BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1482
(627 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q64350|EI2BE_RAT Translation initiation factor eIF-2B subunit epsilon OS=Rattus
norvegicus GN=Eif2b5 PE=1 SV=2
Length = 716
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 224/684 (32%), Positives = 371/684 (54%), Gaps = 79/684 (11%)
Query: 18 LQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQI 75
LQAV+V D+F+R FFP+ +P LLPL N L++YTLE L +G++E VFC QI
Sbjct: 38 LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 97
Query: 76 RELVKRKEKSLVGTL--ITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLL 133
+E +++ + +L + +I SD S GDV+RD+D KA++R+DF+L+ GDVVSNIN+
Sbjct: 98 KEHLQKSKWCHPTSLNVVRIITSDLYRSLGDVLRDVDAKALVRSDFLLIYGDVVSNINIS 157
Query: 134 SALKSFKKINSMDSG-AVALVLYKKKGQSKSS--WKEDLIVAYECDSKKLLMHQTPQDNQ 190
AL+ + ++ +V +++K+ S + ++++++A + + ++L Q Q
Sbjct: 158 KALEEHRLRRKLEKNVSVMTMVFKESSPSHPTRCHEDNVVLAVDSTTNRILHFQKTQ-GL 216
Query: 191 KKVNIPMENILLYSKL---EICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLIN 247
+ + P+ L L EI L I ICSP V LF+DNFD+QT++ F++G+L+N
Sbjct: 217 RHFSFPLG--LFQGSLDGVEIRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVN 274
Query: 248 EEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP----------SYKYR 297
EEIL +++ V EYG V + Y D+++RWV+P P SY +
Sbjct: 275 EEILGNQIHLHVTSR-EYGARVSNLHMYSAVCADVIRRWVYPLTPEVNFTDSSTQSYTHS 333
Query: 298 RNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFD 357
R+NIY +V +G SVL++ V++G G+ +G N +++ +IG NC IG NV L+++YL+
Sbjct: 334 RHNIYRGPEVSLGHGSVLEENVLLGAGTVVGSNCSITNSVIGPNCHIGDNVVLDQAYLWQ 393
Query: 358 NVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLS-----GVKLPSAGA 412
V++ ++ S+L V E L C+L + V++G L + P A
Sbjct: 394 GVRVAAGAQIHQSLLCDRAEVKERVILKPHCVLTSQVVVGPDIILPEGSVISLHPPDAEE 453
Query: 413 DE-----VDDGNNDSDEEEVPKFKCESEQELDSD-------------------------- 441
DE DD D ++E+V K K + E+ +
Sbjct: 454 DEDDGQFSDDSGADQEKEKV-KLKGYNPAEVGPEGQGYLWKAEDVDEKEDEELRQSLWGL 512
Query: 442 --------ESDSESENDVDSVDGQ-GTPPMDDTSLFYTEVVDSLLRGYEEKLVCDNLTLE 492
E++SE D + +D + G+P +DD +F EV+ +L RG EE + CDNL LE
Sbjct: 513 MINMEEESETESERSVDPEELDSRAGSPQLDDIRVFQNEVLGTLQRGREENISCDNLVLE 572
Query: 493 INSSRYAYNVTVKEVNFYMVKAIL---VVKNKPDMDMKSFHTHMMSKINYFLPLFKNYIK 549
INS +YAYN+++KEV + +L + + +D + ++ + + P+F+NYIK
Sbjct: 573 INSLKYAYNISLKEVMQVLSHVVLEFPLQQVDGVLDPNRYCALLLPLLKAWSPVFRNYIK 632
Query: 550 NESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLEPS----SL 605
+ + L A E+F E+E+L K+L Y +IL+E+ + WF++ + + L
Sbjct: 633 RAADHLEALAAIEDFFLEHETLVPSLAKVLMAFYQLEILAEETILSWFSQRDITDKGQQL 692
Query: 606 RKS--VEPFVKWLLEADEESEEDD 627
RK+ ++ F++WL EA+EES +DD
Sbjct: 693 RKNQQLQRFIQWLREAEEESSDDD 716
>sp|P47823|EI2BE_RABIT Translation initiation factor eIF-2B subunit epsilon OS=Oryctolagus
cuniculus GN=EIF2B5 PE=1 SV=1
Length = 721
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 360/683 (52%), Gaps = 99/683 (14%)
Query: 18 LQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQI 75
LQAV+V D+FNR FFP+ +P LLPL N L++YTLE L +G++E VFC QI
Sbjct: 43 LQAVLVADSFNRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102
Query: 76 RELVKRKEKSLVGTL--ITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLL 133
+E +++ + +L + +I S+ S GDV+RD+D KA++R+DF+LV GDVVSNIN+
Sbjct: 103 KEHLQKSKWCRPTSLNVVRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVVSNINVT 162
Query: 134 SALKSFKKINSMDSG-AVALVLYKKKGQSKSS--WKEDLIVAYECDSKKLLMHQTPQDNQ 190
AL+ + ++ +V +++K+ S + +++++VA + + ++L Q Q
Sbjct: 163 RALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSATNRILHFQKTQ-GL 221
Query: 191 KKVNIPMENILLY----SKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLI 246
++ + P+ L+ + +EI L I ICSP V LF+DNFD+QT++ F++G+L+
Sbjct: 222 RRFSFPLS---LFQGSGAGVEIRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLV 278
Query: 247 NEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP----------SYKY 296
NEEIL +++ V EYG V + Y D+++RWV+P P S +
Sbjct: 279 NEEILGNQIHMHVTTR-EYGARVSNLHMYSAVCADVIRRWVYPLTPEANFTDSTAQSCTH 337
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLF 356
R+NIY +V +G S+L++ V++G G+ IG N +++ +IG C IG NV L+++YL+
Sbjct: 338 SRHNIYRGPEVSLGHGSILEENVLLGSGTVIGSNCSITNSVIGPGCCIGDNVVLDRAYLW 397
Query: 357 DNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL---SGVKLPSAGAD 413
V++ ++ S+L + V E L C+L + V++G L S + L A+
Sbjct: 398 KGVQVASGAQIHQSLLCDHAEVKEQVTLKPHCVLTSQVVVGPNITLPEGSVISLHPPDAE 457
Query: 414 EVDDGNNDSDEEEVPKFK----------------------------CESEQEL------- 438
E +D SD+ V + K E E+EL
Sbjct: 458 EDEDDGQFSDDSGVNQAKEKAKLKGYNPAEVGVAGKGYLWKAADMNTEKEEELRQSLWGL 517
Query: 439 ----------------DSDESDSESENDVDSVDGQGTPPMDDTSLFYTEVVDSLLRGYEE 482
DS+E DS + G+P +DD +F EV+ +L RG EE
Sbjct: 518 TINEEEESETESERSMDSEELDSRA----------GSPQLDDIKVFQNEVLGTLQRGKEE 567
Query: 483 KLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAIL---VVKNKPDMDMKSFHTHMMSKINY 539
+ CDNL LEINS +YAYN+++KEV + +L + + ++ + ++ +
Sbjct: 568 SISCDNLILEINSLKYAYNISLKEVMQVLSHVVLEFPLQQMDSPLEANRYCALLLPLLKA 627
Query: 540 FLPLFKNYIKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNK 599
+ P+F+NYIK + + L A EEF E+E+L K+L Y +IL+E+ + WF +
Sbjct: 628 WSPVFRNYIKRAADHLEALAAIEEFFLEHEALGTCIAKVLMGFYQLEILAEETILSWFGQ 687
Query: 600 LEPS----SLRKS--VEPFVKWL 616
+ + LRK+ ++ F++WL
Sbjct: 688 RDVTDKGRQLRKNQQLQRFIQWL 710
>sp|Q8CHW4|EI2BE_MOUSE Translation initiation factor eIF-2B subunit epsilon OS=Mus
musculus GN=Eif2b5 PE=1 SV=1
Length = 717
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 359/676 (53%), Gaps = 85/676 (12%)
Query: 18 LQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQI 75
LQAV+V D+FNR FFP+ +P LLPL N L++YTLE L +G++E VFC QI
Sbjct: 39 LQAVLVADSFNRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 98
Query: 76 RELVKRKE--KSLVGTLITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLL 133
+E +++ + ++ +I S+ S GDV+RD+D KA++R+DF+L+ GDV+SNIN+
Sbjct: 99 KEHLQKSKWCHPTSPNVVRIITSELYRSLGDVLRDVDAKALVRSDFLLIYGDVISNINIC 158
Query: 134 SALKSFKKINSMDSG-AVALVLYKKKGQSKSS--WKEDLIVAYECDSKKLLMHQTPQDNQ 190
AL+ + ++ +V +++K+ S + ++++++A + + ++L Q Q
Sbjct: 159 RALEEHRLRRKLEKNVSVMTMVFKESSPSHPTRCHEDNVVMAVDSATNRVLHFQKTQ-GL 217
Query: 191 KKVNIPMENILLYSK----LEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLI 246
++ + P+ L+ +EI L I ICSP V LF+DNFD+QT++ F++G+L+
Sbjct: 218 RRFSFPLS---LFQGSGDGVEIRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGILM 274
Query: 247 NEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP----------SYKY 296
NEE+L +++ V EYG V + Y D+++RWV+P P SY +
Sbjct: 275 NEEVLGNQIHLHVTTR-EYGARVSNLHMYSAVCADVIRRWVYPLTPEVNFTDSTTQSYTH 333
