChh---hHHHHHHHhcCceEEecccc
Q psy14815 395 IMLTIDLT-DEVLKEAVE--NGTDLIIAYHPPIFAPLKRVTNDKWK---ERVVSTCLAHNIAVYSPHTT 457 (479)
Q Consensus 395 il~~~d~t-~~~~~~a~~--~~~~~i~~~h~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~h~~ 457 (479)
+-+++|-+ ++++++|++ .|+++|= ++...... .+++..+.+.|.++..+|..
T Consensus 85 vpisIDT~~~~V~eaaL~~~~Ga~iIN-----------dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d 142 (300)
T 3k13_A 85 VPVMIDSSKWEVIEAGLKCLQGKSIVN-----------SISLKEGEEVFLEHARIIKQYGAATVVMAFD 142 (300)
T ss_dssp SCEEEECSCHHHHHHHHHHCSSCCEEE-----------EECSTTCHHHHHHHHHHHHHHTCEEEEESEE
T ss_pred CeEEEeCCCHHHHHHHHHhcCCCCEEE-----------eCCcccCChhHHHHHHHHHHhCCeEEEEeeC
Confidence 34566654 688889998 7999883 34433211 25666777899999999973
No 425
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.80 E-value=72 Score=27.85 Aligned_cols=50 Identities=12% Similarity=0.086 Sum_probs=32.0
Q ss_pred CHHHH---HHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-CceEEeccc
Q psy14815 402 TDEVL---KEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-NIAVYSPHT 456 (479)
Q Consensus 402 t~~~~---~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~ 456 (479)
|.+++ ++|.+.|+|.++.--|++++|- .+ ...+-+..+.++ ++.|+-||-
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s----~~-~l~~~f~~ia~a~~lPiilYn~ 135 (292)
T 2ojp_A 82 TAEAISLTQRFNDSGIVGCLTVTPYYNRPS----QE-GLYQHFKAIAEHTDLPQILYNV 135 (292)
T ss_dssp HHHHHHHHHHTTTSSCSEEEEECCCSSCCC----HH-HHHHHHHHHHTTCSSCEEEECC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCC----HH-HHHHHHHHHHHhcCCCEEEEeC
Confidence 44554 4566789999999999999872 11 122333444443 688888773
No 426
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=22.79 E-value=4.2e+02 Score=23.85 Aligned_cols=248 Identities=14% Similarity=0.130 Sum_probs=126.4
Q ss_pred eEEEeecCCcEEEecCCCCCC-------ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC--------
Q psy14815 57 SLRQLVEDKNIRLWGKESFGN-------KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-------- 121 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~-------~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-------- 121 (479)
..+....++.+..|-....+. ..........-....+..++++.-....+.-..||.|..|-...
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~ 143 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 143 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCC
Confidence 445567889999997554221 11111222222334566677776667777778899999996432
Q ss_pred -CeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc---------eeeeeeeeccccceeEEEEecC
Q psy14815 122 -GQFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE---------YECAAVINAHIQDVKKVRFHPF 190 (479)
Q Consensus 122 -~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~---------~~~~~~~~~~~~~v~~l~~~~~ 190 (479)
........+.. ....|..++.. ....+.-..+|.|..|-.....+ ..+..........|..++....
T Consensus 144 ~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g 221 (389)
T 3kci_A 144 RSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 221 (389)
T ss_dssp CCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCS
T ss_pred CccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCC
Confidence 01111112221 12256666554 34555666889999997643211 0111111111234666665433
Q ss_pred CCEEEEEEcCCcEEEEecCCccc--------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC
Q psy14815 191 DNILASASYDDTVKLFKEDKAEA--------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 262 (479)
....+.-..+|.|..|-...... ...+..........|..++.. ..+.+.-..||.|+.|-.....+.-.
T Consensus 222 ~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~ 299 (389)
T 3kci_A 222 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGH 299 (389)
T ss_dssp SCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCC
Confidence 35666677899999996542111 011111111112346666654 34555667899999997644322211
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
- .......+ ..+..-....|..++... ...+.-..||.|+.|=...
