Query psy1482
Match_columns 627
No_of_seqs 458 out of 3321
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 21:39:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 2E-45 6.8E-50 399.8 22.6 349 16-387 19-417 (451)
2 2ggo_A 401AA long hypothetical 100.0 1.2E-41 4.1E-46 364.5 32.5 316 18-385 1-330 (401)
3 3brk_X Glucose-1-phosphate ade 100.0 9.8E-42 3.3E-46 367.1 28.3 340 17-385 12-390 (420)
4 3st8_A Bifunctional protein GL 100.0 1.1E-41 3.9E-46 374.4 28.8 231 16-276 11-251 (501)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 9.9E-40 3.4E-44 356.8 30.6 314 16-367 10-340 (468)
6 4fce_A Bifunctional protein GL 100.0 3.8E-39 1.3E-43 351.3 28.3 315 17-368 8-336 (459)
7 3jui_A Translation initiation 100.0 1.8E-39 6.1E-44 303.8 16.0 165 463-627 9-182 (182)
8 2v0h_A Bifunctional protein GL 100.0 4.7E-38 1.6E-42 342.4 29.0 315 17-368 5-333 (456)
9 1paq_A Translation initiation 100.0 8.7E-37 3E-41 288.0 14.5 162 466-627 20-188 (189)
10 3juk_A UDP-glucose pyrophospho 100.0 2.3E-29 7.9E-34 255.8 18.5 238 17-286 2-272 (281)
11 4ecm_A Glucose-1-phosphate thy 100.0 9.2E-28 3.1E-32 242.3 20.0 233 15-285 22-260 (269)
12 3pnn_A Conserved domain protei 99.9 2.4E-27 8.1E-32 243.1 17.9 254 17-287 5-294 (303)
13 1tzf_A Glucose-1-phosphate cyt 99.9 2E-26 6.9E-31 231.2 22.6 224 18-284 3-250 (259)
14 2e3d_A UTP--glucose-1-phosphat 99.9 1.2E-26 4.1E-31 238.3 19.8 237 17-285 8-282 (302)
15 2ux8_A Glucose-1-phosphate uri 99.9 1.7E-26 5.7E-31 236.6 17.7 239 15-285 12-280 (297)
16 1lvw_A Glucose-1-phosphate thy 99.9 1.1E-25 3.8E-30 229.3 21.2 229 16-283 2-241 (295)
17 2pa4_A UTP-glucose-1-phosphate 99.9 6.7E-26 2.3E-30 234.6 18.2 240 15-285 10-283 (323)
18 1mc3_A Glucose-1-phosphate thy 99.9 1.1E-25 3.9E-30 229.3 17.1 231 17-283 3-241 (296)
19 1fxo_A Glucose-1-phosphate thy 99.9 3.1E-25 1E-29 226.0 19.2 227 18-283 3-240 (293)
20 4evw_A Nucleoside-diphosphate- 99.9 1.2E-25 4.2E-30 224.4 11.6 220 20-280 2-243 (255)
21 3d3m_A Eukaryotic translation 99.9 1.7E-24 5.8E-29 200.4 15.6 149 471-619 3-168 (168)
22 2qh5_A PMI, ALGA, mannose-6-ph 99.9 4.3E-24 1.5E-28 219.5 14.0 236 17-281 4-281 (308)
23 2ful_A EIF-5, eukaryotic trans 99.9 6.1E-24 2.1E-28 196.3 10.1 109 505-626 50-167 (177)
24 3oam_A 3-deoxy-manno-octuloson 99.9 1.2E-22 4.2E-27 202.5 16.6 243 18-285 3-250 (252)
25 2x65_A Mannose-1-phosphate gua 99.9 9.8E-23 3.3E-27 211.2 11.6 232 17-278 1-270 (336)
26 2iu1_A EIF5, eukaryotic transl 99.9 3.1E-22 1.1E-26 189.0 13.2 120 488-625 31-160 (208)
27 1jyk_A LICC protein, CTP:phosp 99.9 2.6E-22 8.8E-27 200.4 12.5 217 17-282 25-250 (254)
28 2cu2_A Putative mannose-1-phos 99.9 1.7E-21 5.7E-26 202.1 12.3 228 18-280 3-267 (337)
29 3l6a_A Eukaryotic translation 99.8 1.4E-20 4.8E-25 195.2 15.5 150 470-619 198-364 (364)
30 3tqd_A 3-deoxy-manno-octuloson 99.8 6.8E-20 2.3E-24 182.1 15.2 239 18-280 10-254 (256)
31 3k8d_A 3-deoxy-manno-octuloson 99.8 1.1E-19 3.9E-24 181.3 15.0 237 18-280 19-261 (264)
32 2xme_A CTP-inositol-1-phosphat 99.8 8.1E-19 2.8E-23 172.7 14.7 210 16-280 17-230 (232)
33 2icy_A Probable UTP-glucose-1- 99.8 1.8E-18 6.3E-23 184.4 17.1 239 16-283 78-373 (469)
34 2y6p_A 3-deoxy-manno-octuloson 99.8 2.7E-18 9.4E-23 169.0 16.7 222 18-281 3-230 (234)
35 4fcu_A 3-deoxy-manno-octuloson 99.8 7.6E-18 2.6E-22 167.1 14.8 235 18-284 2-250 (253)
36 1h7e_A 3-deoxy-manno-octuloson 99.7 1.3E-16 4.5E-21 158.1 18.6 226 18-283 3-238 (245)
37 1vic_A 3-deoxy-manno-octuloson 99.7 1.9E-16 6.3E-21 158.7 19.6 238 18-286 3-255 (262)
38 1ug3_A EIF4GI, eukaryotic prot 99.7 9.2E-18 3.2E-22 173.8 9.5 127 469-600 208-335 (339)
39 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 1.9E-16 6.6E-21 166.7 19.2 74 119-226 13-89 (374)
40 3r8y_A 2,3,4,5-tetrahydropyrid 99.7 6.3E-17 2.2E-21 159.8 10.5 176 224-404 9-200 (240)
41 3ixc_A Hexapeptide transferase 99.7 5E-16 1.7E-20 147.7 15.2 115 295-409 28-152 (191)
42 1xhd_A Putative acetyltransfer 99.7 9.6E-16 3.3E-20 143.4 15.6 113 297-409 9-130 (173)
43 3tv0_A Dynactin subunit 6; LEF 99.7 1E-15 3.6E-20 145.9 15.3 112 297-408 9-141 (194)
44 3r3r_A Ferripyochelin binding 99.6 1.6E-15 5.6E-20 143.8 15.2 114 296-409 11-140 (187)
45 1v3w_A Ferripyochelin binding 99.6 2.1E-15 7E-20 141.1 15.3 114 296-409 6-128 (173)
46 2i5k_A UTP--glucose-1-phosphat 99.6 2.4E-15 8.4E-20 161.3 16.9 191 15-230 90-322 (488)
47 3r1w_A Carbonic anhydrase; bet 99.6 3.2E-15 1.1E-19 142.0 15.0 114 296-409 15-144 (189)
48 2vsh_A TARI, 2-C-methyl-D-eryt 99.6 4E-15 1.4E-19 146.4 11.3 217 16-281 1-232 (236)
49 3mqg_A Lipopolysaccharides bio 99.6 1.8E-14 6E-19 137.2 14.8 108 295-402 10-135 (192)
50 1ezi_A CMP-N-acetylneuraminic 99.6 5.3E-15 1.8E-19 144.9 11.1 208 18-281 5-222 (228)
51 3vbi_A ANTD, galactoside O-ace 99.6 2E-14 7E-19 138.3 14.4 110 300-409 32-168 (205)
52 2pig_A Putative transferase; S 99.6 2.7E-15 9.3E-20 153.6 8.7 139 266-405 26-197 (334)
53 4eqy_A Acyl-[acyl-carrier-prot 99.6 2.4E-14 8.2E-19 144.8 15.6 55 296-350 30-85 (283)
54 3r0s_A Acyl-[acyl-carrier-prot 99.6 3.3E-14 1.1E-18 142.4 16.3 104 298-401 32-158 (266)
55 3mqg_A Lipopolysaccharides bio 99.6 3.2E-14 1.1E-18 135.4 14.7 116 295-410 4-137 (192)
56 4eqy_A Acyl-[acyl-carrier-prot 99.6 4.3E-14 1.5E-18 142.9 16.4 116 294-409 46-183 (283)
57 3kwd_A Carbon dioxide concentr 99.6 5.5E-14 1.9E-18 136.0 16.3 102 300-402 39-161 (213)
58 2ggo_A 401AA long hypothetical 99.6 2.2E-14 7.4E-19 152.9 14.6 117 294-410 256-391 (401)
59 3r0s_A Acyl-[acyl-carrier-prot 99.6 5.6E-14 1.9E-18 140.7 16.6 109 294-402 10-141 (266)
60 4e6u_A Acyl-[acyl-carrier-prot 99.6 5.3E-14 1.8E-18 140.9 16.2 108 295-402 32-161 (265)
61 3hsq_A Acyl-[acyl-carrier-prot 99.6 4.9E-14 1.7E-18 140.6 15.8 100 295-394 25-146 (259)
62 1j2z_A Acyl-[acyl-carrier-prot 99.5 6.5E-14 2.2E-18 140.4 16.4 74 295-368 8-95 (270)
63 3fs8_A QDTC; acetyltransferase 99.5 8.2E-14 2.8E-18 140.3 16.6 115 294-408 14-145 (273)
64 2dpw_A Hypothetical protein TT 99.5 9.1E-16 3.1E-20 150.8 1.8 200 18-276 3-231 (232)
65 2xwl_A 2-C-methyl-D-erythritol 99.5 6.7E-14 2.3E-18 136.4 15.0 207 18-282 3-218 (223)
66 3hsq_A Acyl-[acyl-carrier-prot 99.5 9.9E-14 3.4E-18 138.5 16.4 106 294-399 6-133 (259)
67 3rsb_A Adenosylcobinamide-phos 99.5 3.8E-14 1.3E-18 135.3 12.9 117 18-141 1-119 (196)
68 4e6u_A Acyl-[acyl-carrier-prot 99.5 1.3E-13 4.5E-18 138.1 16.8 109 294-402 13-143 (265)
69 1jv1_A Glcnac1P uridyltransfer 99.5 3.6E-14 1.2E-18 152.9 13.5 195 16-230 101-343 (505)
70 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 1.9E-13 6.5E-18 141.8 18.4 101 267-367 74-178 (341)
71 1qre_A Carbonic anhydrase; bet 99.5 7.4E-14 2.5E-18 138.3 14.6 103 299-402 58-190 (247)
72 3c8v_A Putative acetyltransfer 99.5 3.6E-14 1.2E-18 152.2 13.0 110 300-409 273-388 (496)
73 4e79_A UDP-3-O-acylglucosamine 99.5 1.5E-13 5.1E-18 143.2 17.2 71 297-367 111-183 (357)
74 1j2z_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.8E-18 138.7 15.3 110 294-403 25-156 (270)
75 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 2.3E-13 7.9E-18 142.4 18.2 16 352-367 222-237 (372)
76 2qia_A UDP-N-acetylglucosamine 99.5 2.1E-13 7E-18 136.5 16.6 72 296-367 13-98 (262)
77 2qia_A UDP-N-acetylglucosamine 99.5 1.8E-13 6.2E-18 136.9 16.1 108 294-401 29-158 (262)
78 3kwd_A Carbon dioxide concentr 99.5 1.5E-13 5.1E-18 133.0 14.9 109 294-403 51-179 (213)
79 3f1c_A Putative 2-C-methyl-D-e 99.5 1E-13 3.5E-18 137.3 13.1 224 17-285 3-235 (246)
80 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 1.4E-13 4.8E-18 139.8 13.3 108 300-408 151-276 (316)
81 3eg4_A 2,3,4,5-tetrahydropyrid 99.5 5.7E-14 2E-18 142.3 10.4 110 299-409 140-267 (304)
82 3c8v_A Putative acetyltransfer 99.5 1.6E-14 5.3E-19 155.0 6.6 100 297-397 288-394 (496)
83 2yc3_A 2-C-methyl-D-erythritol 99.5 8.1E-14 2.8E-18 136.3 11.0 117 17-142 4-126 (228)
84 1qre_A Carbonic anhydrase; bet 99.5 4.1E-13 1.4E-17 132.9 15.7 107 296-403 73-208 (247)
85 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 4.2E-13 1.4E-17 140.4 16.5 88 297-384 128-237 (372)
86 3gos_A 2,3,4,5-tetrahydropyrid 99.5 2E-13 7E-18 136.8 13.3 50 359-408 178-235 (276)
87 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 3.7E-13 1.3E-17 139.5 15.6 89 297-385 124-238 (341)
88 1vgw_A 4-diphosphocytidyl-2C-m 99.5 1.4E-13 4.6E-18 135.0 11.7 207 17-280 6-226 (231)
89 4e79_A UDP-3-O-acylglucosamine 99.5 4.4E-13 1.5E-17 139.7 15.8 84 301-384 133-242 (357)
90 3fs8_A QDTC; acetyltransferase 99.5 5.3E-13 1.8E-17 134.3 15.6 99 302-400 4-119 (273)
91 1qwj_A Cytidine monophospho-N- 99.5 1.2E-13 4.1E-18 135.3 10.5 209 17-283 3-221 (229)
92 1v3w_A Ferripyochelin binding 99.5 3.8E-13 1.3E-17 125.6 13.3 102 295-396 23-133 (173)
93 3t57_A UDP-N-acetylglucosamine 99.5 6.9E-13 2.4E-17 135.4 16.3 54 297-350 16-70 (305)
94 1xhd_A Putative acetyltransfer 99.5 5.8E-13 2E-17 124.4 13.9 97 295-391 25-130 (173)
95 3t57_A UDP-N-acetylglucosamine 99.5 9E-13 3.1E-17 134.5 16.3 57 294-350 31-92 (305)
96 3gos_A 2,3,4,5-tetrahydropyrid 99.5 4.9E-13 1.7E-17 134.0 14.0 103 306-409 104-217 (276)
97 3eg4_A 2,3,4,5-tetrahydropyrid 99.5 4.5E-13 1.5E-17 135.7 13.6 103 306-409 129-242 (304)
98 3r5d_A Tetrahydrodipicolinate 99.4 8.9E-14 3.1E-18 138.5 7.9 106 302-410 180-295 (347)
99 3r3r_A Ferripyochelin binding 99.4 5.5E-13 1.9E-17 126.2 12.8 91 295-385 28-134 (187)
100 3tk8_A 2,3,4,5-tetrahydropyrid 99.4 3.2E-13 1.1E-17 137.1 11.7 108 303-410 142-259 (316)
101 3bfp_A Acetyltransferase; LEFT 99.4 2.6E-12 8.9E-17 122.2 17.3 122 265-402 50-176 (194)
102 3ixc_A Hexapeptide transferase 99.4 9.5E-13 3.3E-17 125.0 12.8 73 295-367 46-127 (191)
103 3jqy_B NEUO, polysialic acid O 99.4 7.5E-13 2.6E-17 131.4 12.4 104 299-402 62-196 (252)
104 3bfp_A Acetyltransferase; LEFT 99.4 1.7E-12 5.7E-17 123.6 14.3 99 298-408 85-186 (194)
105 3tv0_A Dynactin subunit 6; LEF 99.4 2.3E-12 7.7E-17 122.7 14.9 104 294-408 24-147 (194)
106 3fsy_A Tetrahydrodipicolinate 99.4 3.2E-13 1.1E-17 133.5 9.1 106 302-410 157-272 (332)
107 3r1w_A Carbonic anhydrase; bet 99.4 1.1E-12 3.7E-17 124.4 12.6 73 295-367 32-119 (189)
108 4ea9_A Perosamine N-acetyltran 99.4 2E-12 6.7E-17 125.8 14.3 84 319-402 112-198 (220)
109 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 2.3E-12 7.9E-17 135.5 15.9 66 302-367 138-205 (374)
110 4ea9_A Perosamine N-acetyltran 99.4 4.3E-12 1.5E-16 123.4 16.5 132 266-408 75-208 (220)
111 1vpa_A 2-C-methyl-D-erythritol 99.4 3.5E-12 1.2E-16 125.2 15.5 119 14-142 10-135 (234)
112 2wlg_A Polysialic acid O-acety 99.4 2.5E-12 8.7E-17 124.5 13.4 111 299-409 35-171 (215)
113 4fce_A Bifunctional protein GL 99.4 1.6E-12 5.6E-17 140.8 13.5 116 294-410 280-432 (459)
114 3vbi_A ANTD, galactoside O-ace 99.4 4.7E-12 1.6E-16 121.7 14.1 52 300-351 52-107 (205)
115 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 4.5E-12 1.5E-16 124.9 13.9 101 295-408 98-208 (240)
116 2v0h_A Bifunctional protein GL 99.3 3.1E-12 1.1E-16 138.5 12.6 74 294-368 277-351 (456)
117 3nz2_A Hexapeptide-repeat cont 99.3 1E-12 3.5E-17 125.1 7.4 101 302-402 58-165 (195)
118 3fsy_A Tetrahydrodipicolinate 99.3 7.8E-12 2.7E-16 123.6 12.1 96 294-390 161-270 (332)
119 1hm9_A GLMU, UDP-N-acetylgluco 99.3 5.9E-12 2E-16 136.8 12.3 71 296-368 288-359 (468)
120 2wee_A MOBA-related protein; u 99.3 6.9E-12 2.4E-16 119.5 10.8 110 17-138 5-120 (197)
121 1i52_A 4-diphosphocytidyl-2-C- 99.3 1E-11 3.5E-16 122.0 11.7 115 17-141 7-126 (236)
122 2waw_A MOBA relate protein; un 99.3 1.4E-11 4.7E-16 117.5 12.1 111 17-138 5-120 (199)
123 3r5d_A Tetrahydrodipicolinate 99.3 9.6E-12 3.3E-16 124.0 11.0 93 295-388 185-291 (347)
124 2rij_A Putative 2,3,4,5-tetrah 99.3 9.7E-12 3.3E-16 127.9 11.3 137 265-410 171-329 (387)
125 3hjj_A Maltose O-acetyltransfe 99.3 1.6E-11 5.6E-16 116.3 11.8 100 303-402 60-167 (190)
126 2oeg_A UTP-glucose-1-phosphate 99.3 6.1E-12 2.1E-16 134.7 9.2 160 17-187 75-289 (505)
127 3jqy_B NEUO, polysialic acid O 99.3 1.9E-11 6.6E-16 121.2 11.2 104 299-409 84-207 (252)
128 3oc9_A UDP-N-acetylglucosamine 99.2 4.3E-11 1.5E-15 124.1 13.9 196 15-229 33-275 (405)
129 2px7_A 2-C-methyl-D-erythritol 99.2 1.7E-11 5.9E-16 120.4 9.9 106 18-142 26-134 (236)
130 2pig_A Putative transferase; S 99.2 3.9E-11 1.3E-15 122.8 12.5 89 295-384 78-194 (334)
131 3ftt_A Putative acetyltransfer 99.2 1.9E-11 6.6E-16 116.6 9.1 49 304-352 58-111 (199)
132 2yqc_A UDP-N-acetylglucosamine 99.2 6.3E-11 2.2E-15 127.2 13.4 195 16-230 102-352 (486)
133 3q80_A 2-C-methyl-D-erythritol 99.2 1E-10 3.5E-15 114.1 13.7 114 17-141 7-127 (231)
134 3q1x_A Serine acetyltransferas 99.2 1.7E-11 5.7E-16 123.8 8.3 52 299-350 162-216 (313)
135 1krr_A Galactoside O-acetyltra 99.2 6.6E-11 2.2E-15 112.6 10.6 99 303-401 58-163 (203)
136 3q1x_A Serine acetyltransferas 99.2 5E-11 1.7E-15 120.3 10.3 33 370-402 224-256 (313)
137 3nz2_A Hexapeptide-repeat cont 99.2 1E-10 3.4E-15 111.2 11.8 38 372-409 129-166 (195)
138 3st8_A Bifunctional protein GL 99.2 9.6E-11 3.3E-15 128.2 13.3 96 305-400 339-442 (501)
139 3srt_A Maltose O-acetyltransfe 99.1 8.3E-11 2.8E-15 111.1 9.3 49 303-351 59-112 (188)
140 1ocx_A Maltose O-acetyltransfe 99.1 1.2E-10 4.1E-15 109.2 9.7 46 306-351 58-108 (182)
141 2p2o_A Maltose transacetylase; 99.1 1.2E-10 4E-15 109.6 9.6 39 314-352 70-111 (185)
142 3hjj_A Maltose O-acetyltransfe 99.1 3.8E-10 1.3E-14 106.8 12.8 37 373-409 132-168 (190)
143 3srt_A Maltose O-acetyltransfe 99.1 2E-10 7E-15 108.4 10.4 74 336-409 77-166 (188)
144 3ftt_A Putative acetyltransfer 99.1 1.7E-10 5.9E-15 110.0 9.8 10 336-345 101-110 (199)
145 2wlg_A Polysialic acid O-acety 99.1 2.9E-10 9.9E-15 109.9 11.5 109 300-409 58-181 (215)
146 1yp2_A Glucose-1-phosphate ade 99.1 1.7E-10 5.9E-15 124.6 10.8 100 301-407 331-450 (451)
147 1krr_A Galactoside O-acetyltra 99.1 4E-10 1.4E-14 107.2 12.1 38 372-409 128-165 (203)
148 3brk_X Glucose-1-phosphate ade 99.1 1.5E-10 5.3E-15 123.7 9.9 90 315-406 299-393 (420)
149 4hur_A Virginiamycin A acetylt 99.1 1.3E-10 4.3E-15 112.8 8.0 51 300-350 29-81 (220)
150 3d5n_A Q97W15_sulso; NESG, SSR 99.1 8.7E-11 3E-15 112.0 6.0 105 18-139 3-112 (197)
151 4hur_A Virginiamycin A acetylt 99.1 2.1E-10 7.2E-15 111.2 8.2 39 372-410 116-154 (220)
152 3f1x_A Serine acetyltransferas 99.1 6.3E-10 2.1E-14 112.0 11.6 16 300-315 190-205 (310)
153 1e5k_A Molybdopterin-guanine d 99.1 3.9E-10 1.3E-14 107.8 9.4 106 17-138 6-116 (201)
154 3mc4_A WW/RSP5/WWP domain:bact 99.0 9.2E-10 3.1E-14 109.3 10.5 14 217-230 93-106 (287)
155 3mc4_A WW/RSP5/WWP domain:bact 99.0 1.2E-09 4.1E-14 108.5 10.5 17 300-316 164-180 (287)
156 1ocx_A Maltose O-acetyltransfe 99.0 1.5E-09 5.3E-14 101.6 10.6 11 356-366 96-106 (182)
157 2rij_A Putative 2,3,4,5-tetrah 99.0 1.1E-09 3.7E-14 112.7 10.2 95 294-396 217-327 (387)
158 2p2o_A Maltose transacetylase; 99.0 1.9E-09 6.5E-14 101.3 11.0 15 319-333 95-109 (185)
159 2e8b_A Probable molybdopterin- 98.9 4.5E-10 1.5E-14 107.4 5.0 93 17-127 14-108 (201)
160 1ssq_A SAT, serine acetyltrans 98.9 3E-09 1E-13 105.0 10.6 28 116-143 19-48 (267)
161 3f1x_A Serine acetyltransferas 98.9 2.8E-09 9.5E-14 107.3 10.2 31 303-333 187-219 (310)
162 1ssq_A SAT, serine acetyltrans 98.9 5.6E-09 1.9E-13 103.1 11.9 16 336-351 164-179 (267)
163 1t3d_A SAT, serine acetyltrans 98.9 5E-09 1.7E-13 104.3 10.6 28 116-143 39-68 (289)
164 3ngw_A Molybdopterin-guanine d 98.9 6.5E-09 2.2E-13 99.6 11.0 107 18-141 1-110 (208)
165 1t3d_A SAT, serine acetyltrans 98.9 9.1E-09 3.1E-13 102.4 11.9 16 301-316 158-173 (289)
166 1w55_A ISPD/ISPF bifunctional 98.8 4.4E-09 1.5E-13 109.5 7.7 109 18-141 4-116 (371)
167 4e8l_A Virginiamycin A acetylt 98.8 1.2E-08 4.1E-13 98.2 8.7 47 303-350 31-80 (219)
168 3eev_A Chloramphenicol acetylt 98.8 6.2E-09 2.1E-13 100.2 6.7 16 335-350 58-73 (212)
169 1mr7_A Streptogramin A acetylt 98.8 9.6E-09 3.3E-13 98.3 7.5 105 305-410 28-148 (209)
170 4e8l_A Virginiamycin A acetylt 98.7 1.5E-08 5.3E-13 97.4 7.7 36 374-409 117-152 (219)
171 3eev_A Chloramphenicol acetylt 98.7 2.1E-08 7.2E-13 96.5 8.7 37 373-409 109-145 (212)
172 1mr7_A Streptogramin A acetylt 98.6 2.6E-08 8.8E-13 95.3 6.4 35 299-333 28-75 (209)
173 1xat_A Xenobiotic acetyltransf 98.6 6.3E-08 2.2E-12 92.6 8.6 17 334-350 55-71 (212)
174 1xat_A Xenobiotic acetyltransf 98.6 1.2E-07 4.2E-12 90.6 9.9 36 298-333 20-71 (212)
175 3r3i_A UTP--glucose-1-phosphat 98.3 7.3E-06 2.5E-10 87.2 14.3 195 15-228 125-362 (528)
176 3gue_A UTP-glucose-1-phosphate 97.6 0.001 3.5E-08 70.2 15.8 136 17-158 76-249 (484)
177 3ogz_A UDP-sugar pyrophosphory 96.7 0.0057 1.9E-07 66.3 10.6 141 17-165 114-308 (630)
178 2i5e_A Hypothetical protein MM 95.9 0.0043 1.5E-07 58.9 3.8 105 16-137 2-111 (211)
179 1h2v_C 80 kDa nuclear CAP bind 94.7 0.19 6.4E-06 56.9 12.3 117 471-597 480-604 (771)
180 3c5t_B Exendin-4, exenatide; l 65.0 2.6 8.9E-05 26.0 1.3 13 607-619 9-21 (31)
181 2ion_A PDCD4, programmed cell 63.1 76 0.0026 27.6 12.0 118 466-595 6-127 (152)
182 2rg8_A Programmed cell death p 62.5 83 0.0028 27.8 13.3 121 466-599 7-130 (165)
183 1qg8_A Protein (spore coat pol 54.3 74 0.0025 29.5 10.6 97 40-141 6-115 (255)
184 4adz_A CSOR; transcription, co 53.1 48 0.0016 28.2 7.5 39 474-512 66-104 (136)
185 2nsz_A Programmed cell death p 52.9 1E+02 0.0035 25.9 12.1 115 467-593 5-123 (129)
186 2g49_C Glucagon preproprotein; 48.1 7.4 0.00025 23.7 1.3 12 607-618 17-28 (29)
187 2l63_A GLP-2, glucagon-like pe 42.7 11 0.00037 23.7 1.5 13 607-619 17-29 (33)
188 4b8b_A General negative regula 42.6 2.2E+02 0.0074 30.6 12.2 113 467-584 446-559 (603)
189 1jrj_A Exendin-4; Trp-CAGE, GL 41.7 11 0.00038 24.6 1.5 13 607-619 17-29 (39)
190 3cgx_A Putative nucleotide-dip 40.4 28 0.00094 33.1 4.8 84 46-138 37-127 (242)
191 1t5q_A Gastric inhibitory poly 38.2 15 0.0005 22.6 1.5 11 608-618 18-28 (30)
192 3qml_C Protein SLS1, nucleotid 37.4 1.7E+02 0.0057 28.7 9.7 72 550-621 173-268 (315)
193 2b4n_A Gastric inhibitory poly 36.4 18 0.00063 23.9 1.9 15 607-621 17-31 (42)
194 3iol_B Glucagon; receptor-liga 36.2 16 0.00055 22.6 1.5 12 607-618 17-28 (31)
195 3bcv_A Putative glycosyltransf 35.7 89 0.003 28.6 7.6 93 40-141 10-111 (240)
196 3eiq_C Programmed cell death p 33.1 1.8E+02 0.0062 29.2 9.7 129 447-589 33-164 (358)
197 1xhb_A Polypeptide N-acetylgal 32.9 1.5E+02 0.0052 30.7 9.7 96 40-142 34-142 (472)
198 2zu6_B Programmed cell death p 28.6 4.2E+02 0.014 25.8 14.1 119 467-598 1-122 (307)
199 2hh7_A Hypothetical protein CS 27.6 1E+02 0.0035 25.6 5.5 43 474-520 24-66 (119)
200 1ug3_A EIF4GI, eukaryotic prot 24.9 3.7E+02 0.013 26.5 10.4 112 466-590 8-123 (339)
201 2rrh_A VIP peptides; peptide h 23.4 37 0.0013 20.6 1.5 12 607-618 17-28 (29)
202 3toe_A MTH10B, DNA/RNA-binding 22.5 79 0.0027 24.9 3.7 31 40-70 6-38 (91)
203 2d7i_A Polypeptide N-acetylgal 21.9 1.2E+02 0.004 32.7 6.4 94 40-141 117-223 (570)
204 3aai_A Copper homeostasis oper 20.4 1.3E+02 0.0044 23.8 4.6 42 474-519 28-70 (94)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=2e-45 Score=399.81 Aligned_cols=349 Identities=16% Similarity=0.246 Sum_probs=258.4
Q ss_pred CceEEEEEeCCCCCCCCcC--CCCccccccCCe-ehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCe---
Q psy1482 16 EVLQAVIVTDTFNRNFFPV--PEPYCLLPLVNK-CLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGT--- 89 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~-pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~--- 89 (627)
..|+|||||||+|+||+|| .+||+|+||+|+ |||+|+|+.|..+|+++|+|+++++.+++.+|+.. .|+ .++
T Consensus 19 ~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~-~~~-~~~~~~ 96 (451)
T 1yp2_A 19 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSR-AYA-SNMGGY 96 (451)
T ss_dssp HHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHH-HCC-------
T ss_pred cceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhh-hhh-cccccc
Confidence 3589999999999999999 889999999999 99999999999999999999999988899999875 231 011
Q ss_pred ----eEEEEe--CC-----CCcchhhhhhcccccCCcc----CCEEEEeCCeeccccHHHHHHHHHHHhcCCCCceEEEE
Q psy1482 90 ----LITLIV--SD-----GCYSFGDVMRDLDGKAVIR----NDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVL 154 (627)
Q Consensus 90 ----~v~~i~--~~-----~~~~~gdalr~l~~~~~i~----~dfll~~gD~i~~~~l~~~l~~h~~~~~~~~~~~~T~~ 154 (627)
.+.++. +. ...|++++++. +...+. ++|++++||++++.++..+++.|++. ++.+|++
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~--a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~tl~ 169 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQ--YLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRET-----DADITVA 169 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHH--THHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHT-----TCSEEEE
T ss_pred cccCcEEEecccccccccccccCcHHHHHH--HHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHc-----CCcEEEE
Confidence 133432 21 24799999984 333343 57999999999999999999999875 5788888
Q ss_pred eeccC--CCCCCCCcceEEEEECCCCeEEEeeCCCCC--CCccccchhhhccCCcEEE-EecCCcceeeecCCchh-hhh
Q psy1482 155 YKKKG--QSKSSWKEDLIVAYECDSKKLLMHQTPQDN--QKKVNIPMENILLYSKLEI-CAHLASTGIMICSPAVP-PLF 228 (627)
Q Consensus 155 ~~~~~--~~~~~~~~~~vv~~d~~~~~vl~~~e~~~~--~~~~~~~~~~~~~~~~~~~-~~~l~~~Giyi~s~~vl-~~~ 228 (627)
+.+.. ++.+++ ++.+| ++++|+.|.++|+. ...+++|..++.+++.... .++++++|+|+|++++| .++
T Consensus 170 ~~~~~~~~~~~~g----~v~~d-~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l 244 (451)
T 1yp2_A 170 ALPMDEKRATAFG----LMKID-EEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLL 244 (451)
T ss_dssp EEEECHHHHTTSE----EEEEC-TTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHH
T ss_pred EEEcChhhcccCC----EEEEC-CCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHH
Confidence 77754 334555 88888 68999999998851 1224456666654432111 34688999999999988 466
Q ss_pred hcCCCCC-c-hhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhccc-CC-CCCCceeecCeEEEC
Q psy1482 229 SDNFDFQ-T-QEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWV-HP-FVPSYKYRRNNIYLA 304 (627)
Q Consensus 229 ~~~fd~~-~-~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~~-~~-~~~~~~~~~~~~~i~ 304 (627)
++.+... . ..++++.++ ..|.++++|..+ + +|.+|+++++|.+++++++.++. .. ++.+...+.+++.++
T Consensus 245 ~~~~~~~~~~~~~~l~~~i----~~g~~v~~~~~~-~-~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~ 318 (451)
T 1yp2_A 245 RDKFPGANDFGSEVIPGAT----SLGMRVQAYLYD-G-YWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYL 318 (451)
T ss_dssp HTTCTTCCCTTTTHHHHHH----HTTCCEEEEECC-S-CCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCC
T ss_pred HhhcccccchHhhHHHHHH----hcCCceEEEEeC-C-EEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccC
Confidence 6542211 1 223333222 236899999987 6 99999999999999999988763 11 111123334455566
Q ss_pred CCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCC-------------------CEeCCCc
Q psy1482 305 EDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDN-------------------VKIEDNC 365 (627)
Q Consensus 305 ~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~-------------------v~Ig~~~ 365 (627)
+++.| +++.| .++.||++|.|+. +.|.+++||++|.||++|+|.++++..+ +.||++|
T Consensus 319 ~~~~i-~~~~I-~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~ 395 (451)
T 1yp2_A 319 PPSKM-LDADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNC 395 (451)
T ss_dssp CCEEE-EEEEE-EEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTC
T ss_pred CCeEE-cceEE-eCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCC
Confidence 66666 56777 4688999999986 8888999999999999999988888888 9999999
Q ss_pred EEeeeeecCCcEECCCcEECCC
Q psy1482 366 EVRLSVLSYNTGVGEHSKLLNG 387 (627)
Q Consensus 366 ~i~~~ii~~~~~Ig~~~~i~~~ 387 (627)
.|.+++||++|+||++++|.++
T Consensus 396 ~i~~~~Ig~~~~IG~~~~i~~~ 417 (451)
T 1yp2_A 396 HIKRAIIDKNARIGDNVKIINK 417 (451)
T ss_dssp EEESEEECTTCEECTTCEECCS
T ss_pred EEeccEeCCCcEECCCCEEeCC
Confidence 9999999999999999999865
No 2
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=1.2e-41 Score=364.49 Aligned_cols=316 Identities=19% Similarity=0.258 Sum_probs=242.7
Q ss_pred eEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 18 LQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
|+|||||+|.|+||+|+ .+||+|+|++|+|||+|+|+.|..+|+++|+|++++. +++|+..... ++.++.
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~-----~i~~~~ 72 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK-----EISIVT 72 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT-----TCEEEE
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC-----cEEEEe
Confidence 78999999999999999 8999999999999999999999999999999999866 7778765311 355666
Q ss_pred CCC-CcchhhhhhcccccCCccCCEEEEeCCeecc--ccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEEE
Q psy1482 96 SDG-CYSFGDVMRDLDGKAVIRNDFILVSGDVVSN--INLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVA 172 (627)
Q Consensus 96 ~~~-~~~~gdalr~l~~~~~i~~dfll~~gD~i~~--~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv~ 172 (627)
++. ..|++++++.. .. .++|++++||+++. .++..+++ .+.+++++.+...+..++ ++.