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLF 356
R+NIY +V +G SVL++ V++G G+ IG N +++ +IG NC IG NV L+++YL+
Sbjct: 334 SRHNIYRGPEVSLGHGSVLEENVLLGAGTVIGSNCSITNSVIGPNCHIGDNVVLDQAYLW 393
Query: 357 DNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLS-----GVKLPSAG 411
V++ ++ S+L V E KL C+L + V++G L + P A
Sbjct: 394 QGVRVAAGAQIHQSLLCDRAEVKERVKLKPYCVLTSQVVVGPDITLPEGSVISLHPPDAE 453
Query: 412 ADE-----VDDGNNDSDEEEV-------PKFKCESEQELDSDESDSESEND--------- 450
DE DD D ++E+V + E + L E + E++
Sbjct: 454 EDEDDGQFSDDSGADQEKEKVKLKGYNPAEVGLEGQGYLWKAEGVNSKEDEELRQSLWGL 513
Query: 451 ------------VDSVDGQ------GTPPMDDTSLFYTEVVDSLLRGYEEKLVCDNLTLE 492
SVD + G+P +DD +F EV+ +L RG EE + C+NL LE
Sbjct: 514 MIKTEEESETESEGSVDPEELDSRAGSPQLDDIRVFQNEVLGTLQRGREENISCENLVLE 573
Query: 493 INSSRYAYNVTVKEVNFYMVKAILVVKNKP------DMDMKSFHTHMMSKINYFLPLFKN 546
INS ++AYN+++KEV M LVV P +D + ++ + + P+ +N
Sbjct: 574 INSLKHAYNISLKEV---MQVLTLVVLEFPLQQVDGLLDPNRYCALLLPLLKAWSPVLRN 630
Query: 547 YIKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKL----EP 602
YIK + + L A E+F E+E+L K+L Y +IL+E+ + WF++ E
Sbjct: 631 YIKRAADHLEALAAIEDFFLEHETLVTSMAKVLMAFYQLEILAEETILSWFSQRDTTDEG 690
Query: 603 SSLRKS--VEPFVKWL 616
LRK+ ++ F++WL
Sbjct: 691 QQLRKNQQLQRFIQWL 706
>sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif225 PE=1 SV=1
Length = 678
Score = 269 bits (687), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 189/655 (28%), Positives = 332/655 (50%), Gaps = 62/655 (9%)
Query: 17 VLQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQ 74
LQA++++D++N F P+ +P CLLPL N L+EYT E L L+G++E+ VFC +H Q
Sbjct: 17 ALQAIVLSDSYNYRFRPLTLDKPRCLLPLANTPLIEYTFEFLALAGVQEVYVFCCAHAGQ 76
Query: 75 IRELVKRKEKSLVGTLITL--IVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINL 132
IRE +++ + +L + ++ IVS S GD +R+LD K +I +DFILVSGDVVSN+ L
Sbjct: 77 IREYIEKSKWNLPSSPFSVNTIVSRESLSVGDALRELDSKQLITSDFILVSGDVVSNVPL 136
Query: 133 LSALKSFKKINSMDSGAVALVLYKKKG--QSKSSWKEDLIVAYECDSKKLLMHQTPQDNQ 190
LK +K D A+ ++ ++ + E + + + + + +Q + +
Sbjct: 137 NEVLKEHRKRREDDKNAIMTMVVREASPFHRTRARTESSVFVIDKKTSQCVHYQANERGK 196
Query: 191 KKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ-TQEHFIKGVLINEE 249
V++ E + +LE+ L I ICS VP LF++NFD+Q ++ F+ GVL ++
Sbjct: 197 HYVSMDPEIFNEHEELEVRNDLIDCQIDICSNDVPALFTENFDYQDIRKDFVYGVLTSD- 255
Query: 250 ILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP-------SYKYRRNNIY 302
+L +++C V + Y V+ +Y S+D++ RWV+PFVP ++ Y+R+ IY
Sbjct: 256 LLGKKIHCHVAKE-NYAARVRSLQTYDAISKDVLSRWVYPFVPDSNLLNQTFSYQRHQIY 314
Query: 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIE 362
EDV++ ++ ++K + +IG + +G+ + +++ IIGRNCTIGSN ++ ++L+++V I
Sbjct: 315 KEEDVVLARSCIIKARTLIGAYTKVGDASVVANTIIGRNCTIGSNCSIDSAFLWEDVVIG 374
Query: 363 DNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSAGADEVDDGNNDS 422
DNC + ++L+ + +G + + +G ++ GV+IG+ T + K + ND
Sbjct: 375 DNCRIGKAILANSVKIGNNCSIEDGAIVAAGVVIGDNTIIEKNKRLTTFESHSQGTLNDP 434
Query: 423 DEEEVPKFKCESEQELDSDESDS--------ESENDV----------------------- 451
+ E E DSD+ ES N++
Sbjct: 435 SLVGIGGRGQEYHAEEDSDDEGEFMEASGLIESTNELHLSDSESSETSSSSEEDMEFIPF 494
Query: 452 ----DSVDGQGTPPMDDTSLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEV 507
DS + + D+ F E SL R +EE D LE+N+ R A N EV
Sbjct: 495 SARRDSANTINSEDFDEGD-FNKEAQQSLERAFEENHQIDIAALELNTLRMAMNANYHEV 553
Query: 508 NFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFKNYIKNESAQQDCLDAFEEFAEE 567
+V A+L D+ K +M++ + PL + Q D + +++
Sbjct: 554 RSAIVLALLRRIMHLDVSPKEALAKVMTR---WGPLLAKLTFSHEEQVDNVLTLQKYCVR 610
Query: 568 NESLSVVAGKLLHKLYDKDILSEDIVTKWF-----NKLEPSSLRKS-VEPFVKWL 616
S++ +LL Y +I E+ + +W+ ++ E ++LR + + FV WL
Sbjct: 611 -LSMTRHFLQLLGYFYQLEIAEENAIQEWYSDPRSSEGELAALRDAGGKQFVDWL 664
>sp|Q54RF3|EI2BE_DICDI Translation initiation factor eIF-2B subunit epsilon
OS=Dictyostelium discoideum GN=eif2b5 PE=3 SV=1
Length = 707
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 199/676 (29%), Positives = 334/676 (49%), Gaps = 74/676 (10%)
Query: 11 EIQKDEVLQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFC 68
+++ +++LQAV++ D+F+R F P+ +P LLPLVN LL+YTLE L SG+++I VFC
Sbjct: 18 QLKSEDILQAVVLGDSFDRKFAPITLEKPRTLLPLVNIPLLDYTLEFLAASGVQQIFVFC 77
Query: 69 TSHVNQIRELVKR-KEKSLVGTLITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVV 127
+H +QI+E ++ + L G + + C + GD +R + VI++DFIL+SGDVV
Sbjct: 78 CAHASQIKEYIQSSRWHDLPGVQVICMTGSNCRTTGDALRGVYDAQVIQSDFILISGDVV 137
Query: 128 SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKS--SWKEDLIVAYECDSKKLLMHQT 185
SN+NL AL+ K +D + ++YK+ + S ++D ++ D+ +++ +
Sbjct: 138 SNMNLQKALQIHKDRRELDKNNIMTMVYKQASSTHRTRSKQDDTVIWCNRDTMQVVCY-- 195
Query: 186 PQDNQKKVNIPMENILLYSK---LEICAHLASTGIMICSPAVPPLFSDNFDFQ-TQEHFI 241
DN ++ L+ K +++ L I ICSP V LF+DNFDF ++ FI
Sbjct: 196 --DNSPSKKKSSISVELFQKHPSIQMRYDLIDCHIDICSPEVLALFNDNFDFADIRKDFI 253
Query: 242 KGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP--------S 293
+L ++LD +L V+ EY VKD +Y S+DI+ RW P VP S
Sbjct: 254 HDIL-TSDLLDYKLSAYVLQG-EYAARVKDLRTYHSVSKDIIHRWTFPMVPDNNFMCNSS 311
Query: 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKS 353
Y R IY ++V + ++ + VIG + IG + +SH IGRNC IG NV++ S
Sbjct: 312 YSLSRQMIYKEKNVKLLGDCLISDETVIGTQTEIGAGSIVSHSTIGRNCIIGKNVKINGS 371
Query: 354 YLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIG-NKTCLSGVKLPSAGA 412
Y++D+V I+DN + S++ + + S + G ++G V IG +KT K+ A
Sbjct: 372 YIWDDVTIQDNAIIDHSIICNGSIIKSSSIIGRGSIIGFNVYIGQSKTLEPFSKITMAQY 431
Query: 413 DEVDDG-----------------------------------NNDSDEEEVPKFKCESEQE 437
+E +D N+ E VP+ +
Sbjct: 432 NEDEDDEELLEEYFKEINLNDDNNNNNNNNNENNKTNRWLMENELYNELVPRINDSIHDD 491
Query: 438 LDSDESDSESENDVDSV----DGQGTPPMDDTSLFYTEVVDSLLRGYEEKLVCDNLTLEI 493
++SDES E + + + P D+ F+ EV D++ RG EKL +N+ LEI
Sbjct: 492 IESDESGDEGDKSGGKIKNNKNNDDNPIEPDSVKFHREVGDTIRRGIIEKLPLENIQLEI 551
Query: 494 NSSRYAYNVTVKEVNFYMVKAIL-----VVKNKPDMDMKSFHTHMMSKINYFLPLFKNYI 548
N ++AY+ + ++ +L + K + +I+ F PL +
Sbjct: 552 NGLKFAYDRDGLDCLTSILPVLLESSSSSSSTTDSVTPKELQQFIAGRISAFSPLLVKF- 610
Query: 549 KNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLEPSSLR-- 606
+E + D + ++F +ENE VV +LH+LY+ D++SE+ + +W ++E
Sbjct: 611 SSEDSMVDLIFKIQDFCDENEKFKVVFQPILHQLYENDVISEEAIFEWAEEIEGDEEDDG 670
Query: 607 ---KSVEPFVKWLLEA 619
K + F+ WL A
Sbjct: 671 FYLKKCKGFIDWLKSA 686
>sp|P32501|EI2BE_YEAST Translation initiation factor eIF-2B subunit epsilon
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GCD6 PE=1 SV=1
Length = 712
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 202/708 (28%), Positives = 349/708 (49%), Gaps = 92/708 (12%)
