RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14815
(479 letters)
>d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus
cereus [TaxId: 1396]}
Length = 370
Score = 134 bits (337), Expect = 9e-36
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 356 TLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTD 415
H+++ E+M P LA D +GL I K ++++++ +D+T+EV+ EA++ G +
Sbjct: 3 NGHEIISLFESMYPKHLAMEGDKIGLQIG--ALNKPVRHVLIALDVTEEVVDEAIQLGAN 60
Query: 416 LIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+IIA+HP IF PLK + DK +++ C+ ++IA+Y+ HT D + G
Sbjct: 61 VIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAAHTNVDVAKGG 109
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 116 bits (290), Expect = 8e-30
Identities = 67/332 (20%), Positives = 124/332 (37%), Gaps = 50/332 (15%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-----LPVETSLR 59
L GH+ V V ++P +++ S ED I++W + L G +
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 119
+ + + + GH + + P G+ I SAS D T +W+
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179
++G T GH V+ V +++G +A+CS D++V VW V EC A + H
Sbjct: 131 QTGYCVK--TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELREHR 185
Query: 180 QDVKKVRFH--------------------PFDNILASASYDDTVKLFKEDKAEADWINFA 219
V+ + + L S S D T+K++
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LM 241
Query: 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279
TL H + V + F G + +C+DD T+++W + +C+ TL+
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW---------------DYKNKRCMKTLN 286
Query: 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311
H + + + + T D +++++
Sbjct: 287 AHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 82.9 bits (203), Expect = 4e-18
Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 23/262 (8%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147
GH+ + + P + + SAS DAT VWD +G TL+GH + V+ +++ +G+
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGK 72
Query: 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + ++ + +EC ++ H +V V P + + SAS D T+K+++
Sbjct: 73 L---LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 208 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 267
T H V + ++ G+ +A+CS+D TV++W A +
Sbjct: 130 VQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 185
Query: 268 ND----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323
+ S S + + D I+++ D+ +
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW---------DVST 236
Query: 324 FDLVHTEHRAHNQDVNCVAWNP 345
+ T H+ V V ++
Sbjct: 237 GMCLMT-LVGHDNWVRGVLFHS 257
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 265
Score = 114 bits (287), Expect = 1e-29
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGT 414
+ +V++ EA P + D+ GL I K I+ +M+ +D+ +E + EA+E G
Sbjct: 1 MLASEVIQAYEAFCPQEFSMEGDSRGLQIG--TLDKGIQRVMVALDIREETVAEAIEKGV 58
Query: 415 DLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
DLII H PIF P+K + + + ++ + H+IAVY HT D ++ G
Sbjct: 59 DLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENG 108
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 102 bits (254), Expect = 1e-24
Identities = 52/256 (20%), Positives = 92/256 (35%), Gaps = 15/256 (5%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV--------MVIREPYEKLHGLPVET 56
+ V ++ P G ++ G D ++ V RE L
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150
Query: 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
L + + + + GH + + +P S + DA+ +
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 117 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN 176
WD R G C T GHE+++ ++ + NG AT S D + ++++ + E + N
Sbjct: 211 WDVREGM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 177 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236
I + V F +L + D ++ KA+ L H + V L
Sbjct: 269 -IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----RAGVLAGHDNRVSCLGVTDD 323
Query: 237 GSRLATCSDDATVKIW 252
G +AT S D+ +KIW
Sbjct: 324 GMAVATGSWDSFLKIW 339
Score = 100 bits (249), Expect = 5e-24
Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 27/312 (8%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVE-TSLRQLVE 63
+TL+GH +++ + W ++ S +D + +W + +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----- 118
+ G ++ + + K + T+ D
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168
Query: 119 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH 178
+ T GH +V S++ + + + + + D S +W+V E C H
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV---REGMCRQTFTGH 225
Query: 179 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238
D+ + F P N A+ S D T +LF + + + S++F + G
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGITSVSFSKSGR 283
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298
L DD +W K L+GH R + + +
Sbjct: 284 LLLAGYDDFNCNVWDALK---------------ADRAGVLAGHDNR-VSCLGVTDDGMAV 327
Query: 299 ATACGDDAIRIF 310
AT D ++I+
Sbjct: 328 ATGSWDSFLKIW 339
Score = 64.8 bits (156), Expect = 4e-12
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 17/126 (13%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
QT GH+ + + + P G ++ +D RL+ + + + + +
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Query: 63 ----------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 112
+D N +W GH + + G +A+ S+D+
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLA-----GHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 113 TTAVWD 118
+W+
Sbjct: 335 FLKIWN 340
Score = 62.4 bits (150), Expect = 2e-11
Identities = 36/236 (15%), Positives = 68/236 (28%), Gaps = 30/236 (12%)
Query: 110 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169
T + Q TL GH ++ ++ W + + L + S+D + +W+
Sbjct: 31 SQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDS---YTT 87
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229
I V + P N +A D+ ++ E + L HT +
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS 147
Query: 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289
F + + D E T H + +
Sbjct: 148 CCRFLDDNQIVTSSGDTTCALWDIE-----------------TGQQTTTFTGHTGDVMSL 190
Query: 290 SWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
S T L + D + +++ D+ T H D+N + + P
Sbjct: 191 SLAPDTRLFVSGACDASAKLW---------DVREGMCRQT-FTGHESDINAICFFP 236
>d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli
[TaxId: 562]}
Length = 247
Score = 97.8 bits (243), Expect = 9e-24
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGT 414
+ ++ + + + + GL +E + ++ I+ + + +L EAV G
Sbjct: 1 MKNTELEQLINEKLNSAAISDYAPNGLQVEG---KETVQKIVTGVTASQALLDEAVRLGA 57
Query: 415 DLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
D +I +H + V K + T LA++I +Y H DA E
Sbjct: 58 DAVIVHHGYFWKGESPVIRG-MKRNRLKTLLANDINLYGWHLPLDAHPEL 106
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 100 bits (248), Expect = 1e-23
Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 29/277 (10%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
+N+ + + +V ++P G +++ ED+ IR+W + R+ L G +
Sbjct: 112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY 171
Query: 62 VEDKNIRLWGKESFGNKFT-----AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
+ + G + ++ G +IA+ S D V
Sbjct: 172 FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV 231
Query: 117 WDKRSGQFEC-----NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--- 168
WD +G N + GH++ V SV ++++GQ + + S D+SV +W + +
Sbjct: 232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 291
Query: 169 ------YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK 222
C H V V D + S S D V + + L+
Sbjct: 292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP----LLMLQ 347
Query: 223 SHTSTVWSLA------FDRIGSRLATCSDDATVKIWK 253
H ++V S+A + AT S D +IWK
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 90.2 bits (222), Expect = 3e-20
Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 42/349 (12%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
+ H V V ++ G +++ G +K +++ + +L
Sbjct: 53 VELHKSLDHTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSD---------- 101
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ + S IR +SP G F+A+ + D +WD +
Sbjct: 102 ---------DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
+ + S + + R +W G+
Sbjct: 153 RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-----EDGV 207
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGS 238
+A+ S D V+++ + + H +V+S+ F R G
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 267
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298