T Consensus 73 ~~~~~~g~~~~l~~~--~~--~~~~lv~~~D~~~~~~~~~~~l~~----------~~~~~i~~~~~~~~~~~~----~v~ 134 (401)
T 2ggo_A 73 QKDDIKGTGAAILSA--KF--NDEALIIYGDLFFSNEKEICNIIT----------LKENAIIGVKVSNPKDYG----VLV 134 (401)
T ss_dssp CCTTCCBSTTTGGGC--CC--SSEEEEEETTEEESCSHHHHHHTT----------CSSEEEEEEECSCCSSSC----EEE
T ss_pred CCCCCCChHHHHHHh--cc--CCCEEEEeCccccccHHHHHHHHH----------hcCCEEEEEEcCCCccee----EEE
Confidence 665 78999999853 22 56799999999876 56666654 145677777766555565 777
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCC-Cc---hhhhhcccccCh
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDF-QT---QEHFIKGVLINE 248 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~-~~---~~dfi~~il~~~ 248 (627)
++ .++++..+.+++. .| ++++.++|+|+|++++++.++..... .. ..++++.+
T Consensus 135 ~~-~~g~v~~~~ek~~------~~------------~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---- 191 (401)
T 2ggo_A 135 LD-NQNNLSKIIEKPE------IP------------PSNLINAGIYKLNSDIFTYLDKISISERGELELTDAINLM---- 191 (401)
T ss_dssp EC-TTSSEEEEECSCS------SC------------SCSEEEEEEEEEETHHHHHHHHSCCCSSSCBCHHHHHHHH----
T ss_pred EC-CCCeEEEEEECCC------CC------------CCcEEEEEEEEEcHHHHHHhhhcCcCCCCceEHHHHHHHH----
Confidence 77 5789999988763 11 45788999999999999988653211 11 12333211
Q ss_pred hcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhcccCCCC----CCceeecCeEEECCCeEECCCCEEcCCcEECCC
Q psy1482 249 EILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVHPFV----PSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEG 324 (627)
Q Consensus 249 ~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~~~~~~----~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~ 324 (627)
..|.+++++..+ + +|.+|++|++|..+++.++.++.++.. .+.....+++++++++.|++++.|.+++.||++
T Consensus 192 -~~g~~v~~~~~~-~-~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~ 268 (401)
T 2ggo_A 192 -AKDHRVKVIEYE-G-YWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKG 268 (401)
T ss_dssp -HHHSCEEEEECC-S-CEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTT
T ss_pred -HCCCcEEEEEec-c-eEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCC
Confidence 236688988887 6 999999999999999999888764422 123455667778888888888888888888888
Q ss_pred CEECCCceee-eeEECCCCEECCCcEEeceEECCCCEeCCCcEEeeeeecCCcEECCCcEEC
Q psy1482 325 SSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLL 385 (627)
Q Consensus 325 ~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~ 385 (627)
|.|+++|.|+ +++||++|.||++|.|.+++|++++.|++++.|.+++||++|+||+++.|.
T Consensus 269 ~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 269 SEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIA 330 (401)
T ss_dssp CEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEEC
T ss_pred CEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEc
Confidence 8888888886 688888888888888888888888888888888777777777777766665
No 3
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.8e-42 Score=367.10 Aligned_cols=340 Identities=12% Similarity=0.083 Sum_probs=248.0
Q ss_pred ceEEEEEeCCCCCCCCcC--CCCccccccCCe-ehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccC----Ce
Q psy1482 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNK-CLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLV----GT 89 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~-pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~----~~ 89 (627)
.|+|||||+|.|+||+|+ .+||+|+|++|+ |||+|+|+.|..+|+++|+|+++++.+++.+|+... |+.. ..
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~-~~~~~~~~~~ 90 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRG-WDFFRPERNE 90 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH-SCCCCGGGTC
T ss_pred ceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhh-hccccccccC
Confidence 589999999999999999 899999999999 999999999999999999999998889999999763 4310 11
Q ss_pred eEEEEeCC----CC---cchhhhhhcccccCCcc----CCEEEEeCCeeccccHHHHHHHHHHHhcCCCCceEEEEeecc
Q psy1482 90 LITLIVSD----GC---YSFGDVMRDLDGKAVIR----NDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVLYKKK 158 (627)
Q Consensus 90 ~v~~i~~~----~~---~~~gdalr~l~~~~~i~----~dfll~~gD~i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~ 158 (627)
.+.++... .. .|++++++. +...+. ++|++++||++++.++..+++.|++. ++.+|+++.+.
T Consensus 91 ~v~i~~~~~~~~~~~~~~Gt~~al~~--a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~tl~~~~~ 163 (420)
T 3brk_X 91 SFDILPASQRVSETQWYEGTADAVYQ--NIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDS-----GADVTIGCLEV 163 (420)
T ss_dssp EEEEECCC-------CCCCHHHHHHT--THHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHT-----TCSEEEEEEEE
T ss_pred CEEEeCccccccCCccccCCHHHHHH--HHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHc-----CCeEEEEEeec
Confidence 24444311 12 799999984 444443 56999999999999999999999875 46788888765
Q ss_pred --CCCCCCCCcceEEEEECCCCeEEEeeCCCCCCC-ccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCCCC
Q psy1482 159 --GQSKSSWKEDLIVAYECDSKKLLMHQTPQDNQK-KVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNFDF 234 (627)
Q Consensus 159 --~~~~~~~~~~~vv~~d~~~~~vl~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~fd~ 234 (627)
.++.+++ ++.+| ++++|+.|.++|.... ....+ .++++++|+|+|++++| .++.+....
T Consensus 164 ~~~~~~~~g----~v~~d-~~g~v~~~~ekp~~~~~~~~~~------------~~~~~~~Giy~~~~~~l~~~l~~~~~~ 226 (420)
T 3brk_X 164 PRMEATGFG----VMHVN-EKDEIIDFIEKPADPPGIPGNE------------GFALASMGIYVFHTKFLMEAVRRDAAD 226 (420)
T ss_dssp ETTGGGGSE----EEEEC-TTSBEEEEEESCSSCCCBTTBT------------TEEEEEEEEEEEEHHHHHHHHTSSCCC
T ss_pred CccccCccc----EEEEC-CCCcEEEeEeCCCccccccccc------------cceEEeeeeEEEeHHHHHHHHHHhccc
Confidence 2333454 78787 6799999999874111 00000 25688999999999987 466543221
Q ss_pred Cc-hhhhhcccccChhcccCeeEEEEcC----------CCceeeecCChhhHHHHhHHHhhcccCCCCC-CceeecCeEE
Q psy1482 235 QT-QEHFIKGVLINEEILDCRLYCSVVD----------DIEYGISVKDWPSYQIASRDIVQRWVHPFVP-SYKYRRNNIY 302 (627)
Q Consensus 235 ~~-~~dfi~~il~~~~~~g~~I~~~~~~----------~~~~~~~V~s~~~y~~a~~dil~~~~~~~~~-~~~~~~~~~~ 302 (627)
.. ..+|..+++... +...++++|.++ ++ ||.+|+++++|..++++++.++....+. ....+.+...
T Consensus 227 ~~~~~~~~~d~l~~l-i~~g~v~~~~~~~~~~~~~~~~~~-~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~ 304 (420)
T 3brk_X 227 PTSSRDFGKDIIPYI-VEHGKAVAHRFADSCVRSDFEHEP-YWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAE 304 (420)
T ss_dssp ----------CTTHH-HHHSCEEEEEHHHHBCCCTTCSSC-CEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCC
T ss_pred CCccccchHHHHHHH-hhhCcEEEEEeccccccccccCCC-EEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccc
Confidence 11 223434444322 222389999992 47 9999999999999999999887542221 1112233445
Q ss_pred ECCCeEECC-----CCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEeeeeecCCcE
Q psy1482 303 LAEDVLIGK-----TSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTG 377 (627)
Q Consensus 303 i~~~~~i~~-----~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~ii~~~~~ 377 (627)
+++++.|++ ++.+ .++.||++|.| .++.|.+++||++|+||++|.|.+|+|++++.||.+|.|.+|+||++|.
T Consensus 305 i~~~~~i~~~~~~~~~~i-~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~~~ 382 (420)
T 3brk_X 305 ITPPAKFVHDDEDRRGSA-VSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHGVV 382 (420)
T ss_dssp CCCCCEEECBCSSCBCEE-ESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTTCE
T ss_pred cCCCcEEecccccCCcEe-cCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCCCE
Confidence 556666665 5666 48888888888 7888888888888888888888888888888888888888888888888
Q ss_pred ECCCcEEC
Q psy1482 378 VGEHSKLL 385 (627)
Q Consensus 378 Ig~~~~i~ 385 (627)
||++++|.
T Consensus 383 i~~~~~i~ 390 (420)
T 3brk_X 383 IPEGLIVG 390 (420)
T ss_dssp ECTTCEES
T ss_pred ECCCCEEe
Confidence 88877777
No 4
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=1.1e-41 Score=374.44 Aligned_cols=231 Identities=14% Similarity=0.139 Sum_probs=175.5
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHh--cccccCCeeEEE
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKR--KEKSLVGTLITL 93 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~--~~~~~~~~~v~~ 93 (627)
..+.+||||||.||||+| .+||||+||+|+|||+|+|++|..+|+++|+|+++++.+++++|+++ ..|+ .+++|
T Consensus 11 ~~~~vvILAaG~GtRm~~-~~pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~---~~i~~ 86 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRS-DTPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLG---RTIDV 86 (501)
T ss_dssp -CEEEEEEECSCCGGGCC-SSCGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHT---SCCEE
T ss_pred CCceEEEECCcCcccCCC-CCCHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcC---CcEEE
Confidence 357889999999999999 47999999999999999999999999999999999999999999976 2333 77899
Q ss_pred EeCCCCcchhhhhhcccccCCcc----CCEEEEeCCee--ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCc
Q psy1482 94 IVSDGCYSFGDVMRDLDGKAVIR----NDFILVSGDVV--SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKE 167 (627)
Q Consensus 94 i~~~~~~~~gdalr~l~~~~~i~----~dfll~~gD~i--~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~ 167 (627)
+.|+...|||+|++ .++..+. +++++++||.. ....+..+++.|+.. ++.+|++..++..+.+||
T Consensus 87 ~~q~~~lGTa~Av~--~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~-----~~~~ti~~~~~~dp~~yG-- 157 (501)
T 3st8_A 87 ALQDRPLGTGHAVL--CGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAV-----SAAVTVLTTTLDDPFGYG-- 157 (501)
T ss_dssp EECSSCCCHHHHHH--HHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-----TCSEEEEEEECSCCTTSC--
T ss_pred EEcCCCCCcHHHHH--HHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhc-----cccceEeeeccCCchhcc--
Confidence 99999999999998 5566664 35899999974 345688999999987 588999999998888888
Q ss_pred ceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCc--hhhhhcccc
Q psy1482 168 DLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQT--QEHFIKGVL 245 (627)
Q Consensus 168 ~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~--~~dfi~~il 245 (627)
++..| ++|+|+.+.|+++.. |.+ ...+++++|+|+|++++|..+........ .+.++.+++
T Consensus 158 --~i~~~-~~g~v~~ivEk~~~~-----~~~---------~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i 220 (501)
T 3st8_A 158 --RILRT-QDHEVMAIVEQTDAT-----PSQ---------REIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVI 220 (501)
T ss_dssp --EEEEC-TTCCEEEEECGGGCC-----HHH---------HHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHH
T ss_pred --ccccc-cceeEEeeccccCCC-----hhh---------ccceeeeceeeeecchhHHHhhhhhcccccccccchhhHH
Confidence 88888 789999999987511 111 14578999999999998875544322222 233333333
Q ss_pred cChhcccCeeEEEEcCCCceeeecCChhhHH
Q psy1482 246 INEEILDCRLYCSVVDDIEYGISVKDWPSYQ 276 (627)
Q Consensus 246 ~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~ 276 (627)
.-....|..+..+..........+++...+.
T Consensus 221 ~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~ 251 (501)
T 3st8_A 221 AILRSDGQTVHASHVDDSALVAGVNNRVQLA 251 (501)
T ss_dssp HHHHHTTCCEEEEECSSGGGGCCCSSHHHHH
T ss_pred HHHHhcCceEEEEeccchhhhcccccHHHHH
Confidence 2222357788888876431233445544433
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=9.9e-40 Score=356.78 Aligned_cols=314 Identities=15% Similarity=0.153 Sum_probs=217.9
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
+.-+|||||+|.|+||+| .+||+|+|++|+|||+|+|+.|..+|+++|+|++++..+++++++.. .+.++.
T Consensus 10 ~~~~~vIlAaG~g~R~~~-~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~--------~i~~v~ 80 (468)
T 1hm9_A 10 HSNFAIILAAGKGTRMKS-DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG--------QTEFVT 80 (468)
T ss_dssp -CEEEEEECCCCCGGGCC-SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS--------SSEEEE
T ss_pred cCCcEEEEcCCCCccCCC-CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC--------CcEEEe
Confidence 456899999999999987 78999999999999999999999999999999999888888777643 245566
Q ss_pred CCCCcchhhhhhcccccCCcc---CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceE
Q psy1482 96 SDGCYSFGDVMRDLDGKAVIR---NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLI 170 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i~---~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~v 170 (627)
++...|++++++. +...+. ++|++++||. +...++..+++.|++. ++.+|++..+..++..++ +
T Consensus 81 ~~~~~G~~~sl~~--a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~-----~~~~~i~~~~~~~~~~~g----~ 149 (468)
T 1hm9_A 81 QSEQLGTGHAVMM--TEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINH-----KNVATILTAETDNPFGYG----R 149 (468)
T ss_dssp CSSCCCHHHHHHT--THHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-----TCSEEEEEEECSCCTTSC----E
T ss_pred CCccCChHHHHHH--HHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhc-----CCcEEEEEeccCCCCcee----E
Confidence 7777899999884 333443 5699999999 6678999999999875 467788877776666676 7
Q ss_pred EEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCCCCCc-hhhhhcccccCh
Q psy1482 171 VAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNFDFQT-QEHFIKGVLINE 248 (627)
Q Consensus 171 v~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~fd~~~-~~dfi~~il~~~ 248 (627)
+.+| ++++|+.+.+++..... .+ ..+++++|+|+|+++.+ +.+........ .+.++.+++...
T Consensus 150 v~~d-~~g~v~~~~ek~~~~~~--~~------------~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~~l 214 (468)
T 1hm9_A 150 IVRN-DNAEVLRIVEQKDATDF--EK------------QIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIF 214 (468)
T ss_dssp EEEC-TTCCEEEEECTTTCCTT--GG------------GCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHHHH
T ss_pred EEEC-CCCCEEEEEECCCCChH--Hh------------cCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHHHH
Confidence 7777 67899999987631100 00 34678999999999854 55544221100 112222333222
Q ss_pred hcccCeeEEEEcCCCceeee--cCChhhHHHHhHHHhhccc----CC----CCCCceeecCeEEECCCeEECCCCEEcCC
Q psy1482 249 EILDCRLYCSVVDDIEYGIS--VKDWPSYQIASRDIVQRWV----HP----FVPSYKYRRNNIYLAEDVLIGKTSVLKQQ 318 (627)
Q Consensus 249 ~~~g~~I~~~~~~~~~~~~~--V~s~~~y~~a~~dil~~~~----~~----~~~~~~~~~~~~~i~~~~~i~~~~~i~~~ 318 (627)
...|.++++|.++ + +|.+ |+++++|..+...+..++. .+ ..|...++.+.+.+++++.|++++.|+++
T Consensus 215 ~~~g~~v~~~~~~-g-~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~ 292 (468)
T 1hm9_A 215 RETGEKVGAYTLK-D-FDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQ 292 (468)
T ss_dssp HHHTCCEEEEECS-S-GGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEESS
T ss_pred HHCCCEEEEEEcC-C-hHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEECCC
Confidence 2347799999998 6 8866 5699999998876554421 11 12334455666677777777777777777
Q ss_pred cEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEE
Q psy1482 319 VVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEV 367 (627)
Q Consensus 319 ~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i 367 (627)
+.||++|.|+++|.|+++.||++|.|+ +|.|.+++|++++.||.+|.|
T Consensus 293 ~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i 340 (468)
T 1hm9_A 293 TKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYAHI 340 (468)
T ss_dssp CEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSCEE
T ss_pred CEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCceEE
Confidence 777777777777766665555555555 555544444444444444444
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=3.8e-39 Score=351.31 Aligned_cols=315 Identities=15% Similarity=0.185 Sum_probs=223.6
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
.|.|||||+|.|+||+| .+||+|+|++|+|||+|+++.|..+|+++|+|++++..+++++++.. ..+.++.+
T Consensus 8 ~~~aiIlA~G~g~Rl~~-~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~-------~~~~~v~~ 79 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYS-DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD-------PSLNWVLQ 79 (459)
T ss_dssp CEEEEEEECCCCGGGCC-SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC------------CEEEC
T ss_pred cceEEEECCCCCccCCC-CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc-------CCcEEEeC
Confidence 58999999999999998 78999999999999999999999999999999999888899888865 23566667
Q ss_pred CCCcchhhhhhcccccCCcc--CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEEE
Q psy1482 97 DGCYSFGDVMRDLDGKAVIR--NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVA 172 (627)
Q Consensus 97 ~~~~~~gdalr~l~~~~~i~--~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv~ 172 (627)
+...|++++++ .+...+. ++|++++||. +...++..+++.|+. +.++++..+...+.+++ ++.
T Consensus 80 ~~~~g~~~~i~--~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~-------~~~~~~~~~~~~~~~~g----~v~ 146 (459)
T 4fce_A 80 AEQLGTGHAMQ--QAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE-------GGIGLLTVKLDNPSGYG----RIV 146 (459)
T ss_dssp SSCCCHHHHHH--HHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT-------TSEEEEEEECSCCTTSC----EEE
T ss_pred CCCCCcHHHHH--HHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh-------CCEEEEEEecCCCCccc----EEE
Confidence 77788888888 3444454 5799999998 667788999888753 23455555555556666 777
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCCCCCc-hhhhhcccccChhc
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNFDFQT-QEHFIKGVLINEEI 250 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~fd~~~-~~dfi~~il~~~~~ 250 (627)
.| ++++..+.++++.... .+ ..+++++|+|+|+++.+ +++........ .+.++.+.+.....
T Consensus 147 ~~--~g~v~~~~ek~~~~~~--~~------------~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~ 210 (459)
T 4fce_A 147 RE--NGDVVGIVEHKDASDA--QR------------EINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHA 210 (459)
T ss_dssp EE--TTEEEEEECGGGCCTT--GG------------GCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHHHHHH
T ss_pred eC--CCcEEEEEECCCCChH--Hh------------hccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHHHHHH
Confidence 76 7899999887531100 00 34678999999999976 44443211111 12223333322223
Q ss_pred ccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhcccC--------CCCCCceeecCeEEECCCeEECCCCEEcCCcEEC
Q psy1482 251 LDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWVH--------PFVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIG 322 (627)
Q Consensus 251 ~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~~~--------~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig 322 (627)
.|.+++++..++...+.+|+++++|..+...+..++.. -..|...+..+++.+++++.|+++|.|.+++.||
T Consensus 211 ~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~~i~~~~~ig 290 (459)
T 4fce_A 211 DGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILG 290 (459)
T ss_dssp TTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECTTEEEEEEEEEC
T ss_pred CCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECCCeeeccceEEC
Confidence 57889999987311346799999999887654433211 1124455667777888888888888887778888
Q ss_pred CCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEe
Q psy1482 323 EGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVR 368 (627)
Q Consensus 323 ~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~ 368 (627)
++|.|+++|.|++++||++|.|+++|+|.+++|++++.||++|+|.
T Consensus 291 ~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~ 336 (459)
T 4fce_A 291 DRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLR 336 (459)
T ss_dssp TTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEEC
T ss_pred CCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEEC
Confidence 8888888888877777777777777777766676666666666654
No 7
>3jui_A Translation initiation factor EIF-2B subunit EPSI; heat repeat, guanine nucleotide exchange factor, disease mutation, leukodystrophy; 2.00A {Homo sapiens} SCOP: a.118.1.0
Probab=100.00 E-value=1.8e-39 Score=303.83 Aligned_cols=165 Identities=36% Similarity=0.662 Sum_probs=147.2
Q ss_pred CchhhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc-CC--CCCchhHHHHHHHHHhh
Q psy1482 463 DDTSLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN-KP--DMDMKSFHTHMMSKINY 539 (627)
Q Consensus 463 dd~~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~-~~--~~~~~~~~~~~~~~~~~ 539 (627)
||.+.|++|++++|+|+++++++++++++|||++|||||+|.++|+++|++|+|+.+. .. ...+.++.++++++|++
T Consensus 9 ~~~~~F~~Ev~~sl~ra~~e~~~~d~~~LEinslr~a~N~s~~eV~~av~~ail~~~~~~~~~~~~~~~~~~a~~~~i~~ 88 (182)
T 3jui_A 9 DDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVMQVLSHVVLEFPLQQMDSPLDSSRYCALLLPLLKA 88 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHGGGGGCCSSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhcccccChhhHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999975 22 23467788999999999
Q ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhhcCC------chhHHhhhHHHH
Q psy1482 540 FLPLFKNYIKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE------PSSLRKSVEPFV 613 (627)
Q Consensus 540 ~~~ll~~~~~~~~~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~------~~~~~~~~~~fi 613 (627)
|+|+|.+|+++.+.|+++|.++|.+|.+++.+.+.|++||+.|||.|||+||+|++||++.+ .+++|++++|||
T Consensus 89 ~~~ll~~~~~~~~~q~~lL~ale~~~~~~~~~~~~~~~il~~LYd~DileEe~Il~W~~~~~~~~~~~~~~vr~~~~~Fi 168 (182)
T 3jui_A 89 WSPVFRNYIKRAADHLEALAAIEDFFLEHEALGISMAKVLMAFYQLEILAGETILSWFSQRDTTDKGQQLRKNQQLQRFI 168 (182)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHHHHHHHCGGGGGGHHHHHHHHHHTTSSCHHHHHHHHTCCC--CHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhhcchhchHHHHHHHHcCCccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999998888889999999999999999999999998765 226889999999
Q ss_pred HHhccccCCCCCCC
Q psy1482 614 KWLLEADEESEEDD 627 (627)
Q Consensus 614 ~WL~eaeee~~ee~ 627 (627)
+||+||||||||||
T Consensus 169 ~WL~eAEEEs~ee~ 182 (182)
T 3jui_A 169 QWLKEAEEESSEDD 182 (182)
T ss_dssp HHHHHHHC------
T ss_pred HHHhccCcccCCCC
Confidence 99999999998886
No 8
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4.7e-38 Score=342.40 Aligned_cols=315 Identities=14% Similarity=0.203 Sum_probs=228.9
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
.|.|||||+|.|+||++ .+||+|+|++|+|||+|+|+.|..+|+++|+|++++..+++++++... .+.++.+
T Consensus 5 ~~~aiIlA~G~g~Rl~~-~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~-------~~~~v~~ 76 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYS-DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE-------QVNWVLQ 76 (456)
T ss_dssp CEEEEEECCCCCGGGCS-SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC-------CCEEEEC
T ss_pred cceEEEECCCCCcccCC-CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC-------CcEEEeC
Confidence 47899999999999987 689999999999999999999999999999999998888888887652 2556667
Q ss_pred CCCcchhhhhhcccccCCc--cCCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEEE
Q psy1482 97 DGCYSFGDVMRDLDGKAVI--RNDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVA 172 (627)
Q Consensus 97 ~~~~~~gdalr~l~~~~~i--~~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv~ 172 (627)
+...|++++++. +...+ .++|++++||. +...++..+++.|++ +.++++..+...+..++ ++.
T Consensus 77 ~~~~g~~~~~~~--~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~-------~~~~~~~~~~~~~~~~g----~v~ 143 (456)
T 2v0h_A 77 TEQLGTAHAVQQ--AAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE-------NGIALLTVNLDNPTGYG----RII 143 (456)
T ss_dssp SCCCCHHHHHHH--HGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT-------TSEEEEEEECSSCTTSC----EEE
T ss_pred CCCCCcHHHHHH--HHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc-------CCEEEEEeecCCCCccc----eEE
Confidence 777889998884 44445 35699999999 567788999887754 34566666655555565 666
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCCCCCc-hhhhhcccccChhc
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNFDFQT-QEHFIKGVLINEEI 250 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~fd~~~-~~dfi~~il~~~~~ 250 (627)
.| ++++..+.++++. .... ...++.++|+|+|+++.+ +.++....... .+.++.+++.....
T Consensus 144 ~~--~g~v~~~~ek~~~------~~~~--------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~ 207 (456)
T 2v0h_A 144 RE--NGNVVAIVEQKDA------NAEQ--------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQ 207 (456)
T ss_dssp EE--TTEEEEEECTTTC------CHHH--------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHHHHHH
T ss_pred Ec--CCcEEEEEECCCC------ChhH--------hcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHHHHHH
Confidence 66 7899999887631 0000 023578999999999854 45543211111 11122233222223
Q ss_pred ccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhcc----cCC----CCCCceeecCeEEECCCeEECCCCEEcCCcEEC
Q psy1482 251 LDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRW----VHP----FVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIG 322 (627)
Q Consensus 251 ~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~----~~~----~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig 322 (627)
.|.+++++..++...|.+|+++++|..+.+.+..+. ..+ ..|...++.+++.+++++.|++++.|++++.||
T Consensus 208 ~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig 287 (456)
T 2v0h_A 208 DNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLG 287 (456)
T ss_dssp TTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEEEEEEEC
T ss_pred cCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEcCCcEEC
Confidence 477899999863224679999999999887554332 111 123355677788889999999999998888999
Q ss_pred CCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEe
Q psy1482 323 EGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVR 368 (627)
Q Consensus 323 ~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~ 368 (627)
++|.|+++|.|.+++||++|.|+++|+|.+++|++++.||.++.|.
T Consensus 288 ~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~ 333 (456)
T 2v0h_A 288 DRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLR 333 (456)
T ss_dssp TTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEEC
T ss_pred CCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEEC
Confidence 9999999998888888888888888888777777777776666654
No 9
>1paq_A Translation initiation factor EIF-2B epsilon subunit; heat repeat, AA motif; 2.30A {Saccharomyces cerevisiae} SCOP: a.118.1.14
Probab=100.00 E-value=8.7e-37 Score=288.00 Aligned_cols=162 Identities=26% Similarity=0.348 Sum_probs=140.5
Q ss_pred hhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc-CCCCCchhHHHHHHHHHhhHHHHH
Q psy1482 466 SLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN-KPDMDMKSFHTHMMSKINYFLPLF 544 (627)
Q Consensus 466 ~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~-~~~~~~~~~~~~~~~~~~~~~~ll 544 (627)
..|++|++++|+|+++++++++++++|||++|++||++.++|+++++.|+|+.+. .......+..++++++|++|+|+|
T Consensus 20 ~~F~~Ev~~sL~r~~~e~~~~d~iilEin~lr~a~n~s~~ev~~~v~~a~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ll 99 (189)
T 1paq_A 20 EDFEKEGIATVERAMENNHDLDTALLELNTLRMSMNVTYHEVRIATITALLRRVYHFIATQTLGPKDAVVKVFNQWGLLF 99 (189)
T ss_dssp -CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999874 211123346789999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHHHh--hccchHHHHHHHHHHHhhcCCCChhhHhhhhhcCC----chhHHhhhHHHHHHhcc
Q psy1482 545 KNYIKNESAQQDCLDAFEEFAE--ENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE----PSSLRKSVEPFVKWLLE 618 (627)
Q Consensus 545 ~~~~~~~~~q~~~l~ale~~~~--~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~----~~~~~~~~~~fi~WL~e 618 (627)
.+|+++.+.|+++|.+||.||. +++.+.+.|++||+.|||.|||+||+|++||++.+ .++++++++|||+||+|
T Consensus 100 ~~~~~~~~~q~~lL~ale~~~~~~~~~~~~~~~~~il~~LYd~DileEe~il~W~~~~~~~~~~~~v~~~~~~Fi~WL~e 179 (189)
T 1paq_A 100 KRQAFDEEEYIDLMNIIMEKIVEQSFDKPDLILFSALVSLYDNDIIEEDVIYKWWDNVSTDPRYDEVKKLTVKWVEWLQN 179 (189)
T ss_dssp GGTCCSHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSSCHHHHHHHHHTCCCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHhccccccccHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999 78888899999999999999999999999998754 23779999999999999
Q ss_pred ccCCCCCCC
Q psy1482 619 ADEESEEDD 627 (627)
Q Consensus 619 aeee~~ee~ 627 (627)
|||||||||
T Consensus 180 AEeEs~~ee 188 (189)
T 1paq_A 180 ADEESSSEE 188 (189)
T ss_dssp TC-------
T ss_pred cCccccccC
Confidence 999887664
No 10
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.96 E-value=2.3e-29 Score=255.81 Aligned_cols=238 Identities=15% Similarity=0.199 Sum_probs=182.4
Q ss_pred ceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhccc-cc-------
Q psy1482 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEK-SL------- 86 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~-~~------- 86 (627)
.|+|||||||.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++++|+....+ ..
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~ 81 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNK 81 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CCH
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcccc
Confidence 479999999999999999 99999999999999999999999999999999999999999999875311 00
Q ss_pred -----------CCeeEEEEeCCCCcchhhhhhcccccCCcc-CCEEEEeCCeecccc-----HHHHHHHHHHHhcCCCCc
Q psy1482 87 -----------VGTLITLIVSDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVVSNIN-----LLSALKSFKKINSMDSGA 149 (627)
Q Consensus 87 -----------~~~~v~~i~~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i~~~~-----l~~~l~~h~~~~~~~~~~ 149 (627)
.+.++.++.++...|++++++ .+...+. ++|+|++||++++.+ +..+++.|++. ++
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~--~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~-----~~ 154 (281)
T 3juk_A 82 ENALKSIRNIIEKCCFSYVRQKQMKGLGHAIL--TGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKY-----QC 154 (281)
T ss_dssp HHHHHHHHHHHHHCEEEEEECSSCCCHHHHHH--HTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH-----CS
T ss_pred hhhhhhhhccccCccEEEEecCCCCCcHHHHH--HHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHc-----CC
Confidence 125777888888899999998 4455564 689999999999998 99999999876 34
Q ss_pred eEEEEeecc--CCCCCCCCcceEEEEECC--CC--eEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCc
Q psy1482 150 VALVLYKKK--GQSKSSWKEDLIVAYECD--SK--KLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPA 223 (627)
Q Consensus 150 ~~T~~~~~~--~~~~~~~~~~~vv~~d~~--~~--~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~ 223 (627)
.|+++..+ .++.+|+ ++.+| + +| +|..+.|+|... .+ .++++++|+|+|+++
T Consensus 155 -~~v~~~~~~~~~~~~~g----~v~~~-~~~~g~~~v~~~~Ekp~~~----~~------------~~~~~~~GiYi~~~~ 212 (281)
T 3juk_A 155 -SIVAIEEVALEEVSKYG----VIRGE-WLEEGVYEIKDMVEKPNQE----DA------------PSNLAVIGRYILTPD 212 (281)
T ss_dssp -CEEEEEECCTTTGGGSE----EEEEE-EEETTEEEEEEEEESCCTT----TC------------SCSEEEEEEEEECTT
T ss_pred -CEEEEEEechhhcccCC----EEEec-cCCCCceEEeEEEECcCCC----CC------------CcceeEEEEEEECHH
Confidence 55666554 3444555 78777 4 57 999999987411 01 346788999999999
Q ss_pred hhhhhhcCCCCCchhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhcc
Q psy1482 224 VPPLFSDNFDFQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRW 286 (627)
Q Consensus 224 vl~~~~~~fd~~~~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~ 286 (627)
+|..+.........+-.+.+++... +...+|++|.++ + +|.+|++|++|..+++.++..-
T Consensus 213 ~l~~l~~~~~~~~~e~~l~d~i~~l-~~~~~v~~~~~~-g-~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 213 IFEILSETKPGKNNEIQITDALRTQ-AKRKRIIAYQFK-G-KRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp HHHHHHTCCCCGGGSCCHHHHHHHH-HHHSCCEEEECC-S-EEEETTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCceeHHHHHHHH-HhcCCEEEEEeC-C-eEEcCCCHHHHHHHHHHHHhch
Confidence 9998876311110111123333221 233489999998 7 9999999999999999887653
No 11
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.95 E-value=9.2e-28 Score=242.26 Aligned_cols=233 Identities=13% Similarity=0.161 Sum_probs=182.4
Q ss_pred CCceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecC-ChHHHHHHHHhc-ccccCCee
Q psy1482 15 DEVLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTS-HVNQIRELVKRK-EKSLVGTL 90 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~-~~~~i~~~l~~~-~~~~~~~~ 90 (627)
+..|+|||||+|.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++ +.+.+.+++... .|+ ++
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~~~~~---~~ 98 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQEFG---VS 98 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGT---CE
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhccccC---ce
Confidence 46799999999999999999 899999999999999999999999999999999996 568888998752 344 67
Q ss_pred EEEEeCCCCcchhhhhhcccccCCc-cCCEEEEeCCeeccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcce
Q psy1482 91 ITLIVSDGCYSFGDVMRDLDGKAVI-RNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDL 169 (627)
Q Consensus 91 v~~i~~~~~~~~gdalr~l~~~~~i-~~dfll~~gD~i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~ 169 (627)
+.++.++...|++++++. +...+ .++|++++||++++.++..+++.|++. ++.+|+++.+..++.+++
T Consensus 99 i~~~~~~~~~G~~~al~~--a~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~~~~~~g---- 167 (269)
T 4ecm_A 99 FTYRVQDKAGGIAQALGL--CEDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQ-----KEGAKVLLQSVDDPERFG---- 167 (269)
T ss_dssp EEEEECSSCCCHHHHHHT--THHHHTTSEEEEEETTEEESSCSHHHHHHHHTS-----SSSEEEEEEECSCGGGSE----
T ss_pred EEEeeCCccCcHHHHHHH--HHHhcCCCcEEEEeCCccCccCHHHHHHHHHhc-----CCCeEEEEEECCCCCCce----
Confidence 888878888999999984 44445 467999999999999999999999865 467888888877666665
Q ss_pred EEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhh-hcccccCh
Q psy1482 170 IVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHF-IKGVLINE 248 (627)
Q Consensus 170 vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~df-i~~il~~~ 248 (627)
++..| +|+|+.+.++|. .| .++++++|+|+|++++|..+...... .+.+| +..++...
T Consensus 168 ~v~~d--~g~v~~~~ekp~------~~------------~~~~~~~Giy~~~~~~l~~l~~~~~~-~~ge~~l~d~l~~l 226 (269)
T 4ecm_A 168 VANIQ--NRKIIEIEEKPK------EP------------KSSYAVTGIYLYDSKVFSYIKELKPS-ARGELEITDINNWY 226 (269)
T ss_dssp EEEEE--TTEEEEEEESCS------SC------------SCSEEEEEEEEECTTHHHHHTSCCBC-TTSCBCHHHHHHHH
T ss_pred EEEEc--CCEEEEEEECCC------CC------------CCcEEEEEEEEECHHHHHhhhhcCCC-CCCeeeHHHHHHHH
Confidence 78887 489999998763 11 34678999999999999877653211 11111 22222221
Q ss_pred hcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 249 EILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 249 ~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
+...+++++..+ + +|.+|+++++|..+++.+++.