Query: 1 MQHKKGKAKS---------EIQKDEVLQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLL 49
M KKG+ KS ++ ++ LQAV++TD++ F P+ +P CLLPL N L+
Sbjct: 1 MAGKKGQKKSGLGNHGKNSDMDVEDRLQAVVLTDSYETRFMPLTAVKPRCLLPLANVPLI 60
Query: 50 EYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGT--LITLIVSDGCYSFGDVMR 107
EYTLE L +G+ E+ + C+SH NQI + ++ + +L + IT I+S GDVMR
Sbjct: 61 EYTLEFLAKAGVHEVFLICSSHANQINDYIENSKWNLPWSPFKITTIMSPEARCTGDVMR 120
Query: 108 DLDGKAVIRNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVA-LVLYKKKGQSKSSWK 166
DLD + +I DFILVSGDV++NI+ L+ KK++ D ++ + L K K+
Sbjct: 121 DLDNRGIITGDFILVSGDVLTNIDFSKMLEFHKKMHLQDKDHISTMCLSKASTYPKTRTI 180
Query: 167 EDLIVAYECDSKKLLMHQ--TPQDNQKKVNIPMENILL--YSKLEICAHLASTGIMICSP 222
E + + + + +Q +++K +I ++ LL + I L I IC+
Sbjct: 181 EPAAFVLDKSTSRCIYYQDLPLPSSREKTSIQIDPELLDNVDEFVIRNDLIDCRIDICTS 240
Query: 223 AVPPLFSDNFDFQT-QEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRD 281
VP +F +NFD+Q+ + F+KGV I+ +IL +Y + D EY + V+ W +Y S+D
Sbjct: 241 HVPLIFQENFDYQSLRTDFVKGV-ISSDILGKHIYAYLTD--EYAVRVESWQTYDTISQD 297
Query: 282 IVQRWVHPFV--------PSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL 333
+ RW +P V +Y Y +IY +DV++ ++ + + IG G+ IGE T++
Sbjct: 298 FLGRWCYPLVLDSNIQDDQTYSYESRHIYKEKDVVLAQSCKIGKCTAIGSGTKIGEGTKI 357
Query: 334 SHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTG 393
+ +IGRNC IG N+R++ S+++D+ I +N + S+++ N +G + +L +GC++G
Sbjct: 358 ENSVIGRNCQIGENIRIKNSFIWDDCIIGNNSIIDHSLIASNATLGSNVRLNDGCIIGFN 417
Query: 394 VLIGN------KTCLSGVKLPSAGADEVDDGNNDSDEEEVPK--------------FKCE 433
V I + T +S L +AG+ D+ +N+ ++++ + E
Sbjct: 418 VKIDDNMDLDRNTKISASPLKNAGSRMYDNESNEQFDQDLDDQTLAVSIVGDKGVGYIYE 477
Query: 434 SEQELDSDESDSESENDVDSVDGQ-GTPPMDDTSL-----------------FYT--EVV 473
SE D D S +E+ +++++ Q + D S+ YT E +
Sbjct: 478 SEVSDDEDSS-TEACKEINTLSNQLDELYLSDDSISSATKKTKKRRTMSVNSIYTDREEI 536
Query: 474 DSLL--------------RGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAIL-VV 518
DS R E D LE+N+ R + NVT EV + A+L V
Sbjct: 537 DSEFEDEDFEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRV 596
Query: 519 KNKPDMDMKSFHTHMMSKINYFLPLFKNYIKNESAQQDCLD-AFEEFAEEN-ESLSVVAG 576
+ ++ N + LFK +E D ++ E+ E++ + ++
Sbjct: 597 YHFIATQTLGPKDAVVKVFNQWGLLFKRQAFDEEEYIDLMNIIMEKIVEQSFDKPDLILF 656
Query: 577 KLLHKLYDKDILSEDIVTKWFNKLEP----SSLRKSVEPFVKWLLEAD 620
L LYD DI+ ED++ KW++ + ++K +V+WL AD
Sbjct: 657 SALVSLYDNDIIEEDVIYKWWDNVSTDPRYDEVKKLTVKWVEWLQNAD 704
>sp|P87163|EI2BE_CANAL Translation initiation factor eIF-2B subunit epsilon OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=GCD6 PE=3
SV=2
Length = 732
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 251/451 (55%), Gaps = 31/451 (6%)
Query: 2 QHKKGKAKSEIQKDEVLQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLS 59
Q K K+K + DE QA+++TD+F F P+ P CLLPL N L+EYTLE L +
Sbjct: 12 QSKSKKSKDLV--DERFQAIVLTDSFETRFMPLTAVHPRCLLPLANVPLIEYTLEFLANA 69
Query: 60 GIEEIIVFCTSHVNQIRELVKRKEKSLVGT----LITLIVSDGCYSFGDVMRDLDGKAVI 115
G+ E+ + C++H +QI+E ++ + +G +T I+S S GD MRDLD + +I
Sbjct: 70 GVNEVYLMCSAHADQIQEYIENSK--WMGDNSPFSVTTIMSIESRSVGDTMRDLDNRGLI 127
Query: 116 RNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVAYEC 175
DF+LVSGDVV+N++ AL+ K+ + D +A ++ + + + A+
Sbjct: 128 AGDFLLVSGDVVTNMDFSKALQFHKQKKAQDKDHIATMVLNQASPLHRTRSQIDPAAFVL 187
Query: 176 D--SKKLLMHQT-PQDNQKKVNIPMENILL---YSKLEICAHLASTGIMICSPAVPPLFS 229
D + + + +Q+ P + KK I ++ LL +L++ L + ICSP VP +F
Sbjct: 188 DKETNRCIFYQSIPPVSGKKTCISIDPELLEDFQGELQVRNDLIDCHVDICSPHVPQIFQ 247
Query: 230 DNFDFQ-TQEHFIKGVLINEEILDCRLYCSVV-DDIEYGISVKDWPSYQIASRDIVQRWV 287
+NFD+Q + F+KGVL ++ +L +Y + D EY V+ W +Y S+DI+ RW
Sbjct: 248 ENFDYQYLRSDFLKGVLTSD-LLKKTIYAYISKDSSEYAARVESWSTYDAISQDILARWC 306
Query: 288 HPFVP--------SYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIG 339
+P VP SY Y NNIY + +++ ++ + IG SS+GE TQ+ + +IG
Sbjct: 307 YPLVPDSNLVEGNSYSYELNNIYKEDKIILAQSCKIGTSTSIGRNSSVGEGTQIKNSVIG 366
Query: 340 RNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNK 399
RNCTIG NV +E SY++DN I+DN + S+++ + +G + L G ++G V+IG+
Sbjct: 367 RNCTIGKNVVIENSYIWDNAVIKDNSVLNRSIVAADAQIGNNVTLSPGSVIGFNVIIGDD 426
Query: 400 TCLSG----VKLPSAGADEVDDGNNDSDEEE 426
+ V+ P +E D +++S+ E+
Sbjct: 427 KVIPHNVKIVETPIVTENEFGDFDDESNSED 457
Score = 36.2 bits (82), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 475 SLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMM 534
++ R E D LE+N+ R + NVT +V +A+ V D T
Sbjct: 572 TVTRAIENNHDIDTALLELNTLRMSMNVTYHDVRSVTTQAL--VNKIVDFITTGTLTPQE 629
Query: 535 SKINYFLP---LFKNYIKNESAQQDCLDAFEEFAE--ENESLSVVAGKLLHKLYDKDILS 589
+ F +FK + + + D L+ EE + + +V + YD +++
Sbjct: 630 AATKIFTKWGIMFKRQVFSPEEEVDLLNIVEEKSSVLDKAYNQIVLFLGVKSFYDMEVVE 689
Query: 590 EDIVTKWFNKLEPSSLRKSVEPFVKWLL 617
E+ + KW+N E +R F+ WL
Sbjct: 690 EENILKWWNDGENDEVRTLAAKFITWLQ 717
>sp|Q13144|EI2BE_HUMAN Translation initiation factor eIF-2B subunit epsilon OS=Homo
sapiens GN=EIF2B5 PE=1 SV=3
Length = 721
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 233/403 (57%), Gaps = 20/403 (4%)
Query: 18 LQAVIVTDTFNRNFFPVP--EPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQI 75
LQAV+V D+F+R FFP+ +P LLPL N L++YTLE L +G++E VFC QI
Sbjct: 43 LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102
Query: 76 RE-LVKRKE-KSLVGTLITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLL 133
+E L+K K + ++ +I S+ S GDV+RD+D KA++R+DF+LV GDV+SNIN+
Sbjct: 103 KEHLLKSKWCRPTSLNVVRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNINIT 162
Query: 134 SALKSFKKINSMDSG-AVALVLYKKKGQSKSS--WKEDLIVAYECDSKKLLMHQTPQDNQ 190
AL+ + ++ +V +++K+ S + +++++VA + + ++L Q Q
Sbjct: 163 RALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVLHFQKTQ-GL 221
Query: 191 KKVNIPMENILLYS-KLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLINEE 249
++ P+ S +E+ L I ICSP V LF+DNFD+QT++ F++G+L+NEE
Sbjct: 222 RRFAFPLSLFQGSSDGVEVRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEE 281
Query: 250 ILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP----------SYKYRRN 299
IL +++ V EYG V + Y D+++RWV+P P S + R+
Sbjct: 282 ILGNQIHMHVTAK-EYGARVSNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRH 340
Query: 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNV 359
NIY +V +G S+L++ V++G G+ IG N +++ +IG C IG NV L+++YL+ V
Sbjct: 341 NIYRGPEVSLGHGSILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGV 400
Query: 360 KIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402
++ ++ S+L N V E L +L + V++G L
Sbjct: 401 RVAAGAQIHQSLLCDNAEVKERVTLKPRSVLTSQVVVGPNITL 443