+ + S D +VK+W N + TP++ + H + ++ + I
Sbjct: 268 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI----GHKDFVLSVATTQNDEYI 323
Query: 299 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
+ D + + D S + + + H V VA
Sbjct: 324 LSGSKDRGVLFW---------DKKSGNPLLM-LQGHRNSVISVAVANGS 362
Score = 76.0 bits (185), Expect = 1e-15
Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 33/166 (19%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
+++ GH+ V++V + G + S D++++LW + T +
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
K+ + A + +I S S D WDK+SG
Sbjct: 307 HKDF-------------------------VLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 124 FECNATLEGHENEVKSV------TWSKNGQFLATCSRDKSVWVWEV 163
L+GH N V SV + AT S D +W+
Sbjct: 342 --PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 44.8 bits (104), Expect = 1e-05
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 194 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
+D L+ + HTS V + F G LAT + T ++++
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYR 89
Query: 254 --EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
+ + N + S I + + +AT
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 140
Score = 38.6 bits (88), Expect = 0.001
Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 31/118 (26%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
T GH+ V +V+ I S +D+ + W P L G
Sbjct: 298 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--------- 348
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
N + A+ + ++ P N A+ S D +W
Sbjct: 349 --------------HRNSVISVAVANG--------SSLGPEYNVFATGSGDCKARIWK 384
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 87.2 bits (214), Expect = 2e-19
Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 5/250 (2%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
I AW+ IA + +++K ++ L+ H +V V W+ +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 208
+ TC D++ +VW + + ++ VI + + VR+ P + A S + +
Sbjct: 66 IVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT--- 265
++ W+ K STV SL + LA S D +I+ Y
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 266 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 325
+ + S G ++ + + +A D + + + + + + S
Sbjct: 185 GSKMPFGELMFESSSSCGW-VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 326 LVHTEHRAHN 335
L
Sbjct: 244 LPLLAVTFIT 253
Score = 66.8 bits (161), Expect = 1e-12
Identities = 60/333 (18%), Positives = 104/333 (31%), Gaps = 48/333 (14%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
LK H G+V V W P I +CG D+N +W + R L L + + R +
Sbjct: 45 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 104
Query: 65 KNIRLWGKESFG-----------NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
N + + S N + + + T+ W P +A+ S D
Sbjct: 105 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164
Query: 114 TAVWDKRSGQFE----------------CNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157
++ + E V V +S NG +A S D +
Sbjct: 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 224
Query: 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 217
V + + D+ A + + + V F +++A+ D LF D A
Sbjct: 225 VCLADA---DKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKL-- 278
Query: 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277
+ + + +R + D G AG+ + +SV +
Sbjct: 279 --SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG--AGLDSLHKNSVS-QISV 333
Query: 278 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310
LSG + T D + I+
Sbjct: 334 LSGGKAK----------CSQFCTTGMDGGMSIW 356
Score = 66.0 bits (159), Expect = 2e-12
Identities = 54/361 (14%), Positives = 104/361 (28%), Gaps = 64/361 (17%)
Query: 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKE 73
+ +WN T I+ C + + ++ E
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIY----------------------------------E 35
Query: 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 133
GNK+ L H + W+P N I + D VW + ++ +
Sbjct: 36 KSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94
Query: 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEV-GEEDEYECAAVINAHIQDVKKVRFHPFDN 192
+ V W+ N + A S + + + E D + C + V + +HP
Sbjct: 95 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 154
Query: 193 ILASASYDDTVKLFKEDKAEADWINFA--------------TLKSHTSTVWSLAFDRIGS 238
+LA+ S D ++F E + S V + F GS
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 214
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT----LSGHHGRTIYDISWCHL 294
R+A S D+TV + K A + + + T ++ H ++
Sbjct: 215 RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSA 274
Query: 295 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT----------EHRAHNQDVNCVAWN 344
++ D + + + D + H V+ ++
Sbjct: 275 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVL 334
Query: 345 P 345
Sbjct: 335 S 335
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 75.6 bits (184), Expect = 1e-15
Identities = 63/348 (18%), Positives = 114/348 (32%), Gaps = 47/348 (13%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL--HGLPVETSLRQL 61
+ LKGH V G I S +D +++W V + L H V S +
Sbjct: 9 PKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV-WSSQMR 66
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ + + T + S S DAT VWD +
Sbjct: 67 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 126
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
GQ C L GH V +G+ + + + D V VW+ + C + H
Sbjct: 127 GQ--CLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDP---ETETCLHTLQGHTNR 179
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241
V ++F + S S D +++++ + TL H S + + L
Sbjct: 180 VYSLQFDG--IHVVSGSLDTSIRVWDVE----TGNCIHTLTGHQSLTSGMELK--DNILV 231
Query: 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301
+ + D+TVKIW + +C+ TL G + + + T+
Sbjct: 232 SGNADSTVKIW---------------DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 276
Query: 302 CGDDAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNP 345
D ++++ D+ + + + E V + +
Sbjct: 277 SDDGTVKLW---------DLKTGEFIRNLVTLESGGSGGVVWRIRASN 315
Score = 69.5 bits (168), Expect = 1e-13
Identities = 54/306 (17%), Positives = 88/306 (28%), Gaps = 24/306 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+TL GH G VW+ + S + H V + +
Sbjct: 51 RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHEKR 109
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
L G + S ++D VWD
Sbjct: 110 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE--TE 167
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
C TL+GH N + + +G + + S D S+ VW+V + C + H
Sbjct: 168 TCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSG 222
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
+ NIL S + D TVK++ + + + T S
Sbjct: 223 MELKD--NILVSGNADSTVKIWDIKT---GQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 277
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVK+W + + V SG G ++ I + + A +
Sbjct: 278 DDGTVKLWD-----------LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326
Query: 305 DAIRIF 310
Sbjct: 327 GTEETK 332
Score = 64.8 bits (156), Expect = 5e-12
Identities = 46/256 (17%), Positives = 85/256 (33%), Gaps = 26/256 (10%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETS--------LRQL 61
+ + + S D +R+W + + L G +
Sbjct: 94 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 153
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
D +++W E+ T + GH T R + G + S S D + VWD
Sbjct: 154 AYDFMVKVWDPETETCLHTLQ-----GH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVE- 205
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
C TL GH++ + L + + D +V +W++ + N H
Sbjct: 206 -TGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 182 VKKVRFHPFDNILASASYDDTVKLFK-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
V ++F+ N + ++S D TVKL+ + + VW +
Sbjct: 263 VTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 320
Query: 241 ATCSDDAT----VKIW 252
A S + T + +
Sbjct: 321 AVGSRNGTEETKLLVL 336
Score = 60.6 bits (145), Expect = 1e-10
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL--- 61
TL+GH RV+++ ++ G + S D +IR+W + L G TS +L
Sbjct: 171 HTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN 228
Query: 62 -----VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
D +++W ++ T + ++ T NF+ ++S D T +
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQ----GPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 117 WDKRSGQFECN---ATLEGHENEVKSVTWSKNGQFLATCSRDKS----VWVW 161
WD ++G+F N G V + S A SR+ + + V