T Consensus 227 -~~~g~v~~~~~~-~-~~~dIgt~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 227 -LKRGVLTYNEMS-G-WWTDAGTHVSLQRANALARDI 260 (269)
T ss_dssp -HHTTCEEEEECC-S-CEEECSSHHHHHHHHHHTTTC
T ss_pred -HHcCCEEEEEeC-C-EEEeCCCHHHHHHHHHHHHhc
Confidence 223478888887 6 999999999999999877654
No 12
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.95 E-value=2.4e-27 Score=243.05 Aligned_cols=254 Identities=10% Similarity=0.034 Sum_probs=185.8
Q ss_pred ceEEEEEeCCCCCCCCcCCCCcccccc--CCeehHHHHHHHHHhCCCcEEEEEecCC-hHHHHHHHHhc-ccccCCeeEE
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPL--VNKCLLEYTLEHLHLSGIEEIIVFCTSH-VNQIRELVKRK-EKSLVGTLIT 92 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi--~g~pli~~~l~~L~~~gi~~i~vv~~~~-~~~i~~~l~~~-~~~~~~~~v~ 92 (627)
.|+|||||||.|+||+| ||+|+|| +|+|||+|+|+.+..+|+++|+|++++. .+++++|+.+. .|. .++.
T Consensus 5 ~~~~vIlAaG~g~R~~~---~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~---~~i~ 78 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS---LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEGR---IPVE 78 (303)
T ss_dssp CCEEEEECTTCBCTTSS---BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTTT---SCEE
T ss_pred ceEEEEECCCCcccCCC---CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhccC---CcEE
Confidence 36899999999999998 7999999 6999999999999999999999999987 58999999763 333 6688
Q ss_pred EEeCC---------------CCcchhhhhhcccccCCccCCEEEEeCCeecccc-HHHHHHHHHHHhcCCCCceEEEEee
Q psy1482 93 LIVSD---------------GCYSFGDVMRDLDGKAVIRNDFILVSGDVVSNIN-LLSALKSFKKINSMDSGAVALVLYK 156 (627)
Q Consensus 93 ~i~~~---------------~~~~~gdalr~l~~~~~i~~dfll~~gD~i~~~~-l~~~l~~h~~~~~~~~~~~~T~~~~ 156 (627)
++.++ ...|+|+|++ .+++.++++|+|++||++++.+ +..++++|+++. ..++.+|++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~--~a~~~i~~~~lV~~gD~l~~~~~~~~l~~~~~~~~--~~~~~~~v~~~ 154 (303)
T 3pnn_A 79 LVFQELDRLPEGFSCPEGREKPWGTNHAVL--MGRDAIREPFAVINADDFYGRNGFEVLARKLMTLE--GKQGEYCMVGY 154 (303)
T ss_dssp EEECCTTCCCTTCCCCTTCCSCCCHHHHHH--TTTTTCCSCEEEEESSCBCCHHHHHHHHHHHHTTT--TCSSEEEEEEE
T ss_pred EEecccccccccccccccccccCCcHHHHH--HHHHhcCCCEEEEECCeecCHHHHHHHHHHHHHhc--cccCceEEEEE
Confidence 88776 5789999998 6677788899999999999886 999999997631 12577888887
Q ss_pred ccCCC-CCCC-CcceEEEEECCCCeEEEeeCCCCCC---CccccchhhhccCCc-E-EEEecCCcceeeecCCchhhhhh
Q psy1482 157 KKGQS-KSSW-KEDLIVAYECDSKKLLMHQTPQDNQ---KKVNIPMENILLYSK-L-EICAHLASTGIMICSPAVPPLFS 229 (627)
Q Consensus 157 ~~~~~-~~~~-~~~~vv~~d~~~~~vl~~~e~~~~~---~~~~~~~~~~~~~~~-~-~~~~~l~~~Giyi~s~~vl~~~~ 229 (627)
+...+ .+++ ...+++.+| ++|+|+.+.|+|+.. ..+..+.. .+. . ...++++++|+|+|+|++|..+.
T Consensus 155 ~~~~~~~~~g~~~~G~v~~d-~~g~v~~i~Ekp~~~~~~~~~~~~~~----~g~~~~~~~~~~i~~GiY~f~~~~~~~l~ 229 (303)
T 3pnn_A 155 RVGNTLSESGGVSRGVCQVD-EKHLLTGVVERTGIERTDGTISFRDE----TGKICTLAEDAPVSMNMWGFTPDYFDYSE 229 (303)
T ss_dssp EGGGSCBTTBCEEEEEEEEC-TTSBEEEEEEEEEEEEETTEEEEECT----TSCEEEECTTCEEEEEEEEECTHHHHHHH
T ss_pred ECCCccCccCceeeeeEeeC-CCCcEEEEEECCCCcccccccccccc----ccccccCCCCCEEEEEEEEECHHHHHHHH
Confidence 76554 5553 233577787 679999999987410 00000000 000 0 01357899999999999998776
Q ss_pred cC--------CCCCchhhhhcccccChhcccC-eeEEEEcCCCceeeecCChhhHHHHhHHHhhccc
Q psy1482 230 DN--------FDFQTQEHFIKGVLINEEILDC-RLYCSVVDDIEYGISVKDWPSYQIASRDIVQRWV 287 (627)
Q Consensus 230 ~~--------fd~~~~~dfi~~il~~~~~~g~-~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~~ 287 (627)
.. ......+-++++++......|. +|++|..+ + +|.+|+++++|..+++.+.+.+.
T Consensus 230 ~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~-g-~w~dIgt~~dl~~a~~~l~~~~~ 294 (303)
T 3pnn_A 230 ELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTT-A-RWFGVTYSDDRPGVVAKLRELTE 294 (303)
T ss_dssp HHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECS-C-CCBCCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeC-C-ceECCCCHHHHHHHHHHHHHHHH
Confidence 41 0101112223334332222465 89999998 6 99999999999999887665543
No 13
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.95 E-value=2e-26 Score=231.19 Aligned_cols=224 Identities=13% Similarity=0.149 Sum_probs=167.0
Q ss_pred eEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCe------
Q psy1482 18 LQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGT------ 89 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~------ 89 (627)
|+|||||||.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++++|+.+..+...++
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAE 82 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEGGG
T ss_pred cEEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccccc
Confidence 78999999999999999 8999999999999999999999999999999999988899999997531100011
Q ss_pred -------------eEEEEeCCCCcchhhhhhcccccCCc--cCCEEEEeCCeeccccHHHHHHHHHHHhcCCCCceEEEE
Q psy1482 90 -------------LITLIVSDGCYSFGDVMRDLDGKAVI--RNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVL 154 (627)
Q Consensus 90 -------------~v~~i~~~~~~~~gdalr~l~~~~~i--~~dfll~~gD~i~~~~l~~~l~~h~~~~~~~~~~~~T~~ 154 (627)
.+.+..+....|++++++ .+...+ .++|++++||++++.++..+++.|++. ++.+|+.
T Consensus 83 ~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~--~a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~-----~~~~t~~ 155 (259)
T 1tzf_A 83 NRMEVHHKRVEPWNVTLVDTGDSSMTGGRLK--RVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAH-----GKKATLT 155 (259)
T ss_dssp TEEEETTCCCCCCEEEEEECCSSCCHHHHHH--HTGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHH-----CCSEEEE
T ss_pred cceeeeeccccccceeeeecccccCcHHHHH--HHHHhcCCCCcEEEEECCEecccCHHHHHHHHHHh-----CCeEEEE
Confidence 123344556789999998 445555 467999999999999999999999876 4567765
Q ss_pred eeccCCCCCCCCcceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcC-CC
Q psy1482 155 YKKKGQSKSSWKEDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDN-FD 233 (627)
Q Consensus 155 ~~~~~~~~~~~~~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~-fd 233 (627)
..+ ++.+++ ++.+| +|+|..+.++|.. ..+++++|+|+|+++++..+... +.
T Consensus 156 ~~~--~~~~~g----~v~~~--~g~v~~~~ekp~~-------------------~~~~~~~Giy~~~~~~l~~l~~~~~~ 208 (259)
T 1tzf_A 156 ATF--PPGRFG----ALDIQ--AGQVRSFQEKPKG-------------------DGAMINGGFFVLNPSVIDLIDNDATT 208 (259)
T ss_dssp EEC--CCCCSE----EEEEE--TTEEEEEEESCSC-------------------CSCCEECCCEEECGGGGGGCCSTTCC
T ss_pred Eec--CCCCcc----EEEEc--CCEEEEEEecCCC-------------------CCceEEEEEEEeCHHHHHhhcccccc
Confidence 443 345565 77787 7899999997730 13578999999999999877542 11
Q ss_pred CCchhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhh
Q psy1482 234 FQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQ 284 (627)
Q Consensus 234 ~~~~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~ 284 (627)
+ ..+.+..++ ...+++++..+ + +|.+|+++++|..+++.+..
T Consensus 209 ~--~~~~i~~~~-----~~~~v~~~~~~-~-~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 209 W--EQEPLMTLA-----QQGELMAFEHP-G-FWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp T--TTHHHHHHH-----HTTCEEEEEEC-S-CEEECCSHHHHHHHHHHHHT
T ss_pred c--HHHHHHHHH-----HcCCEEEEEeC-c-EEEeCCCHHHHHHHHHHHhc
Confidence 1 123333322 23479999998 6 99999999999999987765
No 14
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.94 E-value=1.2e-26 Score=238.27 Aligned_cols=237 Identities=17% Similarity=0.186 Sum_probs=177.5
Q ss_pred ceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccc---------
Q psy1482 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKS--------- 85 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~--------- 85 (627)
.|+|||||||.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++++|+... |.
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~-~~l~~~l~~~~ 86 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTS-FELEAMLEKRV 86 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCC-HHHHHHHC---
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcc-hhhhhhhhhcc
Confidence 689999999999999999 889999999999999999999999999999999998889999998641 10
Q ss_pred ------------cCCeeEEEEeCCCCcchhhhhhcccccCCcc-CCEEEEeCCeeccc--------cHHHHHHHHHHHhc
Q psy1482 86 ------------LVGTLITLIVSDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVVSNI--------NLLSALKSFKKINS 144 (627)
Q Consensus 86 ------------~~~~~v~~i~~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i~~~--------~l~~~l~~h~~~~~ 144 (627)
..+.++.++.++...|++++++ .+...+. ++|+|++||++++. ++..+++.|++.
T Consensus 87 ~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~--~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~-- 162 (302)
T 2e3d_A 87 KRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVL--CAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET-- 162 (302)
T ss_dssp -CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHH--HTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH--
T ss_pred chhhhhhhhhccccCcceEEeeCCccCCHHHHHH--HHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc--
Confidence 0135777888888899999998 4445553 68999999999873 799999999876
Q ss_pred CCCCceEEEEeeccCCCCCCCCcceEEEEEC---CCC---eEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceee
Q psy1482 145 MDSGAVALVLYKKKGQSKSSWKEDLIVAYEC---DSK---KLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIM 218 (627)
Q Consensus 145 ~~~~~~~T~~~~~~~~~~~~~~~~~vv~~d~---~~~---~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy 218 (627)
++ +|+++.+..++.+|+ ++.++. ++| +|..+.++|... .+ .++++++|+|
T Consensus 163 ---~~-~~i~~~~~~~~~~yg----~v~~~~~~~~~g~~~~v~~~~ekp~~~----~~------------~~~~~~~Giy 218 (302)
T 2e3d_A 163 ---GH-SQIMVEPVADVTAYG----VVDCKGVELAPGESVPMVGVVEKPKAD----VA------------PSNLAIVGRY 218 (302)
T ss_dssp ---CC-EEEEEEECSCGGGSE----EEECTTCCCCTTCEEEECEEEESCCTT----TC------------SCSEEEEEEE
T ss_pred ---CC-cEEEEEEccCCCCcc----EEEecccccCCCCceeEEEEEECCCCC----cc------------ccceEEEEEE
Confidence 34 677777766555665 665420 246 888998887310 01 2457889999
Q ss_pred ecCCchhhhhhcCCCCCchhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 219 ICSPAVPPLFSDNFDFQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 219 i~s~~vl~~~~~~fd~~~~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
+|+++++..+.....-...+-++..++... +...+++++.++ + +|.+|++|++|..++.+++.+
T Consensus 219 i~~~~~l~~l~~~~~~~~~~~~l~d~i~~l-~~~~~v~~~~~~-~-~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 219 VLSADIWPLLAKTPPGAGDEIQLTDAIDML-IEKETVEAYHMK-G-KSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp EECTTHHHHHTCCCC----CCCHHHHHHHH-HHHSCEEEEECC-S-CEEECSSHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHhhCCCCCCceehHHHHHHH-HHhCCEEEEEeC-C-eEEcCCCHHHHHHHHHHHHhc
Confidence 999999988865321100111112222211 222389999998 6 999999999999999776543
No 15
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.94 E-value=1.7e-26 Score=236.55 Aligned_cols=239 Identities=15% Similarity=0.179 Sum_probs=164.1
Q ss_pred CCceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccc-------
Q psy1482 15 DEVLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKS------- 85 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~------- 85 (627)
...|+|||||||.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++++|+... |.
T Consensus 12 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~-~~l~~~l~~ 90 (297)
T 2ux8_A 12 KPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIA-YELEATMAA 90 (297)
T ss_dssp CCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCC-HHHHHHHHT
T ss_pred cCccEEEEECCCCccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhh-hhhhhhhhh
Confidence 35689999999999999999 889999999999999999999999999999999998889999998642 10
Q ss_pred ------------cCCeeEEEEeCCCCcchhhhhhcccccCCc-cCCEEEEeCCeecc---ccHHHHHHHHHHHhcCCCCc
Q psy1482 86 ------------LVGTLITLIVSDGCYSFGDVMRDLDGKAVI-RNDFILVSGDVVSN---INLLSALKSFKKINSMDSGA 149 (627)
Q Consensus 86 ------------~~~~~v~~i~~~~~~~~gdalr~l~~~~~i-~~dfll~~gD~i~~---~~l~~~l~~h~~~~~~~~~~ 149 (627)
..+.++.++.++...|++++++ .+...+ .++|+|++||++++ .++..+++.|++. ++
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~--~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~-----~~ 163 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVW--CARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV-----GG 163 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHH--TTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHH-----CS
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHH--HHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhc-----CC
Confidence 0125677887888899999998 444445 36899999999987 6799999999876 33
Q ss_pred eEEEEeecc--CCCCCCCCcceEEEEEC-CCC--eEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCch
Q psy1482 150 VALVLYKKK--GQSKSSWKEDLIVAYEC-DSK--KLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAV 224 (627)
Q Consensus 150 ~~T~~~~~~--~~~~~~~~~~~vv~~d~-~~~--~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~v 224 (627)
.|+++.+. .++.+|+ ++.+++ +++ +|..+.++|.. . ...++++++|+|+|++++
T Consensus 164 -~~i~~~~~~~~~~~~yg----~v~~~~~~~~~~~v~~~~ekp~~----~------------~~~~~~~~~Giyi~~~~~ 222 (297)
T 2ux8_A 164 -NLICAEEVPDDQTHRYG----IITPGTQDGVLTEVKGLVEKPAP----G------------TAPSNLSVIGRYILQPEV 222 (297)
T ss_dssp -EEEEEC---------------CCCCCCBCSSEEEC------------------------------CCCEEEEEEECTHH
T ss_pred -CEEEEEecCcccCCCCC----eEEecccCCCceeEEEEEECCCC----C------------CCCccEEEEEEEEECHHH
Confidence 46666554 3344555 554441 244 88888887631 0 114578899999999999
Q ss_pred hhhhhcCCCCCchhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 225 PPLFSDNFDFQTQEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 225 l~~~~~~fd~~~~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
+..+.....-....-.+..++... +...+|+++.++ + +|.+|++|++|..++.+++.+
T Consensus 223 l~~l~~~~~~~~~~~~l~d~i~~l-~~~~~v~~~~~~-~-~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 223 MRILENQGKGAGGEIQLTDAMQRM-IGDQPFHGVTFQ-G-TRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp HHHHHHTC--------CCTTGGGG-TTTSCEEEEECS-S-EEEETTSHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCCeeEHHHHHHHH-HhcCCEEEEEec-c-eEEeCCCHHHHHHHHHHHHhc
Confidence 988765321100011122223221 223489999998 6 999999999999999877654
No 16
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.94 E-value=1.1e-25 Score=229.28 Aligned_cols=229 Identities=15% Similarity=0.197 Sum_probs=175.5
Q ss_pred CceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEec-CChHHHHHHHHhc-ccccCCeeE
Q psy1482 16 EVLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCT-SHVNQIRELVKRK-EKSLVGTLI 91 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~-~~~~~i~~~l~~~-~~~~~~~~v 91 (627)
..|+|||||+|.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|+++ ++.+++++++++. +|+ +++
T Consensus 2 ~~m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g~~~g---~~i 78 (295)
T 1lvw_A 2 AHMKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQFG---VRF 78 (295)
T ss_dssp CSCEEEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGT---SEE
T ss_pred CceEEEEECCCCCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhccccC---ceE
Confidence 4699999999999999999 88999999999999999999999999999999986 6789999999763 354 678
Q ss_pred EEEeCCCCcchhhhhhcccccCCcc-CCEEEEeCCeec-cccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcce
Q psy1482 92 TLIVSDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVVS-NINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDL 169 (627)
Q Consensus 92 ~~i~~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i~-~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~ 169 (627)
.++.++...|++++++ .+...+. ++++++.||.++ +.++..+++.|.+. .+.+|++..++..+.+++
T Consensus 79 ~~~~~~~~~G~~~al~--~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~-----~~~~~v~~~~v~dp~~~g---- 147 (295)
T 1lvw_A 79 SYRVQEEPRGIADAFI--VGKDFIGDSKVALVLGDNVFYGHRFSEILRRAASL-----EDGAVIFGYYVRDPRPFG---- 147 (295)
T ss_dssp EEEECSSCCCGGGHHH--HTHHHHTTSCEEEEETTCCEECTTHHHHHHHHHTC-----CSSEEEEEEECSCCTTSE----
T ss_pred EEeeCCCCCChHHHHH--HHHHHhCCCcEEEEECCccccCcCHHHHHHHHHHc-----CCCcEEEEEECCCcccCC----
Confidence 8888888889999987 3444554 679999999864 67999999998754 244566666666666676
Q ss_pred EEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCC----chhhhhcccc
Q psy1482 170 IVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ----TQEHFIKGVL 245 (627)
Q Consensus 170 vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~----~~~dfi~~il 245 (627)
++.+| ++++|+.+.++|. .| +++++++|+|+|+++++..+..-.... ...|.+...
T Consensus 148 ~v~~d-~~g~v~~~~ekp~------~~------------~s~~~~~Giy~f~~~~l~~~~~~~~~~~ge~~~td~~~~~- 207 (295)
T 1lvw_A 148 VVEFD-SEGRVISIEEKPS------RP------------KSNYVVPGLYFYDNQVVEIARRIEPSDRGELEITSVNEEY- 207 (295)
T ss_dssp EEEEC-TTSBEEEEEESCS------SC------------SCSEECCSEEEECTTHHHHHHHCCCCTTSCCCHHHHHHHH-
T ss_pred EEEEC-CCCcEEEEEECCC------CC------------CCCEEEEEeEEEcHHHHHHHHhcCCcccCceeHHHHHHHH-
Confidence 88888 6899999998873 12 346788999999999988775421100 012222211
Q ss_pred cChhcccCeeEEEEcCCCce-eeecCChhhHHHHhHHHh
Q psy1482 246 INEEILDCRLYCSVVDDIEY-GISVKDWPSYQIASRDIV 283 (627)
Q Consensus 246 ~~~~~~g~~I~~~~~~~~~~-~~~V~s~~~y~~a~~dil 283 (627)
+...++.++.+..+ | |.+|+++++|..++..+.
T Consensus 208 ----l~~g~~~v~~~~~g-~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 208 ----LRMGKLRVELMGRG-MAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp ----HHTTCEEEEEECTT-CEECCCSSHHHHHHHHHHHH
T ss_pred ----HHcCCcEEEEeCCC-CeEEeCCCHHHHHHHHHHHH
Confidence 22345677777756 5 999999999999887543
No 17
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.94 E-value=6.7e-26 Score=234.62 Aligned_cols=240 Identities=13% Similarity=0.058 Sum_probs=175.5
Q ss_pred CCceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcc-cc------
Q psy1482 15 DEVLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKE-KS------ 85 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~-~~------ 85 (627)
..+|+|||||+|.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|++++..+++.+|+.... |.
T Consensus 10 ~~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 10 NAVKTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp --CCEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred hcceEEEEECCCCccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 34699999999999999999 8999999999999999999999999999999999988889998875321 10
Q ss_pred ------------cCCeeEEEEeCCCCcchhhhhhcccccCCcc-CC--EEEEeCCeecc--ccHHHHHHHHHHHhcCCCC
Q psy1482 86 ------------LVGTLITLIVSDGCYSFGDVMRDLDGKAVIR-ND--FILVSGDVVSN--INLLSALKSFKKINSMDSG 148 (627)
Q Consensus 86 ------------~~~~~v~~i~~~~~~~~gdalr~l~~~~~i~-~d--fll~~gD~i~~--~~l~~~l~~h~~~~~~~~~ 148 (627)
..+.++.++.++...|++++++ .+...+. ++ |+|++||++++ .++..+++.|++. +
T Consensus 90 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~--~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~-----~ 162 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVG--LAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF-----G 162 (323)
T ss_dssp TCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHH--TTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTT-----C
T ss_pred chhhhhhhhhccccCcceEEEeCCccCCcHHHHH--HHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhc-----C
Confidence 0125677777777899999998 4455553 56 99999999987 6899999998764 2
Q ss_pred ceEEEEeeccC--CCCCCCCcceEEEEEC---CC--CeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecC
Q psy1482 149 AVALVLYKKKG--QSKSSWKEDLIVAYEC---DS--KKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICS 221 (627)
Q Consensus 149 ~~~T~~~~~~~--~~~~~~~~~~vv~~d~---~~--~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s 221 (627)
+ .|+++.+.. +..+|+ ++.+|+ ++ ++|+.+.++|... .+ .+++.++|+|+|+
T Consensus 163 ~-~~i~~~~~~~~~~~~yg----~v~~d~~~~~~~~~~V~~~~Ekp~~~----~~------------~~~~~~~GiY~~~ 221 (323)
T 2pa4_A 163 G-SVLCAVEVSEADVSKYG----IFEIEADTKDSDVKKVKGMVEKPAIE----DA------------PSRLAATGRYLLD 221 (323)
T ss_dssp S-EEEEEEECCGGGGGGSE----EEEEEECCSSTTEEEEEEEEESCCTT----TC------------SCSEEEEEEEEEE
T ss_pred C-cEEEEEEecccccCCcc----EEEeCCcccCCCceeEEEEEECCCCc----cc------------cccEEEEEEEEEC
Confidence 3 466655543 333454 776661 23 3999999987310 01 3457789999999
Q ss_pred CchhhhhhcCCCCCchhhh-hcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 222 PAVPPLFSDNFDFQTQEHF-IKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 222 ~~vl~~~~~~fd~~~~~df-i~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
++++..+.....-. +..| +..++......|.+|+++.++ + +|.+|++|++|..+++.++.+
T Consensus 222 ~~~~~~l~~~~~~~-~ge~~l~d~i~~l~~~g~~v~~~~~~-g-~w~DIgt~~dl~~a~~~~~~~ 283 (323)
T 2pa4_A 222 RKIFDALRRITPGA-GGELQLTDAIDLLIDEGHPVHIVIHQ-G-KRHDLGNPGGYIPACVDFGLS 283 (323)
T ss_dssp THHHHHHHHCCCCG-GGCCCHHHHHHHHHHTTCCEEEEECC-S-EEEECSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCC-CCeEeHHHHHHHHHHcCCCEEEEEeC-C-eEEeCCCHHHHHHHHHHHhhc
Confidence 99998876532110 1111 122222111236789999998 7 999999999999999877644
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.93 E-value=1.1e-25 Score=229.26 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=175.0
Q ss_pred ceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEec-CChHHHHHHHHhc-ccccCCeeEE
Q psy1482 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCT-SHVNQIRELVKRK-EKSLVGTLIT 92 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~-~~~~~i~~~l~~~-~~~~~~~~v~ 92 (627)
.|+|||||+|.|+||+|+ .+||+|+||+|+|||+|+|+.|..+|+++|+|+++ ++.+.+++++.+. .|+ +++.
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g---~~i~ 79 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFG---IQLE 79 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGT---CEEE
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcccccC---ceEE
Confidence 489999999999999999 89999999999999999999999999999999986 6789999999763 354 6788
Q ss_pred EEeCCCCcchhhhhhcccccCCcc-CCEEEEeCCee-ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceE
Q psy1482 93 LIVSDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVV-SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLI 170 (627)
Q Consensus 93 ~i~~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i-~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~v 170 (627)
++.++...|++++++ .+...+. ++++++.||.+ .+.++..+++.|.+. ++.++++..++..+.+++ +
T Consensus 80 ~~~~~~~~G~~~al~--~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~-----~~~~~v~~~~v~dp~~yg----~ 148 (296)
T 1mc3_A 80 YAEQPSPDGLAQAFI--IGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAAR-----TEGATVFGYQVMDPERFG----V 148 (296)
T ss_dssp EEECSSCCCSTHHHH--HTHHHHTTSCEEEEETTEEEECSSCHHHHHHHTTC-----CSSEEEEEEECSCCSSSB----B
T ss_pred EeccCCCCCHHHHHH--HHHHHhCCCCEEEEECCccccccCHHHHHHHHHHc-----CCCCEEEEEECCCcccCC----E
Confidence 887888889999987 3444554 67999999986 467899999988653 244566666666666776 7
Q ss_pred EEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhh-hcccccChh
Q psy1482 171 VAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHF-IKGVLINEE 249 (627)
Q Consensus 171 v~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~df-i~~il~~~~ 249 (627)
+.+| ++|+|+.+.++|. .| +++++++|+|+|+++++..+..-.. ..+..+ +.+++.. .
T Consensus 149 v~~d-~~g~v~~~~ekp~------~~------------~s~~~~~Giy~~~~~~l~~~~~~~~-~~~ge~~~td~~~~-~ 207 (296)
T 1mc3_A 149 VEFD-DNFRAISLEEKPK------QP------------KSNWAVTGLYFYDSKVVEYAKQVKP-SERGELEITSINQM-Y 207 (296)
T ss_dssp CEEE-TTEEEEECCBSCS------SC------------SCSEEEEEEEECCTHHHHHHHSCCC-CSSSSCCHHHHHHH-H
T ss_pred EEEC-CCCcEEEEEECCC------CC------------CCCEEEEEEEEEcHHHHHHHHhcCc-cccCCccHHHHHHH-H
Confidence 7788 6899999988773 11 3457889999999999887754211 111111 1112111 1
Q ss_pred cccCeeEEEEcCCCce-eeecCChhhHHHHhHHHh
Q psy1482 250 ILDCRLYCSVVDDIEY-GISVKDWPSYQIASRDIV 283 (627)
Q Consensus 250 ~~g~~I~~~~~~~~~~-~~~V~s~~~y~~a~~dil 283 (627)
+...++.++.+..+ | |.+|+++++|..++..+.
T Consensus 208 l~~g~~~v~~~~~g-~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 208 LEAGNLTVELLGRG-FAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp HHTTCEEEEECCTT-CEEEECCSHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeCCC-CEEEeCCCHHHHHHHHHHHH
Confidence 22346777788766 6 999999999999987654
No 19
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.93 E-value=3.1e-25 Score=226.04 Aligned_cols=227 Identities=18% Similarity=0.181 Sum_probs=173.6
Q ss_pred eEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEec-CChHHHHHHHHhc-ccccCCeeEEE
Q psy1482 18 LQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCT-SHVNQIRELVKRK-EKSLVGTLITL 93 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~-~~~~~i~~~l~~~-~~~~~~~~v~~ 93 (627)
|+|||||+|.|+||+|+ .+||+|+||+|+|||+|+++.|..+|+++|+|+++ ++.+++++++++. +|+ +++.+
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g---~~i~~ 79 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWG---LDLQY 79 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGT---CEEEE
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcccccC---ceEEE
Confidence 78999999999999999 89999999999999999999999999999998885 5788999999763 354 67888
Q ss_pred EeCCCCcchhhhhhcccccCCcc-CCEEEEeCCeec-cccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEE
Q psy1482 94 IVSDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVVS-NINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIV 171 (627)
Q Consensus 94 i~~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i~-~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv 171 (627)
+.++...|++++++ .+...+. ++|+++.||.++ +.++..+++.|.+. ++.++++..++..+.+++ ++
T Consensus 80 ~~~~~~~G~~~al~--~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~-----~~~~~v~~~~v~dp~~~g----~v 148 (293)
T 1fxo_A 80 AVQPSPDGLAQAFL--IGESFIGNDLSALVLGDNLYYGHDFHELLGSASQR-----QTGASVFAYHVLDPERYG----VV 148 (293)
T ss_dssp EECSSCCCGGGHHH--HTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTC-----CSSEEEEEEECSCGGGSE----EE
T ss_pred eeCCCCCCHHHHHH--HHHHHhCCCCEEEEECChhccCccHHHHHHHHHhc-----CCCcEEEEEECCCcccCc----EE
Confidence 88888899999987 3444554 579999999864 67999999988754 244566666666666666 88
Q ss_pred EEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCC----chhhhhcccccC
Q psy1482 172 AYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ----TQEHFIKGVLIN 247 (627)
Q Consensus 172 ~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~----~~~dfi~~il~~ 247 (627)
.+| ++|+++.+.++|. .| ++++.++|+|+|+++++..+..-.... ...|.++..
T Consensus 149 ~~d-~~g~v~~~~ekp~------~~------------~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~--- 206 (293)
T 1fxo_A 149 EFD-QGGKAISLEEKPL------EP------------KSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAY--- 206 (293)
T ss_dssp EEC-TTSCEEEEEESCS------SC------------SSSEEEEEEEEECTTHHHHHHHCCCCTTSSCCHHHHHHHH---
T ss_pred EEC-CCCcEEEEEECCC------CC------------CCCeEEEEEEEEcHHHHHHHHhcCcccCCceeHHHHHHHH---
Confidence 888 6899999998763 11 346788999999999988775421100 012222222
Q ss_pred hhcccCeeEEEEcCCCce-eeecCChhhHHHHhHHHh
Q psy1482 248 EEILDCRLYCSVVDDIEY-GISVKDWPSYQIASRDIV 283 (627)
Q Consensus 248 ~~~~g~~I~~~~~~~~~~-~~~V~s~~~y~~a~~dil 283 (627)
+...++.++.+..+ | |.+|+++++|..++..+.
T Consensus 207 --l~~g~~~v~~~~~g-~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 207 --LERGQLSVEIMGRG-YAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp --HHTTCEEEEECCTT-SEEEECCSHHHHHHHHHHHH
T ss_pred --HhcCCeEEEEeCCC-CEEEcCCCHHHHHHHHHHHH
Confidence 22346777777656 5 999999999999887553
No 20
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.92 E-value=1.2e-25 Score=224.38 Aligned_cols=220 Identities=11% Similarity=0.067 Sum_probs=157.4
Q ss_pred EEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHh-CCCcEEEEEecCChHHHHHHHHhc--ccccCCeeEEEE
Q psy1482 20 AVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHL-SGIEEIIVFCTSHVNQIRELVKRK--EKSLVGTLITLI 94 (627)
Q Consensus 20 aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~-~gi~~i~vv~~~~~~~i~~~l~~~--~~~~~~~~v~~i 94 (627)
+||||||.||||+|+ .+||||+||+|+|||+|+|+.|.. +|+++|+|++++..+ +++++.+. .|+.... ..++
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~-~~~~ 79 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIKQF-YIAE 79 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSE-EEEE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCCCc-eEEE
Confidence 799999999999999 899999999999999999999999 799999999998655 55555431 2221112 2455
Q ss_pred eCCCCcchhhhhhcccccCCc-------cCCEEEEeCCeec-cccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCC
Q psy1482 95 VSDGCYSFGDVMRDLDGKAVI-------RNDFILVSGDVVS-NINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWK 166 (627)
Q Consensus 95 ~~~~~~~~gdalr~l~~~~~i-------~~dfll~~gD~i~-~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~ 166 (627)
.++...|+++|++ .+...+ +++|+|++||+++ +.++..+ .. ++.+|+++.+...+ +||
T Consensus 80 ~~~~~~Gt~~av~--~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~-----~~~~~i~~~~~~~p-~yG- 145 (255)
T 4evw_A 80 LHTETRGQAETVT--LGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQ-----HSDGYLEVFQGGGD-NWS- 145 (255)
T ss_dssp ESSCCSSHHHHHH--HHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GG-----SSSEEEEEEECCSS-CSC-
T ss_pred eCCCCCCHHHHHH--HHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hh-----cCCcEEEEEecCCC-cee-
Confidence 5788899999998 445555 4679999999988 5565442 11 35567777776554 676
Q ss_pred cceEEEEECCCC--eEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCc--hhh----hhhcCCCCC-ch
Q psy1482 167 EDLIVAYECDSK--KLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPA--VPP----LFSDNFDFQ-TQ 237 (627)
Q Consensus 167 ~~~vv~~d~~~~--~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~--vl~----~~~~~fd~~-~~ 237 (627)
++..| ++| +|+.+.|++. .++++++|+|+|++. +++ ++..+.... ..
