Query psy14817
Match_columns 138
No_of_seqs 191 out of 1927
Neff 12.0
Searched_HMMs 29240
Date Fri Aug 16 21:35:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14817.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14817hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.9 2.5E-25 8.5E-30 139.0 16.0 109 1-136 21-129 (304)
2 3ow8_A WD repeat-containing pr 99.9 2.6E-25 8.8E-30 140.0 15.7 110 1-137 172-281 (321)
3 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.5E-24 5.1E-29 137.6 18.5 136 1-137 202-337 (345)
4 2ynn_A Coatomer subunit beta'; 99.9 4.3E-25 1.5E-29 137.9 15.5 112 1-137 63-174 (304)
5 3ow8_A WD repeat-containing pr 99.9 7.4E-25 2.5E-29 137.9 15.5 107 1-134 214-320 (321)
6 4gqb_B Methylosome protein 50; 99.9 2E-24 6.9E-29 137.1 16.8 114 1-137 90-203 (344)
7 1vyh_C Platelet-activating fac 99.9 7.5E-25 2.6E-29 141.8 15.0 110 1-137 116-225 (410)
8 4gqb_B Methylosome protein 50; 99.9 1.8E-24 6E-29 137.4 14.9 110 1-137 222-333 (344)
9 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.4E-24 1.2E-28 136.0 16.1 113 1-136 24-137 (345)
10 2xzm_R RACK1; ribosome, transl 99.9 7.6E-24 2.6E-28 134.2 17.6 112 4-135 38-149 (343)
11 2hes_X YDR267CP; beta-propelle 99.9 2.9E-24 9.8E-29 135.6 15.4 120 1-136 66-185 (330)
12 4h5i_A Guanine nucleotide-exch 99.9 1.5E-24 5E-29 138.7 14.0 114 1-136 227-344 (365)
13 3frx_A Guanine nucleotide-bind 99.9 2.5E-24 8.7E-29 135.3 13.8 114 1-136 25-139 (319)
14 4ery_A WD repeat-containing pr 99.9 1.6E-23 5.6E-28 130.9 16.4 110 1-137 31-140 (312)
15 2pm7_B Protein transport prote 99.9 1.2E-23 4.1E-28 131.1 14.9 114 1-136 17-133 (297)
16 2hes_X YDR267CP; beta-propelle 99.9 1.8E-23 6.2E-28 131.9 15.4 115 1-135 115-230 (330)
17 2pbi_B Guanine nucleotide-bind 99.9 2.7E-23 9.1E-28 132.4 15.9 109 1-136 162-272 (354)
18 4ery_A WD repeat-containing pr 99.9 3.7E-23 1.3E-27 129.3 16.2 110 1-137 73-182 (312)
19 1vyh_C Platelet-activating fac 99.9 1.8E-23 6.1E-28 135.4 14.8 110 1-137 158-267 (410)
20 4g56_B MGC81050 protein; prote 99.9 1.7E-23 5.8E-28 133.4 14.3 109 1-136 234-344 (357)
21 3bg1_A Protein SEC13 homolog; 99.9 1.4E-23 4.7E-28 131.8 13.7 114 1-136 21-137 (316)
22 1nr0_A Actin interacting prote 99.9 3.9E-23 1.3E-27 139.6 16.3 110 1-137 155-272 (611)
23 1got_B GT-beta; complex (GTP-b 99.9 4.6E-23 1.6E-27 130.6 15.6 107 2-136 152-258 (340)
24 4gq1_A NUP37; propeller, trans 99.9 1.7E-24 5.8E-29 139.5 9.2 115 2-137 98-220 (393)
25 1got_B GT-beta; complex (GTP-b 99.9 4.1E-23 1.4E-27 130.8 14.4 106 1-132 234-340 (340)
26 3iz6_a 40S ribosomal protein R 99.9 5.6E-23 1.9E-27 131.9 15.2 115 1-137 257-377 (380)
27 3lrv_A PRE-mRNA-splicing facto 99.9 9.9E-23 3.4E-27 129.1 15.4 111 1-137 133-246 (343)
28 3vl1_A 26S proteasome regulato 99.9 1E-22 3.6E-27 131.5 15.7 110 1-137 105-214 (420)
29 3f3f_A Nucleoporin SEH1; struc 99.9 3.9E-22 1.3E-26 125.3 17.4 124 1-137 19-145 (351)
30 1erj_A Transcriptional repress 99.9 2.1E-22 7E-27 129.8 15.7 110 1-137 131-240 (393)
31 2ymu_A WD-40 repeat protein; u 99.9 1E-22 3.5E-27 136.1 14.2 103 1-132 475-577 (577)
32 2aq5_A Coronin-1A; WD40 repeat 99.9 1.5E-22 5.3E-27 130.5 14.5 117 1-137 89-209 (402)
33 3frx_A Guanine nucleotide-bind 99.9 3E-22 1E-26 125.9 15.2 109 1-137 115-229 (319)
34 2ymu_A WD-40 repeat protein; u 99.9 2.8E-22 9.6E-27 134.0 15.6 107 1-136 24-130 (577)
35 1nr0_A Actin interacting prote 99.9 1.3E-22 4.5E-27 137.0 14.0 111 1-136 456-568 (611)
36 2pbi_B Guanine nucleotide-bind 99.9 2.2E-22 7.7E-27 128.1 14.2 106 1-132 248-354 (354)
37 1erj_A Transcriptional repress 99.9 2.7E-22 9.1E-27 129.2 14.1 122 1-136 264-390 (393)
38 3dm0_A Maltose-binding peripla 99.9 6.3E-22 2.2E-26 135.2 16.4 113 1-135 390-503 (694)
39 4e54_B DNA damage-binding prot 99.9 2.7E-22 9.3E-27 130.7 13.8 112 1-137 127-242 (435)
40 3mmy_A MRNA export factor; mRN 99.9 6.9E-22 2.3E-26 125.3 14.8 111 1-137 47-162 (368)
41 3iz6_a 40S ribosomal protein R 99.9 7.9E-22 2.7E-26 126.6 14.9 109 3-137 216-331 (380)
42 2oaj_A Protein SNI1; WD40 repe 99.9 2.9E-22 9.8E-27 140.3 13.7 123 1-136 443-606 (902)
43 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-21 3.9E-26 124.9 15.2 119 6-136 148-272 (355)
44 2pm7_B Protein transport prote 99.9 2E-21 6.8E-26 121.0 15.8 112 5-134 170-284 (297)
45 4g56_B MGC81050 protein; prote 99.9 9.8E-22 3.3E-26 125.3 14.6 113 1-137 147-260 (357)
46 3k26_A Polycomb protein EED; W 99.9 9.2E-22 3.1E-26 124.7 13.6 105 5-136 85-193 (366)
47 2w18_A PALB2, fancn, partner a 99.9 1E-21 3.6E-26 123.4 13.3 59 65-134 297-356 (356)
48 3f3f_A Nucleoporin SEH1; struc 99.9 2.8E-21 9.6E-26 121.4 15.4 134 1-137 118-339 (351)
49 3dwl_C Actin-related protein 2 99.9 8.5E-22 2.9E-26 125.8 12.7 114 1-135 63-177 (377)
50 4e54_B DNA damage-binding prot 99.9 4.3E-22 1.5E-26 129.7 11.3 112 1-137 217-329 (435)
51 3ei3_B DNA damage-binding prot 99.9 3.9E-21 1.3E-25 123.1 15.6 112 1-137 171-284 (383)
52 3bg1_A Protein SEC13 homolog; 99.9 1.3E-21 4.5E-26 122.8 13.0 110 5-134 179-292 (316)
53 2xzm_R RACK1; ribosome, transl 99.9 4.5E-21 1.5E-25 121.5 15.6 109 1-134 84-202 (343)
54 4aow_A Guanine nucleotide-bind 99.9 2.3E-21 7.7E-26 122.0 13.8 117 1-137 223-339 (340)
55 3jrp_A Fusion protein of prote 99.9 5E-21 1.7E-25 121.8 15.3 114 1-136 19-135 (379)
56 2j04_B YDR362CP, TAU91; beta p 99.9 1.5E-22 5.1E-27 134.6 8.4 109 1-136 318-429 (524)
57 1gxr_A ESG1, transducin-like e 99.9 8.1E-21 2.8E-25 119.2 15.7 112 1-137 105-216 (337)
58 2oit_A Nucleoporin 214KDA; NH2 99.9 8.6E-22 2.9E-26 128.5 11.5 118 1-134 100-222 (434)
59 3vl1_A 26S proteasome regulato 99.9 1.5E-21 5E-26 126.2 12.5 110 1-137 147-280 (420)
60 1pgu_A Actin interacting prote 99.9 4E-21 1.4E-25 129.0 14.7 109 1-135 496-614 (615)
61 3dwl_C Actin-related protein 2 99.9 1.8E-21 6.2E-26 124.2 12.2 123 1-137 108-238 (377)
62 4aow_A Guanine nucleotide-bind 99.9 1.3E-20 4.4E-25 118.6 15.7 114 1-136 46-160 (340)
63 3dm0_A Maltose-binding peripla 99.9 3.9E-21 1.3E-25 131.4 14.1 113 1-137 480-594 (694)
64 3mkq_A Coatomer beta'-subunit; 99.9 7E-21 2.4E-25 131.5 15.5 109 1-136 21-129 (814)
65 2j04_A TAU60, YPL007P, hypothe 99.9 6.5E-21 2.2E-25 126.5 14.6 116 1-137 93-213 (588)
66 2j04_B YDR362CP, TAU91; beta p 99.9 2.6E-21 8.8E-26 128.7 12.5 117 4-136 224-343 (524)
67 1k8k_C P40, ARP2/3 complex 41 99.9 1.1E-20 3.7E-25 120.2 14.6 114 1-137 16-129 (372)
68 1sq9_A Antiviral protein SKI8; 99.9 6.5E-21 2.2E-25 122.3 13.4 111 1-137 241-397 (397)
69 3zwl_B Eukaryotic translation 99.9 2.5E-20 8.4E-25 118.2 15.4 108 1-136 40-152 (369)
70 2oaj_A Protein SNI1; WD40 repe 99.9 6E-21 2E-25 133.7 13.6 126 1-133 496-659 (902)
71 3sfz_A APAF-1, apoptotic pepti 99.9 2.1E-20 7.1E-25 134.1 16.5 111 1-137 623-734 (1249)
72 3odt_A Protein DOA1; ubiquitin 99.9 1.6E-20 5.6E-25 116.8 13.9 107 1-137 192-298 (313)
73 1k8k_C P40, ARP2/3 complex 41 99.9 8.6E-20 2.9E-24 116.1 16.8 124 1-137 104-235 (372)
74 3jrp_A Fusion protein of prote 99.9 3.2E-20 1.1E-24 118.1 14.8 114 4-135 171-287 (379)
75 4aez_A CDC20, WD repeat-contai 99.9 5.9E-20 2E-24 118.5 15.8 109 1-137 142-250 (401)
76 4ggc_A P55CDC, cell division c 99.9 7.5E-20 2.6E-24 114.1 15.7 124 1-137 158-317 (318)
77 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.4E-20 8.3E-25 121.9 14.0 114 1-137 157-273 (450)
78 2aq5_A Coronin-1A; WD40 repeat 99.9 3.2E-20 1.1E-24 119.7 14.2 110 1-137 139-256 (402)
79 3jro_A Fusion protein of prote 99.9 4.4E-20 1.5E-24 127.3 15.7 114 1-136 17-133 (753)
80 3ei3_B DNA damage-binding prot 99.9 3E-20 1E-24 119.0 13.8 109 1-135 126-236 (383)
81 3dw8_B Serine/threonine-protei 99.9 2.5E-20 8.5E-25 121.2 13.6 127 1-134 36-206 (447)
82 3v7d_B Cell division control p 99.9 5.1E-20 1.8E-24 120.5 15.0 108 2-137 129-238 (464)
83 3gre_A Serine/threonine-protei 99.9 8.2E-21 2.8E-25 123.4 11.1 111 2-137 179-294 (437)
84 1gxr_A ESG1, transducin-like e 99.8 2.1E-19 7.3E-24 112.7 16.4 109 1-137 149-257 (337)
85 1sq9_A Antiviral protein SKI8; 99.8 7.5E-20 2.6E-24 117.4 14.6 110 1-137 194-324 (397)
86 2xyi_A Probable histone-bindin 99.8 8.4E-20 2.9E-24 118.8 14.9 113 1-135 239-353 (430)
87 3i2n_A WD repeat-containing pr 99.8 3.3E-20 1.1E-24 117.3 12.6 124 1-137 217-355 (357)
88 4a11_B DNA excision repair pro 99.8 6.5E-20 2.2E-24 117.7 14.2 135 1-137 194-367 (408)
89 3mkq_A Coatomer beta'-subunit; 99.8 3.9E-20 1.3E-24 127.9 13.9 111 1-137 63-174 (814)
90 2pm9_A Protein WEB1, protein t 99.8 3.2E-20 1.1E-24 119.6 12.6 111 1-137 222-339 (416)
91 2xyi_A Probable histone-bindin 99.8 1.1E-19 3.8E-24 118.3 15.0 120 1-136 189-310 (430)
92 3vu4_A KMHSV2; beta-propeller 99.8 6.7E-20 2.3E-24 116.7 13.7 120 1-136 203-337 (355)
93 1r5m_A SIR4-interacting protei 99.8 1.2E-19 4E-24 116.9 14.9 120 1-137 53-182 (425)
94 4ggc_A P55CDC, cell division c 99.8 8.1E-20 2.8E-24 114.0 13.7 118 1-137 33-183 (318)
95 3dw8_B Serine/threonine-protei 99.8 1.1E-19 3.7E-24 118.2 14.8 111 1-135 185-315 (447)
96 1r5m_A SIR4-interacting protei 99.8 6E-20 2E-24 118.3 13.0 108 1-136 255-362 (425)
97 3lrv_A PRE-mRNA-splicing facto 99.8 1E-19 3.6E-24 115.2 13.8 125 2-137 45-203 (343)
98 3sfz_A APAF-1, apoptotic pepti 99.8 1.3E-19 4.5E-24 130.0 15.4 109 1-136 665-775 (1249)
99 3v7d_B Cell division control p 99.8 2.3E-19 8E-24 117.4 15.4 107 2-137 277-383 (464)
100 1yfq_A Cell cycle arrest prote 99.8 9.1E-20 3.1E-24 114.9 12.5 109 1-135 19-131 (342)
101 4gga_A P55CDC, cell division c 99.8 2.7E-19 9.1E-24 116.1 14.8 108 1-136 284-396 (420)
102 2j04_A TAU60, YPL007P, hypothe 99.8 1.6E-19 5.6E-24 119.9 13.4 116 1-137 137-256 (588)
103 2vdu_B TRNA (guanine-N(7)-)-me 99.8 2.3E-19 7.8E-24 117.3 14.0 118 1-137 110-231 (450)
104 4gq1_A NUP37; propeller, trans 99.8 8.2E-20 2.8E-24 117.8 11.5 117 4-137 155-288 (393)
105 4a11_B DNA excision repair pro 99.8 1.1E-18 3.8E-23 112.0 16.5 118 3-137 154-278 (408)
106 3i2n_A WD repeat-containing pr 99.8 8.5E-20 2.9E-24 115.4 11.0 113 1-136 176-292 (357)
107 4aez_A CDC20, WD repeat-contai 99.8 7.5E-19 2.6E-23 113.3 15.3 109 4-137 185-295 (401)
108 2pm9_A Protein WEB1, protein t 99.8 4.3E-19 1.5E-23 114.4 14.0 112 1-137 173-296 (416)
109 3zwl_B Eukaryotic translation 99.8 6.3E-19 2.2E-23 111.7 14.4 108 1-136 226-347 (369)
110 4h5i_A Guanine nucleotide-exch 99.8 6.6E-19 2.3E-23 112.6 14.3 115 1-137 184-302 (365)
111 3gre_A Serine/threonine-protei 99.8 3.5E-19 1.2E-23 115.8 13.1 122 1-137 119-247 (437)
112 1pgu_A Actin interacting prote 99.8 1.6E-18 5.6E-23 116.4 16.5 109 1-137 168-285 (615)
113 3odt_A Protein DOA1; ubiquitin 99.8 9.8E-19 3.3E-23 108.8 14.3 104 4-137 154-257 (313)
114 3mmy_A MRNA export factor; mRN 99.8 4.5E-19 1.5E-23 112.4 12.4 67 1-84 94-162 (368)
115 3jro_A Fusion protein of prote 99.8 7.7E-19 2.7E-23 121.2 14.2 114 1-136 61-190 (753)
116 3k26_A Polycomb protein EED; W 99.8 1.2E-18 4.2E-23 110.4 13.3 111 5-137 34-149 (366)
117 1p22_A F-BOX/WD-repeat protein 99.8 3.9E-18 1.3E-22 111.0 15.2 105 2-137 140-244 (435)
118 1yfq_A Cell cycle arrest prote 99.8 2.1E-18 7.2E-23 108.6 13.3 114 2-137 159-284 (342)
119 4gga_A P55CDC, cell division c 99.8 1.5E-17 5E-22 108.0 16.6 109 1-137 155-263 (420)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 5.5E-18 1.9E-22 110.5 14.4 105 2-137 126-230 (445)
121 1p22_A F-BOX/WD-repeat protein 99.8 1.6E-17 5.5E-22 108.1 13.1 102 4-136 265-366 (435)
122 2ovr_B FBW7, F-BOX/WD repeat p 99.7 9.1E-17 3.1E-21 104.8 14.1 102 5-137 209-310 (445)
123 2w18_A PALB2, fancn, partner a 99.7 6.7E-17 2.3E-21 101.8 11.6 99 13-137 155-271 (356)
124 2oit_A Nucleoporin 214KDA; NH2 99.7 3.4E-16 1.2E-20 102.2 14.8 115 1-136 157-279 (434)
125 3bws_A Protein LP49; two-domai 99.7 2.6E-16 8.9E-21 102.1 11.4 110 1-137 130-245 (433)
126 1l0q_A Surface layer protein; 99.7 3E-15 1E-19 95.9 13.3 108 1-137 39-149 (391)
127 3bws_A Protein LP49; two-domai 99.7 2.1E-15 7.3E-20 97.8 12.7 109 1-137 177-294 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.2E-14 4.1E-19 94.4 15.4 108 1-137 186-302 (415)
129 1l0q_A Surface layer protein; 99.6 3.2E-14 1.1E-18 91.2 14.3 108 1-137 123-235 (391)
130 1nir_A Nitrite reductase; hemo 99.6 4.3E-14 1.5E-18 94.7 13.3 108 1-137 145-259 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.6 3.3E-13 1.1E-17 87.7 14.7 104 5-137 143-258 (415)
132 2ojh_A Uncharacterized protein 99.6 2.1E-13 7.1E-18 83.9 13.1 112 1-137 136-260 (297)
133 2ecf_A Dipeptidyl peptidase IV 99.5 1.6E-13 5.6E-18 94.4 12.2 107 1-137 44-183 (741)
134 3o4h_A Acylamino-acid-releasin 99.5 3.9E-14 1.3E-18 95.3 8.8 104 1-133 157-274 (582)
135 1ri6_A Putative isomerase YBHE 99.5 4.1E-13 1.4E-17 84.4 11.1 113 1-135 45-160 (343)
136 1xfd_A DIP, dipeptidyl aminope 99.5 1.5E-13 5.2E-18 94.3 9.4 110 1-137 24-145 (723)
137 1xfd_A DIP, dipeptidyl aminope 99.5 3.5E-13 1.2E-17 92.5 10.6 99 1-125 68-193 (723)
138 2ecf_A Dipeptidyl peptidase IV 99.5 1E-12 3.4E-17 90.5 12.3 99 1-126 116-230 (741)
139 2ojh_A Uncharacterized protein 99.5 1.3E-12 4.3E-17 80.4 11.4 107 1-134 49-159 (297)
140 1nir_A Nitrite reductase; hemo 99.5 5.7E-12 1.9E-16 84.5 15.0 112 1-136 186-312 (543)
141 1k32_A Tricorn protease; prote 99.5 2E-12 7E-17 92.2 12.7 108 1-137 345-463 (1045)
142 1ri6_A Putative isomerase YBHE 99.4 2.9E-11 9.8E-16 76.0 15.6 119 1-134 136-261 (343)
143 3hfq_A Uncharacterized protein 99.4 1.8E-11 6.2E-16 77.4 14.3 114 1-133 194-315 (347)
144 2z3z_A Dipeptidyl aminopeptida 99.4 3.8E-12 1.3E-16 87.3 11.6 122 1-136 128-294 (706)
145 1k32_A Tricorn protease; prote 99.4 3E-12 1E-16 91.4 11.3 106 1-134 386-501 (1045)
146 1jmx_B Amine dehydrogenase; ox 99.4 6.9E-12 2.4E-16 79.0 11.8 111 1-136 7-135 (349)
147 3vgz_A Uncharacterized protein 99.4 1.5E-11 5.2E-16 77.6 13.1 111 1-137 148-264 (353)
148 1z68_A Fibroblast activation p 99.4 1.1E-12 3.7E-17 90.2 8.3 107 1-137 23-141 (719)
149 3hfq_A Uncharacterized protein 99.4 4.5E-12 1.6E-16 80.2 10.6 116 1-134 47-170 (347)
150 3vgz_A Uncharacterized protein 99.4 1.9E-11 6.4E-16 77.2 12.8 111 1-137 96-217 (353)
151 3scy_A Hypothetical bacterial 99.4 2.4E-11 8.1E-16 77.3 13.1 113 1-134 218-336 (361)
152 3u4y_A Uncharacterized protein 99.4 2.9E-11 1E-15 75.9 12.6 109 2-137 6-119 (331)
153 1z68_A Fibroblast activation p 99.4 5E-12 1.7E-16 86.9 9.6 96 1-125 67-189 (719)
154 3u4y_A Uncharacterized protein 99.4 1.4E-10 4.8E-15 72.8 15.2 113 1-137 91-209 (331)
155 4a5s_A Dipeptidyl peptidase 4 99.3 1.8E-11 6.2E-16 84.7 10.3 106 1-137 24-143 (740)
156 3o4h_A Acylamino-acid-releasin 99.3 3.3E-11 1.1E-15 81.2 11.3 105 1-137 117-229 (582)
157 1pby_B Quinohemoprotein amine 99.3 3.4E-11 1.2E-15 75.4 10.6 108 1-137 41-165 (337)
158 3azo_A Aminopeptidase; POP fam 99.3 2.4E-11 8.4E-16 82.8 9.8 117 1-136 137-275 (662)
159 3scy_A Hypothetical bacterial 99.3 9.4E-10 3.2E-14 70.0 16.0 122 1-134 162-290 (361)
160 1jof_A Carboxy-CIS,CIS-muconat 99.3 7E-10 2.4E-14 70.9 15.1 115 1-134 90-223 (365)
161 1pby_B Quinohemoprotein amine 99.3 2.1E-10 7.1E-15 71.9 12.3 107 6-137 2-126 (337)
162 1jof_A Carboxy-CIS,CIS-muconat 99.2 6.8E-10 2.3E-14 70.9 14.0 120 1-134 152-290 (365)
163 1xip_A Nucleoporin NUP159; bet 99.2 3.8E-10 1.3E-14 72.7 12.2 97 4-136 96-192 (388)
164 1jmx_B Amine dehydrogenase; ox 99.2 2.3E-10 7.9E-15 72.1 10.0 110 1-137 50-177 (349)
165 2z3z_A Dipeptidyl aminopeptida 99.2 9.2E-10 3.1E-14 75.6 13.1 108 1-136 317-436 (706)
166 4a5s_A Dipeptidyl peptidase 4 99.2 4.4E-10 1.5E-14 77.8 10.7 96 1-125 69-191 (740)
167 3azo_A Aminopeptidase; POP fam 99.1 1.7E-09 5.7E-14 73.9 12.5 109 1-133 195-321 (662)
168 3pe7_A Oligogalacturonate lyas 99.1 1.9E-09 6.4E-14 69.0 12.0 110 1-137 43-179 (388)
169 1q7f_A NHL, brain tumor CG1071 99.1 8.4E-09 2.9E-13 63.6 14.2 108 1-136 171-281 (286)
170 2bkl_A Prolyl endopeptidase; m 99.0 1.6E-09 5.6E-14 74.6 9.5 112 1-135 128-261 (695)
171 2xdw_A Prolyl endopeptidase; a 99.0 7.3E-09 2.5E-13 71.5 11.6 111 1-135 132-268 (710)
172 1q7f_A NHL, brain tumor CG1071 99.0 3.9E-08 1.3E-12 60.6 13.1 108 1-135 128-238 (286)
173 2dg1_A DRP35, lactonase; beta 99.0 8E-09 2.7E-13 64.9 10.2 107 1-137 13-123 (333)
174 3fvz_A Peptidyl-glycine alpha- 99.0 3.6E-08 1.2E-12 62.2 13.1 112 1-137 98-229 (329)
175 3pe7_A Oligogalacturonate lyas 98.9 5.9E-08 2E-12 62.1 13.4 108 1-136 88-226 (388)
176 3fvz_A Peptidyl-glycine alpha- 98.9 1.1E-07 3.8E-12 60.0 14.4 111 1-134 31-174 (329)
177 1rwi_B Serine/threonine-protei 98.9 4.9E-08 1.7E-12 59.5 12.2 109 2-137 158-266 (270)
178 2dg1_A DRP35, lactonase; beta 98.9 9.8E-08 3.3E-12 60.0 13.5 108 1-135 52-171 (333)
179 1qks_A Cytochrome CD1 nitrite 98.9 9.8E-08 3.4E-12 64.6 13.8 106 3-137 165-277 (567)
180 2oiz_A Aromatic amine dehydrog 98.9 2.7E-08 9.3E-13 63.6 10.3 106 4-137 14-142 (361)
181 3no2_A Uncharacterized protein 98.9 1.3E-07 4.5E-12 58.4 12.2 101 3-133 3-106 (276)
182 2oiz_A Aromatic amine dehydrog 98.8 2.5E-07 8.4E-12 59.2 13.1 66 57-136 259-335 (361)
183 1xip_A Nucleoporin NUP159; bet 98.8 5.3E-08 1.8E-12 62.9 9.3 112 2-137 46-157 (388)
184 2gop_A Trilobed protease; beta 98.8 2.4E-07 8.1E-12 58.5 11.4 92 1-125 66-190 (347)
185 1rwi_B Serine/threonine-protei 98.8 4.8E-07 1.7E-11 55.1 12.3 108 2-136 116-223 (270)
186 2bkl_A Prolyl endopeptidase; m 98.7 5.4E-07 1.8E-11 62.2 13.2 111 1-136 175-305 (695)
187 3c5m_A Oligogalacturonate lyas 98.7 2E-08 6.8E-13 64.3 5.8 68 1-84 43-113 (396)
188 3dsm_A Uncharacterized protein 98.7 4.5E-07 1.5E-11 57.2 11.9 109 1-134 179-301 (328)
189 1yr2_A Prolyl oligopeptidase; 98.7 8.3E-08 2.8E-12 66.7 9.0 111 1-136 170-304 (741)
190 3e5z_A Putative gluconolactona 98.7 1E-06 3.5E-11 54.5 13.1 108 1-137 179-288 (296)
191 2xdw_A Prolyl endopeptidase; a 98.7 1.1E-06 3.8E-11 60.8 14.2 113 1-136 178-321 (710)
192 3c5m_A Oligogalacturonate lyas 98.7 5.9E-07 2E-11 57.4 11.4 102 1-133 245-380 (396)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.3E-06 4.4E-11 54.3 12.4 112 3-135 185-299 (314)
194 3e5z_A Putative gluconolactona 98.6 1.1E-06 3.9E-11 54.4 11.4 96 1-121 35-131 (296)
195 3sjl_D Methylamine dehydrogena 98.6 1.3E-06 4.4E-11 56.4 11.7 108 2-137 41-171 (386)
196 3no2_A Uncharacterized protein 98.6 1.3E-06 4.3E-11 54.0 11.1 109 1-134 44-154 (276)
197 1qks_A Cytochrome CD1 nitrite 98.6 6.2E-06 2.1E-10 56.0 14.6 115 1-135 204-329 (567)
198 2gop_A Trilobed protease; beta 98.6 4.5E-06 1.6E-10 52.6 12.6 98 2-134 223-330 (347)
199 3dsm_A Uncharacterized protein 98.5 6.5E-06 2.2E-10 52.0 12.2 104 5-137 141-255 (328)
200 3g4e_A Regucalcin; six bladed 98.5 1.7E-05 5.9E-10 49.2 13.8 82 52-137 149-231 (297)
201 2mad_H Methylamine dehydrogena 98.5 2.1E-05 7.2E-10 50.7 14.3 107 2-137 29-158 (373)
202 2z2n_A Virginiamycin B lyase; 98.5 1.4E-05 4.9E-10 49.1 13.0 105 2-133 65-169 (299)
203 2z2n_A Virginiamycin B lyase; 98.4 3.9E-05 1.3E-09 47.1 14.1 104 2-133 107-211 (299)
204 3g4e_A Regucalcin; six bladed 98.4 1.9E-05 6.4E-10 49.1 12.5 103 1-123 156-260 (297)
205 3iuj_A Prolyl endopeptidase; h 98.4 1.9E-06 6.6E-11 59.6 8.6 110 1-136 136-269 (693)
206 2mad_H Methylamine dehydrogena 98.4 4E-05 1.4E-09 49.4 13.7 103 1-133 73-194 (373)
207 3hrp_A Uncharacterized protein 98.3 2.6E-05 8.8E-10 50.8 12.3 111 1-136 138-250 (409)
208 2qc5_A Streptogramin B lactona 98.3 0.00011 3.7E-09 45.2 14.2 106 2-134 28-133 (300)
209 1yr2_A Prolyl oligopeptidase; 98.3 7.8E-05 2.7E-09 52.0 14.4 112 1-135 216-350 (741)
210 3c75_H MADH, methylamine dehyd 98.3 2.8E-05 9.7E-10 51.0 11.0 107 3-137 82-211 (426)
211 2qc5_A Streptogramin B lactona 98.2 0.0001 3.6E-09 45.2 13.0 105 2-133 70-174 (300)
212 3dr2_A Exported gluconolactona 98.2 4.4E-05 1.5E-09 47.6 11.3 94 1-121 52-147 (305)
213 3dr2_A Exported gluconolactona 98.2 3.3E-05 1.1E-09 48.1 10.7 108 1-135 93-224 (305)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 0.00012 4.2E-09 45.3 12.8 81 52-137 172-258 (314)
215 3sjl_D Methylamine dehydrogena 98.2 3.9E-05 1.3E-09 49.6 10.3 106 1-135 85-208 (386)
216 3hrp_A Uncharacterized protein 98.2 0.00011 3.8E-09 47.9 12.4 117 1-135 178-298 (409)
217 2hz6_A Endoplasmic reticulum t 98.1 5E-07 1.7E-11 58.0 0.7 63 4-84 8-70 (369)
218 2ghs_A AGR_C_1268P; regucalcin 98.0 0.0007 2.4E-08 42.6 14.4 101 1-123 186-290 (326)
219 2qe8_A Uncharacterized protein 98.0 0.00016 5.4E-09 45.9 10.4 123 1-137 24-156 (343)
220 2hz6_A Endoplasmic reticulum t 97.9 4.7E-07 1.6E-11 58.2 -1.7 104 3-137 47-151 (369)
221 3c75_H MADH, methylamine dehyd 97.9 0.00025 8.7E-09 46.5 10.5 69 57-137 324-404 (426)
222 1mda_H Methylamine dehydrogena 97.9 0.00015 5.1E-09 46.7 9.1 101 6-134 33-157 (368)
223 1kb0_A Quinohemoprotein alcoho 97.9 0.00037 1.3E-08 48.4 11.5 53 73-137 457-509 (677)
224 2ghs_A AGR_C_1268P; regucalcin 97.8 0.00093 3.2E-08 42.1 12.0 77 52-134 179-259 (326)
225 3iuj_A Prolyl endopeptidase; h 97.8 0.0014 4.7E-08 45.6 13.1 114 1-136 182-315 (693)
226 1yiq_A Quinohemoprotein alcoho 97.8 0.00057 1.9E-08 47.6 10.9 27 110-137 481-507 (689)
227 2ece_A 462AA long hypothetical 97.7 0.0032 1.1E-07 41.7 13.4 116 1-134 195-351 (462)
228 2iwa_A Glutamine cyclotransfer 97.7 0.002 6.9E-08 39.7 11.4 109 2-135 113-237 (266)
229 2xe4_A Oligopeptidase B; hydro 97.7 0.00033 1.1E-08 49.2 8.6 110 1-136 181-305 (751)
230 2iwa_A Glutamine cyclotransfer 97.6 0.0023 7.7E-08 39.4 10.8 107 1-137 28-137 (266)
231 2ece_A 462AA long hypothetical 97.6 0.0049 1.7E-07 40.9 12.7 113 3-137 93-239 (462)
232 2qe8_A Uncharacterized protein 97.5 0.0063 2.2E-07 38.5 13.1 114 2-132 75-221 (343)
233 1k3i_A Galactose oxidase precu 97.5 0.0033 1.1E-07 43.5 11.4 110 4-136 197-324 (656)
234 1mda_H Methylamine dehydrogena 97.4 0.0088 3E-07 38.6 12.2 69 57-137 269-348 (368)
235 3nol_A Glutamine cyclotransfer 97.4 0.0032 1.1E-07 38.6 9.0 103 4-137 52-157 (262)
236 3pbp_A Nucleoporin NUP82; beta 97.4 0.0083 2.8E-07 39.5 11.2 123 1-130 73-207 (452)
237 1fwx_A Nitrous oxide reductase 97.3 0.0035 1.2E-07 42.9 9.6 79 53-135 278-361 (595)
238 3nok_A Glutaminyl cyclase; bet 97.3 0.0086 3E-07 36.9 10.2 101 4-137 64-166 (268)
239 1fwx_A Nitrous oxide reductase 97.1 0.0033 1.1E-07 43.0 8.1 131 1-137 284-433 (595)
240 2xe4_A Oligopeptidase B; hydro 97.1 0.015 5.1E-07 41.0 11.3 70 1-83 228-305 (751)
241 2ad6_A Methanol dehydrogenase 96.9 0.021 7E-07 39.1 10.1 22 116-137 475-496 (571)
242 3mbr_X Glutamine cyclotransfer 96.9 0.03 1E-06 34.0 10.6 102 5-137 31-135 (243)
243 1npe_A Nidogen, entactin; glyc 96.8 0.033 1.1E-06 33.8 14.5 104 5-135 91-198 (267)
244 3pbp_A Nucleoporin NUP82; beta 96.6 0.072 2.5E-06 35.3 13.0 82 53-135 67-158 (452)
245 1flg_A Protein (quinoprotein e 96.6 0.078 2.7E-06 36.4 11.5 22 116-137 497-518 (582)
246 2p4o_A Hypothetical protein; p 96.6 0.059 2E-06 33.5 14.3 105 1-134 39-146 (306)
247 1kv9_A Type II quinohemoprotei 96.5 0.027 9.1E-07 39.3 9.0 53 73-137 438-490 (668)
248 3nol_A Glutamine cyclotransfer 96.5 0.06 2E-06 33.1 10.8 66 53-123 173-243 (262)
249 1kb0_A Quinohemoprotein alcoho 96.5 0.043 1.5E-06 38.3 9.9 31 54-84 479-509 (677)
250 1npe_A Nidogen, entactin; glyc 96.5 0.062 2.1E-06 32.6 15.4 104 5-135 48-155 (267)
251 1yiq_A Quinohemoprotein alcoho 96.4 0.031 1E-06 39.1 8.8 27 58-84 481-507 (689)
252 3mbr_X Glutamine cyclotransfer 96.2 0.096 3.3E-06 31.9 10.6 102 6-137 76-181 (243)
253 3tc9_A Hypothetical hydrolase; 96.1 0.15 5E-06 33.6 11.0 72 53-134 227-300 (430)
254 3hxj_A Pyrrolo-quinoline quino 96.1 0.11 3.8E-06 32.2 10.0 58 6-81 108-165 (330)
255 3q7m_A Lipoprotein YFGL, BAMB; 96.1 0.13 4.4E-06 32.8 12.5 105 4-137 52-164 (376)
256 3q7m_A Lipoprotein YFGL, BAMB; 96.1 0.14 4.6E-06 32.7 10.7 57 63-132 318-375 (376)
257 3tc9_A Hypothetical hydrolase; 95.9 0.19 6.6E-06 33.1 10.3 76 51-136 178-258 (430)
258 2fp8_A Strictosidine synthase; 95.9 0.16 5.3E-06 31.8 10.5 108 1-135 192-313 (322)
259 3hxj_A Pyrrolo-quinoline quino 95.8 0.16 5.5E-06 31.5 9.2 55 4-79 147-201 (330)
260 2p9w_A MAL S 1 allergenic prot 95.8 0.2 6.8E-06 32.0 11.8 77 53-135 138-215 (334)
261 1w6s_A Methanol dehydrogenase 95.7 0.21 7.1E-06 34.5 10.1 22 116-137 484-505 (599)
262 3qqz_A Putative uncharacterize 95.7 0.17 5.7E-06 31.0 12.3 123 3-135 79-204 (255)
263 3v65_B Low-density lipoprotein 95.7 0.22 7.7E-06 32.2 14.1 75 51-135 201-277 (386)
264 1n7d_A LDL receptor, low-densi 95.6 0.11 3.8E-06 36.5 8.6 74 52-135 496-571 (699)
265 3v64_C Agrin; beta propeller, 95.5 0.25 8.4E-06 31.6 15.0 75 51-135 158-234 (349)
266 3nok_A Glutaminyl cyclase; bet 95.3 0.27 9.2E-06 30.4 13.1 102 6-137 107-212 (268)
267 2p4o_A Hypothetical protein; p 95.2 0.3 1E-05 30.3 12.4 84 38-136 20-105 (306)
268 2fp8_A Strictosidine synthase; 95.0 0.34 1.2E-05 30.2 13.2 114 1-136 26-175 (322)
269 1ijq_A LDL receptor, low-densi 95.0 0.36 1.2E-05 30.3 15.0 74 52-135 120-195 (316)
270 3qqz_A Putative uncharacterize 94.6 0.41 1.4E-05 29.3 12.4 115 2-134 35-150 (255)
271 3sov_A LRP-6, low-density lipo 94.3 0.57 1.9E-05 29.5 15.1 75 51-135 121-197 (318)
272 3p5b_L Low density lipoprotein 94.2 0.7 2.4E-05 30.1 14.7 74 51-135 201-277 (400)
273 1tl2_A L10, protein (tachylect 93.9 0.31 1.1E-05 29.4 6.3 68 54-129 90-157 (236)
274 1k3i_A Galactose oxidase precu 93.8 0.68 2.3E-05 32.2 8.7 88 37-136 175-275 (656)
275 3v65_B Low-density lipoprotein 93.5 0.96 3.3E-05 29.3 12.9 73 53-135 160-234 (386)
276 3m0c_C LDL receptor, low-densi 93.4 1.5 5.2E-05 31.5 14.8 75 51-135 513-589 (791)
277 4gq2_M Nucleoporin NUP120; bet 93.4 1.7 5.8E-05 32.0 11.6 32 53-84 237-268 (950)
278 4hw6_A Hypothetical protein, I 93.1 1.2 4.1E-05 29.4 10.3 76 51-136 181-260 (433)
279 3v64_C Agrin; beta propeller, 92.9 1.1 3.8E-05 28.5 14.6 74 52-135 116-191 (349)
280 2ad6_A Methanol dehydrogenase 92.3 1.2 3.9E-05 30.7 8.0 23 62-84 474-496 (571)
281 1kv9_A Type II quinohemoprotei 92.1 2.2 7.5E-05 29.9 9.9 73 56-137 234-335 (668)
282 3sre_A PON1, serum paraoxonase 92.0 1.6 5.5E-05 28.1 13.5 98 14-134 138-251 (355)
283 3kya_A Putative phosphatase; s 90.6 2.9 9.8E-05 28.4 11.3 77 53-134 187-277 (496)
284 1ijq_A LDL receptor, low-densi 90.3 2.2 7.6E-05 26.7 14.2 72 52-134 77-151 (316)
285 1n7d_A LDL receptor, low-densi 90.0 1.2 3.9E-05 31.5 6.3 70 54-133 455-526 (699)
286 3m0c_C LDL receptor, low-densi 89.5 4.6 0.00016 29.2 14.0 73 52-135 471-546 (791)
287 1flg_A Protein (quinoprotein e 89.4 3 0.0001 28.8 7.9 23 62-84 496-518 (582)
288 1cru_A Protein (soluble quinop 89.2 3.6 0.00012 27.5 13.4 108 1-124 34-163 (454)
289 2xn4_A Kelch-like protein 2; s 88.9 2.8 9.5E-05 25.8 10.7 21 116-136 252-277 (302)
290 2ism_A Putative oxidoreductase 88.0 3.7 0.00013 26.2 13.2 102 1-123 38-153 (352)
291 2be1_A Serine/threonine-protei 87.6 2.8 9.5E-05 26.9 6.4 109 6-137 11-132 (339)
292 4gq2_M Nucleoporin NUP120; bet 87.6 6.9 0.00024 28.9 11.8 32 105-137 237-268 (950)
293 3a9g_A Putative uncharacterize 87.2 4.3 0.00015 26.0 12.2 104 1-123 36-153 (354)
294 2vpj_A Kelch-like protein 12; 86.9 3.7 0.00013 25.1 10.9 64 62-136 206-279 (301)
295 3sbq_A Nitrous-oxide reductase 86.8 2.6 9E-05 29.4 6.1 78 1-82 330-408 (638)
296 3amr_A 3-phytase; beta-propell 86.1 5.2 0.00018 25.9 14.8 113 7-134 145-262 (355)
297 4fhn_B Nucleoporin NUP120; pro 85.5 0.64 2.2E-05 34.7 3.1 32 105-137 239-270 (1139)
298 4hw6_A Hypothetical protein, I 84.1 7.1 0.00024 25.8 12.6 65 4-82 239-304 (433)
299 3sbq_A Nitrous-oxide reductase 83.8 6.5 0.00022 27.5 6.9 81 52-135 323-408 (638)
300 3p5b_L Low density lipoprotein 83.5 7.2 0.00024 25.4 15.2 74 51-135 158-234 (400)
301 4fhn_B Nucleoporin NUP120; pro 83.1 3.6 0.00012 30.9 6.0 32 53-84 239-270 (1139)
302 1tl2_A L10, protein (tachylect 83.1 5.8 0.0002 24.1 8.1 74 52-133 41-114 (236)
303 3das_A Putative oxidoreductase 82.8 7.4 0.00025 25.1 13.4 109 1-123 39-158 (347)
304 2xzh_A Clathrin heavy chain 1; 82.6 7.8 0.00027 25.2 12.3 109 1-135 74-189 (365)
305 3ei3_A DNA damage-binding prot 82.3 14 0.00049 28.0 14.2 72 52-135 514-591 (1158)
306 1w6s_A Methanol dehydrogenase 82.2 10 0.00036 26.4 9.1 19 66-84 124-142 (599)
307 4a2l_A BT_4663, two-component 81.8 12 0.00041 26.7 13.6 104 4-135 416-526 (795)
308 1xi4_A Clathrin heavy chain; a 81.3 19 0.00063 28.6 9.4 104 1-135 73-188 (1630)
309 1zgk_A Kelch-like ECH-associat 80.4 8 0.00028 23.9 10.3 21 116-136 216-241 (308)
310 4a2l_A BT_4663, two-component 80.3 14 0.00047 26.4 15.0 73 51-136 405-481 (795)
311 3kya_A Putative phosphatase; s 80.1 12 0.0004 25.6 13.7 77 54-133 249-339 (496)
312 3s94_A LRP-6, low-density lipo 79.4 14 0.00046 25.9 13.6 105 5-135 96-202 (619)
313 2g8s_A Glucose/sorbosone dehyd 79.2 10 0.00034 24.3 10.3 21 1-22 25-46 (353)
314 2xn4_A Kelch-like protein 2; s 78.6 9.1 0.00031 23.4 10.6 21 116-136 205-230 (302)
315 2p9w_A MAL S 1 allergenic prot 78.5 11 0.00037 24.3 11.9 111 4-133 24-166 (334)
316 1bpo_A Protein (clathrin); cla 77.6 14 0.00048 25.1 10.9 109 1-135 73-188 (494)
317 4asc_A Kelch repeat and BTB do 77.2 10 0.00036 23.4 10.6 22 62-83 196-222 (315)
318 3f7f_A Nucleoporin NUP120; nuc 77.0 2.5 8.4E-05 30.2 3.3 30 105-137 223-252 (729)
319 2ism_A Putative oxidoreductase 76.6 12 0.00041 23.8 10.4 76 51-134 30-113 (352)
320 2xbg_A YCF48-like protein; pho 76.1 12 0.00041 23.5 13.0 79 37-131 151-230 (327)
321 3ii7_A Kelch-like protein 7; p 75.6 11 0.00039 23.1 11.3 44 37-83 79-128 (306)
322 1zgk_A Kelch-like ECH-associat 75.6 12 0.0004 23.1 10.9 21 116-136 263-288 (308)
323 3sre_A PON1, serum paraoxonase 75.6 14 0.00047 23.9 7.3 63 52-123 221-285 (355)
324 2vpj_A Kelch-like protein 12; 75.5 11 0.00039 23.0 12.2 21 116-136 207-232 (301)
325 2g8s_A Glucose/sorbosone dehyd 73.7 15 0.00051 23.5 7.3 66 52-122 18-87 (353)
326 4a0p_A LRP6, LRP-6, low-densit 72.6 22 0.00075 24.9 14.4 73 52-135 80-155 (628)
327 2xbg_A YCF48-like protein; pho 70.2 17 0.00059 22.8 13.6 79 38-128 194-272 (327)
328 2xzh_A Clathrin heavy chain 1; 69.5 20 0.0007 23.3 10.8 74 51-135 259-332 (365)
329 4a0p_A LRP6, LRP-6, low-densit 69.0 27 0.00092 24.5 14.0 98 13-135 13-111 (628)
330 3sov_A LRP-6, low-density lipo 68.0 20 0.00067 22.6 14.5 73 52-136 166-239 (318)
331 2uvk_A YJHT; unknown function, 67.5 20 0.0007 22.5 7.8 22 116-137 317-344 (357)
332 3v9f_A Two-component system se 66.8 32 0.0011 24.6 12.7 72 51-136 449-525 (781)
333 3f7f_A Nucleoporin NUP120; nuc 66.1 12 0.00042 26.8 4.8 30 53-84 223-252 (729)
334 4asc_A Kelch repeat and BTB do 64.2 23 0.00077 21.9 10.5 21 116-136 197-222 (315)
335 2zwa_A Leucine carboxyl methyl 64.1 36 0.0012 24.2 10.9 70 61-137 499-579 (695)
336 1bpo_A Protein (clathrin); cla 62.8 34 0.0011 23.4 11.3 73 52-135 259-331 (494)
337 1cru_A Protein (soluble quinop 61.7 33 0.0011 22.9 9.4 69 51-123 26-99 (454)
338 3ei3_A DNA damage-binding prot 58.0 62 0.0021 24.9 14.4 74 51-133 553-634 (1158)
339 3das_A Putative oxidoreductase 56.9 37 0.0013 21.9 11.6 61 50-114 30-90 (347)
340 3a9g_A Putative uncharacterize 56.0 37 0.0013 21.7 9.6 76 51-134 28-113 (354)
341 3s94_A LRP-6, low-density lipo 55.8 50 0.0017 23.2 14.7 75 51-135 434-510 (619)
342 3ii7_A Kelch-like protein 7; p 55.8 33 0.0011 21.0 11.4 104 6-136 13-128 (306)
343 2woz_A Kelch repeat and BTB do 55.4 34 0.0012 21.1 11.1 21 116-136 254-288 (318)
344 1ukf_A Avirulence protein AVRP 54.7 9.8 0.00033 22.2 2.3 34 104-137 119-152 (188)
345 2woz_A Kelch repeat and BTB do 53.1 38 0.0013 20.9 9.8 21 116-136 207-232 (318)
346 3amr_A 3-phytase; beta-propell 48.7 53 0.0018 21.4 13.0 78 52-134 128-209 (355)
347 3v9f_A Two-component system se 45.7 80 0.0028 22.6 13.3 73 51-137 406-480 (781)
348 3mwp_A Nucleoprotein; structur 39.2 6.3 0.00022 26.4 -0.0 17 121-137 162-178 (577)
349 2zwa_A Leucine carboxyl methyl 38.7 1.1E+02 0.0036 21.9 12.7 116 4-136 500-636 (695)
350 4gz8_A Semaphorin-3A; multi-do 38.4 1.1E+02 0.0037 22.0 10.5 64 65-130 431-495 (667)
351 2wg3_C Hedgehog-interacting pr 34.9 1E+02 0.0036 20.8 14.4 21 104-125 139-159 (463)
352 3zwu_A Alkaline phosphatase PH 34.9 1.2E+02 0.0041 21.4 8.4 58 54-122 478-548 (592)
353 1q47_A Semaphorin 3A; beta pro 34.3 1.1E+02 0.0038 20.9 8.6 74 53-130 405-487 (495)
354 3enb_A PRE-mRNA-processing-spl 31.5 39 0.0013 20.1 2.4 20 118-137 29-48 (222)
355 3in6_A FMN-binding protein; st 29.7 43 0.0015 18.8 2.3 16 6-21 33-48 (148)
356 1xi4_A Clathrin heavy chain; a 28.6 2.4E+02 0.0082 23.0 7.9 32 53-84 260-291 (1630)
357 3s25_A Hypothetical 7-bladed b 26.5 1.2E+02 0.0042 18.9 9.7 24 58-81 110-137 (302)
358 3al9_A Plexin-A2; beta-propell 25.3 1.7E+02 0.0059 20.3 8.5 73 53-130 401-476 (539)
359 3e9l_A PRE-mRNA-processing-spl 25.1 55 0.0019 19.9 2.3 32 106-137 26-57 (257)
360 3sbt_A PRE-mRNA-splicing facto 24.6 55 0.0019 20.0 2.2 32 106-137 25-56 (260)
361 3uc1_A DNA gyrase subunit A; D 24.1 1.5E+02 0.005 19.0 14.7 116 4-133 108-226 (327)
362 4a9v_A PHOX; hydrolase, beta-p 22.5 2.1E+02 0.0073 20.3 9.2 60 52-122 476-548 (592)
363 2hrv_A 2A cysteine proteinase; 20.8 91 0.0031 17.3 2.5 17 119-135 119-135 (142)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=2.5e-25 Score=139.03 Aligned_cols=109 Identities=21% Similarity=0.250 Sum_probs=97.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... ..+..+.. |...|.+++|+|++.++++|+.|++|++||+
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQ---------------VEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCC---------------ceeEEeec-cCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 6899999999999999999997433 45677777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. ....+.+|...|++++|+|+ +.+|++++.|++|++||++++
T Consensus 85 ~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 85 NTGE----------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGT
T ss_pred CCCc----------EEEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCC
Confidence 8876 44455689999999999999 999999999999999998765
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.6e-25 Score=140.01 Aligned_cols=110 Identities=25% Similarity=0.352 Sum_probs=97.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATG---------------KLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC---------------cEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 6899999999999999999997433 55778888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ....+.+|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 236 ~~~~----------~~~~~~~h~~~v~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 236 QHAN----------LAGTLSGHASWVLNVAFCPD-DTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTE
T ss_pred CCcc----------eeEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCE
Confidence 8765 44455689999999999999 9999999999999999998754
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=1.5e-24 Score=137.64 Aligned_cols=136 Identities=57% Similarity=1.145 Sum_probs=105.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++|++|+.|++|++|+...+..............++++..+.+.|...|.+++|+|++..+++++.|+.|++|+.