>sp|P56288|EI2BG_SCHPO Probable translation initiation factor eIF-2B subunit gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif223 PE=1 SV=2
Length = 458
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 166/407 (40%), Gaps = 33/407 (8%)
Query: 6 GKAKSEIQKDEV---LQAVIVTDTFNRNFFPVPE----PYCLLPLVNKCLLEYTLEHLHL 58
G+ + IQ + QAV+ F + +P+ P LLP+ NK +L Y L L
Sbjct: 24 GRNRGNIQLQSIPIEFQAVVFAG-FGNSLYPLTGSDALPKALLPIGNKPMLHYPLYWLEA 82
Query: 59 SGIEEIIVFCT----SHVNQIRELVKRKEKSLVGTLITLIVSDGCYSFGDVMRDLDGKAV 114
+G I+ C +H+N L E + + + D S D +R + +
Sbjct: 83 AGFTSAILICMEEAEAHINAW--LRSGYEGHMRIHVEAPTILDDSKSSADALRAVS--HL 138
Query: 115 IRNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVL-YKKKGQSKSSWKEDLIVAY 173
I+NDF+ +S D + + + L F+ N + VL Y+ ++
Sbjct: 139 IKNDFVCLSCDSIVGLPPIYGLDKFRLDNPSALAVYSPVLKYEHITSQSKEIDAKQLIGI 198
Query: 174 ECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICS----------PA 223
E + +LL ++ D M + + ++ + +L+ I + +
Sbjct: 199 EEKTSRLLYAKSSADVGSDFTFRMSLLWKHPRVTLNTNLSDAHIFVFKHWVIDLIREKES 258
Query: 224 VPPLFSDNFDFQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIV 283
+ + D + + + K + E I + +D+ + G+S ++ + ++D +
Sbjct: 259 ISSIRGDLIPYLVKCQYQKSFTVRENIQRFLSSPNNIDNYDGGLSSQEIKINALIAKDGI 318
Query: 284 QRWVHPFVPSYKYRRNNIYLAE------DVLIGKTSVLKQQVVIGEGSSIGENTQLSHCI 337
+P+Y I DV + + +++ ++ EG++I +N+ + I
Sbjct: 319 ICSRANNLPNYFELNKCIAKLTPEQRLVDVTVSERALVGADCMVNEGTTIKDNSNIKKSI 378
Query: 338 IGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKL 384
IG+NC IG V + S L DN+ +ED + +++ +G SKL
Sbjct: 379 IGKNCVIGKGVVVSNSILMDNIVVEDGVRLESCIVASGAQIGAKSKL 425
>sp|Q9C8F1|IF5Y_ARATH Probable eukaryotic translation initiation factor 5-1
OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1
Length = 439
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 15/109 (13%)
Query: 527 KSFHTHMMSKINYFLPLFKNYIKNES---AQQDCLDAFEEF-----AEENESLSVVAGKL 578
K F ++ K Y L L ++ E+ AQ L+ E F AE + +++V
Sbjct: 337 KGFAKEVIKKKKYLLALM--MMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALV---- 390
Query: 579 LHKLYDKDILSEDIVTKWFNK-LEPSSLRKSVEPFVKWLLEADEESEED 626
+ LYD+DIL ED++ +W+NK ++ S + K+V PF++WL A+ ESEE+
Sbjct: 391 IKGLYDEDILDEDVIVEWYNKGVKSSPVLKNVTPFIEWLQNAESESEEE 439
>sp|Q2UJU5|MPG1_ASPOR Mannose-1-phosphate guanyltransferase OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=mpg1 PE=3 SV=1
Length = 364
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYL 355
+RN+ LA + + V V++ + IG+N ++ + +IG N +G VRL++ L
Sbjct: 239 KRNSKLLAPN---SEPYVYGGNVMVDPSAKIGKNCRIGPNVVIGPNVVVGDGVRLQRCVL 295
Query: 356 FDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
+N K++D+ V+ +++ +N+ VG ++L N +LG V I ++ ++G
Sbjct: 296 LENSKVKDHAWVKSTIVGWNSSVGRWARLENVTVLGDDVTIADEVYVNG 344
>sp|Q54FQ8|EI2BG_DICDI Translation initiation factor eIF-2B subunit gamma OS=Dictyostelium
discoideum GN=eif2b3 PE=3 SV=1
Length = 440
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 265 YGISVKDWPSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEG 324
Y ++V +YQ +RDI + + ++P+ N ++ + T V Q VIG
Sbjct: 316 YCMNVNTIKNYQQINRDIAKGDLQ-YLPNEPKSEKNFFIDPTANVTITQV-GPQCVIGTS 373
Query: 325 SSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVL 372
+++G + IIG++C IG VR+E S + D+V IED C + S++
Sbjct: 374 TTLGAKCSVKFSIIGKHCKIGDGVRIENSIIMDHVIIEDRCVINSSII 421
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 27/204 (13%)
Query: 37 PYCLLPLVNKCLLEYTLEHLHLSGIEE-----IIVFCTSHVNQIRELVKRKEKSLVGTLI 91
P+ LLP+ N+ L+ Y LE L +G E IIV + +I++ V K +
Sbjct: 30 PHSLLPIANRPLISYQLEFLEKAGFETKSEPVIIVVNETSQEKIKQYVSEIYKGKIEVEF 89
Query: 92 -----TLIVSDGCYSFGDVMR-----DLDGKAVIRNDFILVSGDVVSNINLLSALKSFKK 141
L + Y D +R L+ V+ + FI D+ K
Sbjct: 90 FVLKDQLATCEILYRIRDKIRLEYFMVLNANLVLEDTFIRQMADL--------HRKEESS 141
Query: 142 INSMDSGAVALVLYKKKGQSKSSWKEDLI----VAYECDSKKLLMHQTPQDNQKKVNIPM 197
+ + V K KG +++S K+D + +A E S+K++M + + ++ +N
Sbjct: 142 LTVLLKPPTPKVEQKGKGATETSTKQDKLFTDYIALEEKSQKIVMMEPATEVEEDLNFNK 201
Query: 198 ENILLYSKLEICAHLASTGIMICS 221
+ + + I +L T + I S
Sbjct: 202 SLLKYFPNVTIYTNLQDTQLYIFS 225
>sp|Q5B1J4|MPG1_EMENI Mannose-1-phosphate guanyltransferase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=mpg1 PE=3 SV=2
Length = 364
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYL 355
+RN+ LA + + V V++ + IG+N ++ + +IG N IG VRL++ L
Sbjct: 239 KRNSKLLAPN---SEPYVYGGNVMVDPTAKIGKNCRIGPNVVIGPNVVIGDGVRLQRCVL 295
Query: 356 FDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
+N K++D+ ++ +++ +N+ VG ++L N +LG V I ++ ++G
Sbjct: 296 MENSKVKDHAWIKSTIVGWNSSVGRWARLENVTVLGDDVTIADEVYVNG 344
>sp|Q4U3E8|MPG1_ASPFU Mannose-1-phosphate guanyltransferase OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=mpg1 PE=2 SV=1
Length = 364
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYL 355
+RN+ LA + + V V++ + IG+N ++ + +IG N +G VRL++ L
Sbjct: 239 KRNSKLLAPN---SEPYVYGGNVMVDPSAKIGKNCRIGPNVVIGPNVVVGDGVRLQRCVL 295
Query: 356 FDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
+N K++D+ ++ +++ +N+ VG+ ++L N +LG V I ++ ++G
Sbjct: 296 LENSKVKDHAWIKSTIVGWNSSVGKWARLENVTVLGDDVTIADEVYVNG 344
>sp|Q9P8N0|MPG1_PICAN Mannose-1-phosphate guanyltransferase OS=Pichia angusta GN=MPG1
PE=3 SV=1
Length = 364
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 304 AEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIED 363
+E+ + G ++ IG+G IG N +IG NC IG VR+++S + N +I+D
Sbjct: 249 SEEYVNGGNVLIDPSAKIGKGCKIGPN-----VVIGPNCIIGDGVRIQRSTILKNSQIKD 303
Query: 364 NCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKL 407
+ V+ +++ +N+ VG+ ++L +LG V + ++ ++G K+
Sbjct: 304 HAWVKSTIVGWNSTVGKWARLEGVTVLGEDVTVKDEVYVNGGKV 347
>sp|O74484|MPG1_SCHPO Mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mpg1 PE=2 SV=1
Length = 363
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 176/398 (44%), Gaps = 67/398 (16%)
Query: 18 LQAVIVTDTFNRNFFPV----PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVN 73
++A+I+ F P+ P+P L+ NK ++ + +E L +G+ +I++
Sbjct: 1 MKALILVGGFGTRLRPLTLTLPKP--LVEFGNKPMILHQVEALAAAGVTDIVLAVNYRPE 58
Query: 74 QIRELVKRKEKSLVGTLITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLL 133
+ E +K+ EK + + ++ + G + D A + F +++ DV+
Sbjct: 59 IMVEALKKYEKEYNVNITFSVENEPLGTAGPLALARDILAKDHSPFFVLNSDVICEYPF- 117
Query: 134 SALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVAYECDSKKLLMHQTPQDNQKKV 193
+ L +F K + + +V+ K + SK +V + +S+ L+ ++ V
Sbjct: 118 ADLAAFHKAHGAEG---TIVVTKVEEPSKYG-----VVVHYPNSESLI--------ERFV 161
Query: 194 NIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLINEEILDC 253
P+E ++ + GI I +P+V D + + ++
Sbjct: 162 EKPVE---------FVSNRINGGIYILNPSV----LDRIEPRPTS------------IEK 196