T Consensus 146 ---~v~~d-~~g~~~V~~i~EK~~--------------------~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~g 201 (255)
T 4evw_A 146 ---FAKPE-HAGSTKVIQTAEKNP--------------------ISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERG 201 (255)
T ss_dssp ---EEEES-STTCCBEEEEESSSC--------------------SSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCS
T ss_pred ---EEEEC-CCCCeEEEEEEeccC--------------------ccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCC
Confidence 88887 567 9999999753 357889999999996 222 222211100 11
Q ss_pred hhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 238 EHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 238 ~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
+-++.+++......|.+|+++.++.+ +|.++|++++|.++.+
T Consensus 202 E~~ltd~i~~li~~g~~v~~~~~~~~-~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 202 ELYIAPLYNELIQKGLNIHYHLIARH-EVIFCGVPDEYTDFLR 243 (255)
T ss_dssp CCCSTTHHHHHHHTTCCEEEEECCGG-GCEECCSHHHHHHHHH
T ss_pred eEehHHHHHHHHHCCCEEEEEEeccc-cEEECCCHHHHHHHHh
Confidence 22233333322235778999998656 9999999999988755
No 21
>3d3m_A Eukaryotic translation initiation factor 4 gamma 2; heat repeat domain, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=200.39 Aligned_cols=149 Identities=14% Similarity=0.188 Sum_probs=126.3
Q ss_pred HHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc---CC-C-------CCchhHHHHHHHHHhh
Q psy1482 471 EVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN---KP-D-------MDMKSFHTHMMSKINY 539 (627)
Q Consensus 471 ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~---~~-~-------~~~~~~~~~~~~~~~~ 539 (627)
+++..|.+.+.++.+++.+..-|+.-.-..++++++|+++++.|+|+.+. .+ . ...++..+++++.|++
T Consensus 3 ~~~~~L~~~l~~~~~~~~i~~~i~en~~~~~~s~~ev~~al~~avl~~i~~~~~~~~~~~d~~~~~~k~~~~~~~~~l~~ 82 (168)
T 3d3m_A 3 KLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNPPSDETDSSSAPSKEQLEQEKQLLLS 82 (168)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHSCGGGGGCHHHHHHHHHHHHHHHHHHHSCCC-------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHHHHHHhccccccccccccccchhHHHHHHHHHHH
Confidence 56677777777777777777777766666667999999999999999875 11 1 1123455788999999
Q ss_pred HHHHHHHhhcC-cHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhhcCC-----chhHHhhhHHHH
Q psy1482 540 FLPLFKNYIKN-ESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE-----PSSLRKSVEPFV 613 (627)
Q Consensus 540 ~~~ll~~~~~~-~~~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~-----~~~~~~~~~~fi 613 (627)
|+|+|.+|+++ .+.|+++|+++|.||.+++.+.+.|+.||+.|||.|||+||+|++||++.+ +++++++++|||
T Consensus 83 ~~~ll~~~~~~~~~~q~~lL~alq~~~~~~~~~~~~~~~il~~LYd~DvleEe~il~W~~~~~~~~~~~~~~~~~~~~Fi 162 (168)
T 3d3m_A 83 FKPVMQKFLHDHVDLQVSALYALQVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWL 162 (168)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHTTSSCHHHHHHHHHCCSCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHhhcchhhHHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 99999999986 789999999999999998888899999999999999999999999998754 467999999999
Q ss_pred HHhccc
Q psy1482 614 KWLLEA 619 (627)
Q Consensus 614 ~WL~ea 619 (627)
+||+||
T Consensus 163 ~WL~eA 168 (168)
T 3d3m_A 163 TWLETA 168 (168)
T ss_dssp HHHHCC
T ss_pred HHHhcC
Confidence 999997
No 22
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.91 E-value=4.3e-24 Score=219.49 Aligned_cols=236 Identities=9% Similarity=0.127 Sum_probs=149.1
Q ss_pred ceEEEEEeCCCCCCCCcC-C--CCcccccc-CCeehHHHHHHHHHhCCCcEEEEEecCC-hHHHHHHHHhcccccCCe-e
Q psy1482 17 VLQAVIVTDTFNRNFFPV-P--EPYCLLPL-VNKCLLEYTLEHLHLSGIEEIIVFCTSH-VNQIRELVKRKEKSLVGT-L 90 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl-~--~PK~Llpi-~g~pli~~~l~~L~~~gi~~i~vv~~~~-~~~i~~~l~~~~~~~~~~-~ 90 (627)
.|+|||||+|.|+||+|+ . +||+|+|| +|+|||+|+++.|..+ +++|+|++++. .+.+++++... |+ + +
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~-~~---~~~ 78 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE-IK---NKS 78 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-CS---SCE
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-hC---CCc
Confidence 489999999999999999 3 79999999 5999999999999999 99999999975 57888888652 43 4 5
Q ss_pred EEEEeCCCCcchhhhhhcccccCCcc-CC-EEEEeCCeec-ccc-HHHHHHH---HHHHhcCCCCceEEEEeeccCCCCC
Q psy1482 91 ITLIVSDGCYSFGDVMRDLDGKAVIR-ND-FILVSGDVVS-NIN-LLSALKS---FKKINSMDSGAVALVLYKKKGQSKS 163 (627)
Q Consensus 91 v~~i~~~~~~~~gdalr~l~~~~~i~-~d-fll~~gD~i~-~~~-l~~~l~~---h~~~~~~~~~~~~T~~~~~~~~~~~ 163 (627)
+.++.++...|++++++. +...+. ++ |+|++||+++ +.+ +..+++. |.+. ++.+|+++.+..++..
T Consensus 79 ~~~i~~~~~~gt~~al~~--a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~t~~~~~~~~~~~ 151 (308)
T 2qh5_A 79 VGFLLESLSKNTANAIAL--SALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQK-----GFLVTFGVSIDKPNTE 151 (308)
T ss_dssp EEEEEESSCCCHHHHHHH--HHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHT-----TCEEEEEEECSSCCTT
T ss_pred cEEEeCCCCCChHHHHHH--HHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhc-----CCEEEEEEecCCCCCC
Confidence 677777788999999884 344454 44 9999999997 676 8999987 4443 4788999888776666
Q ss_pred CCCcceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcC-----------
Q psy1482 164 SWKEDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDN----------- 231 (627)
Q Consensus 164 ~~~~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~----------- 231 (627)
|+ ++.+| ++++|+.|.++|+... ....+.. .+.++++|+|+|++++| +.|...
T Consensus 152 ~g----~i~~d-~~~~V~~~~Ekp~~~~----~~~~~~~------g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~ 216 (308)
T 2qh5_A 152 FG----YIESP-NGLDVKRFIEKPSLDK----AIEFQKS------GGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERA 216 (308)
T ss_dssp SE----EEECS-SSSBCSEEEESCCHHH----HHHHHHH------CCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ce----EEEEC-CCCEEEEEEECCChHH----HHHHhhc------CCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHHH
Confidence 76 77666 5789999999874100 0000000 13578999999999875 333311
Q ss_pred -----------CCCCc-hhhhhcc---c-ccC-hhcccCeeEEEEcCCCceeeecCChhhHHHHhHH
Q psy1482 232 -----------FDFQT-QEHFIKG---V-LIN-EEILDCRLYCSVVDDIEYGISVKDWPSYQIASRD 281 (627)
Q Consensus 232 -----------fd~~~-~~dfi~~---i-l~~-~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~d 281 (627)
..+.. ..++++. + +.. ....|.+|+++..+ + +|.+|++|++|.+++..
T Consensus 217 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~-~-~w~digt~~~l~~~~~~ 281 (308)
T 2qh5_A 217 FESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELN-A-KWSDLGNFNALFEEAAN 281 (308)
T ss_dssp GGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECC-S-CCBC-------------
T ss_pred hhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECC-C-ceeCCCCHHHHHHHhhc
Confidence 00000 0122211 0 000 01236789999998 6 99999999999888764
No 23
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.1e-24 Score=196.26 Aligned_cols=109 Identities=20% Similarity=0.472 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHHHHhhcCcHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHh
Q psy1482 505 KEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFKNYIKNESAQQDCLDAFEEFAE-ENESLSVVAGKLLHKLY 583 (627)
Q Consensus 505 ~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~q~~~l~ale~~~~-~~~~~~~~~~~il~~lY 583 (627)
++++.+++.++|+. ++.++|++|+|+|.+|+++.+.|+++|.+||.||. .++.+++.|++||+.||
T Consensus 50 ~~~~~vl~~~lf~~-------------~i~~~l~k~~~lL~~~~~~~~~q~~lL~ale~~~~~~~~~~~~~~~~IL~~LY 116 (177)
T 2ful_A 50 PKIGCVLAQCLFDE-------------DIVNEIAEHNAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLLPKILVQLY 116 (177)
T ss_dssp TTHHHHHHHHSCST-------------THHHHTTSCHHHHHHHCCSHHHHHHHHHHHHHHHHTTCGGGGGGHHHHHHHHH
T ss_pred hHHHHHHHHHHhch-------------hHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHh
Confidence 78898999998864 46678999999999999988999999999999995 77788899999999999
Q ss_pred hcCCCChhhHhhhhhcCC--------chhHHhhhHHHHHHhccccCCCCCC
Q psy1482 584 DKDILSEDIVTKWFNKLE--------PSSLRKSVEPFVKWLLEADEESEED 626 (627)
Q Consensus 584 d~dil~Ee~il~W~~~~~--------~~~~~~~~~~fi~WL~eaeee~~ee 626 (627)
|.|||+||+|++||++.+ .+++|++++|||+||+|||||||||
T Consensus 117 d~DIleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI~WL~eAEEEseee 167 (177)
T 2ful_A 117 NNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLETAESDDDEE 167 (177)
T ss_dssp HTTSSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHHHHHHHCC------
T ss_pred ccchhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHccccccccc
Confidence 999999999999997642 4579999999999999999887654
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.89 E-value=1.2e-22 Score=202.50 Aligned_cols=243 Identities=12% Similarity=0.095 Sum_probs=170.4
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
+.|||||+|.|+|| | ||+|+||+|+|||+|+++.|..+|+++|+|+++ .++|+++++. |+ +++.+..++
T Consensus 3 ~~aiIlA~G~stRl-p---~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~--~g---~~v~~~~~~ 71 (252)
T 3oam_A 3 FTVVIPARYQSTRL-P---GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA--FG---GVVCMTSPN 71 (252)
T ss_dssp EEEEEECCCCCSSS-T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--TT---CEEEECCTT
T ss_pred eEEEEecCcCCCCC-C---CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH--cC---CEEEEcCCC
Confidence 67999999999999 4 799999999999999999999999999999985 4889888875 33 566555567
Q ss_pred CCcchhhhhhcccccCCcc-CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC-CcceEEEE
Q psy1482 98 GCYSFGDVMRDLDGKAVIR-NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW-KEDLIVAY 173 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~i~-~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~-~~~~vv~~ 173 (627)
...|++.+...+......+ +.|++++||. +....+..+++.|++. ++.+|++..++..+..+. ++.+.+.+
T Consensus 72 ~~~Gt~~~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~-----~~~~~~~~~~v~~~~~~~~p~~g~vv~ 146 (252)
T 3oam_A 72 HQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC-----SAPMATLAVEIEDEAEVFNPNAVKVIT 146 (252)
T ss_dssp CCSHHHHHHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHS-----SCSEEEEEEEECCHHHHTCTTSCEEEE
T ss_pred CCCcHHHHHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhc-----CCCEEEEeeecCCHHHhhCCCceEEEE
Confidence 7788888655332111112 4599999998 4567899999999764 567888888776554442 33457888
Q ss_pred ECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCc-hhhhhcccccChhccc
Q psy1482 174 ECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQT-QEHFIKGVLINEEILD 252 (627)
Q Consensus 174 d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~-~~dfi~~il~~~~~~g 252 (627)
| ++|+++.|.++|-... ++-+..........+++++|||+|++++|..+........ +.+.+.. + .....|
T Consensus 147 d-~~g~v~~fsr~~i~~~-----~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~-l-r~l~~G 218 (252)
T 3oam_A 147 D-KSGYALYFSRATIPWD-----RDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ-L-RVLWHG 218 (252)
T ss_dssp C-TTSBEEEEESSCSSCC-----HHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTT-H-HHHHTT
T ss_pred C-CCCeEEEEeCCCCCCC-----CCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHH-H-HHHHCC
Confidence 8 7899999999762110 1100000000013468899999999999998876422111 2222211 1 011248
Q ss_pred CeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 253 CRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 253 ~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
.+|+++...+. +|.+|+++++|..+.+.+-+|
T Consensus 219 ~~i~~~~~~~~-~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 219 EKIHVAVALEA-PPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CCEEEEECSSC-CCCCCCSHHHHHHHHHHHHHT
T ss_pred CeEEEEEecCC-CCCCCCCHHHHHHHHHHHHhh
Confidence 89999877655 899999999999998765443
No 25
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.88 E-value=9.8e-23 Score=211.25 Aligned_cols=232 Identities=12% Similarity=0.100 Sum_probs=161.8
Q ss_pred ceEEEEEeCCCCCCCCcC---CCCccccccCC-eehHHHHHHHHHhC-CCcEEEEEecC-ChHHHHHHHHhcccccCCee
Q psy1482 17 VLQAVIVTDTFNRNFFPV---PEPYCLLPLVN-KCLLEYTLEHLHLS-GIEEIIVFCTS-HVNQIRELVKRKEKSLVGTL 90 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl---~~PK~Llpi~g-~pli~~~l~~L~~~-gi~~i~vv~~~-~~~~i~~~l~~~~~~~~~~~ 90 (627)
+|+|||||+|.|+||+|+ .+||+|+|++| +|||+|+++.|..+ |+++|+|++++ +...+.+++.... ..
T Consensus 1 mm~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~----~~- 75 (336)
T 2x65_A 1 VMKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP----DE- 75 (336)
T ss_dssp CCEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC----GG-
T ss_pred CeEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc----cc-
Confidence 489999999999999999 48999999999 99999999999986 89999999997 4678888886521 12
Q ss_pred EEEEeCCCCcchhhhhhcccccCCcc--CCEEEEeCCeeccc--cH----HHHHHHHHHHhcCCCCceEEEEeeccCCCC
Q psy1482 91 ITLIVSDGCYSFGDVMRDLDGKAVIR--NDFILVSGDVVSNI--NL----LSALKSFKKINSMDSGAVALVLYKKKGQSK 162 (627)
Q Consensus 91 v~~i~~~~~~~~gdalr~l~~~~~i~--~dfll~~gD~i~~~--~l----~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~ 162 (627)
.++.++...++++++... ...+. +.|++++||++... ++ ..+++.|++. ++.+|+.+++..+..
T Consensus 76 -~ii~e~~~~gta~ai~~a--~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~-----~~~vt~~i~p~~~~~ 147 (336)
T 2x65_A 76 -NIIAEPMKKNTAPACFIG--TKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKY-----DGLFTFGIVPTRPET 147 (336)
T ss_dssp -GEEEESSCCCHHHHHHHH--HTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHH-----CSEEEEEECCCSCCS
T ss_pred -eEEeCCCCCCcHHHHHHH--HHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhc-----CCeEEEEeecccCCC
Confidence 235566778999998843 33343 34899999998754 44 4444556654 478999988887766
Q ss_pred CCCCcceEEEEECCC-----CeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCC----
Q psy1482 163 SSWKEDLIVAYECDS-----KKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNF---- 232 (627)
Q Consensus 163 ~~~~~~~vv~~d~~~-----~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~f---- 232 (627)
.|| ++..+ +. ++|..|.|+|+.. .....+.. ...++++|+|+|+++++ +.|+...
T Consensus 148 ~yG----~I~~~-~~~~~~~~~V~~f~EKp~~~----~a~~~~~~------g~y~~n~Giy~~~~~~ll~~l~~~~p~~~ 212 (336)
T 2x65_A 148 GYG----YIEIG-EELEEGVHKVAQFREKPDLE----TAKKFVES------GRFLWNSGMFLWKAREFIEEVKVCEPSIY 212 (336)
T ss_dssp SSE----EEEEE-EEEETTEEEEEEEEESCCHH----HHHHHHHH------TCEEEEEEEEEEEHHHHHHHHHHHCHHHH
T ss_pred Cce----EEEEC-CccCCCccEEEEEEECCChH----HHHHHHhc------CCeEEEeeeEEEEHHHHHHHHHHHCHHHH
Confidence 776 77766 33 7899999988510 00001100 12478999999999876 4443210
Q ss_pred ---CC--CchhhhhcccccC--------hh-cccCeeEEEEcCCCceeeecCChhhHHHH
Q psy1482 233 ---DF--QTQEHFIKGVLIN--------EE-ILDCRLYCSVVDDIEYGISVKDWPSYQIA 278 (627)
Q Consensus 233 ---d~--~~~~dfi~~il~~--------~~-~~g~~I~~~~~~~~~~~~~V~s~~~y~~a 278 (627)
.. ...++|+...+.. .. ..+.+++++..+ + +|.+|++|.+|.++
T Consensus 213 ~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~-~-~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 213 ENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKAD-F-EWSDLGNWSSVREI 270 (336)
T ss_dssp HHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECS-S-CCBCCCSHHHHHHH
T ss_pred HHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEec-C-CCcCCCCHHHHHhh
Confidence 00 0001333222211 00 135789999988 6 89999999999988
No 26
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=99.87 E-value=3.1e-22 Score=189.00 Aligned_cols=120 Identities=24% Similarity=0.428 Sum_probs=97.0
Q ss_pred hHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHHHHhhc-CcHHHHHHHHHHHHHHh
Q psy1482 488 NLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFKNYIK-NESAQQDCLDAFEEFAE 566 (627)
Q Consensus 488 ~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~q~~~l~ale~~~~ 566 (627)
.+..+.+.+.. .+....+++.++++. ++.++|++|+|+|.+|++ +...|+++|.+||.||.
T Consensus 31 ~i~~ea~~l~~-----k~~~~~vl~e~lf~~-------------~i~~~l~k~~~lL~~~~~~~~~~Q~~lL~alE~~~~ 92 (208)
T 2iu1_A 31 EIVAEAERLDV-----KAMGPLVLTEVLFNE-------------KIREQIKKYRRHFLRFCHNNKKAQRYLLHGLECVVA 92 (208)
T ss_dssp HHHHHHHHTTC-----GGGHHHHHHHHHCST-------------THHHHHHHTHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcch-----HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 67777765544 234444556666643 466789999999999998 55899999999999976
Q ss_pred h-ccchHHHHHHHHHHHhhcCCCChhhHhhhhhcCC--------chhHHhhhHHHHHHhccccCCCCC
Q psy1482 567 E-NESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE--------PSSLRKSVEPFVKWLLEADEESEE 625 (627)
Q Consensus 567 ~-~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~--------~~~~~~~~~~fi~WL~eaeee~~e 625 (627)
. ++.+++.|++||+.||+.|||+|++|++||++.+ .+++|++++|||+||+|||||||+
T Consensus 93 ~~~~~~~~~~~~IL~~LYD~DIleEEaIl~W~~~~s~~~~~~e~~k~v~~~~~pFI~WL~EAEEEs~e 160 (208)
T 2iu1_A 93 MHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAEEESSG 160 (208)
T ss_dssp HTHHHHGGGHHHHHHHHHHTTSSCHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred hccchHHHHHHHHHHHHhccchhhhHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 5 4567889999999999999999999999998753 236899999999999999988763
No 27
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.87 E-value=2.6e-22 Score=200.40 Aligned_cols=217 Identities=15% Similarity=0.193 Sum_probs=150.9
Q ss_pred ceEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEE
Q psy1482 17 VLQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLI 94 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i 94 (627)
.|+|||||||.|+||+|+ .+||+|+|++|+|||+|+++.|..+|+++|+|++++..++++.+... |+ +.++
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~--~~-----~~iv 97 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK--YG-----VRLV 97 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH--HC-----CEEE
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh--CC-----cEEE
Confidence 488999999999999999 89999999999999999999999999999999999877777655532 43 4455
Q ss_pred eCCC--CcchhhhhhcccccCCccCCEEEEeCCeeccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEEE
Q psy1482 95 VSDG--CYSFGDVMRDLDGKAVIRNDFILVSGDVVSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVA 172 (627)
Q Consensus 95 ~~~~--~~~~gdalr~l~~~~~i~~dfll~~gD~i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv~ 172 (627)
.++. ..|++++++ .+...+ +++++++||+++..++ ++.+.+ .++.+|+.... +...++ + .
T Consensus 98 ~~~~~~~~g~~~al~--~a~~~~-~~~lv~~~D~~~~~~~---~~~~~~-----~~~~~t~~~~~--~~~~~~----v-~ 159 (254)
T 1jyk_A 98 FNDKYADYNNFYSLY--LVKEEL-ANSYVIDADNYLFKNM---FRNDLT-----RSTYFSVYRED--CTNEWF----L-V 159 (254)
T ss_dssp ECTTTTTSCTHHHHH--TTGGGC-TTEEEEETTEEESSCC---CCSCCC-----SEEEEECEESS--CSSCCE----E-E
T ss_pred ECCCccCCCcHHHHH--HHHHHC-CCEEEEeCCcccCHHH---HHHHHh-----CCceEEEEccc--CCCCeE----E-E
Confidence 5443 467778877 344445 3699999999876553 222221 13555554322 222343 4 3
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhc----CCCCCc-hhhhhcccccC
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSD----NFDFQT-QEHFIKGVLIN 247 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~----~fd~~~-~~dfi~~il~~ 247 (627)
+| ++|+|+.+.+++ ...++++|+|+|+++.+..|.+ ...... .+.++..++..
T Consensus 160 ~d-~~g~v~~~~e~~---------------------~~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~~~d~~~~ 217 (254)
T 1jyk_A 160 YG-DDYKVQDIIVDS---------------------KAGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKD 217 (254)
T ss_dssp EC-TTCBEEEEECCC---------------------SSEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHT
T ss_pred EC-CCCeEEEEEECC---------------------CCCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccCHHHHHHH
Confidence 77 678999998854 2347899999999875543322 111000 12233333322
Q ss_pred hhcccCeeEEEEcCCCceeeecCChhhHHHHhHHH
Q psy1482 248 EEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDI 282 (627)
Q Consensus 248 ~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~di 282 (627)
...+.+|+++.++.+ +|.+|+++++|..+.+.+
T Consensus 218 -l~~~~~v~~~~~~~~-~~~~Idt~edl~~a~~~l 250 (254)
T 1jyk_A 218 -NIKELDVYVEELEGN-SIYEIDSVQDYRKLEEIL 250 (254)
T ss_dssp -TGGGCCEEEEECCTT-SEEECCSHHHHHHHHHHH
T ss_pred -HHhhCCeEEEEecCC-eEEEcCCHHHHHHHHHHh
Confidence 245788999999767 999999999999987754
No 28
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.85 E-value=1.7e-21 Score=202.07 Aligned_cols=228 Identities=15% Similarity=0.130 Sum_probs=158.1
Q ss_pred eEEEEEeCCCCCCCCcC---CCCccccccCC-eehHHHHHHHHHhC-CCcEEEEEecCC-hHHHHHHHHhcccccCCeeE
Q psy1482 18 LQAVIVTDTFNRNFFPV---PEPYCLLPLVN-KCLLEYTLEHLHLS-GIEEIIVFCTSH-VNQIRELVKRKEKSLVGTLI 91 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl---~~PK~Llpi~g-~pli~~~l~~L~~~-gi~~i~vv~~~~-~~~i~~~l~~~~~~~~~~~v 91 (627)
|.+||||+|.|+||+|+ .+||+|+|++| +|||+|+++.|..+ |+++|+|++++. ...+.+++.. ..+
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~-------~~~ 75 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG-------IRL 75 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS-------SEE
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc-------Cce
Confidence 79999999999999999 46999999999 99999999999988 899999999974 5666666543 233
Q ss_pred EEEeCCCCcchhhhhhcccccCCc----cCCEEEEeCCeeccc--cHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC
Q psy1482 92 TLIVSDGCYSFGDVMRDLDGKAVI----RNDFILVSGDVVSNI--NLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW 165 (627)
Q Consensus 92 ~~i~~~~~~~~gdalr~l~~~~~i----~~dfll~~gD~i~~~--~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~ 165 (627)
+.++...+++.++.... .+. .+.|++++||++... .+..+++...+.... ++.+|+.+++..++..||
T Consensus 76 --i~e~~~~gta~ai~~a~--~l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~--~~~vt~~i~p~~~~t~yG 149 (337)
T 2cu2_A 76 --LLEPLGRDTAGAVLLGV--AEALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE--GFVVALGLRPTRPETEYG 149 (337)
T ss_dssp --EEESSCCHHHHHHHHHH--HHHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT--TCEEEEEECCSSCCSSSC
T ss_pred --EecCCCCCcHHHHHHHH--HHhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc--CCeEEEeeccCCCCCCce
Confidence 44566789999887432 211 245999999998753 455555543332211 478999998887777777
Q ss_pred CcceEEEEECCC----CeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchh-hhhhcCC-CC-C---
Q psy1482 166 KEDLIVAYECDS----KKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVP-PLFSDNF-DF-Q--- 235 (627)
Q Consensus 166 ~~~~vv~~d~~~----~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl-~~~~~~f-d~-~--- 235 (627)
++..+ ++ ++|..|.|+|+.. .....+.. . .++++|+|+|+++++ +.|+... +. .
T Consensus 150 ----~I~~~-~~~~~~~~V~~f~EKp~~~----~a~~~~~~------g-~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~ 213 (337)
T 2cu2_A 150 ----YIRLG-PREGAWYRGEGFVEKPSYA----EALEYIRK------G-YVWNGGVFAFAPATMAELFRRHLPSHHEALE 213 (337)
T ss_dssp ----EEEEE-EEETTEEEEEEEECCCCHH----HHHHHHHT------T-CEEEEEEEEECHHHHHHHHHHHCHHHHHHHH
T ss_pred ----EEEEC-CcccccCeEEEEEeCCChH----HHHHHhhc------C-CEEEEEEEEEeHHHHHHHHHHHCHHHHHHHH
Confidence 77776 33 7899999988510 00011100 1 578999999999977 5554310 00 0
Q ss_pred -------chhhhhc--------ccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 236 -------TQEHFIK--------GVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 236 -------~~~dfi~--------~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
..+.|.. .++ ..+.+++++..+ + +|.+|++|.+|.++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~sidy~vm----e~~~~v~v~~~~-~-~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 214 RLLAGASLEEVYAGLPKISIDYGVM----EKAERVRVVLGR-F-PWDDVGNWRALERVFS 267 (337)
T ss_dssp HHHTTCCHHHHHHTSCCCCHHHHTG----GGCSSEEEEEEC-S-CEECCCSTTHHHHHHT
T ss_pred HHhcCCcHHHHHhhCccchHHHHHh----hCCCcEEEEEeC-C-cEEcCCCHHHHHHHhh
Confidence 0011211 012 135689999888 6 8999999999988643
No 29
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=195.24 Aligned_cols=150 Identities=14% Similarity=0.183 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc---CCC--------CCchhHHHHHHHHHh
Q psy1482 470 TEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN---KPD--------MDMKSFHTHMMSKIN 538 (627)
Q Consensus 470 ~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~---~~~--------~~~~~~~~~~~~~~~ 538 (627)
.++...|.+.++++.+.+.++..|+...-...++.+++++++|+++|+.+. ++. .+.+......+++|+
T Consensus 198 ~~l~~~L~~~l~~~~~~~~i~~wik~n~~~~~~~~~~fir~L~t~v~~~~~~~~~~~~~~~d~~~~~~k~~~~~~~~~l~ 277 (364)
T 3l6a_A 198 LKLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNPPSDETDSSSAPSKEQLEQEKQLLL 277 (364)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHHHHHHHC----------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHhCCcccCCCHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999873 210 112344456678899
Q ss_pred hHHHHHHHhhcCcH-HHHHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhhcCC-----chhHHhhhHHH
Q psy1482 539 YFLPLFKNYIKNES-AQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE-----PSSLRKSVEPF 612 (627)
Q Consensus 539 ~~~~ll~~~~~~~~-~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~-----~~~~~~~~~~f 612 (627)
+|+|+|++|+++.. .|+++|+++|.+|.+...+.+.++.+++.|||.|||+||+|++||++.+ +.+++++++||
T Consensus 278 ~~~~ll~~~~~~~~~~q~~~L~alq~~~~~~~~~~~~l~~il~~LYd~DileEe~il~W~~~~~~~~~~k~~~~~~~~~F 357 (364)
T 3l6a_A 278 SFKPVMQKFLHDHVDLQVSALYALQVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQW 357 (364)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHTTSSCHHHHHHHHHCCCCSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCcccchHHHHHHHHHHH
Confidence 99999999999875 5999999999999986655567899999999999999999999998754 46799999999
Q ss_pred HHHhccc
Q psy1482 613 VKWLLEA 619 (627)
Q Consensus 613 i~WL~ea 619 (627)
|+||+||
T Consensus 358 i~WL~eA 364 (364)
T 3l6a_A 358 LTWLETA 364 (364)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999987
No 30
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.82 E-value=6.8e-20 Score=182.11 Aligned_cols=239 Identities=10% Similarity=0.039 Sum_probs=152.9
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
+.|||||+|.|+||. ||+|+||+|+|||+|+++.+..+|+++|+|+++ .+.++++++. ++ .++.+..++
T Consensus 10 ~~aIIlA~G~stRl~----~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~--~g---~~v~~~~~~ 78 (256)
T 3tqd_A 10 FRVIIPARFDSTRLP----GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED--FG---AVVCMTSSD 78 (256)
T ss_dssp CEEEEECCCC---CT----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--TT---CEEEECCTT
T ss_pred ceEEEEcCCCCCCCC----CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--cC---CeEEEeCCC
Confidence 579999999999994 799999999999999999999999999999986 4788888875 33 555554456
Q ss_pred CCcchhhhhhcccccCC-ccCCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC-CcceEEEE
Q psy1482 98 GCYSFGDVMRDLDGKAV-IRNDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW-KEDLIVAY 173 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~-i~~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~-~~~~vv~~ 173 (627)
...|++.+...+..... -.+.|+++.||. +....+..+++.|++. +++.++++..+..+..++. ++...|++
T Consensus 79 ~~~Gt~~i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~----~~~~~a~l~~~v~~~~~~~~p~~vkvv~ 154 (256)
T 3tqd_A 79 HQSGTERIAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEH----DNVKVASLCTPITEVDELFNPHSTKVVL 154 (256)
T ss_dssp CCSHHHHHHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHC----C--CEEEEEEECCCHHHHTCTTSCEEEE
T ss_pred CCCcHHHHHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhC----CCCCEEEEeeEcCCHHHhhCCCccEEEE
Confidence 66777663322211110 124599999999 3456889999988753 2345555555543222211 22223567
Q ss_pred ECCCCeEEEeeCCCCCCCccccchhhhccCCc-EEEEecCCcceeeecCCchhhhhhcCCCCC-chhhhhcccccChhcc
Q psy1482 174 ECDSKKLLMHQTPQDNQKKVNIPMENILLYSK-LEICAHLASTGIMICSPAVPPLFSDNFDFQ-TQEHFIKGVLINEEIL 251 (627)
Q Consensus 174 d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~-~~~dfi~~il~~~~~~ 251 (627)
| ++|++++|+++|-+ .|++.+...+. ....+++...|+|++++++|..|..-.... ++.+-+.. | .....
T Consensus 155 d-~~g~~l~fsr~pip-----~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~leq-l-r~le~ 226 (256)
T 3tqd_A 155 N-RRNYALYFSHAPIP-----WGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQ-L-RILWH 226 (256)
T ss_dssp C-TTSBEEEEESSCSS-----CCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTT-H-HHHHT
T ss_pred C-CCCEEeEEecCCCC-----CCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhHH-H-HHHHC
Confidence 8 78999999998731 11110000000 000246789999999999999887632110 01111110 0 01136
Q ss_pred cCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 252 DCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 252 g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
|.+|+++.++.. .|.+|++|++|.++.+
T Consensus 227 G~~i~~~~~~~~-~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 227 GGRIHMVVAKSK-CPPGVDTEEDLERVRA 254 (256)
T ss_dssp TCCCEEEECSSC-CCCCCSSHHHHHHHHT
T ss_pred CCeEEEEEeCCC-CCCCcCCHHHHHHHHH
Confidence 899999999843 5899999999988754
No 31
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.81 E-value=1.1e-19 Score=181.30 Aligned_cols=237 Identities=12% Similarity=0.071 Sum_probs=160.3
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
+.|||||+|.|+|| | +|+|+||+|+|||+|+++.+..+|+++|+|++. .+.++++++. ++ .++.+..++
T Consensus 19 ~~aIIlA~G~stRl-p---~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~--~g---~~v~~~~~~ 87 (264)
T 3k8d_A 19 FVVIIPARYASTRL-P---GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEA--AG---GEVCMTRAD 87 (264)
T ss_dssp CEEEEECCSCCSSS-T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--TT---CEEEECCTT
T ss_pred eEEEEEcCCCCCCC-C---CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--cC---CEEEEecCC
Confidence 68999999999998 2 599999999999999999999999999999885 5778888865 33 455444466
Q ss_pred CCcchhhhhhcccccCCcc-CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC-CcceEEEE
Q psy1482 98 GCYSFGDVMRDLDGKAVIR-NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW-KEDLIVAY 173 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~i~-~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~-~~~~vv~~ 173 (627)
...|++.+...+......+ +.|+++.||. +....+..+++.|++. ++.++++..++..+..++ ++...|++
T Consensus 88 ~~~Gt~~i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~-----~~~~~~~~~~v~d~~~~~~p~~vkVv~ 162 (264)
T 3k8d_A 88 HQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQR-----QVGMATLAVPIHNAEEAFNPNAVKVVL 162 (264)
T ss_dssp CCSHHHHHHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTS-----SCSEEEEEEECCSHHHHTCTTSCEEEE
T ss_pred CCCCHHHHHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc-----CCCEEEEEEEcCCHHHccCCCceEEEE
Confidence 6777776433221111112 4599999998 4567899999988753 577777777765433332 23334567
Q ss_pred ECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhcccccC--hhcc
Q psy1482 174 ECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLIN--EEIL 251 (627)
Q Consensus 174 d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~~--~~~~ 251 (627)
| ++|+++.|++++-+ .+++.+...........+.++|+|+|+++++..|... . .+.-+.. ..|.. ....
T Consensus 163 d-~~g~~l~fsr~~ip-----~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~-~-~~~lE~~-e~leqlr~le~ 233 (264)
T 3k8d_A 163 D-AEGYALYFSRATIP-----WDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNW-Q-PSPLEHI-EMLEQLRVLWY 233 (264)
T ss_dssp C-TTSBEEEEESSCCS-----CCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHS-C-CCHHHHH-HTCTTHHHHHT
T ss_pred C-CCCeEEEEecCCCC-----CCCccccccccccCCcceEEEEEEEECHHHHHHHHhC-C-CChhhhH-HHHHHHHHHHC
Confidence 8 78999999998731 1111110000000124678999999999999988753 2 1111100 01111 1135
Q ss_pred cCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 252 DCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 252 g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
|.+|+++...+. +|.+|++|++|..+.+
T Consensus 234 G~~I~~~~~~~~-~~~~IdtpeDl~~a~~ 261 (264)
T 3k8d_A 234 GEKIHVAVAQEV-PGTGVDTPEDLERVRA 261 (264)
T ss_dssp TCCEEEEECSCC-CSCCCCSHHHHHHHHH
T ss_pred CCceEEEEeCCC-CCCCCCCHHHHHHHHH
Confidence 889999987755 8999999999998865
No 32
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.79 E-value=8.1e-19 Score=172.66 Aligned_cols=210 Identities=16% Similarity=0.143 Sum_probs=132.1
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
..|.|||||||.|+||+|+ ||+|+|++|+|||+|+++.|..+ +++|+|++ +..+++.+++.. .|+ .++.++.
T Consensus 17 ~~~~~iIlA~G~g~R~~~~--~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~-~~~---~~~~~v~ 88 (232)
T 2xme_A 17 KLMKAVILAAGLGTRLGGV--PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLK-DKG---FNYKIVR 88 (232)
T ss_dssp CCEEEEEEECC------CC--CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHT-TSC---CCEEEEE
T ss_pred ccceEEEECCcCcCcCCCC--CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHH-hcC---CcEEEEE
Confidence 3589999999999999985 99999999999999999999988 99999999 767778777643 343 4577776
Q ss_pred CCCC-cchhhhhhcccccCCccCCEEEEeCCeeccccH-HHHHHHHHHHhcCCCCceEEEEeecc--CCCCCCCCcceEE
Q psy1482 96 SDGC-YSFGDVMRDLDGKAVIRNDFILVSGDVVSNINL-LSALKSFKKINSMDSGAVALVLYKKK--GQSKSSWKEDLIV 171 (627)
Q Consensus 96 ~~~~-~~~gdalr~l~~~~~i~~dfll~~gD~i~~~~l-~~~l~~h~~~~~~~~~~~~T~~~~~~--~~~~~~~~~~~vv 171 (627)
++.. .|++++++ .+...++++|++++||+..+.++ ..+++ . .. +++.... .+... ..++
T Consensus 89 ~~~~~~g~~~~i~--~a~~~~~~~~lv~~~D~p~~~~~~~~l~~----~------~~-~~~~~~~~~~~~~~----~~~v 151 (232)
T 2xme_A 89 HDRPEKGNGYSLL--VAKNHVEDRFILTMGDHVYSQQFIEKAVR----G------EG-VIADREPRFVDIGE----ATKI 151 (232)
T ss_dssp CSCGGGCHHHHHH--TTGGGCCSSEEEEETTEEECHHHHHHHTT----C------CE-EEEESSCSSSCTTT----SCEE
T ss_pred CCCCCCCcHHHHH--HHHHHCCCCEEEEcCCcccCHHHHHHHHh----C------CC-cEEEccccccCCCc----ceEE
Confidence 5544 68888887 34444567899999999875443 22222 1 11 2222211 11122 2355
Q ss_pred EEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhcccccChhcc
Q psy1482 172 AYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLINEEIL 251 (627)
Q Consensus 172 ~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~~~~~~ 251 (627)
..+ +|++..+.+++. +++++++|+|+++|+++..+.+... + .+..++.++..
