RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14817
(138 letters)
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 52.5 bits (124), Expect = 2e-09
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 19/136 (13%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G + + S D +VK+W N + TP++ + H + ++
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI----GHKDFVLSVATTQND 320
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-----GM 118
+ I + D + + D S + + + H V VA +
Sbjct: 321 EYILSGSKDRGVLFW---------DKKSGNPLLM-LQGHRNSVISVAVANGSSLGPEYNV 370
Query: 119 LASCSDDGDVKLWQIK 134
A+ S D ++W+ K
Sbjct: 371 FATGSGDCKARIWKYK 386
Score = 33.6 bits (75), Expect = 0.005
Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 20/82 (24%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-----TIYDI 57
Q + + S D V W + + L GH
Sbjct: 318 QNDEYILSGSKDRGVLFW---------------DKKSGNPLLMLQGHRNSVISVAVANGS 362
Query: 58 SWCHLTDLIATACGDDAIRIFK 79
S ++ AT GD RI+K
Sbjct: 363 SLGPEYNVFATGSGDCKARIWK 384
Score = 32.1 bits (71), Expect = 0.016
Identities = 17/99 (17%), Positives = 26/99 (26%), Gaps = 4/99 (4%)
Query: 36 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 95
D IA D A+R++ + D
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE---TGFLVERLDSE 246
Query: 96 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
+ H V V + + S S D VKLW ++
Sbjct: 247 NESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQ 284
Score = 25.5 bits (54), Expect = 2.6
Identities = 5/33 (15%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 102 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
H V CV ++ G + + +++++
Sbjct: 61 HTSVVCCVKFSN--DGEYLATGCNKTTQVYRVS 91
Score = 24.0 bits (50), Expect = 8.8
Identities = 7/72 (9%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Query: 50 HGRTIYDISWCHLTDLIATACGDDAIRIFK--------ENPEAGDSDMVSFDLVHTEHRA 101
H + + + + + +AT C + ++++ + ++ +L + +
Sbjct: 61 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 102 HNQDVNCVAWNP 113
+ + V ++P
Sbjct: 120 SDLYIRSVCFSP 131
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 50.9 bits (120), Expect = 5e-09
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 27/132 (20%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
+ G L + S D T+K+W + S C+ TL GH + + +
Sbjct: 213 SGKPGPFLLSGSRDKTIKMW---------------DVSTGMCLMTLVGHDN-WVRGVLFH 256
Query: 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120
I + D +R++ D + + T AH V + ++ P +
Sbjct: 257 SGGKFILSCADDKTLRVW---------DYKNKRCMKT-LNAHEHFVTSLDFHKTAP-YVV 305
Query: 121 SCSDDGDVKLWQ 132
+ S D VK+W+
Sbjct: 306 TGSVDQTVKVWE 317
Score = 37.0 bits (84), Expect = 3e-04
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND----SVWKCVCTLSGHHGRTIYDIS 58
Q G+ +A+CS+D TV++W A + + S S
Sbjct: 153 QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKK 212
Query: 59 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118
+ + D I+++ D+ + + T H+ V V ++
Sbjct: 213 SGKPGPFLLSGSRDKTIKMW---------DVSTGMCLMT-LVGHDNWVRGVLFHSGGK-F 261
Query: 119 LASCSDDGDVKLWQIK 134
+ SC+DD +++W K
Sbjct: 262 ILSCADDKTLRVWDYK 277
Score = 33.6 bits (75), Expect = 0.005
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
H V V ++PV ++ S S+D +K+W +
Sbjct: 14 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYE 47
Score = 29.7 bits (65), Expect = 0.092
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 45 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 104
LSGH + + + + ++ +A D I+++ D + D T + H
Sbjct: 12 ALSGHRS-PVTRVIFHPVFSVMVSASEDATIKVW---------DYETGDFERT-LKGHTD 60
Query: 105 DVNCVAWNP 113
V ++++
Sbjct: 61 SVQDISFDH 69
Score = 28.9 bits (63), Expect = 0.18
Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 19/148 (12%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
S + + S+DAT+K+W +Y+ G+ DSV SG + L