Sbjct: 285 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 42.5 bits (98), Expect = 6e-05
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 17/129 (13%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
TL GHQ + ++ S D +++W + + + L G S +
Sbjct: 211 HTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 268
Query: 63 ---------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
+D ++LW ++ + S G + S A S + T
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Query: 114 TA----VWD 118
V D
Sbjct: 329 EETKLLVLD 337
Score = 30.6 bits (67), Expect = 0.40
Identities = 5/40 (12%), Positives = 14/40 (35%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMV 41
+ + G G VW + + + + + ++V
Sbjct: 296 LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 335
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 72.2 bits (175), Expect = 1e-14
Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 18/255 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+ L GH G V + ++ + + S + H V
Sbjct: 49 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMM 108
Query: 65 KNIRLWGKESF--GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ T + +I SAS D T VW+ +
Sbjct: 109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC 168
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+F TL GH+ + + + + S D ++ +W D A + +
Sbjct: 169 EFVR--TLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLW-----DIECGACLRVLEGHEE 219
Query: 183 KKVRFHPFDNILASASYDDTVKLF-----KEDKAEADWINFATLKSHTSTVWSLAFDRIG 237
+ + S +YD +K++ + +A A + TL H+ V+ L FD
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--E 277
Query: 238 SRLATCSDDATVKIW 252
++ + S D T+ IW
Sbjct: 278 FQIVSSSHDDTILIW 292
Score = 61.4 bits (147), Expect = 4e-11
Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 22/305 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
V+ + ++ I S D I++W E L G Q E
Sbjct: 9 HCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
I + + + N + + +
Sbjct: 67 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT 126
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+ + + +++ + S D+++ VW E +N H + +
Sbjct: 127 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT---STCEFVRTLNGHKRGIAC 183
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
+++ ++ S S D+T++L+ + + + + R+ + +
Sbjct: 184 LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF------DNKRIVSGA 235
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
D +K+W + P + C+ TL H GR ++ + + I ++ D
Sbjct: 236 YDGKIKVW------DLVAALDPRAPAGTLCLRTLVEHSGR-VFRLQFDE--FQIVSSSHD 286
Query: 305 DAIRI 309
D I I
Sbjct: 287 DTILI 291
Score = 57.6 bits (137), Expect = 9e-10
Identities = 40/272 (14%), Positives = 67/272 (24%), Gaps = 35/272 (12%)
Query: 96 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155
I S D T +WDK + + C L GH V + + + +
Sbjct: 19 YCLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQYDERVIITGSSDST 76
Query: 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215
VW GE + A +D D
Sbjct: 77 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP--------TDI 128
Query: 216 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP---GNSAGIPTPDNDSVW 272
L H + V + FD + + S D T+K+W G +
Sbjct: 129 TLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186
Query: 273 KCVCTLSGHHGRTIY-------------------DISWCHLTDLIATACGDDAIRIFKEN 313
+ +SG TI I + D I+++
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 246
Query: 314 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ T H+ V + ++
Sbjct: 247 AALDPRAPAGTLCLRT-LVEHSGRVFRLQFDE 277
Score = 53.7 bits (127), Expect = 1e-08
Identities = 31/168 (18%), Positives = 50/168 (29%), Gaps = 24/168 (14%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQL 61
R + I S D+ I++W E L+G + +
Sbjct: 135 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSG 194
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
D IRLW E A L I S ++D VWD +
Sbjct: 195 SSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 122 GQ-------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162
C TL H V + + + + + S D ++ +W+
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 40.2 bits (92), Expect = 3e-04
Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 16/126 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
+TL GH+ + + + + ++ S D IRLW + L G +
Sbjct: 172 RTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 229
Query: 63 ------EDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAWSPCGNFIASASFDA 112
D I++W + + L H + I S+S D
Sbjct: 230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV--FRLQFDEFQIVSSSHDD 287
Query: 113 TTAVWD 118
T +WD
Sbjct: 288 TILIWD 293
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 73.0 bits (177), Expect = 1e-14
Identities = 41/370 (11%), Positives = 102/370 (27%), Gaps = 69/370 (18%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
K H +++VS + SC D +++W + + P + S V
Sbjct: 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHK 60
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ 123
+ H ++ +A+ SF +
Sbjct: 61 SGLH--------------------HVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED 100
Query: 124 FE--------CNATLEGHENEVKSVTWSKNG-----QFLATCSRDKSVWVWEV------- 163
+ ++ ++ W + L + ++W+
Sbjct: 101 ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160
Query: 164 --------GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215
+ Q V ++A+ + TV++ + +
Sbjct: 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLY 219
Query: 216 INF--ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 273
++ ++++++ S+ F GS LA D + Y+ I + +
Sbjct: 220 NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS 279
Query: 274 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 333
H + +S+ + + +A D +R + D+ + + + T
Sbjct: 280 QASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW---------DVKTKERITT-LNM 329
Query: 334 HNQDVNCVAW 343
H D+
Sbjct: 330 HCDDIEIEED 339
Score = 59.1 bits (141), Expect = 4e-10
Identities = 37/312 (11%), Positives = 100/312 (32%), Gaps = 40/312 (12%)
Query: 18 SWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGN 77
+ ++++ ++ + + + +K+ + L ++ + + +
Sbjct: 74 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASND 132
Query: 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV 137
+ + +++ + T + P + S + + + + + + + +
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE-----SPMTPSQFA 187
Query: 138 KSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR---FHPFDNIL 194
SV S+ G +AT + +V + E+ ++ I + +R F P ++L
Sbjct: 188 TSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 195 ASASYDDTVKLFK------------EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
A A ++ +H+S V SL+F+ G L +
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIA 299
D ++ W + + + TL+ H ++ D +A
Sbjct: 307 AGWDGKLRFW---------------DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 351
Query: 300 TACGDDAIRIFK 311
D + K
Sbjct: 352 EPGVFDVKFLKK 363
Score = 58.7 bits (140), Expect = 5e-10
Identities = 33/319 (10%), Positives = 70/319 (21%), Gaps = 40/319 (12%)
Query: 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA----TLEGHE 134
F A A H I + +F S S D VWD + E + H+
Sbjct: 3 FIATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60
Query: 135 NEVKSVTW-------SKNGQFLATCSRDKSVWVWEVGEED-------EYECAAVINAHIQ 180
+ + V + +AT S + + + ED E +
Sbjct: 61 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH 120
Query: 181 DVKKVRFHPFDN-----ILASASYDDTVKL--------------FKEDKAEADWINFATL 221
+++ ++ L + T + +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 222 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281
+ + S+ G +AT ++ TV+I + + +
Sbjct: 181 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239
Query: 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 341
+ + + +
Sbjct: 240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 299
Query: 342 AWNPVVPEPQKTNLTLHDV 360
+ + L DV
Sbjct: 300 SGETLCSAGWDGKLRFWDV 318
Score = 35.6 bits (80), Expect = 0.012
Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 12/117 (10%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL--HGLPVETSLRQL 61
S H V ++S+N G + S G D +R W + +E L H +E L
Sbjct: 282 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDIL 341
Query: 62 VEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIRETAWSPCGNFIASASFDATTAVW 117
D++ G+ + ++ R + + D + +
Sbjct: 342 AVDEH---------GDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 71.8 bits (174), Expect = 3e-14