T Consensus 202 ~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 202 FDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEe
Confidence 68999999999999999999986554444333334456678888888768889999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...... ..+..........+|...|++++|+|+...+|++++.|+.|++|+++.++
T Consensus 282 ~~~~~~-~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 282 DPNSDP-QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp CTTSCT-TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred CCCCCc-ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 765421 22222223334457899999999999834699999999999999998764
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=4.3e-25 Score=137.93 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=96.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTG---------------EKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred EeCCCCEEEEECCCCEEEEEECCCC---------------cEEEEEeC-CCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 5789999999999999999997543 44677888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... .....+.+|...|.+++|+|.++..|++++.|+.|++||+++..
T Consensus 127 ~~~~---------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 127 ENNW---------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp GGTT---------EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCc---------chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 8654 23344568999999999999548899999999999999997653
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=7.4e-25 Score=137.93 Aligned_cols=107 Identities=20% Similarity=0.359 Sum_probs=95.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHA---------------NLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCc---------------ceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 6899999999999999999997543 34677788 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.... ....+..|...|++++|+|+ +..|++++.|+.|++||+.
T Consensus 278 ~~~~----------~~~~~~~h~~~v~~v~~s~~-g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 278 GTRT----------CVHTFFDHQDQVWGVKYNGN-GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTCCEEEEECC
T ss_pred CCCE----------EEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEeCC
Confidence 8765 44455689999999999999 9999999999999999974
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=2e-24 Score=137.14 Aligned_cols=114 Identities=20% Similarity=0.336 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+ +.|++|+.||+|+|||+...... ........+ |...|++++|+|++.+|++|+.|++|++||+
T Consensus 90 ~s~d-~~l~~~s~dg~v~lWd~~~~~~~-----------~~~~~~~~~-H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 90 WVGE-RGILVASDSGAVELWELDENETL-----------IVSKFCKYE-HDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EETT-TEEEEEETTSEEEEEEECTTSSC-----------EEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EeCC-CeEEEEECCCEEEEEeccCCCce-----------eEeeccccC-CCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 4666 46889999999999998654321 122234456 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+.+|...|++++|+|+...+|++++.|+.|++||+++++
T Consensus 157 ~~~~----------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 157 AQQV----------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCc----------EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 8765 4555668999999999999845688999999999999998765
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=7.5e-25 Score=141.83 Aligned_cols=110 Identities=25% Similarity=0.407 Sum_probs=97.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++||+.... ....+.+ |...|.+++|+|++.++++|+.|++|++||+
T Consensus 116 ~~p~~~~l~s~s~Dg~i~vwd~~~~~---------------~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 116 FHPVFSVMVSASEDATIKVWDYETGD---------------FERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTCC---------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCc---------------EEEEEec-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 68999999999999999999975543 2567788 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ......+|...|.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 180 ~~~~----------~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 180 QGFE----------CIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp TSSC----------EEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCC
T ss_pred CCCc----------eeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 8765 44555689999999999999 9999999999999999998764
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.8e-24 Score=137.42 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=90.2
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++||++.. +++..+.+ |...|++++|+|++. +|++++.|++|++|
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~---------------~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKST---------------SCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC-----------------CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred ecCCCCcceEEeccCCcEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 356 5678999999999999997543 34677888 899999999999985 89999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..++ ... ..+|...|++++|+|++..+|++++.|++|++|++.++.
T Consensus 286 d~~~~~----------~~~-~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 286 DSSLSE----------LFR-SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CTTCCE----------EEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred ECCCCc----------EEE-EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 998654 222 358999999999999844578899999999999998754
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=3.4e-24 Score=135.99 Aligned_cols=113 Identities=33% Similarity=0.664 Sum_probs=93.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe-cCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|++||+|+.|++|+||++... .+.+...+ .+ |...|.+++|+|++.+|++++.|+++++|+
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~-------------~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGD-------------SWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETT-------------EEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCC-------------cceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 6899999999999999999997432 11222233 45 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.... . .....+.+|...|.+++|+|+ +++|++++.|+.|++||++.+
T Consensus 90 ~~~~~-------~-~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 90 KNQDD-------F-ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp ECCC--------E-EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTT
T ss_pred ccCCC-------e-EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCC
Confidence 87643 0 123344589999999999999 999999999999999999764
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=7.6e-24 Score=134.23 Aligned_cols=112 Identities=22% Similarity=0.345 Sum_probs=95.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|+||+.|++|++||+...... .....+...+.+ |...|.+++|+|++.++++++.|++|++||++.+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~--------~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~ 108 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQN--------GYFGIPHKALTG-HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG 108 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCS--------SBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcc--------cccccccchhcc-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 8899999999999999998653221 122355677888 8999999999999999999999999999999877
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
. ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.
T Consensus 109 ~----------~~~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 109 T----------TYKRFVGHQSEVYSVAFSPD-NRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp C----------EEEEEECCCSCEEEEEECSS-TTEEEEEETTSCEEEEESSS
T ss_pred c----------EEEEEcCCCCcEEEEEECCC-CCEEEEEcCCCEEEEEeccC
Confidence 6 44445689999999999999 99999999999999999863
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.9e-24 Score=135.61 Aligned_cols=120 Identities=25% Similarity=0.433 Sum_probs=91.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++|++..... .....+++..+.+ |...|.+++|+|++.+|++++.|++|++||+
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~--------~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESAD--------RTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC---------------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcC--------ccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 689999999999999999999753211 0122356777888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... . .....+..|...|.+++|+|+ +.+|++++.|++|++||.+++
T Consensus 137 ~~~~~~-----~-~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 137 DESGEE-----Y-ECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CTTCCC-----C-EEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEEEETT
T ss_pred cCCCCC-----e-EEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECCCC
Confidence 533200 0 122334578999999999999 999999999999999998653
No 12
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=1.5e-24 Score=138.69 Aligned_cols=114 Identities=15% Similarity=0.122 Sum_probs=94.1
Q ss_pred CccCCCeEEEeeCCC----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|+|+++++++++.|+ .+++|++..... .......+.+ |...|++++|+|++.+|++|+.|++|+
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNT-----------SVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEE-----------EEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EcCCCCEEEEEecCCcceeEEeeccccccee-----------cceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 689999999999888 688888743311 1122445666 788999999999999999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|||+..++ .......+|...|++++|+|+ +++|++++.|++|+|||+...
T Consensus 295 iwd~~~~~---------~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLS---------MSKIFKQAHSFAITEVTISPD-STYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTE---------EEEEETTSSSSCEEEEEECTT-SCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCc---------EEEEecCcccCCEEEEEECCC-CCEEEEEeCCCeEEEEEcCCC
Confidence 99998765 233445689999999999999 999999999999999998643
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.92 E-value=2.5e-24 Score=135.28 Aligned_cols=114 Identities=22% Similarity=0.268 Sum_probs=96.7
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++ ++|++|+.|++|++|++..... ....++..+.+ |...|.+++|+|++.++++++.|++|++||
T Consensus 25 ~~~~~~~~l~s~s~D~~v~~W~~~~~~~----------~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 25 TSAGQPNLLLSASRDKTLISWKLTGDDQ----------KFGVPVRSFKG-HSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEEEEETT----------EEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCccEEEEecCCccEEEecCCCCCc----------cccccceEEeC-CcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 46654 8999999999999999854321 12355778888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..+. ....+.+|...|.+++|+|+ +.++++++.|++|++||++..
T Consensus 94 ~~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 94 VATGE----------TYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETTSC
T ss_pred CCCCC----------eeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCC
Confidence 98765 44445689999999999999 999999999999999998753
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=1.6e-23 Score=130.93 Aligned_cols=110 Identities=29% Similarity=0.553 Sum_probs=96.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++|+.... +....+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDG---------------KFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCc---------------ccchhhcc-CCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 6899999999999999999997432 33566777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.++.|+|+ +.++++++.|+.|++||+++++
T Consensus 95 ~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 95 SSGK----------CLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCE
Confidence 8766 34445578999999999999 9999999999999999998764
No 15
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.92 E-value=1.2e-23 Score=131.05 Aligned_cols=114 Identities=32% Similarity=0.502 Sum_probs=92.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++|+||++.... .+++..+.+ |...|.+++|++. +.+|++++.|++|++|
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~-------------~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGET-------------HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSC-------------BCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCC-------------cEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 68999999999999999999975321 133677888 8999999999864 7899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+.. ........|...|.+++|+|+. +.+|++++.|+.|++||++.+
T Consensus 83 d~~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 83 KEENGRW--------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EBSSSCB--------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EcCCCce--------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 9986530 0122234688999999999963 679999999999999999765
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-23 Score=131.94 Aligned_cols=115 Identities=27% Similarity=0.476 Sum_probs=94.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+|+.|++|++||+.... ...+++..+.+ |...|.+++|+|++.+|++++.|++|++|+.
T Consensus 115 ~sp~g~~las~s~D~~v~iwd~~~~~-----------~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 115 WSNDGYYLATCSRDKSVWIWETDESG-----------EEYECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ECTTSCEEEEEETTSCEEEEECCTTC-----------CCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeccCCC-----------CCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 68999999999999999999974321 22356777888 8999999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... . .....+.+|...|++++|+|+. +..|++++.|++|++||++.
T Consensus 183 ~~~~-------~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 183 YDDD-------W-ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp ETTE-------E-EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCC-------e-eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 7542 0 1233456899999999999973 35799999999999999864
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=2.7e-23 Score=132.36 Aligned_cols=109 Identities=19% Similarity=0.367 Sum_probs=95.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|+++.|++++.|++|++||+... +++..+.+ |...|.++.++|. +.++++|+.|+.|++|
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESG---------------QLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCC---------------eEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 5788999999999999999997543 45777888 8999999999884 5799999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.+. ....+..|...|++++|+|+ +..|++++.|++|++||++.+
T Consensus 226 d~~~~~----------~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 226 DMRSGQ----------CVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp ETTTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT
T ss_pred ECCCCc----------EEEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCC
Confidence 999876 44455689999999999999 999999999999999999865
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=3.7e-23 Score=129.30 Aligned_cols=110 Identities=26% Similarity=0.449 Sum_probs=96.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.++.|+|++.++++++.|+.|++||+
T Consensus 73 ~~~~~~~l~s~~~d~~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 73 WSSDSNLLVSASDDKTLKIWDVSSG---------------KCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEECCCCEEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 6899999999999999999997543 34677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. .......|...|.+++|+|+ +.++++++.|+.|++||+++++
T Consensus 137 ~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 137 KTGK----------CLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp TTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCE----------EEEEecCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 8765 34445578899999999999 9999999999999999998754
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.92 E-value=1.8e-23 Score=135.41 Aligned_cols=110 Identities=27% Similarity=0.476 Sum_probs=97.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++||+... +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 158 ~~~~~~~l~sgs~D~~i~iwd~~~~---------------~~~~~~~~-h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 158 FDHSGKLLASCSADMTIKLWDFQGF---------------ECIRTMHG-HDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp ECTTSSEEEEEETTSCCCEEETTSS---------------CEEECCCC-CSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCC---------------ceeEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 5789999999999999999997432 45777888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+.+|...|.++.++|+ +.++++++.|+.|++||+++++
T Consensus 222 ~~~~----------~~~~~~~h~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 222 QTGY----------CVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCc----------EEEEEeCCCccEEEEEECCC-CCEEEEEcCCCeEEEEECCCCc
Confidence 8776 44445689999999999999 9999999999999999998754
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=1.7e-23 Score=133.42 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=90.3
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+ +.+|++|+.|+.|++||++... ++..+.+ |...|.+++|+|++. +|++++.|++|+||
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~---------------~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPD---------------SAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGG---------------GCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred hhhcccceEEEeecccceeEEECCCCc---------------EeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 5676 5689999999999999976542 2567777 889999999999885 89999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.++ .... .+|...|++++|+|.++.+|++++.|++|++|++...
T Consensus 298 d~~~~~----------~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 298 DADFSE----------VFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CTTSCE----------EEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred ECCCCc----------EeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 998764 3333 3799999999999943899999999999999998653
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=1.4e-23 Score=131.79 Aligned_cols=114 Identities=32% Similarity=0.535 Sum_probs=93.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++|++||+.... ..++..+.+ |...|.+++|++ ++.+|++++.|++|++|
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~-------------~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGG-------------QILIADLRG-HEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTE-------------EEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCC-------------cEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 68999999999999999999985321 134677888 899999999976 47899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.+.. .......+|...|++++|+|+. +.+|++++.|+.|++||++.+
T Consensus 87 d~~~~~~--------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 87 REENGTW--------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CCSSSCC--------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ECCCCcc--------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 9986430 0222345789999999999973 578999999999999998764
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=3.9e-23 Score=139.58 Aligned_cols=110 Identities=24% Similarity=0.372 Sum_probs=94.4
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++ .|++|+.|++|++||.. ..+++..+.+ |...|.+++|+|++.++++++.|++|++||
T Consensus 155 f~p~~~~~l~s~s~D~~v~lwd~~---------------~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 155 FKPSRPFRIISGSDDNTVAIFEGP---------------PFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETT---------------TBEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCeEEEEEeCCCeEEEEECC---------------CCeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 678886 59999999999999952 2356778888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeee-------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEH-------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..+. ....+ .+|...|.+++|+|+ +.+|++++.|++|++||+++++
T Consensus 219 ~~~g~----------~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 219 GVDGT----------KTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp TTTCC----------EEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE
T ss_pred CCCCc----------EeeeeccccccccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCc
Confidence 88765 22222 168999999999999 9999999999999999998653
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.91 E-value=4.6e-23 Score=130.55 Aligned_cols=107 Identities=20% Similarity=0.406 Sum_probs=92.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++ .+++++.|+.|++||+... +++..+.+ |...|.+++|+|++.++++++.|+.|++||++
T Consensus 152 ~~~~-~l~s~s~d~~i~~wd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~ 214 (340)
T 1got_B 152 LDDN-QIVTSSGDTTCALWDIETG---------------QQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214 (340)
T ss_dssp EETT-EEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCC-cEEEEECCCcEEEEECCCC---------------cEEEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 3444 5899999999999997443 55778888 89999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. ....+..|...|++++|+|+ +.+|++++.|+.|++||++.+
T Consensus 215 ~~~----------~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 215 EGM----------CRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TCS----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT
T ss_pred CCe----------eEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCCC
Confidence 765 44455689999999999999 999999999999999999865
No 24
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=1.7e-24 Score=139.54 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=93.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--------CCCeEEEeeCCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--------LTDLIATACGDD 73 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--------~~~~~~s~~~d~ 73 (138)
++++++||+++.|++|++||...... ....++..+.+ |.+.|.+++|+| ++++|++++.|+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~----------~~~~~~~~~~g-H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETI----------ITQHVLGGKSG-HHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEE----------EEEEEECTTTS-CSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcc----------ceeeeecccCC-CCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 45678899999999999999865421 11233455677 899999999998 778999999999
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|+|||+.... .......|...+.+++|+|++..+|++++.|++|++||+++++
T Consensus 167 tv~~Wd~~~~~----------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 167 TLIIWRLTDEG----------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEETTE----------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred eEEEEECCCCc----------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 99999998654 3333347888999999999844689999999999999998764
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.91 E-value=4.1e-23 Score=130.76 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=89.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|++|++||++.. +.+..+.. .+...|.+++|+|++.++++|+.|+.|++||
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~---------------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEE
Confidence 6899999999999999999997543 22333332 1345799999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+.... ....+.+|...|++++|+|+ +.+|++++.|+.|++||
T Consensus 299 ~~~~~----------~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 299 ALKAD----------RAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTTCC----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred cccCc----------EeeEeecCCCcEEEEEEcCC-CCEEEEEcCCccEEecC
Confidence 98765 34445689999999999999 99999999999999996
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=5.6e-23 Score=131.88 Aligned_cols=115 Identities=14% Similarity=0.251 Sum_probs=90.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------CccCeEEEEEecCCCeEEEeeCCCc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~s~~~d~~ 74 (138)
|+|++++|++|+.|++|++||++.. +++..+..+ +...|.+++|+|++.++++|+.|+.
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~---------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTG---------------HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTT---------------EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EecCCCeEEEEcCCCeEEEEECCCC---------------cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 6899999999999999999998643 233333331 2234889999999999999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... ... .......+|...|++++|+|+ +.+|++|+.|+.|++|++...+
T Consensus 322 i~vwd~~~~~-----~~~-~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 322 CYVWDTLLAE-----MVL-NLGTLQNSHEGRISCLGLSSD-GSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEETTTCC-----EEE-EECCSCSSCCCCCCEEEECSS-SSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEECCCCc-----eEE-EEecccCCCCCceEEEEECCC-CCEEEEeeCCCCEEEEecCCCc
Confidence 9999988655 000 011122478999999999999 9999999999999999997653
No 27
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.9e-23 Score=129.06 Aligned_cols=111 Identities=7% Similarity=-0.004 Sum_probs=90.3
Q ss_pred Ccc--CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQ--TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~--~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++||++.. +++.....++...+.+++|+|++.++++|+.|+.|++|
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~---------------~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDD---------------SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSS---------------CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCC---------------cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 578 8999999999999999997543 22444444356689999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++.+. .....+.. |...|++++|+|+ +.+|++++ |+.|++||++.++
T Consensus 198 d~~~~~---------~~~~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 198 NLSSPD---------QASSRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp ESSCTT---------SCCEECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEETTSST
T ss_pred ECCCCC---------CCccEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCC
Confidence 999776 12123344 8999999999999 99999999 5599999998764
No 28
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=1e-22 Score=131.53 Aligned_cols=110 Identities=14% Similarity=0.129 Sum_probs=96.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... ++...+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFN---------------LQREIDQA-HVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSC---------------EEEEETTS-SSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EecCCCEEEEEECCCCEEEEeCCCc---------------ceeeeccc-ccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 4789999999999999999996432 44566667 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+..|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 169 ~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 169 KDGS----------NPRTLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTCC----------CCEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTE
T ss_pred CCCc----------CceEEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCCc
Confidence 8765 33444579999999999999 9999999999999999998764
No 29
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=3.9e-22 Score=125.31 Aligned_cols=124 Identities=23% Similarity=0.386 Sum_probs=98.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++||+|+.|+.|++|++.... ...+.+..+.+ |...|.+++|+| ++.++++++.|+.|++|
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDT-----------SNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSS-----------CCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCC-----------Ccceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 68999999999999999999986432 22355677777 899999999999 58899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+.......... .......|...|.+++|+|+. +.++++++.|+.|++||+++++
T Consensus 87 d~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWN-KLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ecCCCcccccccCcc-eeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 998764222111111 223334788999999999974 6789999999999999998764
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.90 E-value=2.1e-22 Score=129.77 Aligned_cols=110 Identities=25% Similarity=0.395 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++|++|+.|+.|++||+... +.+..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENR---------------KIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 194 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC---------------cEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEEC
Confidence 6899999999999999999997432 45677888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. ..... .+...+.+++|+|.++.++++++.|+.|++||+++++
T Consensus 195 ~~~~----------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 195 RTGQ----------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp TTTE----------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC
T ss_pred CCCe----------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 8764 22222 3567899999999439999999999999999988654
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=1e-22 Score=136.12 Aligned_cols=103 Identities=30% Similarity=0.523 Sum_probs=90.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+++.|+.|++|+... +++..+.+ |...|++++|+|++++|++++.|+.|++||.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~~----------------~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRNG----------------QLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTS----------------CEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCEEEEEeCCCEEEEEcCCC----------------CEEEEEeC-CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 689999999999999999999421 34677888 8999999999999999999999999999996
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
. ++ ....+.+|...|++++|+|+ +++|++++.|+.|++||
T Consensus 538 ~-~~----------~~~~~~~h~~~v~~~~fs~d-g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 N-GQ----------LLQTLTGHSSSVWGVAFSPD-GQTIASASSDKTVKLWN 577 (577)
T ss_dssp T-SC----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred C-CC----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEeC
Confidence 4 33 33445689999999999999 99999999999999997
No 32
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=1.5e-22 Score=130.45 Aligned_cols=117 Identities=19% Similarity=0.331 Sum_probs=96.6
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++|++....... ...+++..+.+ |...|.+++|+|++ .++++++.|+.|++|
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~--------~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVL--------PLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSS--------CBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCcc--------ccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 578 89999999999999999986543211 11123566777 89999999999998 599999999999999
Q ss_pred eccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+. ..... ..|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 160 d~~~~~----------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 160 DVGTGA----------AVLTLGPDVHPDTIYSVDWSRD-GALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp ETTTTE----------EEEEECTTTCCSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTE
T ss_pred ECCCCC----------ccEEEecCCCCCceEEEEECCC-CCEEEEEecCCcEEEEeCCCCc
Confidence 998765 33333 578899999999998 9999999999999999998764
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.90 E-value=3e-22 Score=125.89 Aligned_cols=109 Identities=23% Similarity=0.438 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC------CeEEEeeCCCc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT------DLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~------~~~~s~~~d~~ 74 (138)
|+|++++|++|+.|++|++||++. +++..+.+ |...|.++++.|.. ..+++++.|+.
T Consensus 115 ~~~~~~~l~s~s~D~~i~vwd~~~----------------~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 115 IDKKASMIISGSRDKTIKVWTIKG----------------QCLATLLG-HNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTS----------------CEEEEECC-CSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC----------------CeEEEEec-cCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 578999999999999999999742 34667777 89999999999854 48999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... ....+.+|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 178 i~~wd~~~~~----------~~~~~~~h~~~v~~~~~sp~-g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 178 VKAWNLNQFQ----------IEADFIGHNSNINTLTASPD-GTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEEEETTTTE----------EEEEECCCCSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTE
T ss_pred EEEEECCcch----------hheeecCCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 9999998754 34445689999999999999 9999999999999999998754
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=2.8e-22 Score=134.01 Aligned_cols=107 Identities=30% Similarity=0.531 Sum_probs=93.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+|++||+|+.|++|+|||... +++..+.+ |...|.+++|+|++++|++++.|++|++||.
T Consensus 24 ~spdg~~las~~~d~~v~iWd~~~----------------~~~~~l~g-h~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 24 FSPDGQTIASASDDKTVKLWNRNG----------------QLLQTLTG-HSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTS----------------CEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC----------------CEEEEEeC-CCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 689999999999999999999421 34678888 8999999999999999999999999999996
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.. . ......+|...|.+++|+|+ +.+|++++.|+.+++|+....
T Consensus 87 ~~-~----------~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d~~~~~~~~~~~ 130 (577)
T 2ymu_A 87 NG-Q----------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQ 130 (577)
T ss_dssp TS-C----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCC
T ss_pred CC-C----------EEEEEECCCCCEEEEEECCC-CCEEEEEcCCCceeecccccc
Confidence 43 2 33445689999999999999 999999999999999997543
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.90 E-value=1.3e-22 Score=136.99 Aligned_cols=111 Identities=21% Similarity=0.284 Sum_probs=91.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++||+|+.|+.|++||+... ....+.. .+ |...|.+++|+|+++++++++.|++|++|++
T Consensus 456 ~spdg~~lasgs~D~~v~lwd~~~~-------------~~~~~~~-~~-h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 456 LSNDKQFVAVGGQDSKVHVYKLSGA-------------SVSEVKT-IV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETT-------------EEEEEEE-EE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred EeCCCCEEEEeCCCCeEEEEEccCC-------------ceeeeec-cC-CCCceEEEEECCCCCEEEEEcCCCCEEEEEc
Confidence 5899999999999999999997532 1122333 45 8889999999999999999999999999999
Q ss_pred cC-CCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NP-EAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~-~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.. .. .... ....|...|++++|+|+ +++|++++.|++|++||+..+
T Consensus 521 ~~~~~---------~~~~~~~~~H~~~V~~v~fspd-g~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 521 ANNFE---------LAHTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp GGTTE---------ESCCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCT
T ss_pred CCCCc---------eeeeeeeeecccceeEEEECCC-CCEEEEEECCCcEEEEECCCc
Confidence 86 22 1111 22348999999999999 999999999999999999764
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.90 E-value=2.2e-22 Score=128.09 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=88.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|++|++||++.. +.+..+.. .+...+.+++|+|++.++++++.|+.|++||
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRAD---------------REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 5899999999999999999998543 22333332 1345789999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+..+. ....+.+|...|++++|+|+ +.+|++++.|+.|++|+
T Consensus 313 ~~~~~----------~~~~l~~h~~~v~~l~~spd-g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 313 VLKGS----------RVSILFGHENRVSTLRVSPD-GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTTCS----------EEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred CCCCc----------eEEEEECCCCcEEEEEECCC-CCEEEEEcCCCCEEecC
Confidence 98765 34445689999999999999 99999999999999996
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.90 E-value=2.7e-22 Score=129.25 Aligned_cols=122 Identities=18% Similarity=0.274 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++......... ......+...+.+ |...|.+++|++++.++++++.|+.|++||+
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~---~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK---TPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC------------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCCccccc---CCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 57999999999999999999986543221110 0112345566777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC-----CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-----VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. ....+.+|...|.+++|++. ++++|++++.|+.|++|+++..
T Consensus 340 ~~~~----------~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 340 KSGN----------PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCe----------EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 8776 44445689999999999862 2789999999999999998754
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.89 E-value=6.3e-22 Score=135.24 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=94.9
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|+||+.|++|++|++..... ....+...+.+ |...|.+++|+|++.++++|+.|++|++||
T Consensus 390 ~~~~~~~~l~s~s~D~~i~~W~~~~~~~----------~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 390 TPIDNADIIVSASRDKSIILWKLTKDDK----------AYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCTTCCSEEEEEETTSEEEEEECCCSTT----------CSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEEccCCCc----------ccccccceecC-CCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 4565 47999999999999999865322 11244566777 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+..+. ....+.+|...|++++|+|+ +.+|++++.|++|++||...
T Consensus 459 ~~~~~----------~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 459 LAAGV----------STRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTS
T ss_pred CCCCc----------ceeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCC
Confidence 98765 34445689999999999999 99999999999999999754
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.89 E-value=2.7e-22 Score=130.65 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=89.1
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~ 78 (138)
|+| ++++||+|+.||.|+|||+..... .....+.+ |.+.|++|+|+| ++.+|++++.|++|++|
T Consensus 127 ~~P~~~~~lasGs~dg~i~lWd~~~~~~-------------~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 127 WHPTHPSTVAVGSKGGDIMLWNFGIKDK-------------PTFIKGIG-AGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp ECSSCTTCEEEEETTSCEEEECSSCCSC-------------CEEECCCS-SSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred EeCCCCCEEEEEeCCCEEEEEECCCCCc-------------eeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 577 567999999999999999854432 23455667 899999999998 56799999999999999
Q ss_pred eccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++... ..... ..+...+.+++|+|+ +.+|++|+.|+.|++||++...
T Consensus 193 d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 193 DFKGNI----------LRVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp ETTSCE----------EEEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSSCB
T ss_pred eccCCc----------eeEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCcce
Confidence 997543 11111 233456789999999 9999999999999999997654
No 40
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=6.9e-22 Score=125.29 Aligned_cols=111 Identities=19% Similarity=0.328 Sum_probs=93.4
Q ss_pred CccC---CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQT---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~---~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+ |++|++|+.|+.|++|++..... .....+.+ |...|.+++|+|++.++++++.|+.|++
T Consensus 47 ~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------TIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp ECCTTSSSEEEEEEETTSEEEEEEECTTSC-------------EEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCCCceEEEEECCCCcEEEEEcCCCCc-------------eeEEEecc-ccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 5677 69999999999999999864222 23356666 8999999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEE--ccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW--NPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||+.... ... ...|...|++++| +|+ +.+|++++.|+.|++||+++++
T Consensus 113 wd~~~~~----------~~~-~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 113 WDLSSNQ----------AIQ-IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EETTTTE----------EEE-EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSS
T ss_pred EEcCCCC----------cee-eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCc
Confidence 9998764 222 3468899999999 787 8899999999999999998765
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.89 E-value=7.9e-22 Score=126.57 Aligned_cols=109 Identities=20% Similarity=0.277 Sum_probs=89.2
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+++++|++|+.|++|++||++... .++..+.+ |...|.+++|+|++.++++++.|++|++||++.
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~--------------~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITS--------------RAVRTYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTC--------------CCCEEECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCCCEEEEEECCCeEEEEECCCCC--------------cceEEECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 478999999999999999986332 22567777 899999999999999999999999999999987
Q ss_pred CCCCCceeeeeeeeeeec-------ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHR-------AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+. ...... .+...|++++|+|+ +.++++++.|+.|++||+..++
T Consensus 281 ~~----------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 281 GH----------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp TE----------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCC
T ss_pred Cc----------EEEEecccccccccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCc
Confidence 64 111111 12235899999999 9999999999999999987653
No 42
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.9e-22 Score=140.31 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-----CCCccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-----GHHGRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
|+|++++||||+.|++|++||+........ ... ...+. + |...|.+|+|+|++++|++|+.|++|
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~-------~~~--~~~l~~~~~~~-h~~~V~svafspdg~~LAsgs~DgtV 512 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDN-------ASF--EVNLSRTLNKA-KELAVDKISFAAETLELAVSIETGDV 512 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTT-------BCE--EEEHHHHTTCS-SSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCC-------ceE--EeechhhcCCC-CCCceeEEEecCCCCeEEEEecCcEE
Confidence 579999999999999999999866522100 000 01111 5 78899999999999999999999999
Q ss_pred EEEeccCCCCCC--------c----------------------------eeeeeeeeeeecccccceeEEEEccCCCCEE
Q psy14817 76 RIFKENPEAGDS--------D----------------------------MVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 119 (138)
Q Consensus 76 ~i~~~~~~~~~~--------~----------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 119 (138)
++|++....... . ...+. +...+..|...|++++|+|+ + +|
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~h~~~V~svafSpd-G-~l 589 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFM-PSTAVHANKGKTSAINNSNI-G-FV 589 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEE-EEEEECCCSCSEEEEEECBT-S-EE
T ss_pred EEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccc-eeEEEEcCCCcEEEEEecCC-c-EE
Confidence 999998652100 0 00011 23344579999999999999 8 99
Q ss_pred EEEeCCCcEEEEEcCCC
Q psy14817 120 ASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 120 ~~~~~d~~v~~wd~~~~ 136 (138)
++|+.|++|++||++++
T Consensus 590 Asgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 590 GIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp EEEETTSEEEEEETTTT
T ss_pred EEEeCCCcEEEEECCCC
Confidence 99999999999998765
No 43
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.1e-21 Score=124.89 Aligned_cols=119 Identities=20% Similarity=0.226 Sum_probs=87.3
Q ss_pred CeEEE--eeCCCcEEEeeccCCCCCCCccCCCCCCceEE-eEEecCCCccCeEEEEEecCCCeEEEeeCCCc-EEEEecc
Q psy14817 6 SRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC-VCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKEN 81 (138)
Q Consensus 6 ~~l~t--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~-i~i~~~~ 81 (138)
++++. |+.||.|++||+...................+ +..+.+ |...|.+++|+|++.++++++.|++ |++||++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 34554 68999999999865431111000000111223 667788 8999999999999999999999998 9999999
Q ss_pred CCCCCCceeeeeeeeeeec-c-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHR-A-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. ....+. + |...|++++|+|+ +.+|++++.|++|++||++.+
T Consensus 227 ~~~----------~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 227 DGV----------LVREFRRGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TCC----------EEEEEECTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCC
T ss_pred CCc----------EEEEEEcCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCC
Confidence 776 333333 4 8899999999999 999999999999999999764
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.89 E-value=2e-21 Score=121.02 Aligned_cols=112 Identities=22% Similarity=0.383 Sum_probs=88.8
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC---CeEEEeeCCCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~---~~~~s~~~d~~i~i~~~~ 81 (138)
+++|++|+.|++|++||++... ..+.....+.+ |...|.+++|+|++ .++++++.|++|++|+++
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 6799999999999999986432 22345667888 89999999999985 699999999999999997
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..... ... .......|...|++++|+|+ +++|++++.|+.|++|+..
T Consensus 238 ~~~~~---~~~--~~~~~~~~~~~v~~~~~s~~-g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 238 NEQGP---WKK--TLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp STTSC---CEE--EESSSSCCSSCEEEEEECSS-SCCEEEEETTSCEEEEEEC
T ss_pred CCCCc---cce--eeeecccCCCcEEEEEECCC-CCEEEEEcCCCcEEEEEEC
Confidence 64311 000 01111356789999999999 9999999999999999976
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=9.8e-22 Score=125.30 Aligned_cols=113 Identities=18% Similarity=0.333 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|++++. ++++++.|+.|++||
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~---------------~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd 210 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQK---------------AVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWD 210 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEE
Confidence 6899999999999999999996433 56778888 899999999999986 889999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.+.. ........+...+.+++|+|+.+.+|++++.|+.|++||+++++
T Consensus 211 ~~~~~~--------~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 211 TRKPKP--------ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp TTSSSC--------BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred CCCCce--------eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 987650 01112235667899999999856789999999999999998764
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=9.2e-22 Score=124.72 Aligned_cols=105 Identities=20% Similarity=0.431 Sum_probs=90.8
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++|++|+.|+.|++||+... +.+..+.+ |...|.+++|+| ++.++++++.|+.|++||++.+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITM---------------QCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTC---------------CEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CCEEEEecCCCEEEEEEchhc---------------eEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 679999999999999997543 34667777 899999999999 8889999999999999999876
Q ss_pred CCCCceeeeeeeeeee---cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEH---RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. ..... ..|...|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 149 ~----------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 149 T----------LVAIFGGVEGHRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp E----------EEEEECSTTSCSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSH
T ss_pred e----------EEEEecccccccCceeEEEECCC-CCEEEEecCCCCEEEEECCCC
Confidence 4 22222 478899999999998 999999999999999999864
No 47
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=1e-21 Score=123.41 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=44.8
Q ss_pred eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 65 ~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
++++++.|++|+|||+..++ ....+.+|...+. .++|+|+ +++|++|+.|++|++||+.
T Consensus 297 ~lASgS~DgTIkIWDl~tGk----------~l~tL~gH~~~vvs~vafSPD-G~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQ----------CTALLPPVSDQHWSFVKWSGT-DSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEEETTSCEEEEETTTCS----------EEEEECCC--CCCCEEEECSS-SSEEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCc----------EEEEecCCCCCeEEEEEECCC-CCEEEEEECCCcEEEecCC
Confidence 46677777777788777765 4445556776555 5899999 9999999999999999963
No 48
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.88 E-value=2.8e-21 Score=121.41 Aligned_cols=134 Identities=31% Similarity=0.559 Sum_probs=98.4
Q ss_pred CccC--CCeEEEeeCCCcEEEeeccCCCCCCCccC-----------------------------C---------------
Q psy14817 1 MIQT--GSRLATCSDDATVKIWKEYKPGNSAGIPT-----------------------------P--------------- 34 (138)
Q Consensus 1 ~s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~-----------------------------~--------------- 34 (138)
|+|+ +++|++++.|+.|++||++.......... .
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 197 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQ 197 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEE
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEE
Confidence 5677 99999999999999999876543221100 0
Q ss_pred -CCCCceEEeEEecCCCccCeEEEEEecCC----CeEEEeeCCCcEEEEeccCCCCCC----------------------
Q psy14817 35 -DNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACGDDAIRIFKENPEAGDS---------------------- 87 (138)
Q Consensus 35 -~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----~~~~s~~~d~~i~i~~~~~~~~~~---------------------- 87 (138)
.......++..+.+ |...|.+++|+|++ .++++++.|+.|++||++......
T Consensus 198 ~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (351)
T 3f3f_A 198 RGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDA 276 (351)
T ss_dssp ECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------
T ss_pred ccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccc
Confidence 00112234566666 88999999999998 799999999999999998642100
Q ss_pred ---------------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 88 ---------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 88 ---------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..... .......+|...|++++|+|+ +++|++++.|+.|++|++..++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 277 QGRSDSNTEEKAELQSNLQV-ELLSEHDDHNGEVWSVSWNLT-GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --------------CCSEEE-EEEEEECTTSSCEEEEEECSS-SCCEEEEETTSCEEEEEECTTS
T ss_pred ccccccccceeeeecccccc-cEEEEEecccccEEEEEEcCC-CCEEEEecCCCcEEEEecCcCc
Confidence 00011 123344578899999999999 9999999999999999998764
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=8.5e-22 Score=125.79 Aligned_cols=114 Identities=19% Similarity=0.326 Sum_probs=87.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.+...+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 63 ~s~~~~~l~s~s~d~~v~vwd~~~~~~------------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 63 WAPKSNRIVTCSQDRNAYVYEKRPDGT------------WKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp ECTTTCCEEEEETTSSEEEC------C------------CCCEEECCC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred EeCCCCEEEEEeCCCeEEEEEcCCCCc------------eeeeeEecc-cCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 689999999999999999999865431 123556666 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.... .. ....... |...|++++|+|+ +.+|++++.|+.|++||++.
T Consensus 130 ~~~~~------~~-~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 130 EQEND------WW-VSKHLKRPLRSTILSLDWHPN-NVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp -----------CC-CCEEECSSCCSCEEEEEECTT-SSEEEEEESSSCEEEEEECC
T ss_pred CCccc------ce-eeeEeecccCCCeEEEEEcCC-CCEEEEEeCCCEEEEEEEEe
Confidence 86540 00 1222234 8899999999999 99999999999999999863
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=4.3e-22 Score=129.69 Aligned_cols=112 Identities=14% Similarity=0.223 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.||.|++||++.. .+..+.+ |...|.+++|+|++. ++++++.|+.|++||
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~----------------~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGK----------------ELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSC----------------BCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcc----------------eeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEe
Confidence 5789999999999999999997432 2455667 899999999999987 788999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++...... ......+|...|++++|+|+ +.+|++++.|+.|++||++++.
T Consensus 280 ~~~~~~~~-------~~~~~~~h~~~v~~~~~spd-g~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 280 LRQVRGKA-------SFLYSLPHRHPVNAACFSPD-GARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TTTCCSSS-------CCSBCCBCSSCEEECCBCTT-SSEEEEEESSSCEEEEESSSSS
T ss_pred cccccccc-------eEEEeeeccccccceeECCC-CCeeEEEcCCCEEEEEECCCCc
Confidence 98654110 11122468899999999999 9999999999999999998754
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.88 E-value=3.9e-21 Score=123.08 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|+.|++||++. +++..+.. |...|.+++|+|++. ++++++.|+.|++||
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~~~----------------~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGLDG----------------HEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEETTS----------------CEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECCC----------------CEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 578999999999999999999731 34667777 899999999999999 999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++....... ..... .|...|.+++|+| + +.+|++++.|+.|++||+++++
T Consensus 234 ~~~~~~~~~------~~~~~-~~~~~v~~~~~s~~~-~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 234 LRNIKDKNS------YIAEM-PHEKPVNAAYFNPTD-STKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp GGGCCSTTC------EEEEE-ECSSCEEEEEECTTT-SCEEEEEESSSEEEEEETTBTT
T ss_pred CCCCCcccc------eEEEe-cCCCceEEEEEcCCC-CCEEEEEcCCCcEEEEECCCCc
Confidence 997431100 22222 6889999999999 8 9999999999999999998754
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=1.3e-21 Score=122.82 Aligned_cols=110 Identities=25% Similarity=0.418 Sum_probs=88.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC----CeEEEeeCCCcEEEEec
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACGDDAIRIFKE 80 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----~~~~s~~~d~~i~i~~~ 80 (138)
+++|++|+.|+.|++||++.. ..++++..+.+ |...|.+++|+|++ .+|++++.|++|++|++
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~------------~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEED------------GQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTT------------SCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cceEEEecCCCeEEEEEeCCC------------Cccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 579999999999999997432 12355677888 89999999999986 68999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
....... ........|...|++++|+|+ +.+|++++.|+.|++|+..
T Consensus 246 ~~~~~~~------~~~~~~~~~~~~v~~v~~sp~-g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNT------WSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCC------CBCCEEEECSSCEEEEEECTT-TCCEEEEESSSCEEEEEEC
T ss_pred cCccccc------hhhhhhhcCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEEC
Confidence 7532000 011122357889999999999 9999999999999999975
No 53
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.88 E-value=4.5e-21 Score=121.53 Aligned_cols=109 Identities=22% Similarity=0.407 Sum_probs=90.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++.++++|+.|++|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRTG---------------TTYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTSS---------------CEEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 5789999999999999999997543 34677788 8999999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCC----------CEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP----------GMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~l~~~~~d~~v~~wd~~ 134 (138)
.... .........|...|.+++|+|+ . .++++++.|+.|++||.+
T Consensus 148 ~~~~--------~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 148 LGEC--------KFSSAEKENHSDWVSCVRYSPI-MKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp SSCE--------EEECCTTTSCSSCEEEEEECCC-CCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred cCCc--------eeeeecccCCCceeeeeeeccc-cccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 7321 0011112367889999999997 5 789999999999999954
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=2.3e-21 Score=122.02 Aligned_cols=117 Identities=21% Similarity=0.339 Sum_probs=85.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++.. +++..+.. ...+.++.|+|++.++ +++.|+.|++||+
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~ 284 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEG---------------KHLYTLDG--GDIINALCFSPNRYWL-CAATGPSIKIWDL 284 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEECSSSSEE-EEEETTEEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccC---------------ceeeeecC--CceEEeeecCCCCcee-eccCCCEEEEEEC
Confidence 5899999999999999999997543 44666654 5689999999977654 5567899999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..... ..............|...|++++|+|+ +++|++|+.|+.|++||+++|+
T Consensus 285 ~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 285 EGKIIV-DELKQEVISTSSKAEPPQCTSLAWSAD-GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTTEEE-EEECCC-------CCCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEC--
T ss_pred CCCeEE-EeccccceeeeccCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeCCCcC
Confidence 865300 000001111223468889999999999 9999999999999999998874
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5e-21 Score=121.84 Aligned_cols=114 Identities=32% Similarity=0.497 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++||+|+.|+.|++|++.. ...+.+..+.+ |...|.+++|+++ +.++++++.|+.|++|
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~-------------~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEG-------------ETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEET-------------TEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCC-------------CcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 689999999999999999999842 23466777888 8999999999977 8899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. .........|...|.+++|+|+. +.++++++.|+.|++||++..
T Consensus 85 d~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 85 KEENGR--------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEETTE--------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EcCCCc--------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 998653 01223334688999999999974 679999999999999999876
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.5e-22 Score=134.63 Aligned_cols=109 Identities=10% Similarity=0.096 Sum_probs=89.0
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc--cCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG--RTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+| ++|||||.|++|+|||++.... ...+.+ |. ..|.+++|+|+++.+++++.|++|++
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~---------------~~~~~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIAT---------------TKTTVS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHH---------------HCEEEE-ECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCc---------------cccccc-ccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 57787 8999999999999999865322 223333 32 35789999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
||++... ....+.+|...|++++|+|+ +.+|++|+.|++|++||+..+
T Consensus 382 wd~~~~~----------~~~~l~gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 382 VPSRAAF----------AVHPLVSRETTITAIGVSRL-HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EETTCTT----------CCEEEEECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSS
T ss_pred EECcccc----------cceeeecCCCceEEEEeCCC-CCeEEEEECCCEEEEEechHh
Confidence 9998765 33334579999999999999 999999999999999997653
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.88 E-value=8.1e-21 Score=119.19 Aligned_cols=112 Identities=15% Similarity=0.356 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... .....+.. |...+.+++|+|++.++++++.|+.|++||+
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~-------------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTP-------------RIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC---------------EEEEEEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCc-------------ceeeeccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 578999999999999999999854321 34556666 7889999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... .......|...+.+++|+|+ +.++++++.|+.|++||+++++
T Consensus 171 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 171 HNQT----------LVRQFQGHTDGASCIDISND-GTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE
T ss_pred CCCc----------eeeeeecccCceEEEEECCC-CCEEEEEecCCcEEEEECCCCc
Confidence 8765 34444578899999999999 9999999999999999998754
No 58
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=8.6e-22 Score=128.48 Aligned_cols=118 Identities=15% Similarity=0.243 Sum_probs=92.3
Q ss_pred CccCCCeEE----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-CCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLA----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~d~~i 75 (138)
|+|+|++|| +|+.|+.|+|||+........ ........+..+.+ |...|.+++|+|+ +.++++++.|++|
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~----~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK----QQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC----SSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCc----CCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECCCeE
Confidence 689999999 899999999999864311000 00011233455666 8899999999998 6799999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
++||++... .......|...|++++|+|+ +.+|++++.|+.|++||++
T Consensus 175 ~iwD~~~~~----------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 175 AVLQVTETV----------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEESSSE----------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCEEEECTT
T ss_pred EEEEcCCCc----------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccC
Confidence 999998653 22223367889999999999 9999999999999999987
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.88 E-value=1.5e-21 Score=126.16 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=89.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+..... +..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~---------------~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSN---------------PRTLIG-HRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCC---------------CEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcC---------------ceEEcC-CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 689999999999999999999865432 556677 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeec------------------------ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHR------------------------AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~------------------------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.+. ...... .+...+.+++|+|+ +.++++++.|+.|++||++++
T Consensus 211 ~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 211 GTGT----------TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp TTTE----------EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTC
T ss_pred CCCc----------eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCC
Confidence 8654 111111 12355666777888 999999999999999999876
Q ss_pred C
Q psy14817 137 N 137 (138)
Q Consensus 137 ~ 137 (138)
+
T Consensus 280 ~ 280 (420)
T 3vl1_A 280 E 280 (420)
T ss_dssp C
T ss_pred c
Confidence 4
No 60
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=4e-21 Score=128.96 Aligned_cols=109 Identities=21% Similarity=0.298 Sum_probs=93.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec----------CCCeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----------~~~~~~s~~ 70 (138)
|+|++++|++++.|+.|++|++... +++..+.+.|...|.+++|+| ++.++++++
T Consensus 496 ~s~~g~~l~~~~~dg~i~iw~~~~~---------------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~ 560 (615)
T 1pgu_A 496 ISPSETYIAAGDVMGKILLYDLQSR---------------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS 560 (615)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE
T ss_pred ECCCCCEEEEcCCCCeEEEeeCCCC---------------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEc
Confidence 6899999999999999999997443 445666554788999999999 999999999
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.|+.|++|++.... .......+|...|++++|+|+ +. |++++.|+.|++|++..