Sbjct: 28 VFSVMVSASEDATIKVW-DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 86
Query: 64 DLIATACGDDAIRIFKENPEAGDS-----------------DMVSFDLVHTEHRAHNQDV 106
D C V H + V
Sbjct: 87 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 146
Query: 107 NCVAWNPVVPGMLASCSDDGDVKLWQIK 134
V N ++ASCS+D V++W +
Sbjct: 147 RMVRPNQ-DGTLIASCSNDQTVRVWVVA 173
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 49.3 bits (116), Expect = 2e-08
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 25/128 (19%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G+ AT SDDAT +++ + + + I +S+
Sbjct: 237 NGNAFATGSDDATCRLFDLRAD--------------QELMTYSHDNIICGITSVSFSKSG 282
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
L+ D ++ D + D H+ V+C+ +A+ S
Sbjct: 283 RLLLAGYDDFNCNVW---------DALKADRAGV-LAGHDNRVSCLGVTDD-GMAVATGS 331
Query: 124 DDGDVKLW 131
D +K+W
Sbjct: 332 WDSFLKIW 339
Score = 40.9 bits (94), Expect = 2e-05
Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 25/134 (18%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
+ + + DA+ K+W + C T +GH I I +
Sbjct: 192 LAPDTRLFVSGACDASAKLW---------------DVREGMCRQTFTGHES-DINAICFF 235
Query: 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120
+ AT D R+F +L+ H + V+++ +L
Sbjct: 236 PNGNAFATGSDDATCRLFD--------LRADQELMTYSHDNIICGITSVSFSKSGR-LLL 286
Query: 121 SCSDDGDVKLWQIK 134
+ DD + +W
Sbjct: 287 AGYDDFNCNVWDAL 300
Score = 37.8 bits (86), Expect = 2e-04
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 16/76 (21%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
++G L DD +W K L+GH R + +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALK---------------ADRAGVLAGHDNR-VSCLGVTDD 323
Query: 63 TDLIATACGDDAIRIF 78
+AT D ++I+
Sbjct: 324 GMAVATGSWDSFLKIW 339
Score = 28.5 bits (62), Expect = 0.22
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
R H + + W +L S S DG + +W
Sbjct: 52 RGHLAKIYAMHWGTDSR-LLVSASQDGKLIIWDS 84
Score = 25.9 bits (55), Expect = 1.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78
+ TL GH + IY + W + L+ +A D + I+
Sbjct: 45 MRTRRTLRGHLAK-IYAMHWGTDSRLLVSASQDGKLIIW 82
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 46.8 bits (109), Expect = 1e-07
Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 9/135 (6%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
S +CS D +K+W P + S V HH + I
Sbjct: 23 CNSFTVSCSGDGYLKVWD----NKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 78
Query: 64 D-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPGM 118
L+AT + ++ E ++ L + + W ++
Sbjct: 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 138
Query: 119 LASCSDDGDVKLWQI 133
L + G +W+
Sbjct: 139 LVATDVKGTTYIWKF 153
Score = 40.2 bits (92), Expect = 3e-05
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF--KENPEAGDSDMVSFDLVHTEH 99
H I+ +S C+ + GD ++++ K D VH
Sbjct: 6 TANAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
H + + + ++A+ S GD+ ++I
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 97
Score = 38.7 bits (88), Expect = 8e-05
Identities = 16/136 (11%), Positives = 43/136 (31%), Gaps = 11/136 (8%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+AT S + ++ + + + + L+
Sbjct: 79 LCLVATTSFSGDLLFYR-ITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 137
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHT--------EHRAHNQDVNCVAWNPVVP 116
+ I+K +P A +S+ ++ + T +Q V +
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE--R 195
Query: 117 GMLASCSDDGDVKLWQ 132
G++A+ ++G V++ +
Sbjct: 196 GLIATGFNNGTVQISE 211
Score = 34.8 bits (78), Expect = 0.002
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137
+AH+ D+ V+ SCS DG +K+W KL +
Sbjct: 11 KAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLD 45
Score = 28.7 bits (62), Expect = 0.21
Identities = 14/129 (10%), Positives = 33/129 (25%), Gaps = 5/129 (3%)
Query: 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 65
+AT ++ TV+I + + + +