Identities = 12/174 (6%), Positives = 32/174 (18%), Gaps = 17/174 (9%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-----ATLEGHENEVKSVTW 142
A+ + S+ + D+ F +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 143 SKNGQFLATCSRDKSV----WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198
D + + +Y + + I F A
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 199 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252
+ + + + + + L + DD + +
Sbjct: 296 EKGVLLKYDVKTRK--------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Score = 62.6 bits (150), Expect = 3e-11
Identities = 25/322 (7%), Positives = 60/322 (18%), Gaps = 40/322 (12%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVM------VIREPYEKLHGLPVETSLRQLV 62
R+ V + G + L + + + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ + + ++ + I + S FIA
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 123 Q-------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA--- 172
+ + + + + L S + +
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219
Query: 173 -AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW---INFATLKSHTSTV 228
VI + P + YD + D L+S
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288
+ + + + D + V + + + D
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKY----------------DVKTRKVTEVKNN----LTD 319
Query: 289 ISWCHLTDLIATACGDDAIRIF 310
+ + D I F
Sbjct: 320 LRLSADRKTVMVRKDDGKIYTF 341
Score = 58.7 bits (140), Expect = 4e-10
Identities = 11/179 (6%), Positives = 40/179 (22%), Gaps = 25/179 (13%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLR--------- 59
+ +++ + V+ ++ P L
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 60 ----QLVEDKNIRLWGKESFGNKFTA------KAILSDGHQRTIRETAWSPCGNFIASAS 109
E L + I + + A
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 110 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168
+D ++ + + +N + + S + + + D ++ + + + ++
Sbjct: 296 EKGVLLKYDVKTRK------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
Score = 41.0 bits (94), Expect = 2e-04
Identities = 17/257 (6%), Positives = 51/257 (19%), Gaps = 34/257 (13%)
Query: 96 TAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154
+SP G+ IA S + D ++ V + +
Sbjct: 8 EDFSPLDGDLIAFVSRG-QAFIQDVSGTY----VLKVPEPLRIRYVRRGGDTKVAFIHGT 62
Query: 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 214
+ ++ + + +K + + + + D+ E
Sbjct: 63 REGDFLG------------IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 110
Query: 215 WINFAT------LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268
++ T +S + + +A + +
Sbjct: 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV-------MQAIHV 163
Query: 269 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 328
+ + Y ++ + + + +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP--DRVVLNFSFEVVSKPF 221
Query: 329 TEHRAHNQDVNCVAWNP 345
N P
Sbjct: 222 V-IPLIPGSPNPTKLVP 237
Score = 37.9 bits (86), Expect = 0.002
Identities = 2/37 (5%), Positives = 14/37 (37%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+ ++ + + + ++ + + +D I +
Sbjct: 305 VKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 69.8 bits (169), Expect = 1e-13
Identities = 32/256 (12%), Positives = 76/256 (29%), Gaps = 13/256 (5%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
++ + + P G + GE + +W + P K + L
Sbjct: 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ ++ + + R + I++ T D
Sbjct: 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207
Query: 122 GQFECNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 177
++ + +++ S+ + G++LA +V V V + D+Y+ +
Sbjct: 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL----HL 263
Query: 178 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237
H V ++F S D+ + ++ +S+V S
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA-----SIFQSKESSSVLSCDISVDD 318
Query: 238 SRLATCSDDATVKIWK 253
+ T S D +++
Sbjct: 319 KYIVTGSGDKKATVYE 334
Score = 64.4 bits (155), Expect = 6e-12
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
H+ + ++ CG + S D W G + V S S + ++
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKY 320
Query: 149 LATCSRDKSVWVWEV 163
+ T S DK V+EV
Sbjct: 321 IVTGSGDKKATVYEV 335
Score = 62.5 bits (150), Expect = 3e-11
Identities = 27/293 (9%), Positives = 64/293 (21%), Gaps = 44/293 (15%)
Query: 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE---CNATLEGHENE 136
A+ I + H + S + + VWD + +N
Sbjct: 41 HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY 99
Query: 137 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 196
++S +G L ++ +W++ A + ++
Sbjct: 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVC--- 156
Query: 197 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256
+ + + HT + G++L T D TV+ W +
Sbjct: 157 --FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214
Query: 257 PGNSAGIPTPDN------------------------DSVWKCVCTLSGHHGRTIYDISWC 292
V K H + + +
Sbjct: 215 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA 274
Query: 293 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ + D+ + + + + V +
Sbjct: 275 YCGKWFVSTGKDNLLNAW---------RTPYGASIFQSK--ESSSVLSCDISV 316
Score = 60.2 bits (144), Expect = 1e-10
Identities = 30/309 (9%), Positives = 69/309 (22%), Gaps = 29/309 (9%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVE------TSLRQLV 62
H V V+ + + + G +++W + + L S + L
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ + + G+ S + + A + + +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
N TL + T + + + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + P ++ + + + L H S V SL F G +
Sbjct: 228 FSLGYCPTGEW-----LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
D + W + ++ I T
Sbjct: 283 TGKDNLLNAW---------------RTPYGASIFQS--KESSSVLSCDISVDDKYIVTGS 325
Query: 303 GDDAIRIFK 311
GD +++
Sbjct: 326 GDKKATVYE 334
Score = 45.2 bits (105), Expect = 9e-06
Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 6/95 (6%)
Query: 107 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166
DA R + TL H V +VT S + + T V VW++
Sbjct: 27 PFPPDALIGPGIPRHAR--QINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82
Query: 167 DEYECAAVIN--AHIQDVKKVRFHPFDNILASASY 199
+ ++ ++ + P L
Sbjct: 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 65.6 bits (158), Expect = 3e-12
Identities = 36/337 (10%), Positives = 81/337 (24%), Gaps = 43/337 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-----HGLPV----- 54
Q + + + ++ P +++ D ++ ++ I+ L + P+
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 55 ----ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 110
+ + I + ++ I +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV-GEEDEY 169
+ N + + K T N L + V + + ED+
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI-----------NF 218
Q A +S D V + D D+
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278
+ V S+ F L T D + W N K +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW---------------NLQTRKKIKNF 289
Query: 279 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315
+ + ++ I+ +++ A DD + +
Sbjct: 290 AKFNEDSVVKIACSD--NILCLATSDDTFKTNAAIDQ 324
Score = 59.9 bits (143), Expect = 2e-10
Identities = 24/263 (9%), Positives = 70/263 (26%), Gaps = 9/263 (3%)
Query: 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWS 143
+ + I + P + + S+D + V+ + +++ + +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 144 KN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202
N + + + ++ ++ A++ + ++ I AS
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262
V + + + D SRL +++ V+ ++ + G
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322
L + +A DD + +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYA---CSSIDGRVAVEFFDDQGDDYN----SSKRFAF 238
Query: 323 SFDLVHTEHRAHNQDVNCVAWNP 345
++ + VN + ++P
Sbjct: 239 RCHRLNLKDTNLAYPVNSIEFSP 261
Score = 47.2 bits (110), Expect = 3e-06
Identities = 14/158 (8%), Positives = 38/158 (24%), Gaps = 25/158 (15%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
+ + D + + +D+
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVE----------------------FFDDQGDDY 230
Query: 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT 129
+ F + + + +SP F+ +A D + W+ ++ +
Sbjct: 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK--KIKN 288
Query: 130 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167
NE V + + L + D + ++
Sbjct: 289 FAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325
Score = 37.9 bits (86), Expect = 0.002