T Consensus 561 ~dg~i~iw~~~~~~---------~~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 561 LDTNIFIYSVKRPM---------KIIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TTSCEEEEESSCTT---------CCEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC-
T ss_pred CCCcEEEEECCCCc---------eechhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeec
Confidence 99999999998762 134445689999999999999 88 99999999999999875
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.8e-21 Score=124.25 Aligned_cols=123 Identities=18% Similarity=0.243 Sum_probs=92.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.+...+...|...|.+++|+|++.++++++.|+.|++||+
T Consensus 108 ~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 108 WSPNEDKFAVGSGARVISVCYFEQEND------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCTTSSCCEEEESSSCEEECCC-----------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ECCCCCEEEEEecCCeEEEEEECCccc------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 689999999999999999999865421 11244555447889999999999999999999999999999
Q ss_pred cCCCCCC--------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDS--------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... ...........+ .|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~-~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS-GNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT-SSCEEEEETTTEEC-CEECSTT
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC-CCEEEEEeCCCcEEEEECCCCC
Confidence 6432110 000111223333 78899999999999 9999999999999999998764
No 62
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.87 E-value=1.3e-20 Score=118.57 Aligned_cols=114 Identities=19% Similarity=0.257 Sum_probs=95.0
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|||||.|++|+|||+..... ....+...+.+ |...|.+++|+|++.++++++.|+.|++|+
T Consensus 46 ~sp~~~~~l~S~s~D~~i~vWd~~~~~~----------~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 46 TTPQFPDMILSASRDKTIIMWKLTRDET----------NYGIPQRALRG-HSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp ECTTCTTEEEEEETTSCEEEEEECCSSS----------CSEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCc----------ccceeeEEEeC-CCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 5786 68999999999999999865432 23356777888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..... .......+...+..+.++++ +.++++++.|+.+++||++..
T Consensus 115 ~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 115 LTTGT----------TTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSC
T ss_pred ecccc----------eeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCC
Confidence 98764 33333456678888899998 999999999999999998653
No 63
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.87 E-value=3.9e-21 Score=131.39 Aligned_cols=113 Identities=20% Similarity=0.306 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.|++|++||...... ........+ |...|.+++|+|++ ..+++++.|++|++|
T Consensus 480 ~s~~~~~l~s~s~D~~i~iwd~~~~~~------------~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 480 FSLDNRQIVSASRDRTIKLWNTLGECK------------YTISEGGEG-HRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEE------------EEECSSTTS-CSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEECCCCcc------------eeeccCCCC-CCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 689999999999999999999643211 011111234 78899999999987 489999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++... ......+|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 547 d~~~~~----------~~~~~~~h~~~v~~v~~spd-g~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 547 NLSNCK----------LRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp ETTTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSBCEEEETTTTE
T ss_pred ECCCCc----------EEEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 998765 44455689999999999999 9999999999999999998764
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.87 E-value=7e-21 Score=131.54 Aligned_cols=109 Identities=22% Similarity=0.254 Sum_probs=96.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+++.||.|++||+... +.+..+.. |...|.+++|+|++.++++++.|+.|++|++
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~~---------------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYETQ---------------VEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCC---------------ceEEEEec-CCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997442 45677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. .......|...|++++|+|+ +.+|++++.|+.|++||++++
T Consensus 85 ~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 85 NTGE----------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEGGGT
T ss_pred CCCc----------EEEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEECCCC
Confidence 8776 44444579999999999999 999999999999999998765
No 65
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.5e-21 Score=126.47 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc----cCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG----RTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|||+|++||+++.||.|++|+.. .++..+. ++. ..+.+++|+|+|+++++|+.||+|+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~-----------------~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDN-----------------KMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETT-----------------EEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCC-----------------ceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 79999999999999999999942 1344444 232 2699999999999999999999999
Q ss_pred EEeccCCCCCCce-eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDM-VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++..+...... ...........+|...|.+++|+|+ + +++++.|+.+++||+..+.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E--EEEEETTCCEEEECCCSSS
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCC-c--EEEEeCCCeEEEEECCCCc
Confidence 9999865300000 0011111112467889999999998 7 8889999999999997654
No 66
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.6e-21 Score=128.74 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=87.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++.+||+++.|++|++||+........... ...++...+.+ |...|.+++|+++ ..|++|+.||+|++||++.+
T Consensus 224 ~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~----~~~~p~~~l~~-h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~ 297 (524)
T 2j04_B 224 LVGCLSFVSQEGTINFLEIIDNATDVHVFK----MCEKPSLTLSL-ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDP 297 (524)
T ss_dssp SSCEEEEEETTSCEEEEECCCCSSSSSEEE----CCCSCSEEECC-TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBC
T ss_pred CCceEEEEecCCeEEEEEcCCCccccccce----eecCceEEEEc-CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCC
Confidence 368999999999999999865432100000 00012346677 8899999999985 48999999999999999865
Q ss_pred CCCCceeeeeeeeeeecccccceeEE--EEccCCC-CEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCV--AWNPVVP-GMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~l~~~~~d~~v~~wd~~~~ 136 (138)
. ........|...|+++ .|+|+ + .+|++++.|++|++||++++
T Consensus 298 ~---------~~~~~~~~H~~~V~sv~~~~s~~-g~~~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 298 E---------VPSFYDQVHDSYILSVSTAYSDF-EDTVVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp S---------SCSEEEECSSSCEEEEEEECCTT-SCCEEEEEETTSEEEEECGGGH
T ss_pred C---------CceEEeecccccEEEEEEEcCCC-CCeEEEEeccCCeEEEEECCCC
Confidence 3 1223345799999999 56776 6 89999999999999999764
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.87 E-value=1.1e-20 Score=120.20 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=95.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++|++... .++.+..+.+ |...|.+++|+|++.++++++.|+.|++|++
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~-------------~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGN-------------KWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETT-------------EEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCC-------------cEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 6899999999999999999997543 1236777887 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... . ........|...|.+++|+|+ +.+|++++.|+.|++||++.+.
T Consensus 82 ~~~~-----~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 82 KGRT-----W---KPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp ETTE-----E---EEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTT
T ss_pred CCCe-----e---eeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCC
Confidence 7653 0 011122468889999999999 9999999999999999987653
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.87 E-value=6.5e-21 Score=122.29 Aligned_cols=111 Identities=15% Similarity=0.158 Sum_probs=90.9
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------------CccCeEEEEEecCCCe
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL 65 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~v~~~~~~~~ 65 (138)
|+|++++|++++.| +.|++||++.. +++..+... |...|.+++|+|++.+
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFG---------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCC---------------cccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 57899999999999 99999997643 234444431 6789999999999999
Q ss_pred EEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec------cc---------------ccceeEEEEccCCC--------
Q psy14817 66 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR------AH---------------NQDVNCVAWNPVVP-------- 116 (138)
Q Consensus 66 ~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~~-------- 116 (138)
+++++.|+.|++||+.... ...... .| ...|++++|+|+ +
T Consensus 306 l~~~~~dg~i~iwd~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~~~~~~ 374 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKE----------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRSGMGAD 374 (397)
T ss_dssp EEEEETTSEEEEEETTTTE----------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSBSTTCT
T ss_pred EEEEeCCCeEEEEEcCCCc----------eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-ccccccccc
Confidence 9999999999999998764 222223 45 889999999998 6
Q ss_pred --CEEEEEeCCCcEEEEEcCCCC
Q psy14817 117 --GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 117 --~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+|++++.|+.|++|++++++
T Consensus 375 ~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 375 LNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSCEEEEEETTTEEEEEEEEC--
T ss_pred ccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 69
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.5e-20 Score=118.19 Aligned_cols=108 Identities=21% Similarity=0.402 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +.+..+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLNG---------------ERLGTLDG-HTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCCc---------------hhhhhhhh-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997443 44677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
..+. ..... .+...+.+++|+|+ +.++++++.+ +.|++||++.+
T Consensus 104 ~~~~----------~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 104 SNGQ----------CVATW-KSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp TTCC----------EEEEE-ECSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCCc----------EEEEe-ecCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCC
Confidence 8766 33333 37789999999999 9999999998 99999998765
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6e-21 Score=133.72 Aligned_cols=126 Identities=12% Similarity=0.136 Sum_probs=94.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC--------C---------c-------------cCCCCCCceEEeEEecCCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA--------G---------I-------------PTPDNDSVWKCVCTLSGHH 50 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~--------~---------~-------------~~~~~~~~~~~~~~~~~~~ 50 (138)
|+|+|++||+|+.|++|+||++....... . . .........+++..+.+ |
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h 574 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-N 574 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-C
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-C
Confidence 68999999999999999999987542100 0 0 00000112467788888 8
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEc-----cCC--CCEEEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWN-----PVV--PGMLASC 122 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~--~~~l~~~ 122 (138)
.+.|++++|+|+| ++++|+.|++|++||++... .........+. +|...|++++|+ |+. +.+|+++
T Consensus 575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~-----~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA-----IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE-----EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe-----EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence 9999999999999 99999999999999986543 11100112232 788999999999 872 3799999
Q ss_pred eCCCcEEEEEc
Q psy14817 123 SDDGDVKLWQI 133 (138)
Q Consensus 123 ~~d~~v~~wd~ 133 (138)
+.|++|++||+
T Consensus 649 s~D~tv~~wd~ 659 (902)
T 2oaj_A 649 TDMGEVITYKI 659 (902)
T ss_dssp ETTSEEEEEEE
T ss_pred ecCCcEEEEEE
Confidence 99999999998
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=2.1e-20 Score=134.08 Aligned_cols=111 Identities=23% Similarity=0.412 Sum_probs=97.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|+++|+|+.|+.|++||.... +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~---------------~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETG---------------EKLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCC---------------CEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997543 44777887 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC-CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.+++|+|+ +..++++++.|+.|++||+++++
T Consensus 687 ~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 687 ATGK----------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred CCCc----------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 9876 44455689999999999995 25689999999999999998764
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-20 Score=116.83 Aligned_cols=107 Identities=17% Similarity=0.242 Sum_probs=90.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++. +++++.|+.|++||++.. +++..+.. |...|.+++|+|++ .+++++.|+.|++||+
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTG---------------DVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred EcCCCe-EEEccCCCeEEEEECCch---------------hhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 467777 999999999999997543 44677777 88999999999999 6889999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.+++|+|+ +. +++++.|+.|++||+++++
T Consensus 254 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 254 ENGS----------LKQVITLPAISIWSVDCMSN-GD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp TTCC----------EEEEEECSSSCEEEEEECTT-SC-EEEEETTSCEEEEESCGGG
T ss_pred CCCc----------eeEEEeccCceEEEEEEccC-CC-EEEEeCCCcEEEEeCCCCc
Confidence 8776 44444578889999999998 76 6679999999999998765
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=8.6e-20 Score=116.06 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.....+...|...|.+++|+|++.++++++.|+.|++||+
T Consensus 104 ~~~~~~~l~~~~~d~~v~i~d~~~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 104 WAPNEKKFAVGSGSRVISICYFEQEND------------WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp ECTTSSEEEEEETTSSEEEEEEETTTT------------EEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ECCCCCEEEEEeCCCEEEEEEecCCCc------------ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 578999999999999999999865421 22333443337899999999999999999999999999997
Q ss_pred cCCCCCCce--------eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDM--------VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
......... ............|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEEEEEETTTEEEEEEGGGTT
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEEEEEeCCCEEEEEECCCCc
Confidence 532100000 0000123334478889999999999 9999999999999999998764
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=3.2e-20 Score=118.11 Aligned_cols=114 Identities=23% Similarity=0.391 Sum_probs=92.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---CCeEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~s~~~d~~i~i~~~ 80 (138)
++++|++++.|+.|++||++... ..+.+...+.+ |...|.+++|+|+ +.++++++.|+.|++||+
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCC-----------cceeeEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 79999999999999999986542 23455677777 8999999999999 789999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
...... .. ........|...|++++|+|+ +.+|++++.|+.|++|+++.
T Consensus 239 ~~~~~~---~~--~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGP---WK--KTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSC---CE--EEESSSSCCSSCEEEEEECSS-SCCEEEEESSSSEEEEEEEE
T ss_pred CCCCcc---ce--eeeeccccCCCcEEEEEEcCC-CCEEEEecCCCcEEEEeCCC
Confidence 875411 01 111122347889999999999 99999999999999999873
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.86 E-value=5.9e-20 Score=118.50 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=92.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.||.|++||+... +.+..+.+ |...|.++.| ++..+++++.|+.|++||+
T Consensus 142 ~s~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 142 WSHDGSFLSVGLGNGLVDIYDVESQ---------------TKLRTMAG-HQARVGCLSW--NRHVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEECCCCeEEEEECcCC---------------eEEEEecC-CCCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence 6899999999999999999997543 34677777 8999999999 4679999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ........|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 204 ~~~~---------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 204 RIAN---------HQIGTLQGHSSEVCGLAWRSD-GLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp TSSS---------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCSS
T ss_pred ccCc---------ceeeEEcCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEccCCCCC
Confidence 8433 133444578999999999998 9999999999999999998754
No 76
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=7.5e-20 Score=114.14 Aligned_cols=124 Identities=18% Similarity=0.265 Sum_probs=89.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCcc-----------------CC--------C-CCC--------ceEEeEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIP-----------------TP--------D-NDS--------VWKCVCTL 46 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~-----------------~~--------~-~~~--------~~~~~~~~ 46 (138)
+++++++|++++.|+.|++||++......... .. + ... .......
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~- 236 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA- 236 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE-
T ss_pred EcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc-
Confidence 46789999999999999999986543221100 00 0 000 0001111
Q ss_pred cCCCccCeEEEEEecCCCeEEEe--eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 47 SGHHGRTIYDISWCHLTDLIATA--CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 47 ~~~~~~~v~~v~~~~~~~~~~s~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
.. +...+..+.|++.+..++++ +.|+.|++||++.+. ....+.+|...|++++|+|+ +.+|++++.
T Consensus 237 ~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~----------~~~~l~gH~~~V~~l~~spd-g~~l~S~s~ 304 (318)
T 4ggc_A 237 VD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----------KVAELKGHTSRVLSLTMSPD-GATVASAAA 304 (318)
T ss_dssp EE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC----------EEEEECCCSSCEEEEEECTT-SSCEEEEET
T ss_pred cc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEec
Confidence 11 45678899999999866654 478999999998876 45556689999999999999 999999999
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
|++|++||+....
T Consensus 305 D~~v~iWd~~~~d 317 (318)
T 4ggc_A 305 DETLRLWRCFELD 317 (318)
T ss_dssp TTEEEEECCSCCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999997654
No 77
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.4e-20 Score=121.89 Aligned_cols=114 Identities=15% Similarity=0.117 Sum_probs=94.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---CCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~s~~~d~~i~i 77 (138)
|+|++++|++|+.|+.|++|++....... .+...+.+ |...|.+++|+|+ +.++++++.|+.|++
T Consensus 157 ~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-----------~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 157 IAEDDTTVIIADKFGDVYSIDINSIPEEK-----------FTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKI 224 (450)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCCCSS-----------CCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEE
T ss_pred EcCCCCEEEEEeCCCcEEEEecCCccccc-----------ccceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEE
Confidence 68999999999999999999986543311 01234555 7889999999999 889999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||+..+. .......+|...|++++|+ + +.+|++++.|+.|++||+++++
T Consensus 225 wd~~~~~---------~~~~~~~~h~~~v~~~~~s-d-~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 225 SHYPQCF---------IVDKWLFGHKHFVSSICCG-K-DYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEESCTT---------CEEEECCCCSSCEEEEEEC-S-TTEEEEEESSSEEEEEETTTCC
T ss_pred EECCCCc---------eeeeeecCCCCceEEEEEC-C-CCEEEEEeCCCeEEEEECCCCc
Confidence 9998765 2223345789999999999 7 9999999999999999998765
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.86 E-value=3.2e-20 Score=119.69 Aligned_cols=110 Identities=25% Similarity=0.400 Sum_probs=92.0
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe--cCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|++ ++|++++.|+.|++||+... +++..+ .. |...|.+++|+|++.++++++.|+.|++
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTG---------------AAVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRV 202 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTT---------------EEEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCC---------------CccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEE
Confidence 57887 69999999999999997543 456677 56 8899999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeee-cccccc-eeEEEEccCCCCEEEEE---eCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH-RAHNQD-VNCVAWNPVVPGMLASC---SDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~d~~v~~wd~~~~~ 137 (138)
||++.+. ..... ..|... +..+.|+|+ +.+++++ +.|+.|++||+++.+
T Consensus 203 wd~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 203 IEPRKGT----------VVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EETTTTE----------EEEEEECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EeCCCCc----------eeeeeccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCcccc
Confidence 9998765 22222 456654 899999999 9999998 789999999998753
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4.4e-20 Score=127.33 Aligned_cols=114 Identities=32% Similarity=0.497 Sum_probs=96.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.||.|++|++.. ...+.+..+.+ |...|.+++|+++ +.++++++.||.|++|
T Consensus 17 ~s~dg~~latg~~dg~I~vwd~~~-------------~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 17 LDYYGKRLATCSSDKTIKIFEVEG-------------ETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp CCSSSCCEEEEETTTEEEEEEEET-------------TEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred ECCCCCeEEEEECCCcEEEEecCC-------------CCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 789999999999999999999752 23466778888 8999999999988 8899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. .........|...|++++|+|+. +..+++++.|+.|++||++.+
T Consensus 83 d~~~~~--------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 83 KEENGR--------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEETTE--------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ECCCCc--------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 998653 01223345788999999999974 689999999999999999876
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.85 E-value=3e-20 Score=118.97 Aligned_cols=109 Identities=16% Similarity=0.180 Sum_probs=87.9
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+| ++++|++++.|+.|++||+... ....+..... |...|.+++|+|++.++++++.|+.|++||
T Consensus 126 ~~~~~~~~l~s~~~d~~i~iwd~~~~-------------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGATTLRDFSGS-------------VIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp EETTEEEEEEEEETTTEEEEEETTSC-------------EEEEEECCCC-SSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred eCCCCCCEEEEEeCCCEEEEEECCCC-------------ceEEEeccCC-CCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 567 6799999999999999998531 1122222222 457899999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~ 135 (138)
+.. . .......|...|.+++|+|+ +. ++++++.|+.|++||+++
T Consensus 192 ~~~-~----------~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 192 LDG-H----------EIFKEKLHKAKVTHAEFNPR-CDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TTS-C----------EEEEEECSSSCEEEEEECSS-CTTEEEEEETTSEEEEEEGGG
T ss_pred CCC-C----------EEEEeccCCCcEEEEEECCC-CCCEEEEEeCCCEEEEEeCCC
Confidence 952 2 23334578999999999999 76 999999999999999987
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=121.18 Aligned_cols=127 Identities=18% Similarity=0.278 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc------------cCeEEEEEecCC--CeE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG------------RTIYDISWCHLT--DLI 66 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~v~~~~~~--~~~ 66 (138)
|+|+|++||+|+.||.|+||++........ .....+++...+.+ |. ..|.+++|+|++ ..+
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~----~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQS----HSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----C----CCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCc----ccccceeEeccccc-ccccccccccccccCceEEEEEcCCCCcceE
Confidence 689999999999999999999865432110 11234556777887 77 889999999998 789
Q ss_pred EEeeCCCcEEEEeccCCCCC---------------------Cceee---------eeeeeeeecccccceeEEEEccCCC
Q psy14817 67 ATACGDDAIRIFKENPEAGD---------------------SDMVS---------FDLVHTEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 67 ~s~~~d~~i~i~~~~~~~~~---------------------~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (138)
++++.|+.|++|++...... ...+. .........+|...|++++|+|+ +
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~ 189 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD-Y 189 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT-S
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC-C
Confidence 99999999999998753200 00000 00011223578999999999999 9
Q ss_pred CEEEEEeCCCcEEEEEcC
Q psy14817 117 GMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~ 134 (138)
.+|+++ .|+.|++||++
T Consensus 190 ~~l~s~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLE 206 (447)
T ss_dssp SEEEEE-CSSEEEEEETT
T ss_pred CEEEEe-CCCeEEEEECC
Confidence 999998 79999999998
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.85 E-value=5.1e-20 Score=120.47 Aligned_cols=108 Identities=18% Similarity=0.388 Sum_probs=92.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++++|++|+.||.|++||+... +++..+.+ |...|.+++|++++ .+++++.|++|++||+.
T Consensus 129 ~~~~~~l~sgs~dg~i~vwd~~~~---------------~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 129 QFEDNYVITGADDKMIRVYDSINK---------------KFLLQLSG-HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECSTT-EEEEEETTSCEEEEETT
T ss_pred EECCCEEEEEcCCCcEEEEECCCC---------------cEEEEEeC-CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC
Confidence 356889999999999999996433 56788888 89999999999887 99999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEcc--CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP--VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.+++|++ + +.++++++.|+.|++||++++.
T Consensus 192 ~~~----------~~~~~~~h~~~v~~l~~~~~~~-~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 192 KGC----------CTHVFEGHNSTVRCLDIVEYKN-IKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEEESSS-CEEEEEEETTSCEEEEECCCCC
T ss_pred CCc----------EEEEECCCCCccEEEEEecCCC-CCEEEEEcCCCcEEEeeCCCCc
Confidence 765 4445567999999999985 4 7899999999999999998754
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.2e-21 Score=123.41 Aligned_cols=111 Identities=9% Similarity=0.051 Sum_probs=90.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++++|++|+.|+.|++||++.. +++..+... |...|.+++|+|++.++++++.|+.|++||+
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTL---------------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDI 243 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTC---------------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCC---------------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 467999999999999999997553 345666553 6789999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeee-cccccceeEEEEccC---CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPV---VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. ..... ..|...|.+++|+|. ++.+|++++.|+.|++||+++++
T Consensus 244 ~~~~----------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 244 RFNV----------LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTTE----------EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CCcc----------EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 8754 22222 267779999976652 26799999999999999998654
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.85 E-value=2.1e-19 Score=112.74 Aligned_cols=109 Identities=14% Similarity=0.232 Sum_probs=93.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||++.. +.+..+.. |...+.+++|+|++.++++++.|+.|++||+
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHNQ---------------TLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCC---------------ceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 5789999999999999999997543 45677777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ..... .+...+.+++|+|+ +.++++++.|+.|++||++.++
T Consensus 213 ~~~~----------~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 213 REGR----------QLQQH-DFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp TTTE----------EEEEE-ECSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSSC
T ss_pred CCCc----------eEeee-cCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCC
Confidence 8764 22222 46778999999999 9999999999999999998754
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.85 E-value=7.5e-20 Score=117.36 Aligned_cols=110 Identities=18% Similarity=0.286 Sum_probs=91.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC--C---ccCeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--H---GRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|+|++ +|++++.|+.|++||++.. +++..+... | ...|.+++|+|++.++++++.|
T Consensus 194 ~~~~~-~l~~~~~dg~i~i~d~~~~---------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~ 257 (397)
T 1sq9_A 194 ISERG-LIATGFNNGTVQISELSTL---------------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 257 (397)
T ss_dssp ECTTS-EEEEECTTSEEEEEETTTT---------------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred ECCCc-eEEEEeCCCcEEEEECCCC---------------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCC
Confidence 57889 9999999999999997542 334444431 5 7899999999999999999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecc-------------cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRA-------------HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|++||+.... ....... |...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 258 g~i~i~d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 258 GCITLYETEFGE----------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEEEETTTCC----------EEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCc----------ccceeccCcccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCc
Confidence 999999998765 3333334 8899999999999 9999999999999999998754
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=8.4e-20 Score=118.84 Aligned_cols=113 Identities=20% Similarity=0.383 Sum_probs=91.6
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+| ++.+|++++.|+.|++||++..... +++..+.. |...|.+++|+|++. ++++++.|+.|++|
T Consensus 239 ~~p~~~~~l~s~~~dg~i~i~d~~~~~~~------------~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 239 WHLLHESLFGSVADDQKLMIWDTRNNNTS------------KPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCSCSS------------SCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCCCC------------cceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 467 6789999999999999998764311 22445556 889999999999997 78999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
|++... .....+..|...|++++|+|+...+|++++.|+.|++||++.
T Consensus 306 d~~~~~---------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 306 DLRNLK---------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTCTT---------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCCC---------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 998643 133344578899999999999346799999999999999976
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.85 E-value=3.3e-20 Score=117.33 Aligned_cols=124 Identities=15% Similarity=0.189 Sum_probs=92.1
Q ss_pred Ccc---CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEE
Q psy14817 1 MIQ---TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIR 76 (138)
Q Consensus 1 ~s~---~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~ 76 (138)
|+| ++++|++++.|+.|++||++..... .. .....+.. |...|.+++|+|++. ++++++.|+.|+
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---------~~-~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPT---------KG-FASVSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETT---------TE-EEEEEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcc---------cc-eeeeccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 466 8999999999999999998654321 11 11123346 889999999999998 899999999999
Q ss_pred EEeccCCCCCCc----------eeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSD----------MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~ 137 (138)
+|+++....... ..... .......|...|++++|+|+ +.+|+ +++.|+.|++||+...+
T Consensus 286 iwd~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 286 LWKYEYPIQRSKKDSEGIEMGVAGSVS-LLQNVTLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSCC--CCTTSCCCCCCCEEE-EEEEEECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC--
T ss_pred EeecCCCcccccccCCCCccccccccc-eeeccccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCcc
Confidence 999986541110 00111 22334578899999999999 88777 89999999999998764
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.85 E-value=6.5e-20 Score=117.68 Aligned_cols=135 Identities=16% Similarity=0.190 Sum_probs=93.3
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCC-CCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTP-DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++ +|++|+.|+.|++||++........... .............. |...|.+++|+|++.++++++.|+.|++|
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 578888 5999999999999998765421110000 00000011112234 78899999999999999999999999999
Q ss_pred eccCCCCCCce---------------------------------eee----eeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 79 KENPEAGDSDM---------------------------------VSF----DLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 79 ~~~~~~~~~~~---------------------------------~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
|+..+...... ..+ ........+|...|++++|+|+ +.+|++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s 351 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN-FQELYS 351 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT-TTEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC-CCEEEE
Confidence 99875411000 000 0112333578899999999999 999999
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
++.||.|++||+++.+
T Consensus 352 ~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 352 GSRDCNILAWVPSLYE 367 (408)
T ss_dssp EETTSCEEEEEECC--
T ss_pred ECCCCeEEEEeCCCCC
Confidence 9999999999998764
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.85 E-value=3.9e-20 Score=127.86 Aligned_cols=111 Identities=21% Similarity=0.333 Sum_probs=95.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++|++... +.+..+.+ |...|.+++|+|+++++++++.|+.|++|++
T Consensus 63 ~s~~~~~l~~~~~dg~i~vw~~~~~---------------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 63 FIARKNWIIVGSDDFRIRVFNYNTG---------------EKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 6899999999999999999997543 34667777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ........|...|.+++|+| + +..+++++.|+.|++||++++.
T Consensus 127 ~~~~---------~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 127 ENNW---------ALEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp GGTS---------EEEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSS
T ss_pred CCCc---------eEEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 8653 13344457889999999999 6 8899999999999999997654
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.2e-20 Score=119.62 Aligned_cols=111 Identities=18% Similarity=0.360 Sum_probs=93.3
Q ss_pred CccCC-CeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEec-CCCeEEEeeCCCc
Q psy14817 1 MIQTG-SRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCH-LTDLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~-~~~~~~s~~~d~~ 74 (138)
|+|++ .++++++.|+ .|++||++.... ++..+. + |...|.+++|+| ++.++++++.|+.
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--------------~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANT--------------PLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTS--------------CSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCC--------------CcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 57886 6899999999 999999875422 134455 5 788999999999 8889999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC-CEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... .......|...|++++|+|+ + .++++++.|+.|++||++...
T Consensus 287 v~~wd~~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 287 VLLWNPESAE----------QLSQFPARGNWCFKTKFAPE-APDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEECSSSCC----------EEEEEECSSSCCCCEEECTT-CTTEEEECCSSSEEEEEESCCCC
T ss_pred EEEeeCCCCc----------cceeecCCCCceEEEEECCC-CCCEEEEEecCCcEEEEEccCCC
Confidence 9999998766 44445578899999999999 6 899999999999999997654
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=1.1e-19 Score=118.28 Aligned_cols=120 Identities=23% Similarity=0.403 Sum_probs=91.7
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++ +|++|+.||.|++|++...... .....+...+.. |...|.+++|+| ++.+|++++.|+.|++|
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKE--------HRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBG--------GGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCC--------CceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence 578887 9999999999999998653221 111122455666 889999999999 55699999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++..... ........|...|++++|+|+...++++++.|+.|++||++..
T Consensus 260 d~~~~~~~-------~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 260 DTRNNNTS-------KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp ETTCSCSS-------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred ECCCCCCC-------cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99865200 0122234788999999999983447999999999999999873
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=6.7e-20 Score=116.74 Aligned_cols=120 Identities=13% Similarity=0.229 Sum_probs=89.2
Q ss_pred CccCCCeEEEeeCCCc-EEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++ |++||++.. +++..+. +.|...|.+++|+|++.++++++.|++|++|
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~~---------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTEDG---------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTTC---------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 6899999999999998 999997543 4466776 3378999999999999999999999999999
Q ss_pred eccCCCCCCceeeee-------------eeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFD-------------LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+............. ...............++|+++ +..+++++.||.+++|++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d-~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE-SSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS-SEEEEEETTTTEEEEEEEEEE
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC-CCEEEEEeCCCeEEEEEEEcC
Confidence 998653111100000 000011112233467899999 999999999999999997653
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.2e-19 Score=116.95 Aligned_cols=120 Identities=13% Similarity=0.172 Sum_probs=88.0
Q ss_pred CccCCC-eEEEeeCCCcEEEeec----cCCCCCCCccCCCCCCceEEeEEecCC-----CccCeEEEEEecCCCeEEEee
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKE----YKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~s~~ 70 (138)
|+|+++ +||+|+.|+.|++|++ ......... .........+..+ |...|.+++|+|++.++++++
T Consensus 53 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 53 WNPLDESILAYGEKNSVARLARIVETDQEGKKYWKL-----TIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp ECSSCTTEEEEEETBTEEEEEEEEEC------CEEE-----EEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCcEEEEecCCceEEEEEEecccCCccccccc-----cccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 689999 9999999999999998 433210000 0000111112221 577999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|+.|++|+.. +. .......|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 128 ~dg~i~i~~~~-~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 128 ENGELRLWNKT-GA----------LLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp TTSCEEEEETT-SC----------EEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTE
T ss_pred CCCeEEEEeCC-CC----------eeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCc
Confidence 99999999933 32 33344578899999999999 9999999999999999997653
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=8.1e-20 Score=114.00 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=87.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE--ecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT--LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
||+++ +||+| .|++|+|||+... +++.. +.+ |...|.+++|+|+++++++|+.|++|++|
T Consensus 33 WS~~~-~lAvg-~D~tV~iWd~~tg---------------~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 33 WSSGN-VLAVA-LDNSVYLWSASSG---------------DILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSSAEVQLW 94 (318)
T ss_dssp ECTTS-EEEEE-ETTEEEEEETTTC---------------CEEEEEECCS-TTCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCCC-EEEEE-eCCEEEEEECCCC---------------CEEEEEEecC-CCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 46654 77766 5999999997543 23443 344 77889999999999999999999999999
Q ss_pred eccCCCCCC------c-ee-------------------ee-----eeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 79 KENPEAGDS------D-MV-------------------SF-----DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 79 ~~~~~~~~~------~-~~-------------------~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
++..++... . .. .. .........|...+..+.+.++ +.++++++.|+.
T Consensus 95 ~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~ 173 (318)
T 4ggc_A 95 DVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNL 173 (318)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred ecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-CCEEEEEecCcc
Confidence 998764100 0 00 00 0011233467888999999999 999999999999
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+++++
T Consensus 174 i~iwd~~~~~ 183 (318)
T 4ggc_A 174 VNVWPSAPGE 183 (318)
T ss_dssp EEEEESSCBT
T ss_pred eeEEECCCCc
Confidence 9999998754
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.84 E-value=1.1e-19 Score=118.18 Aligned_cols=111 Identities=10% Similarity=0.146 Sum_probs=86.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-------EecCCCccCeEEEEEecCC-CeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-------TLSGHHGRTIYDISWCHLT-DLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~v~~~~~~-~~~~s~~~d 72 (138)
|+|++++|++| .|+.|++||+... .+++. .+.+ |...|.+++|+|++ .++++++.|
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~--------------~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEIT--------------DRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEE--------------EEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEETT
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCC--------------Cceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeCC
Confidence 58999999999 7999999997421 12233 2445 88899999999999 899999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccc------------cceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHN------------QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.|++||++....... ....+..|. ..|.+++|+|+ +.+|++++. +.|++||++.
T Consensus 249 g~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 249 GTIRLCDMRASALCDR------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp SCEEEEETTTCSSSCT------TCEEECCC-----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTC
T ss_pred CeEEEEECcCCccccc------eeeEeccCCCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCC
Confidence 9999999987651000 012223444 38999999999 999999998 9999999986
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6e-20 Score=118.33 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=92.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+.... ++..+.. |...|.++.|+|++ .+++++.|+.|++||+
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~---------------~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGN---------------SQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSL 317 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBS---------------CSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCc---------------cceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence 57899999999999999999976542 2456666 78899999999999 9999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... .......|...|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 318 ~~~~----------~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 318 KQNT----------LLALSIVDGVPIFAGRISQD-GQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TTTE----------EEEEEECTTCCEEEEEECTT-SSEEEEEETTSCEEEEECHHH
T ss_pred CCCc----------EeEecccCCccEEEEEEcCC-CCEEEEEECCCeEEEEECCCC
Confidence 8765 34444578889999999999 999999999999999998754
No 97
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1e-19 Score=115.20 Aligned_cols=125 Identities=11% Similarity=0.022 Sum_probs=87.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCc-----cC---------CCCC-----------------CceEEeEEecCCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGI-----PT---------PDND-----------------SVWKCVCTLSGHH 50 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~-----~~---------~~~~-----------------~~~~~~~~~~~~~ 50 (138)
.+++++|++|+.||.|++||+......... .. .... ...+.+..+...|
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 456778888888888888887654321100 00 0000 0111233333225
Q ss_pred ccCeEEEEEec--CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 51 GRTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~--~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
...|.+++|+| ++.++++++.|++|++||++.+. ..... ..+...+++++|+|+ +.+|++|+.|+.
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~----------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS----------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC----------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc----------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 67899999999 99999999999999999999766 22222 245567999999999 999999999999
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+++++
T Consensus 194 i~iwd~~~~~ 203 (343)
T 3lrv_A 194 LDVYNLSSPD 203 (343)
T ss_dssp EEEEESSCTT
T ss_pred EEEEECCCCC
Confidence 9999998875
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.84 E-value=1.3e-19 Score=129.98 Aligned_cols=109 Identities=29% Similarity=0.496 Sum_probs=95.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|+|+ +.++++++.|+.|++|
T Consensus 665 ~s~~~~~l~s~~~d~~v~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 665 FSSDDSYIATCSADKKVKIWDSATG---------------KLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EecCCCEEEEEeCCCeEEEEECCCC---------------ceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 6899999999999999999997543 45777888 8999999999995 4589999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. ......+|...|++++|+|+ +.++++++.|+.|++||++++
T Consensus 729 d~~~~~----------~~~~~~~h~~~v~~~~~sp~-~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 729 DLNQKE----------CRNTMFGHTNSVNHCRFSPD-DELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ETTSSS----------EEEEECCCSSCEEEEEECSS-TTEEEEEESSSEEEEEEGGGT
T ss_pred ECCCcc----------hhheecCCCCCEEEEEEecC-CCEEEEEECCCeEEEEeCCCC
Confidence 999876 44445689999999999999 999999999999999998765
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=2.3e-19 Score=117.37 Aligned_cols=107 Identities=24% Similarity=0.370 Sum_probs=92.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++++++++|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+.
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQM---------------KCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred cCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 467899999999999999997533 56778888 89999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.++.|+ +.++++++.|+.|++||++++.
T Consensus 341 ~~~----------~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 341 NGE----------LMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred CCc----------EEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCc
Confidence 765 444556899999999995 5799999999999999998753
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=9.1e-20 Score=114.87 Aligned_cols=109 Identities=14% Similarity=0.029 Sum_probs=90.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++++.|+.|++|++..... ......+.. |...|.+++|+|++. ++++++.|+.|++|+
T Consensus 19 ~s~~~~~l~~~~~d~~v~iw~~~~~~~------------~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 19 IIPSKSLLLITSWDGSLTVYKFDIQAK------------NVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTT------------EEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCCeEEEEEeCCCCc------------cccceeeee-cCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 678999999999999999999865431 122334445 789999999999999 999999999999999
Q ss_pred c-cCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 E-NPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+ .... . ..... |...|.+++|+| +..+++++.|+.|++||+++
T Consensus 86 ~~~~~~----------~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 86 LIGSPS----------F-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SSSSSS----------E-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHH
T ss_pred eccCCc----------e-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccc
Confidence 9 7654 2 33346 889999999999 78999999999999999875
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.83 E-value=2.7e-19 Score=116.10 Aligned_cols=108 Identities=19% Similarity=0.332 Sum_probs=86.0
Q ss_pred CccCC-CeEEE--eeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee--CCCcE
Q psy14817 1 MIQTG-SRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAI 75 (138)
Q Consensus 1 ~s~~~-~~l~t--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~d~~i 75 (138)
|+|.+ .++++ |+.|++|++||+... +++..+.. ...+.++.|++++..+++++ .|+.|
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~---------------~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSG---------------ACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQL 346 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCcc---------------ccceeecc--ccceeeeeecCCCCeEEEEEecCCCEE
Confidence 34544 45554 568999999997543 44566554 46789999999999777654 78999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
++||+..+. ....+.+|...|++++|+|+ +.+|++|+.|++|++||+...
T Consensus 347 ~iwd~~~~~----------~v~~l~gH~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 347 VIWKYPTMA----------KVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEETTTCC----------EEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCS
T ss_pred EEEECCCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCC
Confidence 999998876 45556689999999999999 999999999999999998653
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.6e-19 Score=119.87 Aligned_cols=116 Identities=9% Similarity=0.121 Sum_probs=86.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe----cCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL----SGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|||+|++||+|+.||+|+||++...... ....-.+.++ .+ |...|.+++|+|++ +++++.|++++
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~--------~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSEN--------TPEFYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTT--------CCCCEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccc--------cccceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 7999999999999999999998653210 0111134554 45 77899999999999 88889999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++..... . .........|...|.+++|+ ++.+++++ ++.|++||+.+++
T Consensus 206 lWd~~~~~~---~---~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 206 SMTVSASSH---Q---PVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYS 256 (588)
T ss_dssp EECCCSSSS---C---CCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTE
T ss_pred EEECCCCcc---c---cceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCe
Confidence 999986540 0 00011223677899999998 47888887 6999999988764
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.3e-19 Score=117.33 Aligned_cols=118 Identities=12% Similarity=0.026 Sum_probs=90.5
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++| ++|+.|+.|++|++..... +++..+.. .|...|.+++|+|++.++++++.++.+++|
T Consensus 110 ~s~d~~~l~~~~~~dg~v~iwd~~~~~~-------------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 110 LTSDESRLIACADSDKSLLVFDVDKTSK-------------NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECSSSS-------------SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCCEEEEEECCCCeEEEEECcCCCC-------------ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 68999996 9999999999999862111 12333331 156789999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccC--CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV--VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++........ ......+|...|++++|+|+ .+.+|++++.|+.|++||+++++
T Consensus 177 ~~~~~~~~~~------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 177 DINSIPEEKF------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp ETTSCCCSSC------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred ecCCcccccc------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 9986551100 11133478899999999996 26689999999999999998764
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.83 E-value=8.2e-20 Score=117.75 Aligned_cols=117 Identities=14% Similarity=0.172 Sum_probs=84.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
++++||+|+.|++|+|||+... .++..+.. |...+.+++|+|++. ++++++.|++|++||+..
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~---------------~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDE---------------GPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETT---------------EEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEECCCeEEEEECCCC---------------ceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 7899999999999999998543 33555556 788999999999886 899999999999999987
Q ss_pred CCCCCceee---------eee------eeeeecccccceeEEEEc-cCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVS---------FDL------VHTEHRAHNQDVNCVAWN-PVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~---------~~~------~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+........ ... .......|...+.++.|. |+ +..+++++.|+.+++||+..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d-g~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD-GSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT-TCEEEEECTTSEEEEEEC----
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC-CCEEEEEeCCCCEEEEECccCC
Confidence 652111000 000 011123577889999987 56 9999999999999999987653
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.83 E-value=1.1e-18 Score=111.97 Aligned_cols=118 Identities=20% Similarity=0.312 Sum_probs=91.6
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
+++.++++++.|+.|++||++.... +..+.. |...|.+++|+|++. ++++++.|+.|++||++
T Consensus 154 ~~~~~~~~~~~~~~v~~~d~~~~~~---------------~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 154 TKHCLVAVGTRGPKVQLCDLKSGSC---------------SHILQG-HRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp SSCCEEEEEESSSSEEEEESSSSCC---------------CEEECC-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEcCCCeEEEEeCCCcce---------------eeeecC-CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 4667999999999999999865432 566677 889999999999998 58999999999999998
Q ss_pred CCCCCCcee------eeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMV------SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
......... ...........|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD-GLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCcccccccccccccceeeccccccccCceeEEEEcCC-CCEEEEecCCCeEEEEECCCCc
Confidence 654111000 000011122468889999999999 9999999999999999998754
No 106
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.83 E-value=8.5e-20 Score=115.42 Aligned_cols=113 Identities=12% Similarity=0.213 Sum_probs=88.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec---CCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~s~~~d~~i~i 77 (138)
|+|++++|++++.|+.|++||++.. +... ... |...|.+++|+| ++.++++++.|+.|++
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~-~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNM---------------ALRW-ETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTT---------------EEEE-EEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccC---------------ceee-ecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 5789999999999999999997543 2222 233 678999999999 8899999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~ 136 (138)
||++....... . .......|...|++++|+|+ +. ++++++.|+.|++||++.+
T Consensus 239 ~d~~~~~~~~~---~--~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 239 FDMRTQHPTKG---F--ASVSEKAHKSTVWQVRHLPQ-NRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEEETTTE---E--EEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEEEECC
T ss_pred EeCcCCCcccc---e--eeeccCCCcCCEEEEEECCC-CCcEEEEEeCCCcEEEeecCCC
Confidence 99986541100 0 11122378899999999998 76 8999999999999998754
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.83 E-value=7.5e-19 Score=113.35 Aligned_cols=109 Identities=19% Similarity=0.350 Sum_probs=91.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|++|+.|+.|++||++... ..+..+.. |...|.+++|+|++.++++++.|+.|++||+...
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIAN--------------HQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSS--------------CEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred CCCEEEEEcCCCCEEEEecccCc--------------ceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 57899999999999999985322 23566777 8999999999999999999999999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--CCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--DDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~wd~~~~~ 137 (138)
. .......|...|.+++|+|+...++++++ .|+.|++||+++++
T Consensus 250 ~----------~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 250 I----------PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp S----------EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred C----------ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 5 33444578899999999998456777765 79999999998764
No 108
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.3e-19 Score=114.40 Aligned_cols=112 Identities=21% Similarity=0.295 Sum_probs=91.7
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-----CccCeEEEEEecCC-CeEEEeeCCC
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLT-DLIATACGDD 73 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~-~~~~s~~~d~ 73 (138)
|+|+ +++|++++.|+.|++||++.. +++..+..+ |...+.+++|+|++ .++++++.|+
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~---------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAK---------------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTT---------------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCC---------------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 5777 789999999999999997543 345555551 17889999999998 4899999998
Q ss_pred ---cEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 ---AIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ---~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|++||++... ....... .|...|++++|+| + +.+|++++.|+.|++||+++++
T Consensus 238 ~~~~i~~~d~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~-~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 238 NDPSILIWDLRNAN---------TPLQTLNQGHQKGILSLDWCHQD-EHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp SSCCCCEEETTSTT---------SCSBCCCSCCSSCEEEEEECSSC-SSCEEEEESSSEEEEECSSSCC
T ss_pred CCceEEEEeCCCCC---------CCcEEeecCccCceeEEEeCCCC-CCeEEEEeCCCCEEEeeCCCCc
Confidence 99999998753 1333444 7889999999999 6 9999999999999999998764
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.82 E-value=6.3e-19 Score=111.71 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=91.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------- 73 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~------- 73 (138)
|+|++++|++++.|+.|++||++.. +.+..+. +...+..+.|+|++.++++++.++
T Consensus 226 ~~~~~~~l~~~~~d~~i~v~d~~~~---------------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3zwl_B 226 FSPDLTYFITSSRDTNSFLVDVSTL---------------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTT 288 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------
T ss_pred ECCCCCEEEEecCCceEEEEECCCC---------------ceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEE
Confidence 5899999999999999999997543 2344444 467899999999999999999888
Q ss_pred -------cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 74 -------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 74 -------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+++|+..... .......|...|++++|+|+ +++|++++.|+.|++|+++.+
T Consensus 289 ~~~~~~~~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 289 SANEGKFEARFYHKIFEE----------EIGRVQGHFGPLNTVAISPQ-GTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ------CEEEEEETTTCC----------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEEECHH
T ss_pred ecCCCcceeEEEecCCCc----------chhheecccCcEEEEEECCC-CCEEEEEcCCCeEEEEECccc
Confidence 79999988776 44445678999999999999 999999999999999998754
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.82 E-value=6.6e-19 Score=112.60 Aligned_cols=115 Identities=9% Similarity=0.031 Sum_probs=85.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC----cEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----AIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~----~i~ 76 (138)
|+|+|+++++++.|+.+ +|+...... ........ |...|.+++|+|++..+++++.|+ .++
T Consensus 184 fspdg~~l~s~s~~~~~-~~~~~~~~~-------------~~~~~~~~-~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 184 FSTDGKVVAYITGSSLE-VISTVTGSC-------------IARKTDFD-KNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp ECTTSSEEEEECSSCEE-EEETTTCCE-------------EEEECCCC-TTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EccCCceEEeccceeEE-EEEeccCcc-------------eeeeecCC-CCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 68999999999866554 555322111 11223344 788899999999999999998887 578
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++.... ...........|...|++++|+|+ +++|++|+.|++|++||+++++
T Consensus 249 ~~~~~~~~------~~~~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 249 KISIKSGN------TSVLRSKQVTNRFKGITSMDVDMK-GELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEETTE------EEEEEEEEEESSCSCEEEEEECTT-SCEEEEEETTSCEEEEETTTTE
T ss_pred ecccccce------ecceeeeeecCCCCCeEeEEECCC-CCceEEEcCCCEEEEEECCCCc
Confidence 88877543 111112334578889999999999 9999999999999999998764
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.5e-19 Score=115.77 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=89.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC---CccCeEEEE--EecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDIS--WCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~--~~~~~~~~~s~~~d~~i 75 (138)
|+|++++|++|+.|+.|++||+......... ......++..+... +...+.++. +++++.++++++.|+.|
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEV----KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEE----EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCcee----eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 5789999999999999999998421000000 00011223333221 345677777 55788899999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++||++... ....... |...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 195 ~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 195 IIFDIRTLE----------RLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp EEEETTTCC----------EEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCCe----------eeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCcc
Confidence 999998766 3333334 7889999999999 9999999999999999998754
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.82 E-value=1.6e-18 Score=116.35 Aligned_cols=109 Identities=16% Similarity=0.296 Sum_probs=93.8
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecC-CCeEEEeeCCCcE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHL-TDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~-~~~~~s~~~d~~i 75 (138)
|+|+++ .+++++.|+.|++||+. ..+++..+.. |.. .|.+++|+|+ +.++++++.|+.|
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~---------------~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGP---------------PFKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETT---------------TBEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCC---------------Ccceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 578887 89999999999999953 2356778887 788 9999999999 9999999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeee-c---ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEH-R---AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++||+..+. ..... . .|...|.+++|+ + +.++++++.|+.|++||+++++
T Consensus 232 ~vwd~~~~~----------~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 232 SCFDGKSGE----------FLKYIEDDQEPVQGGIFALSWL-D-SQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EEEETTTCC----------EEEECCBTTBCCCSCEEEEEES-S-SSEEEEEETTSEEEEEETTTTE
T ss_pred EEEECCCCC----------EeEEecccccccCCceEEEEEc-C-CCEEEEEcCCCcEEEEECCCCc
Confidence 999998766 33333 4 788999999999 7 9999999999999999998653
No 113
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.82 E-value=9.8e-19 Score=108.81 Aligned_cols=104 Identities=22% Similarity=0.425 Sum_probs=88.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++++.|+.|++||.. +....+...|...+.+++|+|++. +++++.|+.|++||++..
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND-----------------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT-----------------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCCEEEEecC-----------------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 88999999999999999932 335555555788999999999988 899999999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. .......|...|++++|+|+ + .+++++.|+.|++||+++++
T Consensus 216 ~----------~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 216 D----------VLRTYEGHESFVYCIKLLPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp C----------EEEEEECCSSCEEEEEECTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred h----------hhhhhhcCCceEEEEEEecC-C-CEEEEecCCEEEEEECCCCc
Confidence 6 44445578899999999998 6 68899999999999998764
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.82 E-value=4.5e-19 Score=112.37 Aligned_cols=67 Identities=19% Similarity=0.374 Sum_probs=56.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEE--ecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++++.|+.|++||+... +.+. +.. |...|.+++| ++++.++++++.|+.|++|
T Consensus 94 ~~~~~~~l~s~~~dg~v~iwd~~~~---------------~~~~-~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 94 WSDDGSKVFTASCDKTAKMWDLSSN---------------QAIQ-IAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTT---------------EEEE-EEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred ECcCCCEEEEEcCCCcEEEEEcCCC---------------Ccee-ecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 6899999999999999999997543 2233 344 7899999999 8888899999999999999
Q ss_pred eccCCC
Q psy14817 79 KENPEA 84 (138)
Q Consensus 79 ~~~~~~ 84 (138)
|++...