T Consensus 152 ~~~--~g~v~~~~~~~~--------------------~~~~~~~g~~~~~~~~~~~l~~~~~-~-g~~~l~~ll~~---- 203 (232)
T 2xme_A 152 RVE--DGRVAKIGKDLR--------------------EFDCVDTGFFVLDDSIFEHAEKLRD-R-EEIPLSEIVKL---- 203 (232)
T ss_dssp EEE--TTEEEEEETTCS--------------------SCSEEEEEEEEECTTHHHHHGGGTT-S-SCCCHHHHHHH----
T ss_pred EEc--CCEEEEeecCCC--------------------CcceEEEEEEEECHHHHHHHHHHHh-c-ChhHHHHHHHc----
Confidence 565 689998887652 3356789999999999987766421 1 11112233321
Q ss_pred cCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 252 DCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 252 g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
.++.++.++++ +|.+|++|++|..+.+
T Consensus 204 -~~v~~~~~~~~-~~~dI~tpeDl~~a~~ 230 (232)
T 2xme_A 204 -ARLPVTYVDGE-LWMDVDTKEDVRRANR 230 (232)
T ss_dssp -HTCBEEECCSC-CEEEEECC--------
T ss_pred -CCEEEEEECCC-CEEeCCCHHHHHHHHh
Confidence 24666677656 8999999999987654
No 33
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.78 E-value=1.8e-18 Score=184.43 Aligned_cols=239 Identities=11% Similarity=0.058 Sum_probs=164.5
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccC-CeehHHHHHHHHHhC----CCc-EEEEEec-CChHHHHHHHHhcccccCC
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLV-NKCLLEYTLEHLHLS----GIE-EIIVFCT-SHVNQIRELVKRKEKSLVG 88 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~-g~pli~~~l~~L~~~----gi~-~i~vv~~-~~~~~i~~~l~~~~~~~~~ 88 (627)
..|.+||||||.||||.. ..||+|+||. |+|+|+++++.+.+. |+. .++|.++ +..+++++|+++..+ .+
T Consensus 78 ~k~~vviLAGGlGTRLg~-~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~--fG 154 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMGC-TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTN--SN 154 (469)
T ss_dssp TTEEEEEEECCBSGGGTC-CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTT--SS
T ss_pred ccceEEEEcCCccccCCC-CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhccc--CC
Confidence 568999999999999974 8999999999 999999999999887 633 4555555 468999999987433 23
Q ss_pred eeEEEEeCC------------------------CCcchhhhhhcccccC----Cc---cCCEEEEeCCeeccccHHHHHH
Q psy1482 89 TLITLIVSD------------------------GCYSFGDVMRDLDGKA----VI---RNDFILVSGDVVSNINLLSALK 137 (627)
Q Consensus 89 ~~v~~i~~~------------------------~~~~~gdalr~l~~~~----~i---~~dfll~~gD~i~~~~l~~~l~ 137 (627)
++|.++.|. .+.|+|++++.+.... ++ .+.|+|.++|.++......++.
T Consensus 155 ~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll~ 234 (469)
T 2icy_A 155 VDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILK 234 (469)
T ss_dssp SCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHHH
T ss_pred ceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHHH
Confidence 778876552 5689999988653222 22 3679999999998765457889
Q ss_pred HHHHHhcCCCCceEEEEeeccCCC-CCCCCcceEEEEECCCCe--EEEeeCCCCCCCccccchhhhccCCcEEEEecCCc
Q psy1482 138 SFKKINSMDSGAVALVLYKKKGQS-KSSWKEDLIVAYECDSKK--LLMHQTPQDNQKKVNIPMENILLYSKLEICAHLAS 214 (627)
Q Consensus 138 ~h~~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~vv~~d~~~~~--vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (627)
+|.++ ++.+||.+.+...+ .++| ++... +|+ ++.|.++|.. ..+-|+.. ...++.+
T Consensus 235 ~~~~~-----~a~~t~~v~~k~~~~~~~G----vl~~~--dg~~~vvE~~e~p~~------~~~e~k~~----~~~~~~N 293 (469)
T 2icy_A 235 HLIQN-----KNEYCMEVTPKTLADVKGG----TLISY--EGKVQLLEIAQVPDE------HVNEFKSI----EKFKIFN 293 (469)
T ss_dssp HHHHH-----TCSEEEEEEECCTTCCSSC----EEEEE--TTEEEEECGGGSCGG------GHHHHHSS----SSCCEEE
T ss_pred HHHHc-----CCCeeEEEEEeccCCCcee----EEEEE--CCEEEEEEEeccChh------hhhhhccc----cccceee
Confidence 99887 68889888776654 4676 66653 444 6667676530 00011110 1345679
Q ss_pred ceeeecCCchhhhhhcCCC--CCc--------------hhhhhcccccChhcccCeeEEEEcCCCceeeecCChhhHHHH
Q psy1482 215 TGIMICSPAVPPLFSDNFD--FQT--------------QEHFIKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIA 278 (627)
Q Consensus 215 ~Giyi~s~~vl~~~~~~fd--~~~--------------~~dfi~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a 278 (627)
+|+|+|+++++..+.++.. ... -+-|+.+++. .-....++.++.. +|..|.+..+++.+
T Consensus 294 ~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~----~~~~~~~~~V~R~-~F~PvKn~~dll~~ 368 (469)
T 2icy_A 294 TNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIR----FFDNAIGVNVPRS-RFLPVKASSDLLLV 368 (469)
T ss_dssp EEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGG----GSTTCEEEECCGG-GCCBCCSHHHHHHH
T ss_pred EEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHH----hcCCeEEEEechh-HcCcCCCHHHHHHH
Confidence 9999999999987765421 110 0011111111 1124567778766 89999999998888
Q ss_pred hHHHh
Q psy1482 279 SRDIV 283 (627)
Q Consensus 279 ~~dil 283 (627)
..++.
T Consensus 369 ~s~l~ 373 (469)
T 2icy_A 369 QSDLY 373 (469)
T ss_dssp HSTTE
T ss_pred HHHHH
Confidence 87743
No 34
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.78 E-value=2.7e-18 Score=169.04 Aligned_cols=222 Identities=16% Similarity=0.074 Sum_probs=149.9
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
+.|||||+|.|+||+ ||+|+|++|+|||+|+++.|..+ +++|+|++++ +++.++++.. .++.+..++
T Consensus 3 ~~aiIlA~G~g~R~~----~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~~------~~~~~~~~~ 69 (234)
T 2y6p_A 3 RAVIIPARLGSTRLK----EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS--ERVKEVVEDL------CEVFLTPSD 69 (234)
T ss_dssp EEEEEECCSCCTTTT----TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTTT------SEEEECCTT
T ss_pred eEEEEEcCCCCCCCC----CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHhc------eEEEECCcc
Confidence 689999999999997 79999999999999999999999 9999999976 6788887641 234332234
Q ss_pred CCcchhhhhhcccccCCccCCEEEEeCCe-ecc-ccHHHHHHHHHHHhcCCCCceEEEEeecc---CCCCCCCCcceEEE
Q psy1482 98 GCYSFGDVMRDLDGKAVIRNDFILVSGDV-VSN-INLLSALKSFKKINSMDSGAVALVLYKKK---GQSKSSWKEDLIVA 172 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~i~~dfll~~gD~-i~~-~~l~~~l~~h~~~~~~~~~~~~T~~~~~~---~~~~~~~~~~~vv~ 172 (627)
...|++.++..+ +.+-.+.|++++||. +.+ .++..+++.|++. ++.+|++.... ..+..+ .+.
T Consensus 70 ~~~g~~~~~~~~--~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~ 137 (234)
T 2y6p_A 70 LPSGSDRVLYVV--RDLDVDLIINYQGDEPFVYEEDIKLIFRELEKG-----ERVVTLARKDKEAYERPEDV-----KVV 137 (234)
T ss_dssp CCSHHHHHHHHH--TTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHT-----CSEEEEEEECSGGGGCTTSC-----EEE
T ss_pred cccchHHHHHHH--HhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhC-----CCeEEEecCCHHHhcCCCce-----EEE
Confidence 457777776432 222134589999999 766 6899999988764 24566665521 112222 234
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCC-chhhhhcccccChhcc
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ-TQEHFIKGVLINEEIL 251 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~-~~~dfi~~il~~~~~~ 251 (627)
.+ ++|+++.+.+++... +.+- .. ...+.++|+|+|+++++..+....... ...|++.. + .....
T Consensus 138 ~~-~~g~v~~~~e~~~~~-----~~~~----~~---~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~-~-~~~~~ 202 (234)
T 2y6p_A 138 LD-REGYALYFSRSPIPY-----FRKN----DT---FYPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQ-L-RLLEN 202 (234)
T ss_dssp EC-TTSBEEEEESSCCSC-----CSSC----CS---SCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTH-H-HHHHT
T ss_pred Ec-CCCCEeeeecCCCCc-----cccc----cc---ceeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHH-H-HHHHC
Confidence 46 679999998876310 0000 00 023568999999999887655421110 12222221 1 11124
Q ss_pred cCeeEEEEcCCCceeeecCChhhHHHHhHH
Q psy1482 252 DCRLYCSVVDDIEYGISVKDWPSYQIASRD 281 (627)
Q Consensus 252 g~~I~~~~~~~~~~~~~V~s~~~y~~a~~d 281 (627)
|.+++++..+ + +|.+|+++++|..++..
T Consensus 203 g~~v~~~~~~-~-~~~dI~t~~dl~~a~~~ 230 (234)
T 2y6p_A 203 GIKIKVLITE-N-YYHGVDTEEDLKIVEEK 230 (234)
T ss_dssp TCCCEEEECC-S-CCCCCCSHHHHHHHHHH
T ss_pred CCeEEEEEeC-C-cccCCCCHHHHHHHHHH
Confidence 8899999998 7 99999999999988763
No 35
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.75 E-value=7.6e-18 Score=167.14 Aligned_cols=235 Identities=10% Similarity=0.007 Sum_probs=152.3
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHH-HHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTL-EHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l-~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
+.|||||+|.|+||. +|+|+||+|+|||+|++ +.+..+|+++|+|+++ .+.+.+++.. ++ .++.+..+
T Consensus 2 ~~aiIlA~G~stR~~----~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~--~g---~~v~~~~~ 70 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP----GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATD--DERIAEICRA--EG---VDVVLTSA 70 (253)
T ss_dssp EEEEEECCSCCTTST----TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHT--TT---CCEEECCT
T ss_pred eEEEEEeCCCCCCCC----CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHH--cC---CeEEEeCC
Confidence 469999999999996 59999999999999999 9999889999999996 3778888764 32 44444334
Q ss_pred CCCcchh---hhhhcccccCCccCCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeec-----cCCCCCCCC
Q psy1482 97 DGCYSFG---DVMRDLDGKAVIRNDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKK-----KGQSKSSWK 166 (627)
Q Consensus 97 ~~~~~~g---dalr~l~~~~~i~~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~-----~~~~~~~~~ 166 (627)
+...|++ .|+..+.. .-.+.|+++.||. +....+..+++.|++.. ..+.+|++..- ..+++.++
T Consensus 71 ~~~~Gt~~i~~a~~~~~~--~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~---~~~~at~~~~~~~~~~~~~p~~~k- 144 (253)
T 4fcu_A 71 DHPSGTDRLSEVARIKGW--DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP---NCSMSTLCEPIHALDEFQRDSIVK- 144 (253)
T ss_dssp TCCCHHHHHHHHHHHHTC--CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCT---TCSEEEEEEECCCHHHHHCTTSCE-
T ss_pred CCCChHHHHHHHHHhcCc--CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCC---CCCEEEEeEEcCCHHHccCCCccE-
Confidence 4555653 23332110 0124589999998 34567899999887641 12456665541 22333343
Q ss_pred cceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhccccc
Q psy1482 167 EDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLI 246 (627)
Q Consensus 167 ~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~ 246 (627)
|++| ++|++++|.+++-+. +++.+...........+.++|+|+|++++|..|... . ++.-. ....+.
T Consensus 145 ----vv~d-~~g~~l~fsr~~ip~-----~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~-~-~~~le-~~e~le 211 (253)
T 4fcu_A 145 ----VVMS-KQNEALYFSRATIPY-----DRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTW-E-MGKLE-KLESLE 211 (253)
T ss_dssp ----EEEC-TTSBEEEEESSCCSC-----CTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTS-C-CCHHH-HHHTCT
T ss_pred ----EEEC-CCCeEEEecCCCCCC-----CCCcccccccccccceeEEEEEEEeCHHHHHHHHhC-C-CCccc-chhHHH
Confidence 5677 789999999876310 011000000000023466899999999999988743 1 11110 111121
Q ss_pred Ch--hcccCeeEEEEcCCCce-eeecCChhhHHHHhHHHhh
Q psy1482 247 NE--EILDCRLYCSVVDDIEY-GISVKDWPSYQIASRDIVQ 284 (627)
Q Consensus 247 ~~--~~~g~~I~~~~~~~~~~-~~~V~s~~~y~~a~~dil~ 284 (627)
.. ...|.+|+++..+ + + |.+|++|++|..+.+.+-+
T Consensus 212 ~lr~l~~G~~I~~~~~~-~-~~~~~IdtpeDL~~a~~~l~~ 250 (253)
T 4fcu_A 212 QLRVLENGHRIAIAVAE-A-NLPPGVDTQADLDRLNNMPVE 250 (253)
T ss_dssp THHHHHTTCCEEEEECS-S-CCCCCCCSHHHHHHHHTSCGG
T ss_pred HHHHHHCCCceEEEEeC-C-CCCCCCCCHHHHHHHHHHHHh
Confidence 11 1358999999997 5 7 9999999999998764433
No 36
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.72 E-value=1.3e-16 Score=158.10 Aligned_cols=226 Identities=13% Similarity=0.072 Sum_probs=147.3
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCC-cEEEEEecCChHHHHHHHHhcccccCCeeEEEEe-
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGI-EEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV- 95 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi-~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~- 95 (627)
+.|||||+|.|+|| | ||+|+|++|+|||+|+++.+..+|+ ++|+|++++ +++.+++.. ++ + .++.
T Consensus 3 ~~aiIlA~G~~~R~-~---~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~--~~---~--~~~~~ 69 (245)
T 1h7e_A 3 AVIVIPARYGSSRL-P---GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA--FG---G--KAIMT 69 (245)
T ss_dssp EEEEEECCSCCSSS-T---TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH--TT---C--EEEEC
T ss_pred eEEEEEcCCcCCCC-C---CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH--cC---C--eEEeC
Confidence 68999999999999 5 8999999999999999999999996 999999975 778888865 22 3 3444
Q ss_pred -CCCCcchhhhhhcccccCCccCCEEEEeCCee--ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCC--CCCCCcceE
Q psy1482 96 -SDGCYSFGDVMRDLDGKAVIRNDFILVSGDVV--SNINLLSALKSFKKINSMDSGAVALVLYKKKGQS--KSSWKEDLI 170 (627)
Q Consensus 96 -~~~~~~~gdalr~l~~~~~i~~dfll~~gD~i--~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~--~~~~~~~~v 170 (627)
++...+++.++..+. .+-.+.|++++||.. ....+..+++.|+... ++.+++++.+..+. ..++ ...
T Consensus 70 ~~~~~~g~~~~~~~~~--~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~ 141 (245)
T 1h7e_A 70 RNDHESGTDRLVEVMH--KVEADIYINLQGDEPMIRPRDVETLLQGMRDDP----ALPVATLCHAISAAEAAEPS--TVK 141 (245)
T ss_dssp CSCCSSHHHHHHHHHH--HSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCT----TCCEEEEEEEECHHHHTCTT--SCE
T ss_pred CCccCCcHHHHHHHHH--hCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhCC----CCCEEEEeecCCHHHhcCCC--CcE
Confidence 345567777765332 221245888999984 4567899999887531 24455544443110 0111 112
Q ss_pred EEEECCCCeEEEeeCCCCC-CCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhcccccChh
Q psy1482 171 VAYECDSKKLLMHQTPQDN-QKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLINEE 249 (627)
Q Consensus 171 v~~d~~~~~vl~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~~~~ 249 (627)
+..+ ++|+++.+.+++.. .+. ..+ ...+.++|+|+|+++++..+.. .. ... -.+.+.+....
T Consensus 142 ~~~~-~~g~~~~~~~~~~~~~r~-~~~------------~~~~~~~g~y~~~~~~l~~~~~-~~-~~~-~~~td~~~~~~ 204 (245)
T 1h7e_A 142 VVVN-TRQDALYFSRSPIPYPRN-AEK------------ARYLKHVGIYAYRRDVLQNYSQ-LP-ESM-PEQAESLEQLR 204 (245)
T ss_dssp EEEC-TTCBEEEEESSCSSCCTT-GGG------------CCEEEEEEEEEEEHHHHHHGGG-SC-CCH-HHHHHTCTTHH
T ss_pred EEEC-CCCcEEEeecCCCCCCcc-ccc------------CceeEEEEEEEcCHHHHHHHHh-CC-CCc-cccchhhHHHH
Confidence 2234 67889988875421 000 000 1135689999999998754332 11 111 11112222211
Q ss_pred --cccCeeEEEEcCCCceeeecCChhhHHHHhHHHh
Q psy1482 250 --ILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIV 283 (627)
Q Consensus 250 --~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil 283 (627)
..|.+++++..+ + +|.+|+++++|..+...+.
T Consensus 205 ~~~~g~~v~~~~~~-~-~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 205 LMNAGINIRTFEVA-A-TGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp HHHTTCCEEEEECC-C-CCCCSSSHHHHHHHHHHHH
T ss_pred HHHCCCeEEEEEeC-C-CCCCCCCHHHHHHHHHHHH
Confidence 238899999998 6 9999999999998876543
No 37
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.72 E-value=1.9e-16 Score=158.75 Aligned_cols=238 Identities=10% Similarity=0.076 Sum_probs=150.0
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC-
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS- 96 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~- 96 (627)
+.|||||+|.|+||. +|+|+|++|+|||+|+++.|..+|+++|+|++++ +.+.+++.. ++ +.+ +..
T Consensus 3 ~~aiIlA~G~g~R~~----~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~--~~---~~~--~~~~ 69 (262)
T 1vic_A 3 FTVIIPARFASSRLP----GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKS--FG---AEV--CMTS 69 (262)
T ss_dssp CEEEEECCCCCSSST----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH--TT---CEE--EECC
T ss_pred cEEEEEcCCCCCCCC----CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh--cC---CEE--EECC
Confidence 689999999999994 5999999999999999999999999999999875 567777765 22 333 433
Q ss_pred -CCCcchhhhhhcccccCCcc-CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC-CcceEE
Q psy1482 97 -DGCYSFGDVMRDLDGKAVIR-NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW-KEDLIV 171 (627)
Q Consensus 97 -~~~~~~gdalr~l~~~~~i~-~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~-~~~~vv 171 (627)
....|++.+...+....... +.|++++||. +...++..+++.|.+. ++.+++++.+...+.... +....+
T Consensus 70 ~~~~~g~~~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (262)
T 1vic_A 70 VNHNSGTERLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKF-----NVNMASLAVKIHDAEELFNPNAVKV 144 (262)
T ss_dssp CSSCCHHHHHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHH-----TCSEEEEEEECCCHHHHTCTTSCEE
T ss_pred ccccCChHHHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhc-----CCCEEEEEEecCCHHHhcCCCceEE
Confidence 33455553222111111112 4488899998 4467899999998875 345555555544310000 011234
Q ss_pred EEECCCCeEEEeeCCCCCCCccccchhh--------hccCCcEEEEecCCcceeeecCCchhhhhhcCCCCC-chhhhhc
Q psy1482 172 AYECDSKKLLMHQTPQDNQKKVNIPMEN--------ILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ-TQEHFIK 242 (627)
Q Consensus 172 ~~d~~~~~vl~~~e~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~-~~~dfi~ 242 (627)
..+ ++|+++.+.+++-+ .+++- ....| ...+.++|+|+++++++..+....... ...+++.
T Consensus 145 ~~~-~~g~v~~f~~~~~~-----~~r~~~~~~~~~~~~~~p----~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e~~~ 214 (262)
T 1vic_A 145 LTD-KDGYVLYFSRSVIP-----YDRDQFMNLQDVQKVQLS----DAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLE 214 (262)
T ss_dssp EEC-TTSBEEEEESSCSS-----CCHHHHTTCSCGGGCCCC----TTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCT
T ss_pred EEC-CCCCEeeeecCCCC-----cCCccccccccccccccc----cceEEEEEEEEeeHHHHHHHHhCCCCchhhhhhHH
Confidence 446 67899988775410 00110 00111 124678999999999887654321100 0111111
Q ss_pred ccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhcc
Q psy1482 243 GVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQRW 286 (627)
Q Consensus 243 ~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~~ 286 (627)
.+ .....|.+|+++..+.+ +|.+|++|++|..+...+..+.
T Consensus 215 ~~--~~l~~g~~v~~~~~~~~-~~~dI~tpeDl~~a~~~l~~~~ 255 (262)
T 1vic_A 215 QL--RVLYNGERIHVELAKEV-PAVGVDTAEDLEKVRAILAANG 255 (262)
T ss_dssp TH--HHHHTTCCEEEEECSSC-CCCCCCSHHHHHHHHHHHHHTC
T ss_pred HH--HHHHCCCeEEEEEeCCC-CCCCCCCHHHHHHHHHHHHhcC
Confidence 10 01124889999999745 8999999999999888665443
No 38
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=99.71 E-value=9.2e-18 Score=173.82 Aligned_cols=127 Identities=14% Similarity=0.150 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc-CCCCCchhHHHHHHHHHhhHHHHHHHh
Q psy1482 469 YTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN-KPDMDMKSFHTHMMSKINYFLPLFKNY 547 (627)
Q Consensus 469 ~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~ 547 (627)
.+|++++|.+.++++.++++++.+||+.+.+++++.+++++++++|+|+.+. ... .. ...++.|++|.|+|++|
T Consensus 208 ~~ev~~~L~~~l~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~-~~----~~~~~~l~~~~pll~~~ 282 (339)
T 1ug3_A 208 SEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLVRALMTAVCYSAIIFET-PL----RVDVAVLKARAKLLQKY 282 (339)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHHTEECSS-SC----EECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHhcCChhhCChHHHHHHHHHHHHHHHHhcCC-ch----HHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999999853 211 11 23347899999999999
Q ss_pred hcCcHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhhcC
Q psy1482 548 IKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNKL 600 (627)
Q Consensus 548 ~~~~~~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~~ 600 (627)
+++.+.|+++|++||.+|+++..+.+.|..+++.|||.|||+||+|++||++.
T Consensus 283 ~~~~~~ql~~L~alQ~~~~~~~~~~~~l~~~~~~LYd~dVi~Eeail~W~~~~ 335 (339)
T 1ug3_A 283 LCDEQKELQALYALQALVVTLEQPPNLLRMFFDALYDEDVVKEDAFYSWESSK 335 (339)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHTTSSCHHHHHHHTC--
T ss_pred cCCcHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhCcchhhHHHHHHHHhcC
Confidence 99889999999999999999888889999999999999999999999999763
No 39
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.71 E-value=1.9e-16 Score=166.67 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=42.7
Q ss_pred EEEEeCCeeccc--cHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEEEEEC-CCCeEEEeeCCCCCCCcccc
Q psy1482 119 FILVSGDVVSNI--NLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIVAYEC-DSKKLLMHQTPQDNQKKVNI 195 (627)
Q Consensus 119 fll~~gD~i~~~--~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv~~d~-~~~~vl~~~e~~~~~~~~~~ 195 (627)
=|+-.||+++++ +|.+++++|. +|+.. .+....++ +..++. ..++| .|.++|. .
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~----------~tl~g--~~~~~~~G----v~~ld~a~~g~I-~F~ekPk------~ 69 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK----------VEFQG--NGATLLSG----VEEIEEAKTAHI-TFLDNEK------Y 69 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT----------CEEES--CTTCEECE----ECCTTTCCTTEE-EECCSSS------T
T ss_pred CcccCccccccCcCcHHHHHHhhC----------CEEEC--CCcceEEE----EeccccCCCCeE-EEEeCch------h
Confidence 456679999997 9999999885 24443 22333444 555553 24567 7878763 1
Q ss_pred chhhhccCCcEEEEecCCcceeeecCCchhh
Q psy1482 196 PMENILLYSKLEICAHLASTGIMICSPAVPP 226 (627)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~ 226 (627)
+. ...+..+|+|+|+++++.
T Consensus 70 ~~-----------~~~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 70 AK-----------HLKSSEAGAIIISRTQFQ 89 (374)
T ss_dssp HH-----------HHHTCCCSEEEEEHHHHH
T ss_pred hh-----------hhhcCCcEEEEeChhHhh
Confidence 11 125678999999998864
No 40
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.68 E-value=6.3e-17 Score=159.84 Aligned_cols=176 Identities=13% Similarity=0.152 Sum_probs=114.7
Q ss_pred hhhhhhcCCCCCchhhhhcccccChhc-ccCeeEEEEcCCCce----eeecCChhhHHHHhHHHhhcccCCCCCCceeec
Q psy1482 224 VPPLFSDNFDFQTQEHFIKGVLINEEI-LDCRLYCSVVDDIEY----GISVKDWPSYQIASRDIVQRWVHPFVPSYKYRR 298 (627)
Q Consensus 224 vl~~~~~~fd~~~~~dfi~~il~~~~~-~g~~I~~~~~~~~~~----~~~V~s~~~y~~a~~dil~~~~~~~~~~~~~~~ 298 (627)
+++++.+.........|+.+.+...++ ...++++|... + | |.++++ |+.+++.++...............
T Consensus 9 ~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~ 83 (240)
T 3r8y_A 9 IISFIQKSEKKTPVKVYIKGDLKEVTFPETVQAFVNKKS-G-VLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIP 83 (240)
T ss_dssp --------CCBCEEEEEEEECGGGCCCCTTSEEEECSSE-E-EEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSC
T ss_pred HHHHHHhcCCCCcEEEEEeccccccccCCcceEEEcCCC-e-EEEccHHHHHH---HHHhccceechhhhhhhhhhhccc
Confidence 444555432222234455555433222 34566666554 4 4 555554 777777666433211000000111
Q ss_pred CeEEECCCeEECCCCEEcCCcEECCCCEECCCcee-eeeEECCCCEECCCcEE-eceEECCCCEeCCCcEEee-------
Q psy1482 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-SHCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVRL------- 369 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I-~~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~~------- 369 (627)
...+.+.++.|++++.|++++.||++|.|+.++.| .+++||++|.|+.+|.| .+++||++|+|+.++.+.+
T Consensus 84 ~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~ 163 (240)
T 3r8y_A 84 MLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSA 163 (240)
T ss_dssp BCCCTTCSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTS
T ss_pred hhhccCCCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCC
Confidence 12234667888999999999999999999999999 48999999999999999 5899999999999999976
Q ss_pred --eeecCCcEECCCcEECCCCEECCCcEECCCcEECC
Q psy1482 370 --SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSG 404 (627)
Q Consensus 370 --~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~ 404 (627)
++||++|+||.++.|.++++||++++|+++++|..
T Consensus 164 ~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 164 KPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp CCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCcEECCCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 78888888888888877888888888777776643
No 41
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.67 E-value=5e-16 Score=147.72 Aligned_cols=115 Identities=20% Similarity=0.269 Sum_probs=104.0
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee----eeEECCCCEECCCcEEe------ceEECCCCEeCCC
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRLE------KSYLFDNVKIEDN 364 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I~------~s~i~~~v~Ig~~ 364 (627)
.+..+..++++++.|++++.|.+++.||++|.|+++|.|. +++||++|.|+++|.|. +++|++++.||.+
T Consensus 28 ~~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~ 107 (191)
T 3ixc_A 28 PYAGVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHS 107 (191)
T ss_dssp CBTTBCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTT
T ss_pred cccCCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCC
Confidence 4556678899999999999999999999999999999996 45999999999999996 8999999999999
Q ss_pred cEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 365 CEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 365 ~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+.|.+++||++|+||.++.|.++++||++++|+++++|.++..+.
T Consensus 108 ~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~ 152 (191)
T 3ixc_A 108 CILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVK 152 (191)
T ss_dssp CEECSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CEEECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCcCcC
Confidence 999999999999999999999889999999999888887766654
No 42
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.67 E-value=9.6e-16 Score=143.40 Aligned_cols=113 Identities=24% Similarity=0.318 Sum_probs=101.7
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeee----eEECCCCEECCCcEEe-----ceEECCCCEeCCCcEE
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH----CIIGRNCTIGSNVRLE-----KSYLFDNVKIEDNCEV 367 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~----s~Ig~~~~Ig~~~~I~-----~s~i~~~v~Ig~~~~i 367 (627)
......+++++.|++++.|.+++.||++|.|+++|.|.+ ++||++|.|+++|.|. +++|++++.|+.++.|
T Consensus 9 ~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i 88 (173)
T 1xhd_A 9 KEKKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVIL 88 (173)
T ss_dssp TTBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEE
T ss_pred CCCCCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEE
Confidence 445678999999999999999999999999999999974 8999999999999997 8999999999999999
Q ss_pred eeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 368 RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 368 ~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
.+++||++|+||.++.|.++++||+++.|+++++|.++..++
T Consensus 89 ~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~ 130 (173)
T 1xhd_A 89 HSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIP 130 (173)
T ss_dssp ESCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCCcEeC
Confidence 999999999999999998889999999988888777655443
No 43
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.66 E-value=1e-15 Score=145.93 Aligned_cols=112 Identities=16% Similarity=0.227 Sum_probs=91.0
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee----eeEECCCCEECCCcEEe-----------------ceEE
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRLE-----------------KSYL 355 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I~-----------------~s~i 355 (627)
...++.|++++.|+++|.|++++.||++|.|+++|.|. +++||++|.|+++|.|. .++|
T Consensus 9 ~~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~I 88 (194)
T 3tv0_A 9 TQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMII 88 (194)
T ss_dssp ---CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEE
T ss_pred cCCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEE
Confidence 45689999999999999999999999999999999995 57999999999999994 3689
Q ss_pred CCCCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 356 FDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 356 ~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
++++.|+.++.+.++.||++++|+.++.|.+++.||++++||++++|.+++.|
T Consensus 89 g~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~I 141 (194)
T 3tv0_A 89 GTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVI 141 (194)
T ss_dssp CSSCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEE
T ss_pred CCcceEecceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCCcEE
Confidence 99999999999987777777777777777777777776666666655444433
No 44
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.65 E-value=1.6e-15 Score=143.77 Aligned_cols=114 Identities=18% Similarity=0.229 Sum_probs=102.6
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee----eeEECCCCEECCCcEE------------eceEECCCC
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRL------------EKSYLFDNV 359 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I------------~~s~i~~~v 359 (627)
+......+++++.|++++.|.+++.||++|.|++++.|. +++||++|.|+++|.| .+++|++++
T Consensus 11 ~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~ 90 (187)
T 3r3r_A 11 YKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDV 90 (187)
T ss_dssp BTTBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSC
T ss_pred hcccCcccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCC
Confidence 444566889999999999999999999999999999996 3599999999999999 789999999
Q ss_pred EeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 360 KIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 360 ~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
.|+.+|.|.+++||++|+||.++.|.++++||++++||++++|.++..+.
T Consensus 91 ~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~ 140 (187)
T 3r3r_A 91 TVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLE 140 (187)
T ss_dssp EECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEC
T ss_pred EECCCCEEeCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcCcC
Confidence 99999999999999999999999998889999999999988887766554
No 45
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.64 E-value=2.1e-15 Score=141.12 Aligned_cols=114 Identities=19% Similarity=0.264 Sum_probs=101.6
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeee----eEECCCCEECCCcEEe-----ceEECCCCEeCCCcE
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH----CIIGRNCTIGSNVRLE-----KSYLFDNVKIEDNCE 366 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~----s~Ig~~~~Ig~~~~I~-----~s~i~~~v~Ig~~~~ 366 (627)
+......+++++.|++++.+.+++.||++|.|++++.|.+ ++||++|.|+++|.|. +++|++++.|+.+|.
T Consensus 6 ~~~~~~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~ 85 (173)
T 1v3w_A 6 INGKKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAM 85 (173)
T ss_dssp BTTBCCEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCE
T ss_pred cCCCCCEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCE
Confidence 3444567899999999999999999999999999999974 8999999999999996 599999999999999
Q ss_pred EeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 367 VRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 367 i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
|.+++||++|+||.++.|.++++||+++.||++++|.++..|+
T Consensus 86 i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~ 128 (173)
T 1v3w_A 86 VHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIP 128 (173)
T ss_dssp EESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEC
T ss_pred ECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEECCCcEeC
Confidence 9999999999999999999889999999999888877665543
No 46
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.4e-15 Score=161.34 Aligned_cols=191 Identities=10% Similarity=0.118 Sum_probs=134.5
Q ss_pred CCceEEEEEeCCCCCCCCcCCCCccccccC-CeehHHHHHHHHHhC----CCc-EEEEEec-CChHHHHHHHHhcccccC
Q psy1482 15 DEVLQAVIVTDTFNRNFFPVPEPYCLLPLV-NKCLLEYTLEHLHLS----GIE-EIIVFCT-SHVNQIRELVKRKEKSLV 87 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~-g~pli~~~l~~L~~~----gi~-~i~vv~~-~~~~~i~~~l~~~~~~~~ 87 (627)
...+.+||||||.||||+. ..||+|+||+ |+|||+|+++.+... |+. .++|+++ +..+++++|+++..+ .
T Consensus 90 ~~k~avViLAGG~GTRmgs-~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~--f 166 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMGC-VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA--N 166 (488)
T ss_dssp GGGEEEEEECCCBSGGGTC-CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS--S
T ss_pred cCCceEEEEcCCCcccCCC-CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc--c
Confidence 3567899999999999985 7899999999 999999999999876 533 3667677 678999999987432 2
Q ss_pred CeeEEEEeCC------------------------CCcchhhhhhccccc---CCc----cCCEEEEeCCeecc-ccHHHH
Q psy1482 88 GTLITLIVSD------------------------GCYSFGDVMRDLDGK---AVI----RNDFILVSGDVVSN-INLLSA 135 (627)
Q Consensus 88 ~~~v~~i~~~------------------------~~~~~gdalr~l~~~---~~i----~~dfll~~gD~i~~-~~l~~~ 135 (627)
+++|.++.|. .+.|+|++++.+.+. +.+ .+.++|++||++.. .++. +
T Consensus 167 g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~ 245 (488)
T 2i5k_A 167 RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-I 245 (488)
T ss_dssp SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-H
T ss_pred CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-H
Confidence 3678888666 678999999865432 212 36799999999876 4775 6
Q ss_pred HHHHHHHhcCCCCceEEEEeeccCCC-CCCCCcceEEEEECCCCe--EEEeeCCCCCCCccccchhhhccCCcEEEEecC
Q psy1482 136 LKSFKKINSMDSGAVALVLYKKKGQS-KSSWKEDLIVAYECDSKK--LLMHQTPQDNQKKVNIPMENILLYSKLEICAHL 212 (627)
Q Consensus 136 l~~h~~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~vv~~d~~~~~--vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (627)
+.+|... ++.+|+.+.+...+ .++| +++.+ +|+ |+.|.+.+... ...+...+ ....