Identities = 16/140 (11%), Positives = 34/140 (24%), Gaps = 44/140 (31%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+ V ++ ++P+ + + G D I W
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW---------------------- 278
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
N T K I + + N + A+ D T
Sbjct: 279 ----------------NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA- 321
Query: 121 SGQFECNATLEGHENEVKSV 140
+ T+E + + + +
Sbjct: 322 -----IDQTIELNASSIYII 336
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 58.8 bits (140), Expect = 4e-10
Identities = 40/346 (11%), Positives = 77/346 (22%), Gaps = 24/346 (6%)
Query: 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL--HGLPVE----TSLR 59
TL+GH V + + + +DK IR++ + ++ +L H V
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 119
LV R + +I + S D T VW
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179
+ E V SV I
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--------SGHGNIVVSG 177
Query: 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239
+ + + + + T+ +
Sbjct: 178 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237
Query: 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299
+ K SA +H + I+ +++D I
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNIL 297
Query: 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ ++ I+ ++ S LVH + V +
Sbjct: 298 VSGSENQFNIY---------NLRSGKLVHANILKDADQIWSVNFKG 334
Score = 55.7 bits (132), Expect = 5e-09
Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 12/223 (5%)
Query: 128 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 187
TL GH V + ++ T + DK + V++ + ++ H V +++
Sbjct: 6 TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKY 61
Query: 188 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247
IL S S D TV+++ K + + + + T S D
Sbjct: 62 AH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV--EYKNIKYIVTGSRDN 118
Query: 248 TVKIW-----KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
T+ +W + + + G + +++ +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
D+ + ++ + ++ C++ +
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
Score = 48.0 bits (112), Expect = 1e-06
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 5/159 (3%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
L GH R+++ ++ + S D IR+W + E L G L +L +
Sbjct: 195 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDK 254
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRT--IRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ S + T T + N + S S + +++ RSG
Sbjct: 255 FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 313
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161
+ +A + +++ SV + +A +D ++
Sbjct: 314 K-LVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLE 350
Score = 44.9 bits (104), Expect = 1e-05
Identities = 35/310 (11%), Positives = 79/310 (25%), Gaps = 68/310 (21%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
L GH G VW + + G ++S + + + L +
Sbjct: 47 LQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK 106
Query: 63 ---------EDKNIRLWGKES----------------FGNKFTAKAILSDGHQRTIRETA 97
D + +W F +
Sbjct: 107 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166
Query: 98 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157
S GN + S S+D T + Q +C L GH + + S + + + S D +
Sbjct: 167 VSGHGNIVVSGSYDNT--LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 224
Query: 158 VWV-----------------------------------WEVGEEDEYECAAVINAHIQDV 182
+ + + D + + + H ++
Sbjct: 225 IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + + + ++ ++ + A + +WS+ F + +A
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVH---ANILKDADQIWSVNFKG-KTLVAA 340
Query: 243 CSDDATVKIW 252
D +
Sbjct: 341 VEKDGQSFLE 350
Score = 42.2 bits (97), Expect = 1e-04
Identities = 20/191 (10%), Positives = 43/191 (22%), Gaps = 4/191 (2%)
Query: 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNK 78
+ G ++ S D + +W + + L G ++ + +
Sbjct: 167 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR 226
Query: 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 138
+ A H N
Sbjct: 227 IWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSA 286
Query: 139 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198
T+ + L + S + ++ + A I + V F ++A+
Sbjct: 287 ITTFYVSDNILVSGS-ENQFNIYNL--RSGKLVHANILKDADQIWSVNFKG-KTLVAAVE 342
Query: 199 YDDTVKLFKED 209
D L D
Sbjct: 343 KDGQSFLEILD 353
Score = 35.3 bits (79), Expect = 0.014
Identities = 5/35 (14%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV 39
+ ++W+V++ + T++++ +D L +
Sbjct: 318 ANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEI 351
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 55.4 bits (131), Expect = 4e-09
Identities = 33/287 (11%), Positives = 77/287 (26%), Gaps = 46/287 (16%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-------------------------- 38
+T+ GH + ++ NP + S D I W
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSS 62
Query: 39 ----VMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94
+ K + L + + + +
Sbjct: 63 ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSP 122
Query: 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154
+A S N++A + T K S + ++ S + ++A
Sbjct: 123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV 182
Query: 155 DKSVWVWEVGEEDEYECAAVINAHIQD--------VKKVRFHPFDNILASASYDDTVKLF 206
+ ++++ + + ++++A+ S D + ++
Sbjct: 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242
Query: 207 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
+ L +H V +L ++ S L + DA +K W
Sbjct: 243 SVKRPMK---IIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
Score = 49.2 bits (115), Expect = 4e-07
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
+ +A+ S D ++ + + L H++ V ++ W
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST- 271
Query: 149 LATCSRDKSVWVWEV 163
L + D + W V
Sbjct: 272 LVSSGADACIKRWNV 286
Score = 46.5 bits (108), Expect = 3e-06
Identities = 33/278 (11%), Positives = 64/278 (23%), Gaps = 40/278 (14%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147
GH + I +P + S S+D W S + H N + S+ SK +
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEWSSSSM-------HQDHSNLIVSLDNSKAQE 59
Query: 148 FLATCSRDKSVWVWEVGEEDEYECAAVI----------------NAHIQDVKKVRFHPFD 191
+ + D E + +
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 192 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 251
N SA + + F S S ++ + +
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 252 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL----IATACGDDAI 307
+ + + + T + + ++ +AT D I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
I+ + + AH VN + W
Sbjct: 240 FIY---------SVKRPMKIIKALNAHKDGVNNLLWET 268
Score = 38.8 bits (88), Expect = 8e-04
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 12/68 (17%)
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
G E T+ GH + ++T + L + S D + W + H
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ--------DHSNL 48
Query: 182 VKKVRFHP 189
+ +
Sbjct: 49 IVSLDNSK 56
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 55.0 bits (130), Expect = 5e-09
Identities = 32/292 (10%), Positives = 71/292 (24%), Gaps = 46/292 (15%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP---YEKLHGLPV------- 54
Q GH + +S + G + S + +I W + + +H +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 55 ---------------------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93
+ V +K + H
Sbjct: 66 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125
Query: 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC- 152
+ S+ + G + + S + T
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185
Query: 153 ------------SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 200
+ + V + V E H V V + P + LA+ S D
Sbjct: 186 AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 245
Query: 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252
++V ++ + + +H + + + + + D+ +K W
Sbjct: 246 NSVIVW--NMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 50.8 bits (119), Expect = 2e-07
Identities = 13/169 (7%), Positives = 37/169 (21%), Gaps = 4/169 (2%)
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+ GH + +++ S +G+ L + + + W++ + H +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI--STGISNRVFPDVHATMITG 60
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
++ ++ + D + +S LA G
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV--ANKLSSQPLGLAVSADGDIAVAAC 118