Query: 254 RLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAE------DV 307
++ ++V+D Q+ S D+ W+ P +YL+ ++
Sbjct: 197 EVFPAMVND------------KQLHSFDLEGYWMDVGQPKDYLTGTCLYLSSLRKHKPEI 244
Query: 308 LIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCE 366
L +S + V+I ++IG+N ++ + +IG N TIG VRL++ + + ++ D+
Sbjct: 245 LAPASSNIIGNVLIDPSATIGKNCKIGPNVVIGPNVTIGDGVRLQRCAILKSSRVRDHAW 304
Query: 367 VRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
V+ S++ +N+ +G S+L N +LG V++ ++ ++G
Sbjct: 305 VKSSIVGWNSTLGSWSRLENVSVLGDDVVVNDEIYVNG 342
>sp|Q7RVR8|MPG1_NEUCR Mannose-1-phosphate guanyltransferase OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=mpg-1 PE=3 SV=1
Length = 364
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 319 VVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTG 377
V+I + IG+N ++ + IG N +G VRL++ L + K++D+ V+ +++ +N+
Sbjct: 258 VLIDPSAKIGKNCRIGPNVTIGPNVVVGDGVRLQRCVLLEGSKVKDHAWVKSTIVGWNST 317
Query: 378 VGEHSKLLNGCLLGTGVLIGNKTCLSG 404
VG+ ++L N +LG V IG++ ++G
Sbjct: 318 VGKWARLENVTVLGDDVTIGDEIYVNG 344
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 292 PSYKYRRN-----NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGS 346
PS K +N N+ + +V++G V Q+ V+ EGS + ++ + I+G N T+G
Sbjct: 262 PSAKIGKNCRIGPNVTIGPNVVVGD-GVRLQRCVLLEGSKVKDHAWVKSTIVGWNSTVGK 320
Query: 347 NVRLEK-SYLFDNVKIEDNCEVR-LSVLSYNT 376
RLE + L D+V I D V S+L + T
Sbjct: 321 WARLENVTVLGDDVTIGDEIYVNGGSILPHKT 352
>sp|O74624|MPG1_HYPJE Mannose-1-phosphate guanyltransferase OS=Hypocrea jecorina GN=mpg1
PE=1 SV=1
Length = 364
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 318 QVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNT 376
V+I + IG+N ++ + IG + +G VRL++ L K++D+ V+ +++ +N+
Sbjct: 257 NVMIHPSAKIGKNCRIGPNVTIGPDVVVGDGVRLQRCVLLKGSKVKDHAWVKSTIVGWNS 316
Query: 377 GVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
VG ++L N +LG V IG++ ++G
Sbjct: 317 TVGRWARLENVTVLGDDVTIGDEIYVNG 344
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 292 PSYKYRRN-----NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGS 346
PS K +N N+ + DV++G V Q+ V+ +GS + ++ + I+G N T+G
Sbjct: 262 PSAKIGKNCRIGPNVTIGPDVVVGD-GVRLQRCVLLKGSKVKDHAWVKSTIVGWNSTVGR 320
Query: 347 NVRLEK-SYLFDNVKIEDNCEV 367
RLE + L D+V I D V
Sbjct: 321 WARLENVTVLGDDVTIGDEIYV 342
>sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris
GN=EIF5 PE=2 SV=1
Length = 443
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 527 KSFHTHMMSKINYFLPLFKNYIKNESAQQDCLDAFEEF--AEENESLSVVAGKLLHKLYD 584
K F + K NYF + E +Q L A EEF + +L VA +L LYD
Sbjct: 342 KGFGRETLKKKNYFAAA----VAEEGSQILLLHAIEEFCCKPNSNALKEVA-LVLKTLYD 396
Query: 585 KDILSEDIVTKWFNKL-----EPSSLRKSVEPFVKWLLEADEESEED 626
D+L E+ + W+ K + S + K+ +PF+ WL A+ ES+E+
Sbjct: 397 ADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE 443
>sp|P70541|EI2BG_RAT Translation initiation factor eIF-2B subunit gamma OS=Rattus
norvegicus GN=Eif2b3 PE=2 SV=2
Length = 452
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 170/427 (39%), Gaps = 73/427 (17%)
Query: 34 VPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITL 93
+P+P LLP+ NK L+ Y L L G EE+IV T V + + + K + I
Sbjct: 23 IPKP--LLPVGNKPLIWYPLNLLERVGFEEVIVVTTKDVQKA---LCAEFKMKLKPDIVC 77
Query: 94 IVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALV 153
I + D +R + K ++ D +++ D+++++ L + F+ ++ ++A++
Sbjct: 78 IPDEADMGTADSLRHIYPK--LKTDVLVLGCDLITDVALHEVVDLFRAYDA----SLAML 131
Query: 154 LYK----------KKGQSKSSWKEDLIVAYECDSKKLLMHQTPQD-----------NQKK 192
+ K +KG+ K+ + D I + K+LL D QK
Sbjct: 132 MRKGQESTEPVPGQKGKKKTVEQRDFI-GVDSTGKRLLFMANEADLDEELVIKGSILQKH 190
Query: 193 VNIPMENILLYSKLEICAHLASTGIM-------ICSPAVPPLFSDNF---DFQTQEHFIK 242
I + L+ + L +M I S +P L F Q ++ +
Sbjct: 191 PRIHFQTGLVDAHLYCLKKYVVDFLMENKSITSIRSELIPYLVRKQFSSASSQQRQEDKE 250
Query: 243 GVLINEEILDCRLYCSVVDDIEYGISVKD--WPSYQI-----ASRDIVQRWVHPFVPSYK 295
L +E +Y + D ++ D W +++ SR V+ +VH
Sbjct: 251 EDLKKKEPKSLDIYSFIKKDNTLTLAPYDACWNAFRRDKWEDLSRSQVRCYVHIMKEGLC 310
Query: 296 YRRNNIYL----------------AEDVLIGKTSVLKQQVVIGEGSSIGENTQ------L 333
R + + L E+ +I ++ + + +IG S IG +TQ +
Sbjct: 311 SRVSTLGLYMEANRQVPKLLSVLCPEESMIHPSAQIANKHLIGADSLIGSDTQVGEKSSI 370
Query: 334 SHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTG 393
+IG +C I V + L ++V +E+ + SV+ N V E + CL+G+G
Sbjct: 371 KRSVIGSSCVIRDRVTVTNCLLMNSVTVEEGSSIHGSVIC-NNAVVEAGAEIRDCLIGSG 429
Query: 394 VLIGNKT 400
I K
Sbjct: 430 QRIEAKA 436
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 273 PSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQ 332
PS QIA++ ++ + + D +G+ S +K+ V IG I +
Sbjct: 342 PSAQIANKHLIG--------------ADSLIGSDTQVGEKSSIKRSV-IGSSCVIRDRVT 386
Query: 333 LSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGT 392
+++C++ + T+ + S + +N +E E+R ++ + +K +N ++G
Sbjct: 387 VTNCLLMNSVTVEEGSSIHGSVICNNAVVEAGAEIRDCLIGSGQRIEAKAKRMNEVIVGN 446
Query: 393 GVLI 396
L+
Sbjct: 447 DQLM 450
>sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2
SV=1
Length = 451
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 548 IKNESAQQDCLDAFEEFAEE--NESLSVVAGKLLHKLYDKDILSEDIVTKWFNKL----E 601
+ +E AQ + A E F + E+L V +L LYD DIL E+ + W+N +
Sbjct: 366 VPDEGAQTLLVQAIEAFGGKCNPEALKEVP-VVLKALYDGDILDEETIVDWYNDAVAAGK 424
Query: 602 PSSLRKSVEPFVKWLLEADEESEEDD 627
S + K+ +PFV+WL A+ + E DD
Sbjct: 425 DSQVVKNAKPFVEWLQSAESDEEGDD 450
>sp|A3DK82|GLGC_CLOTH Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1
Length = 426
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 273 PSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAEDVLIG---KTSVLKQQVVIGEG----- 324
P+++I + + V+ H P+ +++ +AE +I + SVL V + EG
Sbjct: 271 PAWKIYTPNPVKP-AHYIGPTGSVKKS--IVAEGCMIYGSVRNSVLFPGVYVSEGAEIVD 327
Query: 325 ------SSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTG- 377
S IGENTQ+ CIIG +G NVR+ I +N L Y++G
Sbjct: 328 SIVMSDSVIGENTQIYKCIIGEEVKVGKNVRM---------GIGENIPNELKPHLYDSGI 378
Query: 378 --VGEHSKLLNGCLLGTGVLI 396
VGE + + +GC +G V+I
Sbjct: 379 TVVGEKAVVPDGCQIGKNVVI 399
>sp|Q0HGW5|LPXD_SHESM UDP-3-O-acylglucosamine N-acyltransferase OS=Shewanella sp. (strain
MR-4) GN=lpxD PE=3 SV=1
Length = 341
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSY-LFDNVKI 361
L E V IG +V+ V++GE IG T +IG++C IGSN RL + L+ NV +
Sbjct: 112 LGEGVAIGANAVIGANVILGENVQIGAGT-----VIGQDCIIGSNTRLWANVTLYHNVHL 166
Query: 362 EDNCEVRLSVLSYNTGVG 379
+C + + + G G
Sbjct: 167 GQDCIIHSGAIIGSDGFG 184
>sp|Q0HT72|LPXD_SHESR UDP-3-O-acylglucosamine N-acyltransferase OS=Shewanella sp. (strain
MR-7) GN=lpxD PE=3 SV=1
Length = 341
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSY-LFDNVKI 361
L E V IG +V+ V++GE IG T +IG++C IGSN RL + L+ NV +
