RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14815
(479 letters)
>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions
including adaptor/regulatory modules in signal
transduction, pre-mRNA processing and cytoskeleton
assembly; typically contains a GH dipeptide 11-24
residues from its N-terminus and the WD dipeptide at its
C-terminus and is 40 residues long, hence the name WD40;
between GH and WD lies a conserved core; serves as a
stable propeller-like platform to which proteins can
bind either stably or reversibly; forms a propeller-like
structure with several blades where each blade is
composed of a four-stranded anti-parallel b-sheet;
instances with few detectable copies are hypothesized to
form larger structures by dimerization; each WD40
sequence repeat forms the first three strands of one
blade and the last strand in the next blade; the last
C-terminal WD40 repeat completes the blade structure of
the first WD40 repeat to create the closed ring
propeller-structure; residues on the top and bottom
surface of the propeller are proposed to coordinate
interactions with other proteins and/or small ligands; 7
copies of the repeat are present in this alignment.
Length = 289
Score = 187 bits (476), Expect = 8e-56
Identities = 97/343 (28%), Positives = 153/343 (44%), Gaps = 72/343 (20%)
Query: 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV 62
+TLKGH G V V+++P G ++++ D I++W L + +L+
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVW---------DLETGELLRTLK--- 48
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
GH +R+ A S G ++AS S D T +WD +G
Sbjct: 49 -------------------------GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG 83
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
EC TL GH + V SV +S +G+ L++ SRDK++ VW+V + +C + H V
Sbjct: 84 --ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV---ETGKCLTTLRGHTDWV 138
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
V F P +AS+S D T+KL+ + ATL HT V S+AF G +L +
Sbjct: 139 NSVAFSPDGTFVASSSQDGTIKLWDLRTGKC----VATLTGHTGEVNSVAFSPDGEKLLS 194
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
S D T+K+W + S KC+ TL G H + +++ L+A+
Sbjct: 195 SSSDGTIKLW---------------DLSTGKCLGTLRG-HENGVNSVAFSPDGYLLASGS 238
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
D IR++ D+ + + V T H V +AW+P
Sbjct: 239 EDGTIRVW---------DLRTGECVQT-LSGHTNSVTSLAWSP 271
Score = 156 bits (397), Expect = 3e-44
Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 46/249 (18%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+TL GH V +V+++P G ++SS DK I++W
Sbjct: 87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW-------------------------- 120
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
++ E+ T + GH + A+SP G F+AS+S D T +WD R+G
Sbjct: 121 -DV-----ETGKCLTTLR-----GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG-- 167
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+C ATL GH EV SV +S +G+ L + S D ++ +W++ C + H V
Sbjct: 168 KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK---CLGTLRGHENGVNS 224
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V F P +LAS S D T++++ E TL HT++V SLA+ G RLA+ S
Sbjct: 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECV----QTLSGHTNSVTSLAWSPDGKRLASGS 280
Query: 245 DDATVKIWK 253
D T++IW
Sbjct: 281 ADGTIRIWD 289
Score = 47.3 bits (113), Expect = 7e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
QTL GH V +++W+P G ++S D IR+W
Sbjct: 254 VQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288
>gnl|CDD|216697 pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family
contains several NIF3 (NGG1p interacting factor 3)
protein homologues. NIF3 interacts with the yeast
transcriptional coactivator NGG1p which is part of the
ADA complex, the exact function of this interaction is
unknown.
Length = 237
Score = 141 bits (358), Expect = 3e-39
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 359 DVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLII 418
+++ LE +AP SLAE WDNVGL + +K I++ +D T+EV++EA+ENG DLII
Sbjct: 1 EIIELLEELAPPSLAEDWDNVGLQVGDPE--GEVKKILVALDATEEVIEEAIENGADLII 58
Query: 419 AYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+HP IF PLKR+T D K R + + +NI++YS HT DA G
Sbjct: 59 THHPLIFKPLKRITGDDPKGRRILKLIKNNISLYSAHTNLDAAPGG 104
>gnl|CDD|223404 COG0327, COG0327, Uncharacterized conserved protein [Function
unknown].