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 66 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125
+ + + AH+ V +++N + S D
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQA----SLGEFAHSSWVMSLSFNDSGETL-CSAGWD 310
Query: 126 GDVKLWQIK 134
G ++ W +K
Sbjct: 311 GKLRFWDVK 319
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 43.3 bits (100), Expect = 2e-06
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 11/92 (11%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
+H + I+ +++D I + ++ I+ ++ S LVH
Sbjct: 270 ANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIY---------NLRSGKLVHANI 320
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ V + ++A+ DG L
Sbjct: 321 LKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350
Score = 31.4 bits (69), Expect = 0.030
Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 26/130 (20%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+ + T +DD ++++ + K + LSGH G ++ + + H
Sbjct: 23 DNYVITGADDKMIRVY---------------DSINKKFLLQLSGHDGG-VWALKYAHGGI 66
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
L++ + + H ++ + + S
Sbjct: 67 LVSGSTDRTVRVWD----------IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR 116
Query: 125 DGDVKLWQIK 134
D + +W++
Sbjct: 117 DNTLHVWKLP 126
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 42.1 bits (97), Expect = 6e-06
Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 22/127 (17%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+ + S D T+++W +C L G
Sbjct: 188 DRLVVSGSSDNTIRLWD------------------IECGACLRVLEGHEELVRCIRFDNK 229
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
I + D I+++ + T H+ V + ++ + S S
Sbjct: 230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT-LVEHSGRVFRLQFDE---FQIVSSSH 285
Query: 125 DGDVKLW 131
D + +W
Sbjct: 286 DDTILIW 292
Score = 29.8 bits (65), Expect = 0.095
Identities = 6/36 (16%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 99 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
++ V C+ ++ + S D +K+W
Sbjct: 11 RSETSKGVYCLQYDD---QKIVSGLRDNTIKIWDKN 43
Score = 27.5 bits (59), Expect = 0.53
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 15/58 (25%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
++ + D T+KIW + + +C L+GH G + +
Sbjct: 25 DQKIVSGLRDNTIKIW---------------DKNTLECKRILTGHTGSVLCLQYDERV 67
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 40.9 bits (94), Expect = 1e-05
Identities = 7/95 (7%), Positives = 24/95 (25%), Gaps = 12/95 (12%)
Query: 39 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 98
V K H + + + + + D+ + + +
Sbjct: 253 VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW---------RTPYGASIFQS 303
Query: 99 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
+ V + + + S D ++++
Sbjct: 304 K--ESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335
Score = 32.5 bits (72), Expect = 0.012
Identities = 7/76 (9%), Positives = 15/76 (19%), Gaps = 17/76 (22%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G + D + W + ++
Sbjct: 276 CGKWFVSTGKDNLLNAW---------------RTPYGASIFQS--KESSSVLSCDISVDD 318
Query: 64 DLIATACGDDAIRIFK 79
I T GD +++
Sbjct: 319 KYIVTGSGDKKATVYE 334
Score = 27.5 bits (59), Expect = 0.54
Identities = 6/65 (9%), Positives = 20/65 (30%), Gaps = 6/65 (9%)
Query: 49 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 108
+HG + ++ + T + T G ++++ + + + +
Sbjct: 49 NHGEVVCAVTISNPTRHVYT-GGKGCVKVWDI-----SHPGNKSPVSQLDCLNRDNYIRS 102
Query: 109 VAWNP 113
P
Sbjct: 103 CKLLP 107
Score = 25.9 bits (55), Expect = 1.8
Identities = 5/39 (12%), Positives = 10/39 (25%), Gaps = 1/39 (2%)
Query: 96 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
+ H V + + S D + W+
Sbjct: 258 KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTP 295
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 39.8 bits (91), Expect = 4e-05
Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 9/79 (11%)
Query: 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 113
I +W IA + + I+ + + VH + HN V V W P
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIY-------EKSGNKWVQVHE-LKEHNGQVTGVDWAP 61
Query: 114 VVPGMLASCSDDGDVKLWQ 132
+ +C D + +W
Sbjct: 62 -DSNRIVTCGTDRNAYVWT 79
Score = 38.3 bits (87), Expect = 1e-04
Identities = 14/114 (12%), Positives = 34/114 (29%), Gaps = 14/114 (12%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+++A C ++ V I+++ + + W V L H+G + + W ++
Sbjct: 19 RTQIAICPNNHEVHIYEK-------------SGNKWVQVHELKEHNG-QVTGVDWAPDSN 64
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118
I T D ++ +V + +
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118
Score = 30.2 bits (66), Expect = 0.064
Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 99 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
H + ++C AWN +A C ++ +V +++
Sbjct: 3 HSFLVEPISCHAWNKD-RTQIAICPNNHEVHIYEKS 37
Score = 30.2 bits (66), Expect = 0.068
Identities = 5/39 (12%), Positives = 13/39 (33%), Gaps = 3/39 (7%)
Query: 99 HRAHNQDVNCVAWNPVVPG---MLASCSDDGDVKLWQIK 134
H V+ ++ + DG + +W ++
Sbjct: 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 26.0 bits (55), Expect = 1.9
Identities = 8/57 (14%), Positives = 15/57 (26%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 61
+R+ TC D +W + + +CV + S
Sbjct: 63 SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 36.4 bits (82), Expect = 5e-04
Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 14/111 (12%)
Query: 4 TGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
T + +A A V+ D DS V +GH + + + +
Sbjct: 28 TTNAIAYPCGKSAFVRCLD-------------DGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 113
GD++ ++ V +E + ++ ++W+
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
Score = 33.4 bits (74), Expect = 0.005
Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 10/95 (10%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT-E 98
+ + + AT D IR++ D+ + V
Sbjct: 240 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW---------DVTTSKCVQKWT 290
Query: 99 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
V G + S S DG + +++
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 30.3 bits (66), Expect = 0.066
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 38 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 97
S+ + + +S+ T+ IA CG A ++ ++ +V F T
Sbjct: 4 SLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF----T 59
Query: 98 EHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIK 134
H + V V ++P+ L S + G V +W
Sbjct: 60 GH--GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95
Score = 26.8 bits (57), Expect = 0.89
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 17/81 (20%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISW 59
+ AT DAT+++W + + KCV + +
Sbjct: 259 SWLDSQKFATVGADATIRVW---------------DVTTSKCVQKWTLDKQQLGNQQVGV 303
Query: 60 CHLTD-LIATACGDDAIRIFK 79
+ I + D + ++
Sbjct: 304 VATGNGRIISLSLDGTLNFYE 324
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 35.7 bits (80), Expect = 8e-04
Identities = 18/94 (19%), Positives = 25/94 (26%), Gaps = 11/94 (11%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
DL+AT D I I+ + +
Sbjct: 204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY---------SVKRPMKIIKAL 254
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
AH VN + W P L S D +K W +
Sbjct: 255 NAHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
Score = 31.1 bits (68), Expect = 0.033
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
HN+ + + NP L S S DG + W
Sbjct: 10 SGHNKGITALTVNP-----LISGSYDGRIMEWSSS 39
Score = 24.9 bits (52), Expect = 4.5
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 16/75 (21%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+AT S D + I+ +P K + L+ H + ++ W