T Consensus 246 L~~~~~~-----~a~~t~~v~~~~~p~~~yG----~Iv~~--dG~~~iVE~~e~~~e~------~~~~~~~~----~~~~ 304 (488)
T 2i5k_A 246 LNHMIET-----GAEYIMELTDKTRADVKGG----TLISY--DGQVRLLEVAQVPKEH------IDEFKNIR----KFTN 304 (488)
T ss_dssp HHHHHHS-----CCSEEEEEEECCGGGSSSC----EEEEE--TTEEEEECGGGSCTTS------HHHHTCTT----TCCE
T ss_pred HHHHHhc-----CCcEEEEEEEecCCCCcee----EEEEE--CCcEEEEEeccCCHHH------Hhhccccc----ccCE
Confidence 6878765 67888887776544 3476 66554 455 44454444210 00011111 2346
Q ss_pred CcceeeecCCchhhhhhc
Q psy1482 213 ASTGIMICSPAVPPLFSD 230 (627)
Q Consensus 213 ~~~Giyi~s~~vl~~~~~ 230 (627)
+|+|+|+|+.+++..+-+
T Consensus 305 ~Ntgi~~f~~~~L~~~l~ 322 (488)
T 2i5k_A 305 FNTNNLWINLKAVKRLIE 322 (488)
T ss_dssp EEEEEEEEEHHHHHHHHH
T ss_pred EEEEEEEEeHHHHHHHHh
Confidence 799999999988875433
No 47
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.63 E-value=3.2e-15 Score=141.95 Aligned_cols=114 Identities=19% Similarity=0.302 Sum_probs=100.2
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee----eeEECCCCEECCCcEEece------------EECCCC
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRLEKS------------YLFDNV 359 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I~~s------------~i~~~v 359 (627)
+......+++++.|++++.|.+++.||++|.|+++|.|. ++.||++|.|+++|.|..+ +|++++
T Consensus 15 ~~~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~ 94 (189)
T 3r1w_A 15 YQGISPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDV 94 (189)
T ss_dssp BTTBCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSE
T ss_pred ccCcCCEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCC
Confidence 333455789999999999999999999999999999995 3599999999999999654 999999
Q ss_pred EeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 360 KIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 360 ~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
.|+.+|.|.+++||++|+||.++.|.+++.||++++||++++|.++..+.
T Consensus 95 ~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~ 144 (189)
T 3r1w_A 95 TIGHQAMLHGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLE 144 (189)
T ss_dssp EECTTCEEESCEECSSEEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred EECCCCEEeCcEECCCcEECCCCEEcCCCEECCCCEEccCCEECCCCEeC
Confidence 99999999999999999999999998888888888888888877766554
No 48
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.59 E-value=4e-15 Score=146.37 Aligned_cols=217 Identities=12% Similarity=0.014 Sum_probs=122.0
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhC-CCcEEEEEecCCh-HHHHHHHHhcccccCCeeEEE
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLS-GIEEIIVFCTSHV-NQIRELVKRKEKSLVGTLITL 93 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~-gi~~i~vv~~~~~-~~i~~~l~~~~~~~~~~~v~~ 93 (627)
++|.|||||+|.|+||++-.+||+|+|++|+|||+|+++.|..+ ++++|+|++++.. +.+++++........ ..+.+
T Consensus 1 ~m~~~iIlA~G~g~R~~~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (236)
T 2vsh_A 1 HMIYAGILAGGTGTRMGISNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYK-ERIII 79 (236)
T ss_dssp CCEEEEEEEC-----------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGG-GGEEE
T ss_pred CceEEEEeCCccccccCCCCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhcccccc-CceEE
Confidence 46899999999999998645699999999999999999999998 5999999999765 778887765210000 12333
Q ss_pred EeCCCCcchhhhhhcccccCCc-------c-CCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCC
Q psy1482 94 IVSDGCYSFGDVMRDLDGKAVI-------R-NDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKS 163 (627)
Q Consensus 94 i~~~~~~~~gdalr~l~~~~~i-------~-~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~ 163 (627)
... ..+..++++. +...+ . +.+++++||. +...++..+++.|+.. ++ . +++.+...+
T Consensus 80 ~~~--~~~~~~~i~~--~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~-----~~-~-~~~~~~~~~-- 146 (236)
T 2vsh_A 80 TKG--GADRNTSIKN--IIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH-----DA-V-DTVVEAVDT-- 146 (236)
T ss_dssp EEC--CSSHHHHHHH--HHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS-----SE-E-EEEEECCSC--
T ss_pred ECC--CCchHHHHHH--HHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc-----Cc-E-EEEEecccc--
Confidence 321 1333444332 11112 2 3377788998 4556899999988764 23 2 233333211
Q ss_pred CCCcceEEEEECCCC-eEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhh-hhhcCCCCCchhhh-
Q psy1482 164 SWKEDLIVAYECDSK-KLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPP-LFSDNFDFQTQEHF- 240 (627)
Q Consensus 164 ~~~~~~vv~~d~~~~-~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~-~~~~~fd~~~~~df- 240 (627)
+..+ ++| ++..+.+++. + . . -.+.|+|+++.+. ++....+ +..+
T Consensus 147 -------~~~~-~~g~~~~~~~~~~~-----------------~--~--~-~~~p~~f~~~~l~~~~~~~~~---~g~~~ 193 (236)
T 2vsh_A 147 -------IVES-TNGQFITDIPNRAH-----------------L--Y--Q-GQTPQTFRCKDFMDLYGSLSD---EEKEI 193 (236)
T ss_dssp -------EEEC-SSSSBCCBCCCGGG-----------------E--E--E-EEEEEEEEHHHHHHHHHTCCH---HHHHH
T ss_pred -------EEEe-CCCCeeeeecChHH-----------------h--e--e-ecCCcEecHHHHHHHHHHHHh---cCCCc
Confidence 1123 456 6655544321 0 0 0 0136778777654 4443221 1111
Q ss_pred hcccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhHH
Q psy1482 241 IKGVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRD 281 (627)
Q Consensus 241 i~~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~d 281 (627)
+...+.-....|.+++.+..+ + +|.+|++|++|..+...
T Consensus 194 ~~~~~~~l~~~~~~v~~~~~~-~-~~~dIdtpeDl~~a~~~ 232 (236)
T 2vsh_A 194 LTDACKIFVIKGKDVALAKGE-Y-SNLKITTVTDLKIAKSM 232 (236)
T ss_dssp CCSHHHHHHHTTCCEEEEECC-T-TCCCCCSHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCEEEEECC-c-cccCcCCHHHHHHHHHH
Confidence 111100001246788888865 6 89999999999887663
No 49
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.58 E-value=1.8e-14 Score=137.22 Aligned_cols=108 Identities=19% Similarity=0.285 Sum_probs=73.7
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEEe----
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVR---- 368 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~---- 368 (627)
..+.++++|++++.|++++.|++++.||++|.|++++.|+ +++||++|.|+++|.| .++.|++++.||.++.+.
T Consensus 10 a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~ 89 (192)
T 3mqg_A 10 AIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYN 89 (192)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSS
T ss_pred cEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccC
Confidence 3455566666666666777777777777777777777776 4778888888888777 667777777777777663
Q ss_pred ------------eeeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 369 ------------LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 369 ------------~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
+++||++|+||.+++|.+|++||++++|+++++|
T Consensus 90 ~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV 135 (192)
T 3mqg_A 90 PRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVV 135 (192)
T ss_dssp CBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEE
Confidence 3566666666666666666666666666665543
No 50
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.58 E-value=5.3e-15 Score=144.86 Aligned_cols=208 Identities=14% Similarity=0.024 Sum_probs=129.9
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
+.|||||+|.|+||+ ||+|+|++|+|||+|+++.|..+| +++|+|++++ +.+.+++.. ++ ..+ +..+
T Consensus 5 ~~aiIlA~G~g~R~~----~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~--~~---~~~-~~~~ 72 (228)
T 1ezi_A 5 NIAVILARQNSKGLP----LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN--FG---VEV-VLRP 72 (228)
T ss_dssp EEEEEECCSSCSSST----TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH--TT---CEE-EECC
T ss_pred eEEEEecCCCCCCCC----CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH--cC---CEE-EeCc
Confidence 569999999999997 799999999999999999999988 7999999963 567777754 22 343 2222
Q ss_pred C----CCcchhhhhhcccccCCcc---CCEEEEeCCee--ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCc
Q psy1482 97 D----GCYSFGDVMRDLDGKAVIR---NDFILVSGDVV--SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKE 167 (627)
Q Consensus 97 ~----~~~~~gdalr~l~~~~~i~---~dfll~~gD~i--~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~ 167 (627)
. ...|++++++. +...+. +.++++.||.. ....+..+++.|+.. ++.+++.+.+.... .++
T Consensus 73 ~~~~~~~~g~~~sv~~--~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~-p~~-- 142 (228)
T 1ezi_A 73 AELASDTASSISGVIH--ALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEK-----IKGSVVSACPMEHH-PLK-- 142 (228)
T ss_dssp C------CHHHHHHHH--HHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTT-----TCCCEEEEEECSSC-TTS--
T ss_pred hHHcCCCCChHHHHHH--HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-----CCCEEEEEEecCCC-cce--
Confidence 2 33455666653 222222 35899999973 446788888776543 34445555554331 122
Q ss_pred ceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhcccccC
Q psy1482 168 DLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLIN 247 (627)
Q Consensus 168 ~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~~ 247 (627)
...++ ++|++..+.+... +......+ + .....+.|+|++++..+....
T Consensus 143 --~~~~~-~~g~~~~~~~~~~----~~~~~~~~---~----~~~~~~~giy~~~~~~l~~~~------------------ 190 (228)
T 1ezi_A 143 --TLLQI-NNGEYAPMRHLSD----LEQPRQQL---P----QAFRPNGAIYINDTASLIANN------------------ 190 (228)
T ss_dssp --CEEEC-C--CEEESSCHHH----HTCCGGGS---C----CEEEEEEEEEEEEHHHHHHHT------------------
T ss_pred --eeEEc-CCCcEeecccccc----ccCCcccC---c----hhheeeeEEEEEeHHHHhhCC------------------
Confidence 22235 5788887755110 00000000 0 111234789998877643311
Q ss_pred hhcccCeeEEEEcCCCceeeecCChhhHHHHhHH
Q psy1482 248 EEILDCRLYCSVVDDIEYGISVKDWPSYQIASRD 281 (627)
Q Consensus 248 ~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~d 281 (627)
...|.++..+..++. +|.+|++|++|..+...
T Consensus 191 -~~~g~~v~~~~~~~~-~~~dIdtpeDl~~a~~~ 222 (228)
T 1ezi_A 191 -CFFIAPTKLYIMSHQ-DSIDIDTELDLQQAENI 222 (228)
T ss_dssp -SSCCSSCEEEECCTG-GGCCCCSHHHHHHHHHH
T ss_pred -cccCCceEEEEeCcc-cccCCCCHHHHHHHHHH
Confidence 023667777887655 89999999999887654
No 51
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.57 E-value=2e-14 Score=138.27 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=81.4
Q ss_pred eEEECCCeEECCCCEEcC--CcEECCCCEECCCceee-eeEECCCCEECCCcEE----eceEECCCCEeCCCcEEee---
Q psy1482 300 NIYLAEDVLIGKTSVLKQ--QVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL----EKSYLFDNVKIEDNCEVRL--- 369 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~--~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I----~~s~i~~~v~Ig~~~~i~~--- 369 (627)
...+++++.|++++.|.+ ++.||++|.|+++|.|. +++||++|.|+++|.| ++++||++|.|+.+|.|..
T Consensus 32 ~~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~ 111 (205)
T 3vbi_A 32 FLSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAID 111 (205)
T ss_dssp CSEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEEC
T ss_pred CeEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCC
Confidence 456888888999999987 79999999999999996 7999999999999999 3499999999999999931
Q ss_pred -----------------eeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 370 -----------------SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 370 -----------------~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
.....+++||++++|+.+|+|.++++||+++.|+++++|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~ 168 (205)
T 3vbi_A 112 DFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVK 168 (205)
T ss_dssp CCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred CcccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEEC
Confidence 1113345555555555555555555555555555555554
No 52
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.57 E-value=2.7e-15 Score=153.58 Aligned_cols=139 Identities=13% Similarity=0.117 Sum_probs=104.4
Q ss_pred eeecCChhhHHHHhHHHhhcccCCCC---C-CceeecC-eEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECC
Q psy1482 266 GISVKDWPSYQIASRDIVQRWVHPFV---P-SYKYRRN-NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGR 340 (627)
Q Consensus 266 ~~~V~s~~~y~~a~~dil~~~~~~~~---~-~~~~~~~-~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~ 340 (627)
..||..+++|..+.++.+.+|.++-. . ...++.+ ++.+++++.|++++.|+++++||++|.||++|.|++++||+
T Consensus 26 l~ri~al~~f~~v~~g~lgg~i~~e~nl~~~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~ 105 (334)
T 2pig_A 26 LRQVIAVTDFNDVKAGTSGGWVDADNVLSQQGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISD 105 (334)
T ss_dssp EEEEEESSCBTTBCTTCEEEEESSTTSBCSSSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEES
T ss_pred EEEEEEeeccccccCCccCCeEeccCCcccCCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcC
Confidence 56888899999999999999986432 1 2456777 78888899999999999999999999999999999999999
Q ss_pred CCEECCCcEEeceEECCCCEeCCCcE----------------------------EeeeeecCCcEECCCcEECCCCEECC
Q psy1482 341 NCTIGSNVRLEKSYLFDNVKIEDNCE----------------------------VRLSVLSYNTGVGEHSKLLNGCLLGT 392 (627)
Q Consensus 341 ~~~Ig~~~~I~~s~i~~~v~Ig~~~~----------------------------i~~~ii~~~~~Ig~~~~i~~~~ii~~ 392 (627)
+|.|+++++|.+++|++++.|+.+++ |.+++|+.+|.|+.++.|+ +++|++
T Consensus 106 ~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~ 184 (334)
T 2pig_A 106 GARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEH 184 (334)
T ss_dssp SCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECT
T ss_pred CCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcC
Confidence 99999999998777666665554444 3345555555555555555 555666
Q ss_pred CcEECCCcEECCC
Q psy1482 393 GVLIGNKTCLSGV 405 (627)
Q Consensus 393 ~~~ig~~~~v~~~ 405 (627)
++.|++++.+.++
T Consensus 185 ~a~I~~~a~V~~~ 197 (334)
T 2pig_A 185 RAEVFDFALIEGD 197 (334)
T ss_dssp TCEECTTCEEECC
T ss_pred CCEECCCcEECCc
Confidence 6666666555443
No 53
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.57 E-value=2.4e-14 Score=144.75 Aligned_cols=55 Identities=25% Similarity=0.440 Sum_probs=27.9
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I 350 (627)
.+.+++.+++++.|+++|.|++++.||++|.|+++++|. +++||++|.|+++|.|
T Consensus 30 ~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 30 IIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp EECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEE
Confidence 344444444555555555555555555555555555553 4555555555555555
No 54
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.57 E-value=3.3e-14 Score=142.39 Aligned_cols=104 Identities=21% Similarity=0.296 Sum_probs=51.0
Q ss_pred cCeEEECCCeEECCCCEEcCCcEECCCCEECCCcee--------------eeeEECCCCEECCCcEEec--------eEE
Q psy1482 298 RNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL--------------SHCIIGRNCTIGSNVRLEK--------SYL 355 (627)
Q Consensus 298 ~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I--------------~~s~Ig~~~~Ig~~~~I~~--------s~i 355 (627)
.+++.||+++.|+++++|.+++.||++|.|++++.| .++.||++|.|+++|+|.. +.|
T Consensus 32 ~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~I 111 (266)
T 3r0s_A 32 SKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRI 111 (266)
T ss_dssp CTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEE
T ss_pred CCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEE
Confidence 334444444444444555455555555555555555 3455555555555555532 455
Q ss_pred CCCCEeCCCcEE-eeeeecCCcEECCCcEECCCCEECCCcEECCCcE
Q psy1482 356 FDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTC 401 (627)
Q Consensus 356 ~~~v~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~ 401 (627)
|+++.|+.++.| .+|.||++|+|+.++.+..+++||++++||.++.
T Consensus 112 G~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~ 158 (266)
T 3r0s_A 112 GDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTP 158 (266)
T ss_dssp CTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCE
Confidence 555555555555 2444444444444444443344444444444333
No 55
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.56 E-value=3.2e-14 Score=135.36 Aligned_cols=116 Identities=24% Similarity=0.338 Sum_probs=89.9
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEEe-eee
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVR-LSV 371 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~-~~i 371 (627)
.++++.+++++++.|++++.|+++++|+.++.||++|.|+ +++|+.++.||++|.| .++.|+++++||+++.|. +++
T Consensus 4 ~~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~ 83 (192)
T 3mqg_A 4 ATIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMV 83 (192)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCB
T ss_pred CEECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceE
Confidence 3556667777777777777777777777777777777774 6777777777777777 457777777777777775 344
Q ss_pred ec---------------CCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 372 LS---------------YNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 372 i~---------------~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
+. .+++||++++|+.+|+|.++++||+++.|+++++|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~ 137 (192)
T 3mqg_A 84 FTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNK 137 (192)
T ss_dssp CCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EecccCCccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECc
Confidence 43 4578999999999999999999999999999999975
No 56
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.56 E-value=4.3e-14 Score=142.92 Aligned_cols=116 Identities=17% Similarity=0.249 Sum_probs=90.0
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-------------eeEECCCCEECCCcEEec--------
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-------------HCIIGRNCTIGSNVRLEK-------- 352 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-------------~s~Ig~~~~Ig~~~~I~~-------- 352 (627)
+..+.++++||+++.|+++++|.+++.||++|.|+++|.|+ +++||++|.|+++|+|..
T Consensus 46 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~ 125 (283)
T 4eqy_A 46 YAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGV 125 (283)
T ss_dssp TCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSE
T ss_pred CCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCc
Confidence 45666777788888888888888889999999999999993 789999999999999964
Q ss_pred eEECCCCEeCCCcEE-eeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 353 SYLFDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 353 s~i~~~v~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+.||+++.|+.++.| .+|+||++|+|+.++.+..+++||+++.||.++.|.+++.|+
T Consensus 126 ~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig 183 (283)
T 4eqy_A 126 TTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIG 183 (283)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEEC
Confidence 899999999988888 577777777777776666566666666666655555444443
No 57
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.56 E-value=5.5e-14 Score=136.04 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=75.3
Q ss_pred eEEECCCeEECCCCEEcCCcEECCCCEECCCceee-----eeEECCCCEECCCcEEec---------------eEECCCC
Q psy1482 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRLEK---------------SYLFDNV 359 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~---------------s~i~~~v 359 (627)
...+++++.|++++.|.+++.||++|.|+++|.|. +++||++|.|+++|.|.. ++|++++
T Consensus 39 ~~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v 118 (213)
T 3kwd_A 39 EPEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNV 118 (213)
T ss_dssp CCEECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTC
T ss_pred CCcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCc
Confidence 34677777788888887788888888888888874 368888888888888853 7788888
Q ss_pred EeCCCcEEee-eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 360 KIEDNCEVRL-SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 360 ~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
.|+.+|.|.+ ++||++|+||.++.|. +++||++++||++++|
T Consensus 119 ~Ig~~~~I~~~v~Ig~~v~IG~~a~I~-~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 119 SITHMALIHGPAYIGDGCFIGFRSTVF-NARVGAGCVVMMHVLI 161 (213)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEE
T ss_pred EECCCcEEcCCCEECCCCEECCCCEEe-CcEECCCCEEcCCCEE
Confidence 8888888865 7788888888877765 3556666666555555
No 58
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.56 E-value=2.2e-14 Score=152.89 Aligned_cols=117 Identities=16% Similarity=0.194 Sum_probs=100.5
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEee----
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRL---- 369 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~---- 369 (627)
...+.++++||+++.|++++.|++++.||++|.||++|.|++++||++|.|++++.|.+++||+++.||.++.|.+
T Consensus 256 ~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~ 335 (401)
T 2ggo_A 256 GTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFD 335 (401)
T ss_dssp TCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTT
T ss_pred CCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccC
Confidence 4456678899999999999999999999999999999999999999999999999999999999999999999962
Q ss_pred -----eeecC----------CcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 370 -----SVLSY----------NTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 370 -----~ii~~----------~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
+.+++ +++||++++|+.+|+|.++++||++++|+++++|..
T Consensus 336 ~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~ 391 (401)
T 2ggo_A 336 EKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNR 391 (401)
T ss_dssp CSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCCCeEcc
Confidence 33332 677888888888888888888888888888887765
No 59
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.56 E-value=5.6e-14 Score=140.73 Aligned_cols=109 Identities=17% Similarity=0.278 Sum_probs=88.8
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE--------------eceEECCC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL--------------EKSYLFDN 358 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I--------------~~s~i~~~ 358 (627)
..++.+++.+++++.|+++|.|++++.||++|.|++++.|. ++.||++|.|++++.| .++.||++
T Consensus 10 ~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~ 89 (266)
T 3r0s_A 10 SAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKN 89 (266)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTT
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCC
Confidence 45677888889999999999999999999999999999997 7999999999999999 58999999
Q ss_pred CEeCCCcEEee--------eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 359 VKIEDNCEVRL--------SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 359 v~Ig~~~~i~~--------~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
+.|+++|.|.. +.||+++.|+.++.|..+|+||+++.++.++.+
T Consensus 90 ~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i 141 (266)
T 3r0s_A 90 ATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATL 141 (266)
T ss_dssp CEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CEECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCcee
Confidence 99999999963 777777777766666555555555444444433
No 60
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.55 E-value=5.3e-14 Score=140.94 Aligned_cols=108 Identities=12% Similarity=0.137 Sum_probs=57.8
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCcee-------------eeeEECCCCEECCCcEEe--------ce
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-------------SHCIIGRNCTIGSNVRLE--------KS 353 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I-------------~~s~Ig~~~~Ig~~~~I~--------~s 353 (627)
.++.+++.|++++.|+++++|.+++.||++|.|++++.| .++.||++|.|+++|+|. .+
T Consensus 32 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~ 111 (265)
T 4e6u_A 32 CIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALT 111 (265)
T ss_dssp CEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEE
T ss_pred eEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCce
Confidence 344445555555555555555555666666666666666 245666666666666664 35
Q ss_pred EECCCCEeCCCcEE-eeeeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 354 YLFDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 354 ~i~~~v~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
.|++++.|+.++.| .+|+||++|+|+.++.+..+++||+++.||.++.|
T Consensus 112 ~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V 161 (265)
T 4e6u_A 112 KIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGI 161 (265)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEE
Confidence 66666665555555 34555555444444444434444444444444333
No 61
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.55 E-value=4.9e-14 Score=140.63 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=52.4
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCcee--------------eeeEECCCCEECCCcEEe-------ce
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL--------------SHCIIGRNCTIGSNVRLE-------KS 353 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I--------------~~s~Ig~~~~Ig~~~~I~-------~s 353 (627)
.++.+++.||+++.|++++.|.+++.||++|.|+++|.| .+++||++|.|+++|.|. .+
T Consensus 25 ~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~ 104 (259)
T 3hsq_A 25 SIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPT 104 (259)
T ss_dssp CEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCE
T ss_pred CEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcE
Confidence 344445555555555555666555666666666666666 245666666666666664 45
Q ss_pred EECCCCEeCCCcEEe-eeeecCCcEECCCcEECCCCEECCCc
Q psy1482 354 YLFDNVKIEDNCEVR-LSVLSYNTGVGEHSKLLNGCLLGTGV 394 (627)
Q Consensus 354 ~i~~~v~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~ii~~~~ 394 (627)
.|++++.|+.+++|. +|.||++++|+.++.+..++.||+++
T Consensus 105 ~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~ 146 (259)
T 3hsq_A 105 VIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFA 146 (259)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSC
T ss_pred EECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCc
Confidence 555555555555542 34444444433333333333333333
No 62
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.55 E-value=6.5e-14 Score=140.38 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=49.5
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-------------eceEECCCCE
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-------------EKSYLFDNVK 360 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-------------~~s~i~~~v~ 360 (627)
.++.+++.+++++.|+++|.|++++.||++|.|+++|+|. ++.||++|.|+++|.| .+++||+++.
T Consensus 8 a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~ 87 (270)
T 1j2z_A 8 AIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNL 87 (270)
T ss_dssp CEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCE
Confidence 4455566666777777777777777777777777777775 6777777777777777 3456666666
Q ss_pred eCCCcEEe
Q psy1482 361 IEDNCEVR 368 (627)
Q Consensus 361 Ig~~~~i~ 368 (627)
|+++|.|.
T Consensus 88 I~~~~~I~ 95 (270)
T 1j2z_A 88 IREFCMIN 95 (270)
T ss_dssp ECTTCEEC
T ss_pred ECCCeEEc
Confidence 66665553
No 63
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.54 E-value=8.2e-14 Score=140.29 Aligned_cols=115 Identities=21% Similarity=0.303 Sum_probs=88.0
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeee---------------eEECCCCEECCCcEE-eceEECC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH---------------CIIGRNCTIGSNVRL-EKSYLFD 357 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~---------------s~Ig~~~~Ig~~~~I-~~s~i~~ 357 (627)
...+.+++.|++++.|+++|+|++++.||++|.|+++|.|++ ++||++|.|+++|.| .++.|++
T Consensus 14 ~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~Ig~ 93 (273)
T 3fs8_A 14 GVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIGD 93 (273)
T ss_dssp TCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCEECT
T ss_pred CcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCEECC
Confidence 445666777778888888888888888888888888888864 889999999999999 6888999
Q ss_pred CCEeCCCcEEe-eeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 358 NVKIEDNCEVR-LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 358 ~v~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
++.||.++.|. ++.||+++.|+.++.|..+++||+++.|+.++.|..++.+
T Consensus 94 ~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~i 145 (273)
T 3fs8_A 94 NFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSII 145 (273)
T ss_dssp TCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEE
T ss_pred CCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCcee
Confidence 88888888884 7888887777777666656666666655555555544443
No 64
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.54 E-value=9.1e-16 Score=150.77 Aligned_cols=200 Identities=11% Similarity=0.071 Sum_probs=126.7
Q ss_pred eEEEEEeCCCCCCCCcC--CCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 18 LQAVIVTDTFNRNFFPV--PEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl--~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
|.|||||+|. +||++. ..||+|+|++|+|||+|+++.|..+|+ +|+|++.. +++++++ .+.+
T Consensus 3 ~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~----------~~~~-- 66 (232)
T 2dpw_A 3 PSAIVLAGGK-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP----------ALTL-- 66 (232)
T ss_dssp CEEEEECCCB-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC----------SEEE--
T ss_pred eeEEEECCCC-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc----------CeEe--
Confidence 7899999999 777776 489999999999999999999999999 88886543 4343322 2333
Q ss_pred CCCCcchhhhhhcccccCCccCCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCC-CCCCCcceEEE
Q psy1482 96 SDGCYSFGDVMRDLDGKAVIRNDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQS-KSSWKEDLIVA 172 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i~~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~vv~ 172 (627)
....|++++++. +...+.+.|++++||+ +....+..+++ | .. ++.+++...+.... .+++ .+
T Consensus 67 -~~~~g~~~~i~~--a~~~~~~~~lv~~~D~P~~~~~~i~~l~~-~-~~-----~~~~~~~~~~~~~~~~~~~----~~- 131 (232)
T 2dpw_A 67 -PDRGGLLENLEQ--ALEHVEGRVLVATGDIPHLTEEAVRFVLD-K-AP-----EAALVYPIVPKEAVEARFP----RT- 131 (232)
T ss_dssp -CCCSSHHHHHHH--HHHTCCSEEEEEETTCTTCCHHHHHHHHH-H-CC-----SCSEEEEEEEHHHHHHHCT----TC-
T ss_pred -cCCCCHHHHHHH--HHHHcCCCEEEEeCCcccCCHHHHHHHHh-c-CC-----CCCEEEEEeeccchhhhCC----Cc-
Confidence 456788888873 3333446799999999 55667888888 6 22 34555554432111 1122 10
Q ss_pred EECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCC--ch-------------
Q psy1482 173 YECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQ--TQ------------- 237 (627)
Q Consensus 173 ~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~--~~------------- 237 (627)
.+++..+.+++ ..++|+|+|++.++..+.+..... .+
T Consensus 132 ----~~~v~~~~ek~------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~~ 183 (232)
T 2dpw_A 132 ----KRTYARLREGT------------------------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWD 183 (232)
T ss_dssp ----CCCCEEETTEE------------------------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHHHCHH
T ss_pred ----ceeEEEEecCc------------------------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHHHCHH
Confidence 13455555532 157999999999877554311000 00
Q ss_pred -------hh-hhcccccCh-hcccCeeEEEEcCCCceeeecCChhhHH
Q psy1482 238 -------EH-FIKGVLINE-EILDCRLYCSVVDDIEYGISVKDWPSYQ 276 (627)
Q Consensus 238 -------~d-fi~~il~~~-~~~g~~I~~~~~~~~~~~~~V~s~~~y~ 276 (627)
.+ .+.+++... ...|.++..+..++...|.+|++|++|.
T Consensus 184 ~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 184 VLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 00 111222110 1246788888885422899999999873
No 65
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.54 E-value=6.7e-14 Score=136.37 Aligned_cols=207 Identities=12% Similarity=0.067 Sum_probs=129.1
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCCh-HHHHHHHHhcccccCCeeEEEEe
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHV-NQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~-~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
|.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|..+| +++|+|++++.. +.+.+++.. ..+.++.
T Consensus 3 ~~~vIlA~G~g~R~~~-~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-------~~v~~~~ 74 (223)
T 2xwl_A 3 TVAVVPAAGSGERLRA-GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-------EDSVIVS 74 (223)
T ss_dssp EEEEEECCCCCGGGTS-SSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCB-------TTEEEEE
T ss_pred eEEEEECCccCcccCC-CCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhcc-------CCeEEEc
Confidence 7899999999999973 57999999999999999999999988 999999999754 446655431 2355554
Q ss_pred CCCCcchhhhhhcccccCCc-cCC-EEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcceEE
Q psy1482 96 SDGCYSFGDVMRDLDGKAVI-RND-FILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKEDLIV 171 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i-~~d-fll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~vv 171 (627)
.. .+.+++++. +...+ ..+ ++++.||. +....+..+++.|. . +..+++.+.+...+ . .+
T Consensus 75 ~~--~~~~~~i~~--al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~-----~~~~~i~~~~~~d~--~-----~~ 137 (223)
T 2xwl_A 75 GG--VDRTESVAL--ALEAAGDAEFVLVHDAARALTPPALIARVVAALK-E-----GHSAVVPGLAPADT--I-----KA 137 (223)
T ss_dssp CC--SSHHHHHHH--HHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHHH-H-----TCSEEEEEECCSSC--E-----EE
T ss_pred CC--CCHHHHHHH--HHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHHh-h-----cCCeEEEEEecccc--e-----EE
Confidence 32 234555542 22333 334 67779997 34457889998883 2 12344444443221 1 12
Q ss_pred EEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhh-hhcC--CCCCchhhhhcccccCh
Q psy1482 172 AYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPL-FSDN--FDFQTQEHFIKGVLINE 248 (627)
Q Consensus 172 ~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~-~~~~--fd~~~~~dfi~~il~~~ 248 (627)
.| ++|++..+.+++. + .. ..+.++|++..+.. +... +....... ++.
T Consensus 138 -~~-~~g~~~~~~e~~~-----------------l--~~---~~~p~~f~~~~l~~~~~~~~~~~~~~~~~----~~~-- 187 (223)
T 2xwl_A 138 -VD-ANGAVLGTPERAG-----------------L--RA---VQTPQGFHADVLRRAYARATAGGVTDDAS----LVE-- 187 (223)
T ss_dssp -EC-TTSBEEECCCGGG-----------------E--EE---ECSCEEEEHHHHHHHHTTCCSCCCCCHHH----HHH--
T ss_pred -Ec-CCCcEEeecChHH-----------------h--ee---eeCCcccCHHHHHHHHHHhhCCCCccHHH----HHH--
Confidence 35 5788887766431 0 00 11245666654443 2222 11111111 111
Q ss_pred hcccCeeEEEEcCCCceeeecCChhhHHHHhHHH
Q psy1482 249 EILDCRLYCSVVDDIEYGISVKDWPSYQIASRDI 282 (627)
Q Consensus 249 ~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~di 282 (627)
..|.++..+..+ + +|.+|++|++|..+...+
T Consensus 188 -~~~~~v~~~~~~-~-~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 188 -QLGTPVQIVDGD-P-LAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp -TTTCCCEEEECC-G-GGCCCCSHHHHHHHHHHH
T ss_pred -HcCCCEEEEECC-c-ccccccCHHHHHHHHHHH
Confidence 236778888876 5 899999999999886643
No 66
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.54 E-value=9.9e-14 Score=138.45 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=83.9
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE--------------eceEECCC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL--------------EKSYLFDN 358 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I--------------~~s~i~~~ 358 (627)
..++.+++.+++++.|+++|.|++++.||++|.|++++.|. +++||++|.|+++|.| .++.||++
T Consensus 6 ~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~ 85 (259)
T 3hsq_A 6 TAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDH 85 (259)
T ss_dssp TCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSS
T ss_pred CcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCC
Confidence 45677788889999999999999999999999999999997 5999999999999999 57899999
Q ss_pred CEeCCCcEEe-------eeeecCCcEECCCcEECCCCEECCCcEECCC
Q psy1482 359 VKIEDNCEVR-------LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNK 399 (627)
Q Consensus 359 v~Ig~~~~i~-------~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~ 399 (627)
+.|+++|.|. .+.||+++.|+.++.|+.+|+||+++.++.+
T Consensus 86 ~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~ 133 (259)
T 3hsq_A 86 NIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHG 133 (259)
T ss_dssp CEECTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTT
T ss_pred cEECCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCC
Confidence 9999999997 5666766655555555555554444443333
No 67
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3.8e-14 Score=135.29 Aligned_cols=117 Identities=16% Similarity=0.242 Sum_probs=85.4
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
|+|||||+|.|+||+| .||+|+|++|+|||+|+++.+..+|+++|+|++++..+++.+++... |. ....+.++. .
T Consensus 1 m~aiIlA~G~s~R~~~--~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~-~~-~~~~~~~~~-~ 75 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG--VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSA-YK-DYKNIVVID-T 75 (196)
T ss_dssp CEEEEEC----CGGGG--SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHH-TT-TTTEEEE----
T ss_pred CEEEEECCCCCCcCCC--CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhh-cc-CCCCEEEEE-C
Confidence 7899999999999987 79999999999999999999999999999999998888899998762 21 112455553 3
Q ss_pred CCcchhhhhhcccccCCccCCEEEEeCCe--eccccHHHHHHHHHH
Q psy1482 98 GCYSFGDVMRDLDGKAVIRNDFILVSGDV--VSNINLLSALKSFKK 141 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~i~~dfll~~gD~--i~~~~l~~~l~~h~~ 141 (627)
...|++++++. +...+.+.|+++.||. +....+..+++.|+.