Length = 250
Score = 116 bits (293), Expect = 7e-30
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 357 LHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDL 416
+ +++ LE P LAE WDN GL + +K + + +D T VL EA+E G DL
Sbjct: 3 VSELIELLEEFLPPELAEDWDNNGLQVGGPLEE--VKKVAVALDATLAVLDEAIELGADL 60
Query: 417 IIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+I +HP IF P+K + D K + + + ++I +Y+ HT DA EG
Sbjct: 61 LIVHHPLIFWPVKSLAIDGPKGKRIKALIQNDINLYAAHTNLDAHPEG 108
>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction
only].
Length = 466
Score = 114 bits (286), Expect = 1e-27
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 24/261 (9%)
Query: 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM----VIREPYEKLHGLPVE--TS 57
TL GH V +++++P G +I+S D IRLW + ++R V +
Sbjct: 192 STLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP 251
Query: 58 LRQLV----EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
L+ D IRLW S + GH ++ A+SP G +AS S D T
Sbjct: 252 DGSLLASGSSDGTIRLWDLRSSSSLLR----TLSGHSSSVLSVAFSPDGKLLASGSSDGT 307
Query: 114 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECA 172
+WD +G+ + TL+GHE V S+++S +G L + S D ++ +W++ +
Sbjct: 308 VRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKT- 366
Query: 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232
+V V F P +++S S D TV+L+ L HTS V SL
Sbjct: 367 ---LEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGS----LLRNLDGHTSRVTSLD 419
Query: 233 FDRIGSRLATCSDDATVKIWK 253
F G LA+ S D T+++W
Sbjct: 420 FSPDGKSLASGSSDNTIRLWD 440
Score = 112 bits (280), Expect = 8e-27
Identities = 92/390 (23%), Positives = 158/390 (40%), Gaps = 52/390 (13%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP----YEKLHGLPVETS 57
++S L+GH+ + +++++P G ++ S D I+LW + E E LH V
Sbjct: 56 LSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKL 115
Query: 58 LRQLVE-----------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA 106
+ D ++LW + G +GH ++ A+SP G +A
Sbjct: 116 ALSSPDGNSILLASSSLDGTVKLWDLSTPGKL----IRTLEGHSESVTSLAFSPDGKLLA 171
Query: 107 SAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVG 164
S S D T +WD R+G + +TL GH + V S+ +S +G +A+ S D ++ +W++
Sbjct: 172 SGSSLDGTIKLWDLRTG--KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL- 228
Query: 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224
+ ++ H V F P ++LAS S D T++L+ + TL H
Sbjct: 229 -STGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWD---LRSSSSLLRTLSGH 283
Query: 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 284
+S+V S+AF G LA+ S D TV++W TL GH
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDL-------------ETGKLLSSLTLKGH-EG 329
Query: 285 TIYDISWCHLTDLIATACGDDA-IRIF--------KENPEAGDSDMVSFDLVHTEHRAHN 335
+ +S+ L+ + DD IR++ K + VSF + +
Sbjct: 330 PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGS 389
Query: 336 QDVNCVAWNPVVPEPQKTNLTLHDVVRRLE 365
D W+ + V L+
Sbjct: 390 TDGTVRLWDLSTGSLLRNLDGHTSRVTSLD 419
Score = 104 bits (259), Expect = 5e-24
Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 47/311 (15%)
Query: 41 VIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 100
+ L L L+ D + L S +L GH+ +I A+SP
Sbjct: 25 LNSLSLLSLGSSESGILLLALLSDSLVSLPDLSS---------LLLRGHEDSITSIAFSP 75
Query: 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW-SKNGQFLATC--SRDKS 157
G + S S D T +WD +G+ + H++ V + S +G + S D +
Sbjct: 76 DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGT 135
Query: 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWI 216
V +W++ + + H + V + F P +LAS S D T+KL+ +
Sbjct: 136 VKLWDL--STPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK---- 189
Query: 217 NFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275
+TL HT V SLAF G +A+ S D T+++W + S K +
Sbjct: 190 PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW---------------DLSTGKLL 234