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293
+ G ++
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG 167
Score = 48.4 bits (113), Expect = 7e-07
Identities = 14/75 (18%), Positives = 26/75 (34%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
H + +WSP +A+ S D + VW+ H + N
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282
Query: 149 LATCSRDKSVWVWEV 163
+ + +D ++ W V
Sbjct: 283 IVSAGQDSNIKFWNV 297
Score = 32.3 bits (71), Expect = 0.11
Identities = 8/73 (10%), Positives = 18/73 (24%), Gaps = 10/73 (13%)
Query: 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 332
GH+ I +S + +A + I + D+ +
Sbjct: 3 SIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSW---------DISTGISNRVFPD 52
Query: 333 AHNQDVNCVAWNP 345
H + +
Sbjct: 53 VHATMITGIKTTS 65
Score = 31.9 bits (70), Expect = 0.16
Identities = 12/109 (11%), Positives = 24/109 (22%), Gaps = 3/109 (2%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
V + + + P L D ++ +
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250
Query: 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
W + I+ H + + I SA D+ W+
Sbjct: 251 WNMNKPSDH---PIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 51.7 bits (122), Expect = 8e-08
Identities = 17/267 (6%), Positives = 56/267 (20%), Gaps = 22/267 (8%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRD 155
A ++ ++ V D S + + + + + + + +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 156 KSVWVWEVG---EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212
++ ++ ++V + + P + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 213 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 272
F+T + L +DD ++ Y G
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL-----YVAGPDIYKMDVKTG--- 173
Query: 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 332
K L + + L + + + + F +
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML---------YTIARFKDDKQDPA 224
Query: 333 AHNQDVNCVAWNPVVPEPQKTNLTLHD 359
+ ++ + +
Sbjct: 225 TADLLYGYLSVDLKTGKTHTQEFADLT 251
Score = 51.7 bits (122), Expect = 9e-08
Identities = 20/252 (7%), Positives = 54/252 (21%), Gaps = 11/252 (4%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
S +++ + +P G + + V++ P ++ +
Sbjct: 78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 137
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
+ R ++ + + D
Sbjct: 138 VRTFPMPR--QVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 195
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
+ + + Q AT ++ + +
Sbjct: 196 YFWPHQSPR-HEFSMLYTIARFKDDKQDPATADLLYGYLSVDL--KTGKTHTQEFADLTE 252
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
P D + K + + N T + +AFD+ G +L
Sbjct: 253 LYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN------LDHTYYCVAFDKKGDKL 306
Query: 241 ATCSDDATVKIW 252
+ ++
Sbjct: 307 YLGGTFNDLAVF 318
Score = 44.7 bits (104), Expect = 1e-05
Identities = 11/155 (7%), Positives = 36/155 (23%), Gaps = 5/155 (3%)
Query: 140 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 198
+++ + ++ V +V + Y+ + P + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNN 59
Query: 199 YDDTVKLF--KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256
+ + K + +++S A G + +
Sbjct: 60 HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119
Query: 257 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291
+ + + K V T + +
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
Score = 33.9 bits (76), Expect = 0.038
Identities = 10/118 (8%), Positives = 29/118 (24%), Gaps = 4/118 (3%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
+ ++ + + + + E L K+
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266
Query: 70 ----WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
+ + + K I + T A+ G+ + AV++ + +
Sbjct: 267 IYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 51.4 bits (121), Expect = 8e-08
Identities = 37/313 (11%), Positives = 77/313 (24%), Gaps = 53/313 (16%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
++ H + +P G +S N+R+W K
Sbjct: 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT------------- 97
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
+++ +W IA+
Sbjct: 98 ----------------------IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 135
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 183
N L G + SV + + F D + G +++ +
Sbjct: 136 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSV 195
Query: 184 KVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + + + +H+ +V+ L + G+++A+
Sbjct: 196 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 255
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
S D T+KIW N + K T+ + + +
Sbjct: 256 ASADKTIKIW---------------NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 303 GDDAIRIFKENPE 315
+ I NPE
Sbjct: 301 ANGFINFV--NPE 311
Score = 45.7 bits (106), Expect = 6e-06
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156
+P G+ I + + S H ++ S +G + A+
Sbjct: 24 GNTPAGDKIQYCN-GTSVYTVPVGSL--TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80
Query: 157 SVWVWEVGEEDEYEC 171
+V +W+ +
Sbjct: 81 NVRIWDTTQTTHILK 95
Score = 39.9 bits (91), Expect = 5e-04
Identities = 11/112 (9%), Positives = 23/112 (20%), Gaps = 5/112 (4%)
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241
+ P + + + +V + H+ G A
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT----DTEIYTEHSHQTTVAKTSPSGYYCA 74
Query: 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293
+ V+IW + + P K + S
Sbjct: 75 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
Score = 32.2 bits (71), Expect = 0.13
Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 36/118 (30%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+S H G V+ ++W+P GT I+S DK I++W + + + +
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV--------- 278
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
G + ++ + S S + +
Sbjct: 279 ---------------------------GTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 49.1 bits (115), Expect = 6e-07
Identities = 37/324 (11%), Positives = 82/324 (25%), Gaps = 37/324 (11%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-----HGLPVETSLR----- 59
+ ++S++P I+ + + HG V T+++
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 60 --QLV----EDKNIRLWGKESFGNKFTAKAILS---DGHQRTIRETAWSPCGNFIASASF 110
Q + E + +WG + + + I + +W G +
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEY 169
+ GH + + ++ T D SV ++
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229
+ V+ V F P D + K+ +
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255
Query: 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYD 288
+ AT DAT+++W + + KCV +
Sbjct: 256 FALSWLDSQKFATVGADATIRVW---------------DVTTSKCVQKWTLDKQQLGNQQ 300
Query: 289 ISWCHLTD-LIATACGDDAIRIFK 311
+ + I + D + ++
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFYE 324
Score = 48.4 bits (113), Expect = 1e-06
Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 14/124 (11%)
Query: 223 SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281
+ + L++D + +A A V+ D DS V +GH
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-------------DGDSKVPPVVQFTGH 61
Query: 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 341
+ + + + GD++ ++ V +E + ++ +
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 342 AWNP 345
+W+
Sbjct: 122 SWDF 125
Score = 46.1 bits (107), Expect = 5e-06
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ- 147
+ A+ DAT VWD + + TL+ + + V G
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 309
Query: 148 FLATCSRDKSVWVWEV 163
+ + S D ++ +E+
Sbjct: 310 RIISLSLDGTLNFYEL 325
Score = 41.1 bits (94), Expect = 2e-04
Identities = 22/213 (10%), Positives = 56/213 (26%), Gaps = 13/213 (6%)
Query: 8 KGHQGRVWNVSWNPQGT--MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDK 65
+ G + ++SW+ +G + G D ++ G + L + +
Sbjct: 112 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 171
Query: 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 125
+R G+ + + + + +
Sbjct: 172 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 231
Query: 126 C-----------NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV 174
C + + Q AT D ++ VW+V + +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL 291
Query: 175 INAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + + + + S S D T+ ++
Sbjct: 292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 46.5 bits (109), Expect = 4e-06
Identities = 24/244 (9%), Positives = 56/244 (22%), Gaps = 27/244 (11%)