T Consensus 300 g---~~~~~~~P-~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 300 G---SDDHVRRP-RQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp S---SCCCEEEE-EECGGGTTCCEEEEEECS--SEEEEEETTCCEEEEECCT
T ss_pred C---CCccccCC-eEeccCCCCCEEEEEecc--CeEEEECCCCCEEEeeCCC
Confidence 0 00111111 222222234566666543 3444457789999996654
No 427
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.05 E-value=1e+02 Score=27.13 Aligned_cols=49 Identities=10% Similarity=0.118 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEecccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHTT 457 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~ 457 (479)
+..++|.+.|+|.++.--|++++|- .. ...+-+.++.+ .++.|+-|+-+
T Consensus 98 ~la~~A~~~Gadavlv~~P~y~~~s----~~-~l~~~f~~va~a~~lPiilYn~P 147 (306)
T 1o5k_A 98 KLVKQAEKLGANGVLVVTPYYNKPT----QE-GLYQHYKYISERTDLGIVVYNVP 147 (306)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCC----HH-HHHHHHHHHHTTCSSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCC----HH-HHHHHHHHHHHhCCCCEEEEeCc
Confidence 3455677899999999999999872 11 12233344444 36888877733
No 428
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=22.04 E-value=89 Score=29.14 Aligned_cols=52 Identities=17% Similarity=0.080 Sum_probs=37.3
Q ss_pred EEEEEecCC-HHHHHHHHH--cCCCE-EEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEecccc
Q psy14815 394 NIMLTIDLT-DEVLKEAVE--NGTDL-IIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTT 457 (479)
Q Consensus 394 ~il~~~d~t-~~~~~~a~~--~~~~~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 457 (479)
.+.+++|-. ++++++|++ .|+++ |=. +.. ....+++.-+.+.|+++..+|..
T Consensus 269 ~vpISIDT~~~~VaeaAL~~~aGa~i~IND-----------Vsg-~~d~~m~~v~a~~g~~vVlMh~~ 324 (442)
T 3mcm_A 269 KPLVSIDTRKLEVMQKILAKHHDIIWMIND-----------VEC-NNIEQKAQLIAKYNKKYVIIHNL 324 (442)
T ss_dssp CCEEEEECCCHHHHHHHHHHHGGGCCEEEE-----------CCC-TTHHHHHHHHHHHTCEEEEECC-
T ss_pred CCeEEEeCCCHHHHHHHHhhCCCCCEEEEc-----------CCC-CCChHHHHHHHHhCCeEEEECCC
Confidence 456777764 688999999 99999 733 322 12236677777899999999964
No 429
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.90 E-value=3.2e+02 Score=26.30 Aligned_cols=70 Identities=11% Similarity=0.173 Sum_probs=41.8
Q ss_pred eeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeee--eecCCCccEE-EEEEccCCCEEEEeeCCCeEEE
Q psy14815 182 VKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFA--TLKSHTSTVW-SLAFDRIGSRLATCSDDATVKI 251 (479)
Q Consensus 182 v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~~v~-~~~~~~~~~~l~s~~~dg~i~i 251 (479)
.++++.... -..++.|+.+|.|.-..+.........+. .+.....+|. .|.+++++.+|+.++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 455555442 35677889999876554442211101111 2223346775 8999999999999987765444
No 430
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=21.74 E-value=98 Score=26.99 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHhc-CceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAH-NIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|-+ +. ..+-+..+.++ ++.|+-||-
T Consensus 88 ~la~~a~~~Gadavlv~~P~y~~~~~----~~-l~~~f~~ia~a~~lPiilYn~ 136 (292)
T 3daq_A 88 QASIQAKALGADAIMLITPYYNKTNQ----RG-LVKHFEAIADAVKLPVVLYNV 136 (292)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCH----HH-HHHHHHHHHHHHCSCEEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCH----HH-HHHHHHHHHHhCCCCEEEEec
Confidence 34457888999999999999998722 11 12222333332 788887763
No 431
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.24 E-value=1.2e+02 Score=26.61 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|-+ +. ..+-+..+.+ .++.|+-||-
T Consensus 93 ~la~~a~~~Gadavlv~~P~y~~~~~----~~-l~~~f~~va~a~~lPiilYn~ 141 (297)
T 3flu_A 93 ALSQAAEKAGADYTLSVVPYYNKPSQ----EG-IYQHFKTIAEATSIPMIIYNV 141 (297)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCH----HH-HHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCH----HH-HHHHHHHHHHhCCCCEEEEEC
Confidence 44557889999999999999998721 11 1233334433 3788888874
No 432
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.96 E-value=1.1e+02 Score=26.09 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=33.2
Q ss_pred EEEec-CCHHHHHHHHHc--CCCEEEEeCCCCcccccccCcCChhhHHHHHHHhcCceEEecccc
Q psy14815 396 MLTID-LTDEVLKEAVEN--GTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTT 457 (479)
Q Consensus 396 l~~~d-~t~~~~~~a~~~--~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 457 (479)
.+++| ..++++++|++. |+++|-.-... .++..+++..+.+.|+++..+|..