Query: 276 -CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 334
TLSGH + S+ L+A+ D IR++ D+ S + H
Sbjct: 235 RSTLSGHSDSVV--SSFSPDGSLLASGSSDGTIRLW---------DLRSSSSLLRTLSGH 283
Query: 335 NQDVNCVAWNP 345
+ V VA++P
Sbjct: 284 SSSVLSVAFSP 294
Score = 75.5 bits (184), Expect = 1e-14
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
+TL GH V +V+++P G +++S D +RLW
Sbjct: 277 LRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW------------------------- 311
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSG 122
++ GH+ + ++SP G+ + S S D T +WD R+G
Sbjct: 312 ----------DLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+ + V SV++S +G+ +++ S D +V +W++ ++ H V
Sbjct: 362 K---PLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDL---STGSLLRNLDGHTSRV 415
Query: 183 KKVRFHPFDNILASASYDDTVKLFK 207
+ F P LAS S D+T++L+
Sbjct: 416 TSLDFSPDGKSLASGSSDNTIRLWD 440
Score = 57.8 bits (138), Expect = 5e-09
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGL-------- 52
++S TLKGH+G V ++S++P G+++ S +D IRLW + +P + L G
Sbjct: 319 LSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSF 378
Query: 53 -PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 111
P + D +RLW + DGH + +SP G +AS S D
Sbjct: 379 SPDGRVVSSGSTDGTVRLWDLSTGSLLRN-----LDGHTSRVTSLDFSPDGKSLASGSSD 433
Query: 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158
T +WD ++ +KSV++S +G+ LA+ S D SV
Sbjct: 434 NTIRLWDLKT--------------SLKSVSFSPDGKVLASKSSDLSV 466
>gnl|CDD|213534 TIGR00486, YbgI_SA1388, dinuclear metal center protein, YbgI/SA1388
family. The characterization of this family of
uncharacterized proteins as orthologous is tentative.
Members are found in all three domains of life. Several
members (from Bacillus subtilis, Listeria monocytogenes,
and Mycobacterium tuberculosis - all classified as
Firmicutes within the Eubacteria) share a long insert
relative to other members [Unknown function, General].
Length = 249
Score = 102 bits (255), Expect = 1e-24
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 359 DVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLII 418
++++ + P LAE DN GL + N +K +++ +D ++ V EAV G DLII
Sbjct: 5 ELIQLINRFLPKELAEDGDNNGLQVGSGNEE--VKKVVVAVDASESVADEAVRLGADLII 62
Query: 419 AYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+HP I+ PLKR+ R + L ++I++YS HT DA G
Sbjct: 63 THHPLIWKPLKRLIRGIKPGR-LKILLQNDISLYSAHTNLDAHDGG 107
>gnl|CDD|197651 smart00320, WD40, WD40 repeats. Note that these repeats are
permuted with respect to the structural repeats (blades)
of the beta propeller domain.
Length = 40
Score = 50.4 bits (121), Expect = 1e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162
E TL+GH V SV +S +G++LA+ S D ++ +W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
Score = 46.9 bits (112), Expect = 2e-07
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+TLKGH G V +V+++P G ++S +D I+LW
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
Score = 45.8 bits (109), Expect = 5e-07
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
TLK HT V S+AF G LA+ SDD T+K+W
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
Score = 38.8 bits (91), Expect = 2e-04
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
E + H V V F P LAS S D T+KL+
Sbjct: 3 ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
Score = 36.1 bits (84), Expect = 0.001
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
GH + A+SP G ++AS S D T +WD
Sbjct: 9 KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
Score = 35.8 bits (83), Expect = 0.002
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 272 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311
+ + TL GH G + +++ +A+ D I+++
Sbjct: 2 GELLKTLKGHTGP-VTSVAFSPDGKYLASGSDDGTIKLWD 40
>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat.