Query: 116 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC----------SRDKSVWVWEVGE 165
V+D + + ++G + + + +R V + +
Sbjct: 2 VYDADAK--KLLGQIDGGF--GPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDN-- 55
Query: 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--- 222
+ A I K + P A ++ + + A + +
Sbjct: 56 -TTLDHAGEIVIP---AKHAQHVPSPYNTAFSADGKRLYVANITPAASVT-VIDAVSKKM 110
Query: 223 -SHTSTVWSLAFDRIGSRL--ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279
S T + G A C + + + + + V K ++
Sbjct: 111 LSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVN 170
Query: 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 339
+ Y + A GD + + + A N
Sbjct: 171 ASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQN 230
Query: 340 CVAW 343
Sbjct: 231 RYYV 234
Score = 32.7 bits (73), Expect = 0.095
Identities = 17/204 (8%), Positives = 35/204 (17%), Gaps = 44/204 (21%)
Query: 17 VSWNPQGTMISSCGEDKNIRLWV----MVIREPYEKLHGLPVETSL--------RQLV-- 62
+ C K + + + + + +
Sbjct: 122 AYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFT 181
Query: 63 -EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
N+R F R W P G +
Sbjct: 182 TYGGNVRSADFSGDKPAFGKPW---SLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHK 238
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
G T H++ Q + K ++
Sbjct: 239 G------TDGSHKD--------PGTQVWVYDLKSKQRVARWDLA----------QQKVEP 274
Query: 182 VKKVRFHPFDN--ILASASYDDTV 203
+ ++ D + D V
Sbjct: 275 LVSIQVSEDDKPLFYGLTATSDLV 298
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 44.0 bits (103), Expect = 3e-05
Identities = 21/200 (10%), Positives = 48/200 (24%), Gaps = 31/200 (15%)
Query: 104 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163
F + A+ D + E L+ V S +G++L RD V + ++
Sbjct: 34 FSVTLRDAGQIALIDGSTY--EIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDL 90
Query: 164 --GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---------TVKLFKEDKAE 212
E + + D + +Y T++ K
Sbjct: 91 WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 150
Query: 213 ADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 271
+ V ++ + + + + +
Sbjct: 151 GMTYDEQEY-HPEPRVAAILASHYRPEFIVNVKETGKILLV---------------DYTD 194
Query: 272 WKCVCTLSGHHGRTIYDISW 291
+ T R ++D
Sbjct: 195 LNNLKTTEISAERFLHDGGL 214
Score = 40.9 bits (95), Expect = 3e-04
Identities = 22/175 (12%), Positives = 48/175 (27%), Gaps = 16/175 (9%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFL-ATC 152
S G ++ D + D + A + + S ++ A
Sbjct: 68 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 127
Query: 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLF--KED 209
+ + + E + + + +HP + A AS+ + KE
Sbjct: 128 YWPPQYVIMDG---ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 184
Query: 210 K--AEADWINFATLKSHTSTV----WSLAFDRIGSRLATCSDDATVKIWKEYKPG 258
D+ + LK+ + D T ++ + + K G
Sbjct: 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 239
Score = 34.4 bits (78), Expect = 0.025
Identities = 27/293 (9%), Positives = 61/293 (20%), Gaps = 49/293 (16%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
L V + G + G D + + +
Sbjct: 56 TVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDL------------------------ 90
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQ 123
A+ + + IA A + + D
Sbjct: 91 --------WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE--T 140
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
E + + A S + ++ V E + +++ +
Sbjct: 141 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI---LLVDYTDLNN 197
Query: 183 KKVRFHPFDNILASASYDDTVKLF--------KEDKAEADWINFATLKSHTSTVWSLAFD 234
K + L D + + F K + ++
Sbjct: 198 LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG 257
Query: 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287
AT + + P D+ WK + + G +++
Sbjct: 258 ANFVHPTFGPVWATSHMGDDSVALIGT-DPEGHPDNAWKILDSFPALGGGSLF 309
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 42.9 bits (99), Expect = 6e-05
Identities = 13/138 (9%), Positives = 30/138 (21%), Gaps = 5/138 (3%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
+ + + E + + V R
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 70 WGKESFGNKF---TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 126
+G + F +I + S G+ + A +D + E
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL--EK 313
Query: 127 NATLEGHENEVKSVTWSK 144
++ N S+ +
Sbjct: 314 KGQVDLPGNASMSLASVR 331
Score = 41.7 bits (96), Expect = 1e-04
Identities = 19/284 (6%), Positives = 60/284 (21%), Gaps = 32/284 (11%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLW---------------VMVIRE 44
+ T+ P G ++ + +++ +
Sbjct: 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82
Query: 45 PYEKLHGLPVETSLRQLVEDKNIRLW------GKESFGNKFTAKAILSDGHQRTIRETAW 98
P +L + L + + + T + R I AW
Sbjct: 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAW 142
Query: 99 SPCGNFIASASFDATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156
+ G+ + D + + + + + + +
Sbjct: 143 ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202
Query: 157 SVWVWEVG---EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213
++ ++ ++ D S + +
Sbjct: 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVL 262
Query: 214 DWINFATLKS-----HTSTVWSLAFDRIGSRLATCSDDATVKIW 252
+ + S + +S+ GS + + +
Sbjct: 263 ESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 33.6 bits (75), Expect = 0.047
Identities = 19/212 (8%), Positives = 50/212 (23%), Gaps = 4/212 (1%)
Query: 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKL 205
++ +R + V + E+ + I P A+ + +++
Sbjct: 2 DYILAPARPDKLVVIDT-EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 206 FK-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 264
I+ +T + +++ A G LA +++ +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 265 TPDNDSVWKCVCTLSGHHGRTI-YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323
+ S K D S + +A + ++ P
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 324 FDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNL 355
++ +A
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 41.7 bits (96), Expect = 1e-04
Identities = 18/172 (10%), Positives = 37/172 (21%), Gaps = 32/172 (18%)
Query: 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 142
+ + I A+S + ++ D SG + +E ++ W
Sbjct: 187 EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 246
Query: 143 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202
G R + +
Sbjct: 247 RPGGWQQVAYHRALDRIYL-------------------------LVDQRDEWRHKTASRF 281
Query: 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL--ATCSDDATVKIW 252
V + A + + S+ + L A + D T+ I
Sbjct: 282 VVVLDA----KTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIH 328
Score = 38.2 bits (87), Expect = 0.002
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 146
H+ R + + V D ++G E A E +E+ S+ S++
Sbjct: 255 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAKFE-MGHEIDSINVSQDE 311
Query: 147 Q--FLATCSRDKSVWVWEV 163
+ A + DK++++ +
Sbjct: 312 KPLLYALSTGDKTLYIHDA 330
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 38.8 bits (89), Expect = 0.001
Identities = 24/217 (11%), Positives = 57/217 (26%), Gaps = 12/217 (5%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKNGQFLATCS 153
S G ++ DA + D + + A ++ + S ++ +
Sbjct: 68 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213
+ GE E + D + P + ++ + ++ +
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 187
Query: 214 DWINFA-------TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 266
+N+ T + +D T ++++ + K
Sbjct: 188 LLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALV 245
Query: 267 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303
D + H + S HL D + G
Sbjct: 246 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG 282
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 37.7 bits (86), Expect = 0.003
Identities = 31/261 (11%), Positives = 53/261 (20%), Gaps = 21/261 (8%)
Query: 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 142
A SDG A S + A F TT W +G G +
Sbjct: 15 AAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL--AVA 72
Query: 143 SKNGQFLA----------TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK----VRFH 188
+G A R V V++ + +A V +
Sbjct: 73 GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132
Query: 189 PFDNILASASYDD-TVKLFK-EDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLATCS 244
L + ++ A+ + S A+
Sbjct: 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