Sbjct: 227 EDLVATGSLDTNIFIYSVKRPM--------------KIIKALNAHKDG-VNNLLW-ETPS 270
Query: 65 LIATACGDDAIRIFK 79
+ ++ D I+ +
Sbjct: 271 TLVSSGADACIKRWN 285
Score = 24.1 bits (50), Expect = 7.8
Identities = 7/75 (9%), Positives = 14/75 (18%), Gaps = 5/75 (6%)
Query: 6 SRLATCSDDATVKIW-----KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
+ L + S D + W + + +
Sbjct: 22 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGS 81
Query: 61 HLTDLIATACGDDAI 75
A G A+
Sbjct: 82 QPKVASANNDGFTAV 96
>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 307
Score = 34.9 bits (80), Expect = 0.002
Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 16/136 (11%)
Query: 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLI 66
+ TC ++ P S+ K + G + +
Sbjct: 139 IKTCMAPLPCSVYLIEHPSLKYA----TTRSIAKYPVGIEVGPQPHGVLRADILDQMRRM 194
Query: 67 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA----------WNPVVP 116
D I+ F E E + + ++ N+ + A W P+ P
Sbjct: 195 LKHALD-FIQRFNEGKEFPPCAIDVYKIMEKVDYPRNESGDVAAVIHPNLQDQDWKPLHP 253
Query: 117 GMLASCSDDGDVKLWQ 132
G S DG V
Sbjct: 254 GDPVFVSLDGKVIPLG 269
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 34.8 bits (78), Expect = 0.002
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 28/130 (21%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G + + S D ++++W + C+ TL+GH T +
Sbjct: 187 GIHVVSGSLDTSIRVW---------------DVETGNCIHTLTGHQSLTS---GMELKDN 228
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
++ + D ++I+ + + N+ + V + + SD
Sbjct: 229 ILVSGNADSTVKIWD----------IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Query: 125 DGDVKLWQIK 134
DG VKLW +K
Sbjct: 279 DGTVKLWDLK 288
Score = 32.1 bits (71), Expect = 0.017
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 12/74 (16%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
K L GH I + +C + I + D+ ++++ V+ + T
Sbjct: 6 LKSPKVLKGHDDHVITCLQFCG--NRIVSGSDDNTLKVW---------SAVTGKCLRT-L 53
Query: 100 RAHNQDVNCVAWNP 113
H V
Sbjct: 54 VGHTGGVWSSQMRD 67
Score = 30.9 bits (68), Expect = 0.035
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 23/129 (17%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+ L + + D+TVKIW + +C+ TL G + +
Sbjct: 227 DNILVSGNADSTVKIW---------------DIKTGQCLQTLQGPNKHQSAVTCLQFNKN 271
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
+ T+ D ++++ + +LV E V + + + A S
Sbjct: 272 FVITSSDDGTVKLWDLK-----TGEFIRNLVTLESGGSGGVVWRIRASNTKL-VCAVGSR 325
Query: 125 DG--DVKLW 131
+G + KL
Sbjct: 326 NGTEETKLL 334
Score = 29.4 bits (64), Expect = 0.13
Identities = 20/139 (14%), Positives = 39/139 (28%), Gaps = 9/139 (6%)
Query: 5 GSRLATCSDDATVKIWKEYK-------PGNSAGI--PTPDNDSVWKCVCTLSGHHGRTIY 55
G+R+ + SDD T+K+W G++ G+ ++ + +
Sbjct: 27 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 86
Query: 56 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 115
L +T + + V V V
Sbjct: 87 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 146
Query: 116 PGMLASCSDDGDVKLWQIK 134
+ S + D VK+W +
Sbjct: 147 GRRVVSGAYDFMVKVWDPE 165
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 34.5 bits (77), Expect = 0.002
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 15/78 (19%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
G+++A+ S D T+KIW N + K T+ +
Sbjct: 246 WSPDGTKIASASADKTIKIW---------------NVATLKVEKTIPVGTRIEDQQLGII 290
Query: 61 HLTDLIATACGDDAIRIF 78
+ + + I
Sbjct: 291 WTKQALVSISANGFINFV 308
Score = 34.5 bits (77), Expect = 0.002
Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
Query: 31 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 90
V++ + H +++ ++W IA+A D I+I+ ++
Sbjct: 218 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW---------NVA 268
Query: 91 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ + T + + L S S +G +
Sbjct: 269 TLKVEKTIPVGTRIEDQQLGIIWT-KQALVSISANGFINFV 308
Score = 24.1 bits (50), Expect = 7.0