T Consensus 76 ~~~g~~~si~~--al~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 76 SGKGYIEDLNE--CIGYFSEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp -----CCCCCT--TTTTCSSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHH--HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 45666666663 2333367799999999 566789999999876
No 68
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.53 E-value=1.3e-13 Score=138.07 Aligned_cols=109 Identities=19% Similarity=0.308 Sum_probs=87.2
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-------------eceEECCCC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-------------EKSYLFDNV 359 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-------------~~s~i~~~v 359 (627)
...+.+++.+++++.|+++|.|++++.||++|.|+++++|. ++.||++|.|++++.| .++.||+++
T Consensus 13 ~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~ 92 (265)
T 4e6u_A 13 TAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNN 92 (265)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSC
T ss_pred CCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCe
Confidence 45667778888888888888888899999999999999997 6999999999999999 478999999
Q ss_pred EeCCCcEEe--------eeeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 360 KIEDNCEVR--------LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 360 ~Ig~~~~i~--------~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
.|+++|.|. .++||+++.|+.++.|..+|+||+++.++.++.+
T Consensus 93 ~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i 143 (265)
T 4e6u_A 93 LIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGV 143 (265)
T ss_dssp EECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEE
Confidence 999999996 4777777777766666555555555444444433
No 69
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.53 E-value=3.6e-14 Score=152.94 Aligned_cols=195 Identities=9% Similarity=0.027 Sum_probs=139.0
Q ss_pred CceEEEEEeCCCCCCCCcCCCCcccccc---CCeehHHHHHHHHHh--------CC----CcEEEEEecCChHHHHHHHH
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPL---VNKCLLEYTLEHLHL--------SG----IEEIIVFCTSHVNQIRELVK 80 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi---~g~pli~~~l~~L~~--------~g----i~~i~vv~~~~~~~i~~~l~ 80 (627)
..|.+||||||.||||.. ..||+|+|| .|+|+|+++++.|.+ .| +..+++...+..+.+++|++
T Consensus 101 ~kvavViLAGG~GTRLg~-~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~ 179 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLGV-AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFT 179 (505)
T ss_dssp TCEEEEEECCCCCCTTSC-SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHH
T ss_pred CceEEEEEcCCccccCCC-CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHHHH
Confidence 569999999999999974 789999999 799999999999876 36 55555555567899999998
Q ss_pred hcc-cccCCeeEEEEeCC---------------------CCcchhhhhhcccccCCc-------cCCEEEEeCCee-ccc
Q psy1482 81 RKE-KSLVGTLITLIVSD---------------------GCYSFGDVMRDLDGKAVI-------RNDFILVSGDVV-SNI 130 (627)
Q Consensus 81 ~~~-~~~~~~~v~~i~~~---------------------~~~~~gdalr~l~~~~~i-------~~dfll~~gD~i-~~~ 130 (627)
+.. |+..+-+|.++.|. .+.|+|++++.+....++ .+.|+|+++|++ +..
T Consensus 180 ~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~~ 259 (505)
T 1jv1_A 180 KHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV 259 (505)
T ss_dssp HTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCCT
T ss_pred hhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcccccc
Confidence 743 33111147666542 568999999876543322 256999999996 777
Q ss_pred cHHHHHHHHHHHhcCCCCceEEEEeec-cCCCCCCCCcceEEEEECCCCe--EEEeeCCCCCCCccccchhhhccCCcEE
Q psy1482 131 NLLSALKSFKKINSMDSGAVALVLYKK-KGQSKSSWKEDLIVAYECDSKK--LLMHQTPQDNQKKVNIPMENILLYSKLE 207 (627)
Q Consensus 131 ~l~~~l~~h~~~~~~~~~~~~T~~~~~-~~~~~~~~~~~~vv~~d~~~~~--vl~~~e~~~~~~~~~~~~~~~~~~~~~~ 207 (627)
+...++.+|..+ ++.+|+.+.+ ..+..++| ++..+ +|+ ++.|.+++. ...+.+ .+.-.
T Consensus 260 ~d~~~lg~~~~~-----~~~~~~~v~~k~~~~e~~G----vl~~~--dg~~~vvEy~E~p~------~~~~~~--~~~g~ 320 (505)
T 1jv1_A 260 ADPRFIGFCIQK-----GADCGAKVVEKTNPTEPVG----VVCRV--DGVYQVVEYSEISL------ATAQKR--SSDGR 320 (505)
T ss_dssp TCHHHHHHHHHT-----TCSEEEEEEECCSTTCSCC----EEEEE--TTEEEEECGGGSCH------HHHHCB--CTTSS
T ss_pred chHHHHHHHHHc-----CCCEEEEEEEccCCccCcc----eEEEE--CCeEEEEEEeeCCH------HHhhhc--ccccc
Confidence 777899999876 6888887775 66777887 77665 444 566666552 000001 00001
Q ss_pred EEecCCcceeeecCCchhhhhhc
Q psy1482 208 ICAHLASTGIMICSPAVPPLFSD 230 (627)
Q Consensus 208 ~~~~l~~~Giyi~s~~vl~~~~~ 230 (627)
...+..++|+|+|+.+++..+.+
T Consensus 321 ~~~~~~N~~~~~f~l~~L~~i~~ 343 (505)
T 1jv1_A 321 LLFNAGNIANHFFTVPFLRDVVN 343 (505)
T ss_dssp BSSCEEEEEEEEEEHHHHHHHHH
T ss_pred cccceeeEEEEEecHHHHHHHHH
Confidence 23568899999999998886654
No 70
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.53 E-value=1.9e-13 Score=141.77 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=52.3
Q ss_pred eecCChhhHHHHhHHHhhcccCC--CCCCceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCE
Q psy1482 267 ISVKDWPSYQIASRDIVQRWVHP--FVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCT 343 (627)
Q Consensus 267 ~~V~s~~~y~~a~~dil~~~~~~--~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~ 343 (627)
+.+.+|.........++.+...+ .+.+...+.+++.+++++.|+++++|++++.||++|.|+++|.|+ ++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 44566765444334444332211 122234445555555555555555555555555555555555552 555555555
Q ss_pred ECCCcEE-eceEECCCCEeCCCcEE
Q psy1482 344 IGSNVRL-EKSYLFDNVKIEDNCEV 367 (627)
Q Consensus 344 Ig~~~~I-~~s~i~~~v~Ig~~~~i 367 (627)
|++++.| .++.|+++|.|+.++.|
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTCEE
T ss_pred ECCCcEECCCCEECCccEEcCCcEE
Confidence 5555555 45555555555555555
No 71
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.53 E-value=7.4e-14 Score=138.27 Aligned_cols=103 Identities=14% Similarity=0.267 Sum_probs=80.2
Q ss_pred CeEEECCCeEECCCCEEcCCcEECCCCEECCCceeee-----eEECCCCEECCCcEEe----------------------
Q psy1482 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSH-----CIIGRNCTIGSNVRLE---------------------- 351 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~-----s~Ig~~~~Ig~~~~I~---------------------- 351 (627)
....+++++.|++++.|.+++.||++|.|+++|.|.+ ++||++|.|+++|.|.
T Consensus 58 ~~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~ 137 (247)
T 1qre_A 58 SAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGK 137 (247)
T ss_dssp CCCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTE
T ss_pred CCcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCc
Confidence 3456778888888888888888888888888888853 3888888888888884
Q ss_pred --ceEECCCCEeCCCcEEee-eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 352 --KSYLFDNVKIEDNCEVRL-SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 352 --~s~i~~~v~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
+++||+++.||.+|.|.+ ++||++|+||.++.|.. ++||++++||++++|
T Consensus 138 ~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 138 EYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAA 190 (247)
T ss_dssp EESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEE
T ss_pred cCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEE
Confidence 278888888888888876 88888888888887764 666666666666655
No 72
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.53 E-value=3.6e-14 Score=152.22 Aligned_cols=110 Identities=18% Similarity=0.152 Sum_probs=96.6
Q ss_pred eEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEeeeeecCCcEEC
Q psy1482 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVG 379 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~ii~~~~~Ig 379 (627)
...+++++.|++++++.+++.||++|.|+++|.|++++||++|.|+++|+|.+++||+++.||.++.|.+++||++|+||
T Consensus 273 ~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG 352 (496)
T 3c8v_A 273 GAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTG 352 (496)
T ss_dssp ---CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEEC
T ss_pred CcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEEC
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEECCC----CEECCCcEECCCcEEC--CCcccC
Q psy1482 380 EHSKLLNG----CLLGTGVLIGNKTCLS--GVKLPS 409 (627)
Q Consensus 380 ~~~~i~~~----~ii~~~~~ig~~~~v~--~~~~v~ 409 (627)
+++.|.++ ++||+++.||.++.|. .+..|+
T Consensus 353 ~~a~I~~~~~~~v~IG~~a~IGagsvV~~~~~~~I~ 388 (496)
T 3c8v_A 353 FNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIP 388 (496)
T ss_dssp TTCEEECCSSSCEEECTTCEECTTCEEECSSCEEEC
T ss_pred CCCEEeCCCCcceEECCCCEECCCCEEecCCCcEeC
Confidence 99998877 7888888888887776 554443
No 73
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.52 E-value=1.5e-13 Score=143.23 Aligned_cols=71 Identities=27% Similarity=0.472 Sum_probs=33.0
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEE
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEV 367 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i 367 (627)
+.+++.+++++.|+++++|++++.||++|.|+++|.|+ +++||++|.|+++|.| .++.|+++|.|+.+++|
T Consensus 111 I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 111 IHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 33344444444444444444444444444444444443 4444444444444444 34444444444444444
No 74
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.52 E-value=1.1e-13 Score=138.71 Aligned_cols=110 Identities=20% Similarity=0.208 Sum_probs=78.9
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCcee-------------eeeEECCCCEECCCcEEe--------c
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-------------SHCIIGRNCTIGSNVRLE--------K 352 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I-------------~~s~Ig~~~~Ig~~~~I~--------~ 352 (627)
+..+.+++.||+++.|+++++|.+++.||++|.|+++|.| .+++||++|.|+++|+|. .
T Consensus 25 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~~~ 104 (270)
T 1j2z_A 25 FCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKK 104 (270)
T ss_dssp TCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTTSE
T ss_pred CCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCCcc
Confidence 4556667777888888888888888999999999999998 468899999999999995 4
Q ss_pred eEECCCCEeCCCcEEe-eeeecCCcEECCCcEECCCCEECCCcEECCCcEEC
Q psy1482 353 SYLFDNVKIEDNCEVR-LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLS 403 (627)
Q Consensus 353 s~i~~~v~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~ 403 (627)
+.|++++.|+.++.|. +|+||++|+|+.++.+..++.||+++.||.++.|.
T Consensus 105 ~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~ 156 (270)
T 1j2z_A 105 TLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIH 156 (270)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred EEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEEC
Confidence 7788888877777773 56666666655555544444444444444444333
No 75
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.52 E-value=2.3e-13 Score=142.38 Aligned_cols=16 Identities=25% Similarity=0.300 Sum_probs=9.0
Q ss_pred ceEECCCCEeCCCcEE
Q psy1482 352 KSYLFDNVKIEDNCEV 367 (627)
Q Consensus 352 ~s~i~~~v~Ig~~~~i 367 (627)
+++|+++|.||.++.|
T Consensus 222 ~v~IGd~v~IGa~~~I 237 (372)
T 3pmo_A 222 GVTIGDDVEIGANTTI 237 (372)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CeEECCCCEECCCcEE
Confidence 3555555555555555
No 76
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.51 E-value=2.1e-13 Score=136.45 Aligned_cols=72 Identities=19% Similarity=0.330 Sum_probs=38.7
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEe-------------ceEECCCCEe
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLE-------------KSYLFDNVKI 361 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~-------------~s~i~~~v~I 361 (627)
.+.+++.+++++.|+++|.|++++.||++|.|+++|.|. ++.||++|.|+++|.|. ++.|++++.|
T Consensus 13 ~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~I 92 (262)
T 2qia_A 13 IVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRI 92 (262)
T ss_dssp EECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCcee
Confidence 333444455555555555555555555555555555554 45555666555555553 3555555555
Q ss_pred CCCcEE
Q psy1482 362 EDNCEV 367 (627)
Q Consensus 362 g~~~~i 367 (627)
+++|.|
T Consensus 93 g~~~~I 98 (262)
T 2qia_A 93 RESVTI 98 (262)
T ss_dssp CTTCEE
T ss_pred CCCCEE
Confidence 555555
No 77
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.51 E-value=1.8e-13 Score=136.86 Aligned_cols=108 Identities=13% Similarity=0.163 Sum_probs=80.8
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-------------eeEECCCCEECCCcEEe--------c
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-------------HCIIGRNCTIGSNVRLE--------K 352 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-------------~s~Ig~~~~Ig~~~~I~--------~ 352 (627)
+..+.+++.|++++.|++++.|.+++.||++|.|++++.|+ ++.||++|.|+++|+|. .
T Consensus 29 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~ 108 (262)
T 2qia_A 29 FCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGL 108 (262)
T ss_dssp TCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSE
T ss_pred CCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCc
Confidence 44566677888888888888888889999999999999996 68999999999999995 3
Q ss_pred eEECCCCEeCCCcEE-eeeeecCCcEECCCcEECCCCEECCCcEECCCcE
Q psy1482 353 SYLFDNVKIEDNCEV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTC 401 (627)
Q Consensus 353 s~i~~~v~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~ 401 (627)
+.|++++.|+.++.| .++.||++++|+.++.+..+++||+++.||.++.
T Consensus 109 ~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~ 158 (262)
T 2qia_A 109 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTA 158 (262)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCE
Confidence 889999888888888 4666666666555554444444444444444333
No 78
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.51 E-value=1.5e-13 Score=133.00 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=89.5
Q ss_pred ceeecCeEEECCCeEECCCCEEcC----CcEECCCCEECCCceeee---------------eEECCCCEECCCcEEec-e
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQ----QVVIGEGSSIGENTQLSH---------------CIIGRNCTIGSNVRLEK-S 353 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~----~~~ig~~~~Ig~~~~I~~---------------s~Ig~~~~Ig~~~~I~~-s 353 (627)
+..+.++++||+++.|++++.|.+ ++.||++|.|+++|.|.. ++||++|.|+.+|.|.+ +
T Consensus 51 ~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v 130 (213)
T 3kwd_A 51 FSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPA 130 (213)
T ss_dssp TSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEE
T ss_pred CCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCC
Confidence 445556788888999999988854 589999999999999974 89999999999999965 9
Q ss_pred EECCCCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEEC
Q psy1482 354 YLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLS 403 (627)
Q Consensus 354 ~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~ 403 (627)
.|+++|.||.++.|.+++||++|+||.++.|. +++|++++.|++++.+.
T Consensus 131 ~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V~-~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 131 YIGDGCFIGFRSTVFNARVGAGCVVMMHVLIQ-DVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EECTTCEECTTCEEEEEEECTTCEECSSCEEE-SCEECTTBEECTTCEEC
T ss_pred EECCCCEECCCCEEeCcEECCCCEEcCCCEEC-CcEeCCCCEECCCcEEc
Confidence 99999999999999888888888888888774 56666666655555554
No 79
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.50 E-value=1e-13 Score=137.33 Aligned_cols=224 Identities=13% Similarity=0.095 Sum_probs=127.3
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCCh-HHHHHHHHhcccccCCeeEEEE
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHV-NQIRELVKRKEKSLVGTLITLI 94 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~-~~i~~~l~~~~~~~~~~~v~~i 94 (627)
.+.|||||+|.|+||.+-.+||+|+|++|+|||+|+|+.+..++ +++|+|++++.. +.+++.+....+. ..+.++
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~---~~~~~~ 79 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISD---DRIVVI 79 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCC---TTEEEE
T ss_pred ccEEEEECCccccccCCCCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCC---CCEEEE
Confidence 46899999999999986457999999999999999999999997 999999999643 3455556543221 235555
Q ss_pred eCC--CCcchhhhhhcccccCCc--cCCEEEEeCCe--eccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCCcc
Q psy1482 95 VSD--GCYSFGDVMRDLDGKAVI--RNDFILVSGDV--VSNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWKED 168 (627)
Q Consensus 95 ~~~--~~~~~gdalr~l~~~~~i--~~dfll~~gD~--i~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~~~ 168 (627)
... ...+...++..+...... .+.++++.||. +....+..+++.|+.. ++.++.+ ++.. +
T Consensus 80 ~~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~-----~a~i~~~--~~~d----~--- 145 (246)
T 3f1c_A 80 EGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALET-----GAVDTVI--EALD----T--- 145 (246)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT-----SEEEEEE--ECSS----C---
T ss_pred CCCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc-----CCEEEEE--eccc----e---
Confidence 422 112233344432211000 23588899997 5567899999998875 4555443 2211 2
Q ss_pred eEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhh-hhhcCCCCCchhhhhcccccC
Q psy1482 169 LIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPP-LFSDNFDFQTQEHFIKGVLIN 247 (627)
Q Consensus 169 ~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~-~~~~~fd~~~~~dfi~~il~~ 247 (627)
++..+ +++.+....+++. ++. .. ..++|+.+.|. .+.. .. .....++.+.+.-
T Consensus 146 -i~~~~-~~~~v~~~~~r~~-----------l~~-----~q------tpq~f~~~~L~~a~~~-~~-~~~~~~~TD~~~~ 199 (246)
T 3f1c_A 146 -IVESS-NHEVITDIPVRDH-----------MYQ-----GQ------TPQSFNMKKVFNHYQN-LT-PEKKQILTDACKI 199 (246)
T ss_dssp -EEECS-SSSBCCBCCCGGG-----------EEE-----EE------EEEEEEHHHHHHHHHT-SC-HHHHHHCCCHHHH
T ss_pred -EEEec-CCCeEEEecChHH-----------hhh-----hc------CCceeEHHHHHHHHHH-HH-HcCCCccCcHHHH
Confidence 44333 3444444433221 000 00 22355544332 3322 10 0011122222221
Q ss_pred hhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHhhc
Q psy1482 248 EEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIVQR 285 (627)
Q Consensus 248 ~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil~~ 285 (627)
.+..|.+|..+..+ . +|..|+++++|..+..-+-++
T Consensus 200 ~~~~g~~v~~v~~~-~-~~~~Itt~~Dl~~ae~~l~~~ 235 (246)
T 3f1c_A 200 CLLAGDDVKLVKGE-I-FNIKITTPYDLKVANAIIQER 235 (246)
T ss_dssp HHHTTCCCEEEECC-T-TCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeCC-C-CccCcCCHHHHHHHHHHHhcc
Confidence 22468899999887 5 899999999999987754433
No 80
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.49 E-value=1.4e-13 Score=139.79 Aligned_cols=108 Identities=25% Similarity=0.271 Sum_probs=51.5
Q ss_pred eEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECC--------CCEeCCCcEEe-
Q psy1482 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFD--------NVKIEDNCEVR- 368 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~--------~v~Ig~~~~i~- 368 (627)
+++++.++.|+++|.|+++ +|+.++.||++|.|. +++||++|.||++|+| .++.|+. +++||++|+|+
T Consensus 151 ~a~I~~~~~IG~g~~I~~~-~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~ 229 (316)
T 3tk8_A 151 PAIARRGSFIAKNVVLMPS-YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGA 229 (316)
T ss_dssp TCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECT
T ss_pred CeEEeCCcEEcCCCEECCC-EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECC
Confidence 3344444444444444432 444444555555443 2445555555555544 3334444 44455555442
Q ss_pred eeeecCCcEECCCcEECCCCEECCCcEECCCc-------EECCCccc
Q psy1482 369 LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKT-------CLSGVKLP 408 (627)
Q Consensus 369 ~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~-------~v~~~~~v 408 (627)
+|+|+++++||++++|+.|++|+.++.|++.+ .|+++++|
T Consensus 230 ~a~I~~gv~IG~g~vIgagsvV~~~t~I~d~~~~~v~~g~Vp~gsvV 276 (316)
T 3tk8_A 230 RSEVVEGVIVEENSVISMGVYLGQSTKIYDRETGEVTYGRIPAGSVV 276 (316)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred CCEEcCCCEECCCCEEcCCCEEcCCeeecccccccccccEeCCCCEE
Confidence 44445555555555555555555555444444 45555555
No 81
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.49 E-value=5.7e-14 Score=142.29 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=58.8
Q ss_pred CeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEec---------eEECCCCEeCCCcEE-
Q psy1482 299 NNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEK---------SYLFDNVKIEDNCEV- 367 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~---------s~i~~~v~Ig~~~~i- 367 (627)
++++|++++.|+++ .|+.++.||++|.|+.+++|+ ++.||++|.|+.++.|.+ ++|+++|.||.+|.|
T Consensus 140 ~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~ 218 (304)
T 3eg4_A 140 HSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVV 218 (304)
T ss_dssp TTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEEC
T ss_pred CCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEc
Confidence 33344444444433 344445555555555555554 255555555555555543 666666666666655
Q ss_pred eeeeecCCcEECCCcEECCCCEECCCc-------EECCCcEECCCcccC
Q psy1482 368 RLSVLSYNTGVGEHSKLLNGCLLGTGV-------LIGNKTCLSGVKLPS 409 (627)
Q Consensus 368 ~~~ii~~~~~Ig~~~~i~~~~ii~~~~-------~ig~~~~v~~~~~v~ 409 (627)
.++.||++|+||.++.|.+++.|++++ .|++++++.+|+++.
T Consensus 219 ~gv~IG~~avIgagsvV~~g~~Igd~~~g~~~~~~Ip~~svV~~Gs~v~ 267 (304)
T 3eg4_A 219 EGCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVVVAGTMPG 267 (304)
T ss_dssp TTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEEC
T ss_pred CCcEECCCcEECCCCEEcCCeEECccceeeeccCEeCCCCEEecCcEec
Confidence 355556666666555555555555554 355555555555554
No 82
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.49 E-value=1.6e-14 Score=155.03 Aligned_cols=100 Identities=20% Similarity=0.235 Sum_probs=78.9
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEeee-----e
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLS-----V 371 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~-----i 371 (627)
..+++.||+++.|+++|.| ++++||++|.|+++|+|.+++||++|.||+++.|.+++||++|.||.+|.|.++ +
T Consensus 288 i~g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~ 366 (496)
T 3c8v_A 288 IKGDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLK 366 (496)
T ss_dssp EESSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEE
T ss_pred EeCCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceE
Confidence 3456788888888888888 689999999999999999999999999999999999999999999999998654 5
Q ss_pred ecCCcEECCCcEEC--CCCEECCCcEEC
Q psy1482 372 LSYNTGVGEHSKLL--NGCLLGTGVLIG 397 (627)
Q Consensus 372 i~~~~~Ig~~~~i~--~~~ii~~~~~ig 397 (627)
||++|.||.++.|. +++.|++++.++
T Consensus 367 IG~~a~IGagsvV~~~~~~~I~~~s~v~ 394 (496)
T 3c8v_A 367 IGDGCVVMPHTIIDLEEPLEIPAGHLVW 394 (496)
T ss_dssp ECTTCEECTTCEEECSSCEEECSSEEEC
T ss_pred ECCCCEECCCCEEecCCCcEeCCCCEEE
Confidence 55555555555544 344444443333
No 83
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.49 E-value=8.1e-14 Score=136.34 Aligned_cols=117 Identities=14% Similarity=0.196 Sum_probs=81.5
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhC-CCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLS-GIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~-gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
.|.|||||+|.|+||.. .+||+|+|++|+|||+|+++.|..+ |+++|+|++++..+.+.+++.. .|+ .++.++.
T Consensus 4 ~~~aiIlAaG~g~R~~~-~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~-~~~---~~v~~~~ 78 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKM-SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE-SID---VDLSFAI 78 (228)
T ss_dssp CEEEEEECCCCC--------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT-TSS---SEEEEEC
T ss_pred ceEEEEECCccccccCC-CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH-hCC---CcEEEEC
Confidence 47899999999999973 4699999999999999999999998 8999999999877667665543 232 4566664
Q ss_pred CCCCcchhhhhhcccccCCcc---CCEEEEeCCe--eccccHHHHHHHHHHH
Q psy1482 96 SDGCYSFGDVMRDLDGKAVIR---NDFILVSGDV--VSNINLLSALKSFKKI 142 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i~---~dfll~~gD~--i~~~~l~~~l~~h~~~ 142 (627)
. ..+..++++ .+...+. ..++++.||. +....+..+++.|+..
T Consensus 79 ~--~~~~~~sv~--~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 79 P--GKERQDSVY--SGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp C--CSSHHHHHH--HHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred C--CCCHHHHHH--HHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 2 245556555 2333333 2366778886 4456789999988765
No 84
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.48 E-value=4.1e-13 Score=132.89 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=84.3
Q ss_pred eecCeEEECCCeEECCCCEEcCCc----EECCCCEECCCceee------------------------eeEECCCCEECCC
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQV----VIGEGSSIGENTQLS------------------------HCIIGRNCTIGSN 347 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~----~ig~~~~Ig~~~~I~------------------------~s~Ig~~~~Ig~~ 347 (627)
.+.+++.||+++.|+++|.|.+.. +||++|.|+++|.|. +++||++|.||++
T Consensus 73 ~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~ 152 (247)
T 1qre_A 73 SVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQ 152 (247)
T ss_dssp EEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTT
T ss_pred EEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCC
Confidence 334577888888888888887644 999999999999996 2899999999999
Q ss_pred cEEec-eEECCCCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEEC
Q psy1482 348 VRLEK-SYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLS 403 (627)
Q Consensus 348 ~~I~~-s~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~ 403 (627)
|.|.+ ++|+++|.||.+|.|.++.||++|+||.++.| +++.|++++.|++++++.
T Consensus 153 ~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV-~~~~I~~~~~v~~g~vv~ 208 (247)
T 1qre_A 153 SQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA-IGVTIPDGRYIPAGMVVT 208 (247)
T ss_dssp CEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE-ESCEECTTBEECTTCEEC
T ss_pred CEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE-CCeEeCCCCEECCCCEEe
Confidence 99976 99999999999999876777777777777666 455555555555554443
No 85
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.48 E-value=4.2e-13 Score=140.39 Aligned_cols=88 Identities=17% Similarity=0.300 Sum_probs=49.8
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEEe------
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVR------ 368 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~------ 368 (627)
+.+++.+++++.|+++++|++++.||++|.|+++|+|+ ++.||++|.|++++.| .++.|+++|.|+.++.|.
T Consensus 128 i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~ 207 (372)
T 3pmo_A 128 VAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGF 207 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccc
Confidence 33344444445555555555555555555555555554 4555555555555555 455666666666666663
Q ss_pred --------------eeeecCCcEECCCcEE
Q psy1482 369 --------------LSVLSYNTGVGEHSKL 384 (627)
Q Consensus 369 --------------~~ii~~~~~Ig~~~~i 384 (627)
+++||++|.||.+++|
T Consensus 208 ~~~~g~~~~i~~~g~v~IGd~v~IGa~~~I 237 (372)
T 3pmo_A 208 ANEKGVWQKIAQIGGVTIGDDVEIGANTTI 237 (372)
T ss_dssp EEETTEEEECCCCCCEEECSSCEECTTCEE
T ss_pred cccCCcceeccccCCeEECCCCEECCCcEE
Confidence 4666666666666655
No 86
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.48 E-value=2e-13 Score=136.82 Aligned_cols=50 Identities=26% Similarity=0.256 Sum_probs=24.2
Q ss_pred CEeCCCcEEe-eeeecCCcEECCCcEECCCCEECCCcEECCCc-------EECCCccc
Q psy1482 359 VKIEDNCEVR-LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKT-------CLSGVKLP 408 (627)
Q Consensus 359 v~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~-------~v~~~~~v 408 (627)
++||++|+|+ +|+|.++++||++++|+.|++|..++.|++.+ .|++++++
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svv 235 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVV 235 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEccccccceeccccCCCcEE
Confidence 3444444432 34444455555555555555555555554444 55555555
No 87
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.48 E-value=3.7e-13 Score=139.54 Aligned_cols=89 Identities=20% Similarity=0.359 Sum_probs=50.3
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCcee-eeeEECCCCEECCCcEE--------------------eceEE
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-SHCIIGRNCTIGSNVRL--------------------EKSYL 355 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I-~~s~Ig~~~~Ig~~~~I--------------------~~s~i 355 (627)
+.+++.||+++.|++++.|+.++.||++|.|+++++| .++.||++|.|++++.| ++++|
T Consensus 124 I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~I 203 (341)
T 3eh0_A 124 IESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVII 203 (341)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEE
T ss_pred ECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEE
Confidence 3344444555555555555555555555555555555 35667777777777766 24677
Q ss_pred CCCCEeCCCcEEe-----eeeecCCcEECCCcEEC
Q psy1482 356 FDNVKIEDNCEVR-----LSVLSYNTGVGEHSKLL 385 (627)
Q Consensus 356 ~~~v~Ig~~~~i~-----~~ii~~~~~Ig~~~~i~ 385 (627)
+++|.||.++.|. +++||+++.|+.++.|+
T Consensus 204 Gd~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~ 238 (341)
T 3eh0_A 204 GDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIA 238 (341)
T ss_dssp CSSCEECTTCEEECCSSSCEEECTTCEECTTCEEC
T ss_pred CCCcEECCccEeeccccCceEeccceEECCCCEEe
Confidence 7777777777763 34444444444443333
No 88
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.48 E-value=1.4e-13 Score=134.99 Aligned_cols=207 Identities=11% Similarity=0.061 Sum_probs=115.4
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
.|.|||||+|.|+||+| ..||+|+|++|+|||+|+++.|..++ +++|+|++++..+.+++ +..... ..+.++
T Consensus 6 ~~~aiIlA~G~g~R~~~-~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~----~~i~~~- 78 (231)
T 1vgw_A 6 KNIALIPAAGIGVRFGA-DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP----QVRVWK- 78 (231)
T ss_dssp CEEEEEECC-----------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT----TSEEEC-
T ss_pred ceEEEEEcccccccCCC-CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC----CceEEE-
Confidence 48999999999999997 67999999999999999999999885 99999999876566766 543211 134444
Q ss_pred CCCCcchhhhhhcccccCCc--------cCCEEEEeCCee--ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC
Q psy1482 96 SDGCYSFGDVMRDLDGKAVI--------RNDFILVSGDVV--SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW 165 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i--------~~dfll~~gD~i--~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~ 165 (627)
....+++++++.. ...+ .+.+++++||.. ....+..+++.|+.. ..+. . ++.+....
T Consensus 79 -~~~~~~~~si~~~--l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~----~~~~-~-~~~~~~~~---- 145 (231)
T 1vgw_A 79 -NGGQTRAETVRNG--VAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA----AEGG-I-LAVPVADT---- 145 (231)
T ss_dssp -CCCSSHHHHHHHH--HHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC----TTCE-E-EEEECCSC----
T ss_pred -cCCCcHHHHHHHH--HHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc----CCeE-E-EEeecccc----
Confidence 2345666666532 2112 245888899973 345688888877542 1122 2 22222111
Q ss_pred CcceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhh-hhcCCC--CCchhhhhc
Q psy1482 166 KEDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPL-FSDNFD--FQTQEHFIK 242 (627)
Q Consensus 166 ~~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~-~~~~fd--~~~~~dfi~ 242 (627)
+. .. ++|++....+... . . .. .+.|+|+++.+.. +....+ +....
T Consensus 146 ----~~-~~-~~g~i~~~~~~~~-----------------~--~--~~-~~p~~f~~~~l~~~~~~~~~~g~~~~~---- 193 (231)
T 1vgw_A 146 ----LK-RA-ESGQISATVDRSG-----------------L--W--QA-QTPQLFQAGLLHRALAAENLGGITDEA---- 193 (231)
T ss_dssp ----EE-EE-SSSBEEEEECCTT-----------------E--E--EE-EEEEEEEHHHHHHHHHC----CCCSHH----
T ss_pred ----eE-Ee-CCCceEecCChHH-----------------h--e--ee-eCCcEecHHHHHHHHHHHhhcCCCcHH----
Confidence 11 12 3455543222110 0 0 01 1367787775543 332111 11111
Q ss_pred ccccChhcccCeeEEEEcCCCceeeecCChhhHHHHhH
Q psy1482 243 GVLINEEILDCRLYCSVVDDIEYGISVKDWPSYQIASR 280 (627)
Q Consensus 243 ~il~~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~ 280 (627)
.++. ..|.++..+..+ + .|.+|++|++|..+..
T Consensus 194 ~~~~---~~~~~v~~v~~~-~-~~~dIdtpeDl~~a~~ 226 (231)
T 1vgw_A 194 SAVE---KLGVRPLLIQGD-A-RNLKLTQPQDAYIVRL 226 (231)
T ss_dssp HHHH---TTTCCCEEEECC-T-TCCCCCSHHHHHHHHH
T ss_pred HHHH---HcCCCEEEEECC-c-cccCcCCHHHHHHHHH
Confidence 1111 235677777754 5 8999999999988765
No 89
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.47 E-value=4.4e-13 Score=139.70 Aligned_cols=84 Identities=14% Similarity=0.280 Sum_probs=48.6
Q ss_pred EEECCCeEECCCCEEcCCcEECCCCEECCCcee-eeeEECCCCEECCCcEEe--------------------ceEECCCC
Q psy1482 301 IYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQL-SHCIIGRNCTIGSNVRLE--------------------KSYLFDNV 359 (627)
Q Consensus 301 ~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I-~~s~Ig~~~~Ig~~~~I~--------------------~s~i~~~v 359 (627)
+.|++++.|+++|.|++++.||++|.|++++.| .+++||++|.|+++++|. +++|+++|
T Consensus 133 ~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v 212 (357)
T 4e79_A 133 CVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGNDV 212 (357)
T ss_dssp CEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEEECTTC
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEEEcCCc
Confidence 333444444444444445555555555555555 356777777777777773 57778888
Q ss_pred EeCCCcEEe-----eeeecCCcEECCCcEE
Q psy1482 360 KIEDNCEVR-----LSVLSYNTGVGEHSKL 384 (627)
Q Consensus 360 ~Ig~~~~i~-----~~ii~~~~~Ig~~~~i 384 (627)
.||.+|.|. +++||+++.|+.++.|
T Consensus 213 ~IG~~~~I~~g~~~~t~Ig~~~~I~~~v~I 242 (357)
T 4e79_A 213 RIGSNCSIDRGALDNTILEDGVIIDNLVQI 242 (357)
T ss_dssp EECTTCEECCCSSSCEEECTTCEECTTCEE
T ss_pred EEccccEEeccccCCccccCCcccCCCccc
Confidence 888888773 4445444444443333
No 90
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.47 E-value=5.3e-13 Score=134.34 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=56.2
Q ss_pred EECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEec---------------eEECCCCEeCCCc
Q psy1482 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEK---------------SYLFDNVKIEDNC 365 (627)
Q Consensus 302 ~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~---------------s~i~~~v~Ig~~~ 365 (627)
.+++++.|++++.|++++.||++|.|+++|.|+ +++||++|.|+++|.|.. ++|++++.|++++
T Consensus 4 ~i~~~~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~ 83 (273)
T 3fs8_A 4 NISKSAIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTEN 83 (273)
T ss_dssp EECTTCEECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTC
T ss_pred ccCCCeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCC
Confidence 345555555555555555666666666666553 456666666666666632 5666666666666
Q ss_pred EE-eeeeecCCcEECCCcEECCCCEECCCcEECCCc
Q psy1482 366 EV-RLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKT 400 (627)
Q Consensus 366 ~i-~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~ 400 (627)
.| .+++||+++.||+++.|.++++||+++.|+.++
T Consensus 84 ~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~ 119 (273)
T 3fs8_A 84 VIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLS 119 (273)
T ss_dssp EEESSCEECTTCEECSSCEECSSCEECSSCEECTTC
T ss_pred EEeCCCEECCCCEECCceEECCCCEECCCCEECccc
Confidence 66 355555555555555554444444444444433
No 91
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.47 E-value=1.2e-13 Score=135.31 Aligned_cols=209 Identities=9% Similarity=0.023 Sum_probs=122.9
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
.+.|||||+|.|+||. +|+|+|++|+|||+|+++.+..+| +++|+|++. .+.+.+++.. ++ +++ +.