A A + + I + A
Sbjct: 193 AAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASS-ILQGDIPAAGATMKAAIDG 251
Query: 305 DAIRIFKENPEAGDSDMVSFD 325
+ +N + MV+
Sbjct: 252 NESGRKADNFRSAGFQMVAKL 272
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 33.7 bits (75), Expect = 0.045
Identities = 18/240 (7%), Positives = 52/240 (21%), Gaps = 8/240 (3%)
Query: 107 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGE 165
++ VW+ + +V+ + S + ++L R + V + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225
+D A +A + + + SY+ + + +
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT-RLEDGLPVGVVDVVEGL 127
Query: 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285
S + + + V T+ G R
Sbjct: 128 DGCHSANISPDNRT--LWVPALKQDRICLFTVSDDGHLVA----QDPAEVTTVEGAGPRH 181
Query: 286 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ + + K+ + + + +
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 33.2 bits (74), Expect = 0.080
Identities = 30/329 (9%), Positives = 84/329 (25%), Gaps = 24/329 (7%)
Query: 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---FECNATLEG 132
+T L + ++ + W ++ + V++ G F N+T +
Sbjct: 2 RKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDE 59
Query: 133 HENEVKSVTWSKNGQFLATCSRDKSVW------------------VWEVGEEDEYECAAV 174
+ + + S +GQF+ W + E + +
Sbjct: 60 FGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTW 119
Query: 175 INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234
+ + I + KED ++ + S +L +
Sbjct: 120 SPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS 179
Query: 235 RIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293
G+ LA +D V + + + + + ++ + +
Sbjct: 180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239
Query: 294 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353
+ + + D + + + + Q+ + + +
Sbjct: 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW 299
Query: 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLL 382
N + + + P + L
Sbjct: 300 NCLVARQHIEMSTTGWVGRFRPSEPHFTL 328
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 32.5 bits (72), Expect = 0.081
Identities = 23/255 (9%), Positives = 52/255 (20%), Gaps = 16/255 (6%)
Query: 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
T+ +P GT + + ++ + +
Sbjct: 26 ATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--------AGSSP 76
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
+ A + LS + G + +
Sbjct: 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG 136
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 183
+ + + V + + D + + + + D
Sbjct: 137 DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV 196
Query: 184 KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-----SHTSTVWSLAFDRIGS 238
KV P + V + I+ T K +A G
Sbjct: 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGK 256
Query: 239 RL-ATCSDDATVKIW 252
++ S TV +
Sbjct: 257 KVYVALSFCNTVSVI 271
>d1vjfa_ d.116.1.1 (A:) Hypothetical protein CC0111 {Caulobacter
crescentus [TaxId: 155892]}
Length = 168
Score = 32.0 bits (72), Expect = 0.086
Identities = 22/174 (12%), Positives = 44/174 (25%), Gaps = 14/174 (8%)
Query: 52 LPVETSLRQLVEDKNIRLWGKE---SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 108
+ L + + + F + + + T G +
Sbjct: 1 MKTRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFLKDAKGQLWLIS 60
Query: 109 SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168
+ TT K G + + SV + + + E
Sbjct: 61 ALGETTIDLKKLHHVIGSGRLSFGPQEMMLETL----------GVTPGSVTAFGLINDTE 110
Query: 169 YECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATL 221
V++ + D V FHP N + S + E ++FA +
Sbjct: 111 KRVRFVLDKALADSDPVNFHPLKNDATTAVSQAGLRRFLAALGVEPMIVDFAAM 164
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 30.6 bits (67), Expect = 0.33
Identities = 11/73 (15%), Positives = 25/73 (34%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
+ + AWSP G+ +A +F++ + ++ + + +S +G
Sbjct: 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK 96
Query: 149 LATCSRDKSVWVW 161
LA
Sbjct: 97 LAFALSKTGSLNL 109
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 31.1 bits (69), Expect = 0.35
Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 11/113 (9%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA---------SFDAT 113
+ +RLW E+ N T SP + + S+
Sbjct: 35 QKGTVRLWNVET--NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92
Query: 114 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166
+ G + E +++ W GQ L + + VG++
Sbjct: 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQ 145
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA
{Borrelia burgdorferi [TaxId: 139]}
Length = 322
Score = 28.3 bits (63), Expect = 2.2
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ----DVKKVRFHPFDN-ILA 195
+ TC R+KSV +G+ + I +H + FD ++
Sbjct: 56 NLMPGDKIFYTC-REKSVAFAIIGKNPIEDGMNFIVSHTDSPRVPAGTAKDVGFDKALIG 114
Query: 196 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ DD + +F ++ + + T+ + + + IGS +T
Sbjct: 115 AYGQDDKICVFTSLESI---FDLEETPNKTAICFLVDKEEIGSTGST 158
>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl
phosphate synthase {Archaeon Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 231
Score = 27.8 bits (61), Expect = 2.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 390 KHIKNIMLTIDLTDEVLKEAVENGTDLII 418
+HI + TDE++K ++GTD ++
Sbjct: 7 RHITKLDPDRTNTDEIIKAVADSGTDAVM 35
>d1viza_ c.1.4.1 (A:) PcrB protein homolog YerE {Bacillus subtilis
[TaxId: 1423]}
Length = 229
Score = 27.8 bits (61), Expect = 2.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 387 NTTKHIKNIMLTIDLTDEVLKEAVENGTDLI 417
KH+ + DL DE L+ E+GTD +
Sbjct: 6 TEWKHVFKLDPNKDLPDEQLEILCESGTDAV 36
>d1y7qa1 a.28.3.2 (A:37-132) Zinc finger protein 174 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 26.3 bits (58), Expect = 3.3
Identities = 7/40 (17%), Positives = 12/40 (30%)
Query: 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 186
QFL + V E ++ + KK +
Sbjct: 57 QFLTILPEEIQARVRHRCLMSSKEIVTLVEDFHRASKKPK 96
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 27.3 bits (59), Expect = 4.0
Identities = 7/66 (10%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 96 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155
+ G + + + + + GQ + + V +G + S+D
Sbjct: 205 VGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGS-VVLASKD 263
Query: 156 KSVWVW 161
++++
Sbjct: 264 YRLYIY 269
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 127
Score = 26.6 bits (58), Expect = 4.1
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 266 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
P D + LS H + + L + I+T
Sbjct: 44 PACDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNG 80
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 27.2 bits (60), Expect = 5.5
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 8/70 (11%)
Query: 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVT 141
A + + W+ I + D + K Q GH + + +
Sbjct: 324 NAYTTLFIDSQV--CKWNIADA-IKHYNGDRVNYIRQKLDVQ-----YQPGHNHASLTES 375
Query: 142 WSKNGQFLAT 151
+G++L
Sbjct: 376 RDADGKWLVV 385
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase
{Enterobacter cloacae [TaxId: 550]}
Length = 363
Score = 26.4 bits (57), Expect = 9.0
Identities = 14/101 (13%), Positives = 32/101 (31%)
Query: 365 EAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPI 424
E + + D +G+ + P T +++ N +++E + G + +
Sbjct: 215 EVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL 274
Query: 425 FAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEGR 465
+ K R + Y+ D I +G
Sbjct: 275 AGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGL 315
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 25.1 bits (54), Expect = 9.3
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 398 TIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKW 436
T+ LTD ++A++ +++ + P + +
Sbjct: 2 TMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLE 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.422
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,896,277
Number of extensions: 88793
Number of successful extensions: 657
Number of sequences better than 10.0: 1
Number of HSP's gapped: 352
Number of HSP's successfully gapped: 128
Length of query: 479
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 390
Effective length of database: 1,185,626
Effective search space: 462394140
Effective search space used: 462394140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.9 bits)