T Consensus 157 d~~~~~ 162 (368)
T 3mmy_A 157 DTRSSN 162 (368)
T ss_dssp CSSCSS
T ss_pred ECCCCc
Confidence 998654
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.81 E-value=7.7e-19 Score=121.20 Aligned_cols=114 Identities=24% Similarity=0.452 Sum_probs=93.6
Q ss_pred CccC--CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEE
Q psy14817 1 MIQT--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~ 76 (138)
|+|+ +++|++|+.||.|++||+... .+..+..+.. |...|.+++|+|+ +..+++++.|+.|+
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~-------------~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENG-------------RWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETT-------------EEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCC-------------cccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 4566 899999999999999998543 2245677777 8999999999999 88999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC------------CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV------------VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+||+...... .......|...|.+++|+|. ++..+++++.||.|++||++++
T Consensus 127 vwdl~~~~~~--------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 127 VVEFKENGTT--------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp EEECCSSSCC--------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred EEEeecCCCc--------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 9999876310 12223478889999999993 2889999999999999999765
No 116
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.81 E-value=1.2e-18 Score=110.37 Aligned_cols=111 Identities=19% Similarity=0.335 Sum_probs=85.3
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecC----CCeEEEeeCCCcEEEEe
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHL----TDLIATACGDDAIRIFK 79 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~----~~~~~s~~~d~~i~i~~ 79 (138)
...+++++.++.|++|++..... ...+..+. ..|...|.+++|+|+ +.++++++.|+.|++||
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d 101 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGE------------IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIIN 101 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGC------------EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEEC
T ss_pred CceEEEECCCCEEEEEEcCCCcE------------EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEE
Confidence 44566666677999999864322 12222222 125678999999999 56899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..+. .......|...|.+++|+|+++.+|++++.|+.|++||+++++
T Consensus 102 ~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 102 PITMQ----------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp TTTCC----------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred chhce----------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 98766 3444557999999999999339999999999999999998754
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.80 E-value=3.9e-18 Score=111.04 Aligned_cols=105 Identities=22% Similarity=0.472 Sum_probs=89.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++++|++|+.|+.|++||+... +++..+.+ |...|.++.| ++..+++|+.||.|++||+.
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTL---------------ECKRILTG-HTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSC---------------CEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred EECCCEEEEEeCCCeEEEEeCCCC---------------eEEEEEcC-CCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 457899999999999999997433 44677788 8999999998 68899999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.+++|+ +..+++++.|+.|++||+++++
T Consensus 202 ~~~----------~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 202 TGE----------MLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp SCC----------EEEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSS
T ss_pred CCc----------EEEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCC
Confidence 876 444455789999999995 4599999999999999998754
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.80 E-value=2.1e-18 Score=108.63 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=85.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccC-CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEe
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~ 79 (138)
+|++ +++++.|+.|++||++. .... ....... |...+.+++|+| ++.++++++.|+.+++|+
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~-------------~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDN-------------GTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCC-------------CEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred cCCc--EEEEeCCCeEEEEECCcccccc-------------ceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 4444 99999999999999865 3221 1122233 778999999999 999999999999999999
Q ss_pred ccCCCCC-Cceeeeeeeeeeeccc---------ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGD-SDMVSFDLVHTEHRAH---------NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++..... ... ....+..| ...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 223 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 223 FDDQGDDYNSS-----KRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCTTCCSTTCT-----TCEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred EcCCCcccccc-----cceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccHh
Confidence 9865100 000 11122233 449999999999 9999999999999999998764
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.79 E-value=1.5e-17 Score=107.98 Aligned_cols=109 Identities=21% Similarity=0.369 Sum_probs=93.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++||+|+.|+.|++||+... +++..+.+ |...+.++.++ +..+++|+.|+.+++|+.
T Consensus 155 fspdg~~lasgs~Dg~v~iWd~~~~---------------~~~~~~~~-h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 155 WIKEGNYLAVGTSSAEVQLWDVQQQ---------------KRLRNMTS-HSARVGSLSWN--SYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEEE--TTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEECCCeEEEEEcCCC---------------cEEEEEeC-CCCceEEEeeC--CCEEEEEeCCCceeEeee
Confidence 6899999999999999999997433 56788888 89999988775 679999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .....+..|...+..+.++|+ +.++++++.|+.+++|+...++
T Consensus 217 ~~~~---------~~~~~~~~h~~~~~~~~~~~~-g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 217 RVAE---------HHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp TSSS---------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEESSCCS
T ss_pred cccc---------eeeEEecccccceeeeeecCC-CCeeeeeeccccceEEeecccc
Confidence 8654 133344588999999999999 9999999999999999987653
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.79 E-value=5.5e-18 Score=110.53 Aligned_cols=105 Identities=23% Similarity=0.481 Sum_probs=84.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|++|++|+.||.|++||+... +++..+.+ |...|.++.|+ +..+++++.|++|++||+.
T Consensus 126 ~~~g~~l~sg~~dg~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 126 QFCGNRIVSGSDDNTLKVWSAVTG---------------KCLRTLVG-HTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTC---------------CEEEECCC-CSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEcCCEEEEEECCCcEEEEECCCC---------------cEEEEEcC-CCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 467899999999999999997433 44677777 88999999997 5699999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.++.++ +..+++++.|+.|++||+++++
T Consensus 188 ~~~----------~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 188 TGE----------CIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCC
T ss_pred cCc----------EEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCc
Confidence 765 334445788888888884 4578888888888888887654
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.77 E-value=1.6e-17 Score=108.14 Aligned_cols=102 Identities=25% Similarity=0.455 Sum_probs=87.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++|+.|+.|++||++.. +++..+.+ |...|.++.+ ++.++++|+.|+.|++||++.+
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTC---------------EFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCcC---------------cEEEEEcC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence 6789999999999999997543 44677777 8899999998 4679999999999999999977
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. .......|...|.+++| + +.++++++.||.|++||++.+
T Consensus 327 ~----------~~~~~~~h~~~v~~~~~--~-~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 327 A----------CLRVLEGHEELVRCIRF--D-NKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp C----------EEEEECCCSSCEEEEEC--C-SSEEEEEETTSCEEEEEHHHH
T ss_pred C----------EEEEEeCCcCcEEEEEe--c-CCEEEEEeCCCcEEEEECCCC
Confidence 6 44455689999999999 5 889999999999999998643
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.75 E-value=9.1e-17 Score=104.81 Aligned_cols=102 Identities=19% Similarity=0.359 Sum_probs=72.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
++.+++|+.|+.|++||+... +++..+.+ |...+.++.+ ++..+++++.|+.|++||++...
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETG---------------QCLHVLMG-HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSC---------------CEEEEEEC-CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred CCEEEEEeCCCEEEEEECCCC---------------cEEEEEcC-CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence 445666666666666664322 34556666 7788888887 57788888888888888887654
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.......|...|.++.| + +.++++++.|+.|++||+++++
T Consensus 271 ----------~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 271 ----------CLHTLQGHTNRVYSLQF--D-GIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp ----------EEEEECCCSSCEEEEEE--C-SSEEEEEETTSCEEEEETTTCC
T ss_pred ----------EeEEecCCCCceEEEEE--C-CCEEEEEeCCCeEEEEECCCCC
Confidence 33344567788888888 5 7788888888888888887654
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.73 E-value=6.7e-17 Score=101.80 Aligned_cols=99 Identities=8% Similarity=-0.051 Sum_probs=70.6
Q ss_pred CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec---CCCeEEEeeCCCcEEEEeccCCCCCCce
Q psy14817 13 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFKENPEAGDSDM 89 (138)
Q Consensus 13 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~s~~~d~~i~i~~~~~~~~~~~~ 89 (138)
.|+.|++|++... .+.+..+.. |...+..++|++ ++..+++++.|++|+|||+..++
T Consensus 155 ~d~~V~~~~~s~d--------------G~~~~s~~~-~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk----- 214 (356)
T 2w18_A 155 SDQQVEVMTFAED--------------GGGKENQFL-MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ----- 214 (356)
T ss_dssp TTCEEEEEEECTT--------------SCEEEEEEE-CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC-----
T ss_pred CCCcEEEEEECCC--------------Cceeeeecc-CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc-----
Confidence 3788888886322 233455556 777888888888 66899999999999999999876
Q ss_pred eeeeeeeeeeccc---ccceeEEEEccCCCCEE------------EEEeCCCcEEEEEcCCCC
Q psy14817 90 VSFDLVHTEHRAH---NQDVNCVAWNPVVPGML------------ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 90 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l------------~~~~~d~~v~~wd~~~~~ 137 (138)
....+.+| ...+.+++|+|+ +.++ ++|+.|++|++||..+++
T Consensus 215 -----~l~tL~g~~~~v~~v~~vafSpd-G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 215 -----LLKKMHIDDSYQASVCHKAYSEM-GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp -----EEEEEECCC---CCCEEEEEEET-TEEEEEEC------------CCEEEEEEETTTTE
T ss_pred -----EEEEEcCCCcceeeeEEEEECCC-CCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 33333333 346777899998 7765 568889999999988764
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=3.4e-16 Score=102.22 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=81.5
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|++++.|++|++||++.. ..+....+ |...|.+++|+|++.+|++|+.|+.|++||
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~---------------~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTET---------------VKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSS---------------EEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCC---------------cceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 5787 789999999999999998543 22444455 788999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE-EeCCCc------EEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDDGD------VKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~------v~~wd~~~~ 136 (138)
++ +. ..............|...|.+++|+++ ..++++ .+.||. +++|+++..
T Consensus 221 ~~-~~---~~~~~~~~~~~~~~~~~~v~~v~w~~~-~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 221 PT-LQ---EKKVIPCPPFYESDHPVRVLDVLWIGT-YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TT-CC---EEEEECCCTTCCTTSCEEEEEEEEEET-TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cC-Cc---ccccccCCcccCCCCceeEEEEEEecC-ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 87 32 000000000000123448999999997 666644 444433 899998754
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.70 E-value=2.6e-16 Score=102.08 Aligned_cols=110 Identities=12% Similarity=0.093 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-----EecCCCccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-----TLSGHHGRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
|+|++.++++++.|+.|++||+.... .+. .+.+ |...+.+++|++++.++++++.|+.|
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~g~---------------~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINSGQ---------------TVRLSPPEKYKK-KLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTTCC---------------EEEECCCHHHHT-TCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EeCCCeEEEEeCCCCeEEEEECCCCe---------------EeeecCcccccc-cCCceeEEEEcCCCEEEEEECCCCEE
Confidence 46778889999999999999975432 122 3345 77899999999999999999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
++||+.... .......|...+.+++|+|+ +..+ ++++.|+.|++||+++++
T Consensus 194 ~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 194 HVFDLKTLA----------YKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EEEETTTCC----------EEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEECCCce----------EEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCc
Confidence 999998765 33333467789999999999 7766 455589999999998754
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.67 E-value=3e-15 Score=95.92 Aligned_cols=108 Identities=11% Similarity=0.156 Sum_probs=82.8
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~ 78 (138)
|+|+++++ ++++.|+.|++||+... +.+..+.. ...+.+++|+|++.++ +++..++.|++|
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~---------------~~~~~~~~--~~~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATN---------------NVIATVPA--GSSPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTT---------------EEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCC---------------eEEEEEEC--CCCccceEECCCCCEEEEEECCCCEEEEE
Confidence 58899876 78889999999997432 44566654 3389999999999966 455567999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+. ..... .+...+..++|+|+ ++.+ ++++.|+.|++||+++++
T Consensus 102 d~~~~~----------~~~~~-~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 102 DTTSNT----------VAGTV-KTGKSPLGLALSPD-GKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp ETTTTE----------EEEEE-ECSSSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTE
T ss_pred ECCCCe----------EEEEE-eCCCCcceEEECCC-CCEEEEEeCCCCEEEEEECCCCc
Confidence 998764 22222 23457899999999 7766 788889999999998754
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.67 E-value=2.1e-15 Score=97.78 Aligned_cols=109 Identities=8% Similarity=0.064 Sum_probs=85.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
|+|+++++++++.|+.|++||+... +.+..+.. |...+.+++|+|++..+ ++++.++.|++||
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTL---------------AYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCEEEEEECCCCEEEEEECCCc---------------eEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 4688999999999999999997432 33556666 78899999999999966 4555799999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--------CCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--------DDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------~d~~v~~wd~~~~~ 137 (138)
+..+. ..... .....+.+++|+|+ +..+++++ .|+.|++||+++++
T Consensus 241 ~~~~~----------~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 241 RKTKL----------EIRKT-DKIGLPRGLLLSKD-GKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp TTTTE----------EEEEC-CCCSEEEEEEECTT-SSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred CCCCc----------EEEEe-cCCCCceEEEEcCC-CCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 98654 22222 23456899999999 88888887 58899999998754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.66 E-value=1.2e-14 Score=94.42 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=82.1
Q ss_pred CccCCCeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCCc--
Q psy14817 1 MIQTGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~~-- 74 (138)
|||+|++|++++.|+ .|++||+.... + ..+.. |...+.+++|+|++..++ +++.++.
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~---------------~-~~l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGA---------------V-RQVAS-FPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCC---------------E-EEEEC-CSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCc---------------E-EEeec-CCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 689999999999885 99999975432 1 23444 677899999999999666 6666654
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC--cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG--DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~v~~wd~~~~~ 137 (138)
|++||+..+. .. ....+...+..++|+|+ ++.|++++. ++ .|.+||+.+++
T Consensus 249 i~~~d~~~~~----------~~-~l~~~~~~~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 249 LYVMDLASGQ----------IR-QVTDGRSNNTEPTWFPD-SQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEETTTCC----------EE-ECCCCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEEEECCCCC----------EE-eCcCCCCcccceEECCC-CCEEEEEECCCCCcEEEEEECCCCC
Confidence 9999988765 22 23467788999999999 888887775 45 57777887654
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.62 E-value=3.2e-14 Score=91.20 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=83.5
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~ 78 (138)
|+|+++.+ ++++.|+.|++||+... +.+..+.. ...+.++.|+|++..+ ++++.++.|++|
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~ 185 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTK---------------AVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVI 185 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 57899877 78889999999997432 34555554 3467999999999866 677788999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~~ 137 (138)
|+.... ..... .+...+.+++|+|+ +..+++++ .++.|++||+++++
T Consensus 186 d~~~~~----------~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 186 DTVTNS----------VIDTV-KVEAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp ETTTTE----------EEEEE-ECSSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTE
T ss_pred ECCCCe----------EEEEE-ecCCCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCe
Confidence 998654 22222 34567899999999 88888777 68999999998653
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=4.3e-14 Score=94.69 Aligned_cols=108 Identities=7% Similarity=-0.070 Sum_probs=84.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++.++++++.|++|.+||.... +++.++.. +. .+..++++|+++++++++.|++|.+||+
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~---------------~~~~~i~~-g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK---------------KIVKVIDT-GY-AVHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-ST-TEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc---------------eEEEEEec-Cc-ccceEEECCCCCEEEEECCCCeEEEEEC
Confidence 5788899999999999999996432 44667764 22 3889999999999999999999999999
Q ss_pred --cCCCCCCceeeeeeeeeeecccccceeEEEEcc----CCCCEEEEEeC-CCcEEEEEcCCCC
Q psy14817 81 --NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPGMLASCSD-DGDVKLWQIKLEN 137 (138)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~-d~~v~~wd~~~~~ 137 (138)
.... ..... .+...+..++|+| + ++++++++. +++|.+||..+.+
T Consensus 208 ~~~t~~----------~~~~i-~~g~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 208 WAKEPT----------KVAEI-KIGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp TSSSCE----------EEEEE-ECCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCC
T ss_pred cCCCCc----------EEEEE-ecCCCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEeccccc
Confidence 4433 22222 2345679999999 9 998888884 8999999987654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.56 E-value=3.3e-13 Score=87.71 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCeEEEeeCC------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC---cE
Q psy14817 5 GSRLATCSDD------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AI 75 (138)
Q Consensus 5 ~~~l~t~s~d------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~---~i 75 (138)
+..++.++.+ +.|++||+.... ...+.. |...+.+++|+|+++.++.++.++ .|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----------------~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i 205 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----------------QFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSAL 205 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----------------CEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----------------CEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEE
Confidence 6667776664 799999974321 344555 678999999999999999998875 89
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCc--EEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGD--VKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~--v~~wd~~~~~ 137 (138)
++||+..+. ... ...+...+.+++|+|+ ++.|+ +++.|+. |++||+++++
T Consensus 206 ~~~d~~tg~----------~~~-l~~~~~~~~~~~~spd-g~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 206 VIQTLANGA----------VRQ-VASFPRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp EEEETTTCC----------EEE-EECCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCC
T ss_pred EEEECCCCc----------EEE-eecCCCcccCEEEcCC-CCEEEEEEecCCCceEEEEECCCCC
Confidence 999998765 222 2356778999999999 88776 6666665 9999998764
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=2.1e-13 Score=83.88 Aligned_cols=112 Identities=11% Similarity=0.004 Sum_probs=82.3
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|+|++++|+ +++.|+.+++|++..... ....+.. +...+.++.|+|++..++.++ .++.+.+|
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~--------------~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDIDSG--------------VETRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIW 200 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTTC--------------CEEECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred ECCCCCEEEEEECCCCceEEEEEECCCC--------------cceEccc-CCCccccceECCCCCEEEEEecCCCCccEE
Confidence 689999877 788999999999753221 1234444 677899999999999776655 58899999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----------CcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----------GDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----------~~v~~wd~~~~~ 137 (138)
++..... .......+...+..+.|+|+ +.+|++++.+ +.|.+||+.+++
T Consensus 201 ~~~~~~~---------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 201 RVRVDGS---------SVERITDSAYGDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp EEETTSS---------CEEECCCCSEEEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred EECCCCC---------CcEEEecCCcccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 8873320 12223356678889999999 9988887765 569999998764
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.54 E-value=1.6e-13 Score=94.41 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=81.1
Q ss_pred CccCCCeEEEeeC-CC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-----------------------
Q psy14817 1 MIQTGSRLATCSD-DA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG----------------------- 51 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 51 (138)
|||||++|++++. |+ .|++||+..... ...+.. +.
T Consensus 44 ~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~---------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 44 VAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT---------------RLLVDS-KVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp ECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE---------------EEEECG-GGTC--------------------C
T ss_pred EecCCCEEEEEeccCCCCcccEEEEEECCCCce---------------eEccch-hhcccccccccchhhhhhhhhhhcc
Confidence 6899999999998 88 999999754322 111111 11
Q ss_pred -cCeEEEEEecCCCeEEEeeCCCcEEEEeccCC---CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 52 -RTIYDISWCHLTDLIATACGDDAIRIFKENPE---AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 52 -~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
..+.+++|+|+|++++.++. +.|++||+..+ . ... ...+...+..++|+|+ ++.|++++ ++.
T Consensus 108 ~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~----------~~~-l~~~~~~~~~~~~SPD-G~~la~~~-~~~ 173 (741)
T 2ecf_A 108 MTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA----------VRQ-LTHGEGFATDAKLSPK-GGFVSFIR-GRN 173 (741)
T ss_dssp CEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS----------CCB-CCCSSSCEEEEEECTT-SSEEEEEE-TTE
T ss_pred ccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce----------EEE-cccCCcccccccCCCC-CCEEEEEe-CCc
Confidence 23788999999999888876 89999999876 3 222 2356678999999999 99998887 468
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+.+++
T Consensus 174 i~~~d~~~g~ 183 (741)
T 2ecf_A 174 LWVIDLASGR 183 (741)
T ss_dssp EEEEETTTTE
T ss_pred EEEEecCCCC
Confidence 9999987653
No 134
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.53 E-value=3.9e-14 Score=95.32 Aligned_cols=104 Identities=9% Similarity=0.003 Sum_probs=82.8
Q ss_pred CccCCCeEEEeeCC----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--c
Q psy14817 1 MIQTGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~ 74 (138)
|||||++|++++.| +.|++||+.... ...+.. |...+..++|+|+|+.++++..++ .
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~----------------~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----------------LRVFDS-GEGSFSSASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCC----------------CEEECC-SSCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCC----------------ceEeec-CCCccccceECCCCCEEEEccCCCeeE
Confidence 58999999988877 789999975432 234555 677889999999999999888888 8
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEE--------EccCCCCEEEEEeCCCcEEEEEc
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
|++||+..+. .. ....+...+..+. |+|+ +.++++++.|+.+++|++
T Consensus 220 i~~~d~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGS----------VE-DLELPSKDFSSYRPTAITWLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTTCC----------EE-ECCCSCSHHHHHCCSEEEEEEECTT-SCEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCc----------EE-EccCCCcChhhhhhccccceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 9999998765 22 3345555666666 9999 788999999999999997
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.50 E-value=4.1e-13 Score=84.36 Aligned_cols=113 Identities=10% Similarity=0.034 Sum_probs=78.8
Q ss_pred CccCCCeEEEeeCC-CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLATCSDD-ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|+|+|++|++++.+ +.|.+|++... ....+.+..+.. +. .+..++|+|++.+++.++ .++.|.+|
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPD-----------DGALTFAAESAL-PG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTT-----------TCCEEEEEEEEC-SS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCC-----------CCceeecccccc-CC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 58999988888876 99999998521 112234445544 33 788999999999776555 48889999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~ 135 (138)
++..+. . .. ..... .....+..++|+|+ ++.+++++ .++.|.+||+..
T Consensus 112 d~~~~~---~---~~-~~~~~-~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 112 RLEDGL---P---VG-VVDVV-EGLDGCHSANISPD-NRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EEETTE---E---EE-EEEEE-CCCTTBCCCEECTT-SSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCc---c---cc-ccccc-cCCCCceEEEECCC-CCEEEEecCCCCEEEEEEecC
Confidence 995211 0 00 11111 23346889999999 88777776 899999999976
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.50 E-value=1.5e-13 Score=94.32 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=81.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecCCCeEEEeeCC-----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIATACGD----- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~~~d----- 72 (138)
|||+|+++++ +.|+.|++||...... ...+.. |.. .+.+++|+|+|++++.++.+
T Consensus 24 ~spdg~~~~~-~~dg~i~~~d~~~g~~---------------~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 24 WISDTEFIYR-EQKGTVRLWNVETNTS---------------TVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp BSSSSCBCCC-CSSSCEEEBCGGGCCC---------------EEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred EcCCCcEEEE-eCCCCEEEEECCCCcE---------------EEEecc-ccccccccceEEECCCCCEEEEEecCcccee
Confidence 7899998876 7899999999865432 333443 443 48999999999999888764
Q ss_pred ----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+.+||+..+.. ........+...+..++|+|+ ++.|++++. +.|++||+.+++
T Consensus 87 ~~~~~~i~~~d~~~~~~--------~~l~~~~~~~~~~~~~~~SPd-G~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP--------QSLDPPEVSNAKLQYAGWGPK-GQQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp SCCCSEEEEEESSSCCC--------EECCCTTCCSCCCSBCCBCSS-TTCEEEEET-TEEEEESSSSSC
T ss_pred ecceeeEEEEECCCCce--------EeccCCccccccccccEECCC-CCEEEEEEC-CeEEEEECCCCc
Confidence 6788999987650 011111234455889999999 999988886 789999987754
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=3.5e-13 Score=92.52 Aligned_cols=99 Identities=7% Similarity=-0.052 Sum_probs=69.6
Q ss_pred CccCCCeEEEeeCC---------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|++++.+ +.+.+||+..... +.+..... |...+..++|+|+|+.++.++.
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-------------QSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-------------EECCCTTC-CSCCCSBCCBCSSTTCEEEEET
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCce-------------EeccCCcc-ccccccccEECCCCCEEEEEEC
Confidence 68999999999875 7788999754322 12222223 4455888999999999888876
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeeccccc------------------ceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ------------------DVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~l~~~~~d 125 (138)
+.|++|++..+. .......+.. .+..+.|+|+ ++.|++++.|
T Consensus 134 -~~i~~~~~~~g~----------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~ 193 (723)
T 1xfd_A 134 -NNIYYCAHVGKQ----------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAIN 193 (723)
T ss_dssp -TEEEEESSSSSC----------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEE
T ss_pred -CeEEEEECCCCc----------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCC-CCEEEEEEEC
Confidence 689999998765 2222222222 2378999999 9999888755
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.48 E-value=1e-12 Score=90.53 Aligned_cols=99 Identities=11% Similarity=0.073 Sum_probs=71.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||||++|++++. +.|.+||+.....+ ....+.. +...+..++|+|+|++++.++. +.|++|++
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~-------------~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~ 179 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKA-------------AVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDL 179 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTT-------------SCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEET
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcc-------------eEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEec
Confidence 6899999999987 99999998654100 0223444 5678999999999999888874 58999999
Q ss_pred cCCCCCCceeeeeeeeeeeccccc----------------ceeEEEEccCCCCEEEEEeCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQ----------------DVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
..+. .......+.. .+..+.|+|+ ++.|++++.|+
T Consensus 180 ~~g~----------~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~ 230 (741)
T 2ecf_A 180 ASGR----------QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDE 230 (741)
T ss_dssp TTTE----------EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEEC
T ss_pred CCCC----------EEEeccCCccceeccccceeeeeccccccceEECCC-CCEEEEEEEcC
Confidence 8654 2222212221 2578999999 99998887765
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=1.3e-12 Score=80.37 Aligned_cols=107 Identities=13% Similarity=0.046 Sum_probs=73.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccC-CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee--CCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~d~~i~i 77 (138)
|+|+|++|++++ ++.|++||+.. ... ......++...+.+++|+|++.+++.++ .++...+
T Consensus 49 ~spdg~~l~~~~-~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 49 WSPDGKYLLLNS-EGLLYRLSLAGDPSP---------------EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp ECTTSSEEEEEE-TTEEEEEESSSCCSC---------------EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred ECCCCCEEEEEc-CCeEEEEeCCCCCCc---------------eEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 689999999987 78999999865 322 2223332346788999999999998888 4456666
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
|.+...... ... . .....+..++|+|+ ++.++ +++.|+.+++|+++
T Consensus 113 ~~~~~~~~~--------~~~-~-~~~~~~~~~~~spd-g~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 113 YLLPSTGGT--------PRL-M-TKNLPSYWHGWSPD-GKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp EEEETTCCC--------CEE-C-CSSSSEEEEEECTT-SSEEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCc--------eEE-e-ecCCCccceEECCC-CCEEEEEECCCCceEEEEEE
Confidence 665432200 111 1 22234888999999 77665 78889999999864
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.47 E-value=5.7e-12 Score=84.55 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=83.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec----CCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----LTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~s~~-~d~~i 75 (138)
|+|+|+++++++.|++|++||+.. ...+++..+.. ...+..++|+| +++++++++ .+++|
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~-------------~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWA-------------KEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTS-------------SSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred ECCCCCEEEEECCCCeEEEEECcC-------------CCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 689999999999999999999721 12245666654 45678999999 999888887 48999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeec---------cc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHR---------AH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+||....+ ....... .| ...+..+.++|+...++++...++.|.+||+.+.
T Consensus 251 ~v~D~~t~~---------~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 251 AIMDGETLE---------PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp EEEETTTCC---------EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred EEEeccccc---------cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 999987655 1111110 02 2378899999984567778888999999998764
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.45 E-value=2e-12 Score=92.22 Aligned_cols=108 Identities=6% Similarity=-0.028 Sum_probs=85.3
Q ss_pred CccCCCeEEEeeCCCcEE-EeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVK-IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+ +|+.|+.++.+..+. +|++.... ...+.. |...+..++|+|++++++.++.++.|++||
T Consensus 345 ~s-dg~~l~~~s~~~~l~~~~d~~~~~----------------~~~l~~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 345 GD-TKVAFIHGTREGDFLGIYDYRTGK----------------AEKFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp SS-SEEEEEEEETTEEEEEEEETTTCC----------------EEECCC-CCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred Ec-CCCeEEEEECCCceEEEEECCCCC----------------ceEecC-CccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 56 888899998887787 88864321 233444 678899999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC----------cEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG----------DVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----------~v~~wd~~~~~ 137 (138)
+..+. .......|...+..++|+|+ +++|++++.++ .|++||+.+++
T Consensus 407 ~~tg~----------~~~~~~~~~~~v~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 407 LETGK----------PTVIERSREAMITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TTTCC----------EEEEEECSSSCCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCCc----------eEEeccCCCCCccceEECCC-CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 98766 33344467788999999999 99888887654 89999987653
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.43 E-value=2.9e-11 Score=75.95 Aligned_cols=119 Identities=5% Similarity=0.045 Sum_probs=76.3
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeE--EecCCCccCeEEEEEecCCCeEEE-eeCCCcEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~ 76 (138)
|+|+|+++++++ .++.|.+|++..... ...+. .+.......+.++.|+|++.+++. +..++.+.
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSDDGH------------LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSC------------EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEEecCCCc------------eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 589999888777 899999999854221 11121 222213457889999999996654 44788999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
+|++....+... ........... ....+..++|+|+ +++++ +...++.|.+||+.
T Consensus 204 ~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~i~~s~d-g~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 204 VWELKDPHGNIE--CVQTLDMMPENFSDTRWAADIHITPD-GRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEESSCTTSCCE--EEEEEECSCTTCCSCCCEEEEEECTT-SSEEEEEETTTTEEEEEEEC
T ss_pred EEEecCCCCcEE--EEeeccccCccccccCCccceEECCC-CCEEEEEecCCCEEEEEEEc
Confidence 999964321111 01111111111 1345678999999 77666 55579999999997
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=1.8e-11 Score=77.41 Aligned_cols=114 Identities=7% Similarity=0.095 Sum_probs=74.4
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-----ccCeEEEEEecCCCeE-EEeeCCC
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLI-ATACGDD 73 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~-~s~~~d~ 73 (138)
|+|+|++++ ++..++.|.+|++..... ....+..+.... ...+..++|+|+|+++ ++...++
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTG-----------AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTT-----------EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCC-----------ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 689999555 466789999999754211 112222322201 1358889999999966 5666789
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEc
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQI 133 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~ 133 (138)
.|.+|++.... . .. .......+...+..++|+|+ +++|++++. ++.+.+|++
T Consensus 263 ~v~v~~~~~~g---~---~~-~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 263 TLAVFAVTADG---H---LT-LIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEEEECGGG---C---EE-EEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEE
T ss_pred EEEEEEECCCC---c---EE-EeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEE
Confidence 99999987321 0 01 11112234556889999999 888877775 489999954
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.41 E-value=3.8e-12 Score=87.32 Aligned_cols=122 Identities=11% Similarity=0.076 Sum_probs=78.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccC-----CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYK-----PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----- 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----- 70 (138)
|||+|++|+.+ .|+.|++|++.. ........... .....-...... +...+.++.|+|+|++|+.++
T Consensus 128 ~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~e-e~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 128 FSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT-ETLVYGQAVHQR-EFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp ECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB-TTEEESSCCGGG-CTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC-CCeEcccchhhh-hcCCCceEEECCCCCEEEEEEECCCC
Confidence 68999999985 679999999865 22210000000 000000000000 122358899999999888887
Q ss_pred ----------------------------CCCcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEE
Q psy14817 71 ----------------------------GDDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 71 ----------------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~ 120 (138)
.+..|.+||+..+. ..... ..+...+..++|+|+ ++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~spd-g~~l~ 273 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK----------TVYLQTGEPKEKFLTNLSWSPD-ENILY 273 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE----------EEECCCCSCTTCEEEEEEECTT-SSEEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc----------eEeeccCCCCceeEeeEEEECC-CCEEE
Confidence 34579999987654 11111 245677899999999 99888
Q ss_pred EEeCCC-----cEEEEEcCCC
Q psy14817 121 SCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 121 ~~~~d~-----~v~~wd~~~~ 136 (138)
+++.++ .|.+||+.++
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTC
T ss_pred EEEeCCCCCeeEEEEEECCCC
Confidence 887775 8999999876
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.41 E-value=3e-12 Score=91.39 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=82.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------- 73 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~------- 73 (138)
|||+|++|++++.++.|++||+... +....... |...+..++|+|+|++++.++.++
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg---------------~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETG---------------KPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ECCCCCEEEEECCCCeEEEEECCCC---------------ceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCC
Confidence 6899999999999999999997543 22333335 778889999999999888776543
Q ss_pred ---cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 74 ---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 74 ---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.|++||+..+. . .....+...+..+.|+|+ ++.|++++.++...+|+..
T Consensus 450 ~~~~i~l~d~~~g~----------~-~~l~~~~~~~~~~~~spd-G~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK----------I-FAATTENSHDYAPAFDAD-SKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEEEETTTTE----------E-EECSCSSSBEEEEEECTT-SCEEEEEESCCCCCEECSS
T ss_pred CCCeEEEEECCCCc----------E-EEeeCCCcccCCceEcCC-CCEEEEEecccCCcCcchh
Confidence 89999998643 2 223356677888999999 9999999988887777654
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=6.9e-12 Score=79.02 Aligned_cols=111 Identities=3% Similarity=-0.137 Sum_probs=79.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
++++++++++++.++.|.+||.... +.+..+.......+..++|+|++..+ ++...++.|.+||
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d 71 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASD---------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGID 71 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTT---------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCC---------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEe
Confidence 4678889999999999999996432 34555544122257789999999854 5556788999999
Q ss_pred ccCCCCCCceeeeeeeeeeeccc-----ccceeEEEEccCCCCEEEEEeCC------------CcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAH-----NQDVNCVAWNPVVPGMLASCSDD------------GDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d------------~~v~~wd~~~~ 136 (138)
+..+. ........+ ...+..++|+|+ ++++++++.+ +.|.+||+.++
T Consensus 72 ~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 72 LDTCK---------NTFHANLSSVPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp TTTTE---------EEEEEESCCSTTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred CCCCc---------EEEEEEcccccccccccccceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 98654 111111111 234788999999 9888888765 89999998763
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.40 E-value=1.5e-11 Score=77.62 Aligned_cols=111 Identities=5% Similarity=0.028 Sum_probs=80.3
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++++.++ .++.|.+||.... +.+..+.. +...+.++.|+|++..++.++.++.|.+|
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~~---------------~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~ 211 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGNI---------------KLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITI 211 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTTT---------------EEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEE
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCCC---------------ceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEE
Confidence 478888777665 5889999996432 44555553 44567889999999998888889999999
Q ss_pred eccCCCCCCceeeeeeeeeee---cccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH---RAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~~ 137 (138)
|+..+. ...... ..+...+..++|+|+ ++.++.++ .++.|.+||+.+++
T Consensus 212 d~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 212 DTADNK---------ILSRKKLLDDGKEHFFINISLDTA-RQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp ETTTTE---------EEEEEECCCSSSCCCEEEEEEETT-TTEEEEEESSSSEEEEEETTTCC
T ss_pred ECCCCe---------EEEEEEcCCCCCCcccceEEECCC-CCEEEEEeCCCCEEEEEECCCCc
Confidence 988654 111111 124556788999999 77665555 45999999998764
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=90.21 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=76.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecCCCeEEEeeC------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIATACG------ 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~~~------ 71 (138)
|+|+|++++++ .|+.|++||+.... +...+.. +.. .+.+++|+|+|++++.++.
T Consensus 23 ~s~dg~~~~~~-~d~~i~~~~~~~g~---------------~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~ 85 (719)
T 1z68_A 23 WISGQEYLHQS-ADNNIVLYNIETGQ---------------SYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWR 85 (719)
T ss_dssp ESSSSEEEEEC-TTSCEEEEESSSCC---------------EEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSS
T ss_pred ECCCCeEEEEc-CCCCEEEEEcCCCc---------------EEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEE
Confidence 68899766655 69999999975432 2333332 322 4889999999998888766
Q ss_pred ---CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 72 ---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 72 ---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.|++||+..+. .... ......+..++|+|+ ++.|+++. |+.|++|++.+++
T Consensus 86 ~s~~~~i~~~d~~~g~----------~~~~-~~l~~~~~~~~~SPD-G~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 86 YSYTATYYIYDLSNGE----------FVRG-NELPRPIQYLCWSPV-GSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp SCEEEEEEEEETTTTE----------ECCS-SCCCSSBCCEEECSS-TTCEEEEE-TTEEEEESSTTSC
T ss_pred eecceEEEEEECCCCc----------cccc-eecCcccccceECCC-CCEEEEEE-CCeEEEEeCCCCC
Confidence 6899999998765 2000 011246888999999 99998886 7899999987654
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.40 E-value=4.5e-12 Score=80.17 Aligned_cols=116 Identities=9% Similarity=0.119 Sum_probs=75.6
Q ss_pred CccCCCeEEEeeC--CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEE
Q psy14817 1 MIQTGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i 77 (138)
|+|+|++++++.. ++.|.+|++... ..+.+..+.. +...+..++|+|+++++++++ .++.+.+
T Consensus 47 ~spdg~l~~~~~~~~~~~v~~~~~~~g-------------~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 47 LSAKDCLYSVDKEDDEGGIAAWQIDGQ-------------TAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp ECTTCEEEEEEEETTEEEEEEEEEETT-------------EEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred EccCCeEEEEEecCCCceEEEEEecCC-------------cEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 5889994444432 689999998322 1233444444 466788999999999777777 6789999
Q ss_pred EeccCCCCCCceeeeeeeeeee-----cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH-----RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|++.... ............ ......+..++|+|+ ++++++...++.|.+|++.
T Consensus 113 ~~~~~~g---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 113 MKIAADG---ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEECTTS---CEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEEC
T ss_pred EEeCCCC---CeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEEC
Confidence 9996422 111110000000 012235888999999 7766666678899999987
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.39 E-value=1.9e-11 Score=77.20 Aligned_cols=111 Identities=9% Similarity=0.006 Sum_probs=78.8
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc--------CeEEEEEecCCCeEEEee-
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--------TIYDISWCHLTDLIATAC- 70 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~v~~~~~~~~~~s~~- 70 (138)
|+|+|+ .+++...++.|.+||..... .+..+...... .+.++.|+|++..++.+.
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGE---------------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCC---------------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCe---------------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 478888 45566668999999975432 23333331111 268899999999666654
Q ss_pred -CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|.+||..... .......+...+..+.|+|+ ++.+++++.++.|.+||+.+++
T Consensus 161 ~~~~~i~~~d~~~~~----------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 161 GKESVIWVVDGGNIK----------LKTAIQNTGKMSTGLALDSE-GKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp SSSCEEEEEETTTTE----------EEEEECCCCTTCCCCEEETT-TTEEEEECTTSEEEEEETTTTE
T ss_pred CCCceEEEEcCCCCc----------eEEEecCCCCccceEEECCC-CCEEEEEcCCCeEEEEECCCCe
Confidence 47889999998664 22222224456788999999 9999999999999999987764
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=2.4e-11 Score=77.30 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=74.5
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC--CCccCeEEEEEecCCCeEEEeeC--CCcE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTDLIATACG--DDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~--d~~i 75 (138)
|+|+|+++++++ .++.|.+|++.... ...+..+.. .+......++|+|++++++.+.. ++.|
T Consensus 218 ~spdg~~l~v~~~~~~~v~v~~~~~g~-------------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 218 FNSDGKFAYLINEIGGTVIAFRYADGM-------------LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp ECTTSSEEEEEETTTCEEEEEEEETTE-------------EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred EcCCCCEEEEEcCCCCeEEEEEecCCc-------------eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 689999877666 68999999985221 122222221 13345789999999997766555 4889
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~ 134 (138)
.+|++....+. . ....... . ...+..++|+|+ +++|++++ .++.|.+|.+.
T Consensus 285 ~v~~~~~~~g~---~--~~~~~~~-~-g~~~~~~~~spd-g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 285 AIFKVDETNGT---L--TKVGYQL-T-GIHPRNFIITPN-GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEECTTTCC---E--EEEEEEE-C-SSCCCEEEECTT-SCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEcCCCCc---E--EEeeEec-C-CCCCceEEECCC-CCEEEEEECCCCCEEEEEEE
Confidence 99999732210 0 0111111 2 456789999999 88887777 67899996553
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.37 E-value=2.9e-11 Score=75.86 Aligned_cols=109 Identities=5% Similarity=-0.031 Sum_probs=74.5
Q ss_pred ccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEEe
Q psy14817 2 IQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFK 79 (138)
Q Consensus 2 s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~~ 79 (138)
.+++ ..+++++.++.|.+||.... +.+..+.. +...+ .++|+|++.+++.++ .++.|.+||
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTL---------------EILNQITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEeCccc---------------ceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEE
Confidence 4444 45888999999999997443 22444444 44556 999999999655554 488999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC---cEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~~wd~~~~~ 137 (138)
+..+. ........+..+..+++|+|+ +++++++..++ .|.+||+.+++
T Consensus 69 ~~~~~---------~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 69 TQLEP---------PKVVAIQEGQSSMADVDITPD-DQFAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp CSSSS---------CEEEEEEECSSCCCCEEECTT-SSEEEECCCSSSSCEEEEEETTTTE
T ss_pred CCCCc---------eeEEecccCCCCccceEECCC-CCEEEEecCCCCcccEEEEECCCCC
Confidence 98765 112222234445445999999 88888555553 89999998764
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.36 E-value=5e-12 Score=86.91 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=66.8
Q ss_pred CccCCCeEEEeeC---------CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSD---------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~---------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|+.++. |+.|++||+..... +.... ....+..++|+|+|+.|+.+.
T Consensus 67 ~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---------------~~~~~--l~~~~~~~~~SPDG~~la~~~- 128 (719)
T 1z68_A 67 LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---------------VRGNE--LPRPIQYLCWSPVGSKLAYVY- 128 (719)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---------------CCSSC--CCSSBCCEEECSSTTCEEEEE-
T ss_pred ECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---------------cccee--cCcccccceECCCCCEEEEEE-
Confidence 6899999999876 79999999754311 10001 123578899999999888875
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeee-ccccc-----------------ceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQ-----------------DVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------~v~~~~~~~~~~~~l~~~~~d 125 (138)
++.|++|++..+. ..... .++.. ....+.|+|+ ++.|++++.|
T Consensus 129 ~~~i~~~~~~~g~----------~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d 189 (719)
T 1z68_A 129 QNNIYLKQRPGDP----------PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFN 189 (719)
T ss_dssp TTEEEEESSTTSC----------CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEE
T ss_pred CCeEEEEeCCCCC----------cEEEecCCCcCCeEcccccceeeeecccCcccEEECCC-CCEEEEEEEC
Confidence 6799999997654 11111 11211 1258999999 9999988765
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=1.4e-10 Score=72.76 Aligned_cols=113 Identities=9% Similarity=0.046 Sum_probs=76.7
Q ss_pred CccCCCeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe-EEEeeCCCc-E
Q psy14817 1 MIQTGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACGDDA-I 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~s~~~d~~-i 75 (138)
|+|+|++++++..++ .|.+||+... +.+..+.. .....+++|+|++++ +++...++. +
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~---------------~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKN---------------KFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTT---------------EEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCC---------------CeEEEEEC--CCCccceEECCCCCEEEEEecCCCceE
Confidence 589999999665553 8999997432 33444443 345789999999984 455566688 9
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
.+|++.... ...... .... .....+..++|+|+ ++++ +++..++.|.+||+.+++
T Consensus 154 ~~~~~~~~g---~~~~~~--~~~~-~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 154 RRFKIDADG---VLFDTG--QEFI-SGGTRPFNITFTPD-GNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEEEECTTC---CEEEEE--EEEE-CSSSSEEEEEECTT-SSEEEEEETTTTEEEEEECSSTT
T ss_pred EEEEECCCC---cEeecC--Cccc-cCCCCccceEECCC-CCEEEEEeCCCCeEEEEECCCCc
Confidence 999998533 111111 1111 33456789999999 8755 555568999999998765
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.32 E-value=1.8e-11 Score=84.68 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=78.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc-----CeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-----TIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|+|+|++++++ |+.|++||+.... +...+.. |.. ....+.|+|+|++++.++.+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGN---------------SSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCC---------------EEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCc---------------eEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeee
Confidence 68999999986 9999999975432 2333444 322 23458899999988888775
Q ss_pred ------CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+.+||+..+. ... ...+...+...+|+|+ ++.|+.+. |+.|.+|++.+++
T Consensus 86 ~r~~~~~~~~~~d~~~~~----------~~~-l~~~~~~~~~~~~SPd-G~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQ----------LIT-EERIPNNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp SSSCEEEEEEEEETTTTE----------ECC-SSCCCTTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSC
T ss_pred EEEccceEEEEEECCCCc----------EEE-cccCCCcceeeEECCC-CCEEEEEE-CCeEEEEECCCCc
Confidence 556799998765 222 2356678999999999 99988884 7899999987654
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.32 E-value=3.3e-11 Score=81.17 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=75.1
Q ss_pred CccCCC--eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----Cc
Q psy14817 1 MIQTGS--RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DA 74 (138)
Q Consensus 1 ~s~~~~--~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----~~ 74 (138)
|+|+|+ .+++++.|+. .+||+.... . ..+.. +.. .+++|+|+|++++.++.+ ..
T Consensus 117 ~s~dg~~~~~~s~~~~~~-~l~d~~~g~---------------~-~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 117 GVDTGEAVVFTGATEDRV-ALYALDGGG---------------L-RELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp EEECSSCEEEEEECSSCE-EEEEEETTE---------------E-EEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred eCCCCCeEEEEecCCCCc-eEEEccCCc---------------E-EEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 467775 4555555554 499975431 1 12222 222 789999999999977766 67
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC--cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG--DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~v~~wd~~~~~ 137 (138)
|++||+..+. .. ....+...+..++|+|+ ++.|+++..++ .|++||+.+++
T Consensus 177 i~~~d~~~g~----------~~-~l~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 177 LFTSNLSSGG----------LR-VFDSGEGSFSSASISPG-MKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEETTTCC----------CE-EECCSSCEEEEEEECTT-SCEEEEEECSSCEEEEEECTTTCC
T ss_pred EEEEcCCCCC----------ce-EeecCCCccccceECCC-CCEEEEccCCCeeEEEEEcCCCCc
Confidence 9999988765 22 23467778899999999 99999888888 89999988764
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.31 E-value=3.4e-11 Score=75.44 Aligned_cols=108 Identities=7% Similarity=0.091 Sum_probs=75.2
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC----ccCeEEEEEecCCCeEEEee-----
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH----GRTIYDISWCHLTDLIATAC----- 70 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~s~~----- 70 (138)
|+|+|+++ ++++.++.|.+||+... +.+..+...+ ...+..++|+|++.+++.+.
T Consensus 41 ~s~dg~~l~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 105 (337)
T 1pby_B 41 VAPGGRIAYATVNKSESLVKIDLVTG---------------ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL 105 (337)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTC---------------CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCCC---------------CeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc
Confidence 57899754 66677899999997443 2233333211 22567899999999877775
Q ss_pred -------CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|.+||+..+. ..... .....+..+.|+|+ +++++++ ++.|.+||+.+++
T Consensus 106 ~~~~~~~~~~~i~v~d~~~~~----------~~~~~-~~~~~~~~~~~s~d-g~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 106 ELTHFEVQPTRVALYDAETLS----------RRKAF-EAPRQITMLAWARD-GSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp CSSCEEECCCEEEEEETTTTE----------EEEEE-ECCSSCCCEEECTT-SSCEEEE--SSSEEEEETTTTE
T ss_pred ccccccccCceEEEEECCCCc----------EEEEE-eCCCCcceeEECCC-CCEEEEe--CCeEEEEECCCCc
Confidence 57899999997654 22222 22346788999999 8877777 6889999998754
No 158
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.29 E-value=2.4e-11 Score=82.81 Aligned_cols=117 Identities=9% Similarity=0.065 Sum_probs=76.9
Q ss_pred CccCCCeEEEeeCC----------CcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEe
Q psy14817 1 MIQTGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATA 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~ 69 (138)
|||||+.|+.++.| ..|.+|++........ . + ...+. . +...+..++|+|+|++|+.+
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------~--~-~~~l~~~-~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR-------S--A-VRELSDD-AHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG-------G--G-SEESSCS-CSSEECCCEECTTSSEEEEE
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC-------C--c-eeEEEec-CCCcccCceECCCCCEEEEE
Confidence 68999999999887 5899999754210000 0 0 12333 3 44567789999999988776
Q ss_pred eCC--------CcEEEEecc-CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC--cEEEEEcCCC
Q psy14817 70 CGD--------DAIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG--DVKLWQIKLE 136 (138)
Q Consensus 70 ~~d--------~~i~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~v~~wd~~~~ 136 (138)
+.+ ..|++|++. .+. ......+...+...+..+.|+|+ ++++++++.++ .|.+||+.++
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~-------~~~~~~l~~~~~~~~~~~~~spd-g~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGR-------FADTRTLLGGPEEAIAQAEWAPD-GSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSC-------EEEEEEEEEETTBCEEEEEECTT-SCEEEEECTTSSCEEEEECTTTC
T ss_pred ECCCCCCCCCCcEEEEEEECCCCc-------ccccEEeCCCCCceEcceEECCC-CeEEEEECCCCCeEEEEEECCCC
Confidence 644 369999987 341 00022233345678899999999 78888888888 5555555443
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.28 E-value=9.4e-10 Score=69.96 Aligned_cols=122 Identities=7% Similarity=0.036 Sum_probs=75.1
Q ss_pred CccCCCeEEE-eeCCCcEEEeeccCCCCCCCccCCCCCCceEEe---EEecCCCccCeEEEEEecCCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---CTLSGHHGRTIYDISWCHLTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t-~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i 75 (138)
|+|+|++++. ...++.|.+|++........ ....... ..........+..++|+|++++++.++ .++.|
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADN------KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTT------CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCccc------ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 5899986554 45589999999854321000 0000111 111121355678999999999776666 68899
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC--CCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~ 134 (138)
.+|++..+. ............+...+..++|+|+ +++|++++. ++.|.+|++.