Sbjct: 112 LGEGVAIGANAVIGANVILGENVQIGAGT-----VIGQDCIIGSNTRLWANVTLYHNVHL 166
Query: 362 EDNCEVRLSVLSYNTGVG 379
+C + + + G G
Sbjct: 167 GQDCIIHSGAIIGSDGFG 184
>sp|A6UP85|GLMU_METVS Bifunctional protein GlmU OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_0399 PE=3 SV=1
Length = 414
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 70/423 (16%)
Query: 18 LQAVIVTDTFNRNFFPVPE--PYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQI 75
+ AVI+ +P+ E P ++P+ K +LE+ +E + + +E+I + +I
Sbjct: 1 MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIE-NHVEKIYLVVGFEKEKI 59
Query: 76 RELVKRKEKSLVGTLITLIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLLSA 135
+ EK I IV + G + L K I+ DF++++GDV+ ++L
Sbjct: 60 IDYFYGNEK------IEFIVQEKQLGTGHAV--LMAKNYIKGDFLVLNGDVIFESDILEF 111
Query: 136 LK-----SFKKINSMDSGAVALVLYKKK----------GQSKSSWKEDLIVA--YECDSK 178
L K+++ ++ V + Y K + KS + +LI A Y+ ++
Sbjct: 112 LNYENAVGLSKVDNPENFGVIELGYDNKVINLLEKPNEDEIKSKFTSNLINAGIYKLENF 171
Query: 179 --KLLMHQTPQD-NQKKVNIPMENILLYSKL---EICAHLASTGIMICSPAVPPLFSDNF 232
++L + P + + ++ ++ ++ SKL E+ + G P L ++N+
Sbjct: 172 VFEILENLLPSERGEIELTDALKKLIESSKLYGIELNGYWNDIG----RPW-DVLSANNY 226
Query: 233 DFQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFVP 292
+ I G + N + + +V+ IE G++VK S + ++ + F+
Sbjct: 227 FLKNIMPKISGNIEN----NVTITGNVI--IEEGVTVK---SNSVIEGPVIIKS-GAFIG 276
Query: 293 SYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH------CIIGRNC---- 342
Y R N L ED +G +S +K GS I +NT++ H IIG +C
Sbjct: 277 PLAYIRPNTVLMEDTFVGNSSEIK-------GSIIMKNTKIPHLSYVGDSIIGSDCNFGC 329
Query: 343 -TIGSNVRLEKSYLFDNVKIEDNCEVRL--SVLSYNTGVGEHSKLLNGCLLGTGVLIGNK 399
TI +N+R + + N+K VR +V+ N G L+ G +G+ +IG
Sbjct: 330 NTITANLRFDDEPVTLNIKGTKVKSVRKFGAVIGDNVKTGIQVSLMPGVKVGSNSIIG-A 388
Query: 400 TCL 402
CL
Sbjct: 389 NCL 391
>sp|Q6FRY2|MPG12_CANGA Mannose-1-phosphate guanyltransferase 2 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MPG1 PE=3 SV=1
Length = 361
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLF 356
RR+ L+ I +++ I + IG + +IG NC IGS VR+ +S L
Sbjct: 239 RRHPEKLSTGSNIVSNAIIDPTAKISPDAKIGPDV-----VIGPNCVIGSGVRIVRSVLL 293
Query: 357 DNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKL 407
N +++N ++ +++ +++ +G +L +LG V + ++ ++G K+
Sbjct: 294 KNCVVKENSLIKDTIVGWDSTIGRWCRLEGCAVLGHDVAVKDEVYVNGAKV 344
>sp|Q11WA1|LPXD_CYTH3 UDP-3-O-acylglucosamine N-acyltransferase OS=Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469) GN=lpxD PE=3 SV=1
Length = 349
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 321 IGEGSSIGENTQL-SHCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVRLSVLSY-NTG 377
IG+ + IG N + + IG NC IG+NV++ ++Y+ DNV I DN + V Y N
Sbjct: 108 IGKNAVIGSNHYIGAFAYIGSNCKIGNNVKIYPQAYIGDNVTIGDNTTIYAGVKIYANCE 167
Query: 378 VGEHSKLLNGCLLGT 392
+G + +GC++G+
Sbjct: 168 LGNQVTIHSGCVIGS 182
>sp|Q6BN12|MPG1_DEBHA Mannose-1-phosphate guanyltransferase OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=MPG1 PE=3 SV=1
Length = 362
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 335 HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGV 394
+ +IG N +G R+++S L N +++D+ V+ +++ +N+ +G+ ++ +LG V
Sbjct: 273 NVVIGPNVVVGEGARIQRSVLLSNSEVKDHAWVKSTIVGWNSRIGKWARTDGITVLGDDV 332
Query: 395 LIGNKTCLSGVKL 407
I N+ ++G K+
Sbjct: 333 EIKNEVYVNGAKV 345
>sp|A7HY09|LPXD_PARL1 UDP-3-O-acylglucosamine N-acyltransferase OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=lpxD PE=3 SV=1
Length = 353
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 309 IGKTSVLKQQVVIGEGSSIGENTQLS-------HCIIGRNCTIGSNVRLEKSYLFDNVKI 361
+G L+ V IG G IG NT + C +G++C IG NV L ++L D V +
Sbjct: 132 LGTGVTLEPGVTIGAGVEIGNNTVIGTNTSVGKGCTVGKDCFIGPNVTLSHAHLGDRVMV 191
Query: 362 EDNCEVRLSVLSYNTGVGEHSKL 384
+ + G+ H K+
Sbjct: 192 HPGVRIGQDGFGFAMGLPRHEKV 214
>sp|P37820|MPG1_SULAC Putative mannose-1-phosphate guanyltransferase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=mpg1 PE=3 SV=2
Length = 359
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 321 IGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGE 380
IG+ +++GE + + + IIG N IG+ +E+S L ++V + D ++ SV+ +G+
Sbjct: 255 IGDNTTVGEGSSIRNSIIGVNNRIGNGSCVEESILMNDVMLGDFSLIKESVIGDEVSLGK 314
Query: 381 HSKLLNGCLLGTGVLIGNKTCLS 403
++ ++G ++G GVLI ++ ++
Sbjct: 315 WNR-VDGAIIGDGVLIHDQVFIN 336
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQ 74
++ A+++ + P+ +P LLP++ K L++YTL L S ++ I + ++
Sbjct: 1 MVSAIVLAGGYATRLRPLSLTKPKALLPVLGKPLMDYTLYSLASSDVDTIYLSLRVMADK 60
Query: 75 IRELVKRKEKSLVGTLITLIVSDGCYSFGDV--MRDLDGKAVIRNDFILVSGDVVSNINL 132
+ + V K+ +L ++++I GD ++ ++ K + +D I+V GD+ + I+
Sbjct: 61 VLDHV--KQLNLQKNIVSVIEES---RLGDAGPLKFINSKYNLSDDVIVVYGDIYAEIDF 115
>sp|Q3SRI1|LPXD1_NITWN UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=lpxD1 PE=3
SV=1
Length = 362
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCI-IGRNCTIGSNVRLEKSYLFDNVK 360
YL ++V+I +V+ V IG GS IG + + IGR+C +G+ ++ + + +NV
Sbjct: 130 YLEDEVVIDPLAVIGPDVQIGRGSVIGSGAVIGPGVRIGRDCNVGAGTTIQATLIGNNVL 189
Query: 361 IEDNCEV 367
I C +
Sbjct: 190 IHPGCHI 196
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 303 LAEDVLIGKTSVLKQQVVIGEG------SSIGENTQLSHCIIGRNCTIGSNVRLEK---S 353
+ DV IG+ SV+ VIG G ++G T + +IG N I + +
Sbjct: 143 IGPDVQIGRGSVIGSGAVIGPGVRIGRDCNVGAGTTIQATLIGNNVLIHPGCHIGQDGYG 202
Query: 354 YLF------------DNVKIEDNCEVRLSVLS-----YNTGVGEHSKLLNGCLLGTGVLI 396
++F V I+++ E+ +T +GE +K+ N +G V I
Sbjct: 203 FIFFGSEGHVKVPQTGRVLIQNDVEIGAGTTIDRGSLRDTVIGEGTKIDNQVQIGHNVTI 262
Query: 397 GNKTCLSGVKLPSAGADEVDD 417
G + CL ++ AG+ + D
Sbjct: 263 GRR-CLLAAQIGLAGSLTIGD 282
>sp|Q6LN34|LPXD_PHOPR UDP-3-O-acylglucosamine N-acyltransferase OS=Photobacterium
profundum GN=lpxD PE=3 SV=1
Length = 341
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-SHCIIGRNCTIGSNVRLEKSY-LFDNV 359
Y+A+D +IG+ + + VI G+ IG N Q+ + C IG+N IG+ ++ + ++ +V
Sbjct: 105 YIADDAIIGEGAAIGHNAVIESGAQIGANVQIGAGCFIGQNAVIGAGSKVWANVSIYHSV 164
Query: 360 KIEDNCEVRLSVLSYNTGVG 379
+ +C V+ + + G G
Sbjct: 165 TLGSDCLVQSGAVIGSDGFG 184
>sp|O93827|MPG1_CANAL Mannose-1-phosphate guanyltransferase OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=MPG1 PE=1 SV=1
Length = 362
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 306 DVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNC 365
+VLI T+ + +IG + IG N +G R+++S L N +++D+
Sbjct: 255 NVLIDPTAKIHPSALIG-----------PNVTIGPNVVVGEGARIQRSVLLANSQVKDHA 303
Query: 366 EVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKL 407
V+ +++ +N+ +G+ ++ +LG V + N+ ++G K+
Sbjct: 304 WVKSTIVGWNSRIGKWARTEGVTVLGDDVEVKNEIYVNGAKV 345