Identities = 7/95 (7%), Positives = 17/95 (17%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
++ + + D +
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
+ +AS S D +K+W +
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 268
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 34.1 bits (76), Expect = 0.003
Identities = 8/83 (9%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Query: 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 109
I DI L+ D ++ ++ D+ + ++ + + + C
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVY-------KFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 110 AWNPVVPGMLASCSDDGDVKLWQ 132
+ + + G++
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVD 85
Score = 32.1 bits (71), Expect = 0.014
Identities = 15/134 (11%), Positives = 35/134 (26%), Gaps = 13/134 (9%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
A S D V + G+ + + + I +
Sbjct: 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP-VNSIEFSPRHK 264
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
+ TA D I + ++ + + + + V +A + +L +
Sbjct: 265 FLYTAGSDGIISCW---------NLQTRKKIKNFAKFNEDSVVKIACSD---NILCLATS 312
Query: 125 DGDVKLWQIKLENL 138
D K + +
Sbjct: 313 DDTFKTNAAIDQTI 326
Score = 31.7 bits (70), Expect = 0.022
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 101 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
A ++ + P +L S DG + +++
Sbjct: 9 APKDYISDIKIIPS-KSLLLITSWDGSLTVYKF 40
Score = 29.0 bits (63), Expect = 0.18
Identities = 8/58 (13%), Positives = 17/58 (29%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 61
+ S L S D ++ ++K + + C + IY +
Sbjct: 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79
Score = 27.1 bits (58), Expect = 0.76
Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 8/134 (5%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
M SRL +++ V+ ++ + G L
Sbjct: 156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYA---CS 212
Query: 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120
+ +A DD + + ++ + VN + ++P L
Sbjct: 213 SIDGRVAVEFFDDQGDDYN----SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLY 267
Query: 121 SCSDDGDVKLWQIK 134
+ DG + W ++
Sbjct: 268 TAGSDGIISCWNLQ 281
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 32.3 bits (71), Expect = 0.013
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
H + +SW +AT D+++ ++ + + S + +
Sbjct: 213 ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW-------NMNKPSDHPIIIKG 265
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
VN V W + S D ++K W +
Sbjct: 266 AHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNV 297
Score = 29.2 bits (63), Expect = 0.14
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 102 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
HN+ + ++ + L S +G + W I
Sbjct: 11 HNKAITALSSSAD-GKTLFSADAEGHINSWDIS 42
Score = 27.6 bits (59), Expect = 0.44
Identities = 8/73 (10%), Positives = 18/73 (24%), Gaps = 10/73 (13%)
Query: 41 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 100
GH+ I +S + +A + I + D+ +
Sbjct: 3 SIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSW---------DISTGISNRVFPD 52
Query: 101 AHNQDVNCVAWNP 113
H + +
Sbjct: 53 VHATMITGIKTTS 65
Score = 27.6 bits (59), Expect = 0.47
Identities = 9/66 (13%), Positives = 14/66 (21%), Gaps = 15/66 (22%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G L + + + W + S H I I D
Sbjct: 24 GKTLFSADAEGHINSW---------------DISTGISNRVFPDVHATMITGIKTTSKGD 68
Query: 65 LIATAC 70
L +
Sbjct: 69 LFTVSW 74
Score = 24.2 bits (50), Expect = 8.3
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 14/70 (20%)
Query: 9 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 68
AT S D +V +W KP + + H ++ + W + I +
Sbjct: 240 ATGSLDNSVIVWNMNKPSD-------------HPIIIKGAHAMSSVNSVIWLN-ETTIVS 285
Query: 69 ACGDDAIRIF 78
A D I+ +