Length = 39
Score = 48.9 bits (117), Expect = 4e-08
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161
+ TL+GH V SV +S +G LA+ S D +V VW
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
Score = 47.3 bits (113), Expect = 1e-07
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+TLKGH G V +V+++P G +++S +D +R+W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
Score = 46.2 bits (110), Expect = 4e-07
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
TLK HT V S+AF G+ LA+ SDD TV++W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
Score = 38.5 bits (90), Expect = 2e-04
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + H V V F P N+LAS S D TV+++
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
Score = 36.2 bits (84), Expect = 0.001
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
GH + A+SP GN +AS S D T VWD
Sbjct: 8 KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
Score = 34.3 bits (79), Expect = 0.005
Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 272 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311
K + TL GH G + +++ +L+A+ D +R++
Sbjct: 1 GKLLRTLKGHTGP-VTSVAFSPDGNLLASGSDDGTVRVWD 39
>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional.
Length = 493
Score = 47.2 bits (112), Expect = 1e-05
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 25/175 (14%)
Query: 132 GHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED-EYECAAVI---NAHIQDVKKVR 186
G E + V ++ + Q L T S D ++ W + EE + I H + V V
Sbjct: 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVS 132
Query: 187 FHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245
FHP N+LASA D V ++ ++ +A +K H+ + SL ++ GS L T S
Sbjct: 133 FHPSAMNVLASAGADMVVNVWDVERGKAV----EVIKCHSDQITSLEWNLDGSLLCTTSK 188
Query: 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
D + I P + V ++ H W DLI T
Sbjct: 189 DKKLNI---IDPRDG------------TIVSSVEAHASAKSQRCLWAKRKDLIIT 228
Score = 38.3 bits (89), Expect = 0.009
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 34/158 (21%)
Query: 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
N L G +G + +V++NP + + ED I W G+P E L Q
Sbjct: 67 NPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGW------------GIPEE-GLTQN 113
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKR 120
+ D + L GH + + ++ P N +ASA D VWD
Sbjct: 114 ISDPIVHL-----------------QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVE 156
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158
G+ ++ H +++ S+ W+ +G L T S+DK +
Sbjct: 157 RGK--AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKL 192
>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional.
Length = 568
Score = 42.6 bits (100), Expect = 4e-04
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 43/153 (28%)
Query: 7 LKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDK 65
LKGH + ++ +NP +++S ED IR+W E H D+
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVW--------EIPH------------NDE 109
Query: 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWD----KR 120
++ + + GH++ I W+P +I S+ FD+ +WD KR
Sbjct: 110 SV---------KEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR 160
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLA-TC 152
+ F+ N ++ S+ W+ G L+ TC
Sbjct: 161 A--FQINMP-----KKLSSLKWNIKGNLLSGTC 186
Score = 40.3 bits (94), Expect = 0.002
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 221 LKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---- 275
LK HTS++ L F+ S LA+ S+D T+++W+ P ND K +
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWE-----------IPHNDESVKEIKDPQ 118
Query: 276 CTLSGHHGRTIYDISWCHLTDLIATACGDDA 306
C L GH + I I W + I + G D+
Sbjct: 119 CILKGHK-KKISIIDWNPMNYYIMCSSGFDS 148
Score = 36.9 bits (85), Expect = 0.027
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 147 QFLATCSRDKSVWVWEVGEEDE-----YECAAVINAHIQDVKKVRFHPFDN-ILASASYD 200
+ LA+ S D ++ VWE+ DE + ++ H + + + ++P + I+ S+ +D
Sbjct: 88 EILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD 147
Query: 201 DTVKLFK-EDKAEADWINFATLKSHTSTVWSL 231
V ++ E++ A IN K +S W++
Sbjct: 148 SFVNIWDIENEKRAFQINMP--KKLSSLKWNI 177
>gnl|CDD|236429 PRK09248, PRK09248, putative hydrolase; Validated.