T Consensus 71 pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~----------~d~~~~~~~~~a~~~~~vvlmh~~ 125 (262)
T 1f6y_A 71 TLCLDSTNIKAIEAGLKKCKNRAMINSTNAE----------REKVEKLFPLAVEHGAALIGLTMN 125 (262)
T ss_dssp EEEEECSCHHHHHHHHHHCSSCEEEEEECSC----------HHHHHHHHHHHHHTTCEEEEESCC
T ss_pred eEEEeCCCHHHHHHHHhhCCCCCEEEECCCC----------cccHHHHHHHHHHhCCcEEEEcCC
Confidence 34555 456778888887 88888442211 122235666677888888888863
No 433
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=20.94 E-value=1e+02 Score=26.80 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEecccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHTT 457 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~ 457 (479)
+..++|.+.|+|.++.--|++++|-+ +. ..+-+.++.+ .++.|+-||-+
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~~~----~~-l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 87 ELTKAAKDLGADAALLVTPYYNKPTQ----EG-LYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCH----HH-HHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCH----HH-HHHHHHHHHHhcCCCEEEEecc
Confidence 44557888999999999999998721 11 1233334433 37888887743
No 434
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.85 E-value=1.2e+02 Score=26.70 Aligned_cols=48 Identities=15% Similarity=0.141 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHHHHh-cCceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLA-HNIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++|- .. ...+-+..+.+ .++.|+-||-
T Consensus 102 ~la~~A~~~Gadavlv~~P~y~~~~----~~-~l~~~f~~ia~a~~lPiilYn~ 150 (304)
T 3cpr_A 102 ELAEAAASAGADGLLVVTPYYSKPS----QE-GLLAHFGAIAAATEVPICLYDI 150 (304)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCC----HH-HHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCC----HH-HHHHHHHHHHHhcCCCEEEEeC
Confidence 3455677899999999999998872 11 11223333333 3788887774
No 435
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=20.82 E-value=1e+02 Score=26.81 Aligned_cols=48 Identities=13% Similarity=0.014 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCCEEEEeCCCCcc-cccccCcCChhhHHHHHHHh-cCceEEeccc
Q psy14815 404 EVLKEAVENGTDLIIAYHPPIFA-PLKRVTNDKWKERVVSTCLA-HNIAVYSPHT 456 (479)
Q Consensus 404 ~~~~~a~~~~~~~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~ 456 (479)
+..++|.+.|+|.++.--|++++ |- ... ..+-+.++.+ .++.|+-|+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s----~~~-l~~~f~~va~a~~lPiilYn~ 131 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLP----EKF-LAKYYEEIARISSHSLYIYNY 131 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCC----HHH-HHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCC----HHH-HHHHHHHHHHhcCCCEEEEEC
Confidence 34556778999999999999998 51 111 1222333333 3678877773
Done!