T Consensus 236 ~v~~~~~g~-----~~~~~~~~~~~~~~~~~~~i~~spd-g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYADGM-----LDEIQTVAADTVNAQGSGDIHLSPD-GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTE-----EEEEEEEESCSSCCCCEEEEEECTT-SSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEecCCc-----eEEeEEEecCCCCCCCcccEEECCC-CCEEEEECCCCCCEEEEEEEc
Confidence 999998432 1000011111223345689999999 888866665 4889999985
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=7e-10 Score=70.87 Aligned_cols=115 Identities=12% Similarity=0.085 Sum_probs=75.1
Q ss_pred CccCCCe--EEEee-------------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe
Q psy14817 1 MIQTGSR--LATCS-------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 65 (138)
Q Consensus 1 ~s~~~~~--l~t~s-------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 65 (138)
|+|+|++ +++++ .++.+.+|++..... ....+..+...+...+.+++|+|+|++
T Consensus 90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~spdG~~ 158 (365)
T 1jof_A 90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK-----------LEKNVQNYEYQENTGIHGMVFDPTETY 158 (365)
T ss_dssp TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC-----------EEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc-----------CcceEeeEEeCCCCcceEEEECCCCCE
Confidence 6899984 55654 689999999853211 011122221113567899999999997
Q ss_pred EEEee-CCCcEEEEecc-CCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcC
Q psy14817 66 IATAC-GDDAIRIFKEN-PEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIK 134 (138)
Q Consensus 66 ~~s~~-~d~~i~i~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~ 134 (138)
++++. .++.|.+|++. .+. .. ...... ..+...+..++|+|+ ++++++++. ++.|.+|++.
T Consensus 159 l~~~~~~~~~v~~~~~~~~g~-----~~--~~~~~~~~~~g~~p~~~~~spd-g~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 159 LYSADLTANKLWTHRKLASGE-----VE--LVGSVDAPDPGDHPRWVAMHPT-GNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEETTTTEEEEEEECTTSC-----EE--EEEEEECSSTTCCEEEEEECTT-SSEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEEECCCCC-----EE--EeeeEecCCCCCCCCEeEECCC-CCEEEEEECCCCeEEEEEEe
Confidence 77665 36789999997 333 00 011111 113466899999999 888877765 7889999765
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.27 E-value=2.1e-10 Score=71.86 Aligned_cols=107 Identities=9% Similarity=-0.040 Sum_probs=75.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc-CeEEEEEecCCCe-EEEeeCCCcEEEEeccCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-TIYDISWCHLTDL-IATACGDDAIRIFKENPE 83 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~-~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++.++.|.+||.... +.+..+...+.. .+..++|+|++.. ++++..++.|.+||+..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM---------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT---------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEcCCCCeEEEEECCCC---------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC
Confidence 57899999999999996432 345555431221 4788999999975 456666789999999876
Q ss_pred CCCCceeeeeeeeeeecc----cccceeEEEEccCCCCEEEEEe------------CCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRA----HNQDVNCVAWNPVVPGMLASCS------------DDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~------------~d~~v~~wd~~~~~ 137 (138)
. ........ +...+..++|+|+ ++.+++++ .++.|.+||+.+++
T Consensus 67 ~---------~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 67 E---------TLGRIDLSTPEERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp C---------EEEEEECCBTTEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred C---------eEeeEEcCCcccccccccceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCc
Confidence 5 11111111 1236778999999 88888775 57999999997653
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.24 E-value=6.8e-10 Score=70.91 Aligned_cols=120 Identities=8% Similarity=0.004 Sum_probs=74.0
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeC-CCcEEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG-DDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~-d~~i~i 77 (138)
|+|+|++++++. .++.|++|++.... ....+..+... +...+..++|+|++++++.++. ++.+.+
T Consensus 152 ~spdG~~l~~~~~~~~~v~~~~~~~~g------------~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 152 FDPTETYLYSADLTANKLWTHRKLASG------------EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTS------------CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEcCCCCEEEEEEECCCC------------CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 589999887765 46899999985211 01223333311 3456899999999998777664 678999
Q ss_pred EeccCCCCCCceeeeeeeeeee---ccccc------ceeEEE-EccCCCCEEEEEeCCC------cEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH---RAHNQ------DVNCVA-WNPVVPGMLASCSDDG------DVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~v~~~~-~~~~~~~~l~~~~~d~------~v~~wd~~ 134 (138)
|++....+... .......... .++.. .+..++ |+|+ +++|++++.+. .|.+|++.
T Consensus 220 ~~~~~~~g~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd-G~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 220 YVIDPATHMPV-YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS-GKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEECTTTCCEE-EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT-SSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEEeCCCCcEE-EccceEEcCCCCcCCcccccccccccccEEEECCC-CCEEEEECCCCCCCCCCeEEEEEEC
Confidence 98764221100 0000011111 11222 578899 9999 88877665432 79999985
No 163
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=3.8e-10 Score=72.72 Aligned_cols=97 Identities=7% Similarity=0.088 Sum_probs=73.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|+++ .++.|++||+..... ...... +...+..+.+.+. .++.+..||.|.+|++...
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~---------------~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSE---------------FRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTC---------------EEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEE-cCCcEEEEEchhhhc---------------cCccce-eecceeeEEecCC--CEEEEECCCCEEEEEccCC
Confidence 67888888 889999999865432 112233 4556777776643 3888899999999999866
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. .. .+...|++++|+|. + ++.|..||++++|+....
T Consensus 157 ~----------~~----~~~~~Vs~v~WSpk-G--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 157 S----------TK----QLAQNVTSFDVTNS-Q--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp C----------EE----EEEESEEEEEECSS-E--EEEEETTSCEEEEEEETT
T ss_pred c----------cc----cccCCceEEEEcCC-c--eEEEEcCCcEEEEcCCCc
Confidence 5 21 13458999999998 6 778999999999987654
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.20 E-value=2.3e-10 Score=72.05 Aligned_cols=110 Identities=9% Similarity=0.011 Sum_probs=72.6
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-----ccCeEEEEEecCCCeEEEeeCC--
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLIATACGD-- 72 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~~s~~~d-- 72 (138)
|+|+|+++ +++..++.|.+||+... +.+..+...+ ...+..++|+|+++++++++.+
T Consensus 50 ~s~dg~~~~v~~~~~~~i~~~d~~t~---------------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 114 (349)
T 1jmx_B 50 MAPDNRTAYVLNNHYGDIYGIDLDTC---------------KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQ 114 (349)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCcEEEEeCCCC---------------cEEEEEEcccccccccccccceEECCCCCEEEEEccccc
Confidence 57889854 56667899999997432 2333333212 2336789999999988887755
Q ss_pred ----------CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ----------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|.+||+..+.... ..... .+...+.+++|+|+ +. ++.++ +.|.+||+.+++
T Consensus 115 ~~~~~~~~~~~~i~~~d~~~~~~~~-------~~~~~-~~~~~~~~~~~s~d-g~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 115 RLNDHYVVKPPRLEVFSTADGLEAK-------PVRTF-PMPRQVYLMRAADD-GS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp ECSSCEEECCCEEEEEEGGGGGGBC-------CSEEE-ECCSSCCCEEECTT-SC-EEEES--SSEEEECTTTCC
T ss_pred ccccccccCCCeEEEEECCCccccc-------eeeec-cCCCcccceeECCC-Cc-EEEcc--CcEEEEeCCCCc
Confidence 899999998643000 11111 23346888999999 77 54544 349999987764
No 165
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.19 E-value=9.2e-10 Score=75.64 Aligned_cols=108 Identities=5% Similarity=0.005 Sum_probs=74.5
Q ss_pred Ccc--CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE-EEEecCCCeEEE-eeCCC---
Q psy14817 1 MIQ--TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIAT-ACGDD--- 73 (138)
Q Consensus 1 ~s~--~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~s-~~~d~--- 73 (138)
|+| +|+++++++.|+.++||.+.... ..+..+.. +...+.. +.|+|++..++. +..++
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~--------------~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTG--------------RLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTS--------------CEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCC--------------CEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 578 99999999999999999975211 23455555 5667776 799999986654 44444
Q ss_pred -cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC----CcEEEEEcCCC
Q psy14817 74 -AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD----GDVKLWQIKLE 136 (138)
Q Consensus 74 -~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~ 136 (138)
.|..|++..+. .... .+...+..++|+|+ +++++..+.+ +.+.+||+.++
T Consensus 382 ~~l~~~d~~~~~----------~~~l--~~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 382 RHFYCIDIKGGK----------TKDL--TPESGMHRTQLSPD-GSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp BEEEEEETTCCC----------CEES--CCSSSEEEEEECTT-SSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEEEEcCCCC----------ceec--cCCCceEEEEECCC-CCEEEEEecCCCCCcEEEEEECCCC
Confidence 45555655432 1111 24567889999999 8877665443 45999998765
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.16 E-value=4.4e-10 Score=77.84 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=67.0
Q ss_pred CccCCCeEEEeeCC---------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|+.++.+ +.+.+||+.... ...+.. +...+...+|+|+|+.++.+.
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----------------~~~l~~-~~~~~~~~~~SPdG~~la~~~- 130 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ----------------LITEER-IPNNTQWVTWSPVGHKLAYVW- 130 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE----------------ECCSSC-CCTTEEEEEECSSTTCEEEEE-
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc----------------EEEccc-CCCcceeeEECCCCCEEEEEE-
Confidence 59999999999887 556699975432 223444 567899999999999888774
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeee-cccc-----------------cceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHN-----------------QDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d 125 (138)
++.|++|++..+. ...+. .++. .....+.|+|+ ++.|+.++.|
T Consensus 131 ~~~i~~~~~~~~~----------~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d 191 (740)
T 4a5s_A 131 NNDIYVKIEPNLP----------SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFN 191 (740)
T ss_dssp TTEEEEESSTTSC----------CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEE
T ss_pred CCeEEEEECCCCc----------eEEEcCCCCccceecCcccccccchhcCCCcceEECCC-CCEEEEEEEc
Confidence 6789999987654 11111 1121 12235899999 9988887643
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.14 E-value=1.7e-09 Score=73.87 Aligned_cols=109 Identities=15% Similarity=0.071 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCC--------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d 72 (138)
|||||++|+.++.++ .|.+||+..... ......+...+...+..+.|+|+|++++++..+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------------~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------------FADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------------EEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------------ccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 689999999887553 799999752110 011222322246788999999999988888888
Q ss_pred Cc--EEEEeccCCCCCCceeeeeeeeeeecccccc--------eeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 73 DA--IRIFKENPEAGDSDMVSFDLVHTEHRAHNQD--------VNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 73 ~~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+. |.+|++..+. .......+... +..++|+|+ +.++++++. +.+++|.+
T Consensus 263 ~~~~l~~~~~~~~~----------~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 263 GWWNLHRVDPATGA----------ATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp SSCEEEEECTTTCC----------EEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS-SSCEEEEE
T ss_pred CCeEEEEEECCCCc----------eeecccccccccCccccccCceEeEeCC-CEEEEEEEc-CccEEEEE
Confidence 84 5555543333 11111111111 567888888 889999988 99999943
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.13 E-value=1.9e-09 Score=69.00 Aligned_cols=110 Identities=10% Similarity=-0.032 Sum_probs=72.4
Q ss_pred CccCCCeEEEeeC-CCc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD-DAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||||++|+.++. ++. |.+||+... +....... +...+..+.|+|+++.|+.++.++.|++
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g---------------~~~~lt~~-~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQ---------------VATQLTEG-RGDNTFGGFLSPDDDALFYVKDGRNLMR 106 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTC---------------EEEECCCS-SCBCSSSCEECTTSSEEEEEETTTEEEE
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCC---------------ceEEeeeC-CCCCccceEEcCCCCEEEEEeCCCeEEE
Confidence 6899999998887 674 666675322 22333333 4444556789999999999998889999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEE--EccCCCCEEEEE----------------------eCCCcEEEEEc
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA--WNPVVPGMLASC----------------------SDDGDVKLWQI 133 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~d~~v~~wd~ 133 (138)
||+..+. .......+...+.... ++|+ +..++.. ..+..|.+||+
T Consensus 107 ~d~~~g~----------~~~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 107 VDLATLE----------ENVVYQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp EETTTCC----------EEEEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred EECCCCc----------ceeeeechhhcccccceeECCC-CCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 9998765 2222223333343333 3777 7777632 24467899998
Q ss_pred CCCC
Q psy14817 134 KLEN 137 (138)
Q Consensus 134 ~~~~ 137 (138)
.+++
T Consensus 176 ~~g~ 179 (388)
T 3pe7_A 176 KTGE 179 (388)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7764
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.12 E-value=8.4e-09 Score=63.56 Aligned_cols=108 Identities=8% Similarity=0.092 Sum_probs=75.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeCCC-cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~d~-~i~i~ 78 (138)
++|+|+++++.+.++.|++|+... +.+..+... +...+..+++++++.++++...++ .|.+|
T Consensus 171 ~~~~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 171 VNDKQEIFISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp ECSSSEEEEEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 367888888888899999999521 123344331 235788999999999888887775 99999
Q ss_pred eccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... ...... .....+..+++.|+ ++++++ +.|+.|++|++...
T Consensus 235 ~~~g~~----------~~~~~~~~~~~~~~~i~~~~~-g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 235 TQDGQL----------ISALESKVKHAQCFDVALMDD-GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CTTSCE----------EEEEEESSCCSCEEEEEEETT-TEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCCE----------EEEEcccCCCCcceeEEECCC-CcEEEE-CCCCeEEEEEcccc
Confidence 854221 111111 12234778999998 877766 67999999998654
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.05 E-value=1.6e-09 Score=74.57 Aligned_cols=112 Identities=15% Similarity=0.039 Sum_probs=72.9
Q ss_pred CccCCCeEE-----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLA-----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~-----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++|| .|+++..|++||+....... ...+.. .....++|+|+++.|+.++.|..
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-------------~~~~~~---~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-------------VDVIEG---GKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-------------SCCBSC---CTTCCCEECTTSSEEEEEECCCCT
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-------------CcccCc---ccccceEEecCCCEEEEEEecCCC
Confidence 689999999 66667899999986543210 001111 11257899999998888887665
Q ss_pred ------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC----cEEEEEcCC
Q psy14817 75 ------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG----DVKLWQIKL 135 (138)
Q Consensus 75 ------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~v~~wd~~~ 135 (138)
|++|++..+. ... ........+...+..+.|+|+ +++|+.++.++ .|.+++..+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~---~~~---~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEP---SKD---TVVHERTGDPTTFLQSDLSRD-GKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCG---GGC---EEEECCCCCTTCEEEEEECTT-SCCEEEEEEETTTEEEEEEECTTC
T ss_pred CCccccCCCCCEEEEEECCCCc---hhc---eEEEecCCCCEEEEEEEECCC-CCEEEEEEeCCCCceEEEEEcCCC
Confidence 9999987653 000 011111234457889999999 88887776655 566665543
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.01 E-value=7.3e-09 Score=71.52 Aligned_cols=111 Identities=8% Similarity=-0.006 Sum_probs=73.4
Q ss_pred CccCCCeEEEeeCCC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++||.++.++ .|++||+... +.+..... ...+..+.|+|+++.|+.++.++.
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---------------~~~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDGA---------------KELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTTT---------------EEEEEEEE--EECSCCEEECTTSSEEEEEECCCCS
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCC---------------CCCccccc--CcccceEEEEeCCCEEEEEEECCcc
Confidence 689999999776543 8999997543 11221111 223667999999998887777655
Q ss_pred ---------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-----CCcEEEEEcC
Q psy14817 75 ---------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-----DGDVKLWQIK 134 (138)
Q Consensus 75 ---------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d~~v~~wd~~ 134 (138)
|++|++..+. ... ........+...+..+.|+|+ +++|+..+. +..|.+||+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~---~~~---~~v~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ---SED---ILCAEFPDEPKWMGGAELSDD-GRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG---GGC---EEEECCTTCTTCEEEEEECTT-SCEEEEEEECSSSSCCEEEEEEGG
T ss_pred ccccccccccCCCCEEEEEECCCCc---ccc---eEEeccCCCCeEEEEEEEcCC-CCEEEEEEEccCCCccEEEEEECc
Confidence 9999987543 000 011111123456778999999 888776654 5689999987
Q ss_pred C
Q psy14817 135 L 135 (138)
Q Consensus 135 ~ 135 (138)
+
T Consensus 268 ~ 268 (710)
T 2xdw_A 268 Q 268 (710)
T ss_dssp G
T ss_pred c
Confidence 5
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.99 E-value=3.9e-08 Score=60.59 Aligned_cols=108 Identities=7% Similarity=0.071 Sum_probs=76.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|+|+++++...++.|.+|+... +.+..+.. .+...+.++++++++.++++...++.|++|+
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQNG----------------NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS----------------CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEEcCCC----------------CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 357888888888889999999521 11222221 1345689999999999888877888999999
Q ss_pred ccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCC-cEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDG-DVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~-~v~~wd~~~ 135 (138)
..... ..... .++...+..+++.++ ++++++...++ .|.+||...
T Consensus 192 ~~g~~----------~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 192 YEGQY----------LRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp TTCCE----------EEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEEEECTTS
T ss_pred CCCCE----------EEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEEEECCCC
Confidence 75321 11111 122357889999998 88888887775 999998653
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=8e-09 Score=64.94 Aligned_cols=107 Identities=7% Similarity=0.069 Sum_probs=75.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|++++..++..+.++.++.|.- .....+.. +...+.+++|++++.+++++..++.|.+|+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~ 73 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTITA------------------EPWLEISK-KGLQLEGLNFDRQGQLFLLDVFEGNIFKINP 73 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEEEC------------------EEEEEEES-SCCCEEEEEECTTSCEEEEETTTCEEEEECT
T ss_pred ecCCccceeEEeecccCccccc------------------ceeEEEec-cCccccCcEECCCCCEEEEECCCCEEEEEeC
Confidence 3455555555566677777731 23444555 5567799999999998888888899999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC----CcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD----GDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~~ 137 (138)
..+. .......+...+.+++++|+ +.++++...+ +.|.+||..++.
T Consensus 74 ~~~~----------~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 74 ETKE----------IKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp TTCC----------EEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CCCc----------EEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 7654 22222234567999999998 8877777666 689999987654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.98 E-value=3.6e-08 Score=62.17 Aligned_cols=112 Identities=11% Similarity=0.046 Sum_probs=76.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe---------cCCCccCeEEEEEec-CCCeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---------SGHHGRTIYDISWCH-LTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~v~~~~-~~~~~~s~~ 70 (138)
++|+|+++++.+.++.|++|+...... .+..+ .. +......++++| ++.++++.+
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~--------------~~~~~~~~~~~g~~~~-~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEG--------------PLLILGRSMQPGSDQN-HFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSC--------------CSEEESBTTBCCCSTT-CCSSEEEEEECTTTCCEEEEEC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeE--------------EEEEecccCCCCCCcc-ccCCCcEEEEeCCCCeEEEEeC
Confidence 468899999999999999999643210 12222 12 345688999999 777888876
Q ss_pred -CCCcEEEEeccCCCCCCceeeeeeeeeee---------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -GDDAIRIFKENPEAGDSDMVSFDLVHTEH---------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|++|+.. +. ...... ..+-..+..+++.|+.+.++++...++.|++|+..+++
T Consensus 163 ~~~~~I~~~~~~-g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 163 YCNSRIVQFSPS-GK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp SSCCEEEEECTT-SC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCeEEEEcCC-CC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 68899999844 22 011110 11224578999999746677777788999999987543
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.95 E-value=5.9e-08 Score=62.09 Aligned_cols=108 Identities=8% Similarity=-0.097 Sum_probs=72.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEE--EEecCCCeEEEe---------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI--SWCHLTDLIATA--------- 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~~~~~~~~s~--------- 69 (138)
|||+|+.|+.++.++.|.+||+..... ..+.. . +...+... .+++++.+++..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~-------------~~~~~--~-~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEE-------------NVVYQ--V-PAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCE-------------EEEEE--C-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcc-------------eeeee--c-hhhcccccceeECCCCCeeccccccCccccc
Confidence 689999999999999999999754322 22222 2 23333333 348888877642
Q ss_pred -------------eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCC------CcEE
Q psy14817 70 -------------CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDD------GDVK 129 (138)
Q Consensus 70 -------------~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~v~ 129 (138)
..+..|.+||+..+. .... ..+...+..+.|+| + +..|+.+..+ ..|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~----------~~~l-~~~~~~~~~~~~sp~d-g~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGE----------STVI-LQENQWLGHPIYRPYD-DSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCC----------EEEE-EEESSCEEEEEEETTE-EEEEEEEECSCTTTSSCSEE
T ss_pred ccccchhhhhhccCCcceEEEEECCCCc----------eEEe-ecCCccccccEECCCC-CCEEEEEEecCCCCCcceEE
Confidence 234578889988765 2222 24556788999999 8 8888776653 3788
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
++|+..+
T Consensus 220 ~~d~~~~ 226 (388)
T 3pe7_A 220 LINEDGT 226 (388)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 8887654
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.95 E-value=1.1e-07 Score=59.95 Aligned_cols=111 Identities=9% Similarity=-0.004 Sum_probs=76.1
Q ss_pred CccCCCeEEEeeCC------------------------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE
Q psy14817 1 MIQTGSRLATCSDD------------------------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 56 (138)
Q Consensus 1 ~s~~~~~l~t~s~d------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 56 (138)
++|+|+++++.+.+ +.|.+||.... +.+..+...+......
T Consensus 31 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---------------~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 31 LDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---------------EILQSSGKNLFYLPHG 95 (329)
T ss_dssp ECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---------------CEEEEECTTTCSSEEE
T ss_pred ECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---------------eEEeccCCCccCCceE
Confidence 46889999988887 36777875322 2233333224457889
Q ss_pred EEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee--------cccccceeEEEEccCCCCEEEEEe-CCCc
Q psy14817 57 ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH--------RAHNQDVNCVAWNPVVPGMLASCS-DDGD 127 (138)
Q Consensus 57 v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~~~~-~d~~ 127 (138)
+++++++.++++...++.|++|+....... ..... ..+-..+..++++|+++.++++.+ .++.
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~--------~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGP--------LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCC--------SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEE--------EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 999999998888888899999997643100 11110 133446889999993288888886 6899
Q ss_pred EEEEEcC
Q psy14817 128 VKLWQIK 134 (138)
Q Consensus 128 v~~wd~~ 134 (138)
|++|+..
T Consensus 168 I~~~~~~ 174 (329)
T 3fvz_A 168 IVQFSPS 174 (329)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9999854
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.94 E-value=4.9e-08 Score=59.53 Aligned_cols=109 Identities=9% Similarity=-0.042 Sum_probs=77.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|+++++...++.|.+|+...... ...... +...+.++++++++.++++...++.|.+|+..
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~---------------~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQ---------------VVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCE---------------EECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eCCCCEEEEECCCCEEEEEecCCCce---------------Eeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 57788888887788999999643211 111112 23568899999999877777778899999886
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... .......+...+..+++.++ ++++++...++.|+++++...+
T Consensus 222 ~~~----------~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 222 STT----------STVLPFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CSC----------CEECCCCSCSCEEEEEECTT-CCEEEEEGGGTEEEEECCCGGG
T ss_pred CCc----------ceeeccCCCCCceeEEECCC-CCEEEEECCCCEEEEEcCCCcc
Confidence 543 11111123356889999998 8888888899999999987654
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.92 E-value=9.8e-08 Score=59.98 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=72.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----CcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----~~i~ 76 (138)
|+|+|++++++..++.|.+||..... ....... +...+.++++++++.++++...+ +.|.
T Consensus 52 ~~~~g~l~~~~~~~~~i~~~d~~~~~---------------~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 52 FDRQGQLFLLDVFEGNIFKINPETKE---------------IKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC---------------EEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCc---------------EEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 46889988888899999999964321 1111212 45679999999999877777665 6799
Q ss_pred EEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeC------CCcEEEEEcCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSD------DGDVKLWQIKL 135 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~------d~~v~~wd~~~ 135 (138)
+|+..... ..... ......+..+.+.|+ +.++++... .+.|..+|..+
T Consensus 116 ~~d~~~~~----------~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 116 AATENGDN----------LQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp EECTTSCS----------CEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred EEeCCCCE----------EEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCC
Confidence 99887654 11111 123457889999998 887776653 24555555543
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.91 E-value=9.8e-08 Score=64.57 Aligned_cols=106 Identities=6% Similarity=-0.079 Sum_probs=76.0
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc-
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN- 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~- 81 (138)
|.+.++++...++.|.++|.... +.+..+.. ...+..+.++|+++++++++.++.|.+||+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~---------------~v~~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY---------------EIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC---------------CEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred CCceEEEEeCCCCeEEEEECCCC---------------eEEEEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECCC
Confidence 34457888889999999996433 33555554 3467799999999998888999999999995
Q ss_pred -CCCCCCceeeeeeeeeeecccccceeEEEEc----cCCCCEEEEEeC-CCcEEEEEcCCCC
Q psy14817 82 -PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN----PVVPGMLASCSD-DGDVKLWQIKLEN 137 (138)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~-d~~v~~wd~~~~~ 137 (138)
... ...... .......+.++ |+ ++++++++. ++++.++|..+.+
T Consensus 228 ~t~~---------~v~~i~--~G~~P~~ia~s~~~~pD-Gk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 228 KEPT---------TVAEIK--IGSEARSIETSKMEGWE-DKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp SSCC---------EEEEEE--CCSEEEEEEECCSTTCT-TTEEEEEEEETTEEEEEETTTCC
T ss_pred CCCc---------EeEEEe--cCCCCceeEEccccCCC-CCEEEEEEccCCeEEEEECCCCc
Confidence 333 112221 12346789999 68 887766664 6999999977654
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.90 E-value=2.7e-08 Score=63.63 Aligned_cols=106 Identities=6% Similarity=0.021 Sum_probs=71.8
Q ss_pred CCCeEEEee------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-------
Q psy14817 4 TGSRLATCS------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------- 70 (138)
Q Consensus 4 ~~~~l~t~s------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------- 70 (138)
+++++.... .|+.|.+||.... +.+..+.. +..+ .++++|++++++.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~---------------~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~ 75 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNG---------------KFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERIT 75 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTC---------------CEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSS
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCC---------------eEEEEecC-CCCC--ceEECCCCCEEEEEEecccccc
Confidence 566555543 4789999995332 33455555 3444 899999999887775
Q ss_pred ---CCCcEEEEeccCCCCCCceeeeeeeeeeecc-----cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA-----HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.+||....+ ........ +......++++|+ +++|++++. ++.|.+||+.+++
T Consensus 76 ~g~~~~~v~v~d~~t~~---------~~~~i~~~~~~~~~g~~p~~i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 76 RGKRSDVVEVWDADKLT---------FEKEISLPPKRVQGLNYDGLFRQTTD-GKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp SSCEEEEEEEEETTTCC---------EEEEEEECTTBCCBCCCGGGEEECTT-SSEEEEEEESSSEEEEEEETTTTE
T ss_pred cCCCCCEEEEEECcCCc---------EEEEEEcCccccccCCCcceEEECCC-CCEEEEECCCCCCeEEEEECCCCc
Confidence 35679999987654 11111101 2345678999999 998888764 6789999998754
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.86 E-value=1.3e-07 Score=58.42 Aligned_cols=101 Identities=7% Similarity=-0.024 Sum_probs=72.0
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-cCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..+++|++++.|+.|.+||... .+.+..+.. +. ..+.++.+.|+|.++++ .++.|..||.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~t---------------G~~~w~~~~-~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~- 63 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDT---------------KEIVWEYPL-EKGWECNSVAATKAGEILFS--YSKGAKMITR- 63 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTT---------------TEEEEEEEC-CTTCCCCEEEECTTSCEEEE--CBSEEEEECT-
T ss_pred CCCcEEEeeCCCCEEEEEECCC---------------CeEEEEeCC-CccCCCcCeEECCCCCEEEe--CCCCEEEECC-
Confidence 3578999999999999999533 255666666 33 46889999999998883 4677999988
Q ss_pred CCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeC-CCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~ 133 (138)
.++ ..-.... ....+..+.+.++ ++++++.+. ++.+..+|.
T Consensus 64 ~G~----------~~W~~~~~~~~~~~~~~~~~d-G~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 64 DGR----------ELWNIAAPAGCEMQTARILPD-GNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp TSC----------EEEEEECCTTCEEEEEEECTT-SCEEEEEESTTEEEEEECT
T ss_pred CCC----------EEEEEcCCCCccccccEECCC-CCEEEEecCCCCEEEEEeC
Confidence 444 1111112 2246778888898 898888776 666766665
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.83 E-value=2.5e-07 Score=59.23 Aligned_cols=66 Identities=6% Similarity=0.136 Sum_probs=49.6
Q ss_pred EEEecCCCeEEEeeC-----------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 57 ISWCHLTDLIATACG-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 57 v~~~~~~~~~~s~~~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
++++|++..++.+.. ...|.+||+...+ .......+. +..++|+|+ +++|++++.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~----------~v~~i~~~~--p~~ia~spd-g~~l~v~n~- 324 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ----------RVARIPGRD--ALSMTIDQQ-RNLMLTLDG- 324 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE----------EEEEEECTT--CCEEEEETT-TTEEEEECS-
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc----------EEEEEecCC--eeEEEECCC-CCEEEEeCC-
Confidence 678999886555432 3479999988765 222222333 899999999 888888886
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
+.|.+||..++
T Consensus 325 ~~v~v~D~~t~ 335 (361)
T 2oiz_A 325 GNVNVYDISQP 335 (361)
T ss_dssp SCEEEEECSSS
T ss_pred CeEEEEECCCC
Confidence 99999999887
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.80 E-value=5.3e-08 Score=62.86 Aligned_cols=112 Identities=6% Similarity=-0.020 Sum_probs=71.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++...++++|+.+ .+.+|++........ .... . .++..... +.. |+.++| ++.+++.+ .++.|++||+.
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~~-~~~~-~--~~~~~~~~--lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHIT-SDST-P--LTFKWEKE--IPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHHH-SSSC-C--CCCSEEEE--CTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhhc-cccc-c--ccceEEee--CCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 5678889999987 555598643220000 0000 0 11112222 345 999999 88888888 88999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... .......+...+..+.+.+. .++.++.||.|.+||+..+.
T Consensus 115 sl~----------~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 115 ELS----------EFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp STT----------CEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC
T ss_pred hhh----------ccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCc
Confidence 654 11112244556777776654 38889999999999998653
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.77 E-value=2.4e-07 Score=58.47 Aligned_cols=92 Identities=11% Similarity=0.146 Sum_probs=59.5
Q ss_pred CccCCCeEEEeeCC---Cc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDD---AT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|||+|++||.++.+ +. |.+|++... +...... +.. +..+.|+|++..|+.++.+
T Consensus 66 ~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---------------~~~~l~~--~~~-~~~~~wspdg~~l~~~~~~~~~ 127 (347)
T 2gop_A 66 ISPDGKKIAFMRANEEKKVSEIWVADLETL---------------SSKKILE--AKN-IRSLEWNEDSRKLLIVGFKRRE 127 (347)
T ss_dssp ECTTSSEEEEEEEETTTTEEEEEEEETTTT---------------EEEEEEE--ESE-EEEEEECTTSSEEEEEEECCCC
T ss_pred ECCCCCEEEEEEeccCCCcceEEEEECCCC---------------ceEEEEc--CCC-ccceeECCCCCEEEEEEccCCC
Confidence 68999999988754 34 666665321 2222222 233 8999999999977766532
Q ss_pred ------------------------CcEEEEeccCCCCCCceeeeeee-eeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 73 ------------------------DAIRIFKENPEAGDSDMVSFDLV-HTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 73 ------------------------~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
..|.+|++..+. . .... . . .+..+.|+|+ + ++++++.+
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~----------~~~~l~-~-~-~~~~~~~spd-g-~~~~~~~~ 190 (347)
T 2gop_A 128 DEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE----------VIEEFE-K-P-RFSSGIWHRD-K-IVVNVPHR 190 (347)
T ss_dssp ---------CCCC---------CEEEEEEEETTTTE----------EEEEEE-E-E-TTCEEEEETT-E-EEEEEECC
T ss_pred cCCcEEEcccceeecCcccccCccceEEEEECCCCe----------EEeeec-C-C-CcccccCCCC-e-EEEEEecc
Confidence 468888887654 2 1222 2 2 6788999999 7 77777654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.76 E-value=4.8e-07 Score=55.09 Aligned_cols=108 Identities=5% Similarity=-0.107 Sum_probs=73.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+...... ...... ....+.++++++++.++++...++.|.+|+..
T Consensus 116 ~~~g~l~v~~~~~~~i~~~~~~~~~~---------------~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 116 DTQGAVYVADRGNNRVVKLAAGSKTQ---------------TVLPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTCCSC---------------EECCCC-SCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEEECCCcee---------------Eeeccc-cCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 56888888877888999997422111 111111 23456789999999877777777889999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
... ...........+..+++.++ +.++++...++.|.+|+....
T Consensus 180 ~~~----------~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 180 SNN----------QVVLPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TCC----------EEECCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCS
T ss_pred CCc----------eEeecccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCC
Confidence 543 11111123356789999998 777777777889999998654
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.74 E-value=5.4e-07 Score=62.23 Aligned_cols=111 Identities=5% Similarity=-0.194 Sum_probs=69.2
Q ss_pred CccCCCeEEEeeCCCc-------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE
Q psy14817 1 MIQTGSRLATCSDDAT-------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 67 (138)
|+|||+.|+.++.|.. |++|++...... ...+..... +...+..+.|+|+|++++
T Consensus 175 wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-----------~~lv~~~~~-~~~~~~~~~~SpDG~~l~ 242 (695)
T 2bkl_A 175 WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-----------DTVVHERTG-DPTTFLQSDLSRDGKYLF 242 (695)
T ss_dssp ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-----------CEEEECCCC-CTTCEEEEEECTTSCCEE
T ss_pred EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-----------ceEEEecCC-CCEEEEEEEECCCCCEEE
Confidence 6899999999998876 999997544321 123444333 456788999999999777
Q ss_pred EeeCCC----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCC
Q psy14817 68 TACGDD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLE 136 (138)
Q Consensus 68 s~~~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~ 136 (138)
..+.++ .|.+++...+. ...+. .+...+....+ ++ +.+++... .++.|.+||+.++
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~~----------~~~l~-~~~~~~~~~~~-~~-g~l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 243 VYILRGWSENDVYWKRPGEKD----------FRLLV-KGVGAKYEVHA-WK-DRFYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EEEEETTTEEEEEEECTTCSS----------CEEEE-ECSSCCEEEEE-ET-TEEEEEECTTCTTCEEEEEBTTBC
T ss_pred EEEeCCCCceEEEEEcCCCCc----------eEEee-cCCCceEEEEe-cC-CcEEEEECCCCCCCEEEEEeCCCC
Confidence 666554 46666443222 11111 33334455555 45 44555554 2578999998664
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.74 E-value=2e-08 Score=64.28 Aligned_cols=68 Identities=9% Similarity=-0.002 Sum_probs=45.2
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||+|++|+..+.+ ..|.+|++... +. ..+...+......+.|+|+++.|+.++.++.|++
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~---------------~~-~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQ---------------QA-VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMK 106 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTT---------------EE-EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEE
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCC---------------cE-EEeecCCCCccccceECCCCCEEEEEEcCCcEEE
Confidence 68999998876543 36777775332 11 2222212222334789999999988888889999
Q ss_pred EeccCCC
Q psy14817 78 FKENPEA 84 (138)
Q Consensus 78 ~~~~~~~ 84 (138)
|++..+.
T Consensus 107 ~d~~~~~ 113 (396)
T 3c5m_A 107 VDLETLE 113 (396)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9988654
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.74 E-value=4.5e-07 Score=57.23 Aligned_cols=109 Identities=8% Similarity=-0.051 Sum_probs=72.7
Q ss_pred CccCCCeEEEeeCC----------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee
Q psy14817 1 MIQTGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~ 70 (138)
++|+|++++++..+ +.|.++|.... +....+..........++++|++..+..+.
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCC---------------eEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 36788888887665 78999996332 233333321134678999999999777665
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE----eCCCcEEEEEcC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC----SDDGDVKLWQIK 134 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~d~~v~~wd~~ 134 (138)
. .|.+||...+... ..............++++|+++.++++. ..++.|.+||..
T Consensus 244 ~--~v~~~d~~t~~~~--------~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 244 N--DIWRMPVEADRVP--------VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S--SEEEEETTCSSCC--------SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred c--EEEEEECCCCcee--------eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 4 8999998765510 0011111145788999999646777776 678899999987
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.73 E-value=8.3e-08 Score=66.68 Aligned_cols=111 Identities=11% Similarity=0.028 Sum_probs=69.0
Q ss_pred CccCCCeEEEeeCC-----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++||.++.+ ..|++||+..... +.. .. +...+..+.|+|+ +.|+.+..++.
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~---------------~~~-~~-~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP---------------LAD-EL-KWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCE---------------EEE-EE-EEEESCCCEESTT-SEEEEEECCCC-
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---------------CCc-cC-CCceeccEEEECC-CEEEEEEecCcc
Confidence 68999999877654 4699999754321 111 11 1122357889999 87776665543
Q ss_pred -------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 75 -------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 75 -------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
|++|++.... ... ........+...+..+.|+|+ +++|+..+.++ .|.+||+.++
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~---~~~---~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQ---SAD---QPVFATPELPKRGHGASVSSD-GRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp -------CCCCCEEEEEETTSCG---GGC---EEEECCTTCTTCEEEEEECTT-SCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cccccccCCCCCEEEEEECCCCc---hhC---EEEeccCCCCeEEEEEEECCC-CCEEEEEEEccCCCcceEEEEECCCC
Confidence 7888876443 000 011111123335788999999 88887776543 7999998665
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.72 E-value=1e-06 Score=54.53 Aligned_cols=108 Identities=8% Similarity=0.029 Sum_probs=70.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCce-EEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW-KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++.+++.+.++.|.+|++..... . .....+.. +...+.+++++++|.++++. ++.|.+|+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~------------~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGE------------TEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSC------------EEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCc------------CcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 578999888888899999999752111 0 00122222 44566789999999866665 77899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEE-ccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. +. .......+.. +.+++| .|+ ++.|..++.++ +.-++.+++.
T Consensus 244 ~~-g~----------~~~~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 244 PD-GD----------ELGRVLTPQT-TSNLCFGGPE-GRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp TT-SC----------EEEEEECSSC-CCEEEEESTT-SCEEEEEETTE-EEEEECSCCB
T ss_pred CC-CC----------EEEEEECCCC-ceeEEEECCC-CCEEEEEcCCe-EEEEEccccc
Confidence 86 33 2222223444 889999 477 78888777764 5555666554
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.72 E-value=1.1e-06 Score=60.80 Aligned_cols=113 Identities=1% Similarity=-0.208 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCCc----------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCSDDAT----------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~----------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 64 (138)
|||||+.|+.++.++. |++|++...... -..+..... +...+..+.|+|+|+
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~-----------~~~v~~~~~-~~~~~~~~~~SpDg~ 245 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE-----------DILCAEFPD-EPKWMGGAELSDDGR 245 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG-----------CEEEECCTT-CTTCEEEEEECTTSC
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc-----------ceEEeccCC-CCeEEEEEEEcCCCC
Confidence 6899999999988876 999997543210 022333222 455678999999999
Q ss_pred eEEEeeC-----CCcEEEEeccC------CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C---CcEE
Q psy14817 65 LIATACG-----DDAIRIFKENP------EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D---GDVK 129 (138)
Q Consensus 65 ~~~s~~~-----d~~i~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d---~~v~ 129 (138)
+++..+. +..|++||+.. +.. . ...+ ..+...+.. .|+|+ +..|+..+. + +.|.
T Consensus 246 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~------~~~l-~~~~~~~~~-~~s~d-g~~l~~~s~~~~~~~~l~ 314 (710)
T 2xdw_A 246 YVLLSIREGCDPVNRLWYCDLQQESNGITGIL--K------WVKL-IDNFEGEYD-YVTNE-GTVFTFKTNRHSPNYRLI 314 (710)
T ss_dssp EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--C------CEEE-ECSSSSCEE-EEEEE-TTEEEEEECTTCTTCEEE
T ss_pred EEEEEEEccCCCccEEEEEECcccccccCCcc--c------eEEe-eCCCCcEEE-EEecc-CCEEEEEECCCCCCCEEE
Confidence 7776654 56799999875 210 0 1111 233333333 47788 666655543 2 3589
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
+||+.++
T Consensus 315 ~~d~~~~ 321 (710)
T 2xdw_A 315 NIDFTDP 321 (710)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 9998764
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=5.9e-07 Score=57.44 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=62.2
Q ss_pred CccCCCeEEEeeCC-----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEee----
Q psy14817 1 MIQTGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATAC---- 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~---- 70 (138)
|+|+|++|+.++.+ +.|.+||+..... ..+..+.+ .. +.|+| ++.+++.++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------------EEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------------EEEEECCS-----EE-EEEECSSSSEEEEEECCC-
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCe-------------EEeeeCCC-----CC-CCccCCCCceEEEecCCcc
Confidence 68999988777654 4499999743211 22222222 22 88999 999777654
Q ss_pred ------------CCCcEEEEeccCCCCCCceeeeeeeeeeeccccc-----------ceeEEEEccCCCCEEEEEeC-CC
Q psy14817 71 ------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASCSD-DG 126 (138)
Q Consensus 71 ------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~~~~~-d~ 126 (138)
.+..|.+||+..+. ...+ ..+.. .+..+.|+|+ +..|+.++. ++
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~ 373 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAKS----------AQKL-CKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEG 373 (396)
T ss_dssp ---------CCCCCCEEEEEETTTTB----------CCEE-EECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTS
T ss_pred eeeccccccccCCCCcEEEEecccCc----------eEEc-cCCCCccccccccccCCCCCceEccC-CCeEEEEecCCC
Confidence 24679999987654 1111 12222 2566789999 877766654 55
Q ss_pred cEEEEEc
Q psy14817 127 DVKLWQI 133 (138)
Q Consensus 127 ~v~~wd~ 133 (138)
...+|.+
T Consensus 374 ~~~l~~~ 380 (396)
T 3c5m_A 374 VPAIYIA 380 (396)
T ss_dssp SCEEEEE
T ss_pred CceEEEE
Confidence 5555543
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=1.3e-06 Score=54.30 Aligned_cols=112 Identities=9% Similarity=0.113 Sum_probs=72.5
Q ss_pred cCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-cCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 3 QTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 3 ~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+++. +++...++.|.+|+...... .........+.. +. ..+..++++++|.++++...++.|.+|+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~---------~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAK---------IENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTE---------EEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCc---------cccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 77754 45556788999999642110 001112333333 33 56788999999998888777889999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~ 135 (138)
..+. .......+...+.++++.|+ ++ ++++...++.|..|++..
T Consensus 255 ~~g~----------~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 255 DGGQ----------PKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCBS----------CSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSS
T ss_pred CCCc----------EeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCC
Confidence 7443 11111233467899999998 77 445555678899998764
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.64 E-value=1.1e-06 Score=54.35 Aligned_cols=96 Identities=13% Similarity=0.034 Sum_probs=65.9
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|+ +++++..++.|..|+.... ...+.. +...+.++++++++.++++...++.|.+|+
T Consensus 35 ~d~~g~~l~~~~~~~~~i~~~~~~~~-----------------~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 35 YVPARSAVIFSDVRQNRTWAWSDDGQ-----------------LSPEMH-PSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTSC-----------------EEEEES-SCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EeCCCCEEEEEeCCCCEEEEEECCCC-----------------eEEEEC-CCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 568888 7888999999999996322 233334 566789999999999887776778899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
...+. .. . ............+..+++.|+ ++++++
T Consensus 97 ~~~g~---~~-~--~~~~~~~~~~~~~~~i~~d~~-G~l~vt 131 (296)
T 3e5z_A 97 EPGGE---WE-S--IADSFEGKKLNSPNDVCLAPD-GSLWFS 131 (296)
T ss_dssp STTCC---EE-E--EECEETTEECCCCCCEEECTT-SCEEEE
T ss_pred CCCCc---EE-E--EeeccCCCCCCCCCCEEECCC-CCEEEE
Confidence 86554 00 0 000000111235678999998 888887
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.63 E-value=1.3e-06 Score=56.42 Aligned_cols=108 Identities=9% Similarity=-0.048 Sum_probs=74.3
Q ss_pred ccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee------
Q psy14817 2 IQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------ 70 (138)
Q Consensus 2 s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------ 70 (138)
.|+++.+..... ++.|.+.|... .+.+..+.. ...+ . +.++|++++++.+.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t---------------~~v~~~I~v-G~~P-~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA---------------GRVIGMIDG-GFLP-N-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT---------------TEEEEEEEE-CSSC-E-EEECTTSSCEEEEEEEEEET
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC---------------CeEEEEEEC-CCCC-c-EEECCCCCEEEEEccccccc
Confidence 578877766654 67999999533 255666654 3344 4 99999999665554
Q ss_pred ----CCCcEEEEeccCCCCCCceeeeeeeeeeeccc------ccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ----GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH------NQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.+||..... ....+..+. ......+.++|+ +++++.++. ++.|.++|+.+++
T Consensus 103 ~~G~~~~~VsviD~~t~~---------v~~~I~v~~g~r~~~g~~P~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLL---------PTADIELPDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TEEEEEEEEEEECTTTCC---------EEEEEEETTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCCEEEEEECCCCe---------EEEEEECCCccccccCCCCceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCc
Confidence 35689999998765 122111111 225677999999 888887764 6889999998765
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.62 E-value=1.3e-06 Score=54.03 Aligned_cols=109 Identities=11% Similarity=0.055 Sum_probs=71.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~ 79 (138)
++|+|++++ +.++.|..||. .. +.+..+.......+.++.+.++|..+++.+. ++.+..++
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G---------------~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DG---------------RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TS---------------CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CC---------------CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 368899888 34778888885 22 3355555422346788999999999888877 66777776
Q ss_pred ccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.. ++ ..+..... ....+......++..++ ++++++...++.|..||..
T Consensus 106 ~~-Gk-----~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 106 MK-GE-----VLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TT-SC-----EEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTT
T ss_pred CC-CC-----EEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCC
Confidence 53 22 11111110 00112234556677888 9999999999999999987
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.59 E-value=6.2e-06 Score=55.95 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=73.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEe----cCCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC----HLTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~----~~~~~~~s~~-~d~~i 75 (138)
|||+|+++.+++.|+.|.+||+... ..+.+..+.. ......+.++ |+|++++.++ .++.+
T Consensus 204 ~SpDGr~lyv~~~dg~V~viD~~~~-------------t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v 268 (567)
T 1qks_A 204 LSASGRYLFVIGRDGKVNMIDLWMK-------------EPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQY 268 (567)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSS-------------SCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC-------------CCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeE
Confidence 5899999999999999999997311 1133455544 2346789999 6999766655 45889
Q ss_pred EEEeccCCCCCCceeeeeeeeeee--c---cc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEH--R---AH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.++|....+ ........-. . .| ...+..+..+++...+++....+|.|.++|...
T Consensus 269 ~ViD~~t~~-----~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 269 VIMDGETLE-----PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp EEEETTTCC-----EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred EEEECCCCc-----EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 999977654 1110000000 0 01 125677777877445566666678888888654
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.55 E-value=4.5e-06 Score=52.59 Aligned_cols=98 Identities=7% Similarity=0.013 Sum_probs=65.3
Q ss_pred ccCCCeEEEeeCCC--------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE-EEEecCCCeEEEeeCC
Q psy14817 2 IQTGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGD 72 (138)
Q Consensus 2 s~~~~~l~t~s~d~--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~s~~~d 72 (138)
||+|++|+.++.+. .|.+|| .. . ...+...+...+.. +.|+ ++ ++++++.+
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~---------------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-E---------------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-C---------------EEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CC-c---------------eEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 68999888777543 566666 11 1 12233224567775 8999 88 88999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE-EEEEcC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV-KLWQIK 134 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v-~~wd~~ 134 (138)
+.+++| +..+. ..... .+...|..+.|+| .++++++.++.. .+|.+.