Length = 246
Score = 33.7 bits (78), Expect = 0.17
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Query: 377 DNVGLL--IEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIA-YHPPIFAPLKRVTN 433
D VG+L IE +IKN IDL ++LK+ D++IA +H P+FAP + TN
Sbjct: 65 DGVGILRGIE-----ANIKNYDGEIDLPGDMLKK-----LDIVIAGFHEPVFAPGDKETN 114
>gnl|CDD|149648 pfam08662, eIF2A, Eukaryotic translation initiation factor eIF2A.
This is a family of eukaryotic translation initiation
factors.
Length = 194
Score = 33.0 bits (76), Expect = 0.17
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 13/73 (17%)
Query: 98 WSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154
WSP G + A F WD ++ + AT E N WS +G++ T +
Sbjct: 108 WSPFGRLVLLAGFGNLAGQIEFWDVKN--KKKIATAE-ASNAT-DCEWSPDGRYFLTATT 163
Query: 155 ------DKSVWVW 161
D +W
Sbjct: 164 SPRLRVDNGFKIW 176
>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional.
Length = 793
Score = 33.9 bits (77), Expect = 0.22
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 135 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN----AHIQDVKKVRFHPF 190
N V ++ + ++G+F AT +K + + +EC ++I H V+
Sbjct: 484 NLVCAIGFDRDGEFFATAGVNKKIKI--------FECESIIKDGRDIHYPVVELASRSKL 535
Query: 191 DNI---------LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRL 240
I +AS++++ V+++ D A + + +K H VWS+ + + L
Sbjct: 536 SGICWNSYIKSQVASSNFEGVVQVW--DVARSQLVT--EMKEHEKRVWSIDYSSADPTLL 591
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286
A+ SDD +VK+W + + I T N C GR++
Sbjct: 592 ASGSDDGSVKLWSINQGVSIGTIKTKAN----ICCVQFPSESGRSL 633
Score = 32.8 bits (74), Expect = 0.43
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 105 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163
+AS++F+ VWD Q ++ HE V S+ +S + LA+ S D SV +W +
Sbjct: 548 VASSNFEGVVQVWDVARSQLV--TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605
Query: 164 GEEDEYECAAVINAHIQ---DVKKVRFHPFDN--ILASASYDDTVKLFKEDKAEADWINF 218
+ V I+ ++ V+F P ++ LA S D V + + +
Sbjct: 606 NQ-------GVSIGTIKTKANICCVQF-PSESGRSLAFGSADHKVYYYDLRNPK---LPL 654
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252
T+ H+ TV + F S L + S D T+K+W
Sbjct: 655 CTMIGHSKTVSYVRFVD-SSTLVSSSTDNTLKLW 687
>gnl|CDD|179892 PRK04922, tolB, translocation protein TolB; Provisional.
Length = 433
Score = 33.5 bits (77), Expect = 0.27
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Query: 86 SDGHQ-RTIRET-------AWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHE 134
SDG+ +TI + AWSP G +A SF+ + V D +GQ E A+ G
Sbjct: 191 SDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG-I 249
Query: 135 NEVKSVTWSKNGQFLA-TCSRD 155
N S +S +G+ LA T SRD
Sbjct: 250 NGAPS--FSPDGRRLALTLSRD 269
>gnl|CDD|182741 PRK10799, PRK10799, metal-binding protein; Provisional.
Length = 247
Score = 32.0 bits (73), Expect = 0.55
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 15/77 (19%)
Query: 391 HIKNIMLTIDLTDEVLKEAVENGTDLIIAYH-------PPIFAPLKRVTNDKWKERVVST 443
++ I+ + + +L EAV D +I +H P+ +KR + T
Sbjct: 34 TVQKIVTGVTASQALLDEAVRLQADAVIVHHGYFWKGESPVIRGMKR--------NRLKT 85
Query: 444 CLAHNIAVYSPHTTWDA 460
LA++I +Y H DA
Sbjct: 86 LLANDINLYGWHLPLDA 102
>gnl|CDD|219603 pfam07842, GCFC, GC-rich sequence DNA-binding factor-like protein.
Sequences found in this family are similar to a region
of a human GC-rich sequence DNA-binding factor homolog.