>sp|Q4QLZ4|LPXD_HAEI8 UDP-3-O-acylglucosamine N-acyltransferase OS=Haemophilus influenzae
(strain 86-028NP) GN=lpxD PE=3 SV=1
Length = 341
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSY-LFD 357
+ + L E+V IG +V+++ VV+G+ IG N C +G+N IGS +L + ++
Sbjct: 111 DGVLLGENVSIGANAVIEEGVVLGDNVIIGAN-----CFVGKNTKIGSGTQLWANVTVYH 165
Query: 358 NVKIEDNCEVRLSVLSYNTGVGEHS--------KLLNGCLLGTGVLIGNKTCL 402
NV+I NC ++ + + G G + + ++G V IG TC+
Sbjct: 166 NVEIGANCLIQSGTVIGSDGFGYANDRGRWIKIPQVGQVIIGNNVEIGANTCI 218
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 300 NIYLAEDVLIGKTSVLKQQVVIG-EGSSIGENT-------QLSHCIIGRNCTIGSNVRLE 351
N+ + +V IG +++ VIG +G + Q+ IIG N IG+N ++
Sbjct: 160 NVTVYHNVEIGANCLIQSGTVIGSDGFGYANDRGRWIKIPQVGQVIIGNNVEIGANTCID 219
Query: 352 KSYLFDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
+ L D IEDN + L +++N +G + + G ++ + +G + CL G
Sbjct: 220 RGAL-DATIIEDNVIIDNLCQIAHNVHIGTGTAVAGGVIMAGSLTVG-RYCLIG 271
>sp|P43888|LPXD_HAEIN UDP-3-O-acylglucosamine N-acyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=lpxD PE=3
SV=1
Length = 341
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSY-LFD 357
+ + L E+V IG +V+++ VV+G+ IG N C +G+N IGS +L + ++
Sbjct: 111 DGVLLGENVSIGANAVIEEGVVLGDNVIIGAN-----CFVGKNTKIGSGTQLWANVTVYH 165
Query: 358 NVKIEDNCEVRLSVLSYNTGVGEHS--------KLLNGCLLGTGVLIGNKTCL 402
NV+I NC ++ + + G G + + ++G V IG TC+
Sbjct: 166 NVEIGANCLIQSGTVIGSDGFGYANDRGRWIKIPQVGQVIIGNNVEIGANTCI 218
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 300 NIYLAEDVLIGKTSVLKQQVVIG-EGSSIGENT-------QLSHCIIGRNCTIGSNVRLE 351
N+ + +V IG +++ VIG +G + Q+ IIG N IG+N ++
Sbjct: 160 NVTVYHNVEIGANCLIQSGTVIGSDGFGYANDRGRWIKIPQVGQVIIGNNVEIGANTCID 219
Query: 352 KSYLFDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404
+ L D IEDN + L +++N +G + + G ++ + +G + CL G
Sbjct: 220 RGAL-DATIIEDNVIIDNLCQIAHNVHIGTGTAVAGGVIMAGSLTVG-RYCLIG 271
>sp|Q9S825|IF5Z_ARATH Probable eukaryotic translation initiation factor 5-2
OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1
Length = 437
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 527 KSFHTHMMSKINYFLPLFKNYIKNESAQQDCLDAFEEFAEEN---ESLSVVAGKLLHKLY 583
K F + K NY ++ + +Q L++ F +N E+L VA +L LY
Sbjct: 332 KGFAKEVTKKKNYLAAAA--TMQEDGSQMHLLNSIGTFCGKNGNEEALKEVA-LVLKALY 388
Query: 584 DKDILSEDIVTKWFNKL-----EPSSLRKSVEPFVKWLLEA 619
D+DI+ E++V W+ K + S + K+V+PFV+WL A
Sbjct: 389 DQDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPFVEWLQSA 429
>sp|Q1QA19|LPXD_PSYCK UDP-3-O-acylglucosamine N-acyltransferase OS=Psychrobacter
cryohalolentis (strain K5) GN=lpxD PE=3 SV=1
Length = 338
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 276 QIASRDIVQRWVHP--FVPSYKYRRNNI------YLAEDVLIGKTSVLKQQVVIGEGSSI 327
QI +R +HP F+ N + + E V IG SVL+ VVI + ++I
Sbjct: 97 QIFARQHSFSGIHPTAFIADSAVIGNKVTIGAFCVIGEQVQIGDRSVLEAHVVIEDNTTI 156
Query: 328 GENTQL-SHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLN 386
G + + S +IG +C IGS+VRL + SV + E L
Sbjct: 157 GTDGVIKSQVVIGHDCIIGSHVRLHAGVTIGSEGFGFAPTANPSVTGW-----ERIAQLG 211
Query: 387 GCLLGTGVLIGNKTCL 402
L+G V IG++TC+
Sbjct: 212 RVLIGDHVRIGSQTCI 227
>sp|A5PJI7|EI2BG_BOVIN Translation initiation factor eIF-2B subunit gamma OS=Bos taurus
GN=EIF2B3 PE=2 SV=1
Length = 452
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 320 VIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVG 379
+IG + +GE + + H +IG +C I V + L ++V +E+ ++ S++ N V
Sbjct: 358 LIGPDTQVGEKSSIKHSVIGSSCVIRDRVTVTNCLLMNSVTVEEGSNIQSSIIC-NDAVI 416
Query: 380 EHSKLLNGCLLGTGVLIGNKT 400
E + CL+G+G I K
Sbjct: 417 EKGADIKNCLIGSGQRIEAKA 437
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 34 VPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITL 93
+P+P LLP+ NK L+ Y L L G EE+IV T V + L K + I
Sbjct: 23 IPKP--LLPVGNKPLIWYPLNLLERVGFEEVIVITTKDVQ--KALCADFNKMKMKLDIVC 78
Query: 94 IVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALV 153
I + D +R + K ++ D +++S D+++++ L + F+ ++ ++A++
Sbjct: 79 IPDEADMGTADSLRHIYQK--LKTDVLVLSCDLITDVALHEVVDLFRAHDA----SLAML 132
Query: 154 LYK----------KKGQSKSSWKEDLIVAYECDSKKLLMHQTPQD 188
+ K +KG+ K+ + D V + K+LL D
Sbjct: 133 MRKGQESLEPVPGQKGKKKAVEQRDF-VGVDSTGKRLLFMANEAD 176
>sp|A1VN50|LPXD_POLNA UDP-3-O-acylglucosamine N-acyltransferase OS=Polaromonas
naphthalenivorans (strain CJ2) GN=lpxD PE=3 SV=1
Length = 355
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLE-KSYLFDNVKI 361
++ V IG + + VIGEG+ I E HC+IG N +G+N RL + + D+ +I
Sbjct: 119 ISPHVSIGAFACIAAGAVIGEGARIAE-----HCVIGANAIVGANSRLSARVTVADDCRI 173
Query: 362 EDNCEVRLSVLSYNTGVG--EHS------KLLNGCLLGTGVLIGNKTCL 402
+ C + + G G H + L +G V IG TC+
Sbjct: 174 GERCIIHPGAVIGADGFGFAPHDGQWVKIEQLGAVRIGNDVEIGANTCI 222
>sp|Q70SJ2|MPG1_KLULA Mannose-1-phosphate guanyltransferase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=MPG1 PE=1 SV=1
Length = 361
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 336 CIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVL 395
+IG N IG VR+ +S N I+D+ V+ +++ +N+ VG+ ++L +LG V
Sbjct: 273 VVIGPNVVIGDGVRITRSVALSNSHIKDHALVKSTIIGWNSTVGKWARLEGVTVLGDDVE 332
Query: 396 IGNKTCLSGVKL 407
+ ++ ++G K+
Sbjct: 333 VKDEIYINGGKV 344
>sp|Q1IQB4|LPXD1_KORVE UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Koribacter
versatilis (strain Ellin345) GN=lpxD1 PE=3 SV=1
Length = 337
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 53/184 (28%)
Query: 287 VHPFV---PSYKYRRNN-----IYLAEDVLIGKTSVLKQQVVIGEGSSIGEN-TQLSHCI 337
+HP P+ K N + + ++V IG VL+ VVI EG +IG+N +H +
Sbjct: 99 IHPTAVISPTAKVGANASIGPYVVIEDNVAIGANCVLRAHVVIYEGVTIGDNFFAHAHAV 158
Query: 338 IGRNCTIGSNVRLEK-------SYLF-------------------DNVKIEDNCEV---- 367
+ +C IG+NV L+ Y F DNV+++ N V
Sbjct: 159 VREHCRIGNNVILQNGVVIGADGYGFARDTDGWYKIAQSGTTILDDNVEVQANSTVDRAS 218
Query: 368 -------------RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSAGADE 414
L ++ + + VGEHS L + L +G L+G ++ AG
Sbjct: 219 IGETHIYADAKIDNLVMIGHGSSVGEHSLLCSQVGLAGSSHVGKNVILAG-QVGVAGHLH 277
Query: 415 VDDG 418
+ DG
Sbjct: 278 IGDG 281
>sp|Q6Z9A3|GMPP3_ORYSJ Probable mannose-1-phosphate guanylyltransferase 3 OS=Oryza sativa
subsp. japonica GN=Os08g0237200 PE=2 SV=1
Length = 361
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLF 356
+R+ LA I ++ + IGEG IG + IG C + VRL + +
Sbjct: 239 KRSANRLATGAHIVGNVLVHESAKIGEGCLIGPDVA-----IGPGCVVEDGVRLSRCTVM 293
Query: 357 DNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL-SGVKLP 408
V+I+ + + S++ +++ VG+ +++ N +LG V +G++ GV LP
Sbjct: 294 RGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYTNGGVILP 346
>sp|A6VUT2|LPXD_MARMS UDP-3-O-acylglucosamine N-acyltransferase OS=Marinomonas sp.