T Consensus 283 ~~~~l~-~~~g~----------~~~~~-~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 283 GSVNLY-IWDGE----------IKPIA-KGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TEEEEE-EESSS----------EEEEE-CSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred CcEEEE-EcCCc----------eEEEe-cCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 999999 87322 12222 3466788999987 577777776665 777664
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.50 E-value=6.5e-06 Score=51.95 Aligned_cols=104 Identities=10% Similarity=-0.006 Sum_probs=68.1
Q ss_pred CCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----------C
Q psy14817 5 GSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----------D 73 (138)
Q Consensus 5 ~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----------~ 73 (138)
++.+++.. .++.|.++|.... +.+..+.. ......+.+++++.+++++..+ +
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~---------------~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETD---------------KVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTT---------------EEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred CEEEEEcCCCCCEEEEEECCCC---------------eEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 34455444 4889999996432 33444433 2345678899999877776554 6
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|.++|..... ...............++++|+ +..+..+.. .|.+||..+++
T Consensus 204 ~v~~id~~t~~---------v~~~~~~~~g~~p~~la~~~d-~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 204 SLYRIDAETFT---------VEKQFKFKLGDWPSEVQLNGT-RDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp EEEEEETTTTE---------EEEEEECCTTCCCEEEEECTT-SCEEEEESS--SEEEEETTCSS
T ss_pred eEEEEECCCCe---------EEEEEecCCCCCceeEEEecC-CCEEEEEcc--EEEEEECCCCc
Confidence 89999987654 111111122346889999998 777776654 89999987765
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.49 E-value=1.7e-05 Score=49.24 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=53.9
Q ss_pred cCeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 52 RTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
...+.++|+|++..+ ++.+.++.|.+|++....+. ................+..+++.++ +++.++...++.|..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~---~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ---ISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC---EEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc---ccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCCEEEE
Confidence 456889999999854 55566788999988522211 1000011111123356788999998 888888777888999
Q ss_pred EEcCCCC
Q psy14817 131 WQIKLEN 137 (138)
Q Consensus 131 wd~~~~~ 137 (138)
||..+++
T Consensus 225 ~d~~tG~ 231 (297)
T 3g4e_A 225 LDPVTGK 231 (297)
T ss_dssp ECTTTCC
T ss_pred EcCCCce
Confidence 9987654
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.48 E-value=2.1e-05 Score=50.66 Aligned_cols=107 Identities=12% Similarity=-0.073 Sum_probs=69.6
Q ss_pred ccCCCeEEEeeC--CC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee------
Q psy14817 2 IQTGSRLATCSD--DA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------ 70 (138)
Q Consensus 2 s~~~~~l~t~s~--d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------ 70 (138)
+|+++++..... .. .|.++|.... +.+..+.. ...+ .+.++|++++++.+.
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---------------~~~~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~ 90 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSG---------------SILGHVNG-GFLP--NPVAAHSGSEFALASTSFSRI 90 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCC---------------eEEEEecC-CCCC--CeEECCCCCEEEEEecccccc
Confidence 356776665543 22 7889996332 34556654 2333 899999999777765
Q ss_pred ----CCCcEEEEeccCCCCCCceeeeeeeeeeecc------cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ----GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA------HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.++|....+ ........ .......+.++|+ +++|+.++. +..|.++| .+++
T Consensus 91 ~rg~~~~~v~viD~~t~~---------~~~~i~~~~~~~~~~g~~p~~~~~spD-G~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 91 AKGKRTDYVEVFDPVTFL---------PIADIELPDAPRFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred ccCCCCCeEEEEECCCCc---------EEEEEECCCccccccCCCccceEECCC-CCEEEEEecCCCCeEEEEE-CCCC
Confidence 35789999997654 11111101 1123567899999 998888774 47899999 8765
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.47 E-value=1.4e-05 Score=49.08 Aligned_cols=105 Identities=10% Similarity=0.010 Sum_probs=70.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|..|+... . .. ...+.. ....+.++.+.+++.++++...++.|..|+.
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~g--~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKKG--I------------IK-EYTLPN-PDSAPYGITEGPNGDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTTS--C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred CCCCCEEEeCCCCCeEEEECCCC--c------------EE-EEeCCC-cCCCceeeEECCCCCEEEEecCCceEEEECC-
Confidence 46788888777788899898531 1 11 112222 3457889999999988887767788999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+. ............+..+.+.++ +.++++...++.|..||.
T Consensus 128 ~g~---------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 128 DGK---------IREYELPNKGSYPSFITLGSD-NALWFTENQNNAIGRITE 169 (299)
T ss_dssp TCC---------EEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred CCC---------EEEecCCCCCCCCceEEEcCC-CCEEEEeCCCCEEEEEcC
Confidence 333 011111123456889999988 777777766788888887
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.42 E-value=3.9e-05 Score=47.11 Aligned_cols=104 Identities=10% Similarity=-0.057 Sum_probs=70.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+. .. . .. ...... ....+..+.+.+++.++++...++.|..++.
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DG-K------------IR-EYELPN-KGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TC-C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred CCCCCEEEEecCCceEEEECC-CC-C------------EE-EecCCC-CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 467888887777888998885 11 1 01 112222 3456889999999987777766788999988
Q ss_pred CCCCCCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+. .... .......+..+++.++ +.++++...++.|..||.
T Consensus 170 ~g~----------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 170 SGD----------ITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITT 211 (299)
T ss_dssp TCC----------EEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT
T ss_pred CCc----------EEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECC
Confidence 433 1111 1123456788999988 887777666788999987
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.41 E-value=1.9e-05 Score=49.08 Aligned_cols=103 Identities=6% Similarity=-0.102 Sum_probs=65.7
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++.+ ++.+.++.|.+|++..... .....+....+.. +......+++.++|.+.++....+.|..|+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G--------~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTG--------QISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTC--------CEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCC--------cccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 57888755 5667788999998631111 0011122333333 345678899999998888777778899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEEEEEe
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCS 123 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~ 123 (138)
...++ ...........+++++|. |+ .+.|..++
T Consensus 227 ~~tG~----------~~~~i~~p~~~~t~~~f~g~d-~~~L~vt~ 260 (297)
T 3g4e_A 227 PVTGK----------RLQTVKLPVDKTTSCCFGGKN-YSEMYVTC 260 (297)
T ss_dssp TTTCC----------EEEEEECSSSBEEEEEEESGG-GCEEEEEE
T ss_pred CCCce----------EEEEEECCCCCceEEEEeCCC-CCEEEEEc
Confidence 87655 222222344678999998 77 66554333
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.40 E-value=1.9e-06 Score=59.57 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=66.5
Q ss_pred CccCCCeEE-----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeEEEeeCCC-
Q psy14817 1 MIQTGSRLA-----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLIATACGDD- 73 (138)
Q Consensus 1 ~s~~~~~l~-----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~s~~~d~- 73 (138)
|||||++|| .|++...|++||+..... +. .+.. .....++|+ |++.|+-++.+.
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~---------------~~~~~~~---~k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQP---------------LETPLKD---VKFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSE---------------EEEEEEE---EESCCCEEE-TTTEEEEEESSCC
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCC---------------CccccCC---ceeccEEEe-CCCEEEEEEecCc
Confidence 689999988 344456899999854321 11 1111 113567899 999777766663
Q ss_pred ------------cEEEEeccCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEE-e---CCCcEEEEEcCCC
Q psy14817 74 ------------AIRIFKENPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASC-S---DDGDVKLWQIKLE 136 (138)
Q Consensus 74 ------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~-~---~d~~v~~wd~~~~ 136 (138)
.|++|++.... ... ........ +......+.|+|+ +++|+.. + .+..|.++|+.++
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~---~~~---~~v~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQ---EDD---RLVFGAIPAQHHRYVGATVTED-DRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp C-------CCCCEEEEEETTSCG---GGC---EEEESCSGGGCCSEEEEEECTT-SCEEEEEEESSSSCCEEEEEETTST
T ss_pred ccccccccCCCcEEEEEECCCCc---ccc---eEEEecCCCCCeEEEEEEEcCC-CCEEEEEEccCCCCcEEEEEECCCC
Confidence 38888876543 000 01111112 3345678899999 8766443 3 2357899998665
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.37 E-value=4e-05 Score=49.37 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=63.7
Q ss_pred CccCCCeEEEee----------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------CccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s----------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~ 64 (138)
|||+|+++..+. .++.|.+||..... .+..+... +......+.++|+|+
T Consensus 73 ~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~---------------~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 73 AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL---------------PIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred ECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc---------------EEEEEECCCccccccCCCccceEECCCCC
Confidence 589999888875 36789999974322 22222210 012345789999999
Q ss_pred eEEEeeC--CCcEEEEeccCCCCCCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 65 LIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 65 ~~~s~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+++.+.. ++.|.++| ..++ .... . .... ++.+.|+....+++.+.|+.+.++|.
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~----------~~~~~i-~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGS----------SDDQLL-SSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCC----------EEeEEc-CCCc---eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 8887764 47899999 7655 1111 1 1111 13344553455666777888888877
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.34 E-value=2.6e-05 Score=50.84 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=69.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i~ 78 (138)
|+++++++++...++.|++||.... . +..+.. ...... ++|++++..++.+..++ .|.++
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~g---------------~-~~~~~~-~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDDN---------------K-VTTVHP-GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVY 199 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTTT---------------E-EEEEEE-TCCBCB-CEECTTSSEEEEEBSSTTCEEEEE
T ss_pred EeCCCCEEEEecCCCcEEEEECCCC---------------E-EEEeec-cCCCCc-eeEecCCCcEEEEecCCCceEEEE
Confidence 4578888888888899999996422 1 112211 122233 89999999888777655 68888
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... .... ...........+.+++++|+ ...|+.+..++.|..||..++
T Consensus 200 d~~~~~---~~~~---~g~~~~~~~~~p~~iav~p~-~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 200 MKASGW---APTR---IGQLGSTFSGKIGAVALDET-EEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp EGGGTT---CEEE---EEECCTTSCSCCCBCEECTT-SSEEEEECTTCEEEEEETTTC
T ss_pred EcCCCc---eeEE---eeeccchhcCCcEEEEEeCC-CCeEEEEECCCcEEEEECCCC
Confidence 876543 0000 00001113456788999996 444444667888999998754
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.31 E-value=0.00011 Score=45.18 Aligned_cols=106 Identities=8% Similarity=0.008 Sum_probs=71.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+.. . . .. ...+.. ....+.++.+.+++.++++...++.|..++..
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-G-R------------IK-EFEVPT-PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-S-C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEEcCCCCeEEEECCC-C-c------------eE-EEECCC-CCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 4678888877778999999854 1 1 01 112222 34678899999999877777667889999877
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+. ............+..+++.++ +.++++...++.|..+|..
T Consensus 92 -g~---------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 92 -GG---------FTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp -SC---------EEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT
T ss_pred -CC---------eEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC
Confidence 43 111111123356888999887 8877777667788888765
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.28 E-value=7.8e-05 Score=52.04 Aligned_cols=112 Identities=8% Similarity=-0.114 Sum_probs=65.8
Q ss_pred CccCCCeEEEeeCCCc--------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE
Q psy14817 1 MIQTGSRLATCSDDAT--------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 66 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~--------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 66 (138)
|||| +.|+.++.|+. |.+|++..... ....+..... +...+..+.|+|+|+++
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----------~~~lv~~~~~-~~~~~~~~~~SpDG~~l 282 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-----------ADQPVFATPE-LPKRGHGASVSSDGRWV 282 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-----------GCEEEECCTT-CTTCEEEEEECTTSCEE
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-----------hCEEEeccCC-CCeEEEEEEECCCCCEE
Confidence 6899 88888887664 77888643321 0122333222 33458899999999977
Q ss_pred EEeeCCC-----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC----CCcEEEEEcCC
Q psy14817 67 ATACGDD-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD----DGDVKLWQIKL 135 (138)
Q Consensus 67 ~s~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d~~v~~wd~~~ 135 (138)
+..+.++ .|++||+..+.. . .......+...+... +.|+ +..|+..+. ++.|.+||+.+
T Consensus 283 ~~~~~~~~~~~~~l~~~d~~~~~~---~-----~~~~l~~~~~~~~~~-~~~d-g~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 283 VITSSEGTDPVNTVHVARVTNGKI---G-----PVTALIPDLKAQWDF-VDGV-GDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEEECTTCSCCEEEEEEEETTEE---C-----CCEEEECSSSSCEEE-EEEE-TTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEEEccCCCcceEEEEECCCCCC---c-----ccEEecCCCCceEEE-Eecc-CCEEEEEECCCCCCCEEEEEeCCC
Confidence 7665443 789998875410 0 011111222333333 3477 777666654 34588998875
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.25 E-value=2.8e-05 Score=50.97 Aligned_cols=107 Identities=9% Similarity=-0.065 Sum_probs=71.1
Q ss_pred cCCCeEEEeeC-C----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-------
Q psy14817 3 QTGSRLATCSD-D----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------- 70 (138)
Q Consensus 3 ~~~~~l~t~s~-d----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------- 70 (138)
|+++.+..... + +.|.+.|... .+.+.++.. ...+ .+.++|+++.++.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t---------------~~vv~~I~v-G~~P--gia~SpDgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST---------------GRILGMTDG-GFLP--HPVAAEDGSFFAQASTVFERIA 143 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT---------------TEEEEEEEE-CSSC--EEEECTTSSCEEEEEEEEEETT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC---------------CEEEEEEEC-CCCC--ceEECCCCCEEEEEeccccccc
Confidence 45554444433 3 6999999643 355666665 3444 899999999666654
Q ss_pred ---CCCcEEEEeccCCCCCCceeeeeeeeeeecc------cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA------HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.++|....+ ....+... .......+.++|+ +++++.++. ++.|.+.|+.+.+
T Consensus 144 ~G~~~~~VsviD~~t~~---------vv~~I~v~g~~r~~~g~~P~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFL---------PIADIELPDAPRFLVGTYQWMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEEEEECTTTCC---------EEEEEEETTCCCCCBSCCGGGSEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred cCCCCCEEEEEECCCCc---------EEEEEECCCccccccCCCcceEEEcCC-CCEEEEEecCCCCeEEEEECCCCe
Confidence 36689999998765 11111111 1134567899999 888888774 5789999998764
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.24 E-value=0.0001 Score=45.23 Aligned_cols=105 Identities=9% Similarity=0.018 Sum_probs=69.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|..+|.. . . .. ...... ....+.++++.+++.++++...++.|..++..
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~-g-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKK-G-G------------FT-EYPLPQ-PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-S-C------------EE-EEECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEEecCCCeEEEECCC-C-C------------eE-EecCCC-CCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 4677777777667888888853 1 1 01 122222 24568899999999887777667889988876
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+. ............+..+.+.++ ++++++...++.|..+|.
T Consensus 134 -g~---------~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 134 -GT---------IYEYDLPNKGSYPAFITLGSD-NALWFTENQNNSIGRITN 174 (300)
T ss_dssp -SC---------EEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT
T ss_pred -CC---------EEEccCCCCCCCceeEEECCC-CCEEEEecCCCeEEEECC
Confidence 33 111111123456788999988 777666666778888876
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.24 E-value=4.4e-05 Score=47.55 Aligned_cols=94 Identities=12% Similarity=-0.038 Sum_probs=60.6
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|+ ++++...++.|..|+... . ...+.. +...+..+.++++|.++++...++.|..|+
T Consensus 52 ~~~~g~~l~~~d~~~~~i~~~~~~g--~---------------~~~~~~-~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 52 WWEAQRTLVWSDLVGRRVLGWREDG--T---------------VDVLLD-ATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTS--C---------------EEEEEE-SCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCC--C---------------EEEEeC-CCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 467887 677888889999998521 1 122223 455788999999999776665667899998
Q ss_pred ccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~ 121 (138)
.. +. .. ....... .....++.+.+.++ +.++++
T Consensus 114 ~~-g~----~~---~~~~~~~~~~~~~~~~i~~d~d-G~l~~t 147 (305)
T 3dr2_A 114 AD-GQ----AH---LLVGRYAGKRLNSPNDLIVARD-GAIWFT 147 (305)
T ss_dssp TT-SC----EE---EEECEETTEECSCCCCEEECTT-SCEEEE
T ss_pred CC-CC----EE---EEEeccCCCccCCCCCEEECCC-CCEEEe
Confidence 75 32 00 0111111 11245778999998 888876
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.23 E-value=3.3e-05 Score=48.15 Aligned_cols=108 Identities=6% Similarity=-0.002 Sum_probs=64.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeEEE----eeC----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLIAT----ACG---- 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~s----~~~---- 71 (138)
++++|+++++...++.|.+|+... . ...+. ...+.....+..+.+.++|.++++ |..
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~g--~------------~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDADG--Q------------AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS--C------------EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred ECCCCCEEEEECCCCEEEEECCCC--C------------EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 357888777666667888888521 1 11111 112211234678999999998776 332
Q ss_pred ---------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC------CcEEEEEcCC
Q psy14817 72 ---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD------GDVKLWQIKL 135 (138)
Q Consensus 72 ---------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~v~~wd~~~ 135 (138)
.+.|..++...+. ..... .....+.++|+|+ +..|+.+... +.|..|++..
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~----------~~~~~--~~~~p~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSP----------LQRMA--DLDHPNGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCC----------CEEEE--EESSEEEEEECTT-SSEEEEEECCC---CCCEEEEEEEET
T ss_pred ccccccccCCCeEEEEcCCCCc----------EEEEe--cCCCCcceEEcCC-CCEEEEEecCCcCCCCCEEEEEEecC
Confidence 2346666654443 11111 2235678999999 8877666554 6899998754
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.20 E-value=0.00012 Score=45.34 Aligned_cols=81 Identities=6% Similarity=0.012 Sum_probs=52.3
Q ss_pred cCeEEEEEe----cCCCe-EEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccc-cceeEEEEccCCCCEEEEEeCC
Q psy14817 52 RTIYDISWC----HLTDL-IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 52 ~~v~~v~~~----~~~~~-~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d 125 (138)
.....++++ +++.. +++...++.|.+|++.... ...... .......+. ..+..+++.++ ++++++...+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g---~~~~~~-~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~ 246 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA---KIENKK-VWGHIPGTHEGGADGMDFDED-NNLLVANWGS 246 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT---EEEEEE-EEEECCCCSSCEEEEEEEBTT-CCEEEEEETT
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC---ccccce-EEEECCCCCCCCCCceEECCC-CCEEEEEcCC
Confidence 356789999 99864 4554567889999976211 000000 111111222 45778999998 8888888788
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
+.|.+||.++++
T Consensus 247 ~~i~~~d~~~g~ 258 (314)
T 1pjx_A 247 SHIEVFGPDGGQ 258 (314)
T ss_dssp TEEEEECTTCBS
T ss_pred CEEEEEcCCCCc
Confidence 899999987443
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.18 E-value=3.9e-05 Score=49.65 Aligned_cols=106 Identities=12% Similarity=0.050 Sum_probs=64.6
Q ss_pred CccCCCeEEEee----------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC------ccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH------GRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s----------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~v~~~~~~~ 64 (138)
+||+|+++..++ .++.|.+||.... +.+.++.... ......+.++|+|+
T Consensus 85 ~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---------------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 85 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---------------LPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---------------CEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred ECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---------------eEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 589999877665 3678999997543 2244432100 12455789999999
Q ss_pred eEEEeeC--CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 65 LIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 65 ~~~s~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+++.+.. ++.|.++|+...+ ....+.... . ....|...+.+++.+.||++.+.++..
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~---------vv~tI~v~g---~--~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKA---------FKRMLDVPD---C--YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTE---------EEEEEECCS---E--EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEEEEcCCCCeEEEEECCCCc---------EEEEEECCC---c--ceeecCCCceeEEECCCCCEEEEECCC
Confidence 8777764 6789999998765 111111111 1 112233245566777777777777654
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.17 E-value=0.00011 Score=47.91 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=67.6
Q ss_pred CccCCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++.|+.+..++ .|.+++...... ...+..+.......+.+++++|+...|+.+..++.|+.|
T Consensus 178 ~~~~g~~l~~~d~~~~~~I~~~d~~~~~~------------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~ 245 (409)
T 3hrp_A 178 VTKDKQRVYSIGWEGTHTVYVYMKASGWA------------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRF 245 (409)
T ss_dssp ECTTSSEEEEEBSSTTCEEEEEEGGGTTC------------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEE
T ss_pred EecCCCcEEEEecCCCceEEEEEcCCCce------------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEE
Confidence 467888888887766 677777533211 011211111134567889999955544446667889999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccc--eeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQD--VNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+..... ....... ........ ...++|+|+.+.++++-..++.|+.|+...
T Consensus 246 d~~~~~----~~~~~~~--~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 246 NVKTQE----VTLIKQL--ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp ETTTCC----EEEEEEC--CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred ECCCCC----EEEEecc--cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 987543 0000000 01111111 238999996366667767788899988653
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.11 E-value=5e-07 Score=58.02 Aligned_cols=63 Identities=8% Similarity=0.028 Sum_probs=37.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++..+++++.|+.|..||..... .+..+.. ..+.+..+..++..+++++.|+.|+.||...+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~---------------~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS---------------IKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC---------------EEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCC---------------EEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCC
Confidence 57789999999999999965432 2333332 23333334456777888889999999998765
Q ss_pred C
Q psy14817 84 A 84 (138)
Q Consensus 84 ~ 84 (138)
+
T Consensus 70 ~ 70 (369)
T 2hz6_A 70 E 70 (369)
T ss_dssp C
T ss_pred c
Confidence 4
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.02 E-value=0.0007 Score=42.64 Aligned_cols=101 Identities=10% Similarity=0.039 Sum_probs=61.2
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccC-CC-CCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYK-PG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+++.+ ++.+.++.|.+|++.. .. . ....+.+..+.. .......+.+.++|.++++...++.|..
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~---------~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLP---------TGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCB---------SSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCc---------ccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 47888755 4555678999999741 11 1 001122333333 3445678999999987777666778999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEEEEEe
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCS 123 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~ 123 (138)
|+.. +. ...........+++++|. ++ +..|+.++
T Consensus 256 ~d~~-g~----------~~~~i~~~~~~~~~~af~g~d-~~~L~vt~ 290 (326)
T 2ghs_A 256 YDTD-GN----------HIARYEVPGKQTTCPAFIGPD-ASRLLVTS 290 (326)
T ss_dssp ECTT-CC----------EEEEEECSCSBEEEEEEESTT-SCEEEEEE
T ss_pred ECCC-CC----------EEEEEECCCCCcEEEEEecCC-CCEEEEEe
Confidence 9873 33 112222334568999998 77 66554433
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.99 E-value=0.00016 Score=45.87 Aligned_cols=123 Identities=10% Similarity=-0.074 Sum_probs=68.9
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-----CC
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-----DD 73 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-----d~ 73 (138)
++|+|+.+++.. .++.++||.+. ...... .+... ..... +...+.++++++++.++++-.. +.
T Consensus 24 ~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~--~p~~~------~~~~~-~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 24 LTPDGRLFLSLHQFYQPEMQVAELT-QDGLIP--FPPQS------GNAII-TFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp ECTTSCEEEEECGGGCCSCSEEEEE-TTEEEE--SCCCC------SSCCC-CCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred ECCCCCEEEEeCCCCCCceEEEEEC-CCCeec--CCCcc------cCccc-ceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 467899998864 23436666654 111100 00000 01112 4568899999999876665433 56
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~~ 137 (138)
.|.+||+..+. ......... ....+...+..+++.++.+..+++-. .++.|.+||+.+++
T Consensus 94 ~i~~~d~~tg~---~~~~~~~~~-~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 94 KLVAWDTLNNQ---LSRVIYLPP-PITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEEEEETTTTE---EEEEEECCT-TTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred eEEEEECCCCe---EEEEEECCh-hhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 89999987654 000000000 00112345688999986244555555 67889999987653
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.95 E-value=4.7e-07 Score=58.16 Aligned_cols=104 Identities=6% Similarity=0.011 Sum_probs=47.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeE-EEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++..+++++.|+.|+.||...... +..+.......+. ...+. .+..+++++.++.+..||..
T Consensus 47 ~~g~~~v~~s~dg~l~a~d~~tG~~---------------~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~ 110 (369)
T 2hz6_A 47 VEEPAFLPDPNDGSLYTLGSKNNEG---------------LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLL 110 (369)
T ss_dssp ---CCEEECTTTCCEEEC-----CC---------------SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC
T ss_pred cCCCEEEEeCCCCEEEEEECCCCce---------------eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECC
Confidence 4567888888999999999754322 1222210000000 00001 23456677788999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++ ..-....+. ...++|+ +..+++++.|+.|+.||.++++
T Consensus 111 tG~----------~~w~~~~~~----~~~~~p~-~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 111 TGE----------KQQTLSSAF----ADSLSPS-TSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp -------------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CCc----------EEEEecCCC----ccccccc-CCEEEEEecCCEEEEEECCCCC
Confidence 776 111111111 1334566 7888889999999999998876
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.91 E-value=0.00025 Score=46.55 Aligned_cols=69 Identities=6% Similarity=0.144 Sum_probs=49.9
Q ss_pred EEEecCCCeEEEeeC----------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEe-C
Q psy14817 57 ISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS-D 124 (138)
Q Consensus 57 v~~~~~~~~~~s~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~ 124 (138)
+.+++++..++.... .+.|.+.|....+ ....+. -....+.+.|+|+ ++ .++++. .
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---------vv~~I~--vg~~P~gia~spD-g~~~lyv~n~~ 391 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---------RINKIE--LGHEIDSINVSQD-AEPLLYALSAG 391 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEEE--EEEEECEEEECCS-SSCEEEEEETT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---------EEEEEE--CCCCcCeEEEccC-CCEEEEEEcCC
Confidence 678999885555432 3469999998776 222222 1235889999999 77 888887 5
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
++.|.++|..+.+
T Consensus 392 s~~VsVID~~t~k 404 (426)
T 3c75_H 392 TQTLHIYDAATGE 404 (426)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999998765
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.90 E-value=0.00015 Score=46.74 Aligned_cols=101 Identities=10% Similarity=-0.146 Sum_probs=66.3
Q ss_pred CeEEEeeCCC----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee----------C
Q psy14817 6 SRLATCSDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----------G 71 (138)
Q Consensus 6 ~~l~t~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----------~ 71 (138)
+.+++-..++ .|.+.|.. ..+.+.++.. ...+ .+.++|+++.++.+. .
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~---------------t~~v~~~i~v-G~~P--~i~~spDg~~lyVan~~~~r~~~G~~ 94 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAG---------------CGVTLGHSLG-AFLS--LAVAGHSGSDFALASTSFARSAKGKR 94 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETT---------------TTEEEEEEEE-CTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred eEEEECCccCCccceEEEEECC---------------CCeEEEEEeC-CCCC--ceEECCCCCEEEEEcccccccccCCC
Confidence 3455555555 77788853 3355677765 3444 799999999766665 3
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecc--c----ccceeEEEEccCCCCEEEEEeC--CCcEEE--EEcC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRA--H----NQDVNCVAWNPVVPGMLASCSD--DGDVKL--WQIK 134 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~~~~~~~l~~~~~--d~~v~~--wd~~ 134 (138)
++.|.+||+...+ ....+..+ . ......+.++|+ +++++.+.. +..+.+ +|..
T Consensus 95 ~~~VsviD~~T~~---------vv~~I~v~~~~~~~~g~~P~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 95 TDYVEVFDPVTFL---------PIADIELPDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEEEEECTTTCC---------EEEEEEETTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTE
T ss_pred CCEEEEEECCCCC---------EEEEEECCCccccccCCCcceEEEcCC-CCEEEEEccCCCCeEEEEEEchh
Confidence 6789999999876 12221111 0 134568999999 888887764 356877 7764
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.89 E-value=0.00037 Score=48.37 Aligned_cols=53 Identities=8% Similarity=0.112 Sum_probs=34.3
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|..||+..++ ..+. ..+...++...+... +..++.++.|+.+++||.++++
T Consensus 457 g~l~A~D~~tG~-----~~W~------~~~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVAQK-----AAWS------VEHVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTTTE-----EEEE------EEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCc-----EEee------cCCCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCc
Confidence 567777776554 1111 122233444445556 7788888999999999999876
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.84 E-value=0.00093 Score=42.09 Aligned_cols=77 Identities=5% Similarity=-0.007 Sum_probs=48.6
Q ss_pred cCeEEEEEecCCCeE-EEeeCCCcEEEEecc--CC-CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 52 RTIYDISWCHLTDLI-ATACGDDAIRIFKEN--PE-AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
.....++|+|++..+ ++...++.|.+|++. .+ . ......+ .........+..+.+.++ +.+.++...++.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~~~~~----~~~~~~~~~p~gi~~d~~-G~lwva~~~~~~ 252 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGKAEVF----IDSTGIKGGMDGSVCDAE-GHIWNARWGEGA 252 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSCCEEE----EECTTSSSEEEEEEECTT-SCEEEEEETTTE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccCceEE----EECCCCCCCCCeeEECCC-CCEEEEEeCCCE
Confidence 356789999999855 444556789999986 32 1 0011111 111122345677888888 777777666778
Q ss_pred EEEEEcC
Q psy14817 128 VKLWQIK 134 (138)
Q Consensus 128 v~~wd~~ 134 (138)
|..||..
T Consensus 253 v~~~d~~ 259 (326)
T 2ghs_A 253 VDRYDTD 259 (326)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999874
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.80 E-value=0.0014 Score=45.60 Aligned_cols=114 Identities=7% Similarity=-0.054 Sum_probs=62.6
Q ss_pred CccCCCeEEEeeCCCc-------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE
Q psy14817 1 MIQTGSRLATCSDDAT-------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 67 (138)
|+ ||+.|+.++.+.. |++|++...... -..+......+...+..+.|+|++++++
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-----------~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED-----------DRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG-----------CEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc-----------ceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 56 8888888887743 888887543221 0222221110233567899999999654
Q ss_pred E-eeC---CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---CcEEEEEcCCC
Q psy14817 68 T-ACG---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLE 136 (138)
Q Consensus 68 s-~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~v~~wd~~~~ 136 (138)
. ... ...|+++++...... ...+ ..+....... ++++...+++....+ +.|..+|+.++
T Consensus 250 ~~~~~~~~~~~i~~~d~~~~~~~--------~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 250 ISAANSTSGNRLYVKDLSQENAP--------LLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp EEEESSSSCCEEEEEETTSTTCC--------CEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred EEEccCCCCcEEEEEECCCCCCc--------eEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 3 332 247889988754300 1111 1233333333 555524444555443 56888887654
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.78 E-value=0.00057 Score=47.59 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=22.5
Q ss_pred EEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 110 AWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 110 ~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+... +.+++.++.|+.|+.||.++++
T Consensus 481 ~~~ta-gglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 481 TLSTA-GNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cceEC-CCEEEEECCCCcEEEEECCCCc
Confidence 44445 7888899999999999999886
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.75 E-value=0.0032 Score=41.75 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=70.1
Q ss_pred CccCCCeEEEee-------------------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEE-
Q psy14817 1 MIQTGSRLATCS-------------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISW- 59 (138)
Q Consensus 1 ~s~~~~~l~t~s-------------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~- 59 (138)
|+|+++.+++.. .+.+|.+||+... +.+.++... .......++|
T Consensus 195 ~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~---------------k~~~tI~vg~~g~~P~~i~f~ 259 (462)
T 2ece_A 195 WNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR---------------KRIHSLTLGEENRMALELRPL 259 (462)
T ss_dssp EETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---------------EEEEEEESCTTEEEEEEEEEC
T ss_pred ECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC---------------cEeeEEecCCCCCccceeEee
Confidence 478888888874 4789999997432 334555441 1134456666
Q ss_pred -ecCCCeEEEee------CCCcEEEEeccCCCCCCce-eeeeeeeeeecc-----------cccceeEEEEccCCCCEEE
Q psy14817 60 -CHLTDLIATAC------GDDAIRIFKENPEAGDSDM-VSFDLVHTEHRA-----------HNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 60 -~~~~~~~~s~~------~d~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~ 120 (138)
+|+++++..++ .+++|.+|....+. ... ............ .......+.++++ +++|.
T Consensus 260 ~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D-GrfLY 336 (462)
T 2ece_A 260 HDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK--WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD-DKFLY 336 (462)
T ss_dssp SSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT-SCEEE
T ss_pred ECCCCCEEEEEEeeeccCCCceEEEEEecCCc--eeEEEEEeCCCccccccccccccccccCCCceeEEEECCC-CCEEE
Confidence 99998665554 56688887765321 000 000000000000 0245788999999 88877
Q ss_pred EEeC-CCcEEEEEcC
Q psy14817 121 SCSD-DGDVKLWQIK 134 (138)
Q Consensus 121 ~~~~-d~~v~~wd~~ 134 (138)
.++. ++.|.++|+.
T Consensus 337 VSnrg~d~VavfdV~ 351 (462)
T 2ece_A 337 LSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTTEEEEEECS
T ss_pred EEeCCCCEEEEEEec
Confidence 6665 7889999985
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.70 E-value=0.002 Score=39.66 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=68.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC----CCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG----HHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
+++|+.++.+..++.|.++|.... +.+..+.- ..-..++.+.|. ++..++....++.|.+
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~---------------~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTF---------------KLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTC---------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EECCCEEEEECCCCeEEEEECCCC---------------cEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 467766666667888888886432 22333322 011246778887 6666666556788999
Q ss_pred EeccCCCCCCceeeeeeeeeeecc------------cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRA------------HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.|...++ ........ .....+.++++|+....++++....++.+.++..
T Consensus 177 ID~~tg~---------V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 177 ISAKDGT---------LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EETTTCC---------EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EECCCCc---------EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9998876 11111111 1136689999998445667777788888887754
No 229
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.67 E-value=0.00033 Score=49.17 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=60.0
Q ss_pred Cc-cCCCeEEEeeC-C----CcEEEeeccCC-CCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC-
Q psy14817 1 MI-QTGSRLATCSD-D----ATVKIWKEYKP-GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 72 (138)
Q Consensus 1 ~s-~~~~~l~t~s~-d----~~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d- 72 (138)
|| |||++||-+.. + ..|+++|+... ... . ..+.. ....+.|+|+++.|+-...+
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---------~-----~~~~~----~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI---------A-----DKVSG----TNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC---------C-----CCEEE----ECSCCEECSSTTEEEEEEECT
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC---------C-----ccccC----ceeeEEEecCCCEEEEEEECC
Confidence 57 99998884432 2 25999997554 210 0 00111 12367899999865555444
Q ss_pred ----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCC
Q psy14817 73 ----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLE 136 (138)
Q Consensus 73 ----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~ 136 (138)
..|..+++.... .... .+. ..........+.|+|+ +++|+..+ ....|.++|+.++
T Consensus 243 ~~~~~~v~~~~lgt~~---~~~~--lv~--~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQ---SEDV--CLY--EEHNPLFSAFMYKAAD-TNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TCCEEEEEEEETTSCG---GGCE--EEE--ECCCTTCEEEEEECTT-SSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCCEEEEEECCCCc---hhcE--EEE--ecCCCceEEEEEECCC-CCEEEEEecCCCCceEEEEECCCC
Confidence 246666665432 0000 010 0112234567889999 88776554 2345777787654
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.62 E-value=0.0023 Score=39.45 Aligned_cols=107 Identities=6% Similarity=-0.107 Sum_probs=60.8
Q ss_pred CccCCCeEEEeeC--CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i 77 (138)
|++++.++++.+. +..|++.|+... +.+..+..........+.+. +. .+++.-.++.+.+
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg---------------~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTG---------------KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTC---------------CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEE
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCC---------------CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEE
Confidence 4566766666553 679999997543 22444332112223345554 44 4455557789999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|....+ .......+ ...-+. +.++ +..++.+..++.|.++|..+.+
T Consensus 91 iD~~t~~---------v~~~i~~g-~~~g~g--lt~D-g~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 91 YDRRTLS---------NIKNFTHQ-MKDGWG--LATD-GKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EETTTTE---------EEEEEECC-SSSCCE--EEEC-SSSEEEECSSSEEEEECTTTCC
T ss_pred EECCCCc---------EEEEEECC-CCCeEE--EEEC-CCEEEEECCCCeEEEEECCCCc
Confidence 9998654 12222112 111233 4456 6656556678899999987654
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.61 E-value=0.0049 Score=40.86 Aligned_cols=113 Identities=9% Similarity=0.051 Sum_probs=70.8
Q ss_pred cCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec------CCCccCeEEEEEecCCCeEEEeeCC---
Q psy14817 3 QTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GHHGRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 3 ~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
++++ +++++..+..|.++|+...... -+...++. .........+...|+| +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-----------p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g 160 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-----------PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG 160 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-----------CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-----------ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC
Confidence 5565 4566778899999997543221 13344442 0012245678888999 76666555
Q ss_pred ---CcEEEEeccCCCCCCceeeeeeeeeeecc-c-ccceeEEEEccCCCCEEEEEe-------------------CCCcE
Q psy14817 73 ---DAIRIFKENPEAGDSDMVSFDLVHTEHRA-H-NQDVNCVAWNPVVPGMLASCS-------------------DDGDV 128 (138)
Q Consensus 73 ---~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~-------------------~d~~v 128 (138)
+.+.+.|....+ ...+.... . ...-..+.|+|+ ++.+++.. .+..|
T Consensus 161 ~~~g~v~vlD~~T~~---------v~~~~~~~~~~~~~~Yd~~~~p~-~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 161 EGPGGILMLDHYSFE---------PLGKWEIDRGDQYLAYDFWWNLP-NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp CSCCEEEEECTTTCC---------EEEECCSBCTTCCCCCCEEEETT-TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred CCCCeEEEEECCCCe---------EEEEEccCCCCccccceEEECCC-CCEEEEccCcCccccccccchhhhhhccCCEE
Confidence 679999988766 22222111 1 122345788999 88888875 36889
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
.+||+.+++
T Consensus 231 ~v~D~~~~k 239 (462)
T 2ece_A 231 HFWDLRKRK 239 (462)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999998653
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.50 E-value=0.0063 Score=38.54 Aligned_cols=114 Identities=6% Similarity=0.011 Sum_probs=61.4
Q ss_pred ccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecCCC-eEEEee
Q psy14817 2 IQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTD-LIATAC 70 (138)
Q Consensus 2 s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~~~-~~~s~~ 70 (138)
.++|+++++-.. +..|.+||+... +.+..+.. .+...+..+++++++. .+++-.
T Consensus 75 d~~g~L~v~D~g~~~~~~~~i~~~d~~tg---------------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 75 DGNGIVWMLDNGNQSKSVPKLVAWDTLNN---------------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp CSSSEEEEEECHHHHTSCCEEEEEETTTT---------------EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred cCCCcEEEEcCCCCcCCCCeEEEEECCCC---------------eEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 466776665543 578888996432 22222221 1234568899998654 445544
Q ss_pred ---CCCcEEEEeccCCCCCC------c-ee---eeeeeeeee---cc------cccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 71 ---GDDAIRIFKENPEAGDS------D-MV---SFDLVHTEH---RA------HNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~------~-~~---~~~~~~~~~---~~------~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
.++.|.+||+..+.... . .+ .+..--..+ .. ....+..++++|+ ++.|+.+..++.
T Consensus 140 ~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-g~~ly~~~~~~~- 217 (343)
T 2qe8_A 140 APDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-NEWLYLSPMHST- 217 (343)
T ss_dssp CSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-SCEEEEEESSCS-
T ss_pred ccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC-CCEEEEEeCCCC-
Confidence 57789999987553000 0 00 000000000 00 0124688999999 888887776653
Q ss_pred EEEE
Q psy14817 129 KLWQ 132 (138)
Q Consensus 129 ~~wd 132 (138)
++|.
T Consensus 218 ~l~~ 221 (343)
T 2qe8_A 218 SMYR 221 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4443
No 233
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.49 E-value=0.0033 Score=43.47 Aligned_cols=110 Identities=8% Similarity=-0.000 Sum_probs=63.2
Q ss_pred CCCeEEEeeCCC-----------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-
Q psy14817 4 TGSRLATCSDDA-----------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG- 71 (138)
Q Consensus 4 ~~~~l~t~s~d~-----------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~- 71 (138)
+++.++.|+.+. .+.+||.... .|..+......+.....++++..++.+++.|+.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-------------~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-------------IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-------------CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCC-------------cEEeCcccCCCCCCccccccCCCCCCEEEeCCCC
Confidence 677777776543 4667776432 233333332212233345677788998888874
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CC-----CcEEEEEcCCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DD-----GDVKLWQIKLE 136 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----~~v~~wd~~~~ 136 (138)
+..+.+||..... +..... . .....-..+...++ +.+++.|+ .+ ..+.+||..++
T Consensus 264 ~~~v~~yd~~t~~-------W~~~~~-~-~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 264 AKKTSLYDSSSDS-------WIPGPD-M-QVARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp TTCEEEEEGGGTE-------EEECCC-C-SSCCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CCceEEecCcCCc-------eeECCC-C-CccccccceEEecC-CeEEEEeCcccCCcccccceEeCCCCC
Confidence 4579999987543 111111 1 11111233455567 88888888 34 56889998764
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.44 E-value=0.0088 Score=38.61 Aligned_cols=69 Identities=7% Similarity=-0.040 Sum_probs=47.8
Q ss_pred EEEecCCCeEEEeeC---------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEe-CC
Q psy14817 57 ISWCHLTDLIATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS-DD 125 (138)
Q Consensus 57 v~~~~~~~~~~s~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~d 125 (138)
+.+++++..++.+.. +..+.++|+...+ ....+..+ .....+.++|+ +. .+++.. .+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg--~~p~gi~~s~D-g~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNG--HDSDAIIAAQD-GASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEE--EEECEEEECCS-SSCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---------EEEEEECC--CCcceEEECCC-CCEEEEEccCCC
Confidence 679999986654422 2346699998776 22222212 26889999999 66 566666 59
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
+.|.++|+.+.+
T Consensus 337 ~~VsVID~~t~k 348 (368)
T 1mda_H 337 EVLDIYDAASDQ 348 (368)
T ss_dssp TEEEEEESSSCE
T ss_pred CeEEEEECCCCc
Confidence 999999998765
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.35 E-value=0.0032 Score=38.63 Aligned_cols=103 Identities=4% Similarity=-0.023 Sum_probs=58.8
Q ss_pred CCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
++.++.+.+.+| .|+++|+.... .+..+.. ..........+++. .+...-.++.+.++|.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgk---------------v~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGK---------------TLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCC---------------EEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCc---------------EEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 566777777776 89999975442 2444433 12333332333455 3444446889999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 115 ~t~~----------~~~ti~~-~~eG~glt--~d-g~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 115 RNLR----------QVRSFNY-DGEGWGLT--HN-DQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp TTCC----------EEEEEEC-SSCCCCEE--EC-SSCEEECCSSSEEEEECTTTCS
T ss_pred ccCc----------EEEEEEC-CCCceEEe--cC-CCEEEEECCCCeEEEEcCCCCe
Confidence 8766 2222211 11223444 45 5555555557789999887643
No 236
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.35 E-value=0.0083 Score=39.55 Aligned_cols=123 Identities=12% Similarity=0.095 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecCC---CeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLT---DLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~~---~~~~s~~~d 72 (138)
+||+|++||..+ +..|.|-.+........ .... ....+ .+.+.- .....|..+.|+|-+ ..+++-..|
T Consensus 73 lSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~-~~~~-~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 73 SSTSGDLLCLFN-DNEIFVMEVPWGYSNVE-DVSI-QDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp ECTTSSEEEEEC-SSEEEEEECCTTCSCCC-CHHH-HHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred ECCCCCEEEEec-CCeEEEEEecCccccCc-cccc-ccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC
Confidence 379999999885 46888888753211100 0000 00011 111111 124679999999976 489999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEe--CCCcEEE
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCS--DDGDVKL 130 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~ 130 (138)
+.|++||+......+. ........+ ......|.+++|..+ +-.|...+ .+|.|.-
T Consensus 149 ~~Ir~yDl~~s~~~P~--~L~k~~~~fg~d~~~~ev~S~~Fg~~-~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 149 DTITMFDILNSQEKPI--VLNKPNNSFGLDARVNDITDLEFSKD-GLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp SCEEEEETTCTTSCCE--EESCCCSEEESCSSCCCEEEEEECTT-SSCEEEEECTTSCEEEE
T ss_pred CEEEEEEcccCCCCCc--chhccccccCCCcccceEEEEEEcCC-CcEEEEEecCCCCCEEE
Confidence 9999999997442111 110000000 122257788899887 76666644 6676654
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.31 E-value=0.0035 Score=42.86 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=51.5
Q ss_pred CeEEEEEecCCCeE-EEeeCCCcEEEEeccCCC----CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 53 TIYDISWCHLTDLI-ATACGDDAIRIFKENPEA----GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 53 ~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
...++.++|||+++ +++..+.+|.++|+.... +... +... .... ..-....+.++|+|+ +...++.-.|++
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~-~~~~-v~~~-v~vG~gP~h~aF~~d-G~aY~t~~ldsq 353 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD-PRSA-VVAE-PELGLGPLHTAFDGR-GNAYTSLFLDSQ 353 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC-GGGG-EEEC-CBCCSCEEEEEECTT-SEEEEEETTTTE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC-cccc-eEEE-cCCCCCcceEEECCC-CeEEEEEecCCc
Confidence 45689999999955 445567899999998531 0000 0000 1111 123356889999999 755556667999
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|.+||+..
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 99999864
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.28 E-value=0.0086 Score=36.87 Aligned_cols=101 Identities=9% Similarity=-0.002 Sum_probs=60.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE-ecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
++.++.+.+.+|.|+++|+..... +.. +.. ....-.+.. ++. ++...-.++.+.++|..
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv---------------~~~~l~~--~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQP---------------VWMERLG--NIFAEGLAS--DGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSC---------------SEEEECT--TCCEEEEEE--CSSCEEEEESSSCEEEEEETT
T ss_pred CCEEEEEcCCCCEEEEEECCCCcE---------------EeEECCC--CcceeEEEE--eCCEEEEEEccCCEEEEEECC
Confidence 356778888899999999865433 222 222 112223444 444 44445578899999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 125 Tl~----------~~~ti~~-~~eGwGLt--~D-g~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 125 PPQ----------RERTTRY-SGEGWGLC--YW-NGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp TTE----------EEEEEEC-SSCCCCEE--EE-TTEEEEECSSSEEEEECTTTCC
T ss_pred cCc----------EEEEEeC-CCceeEEe--cC-CCEEEEECCCCEEEEEcCCCCe
Confidence 765 2222211 12224454 45 6666666678899999987654
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.14 E-value=0.0033 Score=43.01 Aligned_cols=131 Identities=14% Similarity=0.046 Sum_probs=70.4
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|||++++ ++..+.+|.++|+........ ..-......+..+.. ......++|+++|..+.+.-.|+.|.+|+
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~---~~l~~~~~v~~~v~v--G~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY---ENADPRSAVVAEPEL--GLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGGGHHHHHH---SCCCGGGGEEECCBC--CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEeCCCCCeEEEEECcccccccc---cccCcccceEEEcCC--CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 589998655 555788999999864310000 000111122333332 45678899999995455666789999999
Q ss_pred ccCCC----C-CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---CCcE----------EEEEcCCCC
Q psy14817 80 ENPEA----G-DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---DGDV----------KLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v----------~~wd~~~~~ 137 (138)
+.... + .......+.......+|...-..+..+|+ +++|++.+. |+.+ .++|+..++
T Consensus 359 i~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D-Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 359 IEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT-NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp HHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC-SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred hhHhhhhhcccccceeEEEeecccccccceeccceEeCCC-CCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 98621 0 00111111111000122212223345788 999988864 4432 677776554
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.10 E-value=0.015 Score=41.03 Aligned_cols=70 Identities=9% Similarity=-0.085 Sum_probs=40.0
Q ss_pred CccCCCeEEEeeCCC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---C
Q psy14817 1 MIQTGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---D 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---d 72 (138)
|+|||+.|+..+.|. .|.++++..... .-..+..-. .......+.|+|++++|+..+. .
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-----------~~~lv~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~ 294 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-----------EDVCLYEEH--NPLFSAFMYKAADTNTLCIGSQSPET 294 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-----------GCEEEEECC--CTTCEEEEEECTTSSEEEEEEECSSC
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCch-----------hcEEEEecC--CCceEEEEEECCCCCEEEEEecCCCC
Confidence 689998887776652 455566533211 001222211 2335678899999996655432 2
Q ss_pred CcEEEEeccCC
Q psy14817 73 DAIRIFKENPE 83 (138)
Q Consensus 73 ~~i~i~~~~~~ 83 (138)
..|.++|+...
T Consensus 295 ~~l~~~d~~~~ 305 (751)
T 2xe4_A 295 AEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEESSSC
T ss_pred ceEEEEECCCC
Confidence 34777777654
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.87 E-value=0.021 Score=39.08 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=18.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..++.++.|+.|+.+|.++++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCC
Confidence 5677778999999999998876
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.86 E-value=0.03 Score=34.04 Aligned_cols=102 Identities=7% Similarity=0.003 Sum_probs=57.6
Q ss_pred CCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 5 GSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
+.++.+.+.+| .|+++|+... +.+..+.. ............+. .+...-.++.+.++|..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tg---------------kv~~~~~l--~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETG---------------RILQRAEV--PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTC---------------CEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CEEEEECCCCCCceEEEEECCCC---------------CEEEEEeC--CCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 55666666654 8999997544 22444433 12222222233344 44445578899999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 94 tl~----------~~~ti~~-~~~Gwglt--~d-g~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 94 TLT----------PRARFRY-PGEGWALT--SD-DSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp TTE----------EEEEEEC-SSCCCEEE--EC-SSCEEEECSSSEEEEECTTTCC
T ss_pred cCc----------EEEEEeC-CCCceEEe--eC-CCEEEEECCCCeEEEEeCCCCe
Confidence 765 2222211 12234555 45 5555555568889999987653
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.81 E-value=0.033 Score=33.82 Aligned_cols=104 Identities=7% Similarity=-0.102 Sum_probs=58.6
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeC--CCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACG--DDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~--d~~i~i~~~~ 81 (138)
+..+++-...+.|.++++..... +.+ ... .......++++|++..+ ++-.. .+.|..+++.