This is thought to be a protein involved in
transcriptional regulation due to partial homologies to
a transcription repressor and histone-interacting
protein. This family also contains tuftelin interacting
protein 11 which has been identified as both a nuclear
and cytoplasmic protein, and has been implicated in the
secretory pathway. Sip1, a septin interacting protein is
also a member of this family.
Length = 275
Score = 30.9 bits (70), Expect = 1.2
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 332 RAHNQDVNCV-AWNPVVPEPQKTNLTLHDVVRRLEAMA----PLSLAEPWDNVGLLIE-- 384
R + +N + AW P++P N+ V+ +L A PLS V +
Sbjct: 103 RDPDPMLNLLEAWAPLLPSFILDNILEQLVLPKLTAAVEEWDPLSDTVTRHLVPIHSWVF 162
Query: 385 ---PHNTTKHIKNIMLTI 399
P ++ + I
Sbjct: 163 PWLPLLGEARLEPLYPAI 180
>gnl|CDD|227086 COG4743, COG4743, Predicted membrane protein [Function unknown].
Length = 316
Score = 30.3 bits (68), Expect = 2.5
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 2 INSQTLKGHQGRVW----NVSWNPQGTMISSCGEDKNIRLWVMVIRE-----PYEKLHG 51
+N T + ++ NV+ I KN +L ++ ++ PY LH
Sbjct: 253 LNFTTNETGIHEMYLMDFNVTLPEIPVNIEITLPGKNWKLEFLLFKDPEPEIPYRSLHL 311
>gnl|CDD|179329 PRK01742, tolB, translocation protein TolB; Provisional.
Length = 429
Score = 29.8 bits (67), Expect = 3.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 97 AWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGH 133
AWSP G+ +A SF+ + V D RSG + A+ GH
Sbjct: 210 AWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH 249
>gnl|CDD|211379 cd09268, FCHo1_MHD, mu-homology domain (MHD) of F-BAR
domain-containing Fer/Cip4 homology domain-only protein
1 (FCH domain only 1 or FCHo1, also known as KIAA0290)
and similar proteins. This family corresponds to the
MHD found in ubiquitously expressed mammalian
membrane-sculpting FCHo1 and similar proteins. FCHo1
represents a key initial protein that ultimately
controls cellular nutrient uptake, receptor regulation,
and synaptic vesicle retrieval. It is required for
plasma membrane clathrin-coated vesicle (CCV) budding
and marks sites of CCV formation. It binds specifically
to the plasma membrane and recruits the scaffold
proteins eps15 and intersectin, which subsequently
engage the adaptor complex AP2 and clathrin, leading to
coated vesicle formation. FCHo1 contains an N-terminal
EFC/F-BAR domain, a proline-rich domain (PRD) in the
middle region, and a C-terminal MHD. The crescent-shaped
EFC/F-BAR domain can form an antiparallel dimer
structure that binds PtdIns(4,5)P2-enriched membranes
and can polymerize into rings to generate membrane
tubules. The MHD is structurally related to the
cargo-binding mu2 subunit of adaptor complex 2 (AP-2)
and is responsible for the binding of eps15 and
intersectin. Unlike other F-BAR domain containing
proteins, FCHo1 has neither the Src homology 3 (SH3)
domain nor any other known domain for interaction with
dynamin and actin cytoskeleton. However, it can
periodically accumulate at the budding site of clathrin.
FCHo1 may utilize a unique action mode for vesicle
formation as compared with other F-BAR proteins.
Length = 259
Score = 29.6 bits (66), Expect = 3.8
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 307 IRIFKENPEAGDSDMVSFDLVHT---EHRAHNQDVNCVAWNPVVPEPQKTNLTLHDVVRR 363
+R+F P ++SF LVHT EH A N ++ + P + L + +
Sbjct: 39 LRVFASTPTP---PVLSFRLVHTSHVEHFAPNSELLFSDPSQSDPNTKDFWLNMPALTSY 95
Query: 364 LEAMAPLSLAEPWDNVGLL 382
L+ MA + + NV LL
Sbjct: 96 LQRMAEQNPQASYYNVTLL 114
>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein
Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase
4. Serine/threonine kinases (STKs), yeast
Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic
(c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The YSK4 subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. YSK4 is a
putative MAPKKK, whose mammalian gene has been isolated.
MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate
MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn
phosphorylate and activate MAPKs during signaling
cascades that are important in mediating cellular
responses to extracellular signals.
Length = 265
Score = 29.5 bits (66), Expect = 3.9
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 19/90 (21%)
Query: 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230
C + VK+V + + A Y+ KL +E LKS
Sbjct: 18 CGLTNQGQLIAVKQVELDTSNVLAAEKEYE---KLQEE---------VDLLKS------- 58
Query: 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNS 260
L I L TC DD T+ I+ E+ PG S
Sbjct: 59 LKHVNIVQYLGTCLDDNTISIFMEFVPGGS 88
>gnl|CDD|191810 pfam07679, I-set, Immunoglobulin I-set domain.
Length = 90
Score = 27.2 bits (61), Expect = 6.2
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 14/60 (23%)
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDK--------SVWVWEVGEEDE--YECAA 173
F C T + +V+W K+GQ L + R K ++ + V +DE Y C A
Sbjct: 20 FTCTVT----GDPDPTVSWFKDGQPLRSSDRFKVTYEGGTYTLTISNVQPDDEGKYTCVA 75
>gnl|CDD|235237 PRK04169, PRK04169, geranylgeranylglyceryl phosphate synthase-like
protein; Reviewed.
Length = 232
Score = 28.6 bits (65), Expect = 6.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 401 LTDEVLKEAVENGTDLII 418
L DE L+ E+GTD II
Sbjct: 20 LPDEALEAICESGTDAII 37
>gnl|CDD|234019 TIGR02800, propeller_TolB, tol-pal system beta propeller repeat
protein TolB. Members of this protein family are the
TolB periplasmic protein of Gram-negative bacteria. TolB
is part of the Tol-Pal (peptidoglycan-associated
lipoprotein) multiprotein complex, comprising five
envelope proteins, TolQ, TolR, TolA, TolB and Pal, which
form two complexes. The TolQ, TolR and TolA
inner-membrane proteins interact via their transmembrane
domains. The {beta}-propeller domain of the periplasmic
protein TolB is responsible for its interaction with
Pal. TolB also interacts with the outer-membrane
peptidoglycan-associated proteins Lpp and OmpA. TolA
undergoes a conformational change in response to changes
in the proton-motive force, and interacts with Pal in an
energy-dependent manner. The C-terminal periplasmic
domain of TolA also interacts with the N-terminal domain
of TolB. The Tol-PAL system is required for bacterial
outer membrane integrity. E. coli TolB is involved in
the tonB-independent uptake of group A colicins
(colicins A, E1, E2, E3 and K), and is necessary for the
colicins to reach their respective targets after initial
binding to the bacteria. It is also involved in uptake
of filamentous DNA. Study of its structure suggest that
the TolB protein might be involved in the recycling of
peptidoglycan or in its covalent linking with
lipoproteins. The Tol-Pal system is also implicated in
pathogenesis of E. coli, Haemophilus ducreyi ,
Salmonella enterica and Vibrio cholerae, but the
mechanism(s) is unclear [Transport and binding proteins,
Other, Cellular processes, Pathogenesis].
Length = 417
Score = 28.8 bits (65), Expect = 7.1
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 86 SDGH-QRTI---RET----AWSPCGNFIASASFDATTA---VWDKRSGQFECNATLEGHE 134
DG +TI RE AWSP G +A SF++ V D +GQ E A+ G
Sbjct: 177 YDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGM- 235
Query: 135 NEVKSVTWSKNGQFLA-TCSRD 155
+ +S +G LA + S+D
Sbjct: 236 --NGAPAFSPDGSKLAVSLSKD 255
>gnl|CDD|234897 PRK01096, PRK01096, deoxyguanosinetriphosphate
triphosphohydrolase-like protein; Provisional.