(strain MWYL1) GN=lpxD PE=3 SV=1
Length = 343
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 22/127 (17%)
Query: 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH-------CIIGRNCTIGSNV--- 348
+++ +AED +IG SVL + V IG+GS I N L H CII IG++
Sbjct: 125 DDVLIAEDCVIGAGSVLSRGVKIGKGSRIYSNVTLYHDVEVGEACIIHSGTVIGADGFGF 184
Query: 349 -----------RLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIG 397
+L + +NV+I N + + NT +G K+ N + V+IG
Sbjct: 185 APNDGFWEKIDQLGSVIIGNNVEIGANSTIDRGAIE-NTQIGNGVKIDNQVQIAHNVVIG 243
Query: 398 NKTCLSG 404
+ T ++G
Sbjct: 244 DNTAIAG 250
>sp|B3PIS4|GLMU_CELJU Bifunctional protein GlmU OS=Cellvibrio japonicus (strain Ueda107)
GN=glmU PE=3 SV=1
Length = 453
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 298 RNNIYLAEDVLIGKTSVLKQQVVIGEG-----------SSIGENTQL---SH---CIIGR 340
R N+ DV+I V++ +VV+G+G S IG NT + SH +I
Sbjct: 260 RGNLSAGRDVVIDINCVIEGEVVLGDGVVIEPNCIIINSKIGNNTHIKAFSHIEDAVIAA 319
Query: 341 NCTIGSNVRLE-KSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNK 399
+C IG RL + L D VKI + E + +V++ + V H + +G+GV +G
Sbjct: 320 DCDIGPYARLRPGTNLADAVKIGNFVETKKAVIAKGSKV-NHLSYIGDARVGSGVNVGAG 378
Query: 400 T 400
T
Sbjct: 379 T 379
>sp|Q89LD7|GLMU_BRAJA Bifunctional protein GlmU OS=Bradyrhizobium japonicum (strain USDA
110) GN=glmU PE=3 SV=1
Length = 451
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENT---QLSHCI---IGRNCTIGSNVRLE-K 352
+YL+ D + GK ++ VVIG G SI + T SH + +GRN +IG RL
Sbjct: 262 TVYLSADTVFGKDVTIEPFVVIGPGVSIADGTVIHSFSHIVETTLGRNVSIGPYARLRPG 321
Query: 353 SYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKT 400
+ L D +I + E + + L V H + +G IG T
Sbjct: 322 TSLGDGARIGNFVETKAATLEAGVKV-NHLSYIGDATVGANSNIGAGT 368
>sp|Q0C4B0|GLMU_HYPNA Bifunctional protein GlmU OS=Hyphomonas neptunium (strain ATCC
15444) GN=glmU PE=3 SV=1
Length = 461
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL---SH---CIIGRNCTIGSNVRLE-K 352
++L+ D IG +V++ VV G G + Q+ SH ++G C++G RL
Sbjct: 265 TVFLSHDTQIGADAVIEPNVVFGPGVKVAGGAQIRAFSHLEGAVVGEGCSVGPYARLRPG 324
Query: 353 SYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKL-----LNGCLLGTGVLIGNKT 400
+ L NV I + E + NT +GE +K L +G G IG T
Sbjct: 325 TVLAANVHIGNFVETK------NTAMGEGAKANHLAYLGDGTIGAGANIGAGT 371
>sp|Q251V1|GLMU_DESHY Bifunctional protein GlmU OS=Desulfitobacterium hafniense (strain
Y51) GN=glmU PE=3 SV=1
Length = 453
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 254 RLYCSVVDDIEYGISVKDWPSYQ----IASRDIVQRWVHPFV----PSYKYRRNNIYLAE 305
R YC+ +D+ + + +A + I+ W+ V P + + L
Sbjct: 212 RTYCT--EDVHEALGINSRAQLAAAEDVARQRILSYWMEEGVTIIDPRSTFIEAGVVLQP 269
Query: 306 DVLIGKTSVLKQQVVIGEGSSIGENTQLSHC----------------IIGRNCTIGSNVR 349
DV++ ++LK + + E + IG +T L+ C +IG +CTIG
Sbjct: 270 DVVLQPFTILKGRTQVAEDAVIGPHTTLTDCTVGAGSEVSHTVGNQAVIGGHCTIGPYAY 329
Query: 350 LEK-SYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKL 384
L + L D VK+ D E++ N+ +GE SK+
Sbjct: 330 LRPGTVLQDKVKVGDFVEIK------NSQIGEGSKI 359
>sp|B8FY55|GLMU_DESHD Bifunctional protein GlmU OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=glmU PE=3 SV=1
Length = 453
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 33/156 (21%)
Query: 254 RLYCSVVDDIEYGISVKDWPSYQ----IASRDIVQRWVHPFV----PSYKYRRNNIYLAE 305
R YC+ +D+ + + +A + I+ W+ V P + + L
Sbjct: 212 RTYCT--EDVHEALGINSRAQLAAAEDVARQRILSYWMEEGVTIIDPRSTFIEAGVVLQP 269
Query: 306 DVLIGKTSVLKQQVVIGEGSSIGENTQLSHC----------------IIGRNCTIGSNVR 349
DV++ ++LK + + E + IG +T L+ C +IG +CTIG
Sbjct: 270 DVVLQPFTILKGRTQVAEDAVIGPHTTLTDCTVGAGSEVSHTVGNQAVIGGHCTIGPYAY 329
Query: 350 LEK-SYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKL 384
L + L D VK+ D E++ N+ +GE SK+
Sbjct: 330 LRPGTVLQDKVKVGDFVEIK------NSQIGEGSKI 359
>sp|Q215E0|LPXD1_RHOPB UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Rhodopseudomonas
palustris (strain BisB18) GN=lpxD1 PE=3 SV=1
Length = 358
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCI-IGRNCTIGSNVRLEKSYLFDNVKI 361
L + V + +V+ QV IG GS IG LS + IGR+C +G+ ++ + + +NV I
Sbjct: 131 LEDGVTVDPLAVIGPQVEIGAGSVIGSGAVLSPGVRIGRDCNVGAGTVIQFALIGNNVLI 190
Query: 362 EDNCEV 367
C++
Sbjct: 191 HPGCQI 196
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 299 NNIYLAEDVLIGKTSVLKQQ----VVIGEGSSIGENTQLSHCI-IGRNCTIGSNVRLEKS 353
+ + DV IG + + + VIGEGS I Q+ H + IGR+C I + L S
Sbjct: 216 GRVIIQNDVEIGAGTTIDRGSLRDTVIGEGSKIDNQVQIGHNVTIGRHCLIAAQCGLAGS 275
Query: 354 Y-LFDNVKI 361
L DNV +
Sbjct: 276 LTLGDNVAL 284
>sp|Q941T9|GMPP2_ORYSJ Probable mannose-1-phosphate guanylyltransferase 2 OS=Oryza sativa
subsp. japonica GN=Os01g0847200 PE=2 SV=1
Length = 361
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLF 356
+R+ LA I ++ + IGEG IG + IG C + VRL + +
Sbjct: 239 KRSTNRLATGAHIVGNVLVHESAKIGEGCLIGPDVA-----IGPGCVVEDGVRLSRCTVM 293
Query: 357 DNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL-SGVKLP 408
V I+ + + S++ +++ VG+ +++ N +LG V +G++ GV LP
Sbjct: 294 RGVHIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYTNGGVVLP 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,765,497
Number of Sequences: 539616
Number of extensions: 10801480
Number of successful extensions: 53347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 812
Number of HSP's that attempted gapping in prelim test: 44380
Number of HSP's gapped (non-prelim): 7783
length of query: 627
length of database: 191,569,459
effective HSP length: 124
effective length of query: 503
effective length of database: 124,657,075
effective search space: 62702508725
effective search space used: 62702508725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)