Sbjct: 286 AGQDSNIKFW 295
Score = 23.8 bits (49), Expect = 9.2
Identities = 3/16 (18%), Positives = 8/16 (50%)
Query: 5 GSRLATCSDDATVKIW 20
+ + + D+ +K W
Sbjct: 280 ETTIVSAGQDSNIKFW 295
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 29.7 bits (65), Expect = 0.11
Identities = 13/135 (9%), Positives = 27/135 (20%), Gaps = 4/135 (2%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
P + ++ G+T
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 249
Query: 61 HLTDLIA-TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 119
D +I+ D+ L+ + H CVA++ L
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT--YYCVAFDKK-GDKL 306
Query: 120 ASCSDDGDVKLWQIK 134
D+ ++
Sbjct: 307 YLGGTFNDLAVFNPD 321
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 28.7 bits (62), Expect = 0.24
Identities = 12/160 (7%), Positives = 35/160 (21%), Gaps = 27/160 (16%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGN------------------SAGIPTPDNDSVWKC 42
L S + + P + +
Sbjct: 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAG 245
Query: 43 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG--------DSDMVSFDL 94
L+ + R+ +I I + E ++ +D+
Sbjct: 246 EYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV 305
Query: 95 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
+ ++ + + + DDG + + ++
Sbjct: 306 KTRKVTEVKNNLTDLRLSAD-RKTVMVRKDDGKIYTFPLE 344
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 27.8 bits (60), Expect = 0.40
Identities = 10/128 (7%), Positives = 26/128 (20%), Gaps = 6/128 (4%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
RL + + A G
Sbjct: 206 AGRLVWPTYTGKIHQI--DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL-DR 262
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCS 123
+ D R + D + + + +++ + + P + A +
Sbjct: 263 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMGHEIDSINVSQDEKPLLYALST 320
Query: 124 DDGDVKLW 131
D + +
Sbjct: 321 GDKTLYIH 328
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 127
Score = 25.9 bits (56), Expect = 1.2
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 34 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 70
P D + LS H + + L + I+T
Sbjct: 44 PACDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNG 80
>d1jb0b_ f.29.1.1 (B:) Apoprotein a2, PsaB {Synechococcus elongatus
[TaxId: 32046]}
Length = 739
Score = 24.8 bits (54), Expect = 4.3
Identities = 7/44 (15%), Positives = 12/44 (27%)
Query: 25 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 68
PG D+ + + + G + W HL
Sbjct: 568 PGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGN 611
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 24.4 bits (51), Expect = 5.7
Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 3/101 (2%)
Query: 31 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 90
I D + + T+ G +TA R F D+
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE 268
Query: 91 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ V + + GD+ +
Sbjct: 269 KNASIKR--VPLPHSYYSVNVSTD-GSTVWLGGALGDLAAY 306
>d1v7wa2 b.30.5.3 (A:1-270) Chitobiose phosphorylase ChbP {Vibrio
proteolyticus [TaxId: 671]}
Length = 270
Score = 24.0 bits (52), Expect = 8.1
Identities = 3/21 (14%), Positives = 8/21 (38%)
Query: 118 MLASCSDDGDVKLWQIKLENL 138
D ++W + ++N
Sbjct: 120 KTLFVPKGEDAEIWDVVIKNT 140
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.447
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 578,987
Number of extensions: 25072
Number of successful extensions: 250
Number of sequences better than 10.0: 1
Number of HSP's gapped: 166
Number of HSP's successfully gapped: 106
Length of query: 138
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 62
Effective length of database: 1,364,116
Effective search space: 84575192
Effective search space used: 84575192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.2 bits)