Length = 440
Score = 28.7 bits (65), Expect = 7.2
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 17/61 (27%)
Query: 280 GHHGRTIYDISWCHLTDL---IATAC-------------GDDAIRI-FKENPEAGDSDMV 322
G + W D+ + +AC G+DAIR F++ G D +
Sbjct: 81 GETLKEEKLPDWISPADIGAIVQSACLAHDIGNPPFGHFGEDAIREWFQDAAGRGFLDDL 140
Query: 323 S 323
S
Sbjct: 141 S 141
>gnl|CDD|238620 cd01295, AdeC, Adenine deaminase (AdeC) directly deaminates adenine
to form hypoxanthine. This reaction is part of one of
the adenine salvage pathways, as well as the degradation
pathway. It is important for adenine utilization as a
purine, as well as a nitrogen source in bacteria and
archea.
Length = 422
Score = 28.7 bits (65), Expect = 7.9
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 14/78 (17%)
Query: 356 TLHDVVRRLEAMAPLSLAE--PWDNVGLLIEPHNTTKHIKNIMLTID-----------LT 402
T + + +L + L E N+ L+ P T K+ + M D
Sbjct: 165 TGEEALEKLRLGMYVMLREGSIAKNLEALL-PAITEKNFRRFMFCTDDVHPDDLLSEGHL 223
Query: 403 DEVLKEAVENGTDLIIAY 420
D +++ A+E G A
Sbjct: 224 DYIVRRAIEAGIPPEDAI 241
>gnl|CDD|234516 TIGR04236, seadorna_VP2, seadornavirus VP2 protein. This protein
family occurs in the seadornavirus virus group, with the
designation VP2 in Banna virus, Kadipiro virus, and Liao
ning virus.
Length = 953
Score = 28.7 bits (64), Expect = 7.9
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 359 DVVRRLEAMAPLSLAEPWDNV--GLLIEP---HNTTKHIKNIMLTIDLTDEVLKEAVEN 412
DVV R ++ P LAE DN+ I P + + + T + D + K A E
Sbjct: 615 DVVSRYRSLIPNELAESLDNIRGEYNINPQDEVSYFFALARVNFTDEFIDAIDKMAAEY 673
>gnl|CDD|226301 COG3778, COG3778, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 188
Score = 27.9 bits (62), Expect = 9.4
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 12/84 (14%)
Query: 190 FDNILASASYDDTVKLFKEDKAEAD------------WINFATLKSHTSTVWSLAFDRIG 237
F I A+A YD T+ + +A W+ + + T + D G
Sbjct: 98 FIRIAAAAGYDITITEYDPFRAGVSRCTDALNPQEWMWVWHVNIPATTIYRFMTCLDDAG 157
Query: 238 SRLATCSDDATVKIWKEYKPGNSA 261
L D + KP ++
Sbjct: 158 DPLRIYEDKVLECLLNRLKPAHTY 181
>gnl|CDD|218251 pfam04762, IKI3, IKI3 family. Members of this family are
components of the elongator multi-subunit component of a
novel RNA polymerase II holoenzyme for transcriptional
elongation. This region contains WD40 like repeats.
Length = 903
Score = 28.4 bits (64), Expect = 9.8
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 97 AWSPCGNFIASA--SFDATTAVWDKRSG----QFECNATLEGHENEVKSVTWSKNGQFLA 150
+W P GN IAS D V+ +R+G +F E +V S+ W+ + + LA
Sbjct: 249 SWRPSGNLIASIQRLPDRLDVVFFERNGLRHGEFT---LRLPEEEKVISLEWNSDSEVLA 305
Query: 151 TCSRDKSVWVWEVG 164
D+ V +W G
Sbjct: 306 VSLEDR-VQLWTTG 318
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.132 0.422
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 24,226,078
Number of extensions: 2278035
Number of successful extensions: 2119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2024
Number of HSP's successfully gapped: 59
Length of query: 479
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 378
Effective length of database: 6,457,848
Effective search space: 2441066544
Effective search space used: 2441066544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (27.3 bits)