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~-------------~~~--~~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQR-------------RVL--FDT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-------------EEE--ECS-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEcCCCCE-------------EEE--EEC-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 34555555667787777532111 111 111 12457899999976644 44332 3678888776
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCE-EEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d~~v~~wd~~~ 135 (138)
... ..............+++.++ +.. +++-...+.|..+|+..
T Consensus 155 g~~----------~~~~~~~~~~~P~gia~d~~-~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 155 GTN----------RRILAQDNLGLPNGLTFDAF-SSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp SCC----------CEEEECTTCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTE
T ss_pred CCC----------cEEEEECCCCCCcEEEEcCC-CCEEEEEECCCCEEEEEecCC
Confidence 432 11111122345788999987 554 45555567888888754
No 244
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.63 E-value=0.072 Score=35.28 Aligned_cols=82 Identities=11% Similarity=0.178 Sum_probs=54.3
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCc-------eeeeeeeeeee-cccccceeEEEEccCC--CCEEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD-------MVSFDLVHTEH-RAHNQDVNCVAWNPVV--PGMLASC 122 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~~~ 122 (138)
.+..+..+|+|.+++..+. ..|.|..+..+..... ........... .....+|..+.|||-. +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5778999999998888754 4788888884321111 01111111100 0125689999999962 4589999
Q ss_pred eCCCcEEEEEcCC
Q psy14817 123 SDDGDVKLWQIKL 135 (138)
Q Consensus 123 ~~d~~v~~wd~~~ 135 (138)
..|+.|++||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 9999999999875
No 245
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.62 E-value=0.078 Score=36.41 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.++.+|.++++
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCCCC
Confidence 6678889999999999999876
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.57 E-value=0.059 Score=33.51 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=56.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i~ 78 (138)
|+++|+++++-..++.|..|+.... ....+.. .....++++.+++.++++..... .|..+
T Consensus 39 ~~~~g~lyv~d~~~~~I~~~d~~g~----------------~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 39 SAPDGTIFVTNHEVGEIVSITPDGN----------------QQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCC----------------EEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEeCCCCeEEEECCCCc----------------eEEEEeC--CCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 3567887777777888888885321 1111221 24678999999998666554332 35555
Q ss_pred eccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+...+. ..... .........++..+. +..+++-..++.|..+|..
T Consensus 101 d~~~g~----------~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 101 VKSDGT----------VETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp ECTTSC----------EEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETT
T ss_pred cCCCCe----------EEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCC
Confidence 655443 11110 011122233443343 4444444457778877765
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.53 E-value=0.027 Score=39.26 Aligned_cols=53 Identities=6% Similarity=0.107 Sum_probs=32.8
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|.-||+..++ ..+.. ..........+... +.+++.++.|+.|+.||.++++
T Consensus 438 g~l~A~D~~tG~-----~~W~~------~~~~~~~~~~~~t~-gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 438 GALLAWDPVKQK-----AAWKV------PYPTHWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEETTTTE-----EEEEE------EESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ceEEEEeCCCCc-----EEEEc------cCCCCCcCceeEeC-CCEEEEECCcccchhhhhhcCh
Confidence 667777776654 11111 11122222233344 7788889999999999998876
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.53 E-value=0.06 Score=33.13 Aligned_cols=66 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeee-----ecccccceeEEEEccCCCCEEEEEe
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE-----HRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.++.+.|. +|..++..-.+..|.+.|...+. ........... ........+.|++.|+ .+.|+..+
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~-~~~lfVTG 243 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE-HHRLFVTG 243 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCCCEEEEEEETT-TTEEEEEE
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCc---EEEEEECCcCccccccccCcCCceEEEEEcCC-CCEEEEEC
Confidence 34556776 56666666567789998988765 11111000000 0011246789999998 55554444
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.52 E-value=0.043 Score=38.30 Aligned_cols=31 Identities=3% Similarity=0.049 Sum_probs=24.2
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+....+...+.+++.++.|+.+++||...++
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 3344455677778888999999999999877
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.47 E-value=0.062 Score=32.59 Aligned_cols=104 Identities=12% Similarity=-0.027 Sum_probs=59.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~ 83 (138)
+.++++-..++.|..++...... . ..+.. .......+++++++. .+++-...+.|.++++...
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~-------------~--~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEP-------------T--TIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCC-------------E--EEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEECCCCEEEEEecCCCCc-------------E--EEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 34555656677888888643211 1 11222 234678999999765 4555555678999988643
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---CCcEEEEEcCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---DGDVKLWQIKL 135 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~~wd~~~ 135 (138)
. ..............+++.|+ +..|..+.. .+.|..+++..
T Consensus 112 ~----------~~~~~~~~~~~P~~i~vd~~-~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 112 Q----------RRVLFDTGLVNPRGIVTDPV-RGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp S----------CEEEECSSCSSEEEEEEETT-TTEEEEEECCSSSCEEEEEETTS
T ss_pred C----------EEEEEECCCCCccEEEEeeC-CCEEEEEECCCCCcEEEEEecCC
Confidence 2 11111112245688999986 444444433 35777777653
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.44 E-value=0.031 Score=39.12 Aligned_cols=27 Identities=7% Similarity=0.207 Sum_probs=22.7
Q ss_pred EEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 58 SWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 58 ~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+...+.+++.++.|+.++.||.+.++
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceECCCEEEEECCCCcEEEEECCCCc
Confidence 445567788889999999999999887
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.18 E-value=0.096 Score=31.86 Aligned_cols=102 Identities=9% Similarity=0.010 Sum_probs=59.1
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
+++...-.++.+.++|... .+.+.++.. . ..-..+ .+++..++.+..++.|.++|.....
T Consensus 76 ~ly~ltw~~~~v~v~D~~t---------------l~~~~ti~~-~-~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~- 135 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLAT---------------LTPRARFRY-P-GEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQ- 135 (243)
T ss_dssp EEEEEESSSSEEEEEETTT---------------TEEEEEEEC-S-SCCCEE--EECSSCEEEECSSSEEEEECTTTCC-
T ss_pred EEEEEEeeCCEEEEEECCc---------------CcEEEEEeC-C-CCceEE--eeCCCEEEEECCCCeEEEEeCCCCe-
Confidence 3444555688899999533 355666654 2 222344 4567766666667889999988755
Q ss_pred CCceeeeeeeeeeec-ccc---cceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 86 DSDMVSFDLVHTEHR-AHN---QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... .+. ..++-+.|. + +..++..-.+..|.+.|.++++
T Consensus 136 --------~~~~I~V~~~g~~~~~lNeLe~~-~-G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 136 --------QVGSIKVTAGGRPLDNLNELEWV-N-GELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp --------EEEEEECEETTEECCCEEEEEEE-T-TEEEEEETTTTEEEEECTTTCB
T ss_pred --------EEEEEEEccCCcccccceeeEEe-C-CEEEEEECCCCeEEEEECCCCC
Confidence 1111111 111 234455554 3 5555555557788888888765
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.15 E-value=0.15 Score=33.64 Aligned_cols=72 Identities=3% Similarity=-0.107 Sum_probs=46.6
Q ss_pred CeEEEEEec-CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEE
Q psy14817 53 TIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKL 130 (138)
Q Consensus 53 ~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~ 130 (138)
....++++| ++.++++-..++.|..++..... ...............++++|+ ++ ++++-...+.|..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---------~~~~~~~~~~~~P~gia~~pd-G~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---------TTPLFTIQDSGWEFHIQFHPS-GNYAYIVVVNQHYILR 296 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---------EEEEEECSSSSCCEEEEECTT-SSEEEEEETTTTEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEEEcCCCCcceeEEEcCC-CCEEEEEECCCCEEEE
Confidence 356788999 66666666677889999887443 001111122245678999999 88 4555556778888
Q ss_pred EEcC
Q psy14817 131 WQIK 134 (138)
Q Consensus 131 wd~~ 134 (138)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7765
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.14 E-value=0.11 Score=32.22 Aligned_cols=58 Identities=9% Similarity=-0.071 Sum_probs=31.3
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..+..++.++.|..+|.. . +....... ....+.++...+++. +..++.++.|..++..
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g---------------~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-G---------------TEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TEEEEECTTSEEEEECTT-S---------------CEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred CEEEEEecCCEEEEEcCC-C---------------CEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 345556667777777753 1 11222222 223344455555555 4445566778888876
No 255
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.13 E-value=0.13 Score=32.81 Aligned_cols=105 Identities=6% Similarity=0.016 Sum_probs=57.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC--------ccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
.+..+..++.++.|..+|...... +....... ...+.+. ...++..++.++.++.|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~---------------~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l 115 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKE---------------IWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQV 115 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE---------------EEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCce---------------eeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEE
Confidence 345677778888999999644321 22221100 1122221 22245667778888999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+|...++ ..+... ........... . ...++.++.++.|..+|.++++
T Consensus 116 ~a~d~~tG~-----~~W~~~-----~~~~~~~~p~~--~-~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 116 YALNTSDGT-----VAWQTK-----VAGEALSRPVV--S-DGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp EEEETTTCC-----EEEEEE-----CSSCCCSCCEE--E-TTEEEEECTTSEEEEEETTTCC
T ss_pred EEEECCCCC-----EEEEEe-----CCCceEcCCEE--E-CCEEEEEcCCCeEEEEECCCCc
Confidence 999988765 111111 11111111111 1 4567777888899999987765
No 256
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.08 E-value=0.14 Score=32.70 Aligned_cols=57 Identities=9% Similarity=0.082 Sum_probs=34.7
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeE-EEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC-VAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+..++.++.++.+..+|...++ ...........+.. ... . +..|+.++.+|.|..|+
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~----------~~~~~~~~~~~~~~~~~~--~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGR----------FVAQQKVDSSGFQTEPVA--A-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC----------EEEEEECCTTCBCSCCEE--E-TTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCc----------EEEEEecCCCcceeCCEE--E-CCEEEEEeCCCEEEEEe
Confidence 4567777888999999988765 11111111122221 111 2 56778888999999886
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.92 E-value=0.19 Score=33.07 Aligned_cols=76 Identities=16% Similarity=0.260 Sum_probs=42.8
Q ss_pred ccCeEEEEEecCCCeEEEeeC-CC----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 51 GRTIYDISWCHLTDLIATACG-DD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~-d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
......+++++++..++.+.. ++ .+.+.+..... ... ... ........+++.|+++.++++-..+
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~---~~~------~~l-~~~~~p~giavdp~~g~lyv~d~~~ 247 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF---KVI------TEL-TKGQNCNGAETHPINGELYFNSWNA 247 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS---CSE------EEE-EECSSCCCEEECTTTCCEEEEETTT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce---eee------eee-ccCCCceEEEEeCCCCEEEEEECCC
Confidence 456789999999994444433 22 23333332211 000 000 1123457788888436666666667
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
+.|..++...+
T Consensus 248 ~~V~~~~~~~~ 258 (430)
T 3tc9_A 248 GQVFRYDFTTQ 258 (430)
T ss_dssp TEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 88888887643
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.89 E-value=0.16 Score=31.78 Aligned_cols=108 Identities=7% Similarity=-0.084 Sum_probs=59.4
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC--------
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------- 71 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-------- 71 (138)
++|+|+.| ++-+..+.|.++++..... ...+.+.. . .+ ...+++.++|.++++...
T Consensus 192 ~~~dg~~lyv~d~~~~~I~~~~~~~~~~----------~~~~~~~~--~--~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 192 VSADSSFVLVAEFLSHQIVKYWLEGPKK----------GTAEVLVK--I--PN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEESSSTTT----------TCEEEEEE--C--SS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcC----------CccceEEe--C--CC-CCCeEECCCCCEEEEecCcccccccC
Confidence 46778744 4546678898888753211 11122222 1 22 678999999986666543
Q ss_pred --CCcEEEEeccCCCCCCceeeeeeeeeeeccc---ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 72 --DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH---NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 72 --d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.+.|..++.. +. ......... -..+..+.+ .+ +.++++...++.|..+++..
T Consensus 257 ~~~~~v~~~d~~-G~---------~~~~~~~~~g~~~~~~~~~~~-~~-g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GN---------ILEVIPLPPPFAGEHFEQIQE-HD-GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SC---------EEEEEECCTTTTTSCCCEEEE-ET-TEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CC---------EEEEEECCCCCccccceEEEE-eC-CEEEEeecCCCceEEEeccc
Confidence 3557777654 22 111111111 234566665 34 66666666778899888754
No 259
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.79 E-value=0.16 Score=31.48 Aligned_cols=55 Identities=9% Similarity=-0.006 Sum_probs=30.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++. +..++.++.|..+|.. . +.+..+.. ....+.++...+++.+++.. +.|..++
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g---------------~~~~~~~~-~~~~~~~~~~d~~g~l~v~t---~~l~~~d 201 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-G---------------TEKWRFKT-NDAITSAASIGKDGTIYFGS---DKVYAIN 201 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-S---------------CEEEEEEC-SSCCCSCCEECTTCCEEEES---SSEEEEC
T ss_pred CCE-EEEEcCCCEEEEECCC-C---------------CEeEEEec-CCCceeeeEEcCCCEEEEEe---CEEEEEC
Confidence 344 5557777888888853 1 11222222 23345556666666655443 6677777
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.75 E-value=0.2 Score=32.00 Aligned_cols=77 Identities=6% Similarity=0.097 Sum_probs=50.8
Q ss_pred CeEEEEEecCCCeEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
....+...++|...++++.- +.|...+..... ...+.. ...........+.|.++|+ +..|+....++.|.-+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~----~~~~~~-~~~~~~~~~G~nGIv~~pd-g~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKT----VSTFAW-ESGNGGQRPGYSGITFDPH-SNKLIAFGGPRALTAF 211 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCC----EEEEEE-CCCCSSSCCSCSEEEEETT-TTEEEEESSSSSEEEE
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE----Eeeeee-cCCCcccccCcceEEEeCC-CCEEEEEcCCCeEEEE
Confidence 47889999999988888777 776666655322 111110 0000112335779999999 8877777669999999
Q ss_pred EcCC
Q psy14817 132 QIKL 135 (138)
Q Consensus 132 d~~~ 135 (138)
|++.
T Consensus 212 D~~~ 215 (334)
T 2p9w_A 212 DVSK 215 (334)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 9763
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.74 E-value=0.21 Score=34.54 Aligned_cols=22 Identities=14% Similarity=0.075 Sum_probs=19.2
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.|+.+|.++++
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCC
Confidence 6677789999999999999876
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.74 E-value=0.17 Score=31.03 Aligned_cols=123 Identities=7% Similarity=0.027 Sum_probs=65.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe---cCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
+++.++++.-.++.+.++++...... .... ...+ ........-.++|+|.+..+..+.......+|.
T Consensus 79 ~~g~~~vs~E~~~~l~~~~v~~~~~i---------~~~~-~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 79 GDNQFVISDERDYAIYVISLTPNSEV---------KILK-KIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp STTEEEEEETTTTEEEEEEECTTCCE---------EEEE-EEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCee---------eeee-eeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 45666566556678888876433210 0001 1111 111345578999999997666666555556665
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.........................+..++++|..+.+++.......|.++|...
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 55211000111100000000112346789999998666677777777788887654
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.70 E-value=0.22 Score=32.21 Aligned_cols=75 Identities=9% Similarity=-0.084 Sum_probs=45.3
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......++++|.+. ++++-... +.|..+++.... ........-...+.|++.|+.+.++++-...+.|
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----------CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC----------cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 35678999998766 44444344 678887776433 1111112234578899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 271 ~~~d~dG 277 (386)
T 3v65_B 271 ERANLDG 277 (386)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 8877654
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.63 E-value=0.11 Score=36.47 Aligned_cols=74 Identities=11% Similarity=-0.083 Sum_probs=42.8
Q ss_pred cCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.....|+++|.+. ++++-... +.|..+++.... ...+....-...+.|++.|+.+.++++-...+.|.
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~----------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC----------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC----------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 3456788888655 44443222 567777665432 11111122345678999987455555555677788
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
.+++..
T Consensus 566 ~~d~dG 571 (699)
T 1n7d_A 566 SIDVNG 571 (699)
T ss_dssp EECSSS
T ss_pred EEccCC
Confidence 888754
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.54 E-value=0.25 Score=31.56 Aligned_cols=75 Identities=9% Similarity=-0.084 Sum_probs=46.1
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......++++|.+. ++++-... +.|...++.... ........-...+.+++.|+++.++++-...+.|
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----------CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC----------cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 34678999998665 45554444 678888776433 1111112234578899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 228 ~~~~~dG 234 (349)
T 3v64_C 228 ERANLDG 234 (349)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 8888754
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.28 E-value=0.27 Score=30.40 Aligned_cols=102 Identities=10% Similarity=-0.013 Sum_probs=61.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
++++..-.++.+.++|... .+.+.++... ..-..++ +++..++.+..++.|.++|....+
T Consensus 107 ~Ly~ltw~~~~v~V~D~~T---------------l~~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~- 166 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMP---------------PQRERTTRYS--GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA- 166 (268)
T ss_dssp CEEEEESSSCEEEEEETTT---------------TEEEEEEECS--SCCCCEE--EETTEEEEECSSSEEEEECTTTCC-
T ss_pred EEEEEEccCCEEEEEECCc---------------CcEEEEEeCC--CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-
Confidence 4445555688999999533 3556666541 2223443 567777666668889999988755
Q ss_pred CCceeeeeeeeeeec-cc---ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 86 DSDMVSFDLVHTEHR-AH---NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... .+ -..++-+.|. + +.+++..-.+..|.+.|.++++
T Consensus 167 --------v~~~I~V~~~g~~v~~lNeLe~~-d-G~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 167 --------LVGAVQVKLRGQPVELINELECA-N-GVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp --------EEEEEECEETTEECCCEEEEEEE-T-TEEEEEETTCSEEEEECTTTCB
T ss_pred --------EEEEEEeCCCCcccccccccEEe-C-CEEEEEECCCCeEEEEeCCCCc
Confidence 1111111 11 1244566665 4 6666555567789999988775
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.15 E-value=0.3 Score=30.30 Aligned_cols=84 Identities=8% Similarity=-0.003 Sum_probs=53.0
Q ss_pred CceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC
Q psy14817 38 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 38 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
...+.+..+.. ......++|++++.++++-..++.|..++..... . ... .....+..+++.++ ++
T Consensus 20 ~~~~~~~~~p~--~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~----------~-~~~-~~~~~p~gia~~~d-G~ 84 (306)
T 2p4o_A 20 APAKIITSFPV--NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ----------Q-IHA-TVEGKVSGLAFTSN-GD 84 (306)
T ss_dssp CCEEEEEEECT--TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE----------E-EEE-ECSSEEEEEEECTT-SC
T ss_pred CCceEeEeCCC--CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce----------E-EEE-eCCCCceeEEEcCC-Cc
Confidence 44566666654 2567899999998877776678889888875321 1 111 12246788999988 77
Q ss_pred EEEEEeCC-C-cEEEEEcCCC
Q psy14817 118 MLASCSDD-G-DVKLWQIKLE 136 (138)
Q Consensus 118 ~l~~~~~d-~-~v~~wd~~~~ 136 (138)
++++.... + .|..+|..++
T Consensus 85 l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTS
T ss_pred EEEEeccCCcceEEEEcCCCC
Confidence 65554332 2 3555665554
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.02 E-value=0.34 Score=30.21 Aligned_cols=114 Identities=12% Similarity=0.032 Sum_probs=61.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---------C-------CCccCeEEEEEec-CC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---------G-------HHGRTIYDISWCH-LT 63 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~v~~v~~~~-~~ 63 (138)
+.++|+++.++..++.|..|+..... ........ + .....+.++++.+ ++
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSG-------------FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTC-------------EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCc-------------eEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 35678877888888999999853211 11111000 0 0113578899997 55
Q ss_pred CeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEcc-CCCCEEEEEeC-----------------
Q psy14817 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNP-VVPGMLASCSD----------------- 124 (138)
Q Consensus 64 ~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~----------------- 124 (138)
.++++ ...+.+..++...+. ......... ........+++.+ + +.+.++-..
T Consensus 93 ~l~v~-d~~~~i~~~d~~~g~-------~~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 93 QLYIV-DCYYHLSVVGSEGGH-------ATQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEEEE-ETTTEEEEECTTCEE-------CEEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred cEEEE-ECCCCEEEEeCCCCE-------EEEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCC
Confidence 54444 334447777755321 000111111 1123567889988 7 776665432
Q ss_pred CCcEEEEEcCCC
Q psy14817 125 DGDVKLWQIKLE 136 (138)
Q Consensus 125 d~~v~~wd~~~~ 136 (138)
++.|..+|..++
T Consensus 164 ~g~v~~~d~~~~ 175 (322)
T 2fp8_A 164 TGRLIKYDPSTK 175 (322)
T ss_dssp CEEEEEEETTTT
T ss_pred CceEEEEeCCCC
Confidence 356777776543
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.99 E-value=0.36 Score=30.27 Aligned_cols=74 Identities=11% Similarity=-0.087 Sum_probs=44.6
Q ss_pred cCeEEEEEecCCCe-EEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 52 RTIYDISWCHLTDL-IATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~~-~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.....++++|.+.. +++-... +.|...++.... ........-...+.+++.++.+.++.+-...+.|.
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 189 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEE
Confidence 46789999986664 4443333 678777776432 11111122346788999987344444445567888
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
.+|+..
T Consensus 190 ~~d~dg 195 (316)
T 1ijq_A 190 SIDVNG 195 (316)
T ss_dssp EEETTS
T ss_pred EEecCC
Confidence 888764
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.63 E-value=0.41 Score=29.31 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=64.8
Q ss_pred ccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.|++. ++++...++.|...|.. . +.+..+........-.|++.+++.++++.-.++.+.++++
T Consensus 35 ~~~~~~L~aV~d~~~~I~~ld~~--g--------------~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 35 SAQSNTLFSTINKPAAIVEMTTN--G--------------DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ETTTTEEEEEEETTEEEEEEETT--C--------------CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEeCC--C--------------CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45554 55556677777777753 1 2233332212357788999888876666556678888888
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
................. ........-.++|.|. ++.|.++.......+|.++
T Consensus 99 ~~~~~i~~~~~~~~~~~-~~~~N~g~EGLA~d~~-~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQ-ESPTNCGFEGLAYSRQ-DHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CTTCCEEEEEEEECCCS-SCCCSSCCEEEEEETT-TTEEEEEEESSSEEEEEEE
T ss_pred CCCCeeeeeeeeccccc-cccccCCcceEEEeCC-CCEEEEEECcCCceEEEEc
Confidence 75441000001100000 1123456789999998 7666666655455555543
No 271
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.30 E-value=0.57 Score=29.53 Aligned_cols=75 Identities=4% Similarity=-0.224 Sum_probs=45.1
Q ss_pred ccCeEEEEEecCCCeEEEee--CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......+++.|.+..++-+. ..+.|...++.... ........-...+.++++++++.++.+-...+.|
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----------RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS----------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC----------eEEEEECCCCCccEEEEeccCCEEEEEECCCCEE
Confidence 45678999998766444333 35678877776432 1111112234568899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 191 ~~~d~dG 197 (318)
T 3sov_A 191 HKSNLDG 197 (318)
T ss_dssp EEEETTS
T ss_pred EEEcCCC
Confidence 8888754
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.19 E-value=0.7 Score=30.12 Aligned_cols=74 Identities=15% Similarity=-0.015 Sum_probs=44.5
Q ss_pred ccCeEEEEEecCCCe-EEEeeC-CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCc
Q psy14817 51 GRTIYDISWCHLTDL-IATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~-~~s~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~ 127 (138)
......|+++|.+.. +.+-.. .+.|...++.... ........-...+.|++.++ ...| .+-.....
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~----------~~~~~~~~l~~P~glavd~~-~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLL-SGRLYWVDSKLHS 269 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS----------CEEEECSSCSCEEEEEEETT-TTEEEEEETTTTE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc----------cEEEEECCCCceEEEEEEeC-CCEEEEEECCCCE
Confidence 345789999986664 444322 3678888776543 11121222356788999987 4444 44445667
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|..+|+..
T Consensus 270 I~~~d~dG 277 (400)
T 3p5b_L 270 ISSIDVNG 277 (400)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 88887754
No 273
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.95 E-value=0.31 Score=29.41 Aligned_cols=68 Identities=9% Similarity=-0.051 Sum_probs=39.2
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
..++.|.++|.+.++ .||.|.-++....... . ..-. -..+-...-..+..+.+.|+ +.+.+.. |+.+.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~-~-Wl~~-a~~vg~~gw~~~~~lff~p~-G~Lyav~--dg~ly 157 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD-N-WIAR-ATEVGSGGWSGFKFLFFHPN-GYLYAVH--GQQFY 157 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-C-HHHH-SEEEECSSGGGEEEEEECTT-SCEEEEE--TTEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC-c-eecc-ccEeccCCCCceEEEEECCC-ceEEEEe--CCcEE
Confidence 578899999998777 5688877665432200 0 0000 00001112246788999998 7777666 77653
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.77 E-value=0.68 Score=32.19 Aligned_cols=88 Identities=5% Similarity=-0.029 Sum_probs=50.0
Q ss_pred CCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCC-----------cEEEEeccCCCCCCceeeeeeeeeeeccccc
Q psy14817 37 DSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDD-----------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 104 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~-----------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (138)
...|..+..+.. .-.+.++.+ ++.+++.|+.+. .+.+||+.... +.........+..
T Consensus 175 ~~~W~~~~~~P~----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-------w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 175 LGRWGPTIDLPI----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-------VSDRTVTVTKHDM 243 (656)
T ss_dssp SCEEEEEEECSS----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-------BCCCEEEECSCCC
T ss_pred CCeeeeeccCCC----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-------EEeCcccCCCCCC
Confidence 345665554433 112556666 777777766432 47788887654 0001111112223
Q ss_pred ceeEEEEccCCCCEEEEEeC-CCcEEEEEcCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSD-DGDVKLWQIKLE 136 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~ 136 (138)
....+++.++ +.+++.|+. +..+.+||..+.
T Consensus 244 ~~~~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 244 FCPGISMDGN-GQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp SSCEEEECTT-SCEEEECSSSTTCEEEEEGGGT
T ss_pred ccccccCCCC-CCEEEeCCCCCCceEEecCcCC
Confidence 3345666777 888888884 567999998654
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.47 E-value=0.96 Score=29.29 Aligned_cols=73 Identities=10% Similarity=0.019 Sum_probs=41.5
Q ss_pred CeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEEE
Q psy14817 53 TIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVKL 130 (138)
Q Consensus 53 ~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~~ 130 (138)
....+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|..+.++.+-... +.|..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~----------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS----------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc----------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 456788887655 55555556778888776432 1111222334567888888723344443334 56776
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
.++..
T Consensus 230 ~~~dG 234 (386)
T 3v65_B 230 SSMDG 234 (386)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 66553
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.43 E-value=1.5 Score=31.51 Aligned_cols=75 Identities=12% Similarity=-0.053 Sum_probs=43.7
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......|+++|... ++++-... +.|...++.... ...+....-...+.|++.+..+.++++-.....|
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~----------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----------eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 34578999999765 44443233 678888776543 2222222334677888887623344443445667
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 583 ~~~d~dG 589 (791)
T 3m0c_C 583 SSIDVNG 589 (791)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 7777654
No 277
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.41 E-value=1.7 Score=31.95 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=27.6
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.++...++..++++-+.|+++|+|++..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 56777778888899999999999999998765
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.14 E-value=1.2 Score=29.44 Aligned_cols=76 Identities=8% Similarity=0.053 Sum_probs=39.5
Q ss_pred ccCeEEEEEecCCCeEEEeeCC---Cc-EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGD---DA-IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d---~~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
......+++++++.++++-... .. +...+..... ... ... ..-.....+++.|..+.++++-..++
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~---~~~------~~~-~~~~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF---TER------LSL-CNARGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT---CCE------EEE-EECSSBCCCEECTTTCCEEECBTTCS
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe---ecc------ccc-cccCCCCEEEEeCCCCeEEEEECCCC
Confidence 4568899999999955554321 12 3333322111 000 000 12234566777774256555555666
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
.|..+|..++
T Consensus 251 ~V~~~d~~~g 260 (433)
T 4hw6_A 251 MISSYDPATG 260 (433)
T ss_dssp EEEEECTTTC
T ss_pred EEEEEECCCC
Confidence 7777776543
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.92 E-value=1.1 Score=28.53 Aligned_cols=74 Identities=9% Similarity=0.020 Sum_probs=44.3
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~ 129 (138)
.....+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|..+.++.+-... +.|.
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~----------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc----------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 3456788887655 55555566789988887543 1111222334568889988634444444444 6677
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
..++..
T Consensus 186 r~~~dG 191 (349)
T 3v64_C 186 ASSMDG 191 (349)
T ss_dssp EEETTS
T ss_pred EEeCCC
Confidence 777654
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.32 E-value=1.2 Score=30.67 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=18.8
Q ss_pred CCCeEEEeeCCCcEEEEeccCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+..++.++.|+.|+.+|...++
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCC
Confidence 45666678899999999998876
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.10 E-value=2.2 Score=29.93 Aligned_cols=73 Identities=11% Similarity=0.161 Sum_probs=43.4
Q ss_pred EEEEecCCCeEEEeeCCC-------------------cEEEEeccCCCCCCceeeeeeeeeeecccc-------cceeEE
Q psy14817 56 DISWCHLTDLIATACGDD-------------------AIRIFKENPEAGDSDMVSFDLVHTEHRAHN-------QDVNCV 109 (138)
Q Consensus 56 ~v~~~~~~~~~~s~~~d~-------------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~ 109 (138)
.+.+.+....++.+..++ .|.-+|...++ ..+.... ..|. .+....
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~-----~~W~~~~---~~~~~wd~~~~~~~~~~ 305 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK-----LAWHYQV---TPGDSWDFTATQQITLA 305 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-----EEEEEES---STTCCSCCCCCSCEEEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc-----eeeEeec---CCCccccccCCCCcEEE
Confidence 467788777777776655 37777877665 1121111 0111 222222
Q ss_pred EEccCCCC---EEEEEeCCCcEEEEEcCCCC
Q psy14817 110 AWNPVVPG---MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 110 ~~~~~~~~---~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+..+ +. .++.++.+|.+.++|..+++
T Consensus 306 d~~~~-G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 306 ELNID-GKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp EEEET-TEEEEEEEECCTTSEEEEEETTTCC
T ss_pred EeccC-CcEEEEEEEECCCCEEEEEECCCCC
Confidence 22234 43 68889999999999998876
No 282
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.97 E-value=1.6 Score=28.14 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=56.7
Q ss_pred CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---C------------CcEEEE
Q psy14817 14 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---D------------DAIRIF 78 (138)
Q Consensus 14 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---d------------~~i~i~ 78 (138)
+.+|.+|++... ......+..+.+......+.+.+.++|.++++... | ..-.+|
T Consensus 138 ~s~ielf~~d~~-----------~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 138 SSTVEVFKFQEE-----------EKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp CCEEEEEEEETT-----------TTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred CCeEEEEEEECC-----------CCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 456666665432 12234455665533457899999999987776531 1 122333
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
.+..++ ..... ..-...+.++|+|+ ++.+. +-+..+.|..|++.
T Consensus 207 r~d~~~----------~~~~~-~~l~~pNGia~spD-g~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 207 YYSPND----------VRVVA-EGFDFANGINISPD-GKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EECTTC----------CEEEE-EEESSEEEEEECTT-SSEEEEEEGGGTEEEEEEEC
T ss_pred EEECCe----------EEEee-cCCcccCcceECCC-CCEEEEEeCCCCeEEEEEEC
Confidence 333222 11111 22346789999999 76554 44567889999875
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=90.59 E-value=2.9 Score=28.42 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=42.8
Q ss_pred CeEEEEE-------ecCCCeEEEeeCCC-------cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCE
Q psy14817 53 TIYDISW-------CHLTDLIATACGDD-------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118 (138)
Q Consensus 53 ~v~~v~~-------~~~~~~~~s~~~d~-------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 118 (138)
....++| ++++..++.+...+ .+.+.+................. .-.....++.+|+.+.+
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-----~~~~p~giavdp~~g~L 261 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-----AYKQCNGATIHPINGEL 261 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-----EESCCCCEEECTTTCCE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-----cCCCceEEEEcCCCCeE
Confidence 5789999 99998555544432 25555533211000000000111 11244678889963666
Q ss_pred EEEEeCCCcEEEEEcC
Q psy14817 119 LASCSDDGDVKLWQIK 134 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~ 134 (138)
+++-..++.|..+|+.
T Consensus 262 Yvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEETTTTEEEEECHH
T ss_pred EEEECCCCEEEEEecc
Confidence 6666678889999876
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.25 E-value=2.2 Score=26.67 Aligned_cols=72 Identities=10% Similarity=0.064 Sum_probs=42.2
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C-CcE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D-GDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-~~v 128 (138)
.....+++.+.+. ++++-...+.|.+.++.... ..............+++.|. +..++.+.. . +.|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~----------~~~~~~~~~~~P~~iavdp~-~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKI 145 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS----------EEEEEECTTCCEEEEEEETT-TTEEEEEECSSSCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc----------eEEEEECCCCCcceEEeCCC-CCEEEEEccCCCCeE
Confidence 3457888887555 55555567789998876432 11111122346678888886 444433333 2 567
Q ss_pred EEEEcC
Q psy14817 129 KLWQIK 134 (138)
Q Consensus 129 ~~wd~~ 134 (138)
...++.
T Consensus 146 ~~~~~d 151 (316)
T 1ijq_A 146 KKGGLN 151 (316)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 666654
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.97 E-value=1.2 Score=31.53 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=34.4
Q ss_pred eEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEEEE
Q psy14817 54 IYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVKLW 131 (138)
Q Consensus 54 v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~~w 131 (138)
...|++.+.+. ++++-...+.|.+.++.... ...+..........+++.|..+.++++-... +.|...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~----------~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC----------EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCc----------eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 44577775444 55554456778888876433 1111111223456677776523333332222 455555
Q ss_pred Ec
Q psy14817 132 QI 133 (138)
Q Consensus 132 d~ 133 (138)
++
T Consensus 525 ~~ 526 (699)
T 1n7d_A 525 GL 526 (699)
T ss_dssp CS
T ss_pred eC
Confidence 44
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.46 E-value=4.6 Score=29.15 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=43.4
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C-CcE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D-GDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-~~v 128 (138)
.....|++.+.+. ++++-...+.|.+.++.... ...+....-.....|++.|. ...|+.+.. . +.|
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~----------~~~l~~~~l~~P~gIaVDp~-~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKI 539 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS----------EEEEEECTTCCEEEEEEETT-TTEEEEEECSSSCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe----------EEEEEeCCCCCcceEEEecC-CCCEEEecCCCCCeE
Confidence 4566888888775 55555567789998887543 22222223345778888886 444444332 2 556
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 540 ~~~~~dG 546 (791)
T 3m0c_C 540 KKGGLNG 546 (791)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 6666543
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.41 E-value=3 Score=28.78 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=19.2
Q ss_pred CCCeEEEeeCCCcEEEEeccCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.+++.++.|+.++.+|.+.++
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCC
Confidence 35677778999999999999876
No 288
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.16 E-value=3.6 Score=27.46 Aligned_cols=108 Identities=7% Similarity=-0.009 Sum_probs=53.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecC---CC-eEEEeeC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHL---TD-LIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~---~~-~~~s~~~ 71 (138)
|.|+|+++++-...+.|++++..... ...+..+.. ........|+|+|+ +. ++++-+.
T Consensus 34 ~~pdG~l~V~e~~gg~I~~~~~~~g~-------------~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 34 WGPDNQIWLTERATGKILRVNPESGS-------------VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC-------------EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EcCCCcEEEEEcCCCEEEEEECCCCc-------------EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 45889888876554567777632111 122222221 02456789999995 44 4444332
Q ss_pred ------------CCcEEEEeccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeC
Q psy14817 72 ------------DDAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 72 ------------d~~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
...|.-+++..... .......+.. ...........|.|.|+ +.++++.+.
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~--~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd 163 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTD--TLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGD 163 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTT--EEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECC
T ss_pred cccCCCccccccccEEEEEEECCCCC--CcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECC
Confidence 12455555443221 1111111111 11122235788999999 877766543
No 289
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.85 E-value=2.8 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=14.7
Q ss_pred CCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 116 PGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
+.+++.|+.++ .+.+||+.+.
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEECCcCCCcccccEEEEcCCCC
Confidence 67777777653 4788887654
No 290
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.01 E-value=3.7 Score=26.21 Aligned_cols=102 Identities=10% Similarity=0.076 Sum_probs=52.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec--CCCccCeEEEEEecC---CC-eEEEeeCC--
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHL---TD-LIATACGD-- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~---~~-~~~s~~~d-- 72 (138)
|.|+|+++++- .++.|.+++ .. . ...+..+. .........|+++|+ +. ++++-...
T Consensus 38 ~~pdG~l~V~e-~~g~I~~i~--~g-~------------~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 38 FLPDGGMLIAE-RPGRIRLFR--EG-R------------LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp ECTTSCEEEEE-TTTEEEEEE--TT-E------------EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred EcCCCeEEEEe-CCCeEEEEE--CC-C------------ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 46888866654 558888887 11 1 12222221 112456789999998 44 44443322
Q ss_pred ---CcEEEEeccCCCCCCceeeeeeeee-ee--cccccceeEEEEccCCCCEEEEEe
Q psy14817 73 ---DAIRIFKENPEAGDSDMVSFDLVHT-EH--RAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 73 ---~~i~i~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
..|..++..... ......... .. .........+.|.|+ +.++++.+
T Consensus 102 ~~~~~v~r~~~~~~~----~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G 153 (352)
T 2ism_A 102 GLRNQVVRLRHLGER----GVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTG 153 (352)
T ss_dssp SSEEEEEEEEECSSC----EEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECC
T ss_pred CCccEEEEEEeCCCC----cCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEEC
Confidence 567777765321 101111111 11 111123468999998 77666643
No 291
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.65 E-value=2.8 Score=26.92 Aligned_cols=109 Identities=8% Similarity=0.017 Sum_probs=55.8
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEe---cCCCeEEEe-eCCCcEEEEecc
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC---HLTDLIATA-CGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~s~-~~d~~i~i~~~~ 81 (138)
..++.++.||.|.-.|.... +.+..+......++....-. .++..++.. ..||.|..++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG---------------~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG---------------HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT---------------EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCC---------------cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC
Confidence 46778899999999996433 33444433101122221100 122233333 578888888876
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEc---------cCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN---------PVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. ..+....... -...++.. .-. .. ...+++++.++.+.-.|+++++
T Consensus 76 ~G~-----~~~~~~~~~l-v~~SP~~~-~~~pvv~~~~~~~~-~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 76 QGL-----QKLPLSIRQL-VSTSPLHL-KTNIVVNDSGKIVE-DEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TEE-----EEEEEEHHHH-HTTCSEEE-ECC----------C-CEEEEECEEEEEEEEEETTTCC
T ss_pred CCc-----EEeeeccccc-eecccccc-CCCceeeccccccc-CCEEEEEecCCEEEEEECCCCc
Confidence 542 1111111100 01112221 100 02 5678889999999999988876
No 292
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.61 E-value=6.9 Score=28.91 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=27.0
Q ss_pred ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+.++...++ ..++++.+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETT-TTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCC-CcEEEEEECCCEEEEEECCCCC
Confidence 5666777777 8899999999999999998875
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.18 E-value=4.3 Score=26.02 Aligned_cols=104 Identities=8% Similarity=-0.012 Sum_probs=52.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec--CCCccCeEEEEEecC---CC-eEEEeeC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHL---TD-LIATACG--- 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~---~~-~~~s~~~--- 71 (138)
|.|+|+++++- .++.|++++.. . . +.+..+. .........|+++|+ +. ++++-..
T Consensus 36 ~~pdG~l~V~e-~~g~I~~~d~~-G-------------~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 36 PLGGGRYLVTE-RPGRLVLISPS-G-------------K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp EEETTEEEEEE-TTTEEEEECSS-C-------------E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred EcCCCeEEEEe-CCCEEEEEeCC-C-------------c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 35788866654 45888888621 0 1 2222221 112346789999997 44 4444332
Q ss_pred C----CcEEEEeccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEe
Q psy14817 72 D----DAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 72 d----~~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
+ ..|..++....... ......+.. ...........|.|.|+ +.++++.+
T Consensus 100 ~~~~~~~v~r~~~~~~~~~--~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G 153 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFK--LKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTG 153 (354)
T ss_dssp GGCEEEEEEEEEECSSSCC--EEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECC
T ss_pred CCCcceEEEEEEECCCCcC--cCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEEC
Confidence 2 45666666543101 111111111 11111223567999998 87666643
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=86.95 E-value=3.7 Score=25.14 Aligned_cols=64 Identities=8% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCCeEEEeeCC-----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----CcEEEE
Q psy14817 62 LTDLIATACGD-----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----GDVKLW 131 (138)
Q Consensus 62 ~~~~~~s~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~~w 131 (138)
++.+++.|+.+ ..+.+||+.... +....... ........+.+ + +.+++.|+.+ ..+.+|
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p-~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~y 274 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDS-------WTTVTSMT-TPRCYVGATVL--R-GRLYAIAGYDGNSLLSSIECY 274 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTE-------EEEECCCS-SCCBSCEEEEE--T-TEEEEECCBCSSSBEEEEEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCc-------EEECCCCC-CcccceeEEEE--C-CEEEEEcCcCCCcccccEEEE
Confidence 45666666553 358888887543 11111111 11111112222 4 6677777765 356778
Q ss_pred EcCCC
Q psy14817 132 QIKLE 136 (138)
Q Consensus 132 d~~~~ 136 (138)
|+.+.
T Consensus 275 d~~~~ 279 (301)
T 2vpj_A 275 DPIID 279 (301)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 87654
No 295
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.77 E-value=2.6 Score=29.35 Aligned_cols=78 Identities=10% Similarity=-0.064 Sum_probs=46.7
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|||++++.++ .+.++.++++........... .......+.... -.......+|.++|....+.-.|..|.-|+
T Consensus 330 vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~--~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 330 TSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL--ADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp ECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC--SCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred eCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc--cCcccceEeecc--CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 479999777554 588999999864211000000 000111122222 234567889999996666666899999999
Q ss_pred ccC
Q psy14817 80 ENP 82 (138)
Q Consensus 80 ~~~ 82 (138)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 985
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.11 E-value=5.2 Score=25.94 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=68.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
+++....+|.+..|++..... .....+.+.++.. ...+-.+...+....++.+-.+.-|..++.+.....
T Consensus 145 yafV~~k~G~~~q~~l~~~~~--------g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~ 214 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKN--------GYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGS 214 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTT--------SCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCS
T ss_pred EEEEECCCCeEEEEEEEeCCC--------CcccceEEEEecC--CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCC
Confidence 577777889999999854221 0123466777765 457888888988888888888865555554432211
Q ss_pred Cceeeeeeeeeeecc-cccceeEEEE--ccCCCC-EEEEEe-CCCcEEEEEcC
Q psy14817 87 SDMVSFDLVHTEHRA-HNQDVNCVAW--NPVVPG-MLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~-~l~~~~-~d~~v~~wd~~ 134 (138)
... .+.....+ -...+-.|++ .++ +. +|+.++ .+.++.+||..
T Consensus 215 ~~~----~v~~~~~g~l~aDvEGLai~~~~~-g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 215 NGT----VIDRADGRHLTRDIEGLTIYYAAD-GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CCE----EEEEBSSSSBCSCEEEEEEEECGG-GCEEEEEEEGGGTEEEEEESS
T ss_pred Cce----EEEEecCCccccCcceEEEEecCC-CCEEEEEEcCCCCEEEEEECC
Confidence 011 11111112 2236777777 444 44 555555 57799999986
No 297
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.53 E-value=0.64 Score=34.74 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=25.8
Q ss_pred ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+.++...++ ..++++.+.|+++|+|++.+++
T Consensus 239 ~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETT-TTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCC-ccEEEEEeCCCEEEEEECCCCC
Confidence 4445555666 7899999999999999998875
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=84.08 E-value=7.1 Score=25.81 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=37.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+|.++++-..++.|+.++..... ....+..... ......++++|++. ++++-...+.|+.+++..
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~------------~~~~~~~~~~--~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGT------------LTEEEVMMDT--KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCC------------EEEEEEECSC--CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCeEEEEECCCCEEEEEECCCCe------------EEEEEeccCC--CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 56666666667777777753110 0011211111 22335799999998 555555667899988763
No 299
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.84 E-value=6.5 Score=27.54 Aligned_cols=81 Identities=5% Similarity=-0.067 Sum_probs=51.6
Q ss_pred cCeEEEEEecCCCeEE-EeeCCCcEEEEeccCCCC----CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 52 RTIYDISWCHLTDLIA-TACGDDAIRIFKENPEAG----DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~-s~~~d~~i~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
...+.+..+|+|++++ ++-.+.++.++++..... ....+.- ...... .-.......+|.++ +.-..+---|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~-e~GlGPlHt~Fd~~-G~aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEP-ELGLGPLHTTFDGR-GNAYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECC-BCCSCEEEEEECSS-SEEEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeec-cCCCcccEEEECCC-CceEeeeeecc
Confidence 3556889999999655 455788999999984210 0000000 011111 23356778899998 76666667899
Q ss_pred cEEEEEcCC
Q psy14817 127 DVKLWQIKL 135 (138)
Q Consensus 127 ~v~~wd~~~ 135 (138)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999753
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.54 E-value=7.2 Score=25.42 Aligned_cols=74 Identities=9% Similarity=0.043 Sum_probs=43.9
Q ss_pred ccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-C-CCc
Q psy14817 51 GRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-D-DGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~-d~~ 127 (138)
......+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|. ...|+.+. . .+.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~----------~~~l~~~~~~~P~~iavdp~-~g~ly~td~~~~~~ 226 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAK 226 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS----------EEEEEECSSCCEEEEEEETT-TTEEEEEECSSSCC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc----------eEEEEeCCCCCcceEEEecc-cCeEEEEeCCCCCE
Confidence 34677899988554 55555566788888877543 22222223345678888886 44444333 2 356
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|...++..
T Consensus 227 I~~~~~dG 234 (400)
T 3p5b_L 227 IKKGGLNG 234 (400)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 77766653
No 301
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.12 E-value=3.6 Score=30.94 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=25.8
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.++...++..++++-+.|+++|+|++..+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 34455666777899999999999999998764
No 302
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.12 E-value=5.8 Score=24.08 Aligned_cols=74 Identities=8% Similarity=-0.094 Sum_probs=40.2
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..+..++|+|++.+.+. .++.+.-.+..... .....- ....+-..--....++-|.|+ +.+.++ .||.|.-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~--~~~W~~-s~t~IG~~Gw~~F~a~~fD~~-G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHD--NDNWMG-RAKKIGNGGWNQFQFLFFDPN-GYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCST--TCCHHH-HCEEEECSCGGGCSEEEECTT-SCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCC--cccccc-cccEecccccccceEEEECCC-CCEEEe--CCCEEEEe
Confidence 36679999998886665 66765554443221 000000 000110001112477888888 777777 56888766
Q ss_pred Ec
Q psy14817 132 QI 133 (138)
Q Consensus 132 d~ 133 (138)
+.
T Consensus 113 ~p 114 (236)
T 1tl2_A 113 SP 114 (236)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=82.85 E-value=7.4 Score=25.07 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=55.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---CCCccCeEEEEEecC----CCeEEEe--eC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHL----TDLIATA--CG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~~~----~~~~~s~--~~ 71 (138)
|.|+|+++++-...|.|++++..... ...+..+. .........|+++|+ +.++++- ..
T Consensus 39 ~~pdG~llVter~~G~I~~v~~~~g~-------------~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 39 PLPGGDLLVSSRDEATITRVDAKTGR-------------KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC-------------EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EcCCCcEEEEEecCCEEEEEECCCCc-------------EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 46889988877668888888742211 12222221 113456789999995 3343332 23
Q ss_pred CCcEEEEeccCCCCC-Cceeeeeeee-eeecccccceeEEEEccCCCCEEEEEe
Q psy14817 72 DDAIRIFKENPEAGD-SDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 72 d~~i~i~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
+..|.-|.+...... ........+. ............|.|.|+ +.++++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEEC
Confidence 445555555432100 0000011111 111112224567999998 87777654
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=82.63 E-value=7.8 Score=25.18 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=62.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|..+.+|--. ..++.|||++.. ..++.+.- ...|...+|-....+ +-. .+..|+.|++
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK---------------~klks~~~--~e~VvfWkWis~~~L-~lV-T~taVyHWs~ 133 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMK---------------SKMKAHTM--TDDVTFWKWISLNTV-ALV-TDNAVYHWSM 133 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTT---------------EEEEEEEC--SSCEEEEEECSSSEE-EEE-ESSEEEEEES
T ss_pred eCCCccEEEEec-CCeEEEechHHh---------------hhhcceec--CCccEEEEecCCCeE-EEE-cCCcEEEEcc
Confidence 467777777665 688999997544 33555543 467888888755442 222 2457999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-------CCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-------DDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~d~~v~~wd~~~ 135 (138)
.... .+.. ...+...-....|..-+.+++ .++++..+ -.|.+.+|..+.
T Consensus 134 ~~~s----~P~k-vFdR~~~L~~~QIInY~~d~~-~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 134 EGES----QPVK-MFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp STTC----CCEE-EEECCGGGTTCEEEEEEECTT-SCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred cCCC----CCce-eeecchhcccceEEEEEECCC-CCEEEEEeEeccCCccceeEEEEeecc
Confidence 7533 1111 111111112346666666777 77665443 235566665543
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=82.31 E-value=14 Score=28.04 Aligned_cols=72 Identities=14% Similarity=0.204 Sum_probs=43.6
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-----CCEEEEEeC-C
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-----PGMLASCSD-D 125 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~-d 125 (138)
..|...+.+. .+++.+. .+.+.++++..+. .. .... ..-...|.++++.|.. ..+++.|.. |
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~----L~---~~~~--~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d 581 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQE----LR---QISH--TEMEHEVACLDITPLGDSNGLSPLCAIGLWTD 581 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTE----EE---EEEE--EECSSCEEEEECCCCSSSTTCCSEEEEEETTT
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCc----ee---eecc--cCCCCceEEEEeecCCCCcccccEEEEEECCC
Confidence 3565555442 3444444 5667777776421 10 0111 1234579999987641 468899997 9
Q ss_pred CcEEEEEcCC
Q psy14817 126 GDVKLWQIKL 135 (138)
Q Consensus 126 ~~v~~wd~~~ 135 (138)
++++++++..
T Consensus 582 ~tv~I~sL~~ 591 (1158)
T 3ei3_A 582 ISARILKLPS 591 (1158)
T ss_dssp TEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 9999999865
No 306
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.21 E-value=10 Score=26.37 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=15.8
Q ss_pred EEEeeCCCcEEEEeccCCC
Q psy14817 66 IATACGDDAIRIFKENPEA 84 (138)
Q Consensus 66 ~~s~~~d~~i~i~~~~~~~ 84 (138)
++.++.|+.|.-+|...++
T Consensus 124 V~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCC
Confidence 7778888999999988776
No 307
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=81.81 E-value=12 Score=26.75 Aligned_cols=104 Identities=8% Similarity=0.018 Sum_probs=55.9
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+|+.|..|+.++-|..++...... +...... ......|.++...+++.+.+.. .+ -+..|+...
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~-------------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQV-------------ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ 480 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCE-------------EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT
T ss_pred CCCEEEEEeCcCceeEEeCCCCcE-------------EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC
Confidence 444355567767788888533211 1111000 0124578899888877755544 34 488888765
Q ss_pred CCCCCceeeeeeeeeee------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 83 EAGDSDMVSFDLVHTEH------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.. ..... .-....|.++...++ +.+.+... + -|..||..+
T Consensus 481 ~~----------~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt~-~-Gl~~~~~~~ 526 (795)
T 4a2l_A 481 RS----------FTTIEKEKDGTPVVSKQITTLFRDSH-KRLWIGGE-E-GLSVFKQEG 526 (795)
T ss_dssp TE----------EEECCBCTTCCBCCCCCEEEEEECTT-CCEEEEES-S-CEEEEEEET
T ss_pred Ce----------EEEccccccccccCCceEEEEEECCC-CCEEEEeC-C-ceEEEeCCC
Confidence 43 11111 012356788877776 66555443 4 477777654
No 308
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=81.27 E-value=19 Score=28.59 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=56.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|..+.+|--. ..++.|||+....+ ++.+.- ..+|...+|-.... -++| +..|..|+
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~k---------------lks~~~--~e~VvfWkWis~~~l~lVT---~~aVyHW~ 131 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSK---------------MKAHTM--TDDVTFWKWISLNTVALVT---DNAVYHWS 131 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhh---------------hccccc--CCCceEEEecCCCeeEEEc---CCeEEEec
Confidence 456666666554 56777777654332 333322 35677788865444 2333 45799999
Q ss_pred ccCCCCCCceeeeeeeeeeeccc----ccceeEEEEccCCCCEEEEEe-------CCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAH----NQDVNCVAWNPVVPGMLASCS-------DDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~-------~d~~v~~wd~~~ 135 (138)
+..... +...+..| ...|..-+.+++ ..+++..+ ..|.+.+|....
T Consensus 132 ~~~~s~---------P~k~fdR~~~L~~~QIinY~~d~~-~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 132 MEGESQ---------PVKMFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred cCCCCc---------cHHHHhcchhcccCeeEEeeeCCC-CCeEEEEeeccCCCcccceeeeeeccc
Confidence 975331 11111111 345656666676 66665333 346677776543
No 309
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=80.35 E-value=8 Score=23.85 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=14.4
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCC
Confidence 6677777654 45888887654
No 310
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=80.26 E-value=14 Score=26.45 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=45.4
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec----ccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR----AHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
...|.++...+++..+..|+.++-|..++...+. ...... .....|.++...++ +.+.+.. .+
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~----------~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt-~~- 471 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ----------VENFNQRNSQLVNENVYAILPDGE-GNLWLGT-LS- 471 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC----------EEEECTTTSCCSCSCEEEEEECSS-SCEEEEE-SS-
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc----------EEEeecCCCCcCCCeeEEEEECCC-CCEEEEe-cC-
Confidence 3578899888888745556666668889877654 111110 12356788877666 6655444 34
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
-|..||..++
T Consensus 472 Gl~~~~~~~~ 481 (795)
T 4a2l_A 472 ALVRFNPEQR 481 (795)
T ss_dssp CEEEEETTTT
T ss_pred ceeEEeCCCC
Confidence 4777877654
No 311
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=80.12 E-value=12 Score=25.56 Aligned_cols=77 Identities=5% Similarity=-0.105 Sum_probs=44.9
Q ss_pred eEEEEEecCCC-eEEEeeCCCcEEEEecc-------CCCCCCc--ee---eeeeeeeeecccccceeEEEEccCCCCE-E
Q psy14817 54 IYDISWCHLTD-LIATACGDDAIRIFKEN-------PEAGDSD--MV---SFDLVHTEHRAHNQDVNCVAWNPVVPGM-L 119 (138)
Q Consensus 54 v~~v~~~~~~~-~~~s~~~d~~i~i~~~~-------~~~~~~~--~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l 119 (138)
...++.+|++. ++++-..++.|..+|+. .+..... .. ...... ..........++|+|+ ++. +
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~--~~~~~~~p~~ia~~p~-G~~lY 325 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF--TIADPSWEFQIFIHPT-GKYAY 325 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE--ECSSSSCCEEEEECTT-SSEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE--ecCCCCCceEEEEcCC-CCEEE
Confidence 35778899554 66666677889999987 3331000 00 000011 1122345678999999 885 4
Q ss_pred EEEeCCCcEEEEEc
Q psy14817 120 ASCSDDGDVKLWQI 133 (138)
Q Consensus 120 ~~~~~d~~v~~wd~ 133 (138)
++-.....|+.++.
T Consensus 326 vaD~~~h~I~kid~ 339 (496)
T 3kya_A 326 FGVINNHYFMRSDY 339 (496)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEec
Confidence 45456677888654
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=79.43 E-value=14 Score=25.90 Aligned_cols=105 Identities=7% Similarity=-0.174 Sum_probs=56.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEee-CCCcEEEEeccC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENP 82 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~-~d~~i~i~~~~~ 82 (138)
++++++-...+.|.+.++..... +.+. .. .......|++.|.+. ++++-. ..+.|...++..
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~-------------~~l~--~~-~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLR-------------KVLF--WQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-------------EEEE--CS-SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CEEEEEeCCCCEEEEEECCCCCE-------------EEEE--eC-CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC
Confidence 34555555667777777543211 1111 12 234567889998765 444432 235666666654
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.. ........-...+.+++.++++.++.+-...+.|...|+..
T Consensus 160 ~~----------~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 160 SS----------RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp CS----------CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred Cc----------eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 32 11111123346788899887344444445566777777654
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=79.19 E-value=10 Score=24.26 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=15.0
Q ss_pred CccCCC-eEEEeeCCCcEEEeec
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKE 22 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~ 22 (138)
|.|+|+ ++++ ...+.|++++.
T Consensus 25 ~~pdG~~l~V~-e~~G~i~~~~~ 46 (353)
T 2g8s_A 25 FLPDNHGMLIT-LRGGELRHWQA 46 (353)
T ss_dssp ECSTTCCEEEE-ETTTEEEEEET
T ss_pred EcCCCCEEEEE-eCCceEEEEeC
Confidence 468888 6654 45788888873
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=78.59 E-value=9.1 Score=23.45 Aligned_cols=21 Identities=14% Similarity=0.166 Sum_probs=14.1
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 205 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 205 NLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CEEEEECCCCCCcccceEEEEeCCCC
Confidence 6677777654 35778887654
No 315
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=78.49 E-value=11 Score=24.27 Aligned_cols=111 Identities=9% Similarity=0.026 Sum_probs=60.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEE---ecCCCeEEEee-----
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISW---CHLTDLIATAC----- 70 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~---~~~~~~~~s~~----- 70 (138)
++.++++.-..++|..|+..... ...+ .+.. .....+..|.| .|++.++++..
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~-------------~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQS-------------HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCC-------------EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CCEEEEEeccCCEEEEEcCCCCe-------------EEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 35566666689999999963211 1112 2221 11224679999 68876666543
Q ss_pred --------CCCcEEEEecc---CCCCCCceeeeeeeeeeecc-------cccceeEEEEccCCCCEEEEEeCC-CcEEEE
Q psy14817 71 --------GDDAIRIFKEN---PEAGDSDMVSFDLVHTEHRA-------HNQDVNCVAWNPVVPGMLASCSDD-GDVKLW 131 (138)
Q Consensus 71 --------~d~~i~i~~~~---~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~d-~~v~~w 131 (138)
.+..|..+|+. .+. ........ ....+ .......++..++ ++..++++.. +.|...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~---~~~~~dL~-~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSK---PVWSVNFE-KVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARV 164 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCC---CSEEEESH-HHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEE
T ss_pred cccccccCCCCEEEEEcCCcCCCCC---EEEEecCc-cccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEE
Confidence 15678899988 443 00000000 00000 1124778888887 8877777666 555444
Q ss_pred Ec
Q psy14817 132 QI 133 (138)
Q Consensus 132 d~ 133 (138)
+.
T Consensus 165 ~p 166 (334)
T 2p9w_A 165 SA 166 (334)
T ss_dssp CT
T ss_pred eC
Confidence 43
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=77.64 E-value=14 Score=25.11 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=61.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|..+.+|--. ..++.|||+... ..++.+.- ...|...+|-....+ +-. .+..|+.|++
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K---------------~klks~~~--~e~VvfWkWis~~~l-~lV-T~taVyHWsi 132 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMK---------------SKMKAHTM--TDDVTFWKWISLNTV-ALV-TDNAVYHWSM 132 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTT---------------EEEEEEEC--SSCCCEEEEEETTEE-EEE-CSSEEEEEES
T ss_pred eCCCCcEEEEec-CCeEEEEchHHh---------------hhhcceec--CCCceEEEecCCCeE-EEE-cCCeeEEecc
Confidence 467777777665 688999997543 33555443 456778888755442 222 3457999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-------CCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-------DDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~d~~v~~wd~~~ 135 (138)
.... .+.. ...+...-....|..-+.+++ .++++..+ ..|.+.+|....
T Consensus 133 ~~~s----~P~k-vFdR~~~L~~~QIInY~~d~~-~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 133 EGES----QPVK-MFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp SSSC----CCEE-EEECCGGGTTCEEEEEEECTT-SSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred cCCC----Cchh-heecchhcccceEEEEEECCC-CCeEEEEeecccCCcccceEEEeeccc
Confidence 7533 1111 111111112346666677777 77765433 235566665543
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=77.17 E-value=10 Score=23.40 Aligned_cols=22 Identities=14% Similarity=0.167 Sum_probs=13.3
Q ss_pred CCCeEEEeeCCC-----cEEEEeccCC
Q psy14817 62 LTDLIATACGDD-----AIRIFKENPE 83 (138)
Q Consensus 62 ~~~~~~s~~~d~-----~i~i~~~~~~ 83 (138)
++.+++.|+.++ .+.+||+...
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 556666665543 4777777654
No 318
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.99 E-value=2.5 Score=30.20 Aligned_cols=30 Identities=13% Similarity=0.375 Sum_probs=23.5
Q ss_pred ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|.++.+ + ..++++.+.|.++|+|++++++
T Consensus 223 ~Is~~~~--~-~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--H-ERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--T-TTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--C-CcEEEEEEcCCeEEEEEcCCCc
Confidence 3444433 4 6799999999999999999875
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=76.64 E-value=12 Score=23.85 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=43.1
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC---CCCEEEEEeCC--
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV---VPGMLASCSDD-- 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d-- 125 (138)
-.....++|.|++.++++ ...+.|++++ . +. ........ ...........++++|+ ++.++++-..+
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~---~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-E-GR---LSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-T-TE---EEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-C-CC---ccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 345689999999986665 4568898887 2 21 11111000 11122456788999986 34554444432
Q ss_pred ---CcEEEEEcC
Q psy14817 126 ---GDVKLWQIK 134 (138)
Q Consensus 126 ---~~v~~wd~~ 134 (138)
..|..++..
T Consensus 102 ~~~~~v~r~~~~ 113 (352)
T 2ism_A 102 GLRNQVVRLRHL 113 (352)
T ss_dssp SSEEEEEEEEEC
T ss_pred CCccEEEEEEeC
Confidence 456666654
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=76.11 E-value=12 Score=23.50 Aligned_cols=79 Identities=6% Similarity=0.233 Sum_probs=41.4
Q ss_pred CCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE-EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC
Q psy14817 37 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI-FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 115 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 115 (138)
..+|+.+.. . ....+..+.+.+++.+++.+. ++.+.. .|-. +. .+... .......+..+.+.++
T Consensus 151 G~tW~~~~~--~-~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g-G~------tW~~~---~~~~~~~~~~~~~~~~- 215 (327)
T 2xbg_A 151 GKNWQALVQ--E-AIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG-QT------AWEPH---NRTTSRRLHNMGFTPD- 215 (327)
T ss_dssp TSSEEEEEC--S-CCCCEEEEEECTTSCEEEEET-TSSEEEEECTT-CS------SCEEE---ECCSSSCEEEEEECTT-
T ss_pred CCCCEEeec--C-CCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC-CC------ceeEC---CCCCCCccceeEECCC-
Confidence 455665543 2 345788999999887776654 444443 2211 11 00001 1123456677777776
Q ss_pred CCEEEEEeCCCcEEEE
Q psy14817 116 PGMLASCSDDGDVKLW 131 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~w 131 (138)
+.++ .++.+|.+.+.
T Consensus 216 g~~~-~~~~~G~~~~s 230 (327)
T 2xbg_A 216 GRLW-MIVNGGKIAFS 230 (327)
T ss_dssp SCEE-EEETTTEEEEE
T ss_pred CCEE-EEeCCceEEEe
Confidence 5544 34445655554
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=75.64 E-value=11 Score=23.05 Aligned_cols=44 Identities=5% Similarity=0.070 Sum_probs=22.2
Q ss_pred CCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC------CcEEEEeccCC
Q psy14817 37 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD------DAIRIFKENPE 83 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d------~~i~i~~~~~~ 83 (138)
...|..+..+.. .......+.+ ++.+++.|+.+ ..+.+||+...
T Consensus 79 ~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 79 KDSWYSKLGPPT-PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEEECCSS-CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCeEEECCCCCc-cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 345555554433 2222222222 55666666654 34778887654
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=75.63 E-value=12 Score=23.13 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=13.8
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 263 ~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 263 GRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CEEEEEcCcCCCcccceEEEEcCCCC
Confidence 6677777643 34677887654
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=75.57 E-value=14 Score=23.93 Aligned_cols=63 Identities=8% Similarity=0.161 Sum_probs=36.8
Q ss_pred cCeEEEEEecCCCeEE-EeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEe
Q psy14817 52 RTIYDISWCHLTDLIA-TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCS 123 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~-s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~ 123 (138)
...+.++|+|+++.+. +-+..+.|..|++.... ...... .. ......-.+++.+ + +++.+++.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g---~l~~~~----~~-~~~g~PDGi~vD~e~-G~lwva~~ 285 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANW---TLTPLR----VL-SFDTLVDNISVDPVT-GDLWVGCH 285 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS---CEEEEE----EE-ECSSEEEEEEECTTT-CCEEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCC---cEecCE----EE-eCCCCCceEEEeCCC-CcEEEEec
Confidence 3568999999998554 44456789999987422 111110 11 1124456667766 4 66666554
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=75.48 E-value=11 Score=22.96 Aligned_cols=21 Identities=14% Similarity=0.245 Sum_probs=14.3
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 207 ~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 207 DHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEEeCCCCCcccceEEEEeCCCC
Confidence 6677777654 45788887654
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=73.68 E-value=15 Score=23.47 Aligned_cols=66 Identities=9% Similarity=0.041 Sum_probs=36.3
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC---CCCEEEEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV---VPGMLASC 122 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~ 122 (138)
.....|+|.|++. ++++ ...+.|++++..... ...... ..............++++|+ ++.+.++-
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~---~~~~~~-~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGL---SAPLSG-VPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEE---CCCCBS-CCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCce---eeEecC-CcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 3568999999998 5554 467889888743211 000000 00011122345688999984 25555543
No 326
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=72.61 E-value=22 Score=24.95 Aligned_cols=73 Identities=11% Similarity=0.030 Sum_probs=41.7
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC--CCcE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD--DGDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~v 128 (138)
.....+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|. ...|+.+.. .+.|
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~----------~~~l~~~~l~~P~~iavdp~-~G~lY~tD~g~~~~I 148 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH----------RQVLVWKDLDSPRALALDPA-EGFMYWTEWGGKPKI 148 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT----------CEEEECSSCCCEEEEEEETT-TTEEEEEECSSSCEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc----------EEEEEeCCCCCcccEEEccC-CCeEEEeCCCCCCEE
Confidence 3566888887666 44555556788888887543 11111123345678888886 444444332 3455
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 149 ~r~~~dG 155 (628)
T 4a0p_A 149 DRAAMDG 155 (628)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 5555543
No 327
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.16 E-value=17 Score=22.76 Aligned_cols=79 Identities=9% Similarity=0.133 Sum_probs=40.6
Q ss_pred CceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC
Q psy14817 38 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 38 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
..|+.+.. . ....+..+.+.+++..++ ++.+|.+++.+.+.+. .+.............+..+.+.++ +.
T Consensus 194 ~tW~~~~~--~-~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~------tW~~~~~~~~~~~~~~~~v~~~~~-~~ 262 (327)
T 2xbg_A 194 TAWEPHNR--T-TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSE------NWGELLSPLRRNSVGFLDLAYRTP-NE 262 (327)
T ss_dssp SSCEEEEC--C-SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEE------EECCCBCTTSSCCSCEEEEEESSS-SC
T ss_pred CceeECCC--C-CCCccceeEECCCCCEEE-EeCCceEEEecCCCCC------eeEeccCCcccCCcceEEEEecCC-CE
Confidence 44555432 2 345788888888877554 4456777665322111 111010000012235778888876 66
Q ss_pred EEEEEeCCCcE
Q psy14817 118 MLASCSDDGDV 128 (138)
Q Consensus 118 ~l~~~~~d~~v 128 (138)
+++.+ .++.+
T Consensus 263 ~~~~g-~~g~i 272 (327)
T 2xbg_A 263 VWLAG-GAGAL 272 (327)
T ss_dssp EEEEE-STTCE
T ss_pred EEEEe-CCCeE
Confidence 55554 45655
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=69.51 E-value=20 Score=23.33 Aligned_cols=74 Identities=8% Similarity=0.027 Sum_probs=45.9
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
.+...++..++....+..-..-|.+.+||+..+. +....+-....|..-+-... ..-++.....|.|.-
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTgt----------~i~~nrIS~d~iF~ta~~~~-~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT----------CIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLS 327 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC----------EEEEEECCSSCEEEEEEEGG-GTEEEEEETTCEEEE
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccCc----------EEEEeccCCCceEEecccCC-CCcEEEEcCCCEEEE
Confidence 3455678888888888888889999999999987 32222223334443333333 444555556666655
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
-.++.
T Consensus 328 v~v~~ 332 (365)
T 2xzh_A 328 VCVEE 332 (365)
T ss_dssp EEECT
T ss_pred EEECc
Confidence 44443
No 329
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=69.03 E-value=27 Score=24.52 Aligned_cols=98 Identities=9% Similarity=-0.018 Sum_probs=54.2
Q ss_pred CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceee
Q psy14817 13 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVS 91 (138)
Q Consensus 13 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~ 91 (138)
....|+..++..... ..+..+.+ -..+..++|++.+. .+.+-..++.|..+++....
T Consensus 13 ~~~~I~~i~l~~~~~-------------~~~~~~~~--~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~------- 70 (628)
T 4a0p_A 13 RRADIRRISLETNNN-------------NVAIPLTG--VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA------- 70 (628)
T ss_dssp ETTEEEEEESSCTTC-------------EEECCCCS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-------
T ss_pred eCCcEEEEECCCCCc-------------ceEEEcCC--CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-------
Confidence 457888888753221 11112222 34678999998766 45555567888888876543
Q ss_pred eeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 92 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..............+++.+..++++.+-...+.|.+.++..
T Consensus 71 ---~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 71 ---LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp ---CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ---cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 11111112234566777655234444444556677766643
No 330
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=68.02 E-value=20 Score=22.56 Aligned_cols=73 Identities=1% Similarity=-0.235 Sum_probs=41.9
Q ss_pred cCeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 52 RTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
.....+++++++..+ ++=...+.|..+++.... ..............+++. . ..++.+-...+.|..
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~----------~~~~~~~~~~~P~glav~-~-~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN----------RQAVVKGSLPHPFALTLF-E-DILYWTDWSTHSILA 233 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----------CEEEECSCCSCEEEEEEE-T-TEEEEEETTTTEEEE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc----------eEEEecCCCCCceEEEEe-C-CEEEEEecCCCeEEE
Confidence 456899999877644 444456789999887432 111111223345566653 2 444555555667777
Q ss_pred EEcCCC
Q psy14817 131 WQIKLE 136 (138)
Q Consensus 131 wd~~~~ 136 (138)
++..++
T Consensus 234 ~~~~~G 239 (318)
T 3sov_A 234 CNKYTG 239 (318)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 776544
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.46 E-value=20 Score=22.51 Aligned_cols=22 Identities=18% Similarity=0.207 Sum_probs=13.3
Q ss_pred CCEEEEEeCCC------cEEEEEcCCCC
Q psy14817 116 PGMLASCSDDG------DVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~------~v~~wd~~~~~ 137 (138)
+.+++.|+.++ .+.++++++++
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 67777887543 35555777665
No 332
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=66.83 E-value=32 Score=24.55 Aligned_cols=72 Identities=7% Similarity=-0.014 Sum_probs=40.3
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecc-----cccceeEEEEccCCCCEEEEEeCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA-----HNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
...|.++...+++.+.+. +.. -|..++..... ....... ....|.++...++ +.+.+....+
T Consensus 449 ~~~v~~i~~d~~g~lwig-t~~-Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt~~~ 515 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIG-THA-GVFVIDLASKK----------VIHHYDTSNSQLLENFVRSIAQDSE-GRFWIGTFGG 515 (781)
T ss_dssp CCCEEEEEECTTSEEEEE-ETT-EEEEEESSSSS----------CCEEECTTTSSCSCSCEEEEEECTT-CCEEEEESSS
T ss_pred CCeEEEEEECCCCCEEEE-ECC-ceEEEeCCCCe----------EEecccCcccccccceeEEEEEcCC-CCEEEEEcCC
Confidence 457888888777764443 344 48888876543 1111101 1356788877666 6655443324
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
| |..+|.+++
T Consensus 516 G-l~~~~~~~~ 525 (781)
T 3v9f_A 516 G-VGIYTPDMQ 525 (781)
T ss_dssp C-EEEECTTCC
T ss_pred C-EEEEeCCCC
Confidence 4 666766543
No 333
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.14 E-value=12 Score=26.84 Aligned_cols=30 Identities=7% Similarity=0.023 Sum_probs=23.5
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.|.++.+ +..++++-+.|+++|+|++..+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3554443 46799999999999999999765
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=64.21 E-value=23 Score=21.88 Aligned_cols=21 Identities=5% Similarity=0.175 Sum_probs=13.6
Q ss_pred CCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 116 PGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
+.+++.|+.++ .+.+||+.+.
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CEEEEEeccCCCCccceEEEEECCCC
Confidence 66777776554 4677777654
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=64.06 E-value=36 Score=24.17 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=35.1
Q ss_pred cCCCeEEEeeCCC--cEEEEeccCCCCCCceeeeeeeeee--ecccccceeEEEEccCCCCEEEEEeC--C-----CcEE
Q psy14817 61 HLTDLIATACGDD--AIRIFKENPEAGDSDMVSFDLVHTE--HRAHNQDVNCVAWNPVVPGMLASCSD--D-----GDVK 129 (138)
Q Consensus 61 ~~~~~~~s~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~--d-----~~v~ 129 (138)
.++.+++.|+.++ .+.+||+.... +...... ..........+.+....+.+++.|+. + ..+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~-------W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEI-------FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTE-------EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCc-------eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEE
Confidence 3677777776554 58888887543 1111100 00111122224444332456667765 2 3477
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+||+.+.+
T Consensus 572 ~yd~~~~~ 579 (695)
T 2zwa_A 572 IFKYDAEN 579 (695)
T ss_dssp EEEECTTC
T ss_pred EEEccCCc
Confidence 88876653
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=62.85 E-value=34 Score=23.40 Aligned_cols=73 Identities=8% Similarity=0.026 Sum_probs=46.8
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
+...++..++....+..-..-|.+.+||+.++. .....+-....|..-+-... ..-++.....|.|.--
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt----------~i~~nrIs~~~iF~t~~~~~-~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGT----------CIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSV 327 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCC----------EEEEEECCSSCEEEEEEETT-TTEEEEEETTCEEEEE
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccce----------eeeeecccCCceEEecccCC-CCcEEEEccCceEEEE
Confidence 455678888888888888889999999999987 32222233344444444444 4455566677766555
Q ss_pred EcCC
Q psy14817 132 QIKL 135 (138)
Q Consensus 132 d~~~ 135 (138)
.++.
T Consensus 328 ~v~e 331 (494)
T 1bpo_A 328 CVEE 331 (494)
T ss_dssp EECT
T ss_pred EEcc
Confidence 4443
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=61.68 E-value=33 Score=22.93 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=38.8
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec--ccccceeEEEEccC---CCCEEEEEe
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPV---VPGMLASCS 123 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~---~~~~l~~~~ 123 (138)
-...+.|+|.|+|.++++-...+.|++++...+. ...... ...... ........|+++|+ ++.+.++-+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~---~~~~~~-~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGS---VKTVFQ-VPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC---EEEEEE-CTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc---EeEEec-CCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 3467899999999977775444568877654332 110000 000000 12456779999984 365555544
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=57.99 E-value=62 Score=24.86 Aligned_cols=74 Identities=18% Similarity=0.118 Sum_probs=43.0
Q ss_pred ccCeEEEEEecCC------CeEEEeeC-CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEE
Q psy14817 51 GRTIYDISWCHLT------DLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASC 122 (138)
Q Consensus 51 ~~~v~~v~~~~~~------~~~~s~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 122 (138)
...|.|+++.+.. .+++.|.. |++++|+++...+ ..............++.+.. ....+|..|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~---------~~~~~~L~~~~~p~si~l~~~~~~~~L~ig 623 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE---------LLHKEMLGGEIIPRSILMTTFESSHYLLCA 623 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC---------EEEEEECCSSCCEEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC---------eEEEEECCCCCCCcEEEEEEeCCCcEEEEE
Confidence 4579999987642 47888885 9999999998543 01110111112333333321 114567777
Q ss_pred eCCCcEEEEEc
Q psy14817 123 SDDGDVKLWQI 133 (138)
Q Consensus 123 ~~d~~v~~wd~ 133 (138)
-.||.+.-+.+
T Consensus 624 l~dG~l~~~~~ 634 (1158)
T 3ei3_A 624 LGDGALFYFGL 634 (1158)
T ss_dssp ETTSEEEEEEE
T ss_pred eCCCeEEEEEE
Confidence 78888765544
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=56.86 E-value=37 Score=21.92 Aligned_cols=61 Identities=10% Similarity=0.054 Sum_probs=37.9
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 114 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 114 (138)
.-.....|+|.|++.++++-...|.|++++...+. .. ..................|+++|+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~---~~-~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR---KT-ELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC---EE-EEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc---Ee-eecccCceeecCCCCceeeEeccc
Confidence 35577899999999988777558889888754332 10 000000111233457788999984
No 340
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=56.01 E-value=37 Score=21.71 Aligned_cols=76 Identities=8% Similarity=-0.047 Sum_probs=42.5
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC---CCCEEEEEeC---
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV---VPGMLASCSD--- 124 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~--- 124 (138)
-.....++|.|++.++++ ..++.|++++.. + ........ ...........|+++|+ ++.++++-..
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G----~~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS-G----KKLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS-C----EEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC-C----ceEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 456789999999986555 455888888622 1 11111100 11122356788999985 3555554432
Q ss_pred C----CcEEEEEcC
Q psy14817 125 D----GDVKLWQIK 134 (138)
Q Consensus 125 d----~~v~~wd~~ 134 (138)
+ ..|..++..
T Consensus 100 ~~~~~~~v~r~~~~ 113 (354)
T 3a9g_A 100 GGHIRNRVIRGRLD 113 (354)
T ss_dssp GGCEEEEEEEEEEC
T ss_pred CCCcceEEEEEEEC
Confidence 2 445555544
No 341
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=55.83 E-value=50 Score=23.16 Aligned_cols=75 Identities=7% Similarity=-0.185 Sum_probs=40.2
Q ss_pred ccCeEEEEEecCC-CeEEEee-CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLT-DLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~-~~~~s~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
-....+|++.|.. .++.+-. ....|...++.... ...+....-...+.+++.+.++.++.+-...+.|
T Consensus 434 l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~----------~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 434 LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD----------RVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc----------cEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 3567899999874 4445432 23556666655332 1111112234667788887623333343445567
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 504 ~~~~~dG 510 (619)
T 3s94_A 504 EVMNTDG 510 (619)
T ss_dssp EEEESSS
T ss_pred EEEecCC
Confidence 7666643
No 342
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=55.77 E-value=33 Score=20.99 Aligned_cols=104 Identities=9% Similarity=0.093 Sum_probs=49.3
Q ss_pred CeEEEeeCC--CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----CcEEEEe
Q psy14817 6 SRLATCSDD--ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFK 79 (138)
Q Consensus 6 ~~l~t~s~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----~~i~i~~ 79 (138)
.+++.|+.+ ..+.+||.. ...|..+..+.. ....-..+.+ ++.+++.|+.+ ..+.+||
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~-------------~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d 76 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPK-------------DYSWTDIRCPFE-KRRDAACVFW--DNVVYILGGSQLFPIKRMDCYN 76 (306)
T ss_dssp EEEEEECCSSTTSEEEEETT-------------TTEEEECCCCSC-CCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEE
T ss_pred eEEEEeCCCCCceEEEecCC-------------CCCEecCCCCCc-ccceeEEEEE--CCEEEEEeCCCCCCcceEEEEe
Confidence 455566543 467777753 334554443332 1222222222 45566666644 4577777
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC------CcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD------GDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~v~~wd~~~~ 136 (138)
+.... +....... ..........+ + +.+++.|+.+ ..+.+||+.+.
T Consensus 77 ~~~~~-------W~~~~~~p-~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 77 VVKDS-------WYSKLGPP-TPRDSLAACAA--E-GKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTTTE-------EEEEECCS-SCCBSCEEEEE--T-TEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCCCe-------EEECCCCC-ccccceeEEEE--C-CEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 76543 11111111 11111111222 4 6677777755 45777887654
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=55.38 E-value=34 Score=21.11 Aligned_cols=21 Identities=10% Similarity=0.003 Sum_probs=13.7
Q ss_pred CCEEEEEeCC--------------CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD--------------GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d--------------~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 254 ~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 254 GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp TEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred CEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 5677777653 35777887654
No 344
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=54.67 E-value=9.8 Score=22.19 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=22.8
Q ss_pred cceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 104 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 104 ~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.-+..+.|.......+++.+.++++.+||.+-|+
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 3445555655433456667779999999988665
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=53.13 E-value=38 Score=20.92 Aligned_cols=21 Identities=10% Similarity=0.170 Sum_probs=12.6
Q ss_pred CCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 116 PGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
+.+++.|+.++ .+.+||+.+.
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CEEEEEcCcCCCCccceEEEEECCCC
Confidence 56666666432 4567777654
No 346
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=48.65 E-value=53 Score=21.39 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=46.1
Q ss_pred cCeEEEEE--ecC-CC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 52 RTIYDISW--CHL-TD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 52 ~~v~~v~~--~~~-~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
..+..+++ ++. +. +++....++.+..|++..... ..........+ .-...+-.+...+. ...|+.+-.+.-
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~--g~~~~~lVR~f--~lgsq~EgcvvDd~-~g~Lyv~eEd~G 202 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN--GYISGKKVRAF--KMNSQTEGMAADDE-YGRLYIAEEDEA 202 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT--SCEEEEEEEEE--ECSSCEEEEEEETT-TTEEEEEETTTE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC--CcccceEEEEe--cCCCCcceEEEcCC-CCeEEEecccce
Confidence 34455666 664 44 577777889999998864220 01111112222 22346777888777 788888888866
Q ss_pred EEEEEcC
Q psy14817 128 VKLWQIK 134 (138)
Q Consensus 128 v~~wd~~ 134 (138)
|..++.+
T Consensus 203 Iw~~da~ 209 (355)
T 3amr_A 203 IWKFSAE 209 (355)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 6655543
No 347
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.65 E-value=80 Score=22.57 Aligned_cols=73 Identities=7% Similarity=-0.042 Sum_probs=42.2
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
...|.++...+++.+.+ |+.++-+..++...+. ..... ......|.++...++ +.+.+ ++. +-|
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~v~~i~~d~~-g~lwi-gt~-~Gl 471 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK----------FQIIELEKNELLDVRVFYEDKN-KKIWI-GTH-AGV 471 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE----------EEECCSTTTCCCCEEEEEECTT-SEEEE-EET-TEE
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc----------EEEeccCCCCCCeEEEEEECCC-CCEEE-EEC-Cce
Confidence 45788888877776544 5555568888765443 11111 112356777776665 55444 444 447
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
..+|..+++
T Consensus 472 ~~~~~~~~~ 480 (781)
T 3v9f_A 472 FVIDLASKK 480 (781)
T ss_dssp EEEESSSSS
T ss_pred EEEeCCCCe
Confidence 778876543
No 348
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=39.18 E-value=6.3 Score=26.37 Aligned_cols=17 Identities=29% Similarity=0.706 Sum_probs=11.5
Q ss_pred EEeCCCcEEEEEcCCCC
Q psy14817 121 SCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 121 ~~~~d~~v~~wd~~~~~ 137 (138)
.+..+|.|++||++...
T Consensus 162 ~~~~~GVVrvWDVkd~s 178 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAE 178 (577)
T ss_dssp ----CCEECSEECSCGG
T ss_pred CCCCCCeEEEEecCCHH
Confidence 66779999999998764
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=38.66 E-value=1.1e+02 Score=21.90 Aligned_cols=116 Identities=12% Similarity=0.098 Sum_probs=54.9
Q ss_pred CCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEE---ecCCCccCeEEEEEecC-CCeEEEeeC--C---
Q psy14817 4 TGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCT---LSGHHGRTIYDISWCHL-TDLIATACG--D--- 72 (138)
Q Consensus 4 ~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~v~~~~~-~~~~~s~~~--d--- 72 (138)
++..++.|+.++ .+.+||.. ...|..+.. ... ....-.++.+... +..++.|+. +
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~-------------t~~W~~~~~~g~~p~-~r~~~~a~v~~~~~~~iyv~GG~~~~~~~ 565 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVT-------------EEIFKDVTPKDEFFQ-NSLVSAGLEFDPVSKQGIILGGGFMDQTT 565 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETT-------------TTEEEECCCSSGGGG-SCCBSCEEEEETTTTEEEEECCBCTTSSC
T ss_pred CCEEEEECCCCCCCCEEEEECC-------------CCceEEccCCCCCCC-cccceeEEEEeCCCCEEEEECCcCCCCCe
Confidence 566777776654 57777753 344554443 111 1112223445554 556666654 2
Q ss_pred --CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC--------CCcEEEEEcCCC
Q psy14817 73 --DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD--------DGDVKLWQIKLE 136 (138)
Q Consensus 73 --~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--------d~~v~~wd~~~~ 136 (138)
..+.+||+....- .....+.............. .+....+ +.+++.|+. ...+.+||+.+.
T Consensus 566 ~~~~v~~yd~~~~~w-~~~~~W~~~~~~p~~~R~~~-~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 566 VSDKAIIFKYDAENA-TEPITVIKKLQHPLFQRYGS-QIKYITP-RKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp BCCEEEEEEECTTCS-SCCEEEEEEEECGGGCCBSC-EEEEEET-TEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred eeCcEEEEEccCCcc-ccceEEEEcCCCCCCCcccc-eEEEeCC-CEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 3488888876541 01111211111000111111 2222333 566677764 345888888764
No 350
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=38.43 E-value=1.1e+02 Score=22.01 Aligned_cols=64 Identities=9% Similarity=-0.037 Sum_probs=36.3
Q ss_pred eEEEeeCCCcEE-EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 65 LIATACGDDAIR-IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 65 ~~~s~~~d~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
.++.|..+|.|. +.-.............-..... .....+|..|.++++ ...|..++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v-~~~~~pI~~L~ld~~-~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTV-FREPTTISAMELSTK-QQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEEC-SSSCCCCCEEEEETT-TTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEee-cCCCceeeeEEEcCC-CCEEEEEECCEEEEE
Confidence 678889999864 4333222100000000000111 134568899999998 889988888877665
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=34.88 E-value=1e+02 Score=20.75 Aligned_cols=21 Identities=10% Similarity=-0.024 Sum_probs=15.2
Q ss_pred cceeEEEEccCCCCEEEEEeCC
Q psy14817 104 QDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 104 ~~v~~~~~~~~~~~~l~~~~~d 125 (138)
.....|.|.|+ +.++++.+..
T Consensus 139 H~g~~l~fgpD-G~LYv~~Gd~ 159 (463)
T 2wg3_C 139 HLGGQLLFGPD-GFLYIILGDG 159 (463)
T ss_dssp SCEEEEEECTT-SCEEEEECCT
T ss_pred ccCCcEeECCC-CcEEEEeCCC
Confidence 34678999999 8777666543
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.85 E-value=1.2e+02 Score=21.42 Aligned_cols=58 Identities=10% Similarity=0.061 Sum_probs=33.5
Q ss_pred eEEEEEecCCCeEEEeeCC------------CcEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEE
Q psy14817 54 IYDISWCHLTDLIATACGD------------DAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~ 120 (138)
.-.|.|++.|.+++.-..+ ..+.+.+...++ ..+++. .....++.++|+|+ ++.|+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~----------~~rf~~~P~gaE~TG~~fspD-g~tlf 546 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE----------IRRFMVGPIGCEVTGISFSPD-QKTLF 546 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC----------EEEEEECCTTCEEEEEEECTT-SSEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe----------EEEEEeCCCCccCcCeeECCC-CCEEE
Confidence 4568899999866654322 123333433333 222222 24568999999999 76665
Q ss_pred EE
Q psy14817 121 SC 122 (138)
Q Consensus 121 ~~ 122 (138)
..
T Consensus 547 vn 548 (592)
T 3zwu_A 547 VG 548 (592)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 353
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=34.26 E-value=1.1e+02 Score=20.93 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=41.1
Q ss_pred CeEEEEEecC----CC--eEEEeeCCCcEE-EEeccCCCCCCceeeeeee--eeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 53 TIYDISWCHL----TD--LIATACGDDAIR-IFKENPEAGDSDMVSFDLV--HTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 53 ~v~~v~~~~~----~~--~~~s~~~d~~i~-i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
..+.|+...- +. .++.|..+|.|. +.-..... ......... .... ....+|..|.+++. ...|..++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~--~~~~~~~~~eei~v~-~~~~pI~~m~l~~~-~~~Lyv~s 480 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKET--WHDLEEVLLEEMTVF-REPTTISAMELSTK-QQQLYIGS 480 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-------------CCEEECCS-SSCCCCCEEEEETT-TTEEEEEB
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCC--ccccceEEEEEEeec-CCCCccceEEEcCC-CCEEEEEE
Confidence 4566666543 43 678888999765 33222111 000000001 1111 23468899999998 88998988
Q ss_pred CCCcEEE
Q psy14817 124 DDGDVKL 130 (138)
Q Consensus 124 ~d~~v~~ 130 (138)
.++.++|
T Consensus 481 ~~~V~~v 487 (495)
T 1q47_A 481 TAGVAQL 487 (495)
T ss_dssp SSCEEEE
T ss_pred CCeEEEE
Confidence 8877665
No 354
>3enb_A PRE-mRNA-processing-splicing factor 8; PRP8 domain IV, beta finger, RNAse H, spliceosome, U5-220K, mutation, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: c.55.3.14 PDB: 3lru_A
Probab=31.48 E-value=39 Score=20.14 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=10.4
Q ss_pred EEEEEeCCCcEEEEEcCCCC
Q psy14817 118 MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~~~~ 137 (138)
-+.+-.-+|.|.+++.++|+
T Consensus 29 n~~tkpiNG~ifIfnP~TGq 48 (222)
T 3enb_A 29 NLTTKPINGAIFIFNPRTGQ 48 (222)
T ss_dssp CEEEEEECEEEEEECTTTCE
T ss_pred CceeecccceEEEEeCCCCc
Confidence 34444555555555555554
No 355
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=29.69 E-value=43 Score=18.75 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=13.2
Q ss_pred CeEEEeeCCCcEEEee
Q psy14817 6 SRLATCSDDATVKIWK 21 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~ 21 (138)
..|||++.||...+==
T Consensus 33 ~~LATAdkdG~PNVa~ 48 (148)
T 3in6_A 33 TTLSTVDRNYEVNIAV 48 (148)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEcCCCCCccEEE
Confidence 4799999999988754
No 356
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=28.62 E-value=2.4e+02 Score=23.02 Aligned_cols=32 Identities=6% Similarity=0.028 Sum_probs=25.1
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
...++..++....+...+.-|.+.++|+.++.
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccch
Confidence 34467777777777777888999999999876
No 357
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=26.48 E-value=1.2e+02 Score=18.91 Aligned_cols=24 Identities=4% Similarity=-0.043 Sum_probs=12.5
Q ss_pred EEecCCCeEEEee--CCC--cEEEEecc
Q psy14817 58 SWCHLTDLIATAC--GDD--AIRIFKEN 81 (138)
Q Consensus 58 ~~~~~~~~~~s~~--~d~--~i~i~~~~ 81 (138)
.+++++.+|+=.. .++ .|...++.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d 137 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID 137 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC
Confidence 5677777555443 333 34444444
No 358
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.30 E-value=1.7e+02 Score=20.28 Aligned_cols=73 Identities=5% Similarity=0.080 Sum_probs=42.8
Q ss_pred CeEEEEEecCCC--eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEE
Q psy14817 53 TIYDISWCHLTD--LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 53 ~v~~v~~~~~~~--~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.++.|+....+. .++.|..+|.|.=..+.... ....... ..... ....+|. .|.++++ ...|+.++.++.++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~--~~~~~~e-~~~v~-~~~~pv~~~l~~~~~-~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPP--HGGVQYE-MVSVF-KDGSPILRDMAFSIN-QLYLYVMSERQVTR 475 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETT--TEEEEEE-EEECC-TTCCCCCSCCEECTT-SSEEEEECSSEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCC--ccceeEE-EEEee-cCCCccccceEEccC-CCeEEEEeccccce
Confidence 466777665554 67888999986644443221 0101111 11111 2245775 8899998 88888888776665
Q ss_pred E
Q psy14817 130 L 130 (138)
Q Consensus 130 ~ 130 (138)
+
T Consensus 476 v 476 (539)
T 3al9_A 476 V 476 (539)
T ss_dssp E
T ss_pred e
Confidence 5
No 359
>3e9l_A PRE-mRNA-processing-splicing factor 8; nucleotidyl transfer, disease mutation, MRN splicing, nucleus, phosphoprotein, retinitis pigmentosa; 1.95A {Homo sapiens} SCOP: c.55.3.14
Probab=25.11 E-value=55 Score=19.94 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=15.2
Q ss_pred eeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 106 VNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 106 v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|..+.+++.-..-+.+-.-+|.|.+++.++|+
T Consensus 26 vYrvt~h~T~eGn~~tkpiNG~ifIfnP~TGq 57 (257)
T 3e9l_A 26 VYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQ 57 (257)
T ss_dssp SSEEEEEECSSSCEEEEEECEEEEEECTTTCE
T ss_pred EEEEEEEeccCCCceeccccceEEEEeCCCCc
Confidence 33344443323334455555556666555554
No 360
>3sbt_A PRE-mRNA-splicing factor 8; rnaseh like domain, VHS like domain, U5 snRNP assembly; 1.80A {Saccharomyces cerevisiae} SCOP: c.55.3.14 PDB: 3e66_A 3e9o_A* 3e9p_A
Probab=24.62 E-value=55 Score=20.00 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=15.8
Q ss_pred eeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 106 VNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 106 v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|..+.++..-..-+.+-.-+|.|.+++.++|+
T Consensus 25 vYrvt~hkT~eGn~~tkpiNG~ififnP~TGq 56 (260)
T 3sbt_A 25 VYRVTVHKTFEGNVATKAINGCIFTLNPKTGH 56 (260)
T ss_dssp TSEEEEEECTTSCEEEEEECEEEEEECTTTCE
T ss_pred EEEEEEEeccCCCceeccccceEEEEeCCCCc
Confidence 33344443323344555555666666666554
No 361
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=24.12 E-value=1.5e+02 Score=18.97 Aligned_cols=116 Identities=11% Similarity=0.003 Sum_probs=64.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc--
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN-- 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~-- 81 (138)
+..+++.++.+|.++--.+..-.... ........+.. ...+..+........++..+..|.+..+...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~--------r~G~~~i~lke--~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~ 177 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNR--------SGGIVAVNLRD--NDELVGAVLCSAGDDLLLVSANGQSIRFSATDE 177 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCC--------SSCEESCBCCT--TCCEEEEEEECTTCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccc--------cCceEEEEECC--CCEEEEEEEecCCCEEEEEECCCeEEEEECccc
Confidence 46788999999999988764322110 01111222332 3456556555555677777888888777665
Q ss_pred CCCCCC-ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDS-DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.-.... ...-.. ... + .....|.++...+. ...++.++..|.++.-.+
T Consensus 178 eip~~gr~a~Gv~-~i~-L-~~~d~Vv~~~~~~~-~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 178 ALRPMGRATSGVQ-GMR-F-NIDDRLLSLNVVRE-GTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp TSCCCCTTSBCEE-SSC-C-CTTCCEEEEEECCT-TCEEEEEETTSEEEEEEG
T ss_pred ccCcCCcCCCCee-eec-C-CCCCEEEEEEEECC-CCEEEEEeCCCcEEEEEH
Confidence 221100 000000 111 1 23445666655554 668888888888877654
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.49 E-value=2.1e+02 Score=20.31 Aligned_cols=60 Identities=8% Similarity=0.056 Sum_probs=34.1
Q ss_pred cCeEEEEEecCCCeEEEeeC------------CCcEEEEeccCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCE
Q psy14817 52 RTIYDISWCHLTDLIATACG------------DDAIRIFKENPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGM 118 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 118 (138)
.....|.|.++|.+.++... ...+..++...++ +..+... ....++.++|+|+ +..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe----------l~~fl~~P~~aEpnGiafSPD-~kt 544 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE----------IRRFMVGPIGCEVTGISFSPD-QKT 544 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC----------EEEEEECCTTCEEEEEEECTT-SSE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe----------EEEEEeCCCCccccCCEECCC-CCE
Confidence 34667899999886663211 1134444443333 2222222 2357899999999 666
Q ss_pred EEEE
Q psy14817 119 LASC 122 (138)
Q Consensus 119 l~~~ 122 (138)
|+..
T Consensus 545 LfV~ 548 (592)
T 4a9v_A 545 LFVG 548 (592)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 363
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=20.78 E-value=91 Score=17.33 Aligned_cols=17 Identities=12% Similarity=0.366 Sum_probs=14.8
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy14817 119 LASCSDDGDVKLWQIKL 135 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~~ 135 (138)
|++++.+|.|.+-|+|.
T Consensus 119 ivTaGG~g~VaF~D~R~ 135 (142)
T 2hrv_A 119 IVTAGGDNHVAFIDLRH 135 (142)
T ss_dssp EEEEECSSEEEEEEGGG
T ss_pred EEecCCCCEEEEEEchh
Confidence 56999999999999885
Done!