T Consensus 3 ~~~aiIlA~G~s~R~~----~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~--~g---~~~--~~ 69 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP----LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ--FG---AQV--HR 69 (229)
T ss_dssp CEEEEEECCSCCSSSS----CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH--TT---CEE--EE
T ss_pred cEEEEEEcCCCCCCCC----CcccceECCEEHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH--cC---CEE--Ee
Confidence 3679999999999995 599999999999999999999998 699999884 5678888765 22 444 33
Q ss_pred CC-----CCcchhhhhhcccccCCc-c-CCEEEEeCCee--ccccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCCC
Q psy1482 96 SD-----GCYSFGDVMRDLDGKAVI-R-NDFILVSGDVV--SNINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSWK 166 (627)
Q Consensus 96 ~~-----~~~~~gdalr~l~~~~~i-~-~dfll~~gD~i--~~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~~ 166 (627)
.+ ...+..++++. +...+ . +.|++++||.- ....+..+++.|+... ....+|+. +...+..++
T Consensus 70 ~~~~~~~~~~~~~~~v~~--al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~---~~~~~~~~--~~~~p~~~~- 141 (229)
T 1qwj_A 70 RSSETSKDSSTSLDAIVE--FLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEG---YDSVFSVV--RRHQFRWSE- 141 (229)
T ss_dssp CCGGGSSTTCCHHHHHHH--HHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSC---CSEEEEEE--EECCCEECC-
T ss_pred ChhhhcCCCCcHHHHHHH--HHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCC---CCEEEEEe--eccChhHhh-
Confidence 32 12222244442 22222 2 45899999983 4467889998886541 12233333 322222222
Q ss_pred cceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEecCCcceeeecCCchhhhhhcCCCCCchhhhhccccc
Q psy1482 167 EDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAHLASTGIMICSPAVPPLFSDNFDFQTQEHFIKGVLI 246 (627)
Q Consensus 167 ~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyi~s~~vl~~~~~~fd~~~~~dfi~~il~ 246 (627)
+ .| + +..+.+........+-+.. ..+ .....++|+|++++++| + + .+
T Consensus 142 ---v--~~---~-~~~~~~~~~~~~~~~~~~~---~~~----~~~~~n~giY~~~~~~l--~-------------~-~~- 188 (229)
T 1qwj_A 142 ---I--QK---G-VREVTEPLNLNPAKRPRRQ---DWD----GELYENGSFYFAKRHLI--E-------------M-GY- 188 (229)
T ss_dssp ---C--CS---S-TTCCCCBSSSBTTBCCCTT---TSC----CEEEEEEEEEEEEHHHH--H-------------T-TC-
T ss_pred ---c--cc---c-ccccccccccccccccCCC---CCC----ceEEEeeEEEEEEHHHh--c-------------c-cc-
Confidence 1 11 1 1111110000000000000 000 22356899999998886 0 0 01
Q ss_pred ChhcccCeeEEEEcCCCceeeecCChhhHHHHhHHHh
Q psy1482 247 NEEILDCRLYCSVVDDIEYGISVKDWPSYQIASRDIV 283 (627)
Q Consensus 247 ~~~~~g~~I~~~~~~~~~~~~~V~s~~~y~~a~~dil 283 (627)
..|..+..+..+.+ +|.+|+++++|..+...+-
T Consensus 189 ---~~g~~~~~~~~~~~-~~~dIdt~~Dl~~a~~~~~ 221 (229)
T 1qwj_A 189 ---LQGGKMAYYEMRAE-HSVDIDVDIDWPIAEQRVL 221 (229)
T ss_dssp ---SSCSSEEEEECCGG-GCCCHHHHCSHHHHHHHHH
T ss_pred ---ccCCeEEEEECCcc-cccCCCCHHHHHHHHHHHH
Confidence 12444533255545 8999999999999877543
No 92
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.46 E-value=3.8e-13 Score=125.60 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=79.6
Q ss_pred eeecCeEEECCCeEECCCCEEcCC---cEECCCCEECCCceee-----eeEECCCCEECCCcEEeceEECCCCEeCCCcE
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQ---VVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCE 366 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~ 366 (627)
....+++.+|+++.|++++.|.++ +.||++|.|+++|.|. +++||++|.|+++|.|.+++|++++.||.++.
T Consensus 23 a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~ 102 (173)
T 1v3w_A 23 AVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSV 102 (173)
T ss_dssp SEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCE
T ss_pred CEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCE
Confidence 344567889999999999999864 8999999999999997 59999999999999999999999998888887
Q ss_pred Ee-eeeecCCcEECCCcEECCCCEECCCcEE
Q psy1482 367 VR-LSVLSYNTGVGEHSKLLNGCLLGTGVLI 396 (627)
Q Consensus 367 i~-~~ii~~~~~Ig~~~~i~~~~ii~~~~~i 396 (627)
|. ++.||++++||.++.|.+++.|++++++
T Consensus 103 i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 103 ILDGAKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp ECTTCEECSSEEECTTCEECTTCEECTTEEE
T ss_pred EeCCCEECCCCEECCCCEECCCcEeCCCcEE
Confidence 64 4555555555555555544444444444
No 93
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.46 E-value=6.9e-13 Score=135.40 Aligned_cols=54 Identities=15% Similarity=0.346 Sum_probs=23.6
Q ss_pred ecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE
Q psy1482 297 RRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 297 ~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I 350 (627)
+.+++.+++++.|+++|+|++++.||++|.|+++++|. ++.||++|.|++++.|
T Consensus 16 I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 16 VHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVV 70 (305)
T ss_dssp ECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEe
Confidence 33344444444444444444444444444444444443 3444444444444444
No 94
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.46 E-value=5.8e-13 Score=124.38 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=73.7
Q ss_pred eeecCeEEECCCeEECCCCEEcCC---cEECCCCEECCCceee-----eeEECCCCEECCCcEEeceEECCCCEeCCCcE
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQ---VVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCE 366 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~ 366 (627)
..+.+++++|+++.|++++.|.++ +.||++|.|+++|.|. +++||++|.|+.++.|.+++|++++.||.++.
T Consensus 25 ~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~ 104 (173)
T 1xhd_A 25 VTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSI 104 (173)
T ss_dssp CEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCE
T ss_pred CEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCE
Confidence 344467888999999999998765 8999999999999997 79999999999999999998988888888777
Q ss_pred Ee-eeeecCCcEECCCcEECCCCEEC
Q psy1482 367 VR-LSVLSYNTGVGEHSKLLNGCLLG 391 (627)
Q Consensus 367 i~-~~ii~~~~~Ig~~~~i~~~~ii~ 391 (627)
|. ++.||++++|+.++.|.++..|+
T Consensus 105 i~~~~~Ig~~~~Ig~~s~V~~~~~i~ 130 (173)
T 1xhd_A 105 ILDGAEIGEGAFIGAGSLVSQGKKIP 130 (173)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EcCCCEECCCCEECCCCEECCCcEeC
Confidence 53 34444444444444443333333
No 95
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.45 E-value=9e-13 Score=134.54 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=38.9
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-----eeEECCCCEECCCcEE
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I 350 (627)
+..+.++++||+++.|+++++|.+++.||++|.|++++.|+ +++||++|.|+++|.|
T Consensus 31 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 31 YCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVV 92 (305)
T ss_dssp TCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEe
Confidence 34455566666666666666666677777777777777775 4677777777777776
No 96
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.45 E-value=4.9e-13 Score=134.03 Aligned_cols=103 Identities=10% Similarity=0.186 Sum_probs=60.7
Q ss_pred CeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEec-eEECCCCEeCCCcEEe---------eeeecC
Q psy1482 306 DVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEK-SYLFDNVKIEDNCEVR---------LSVLSY 374 (627)
Q Consensus 306 ~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~-s~i~~~v~Ig~~~~i~---------~~ii~~ 374 (627)
++.|++++.|++++.||++|.|+++ .|. ++.||++|.|+.+|+|.+ +.||++|.|+.++.|. +++||+
T Consensus 104 g~~I~p~a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd 182 (276)
T 3gos_A 104 GFRVVPPATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED 182 (276)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECT
T ss_pred CcEECCCcEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECC
Confidence 4445555555555555555555554 333 555666666666666633 6666666666666663 366666
Q ss_pred CcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 375 NTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 375 ~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+|+||.++.|.+|++||++++||++++|.+++.+.
T Consensus 183 ~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~ 217 (276)
T 3gos_A 183 NCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIY 217 (276)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCcEEc
Confidence 66666666666666666666666666666665554
No 97
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.45 E-value=4.5e-13 Score=135.73 Aligned_cols=103 Identities=11% Similarity=0.218 Sum_probs=58.8
Q ss_pred CeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEe-ceEECCCCEeCCCcEEee---------eeecC
Q psy1482 306 DVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLE-KSYLFDNVKIEDNCEVRL---------SVLSY 374 (627)
Q Consensus 306 ~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~-~s~i~~~v~Ig~~~~i~~---------~ii~~ 374 (627)
++.|++++.|++++.||++|.|+++ .|+ ++.||++|.|+.++.|+ ++.||++|.|+.++.|.+ ++||+
T Consensus 129 g~~I~p~a~I~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd 207 (304)
T 3eg4_A 129 GFRAVPNCIVRHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIED 207 (304)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECT
T ss_pred CcEEcCCEEECCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcC
Confidence 4444455555555555555555544 332 45555555555555552 355566666666666544 66666
Q ss_pred CcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 375 NTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 375 ~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+|+||.++.|.++++||++++||++++|.++++|.
T Consensus 208 ~v~IG~~a~I~~gv~IG~~avIgagsvV~~g~~Ig 242 (304)
T 3eg4_A 208 NCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIV 242 (304)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCCEE
T ss_pred CCEECCCCEEcCCcEECCCcEECCCCEEcCCeEEC
Confidence 66666666666666666666666666666665554
No 98
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.45 E-value=8.9e-14 Score=138.50 Aligned_cols=106 Identities=13% Similarity=0.175 Sum_probs=87.0
Q ss_pred EECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEeceEECCCCEeCCCcEEee---------ee
Q psy1482 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRL---------SV 371 (627)
Q Consensus 302 ~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~---------~i 371 (627)
.++.++.|++.++|..++.||++|.|++++.|. ++.||++|+|..++.++ +.||++|.|+.+|.|.+ ++
T Consensus 180 vI~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~V~ 258 (347)
T 3r5d_A 180 VVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIVIS 258 (347)
T ss_dssp CCCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC------CCCCE
T ss_pred eccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCCCCccceE
Confidence 456677777777777777777777777777775 67788888887776665 88999999999998864 79
Q ss_pred ecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 372 LSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 372 i~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
||++|.||.|+.| ++.||++++||+|++|..+++|+.
T Consensus 259 IGdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkdt~I~~ 295 (347)
T 3r5d_A 259 VGEGCLIGANAGI--GIPLGDRNIVEAGLYITAGTKVAL 295 (347)
T ss_dssp ECTTCEECTTCEE--CSCBCTTCEECTTCEECTTCEEEE
T ss_pred ECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEEe
Confidence 9999999999999 899999999999999999998875
No 99
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.44 E-value=5.5e-13 Score=126.21 Aligned_cols=91 Identities=24% Similarity=0.297 Sum_probs=70.3
Q ss_pred eeecCeEEECCCeEECCCCEEcCCc---EECCCCEECCCcee------------eeeEECCCCEECCCcEEeceEECCCC
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQV---VIGEGSSIGENTQL------------SHCIIGRNCTIGSNVRLEKSYLFDNV 359 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~---~ig~~~~Ig~~~~I------------~~s~Ig~~~~Ig~~~~I~~s~i~~~v 359 (627)
..+.+++.||+++.|++++.|.+++ .||++|.|+++|.| .+++||++|.||.+|.|.++.|++++
T Consensus 28 ~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~ 107 (187)
T 3r3r_A 28 SVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRV 107 (187)
T ss_dssp CEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSE
T ss_pred CEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCC
Confidence 3455678888899999999987654 99999999999999 57999999999999999988888888
Q ss_pred EeCCCcEEe-eeeecCCcEECCCcEEC
Q psy1482 360 KIEDNCEVR-LSVLSYNTGVGEHSKLL 385 (627)
Q Consensus 360 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~ 385 (627)
.||.+|.|. ++.||++|+||.++.|.
T Consensus 108 ~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~ 134 (187)
T 3r3r_A 108 LVGMGSIVLDGAIIEDDVMIGAGSLVP 134 (187)
T ss_dssp EECTTCEECTTCEECSSEEECTTCEEC
T ss_pred EECCCCEECCCCEECCCCEECCCCEEC
Confidence 888777762 34444444444443333
No 100
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.44 E-value=3.2e-13 Score=137.14 Aligned_cols=108 Identities=9% Similarity=0.106 Sum_probs=76.5
Q ss_pred ECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEE-eceEECCCCEeCCCcEEee---------eee
Q psy1482 303 LAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVRL---------SVL 372 (627)
Q Consensus 303 i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~~---------~ii 372 (627)
++.++.|.+++.|++++.||++|.|+++....++.||++|.|+.+++| .++.||++|.|+.++.|.+ ++|
T Consensus 142 ~~~~~~I~p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~I 221 (316)
T 3tk8_A 142 AAGGFRVVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVII 221 (316)
T ss_dssp HHHCCEECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEE
T ss_pred ecCCcEEeCCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEE
Confidence 344667777777777777777777776622235667777777777777 4577777777777777754 777
Q ss_pred cCCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 373 SYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 373 ~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
|++|+||.+++|.+|++||++++||++++|..++.|..
T Consensus 222 Gd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~~t~I~d 259 (316)
T 3tk8_A 222 EDNCFIGARSEVVEGVIVEENSVISMGVYLGQSTKIYD 259 (316)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEE
T ss_pred CCCCEECCCCEEcCCCEECCCCEEcCCCEEcCCeeecc
Confidence 88888888777777777777777777777777776653
No 101
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.44 E-value=2.6e-12 Score=122.23 Aligned_cols=122 Identities=11% Similarity=0.137 Sum_probs=60.3
Q ss_pred eeeecCChhhHHHHhHHHhhcccCCCCCCceeecCeEEECCCeEECCCCEEcCCcEEC--CCCEECCCceee-eeEECCC
Q psy1482 265 YGISVKDWPSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIG--EGSSIGENTQLS-HCIIGRN 341 (627)
Q Consensus 265 ~~~~V~s~~~y~~a~~dil~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig--~~~~Ig~~~~I~-~s~Ig~~ 341 (627)
+..-++++....+..+.+.+.... . ..++++++.+++ ++.|| ++|.|++++.|+ ++.||++
T Consensus 50 ~~iaig~~~~r~~~~~~l~~~~~~--~--------~~~i~~~a~i~~------~~~Ig~~~g~~I~~~~~I~~~~~IG~~ 113 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISENGFK--I--------VNLIHKSALISP------SAIVEENAGILIMPYVVINAKAKIEKG 113 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHTTTCC--B--------CCEECTTCEECT------TCEECTTSCCEECTTCEECTTCEECTT
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCc--c--------ccccCCeEEECC------CceeCCCCCcEEcCCCEECCCCEECCC
Confidence 445667776666665555432210 0 112333333332 33333 333333333332 3455555
Q ss_pred CEECCCcEE-eceEECCCCEeCCCcEEee-eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 342 CTIGSNVRL-EKSYLFDNVKIEDNCEVRL-SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 342 ~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
|.|+.+|.| +++.|++++.|+.++.|.+ +.||++|+||.++.|.++++||++++||+++++
T Consensus 114 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 114 VILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATL 176 (194)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEE
Confidence 555555555 3556666666666666543 555555555555555555555555555555544
No 102
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.42 E-value=9.5e-13 Score=124.98 Aligned_cols=73 Identities=25% Similarity=0.350 Sum_probs=60.4
Q ss_pred eeecCeEEECCCeEECCCCEEcC---CcEECCCCEECCCceee------eeEECCCCEECCCcEEeceEECCCCEeCCCc
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQ---QVVIGEGSSIGENTQLS------HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNC 365 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~---~~~ig~~~~Ig~~~~I~------~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~ 365 (627)
..+.+++.||+++.|++++.|.+ ++.||++|.|+++|.|. +++||++|.||.+|.|.+++|+++|.||.+|
T Consensus 46 ~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~ 125 (191)
T 3ixc_A 46 ARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGS 125 (191)
T ss_dssp CEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTC
T ss_pred CEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCC
Confidence 34456778888888888888864 45899999999999996 8999999999999999888888888877777
Q ss_pred EE
Q psy1482 366 EV 367 (627)
Q Consensus 366 ~i 367 (627)
.|
T Consensus 126 ~I 127 (191)
T 3ixc_A 126 IV 127 (191)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 103
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.42 E-value=7.5e-13 Score=131.41 Aligned_cols=104 Identities=25% Similarity=0.388 Sum_probs=74.6
Q ss_pred CeEEECCCeEECCCCEE----cCCcEECCCCEECCCceee---eeEECCCCEECCCcEEe----ceEECCCCEeCCCcEE
Q psy1482 299 NNIYLAEDVLIGKTSVL----KQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLE----KSYLFDNVKIEDNCEV 367 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i----~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~----~s~i~~~v~Ig~~~~i 367 (627)
..+.+++++.|...+.+ .+++.||++|.|++++.|. +++||++|.|+++|.|. ++.||++|.||.+|.|
T Consensus 62 ~~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I 141 (252)
T 3jqy_B 62 NKLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVIL 141 (252)
T ss_dssp CEEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEE
T ss_pred CEEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEE
Confidence 45667777776665555 4556788888888888884 68899999999999886 7889999999999888
Q ss_pred eee--------------------eecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 368 RLS--------------------VLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 368 ~~~--------------------ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
.++ +||++|+||.++.|.++++||++++||++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 196 (252)
T 3jqy_B 142 RASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIV 196 (252)
T ss_dssp ECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTCEECTTCEE
T ss_pred ecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 653 55666666655555555555555555555554
No 104
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.42 E-value=1.7e-12 Score=123.56 Aligned_cols=99 Identities=20% Similarity=0.309 Sum_probs=45.7
Q ss_pred cCeEEEC--CCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEeceEECCCCEeCCCcEEeeeeecC
Q psy1482 298 RNNIYLA--EDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSY 374 (627)
Q Consensus 298 ~~~~~i~--~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~ii~~ 374 (627)
.+++.++ +++.|+++++|++++.||++|.|+.++.|+ ++.||++|+|+++| .|..+++||++|+| |.
T Consensus 85 ~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~-----~i~~~~~Ig~~~~I-----g~ 154 (194)
T 3bfp_A 85 SPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGA-----KCAGNVKIGKNCFL-----GI 154 (194)
T ss_dssp CTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC-----EECTTCEECTTCEE-----CT
T ss_pred CCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCC-----EECCCcEECCCCEE-----cC
Confidence 3444455 555555555555555555555555554443 34444444444444 44444455544443 33
Q ss_pred CcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 375 NTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 375 ~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
+++|.++++|+++|+||.+++|..+ +++++++
T Consensus 155 ~~~i~~~~~Ig~~~~Igagsvv~~~--v~~~~~~ 186 (194)
T 3bfp_A 155 NSCVLPNLSLADDSILGGGATLVKN--QDEKGVF 186 (194)
T ss_dssp TCEECTTCEECTTCEECTTCEECSC--BCSCCEE
T ss_pred CCEECCCCEECCCCEECCCCEEccc--cCCCCEE
Confidence 3334444444444444444444444 3444433
No 105
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.41 E-value=2.3e-12 Score=122.72 Aligned_cols=104 Identities=22% Similarity=0.303 Sum_probs=66.4
Q ss_pred ceeecCeEEECCCeEECCCCEEc---CCcEECCCCEECCCceee-----------------eeEECCCCEECCCcEEece
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLK---QQVVIGEGSSIGENTQLS-----------------HCIIGRNCTIGSNVRLEKS 353 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~---~~~~ig~~~~Ig~~~~I~-----------------~s~Ig~~~~Ig~~~~I~~s 353 (627)
...+.+++.||+++.|++++.|. +++.||++|.|+++|.|. +++||+++.|+.++.+.++
T Consensus 24 ~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~~ 103 (194)
T 3tv0_A 24 ESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQAM 103 (194)
T ss_dssp TSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECCS
T ss_pred CCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEeee
Confidence 34556677788888888888874 457899999999999984 2567777777777777666
Q ss_pred EECCCCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 354 YLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 354 ~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
.|++++.||.+|. |+++++|+++|+||.+++|..++.|+++++|
T Consensus 104 ~Ig~~~~Ig~~~~-----------I~~gv~IG~~~~IgagsvV~~~~~Ip~~svv 147 (194)
T 3tv0_A 104 KMGDNNVIESKAY-----------VGRNVILTSGCIIGACCNLNTFEVIPENTVI 147 (194)
T ss_dssp EECSSCEECTTCE-----------ECTTEEECSSCEECTTCEECCCEEECTTEEE
T ss_pred eecccceecceee-----------ECCeEEECCCCEECCCCEECCCcEECCCCEE
Confidence 6666555555444 3334444444444444444444444444444
No 106
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.41 E-value=3.2e-13 Score=133.46 Aligned_cols=106 Identities=9% Similarity=0.106 Sum_probs=81.0
Q ss_pred EECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEeceEECCCCEeCCCcEEee---------ee
Q psy1482 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRL---------SV 371 (627)
Q Consensus 302 ~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~---------~i 371 (627)
.++.++.|++.++|.+++.||++|.|++++.|. ++.|+.+|+|..++.+ ++.||++|.|+.++.|.+ +.
T Consensus 157 vI~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~i-Gv~IGd~v~IgpGa~IgG~~~~~~~~~V~ 235 (332)
T 3fsy_A 157 VVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISA-GVVVGDGSDVGGGASIMGTLSGGGTHVIS 235 (332)
T ss_dssp CCCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECT-TCEECTTCEECTTCEECSBCC---CCBCE
T ss_pred ecCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceec-ceEECCCCEECCCCEEcCCCCCCCccceE
Confidence 356677777777777777777777777777775 6677777777554433 378888888888888864 88
Q ss_pred ecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 372 LSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 372 i~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
||++|.||.++.| ++.||++|+||+|++|..+++|.-
T Consensus 236 IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~I~~ 272 (332)
T 3fsy_A 236 IGKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTRVTM 272 (332)
T ss_dssp ECTTCEECTTCEE--CSCBCSSCEECTTCEECTTCEEEC
T ss_pred ECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEEe
Confidence 8888888888888 788888888888888888887753
No 107
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.41 E-value=1.1e-12 Score=124.42 Aligned_cols=73 Identities=22% Similarity=0.314 Sum_probs=60.6
Q ss_pred eeecCeEEECCCeEECCCCEEcCC---cEECCCCEECCCceeeee------------EECCCCEECCCcEEeceEECCCC
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQ---VVIGEGSSIGENTQLSHC------------IIGRNCTIGSNVRLEKSYLFDNV 359 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~Ig~~~~I~~s------------~Ig~~~~Ig~~~~I~~s~i~~~v 359 (627)
..+.+++.+|+++.|++++.|.++ +.||++|.|++++.|..+ +||++|.||.+|.|.+++|+++|
T Consensus 32 ~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~ 111 (189)
T 3r1w_A 32 SVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRV 111 (189)
T ss_dssp CEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSE
T ss_pred CEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCc
Confidence 345567888888889888888744 599999999999999754 99999999999999888888888
Q ss_pred EeCCCcEE
Q psy1482 360 KIEDNCEV 367 (627)
Q Consensus 360 ~Ig~~~~i 367 (627)
.||.++.|
T Consensus 112 ~Ig~~~~i 119 (189)
T 3r1w_A 112 LIGMKSMI 119 (189)
T ss_dssp EECTTCEE
T ss_pred EECCCCEE
Confidence 87777664
No 108
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.41 E-value=2e-12 Score=125.75 Aligned_cols=84 Identities=14% Similarity=0.262 Sum_probs=41.9
Q ss_pred cEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEEee-eeecCCcEECCCcEECCCCEECCCcE
Q psy1482 319 VVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVRL-SVLSYNTGVGEHSKLLNGCLLGTGVL 395 (627)
Q Consensus 319 ~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~ii~~~~~ 395 (627)
+.||++|.|++++.|+ ++.||++|.|+.+|.| +++.|++++.|+.++.|.+ +.||++|+||.++.|.+++.||++++
T Consensus 112 v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~ 191 (220)
T 4ea9_A 112 VRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTI 191 (220)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCCE
Confidence 3333333333333332 3455555555555555 3455555566665555532 55555555555555555555555555
Q ss_pred ECCCcEE
Q psy1482 396 IGNKTCL 402 (627)
Q Consensus 396 ig~~~~v 402 (627)
||++++|
T Consensus 192 igagsvv 198 (220)
T 4ea9_A 192 VGAGGVV 198 (220)
T ss_dssp ECTTCEE
T ss_pred ECCCCEE
Confidence 5555443
No 109
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.41 E-value=2.3e-12 Score=135.47 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=26.1
Q ss_pred EECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEE-eceEECCCCEeCCCcEE
Q psy1482 302 YLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL-EKSYLFDNVKIEDNCEV 367 (627)
Q Consensus 302 ~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i 367 (627)
.+++++.|++++.|++++.||++|.|++++.|+ +++||++|.|+++|+| .++.|+++|.|+.++.|
T Consensus 138 ~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 205 (374)
T 2iu8_A 138 IIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVI 205 (374)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEE
Confidence 333333333333333333333333333333332 3344444444444444 33444444444444443
No 110
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.40 E-value=4.3e-12 Score=123.37 Aligned_cols=132 Identities=17% Similarity=0.218 Sum_probs=76.6
Q ss_pred eeecCChhhHHHHhHHHhhcccCCCCCCceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEE
Q psy1482 266 GISVKDWPSYQIASRDIVQRWVHPFVPSYKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTI 344 (627)
Q Consensus 266 ~~~V~s~~~y~~a~~dil~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~I 344 (627)
..-++++....+..+.+...... + ....++..++++++.|++++.|+++++|++++.||++|.|. +++|+++|.|
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~g~~--~--~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~I 150 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDHGFS--L--VNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRL 150 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCE--E--CCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EEecCCHHHHHHHHHHHHhcCCC--c--CCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 33455665555554444432211 0 12345555666666666666666666666667777666665 5666667777
Q ss_pred CCCcEE-eceEECCCCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 345 GSNVRL-EKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 345 g~~~~I-~~s~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
|++|+| .++.|+.+++||++|+ ||.+++|.++++|+++|+||.+++|..+ +++++++
T Consensus 151 g~~~~i~~~~~i~~~v~Ig~~~~-----Ig~~~~i~~~~~Ig~~~~igagsvv~~~--v~~~~~~ 208 (220)
T 4ea9_A 151 GAACHLGPASALAGGVSVGERAF-----LGVGARVIPGVTIGADTIVGAGGVVVRD--LPDSVLA 208 (220)
T ss_dssp CTTCEECTTCEECSSCEECTTCE-----ECTTCEECTTCEECTTCEECTTCEECSC--BCTTCEE
T ss_pred CCCCEECCCCEEcCCCEECCCCE-----ECCCCEEcCCcEECCCCEECCCCEEccc--cCCCcEE
Confidence 776666 3456666666666655 4555555555555556666666666554 4555544
No 111
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.40 E-value=3.5e-12 Score=125.18 Aligned_cols=119 Identities=11% Similarity=0.191 Sum_probs=80.3
Q ss_pred cCCceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCChHH-HHHHHHhcccccCCeeE
Q psy1482 14 KDEVLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHVNQ-IRELVKRKEKSLVGTLI 91 (627)
Q Consensus 14 ~~~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~~~-i~~~l~~~~~~~~~~~v 91 (627)
.-++|.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|..++ +++|+|++++.... +++++. +. .++
T Consensus 10 ~~~~~~aiILAaG~s~Rm~~-~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~---~~---~~~ 82 (234)
T 1vpa_A 10 HHHMNVAILLAAGKGERMSE-NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF---HE---KVL 82 (234)
T ss_dssp -CCCEEEEEEECCCCGGGCC-SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC---CT---TEE
T ss_pred ccccCeEEEEcCcchhhcCC-CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc---cC---Cce
Confidence 45789999999999999974 46999999999999999999999998 89999999875543 343332 21 233
Q ss_pred EEEeCC--CCcchhhhhhcccccCCccCC-EEEEeCCe-e-ccccHHHHHHHHHHH
Q psy1482 92 TLIVSD--GCYSFGDVMRDLDGKAVIRND-FILVSGDV-V-SNINLLSALKSFKKI 142 (627)
Q Consensus 92 ~~i~~~--~~~~~gdalr~l~~~~~i~~d-fll~~gD~-i-~~~~l~~~l~~h~~~ 142 (627)
.+.... ...+...++..+.. . ..+ ++++.||. + ....+..+++.|...
T Consensus 83 ~~~~gg~~~~~sv~~al~~~~~--~-~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 83 GIVEGGDTRSQSVRSALEFLEK--F-SPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp EEEECCSSHHHHHHHHHHHHGG--G-CCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHHHHHhhh--c-CCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 333221 11123344442211 0 234 56667997 3 445788888888754
No 112
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.39 E-value=2.5e-12 Score=124.47 Aligned_cols=111 Identities=18% Similarity=0.170 Sum_probs=76.7
Q ss_pred CeEEECCCeEECCC-CEEcCC---cEECCCCEECCCceee----eeEECCCCEECCCcEE----eceEECCCCEeCCCcE
Q psy1482 299 NNIYLAEDVLIGKT-SVLKQQ---VVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRL----EKSYLFDNVKIEDNCE 366 (627)
Q Consensus 299 ~~~~i~~~~~i~~~-~~i~~~---~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I----~~s~i~~~v~Ig~~~~ 366 (627)
..+++++++.|.+. +.|.++ +.||++|.|++++.|. ++.||++|.|++++.+ .+++||++|.|+.+|+
T Consensus 35 ~~v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~ 114 (215)
T 2wlg_A 35 NSVYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYE 114 (215)
T ss_dssp CEEEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEE
T ss_pred CEEEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEE
Confidence 46788888888777 566664 8999999999999886 3899999999996555 5789999999999999
Q ss_pred Eeee--------------eecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 367 VRLS--------------VLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 367 i~~~--------------ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
|.++ ....+++||++++|+.+|+|.++++||+++.|+++++|.
T Consensus 115 I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~ 171 (215)
T 2wlg_A 115 IRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLY 171 (215)
T ss_dssp EESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred EECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEEc
Confidence 9753 112234444444444444444444444444444444443
No 113
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.39 E-value=1.6e-12 Score=140.84 Aligned_cols=116 Identities=23% Similarity=0.319 Sum_probs=81.3
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEe-ceEECCCCEeCCCcEEeee--
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLE-KSYLFDNVKIEDNCEVRLS-- 370 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~-~s~i~~~v~Ig~~~~i~~~-- 370 (627)
...+.+++.||+++.|++++.|. ++.||++|.|+++|.|.+++||++|.||++|+|. ++.|++++.||+++.|.++
T Consensus 280 ~~~i~~~~~ig~~~~I~~~~~i~-~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i 358 (459)
T 4fce_A 280 NVIIEGHVILGDRVRIGTGCVLK-NCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARL 358 (459)
T ss_dssp TEEEEEEEEECTTCEECTTCEEE-SCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEE
T ss_pred CeeeccceEECCCCEECCCCEEe-ccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEE
Confidence 45556677888888888888887 5888999999999988888888888888888884 7777777777776655433
Q ss_pred ---------------eecCC-------------------cEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 371 ---------------VLSYN-------------------TGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 371 ---------------ii~~~-------------------~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
+||++ ++||++++|+.+++|.++++||++++|++|++|..
T Consensus 359 ~~~~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV~~ 432 (459)
T 4fce_A 359 GKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTR 432 (459)
T ss_dssp CTTCEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECS
T ss_pred cCCCEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEEcc
Confidence 33333 34444555555555555566666666666666654
No 114
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.37 E-value=4.7e-12 Score=121.66 Aligned_cols=52 Identities=25% Similarity=0.206 Sum_probs=48.4
Q ss_pred eEEECCCeEECCCCEEcCCcEECCCCEECCCceee----eeEECCCCEECCCcEEe
Q psy1482 300 NIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRLE 351 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I~ 351 (627)
++.||+++.|+++|.|.+++.||++|.|+++|.|. +++||++|.||++|.|.
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~ 107 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVY 107 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEE
T ss_pred eeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEE
Confidence 78999999999999999999999999999999993 49999999999999994
No 115
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.36 E-value=4.5e-12 Score=124.93 Aligned_cols=101 Identities=24% Similarity=0.401 Sum_probs=57.5
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-eeEECCCCEECCCcEEec---------eEECCCCEeCCC
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEK---------SYLFDNVKIEDN 364 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~---------s~i~~~v~Ig~~ 364 (627)
..+.+++.||+++.|++++.|++++.||++|.|+.+|.|+ +++||++|+|+++|.|.+ ++|+++|.||.+
T Consensus 98 a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~ 177 (240)
T 3r8y_A 98 AIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGAN 177 (240)
T ss_dssp CEEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTT
T ss_pred CEECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCC
Confidence 3445556666666666666666666666666666666664 567777777777776644 444554444444
Q ss_pred cEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCccc
Q psy1482 365 CEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLP 408 (627)
Q Consensus 365 ~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v 408 (627)
| +|.++++|+++|+|+.+++|..+ +++++++
T Consensus 178 ~-----------~I~~~~~Ig~~~~I~~gsvV~~~--vp~~~v~ 208 (240)
T 3r8y_A 178 V-----------VVLEGVTVGKGAVVAAGAVVTED--VPPYTVV 208 (240)
T ss_dssp C-----------EECTTCEECTTCEECTTCEECSC--BCTTEEE
T ss_pred C-----------EECCCcEECCCCEECCCCEECCC--cCCCcEE
Confidence 4 44444444444444444444443 4555544
No 116
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.35 E-value=3.1e-12 Score=138.53 Aligned_cols=74 Identities=30% Similarity=0.429 Sum_probs=56.7
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEe-ceEECCCCEeCCCcEEe
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLE-KSYLFDNVKIEDNCEVR 368 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~-~s~i~~~v~Ig~~~~i~ 368 (627)
...+.+++.||+++.|++++.|. ++.||++|.|+++|.|.+++||++|.||++|+|. ++.|++++.||+++.|.
T Consensus 277 ~~~i~~~~~Ig~~~~I~~~~~i~-~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~ 351 (456)
T 2v0h_A 277 NVIIEGNVKLGDRVKIGTGCVLK-NVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIK 351 (456)
T ss_dssp SEEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred CcEEcCCcEECCCCEECCCCEEE-eEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEe
Confidence 34455667777888888888876 7788999999999888888888888888888884 67777777666655553
No 117
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.34 E-value=1e-12 Score=125.05 Aligned_cols=101 Identities=15% Similarity=0.232 Sum_probs=64.4
Q ss_pred EECCCeEECC--CCEEcCCcEECCCCEECCCceee---eeEECCCCEECCCcEEec-eEECCCCEeCCCcEE-eeeeecC
Q psy1482 302 YLAEDVLIGK--TSVLKQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLEK-SYLFDNVKIEDNCEV-RLSVLSY 374 (627)
Q Consensus 302 ~i~~~~~i~~--~~~i~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~~-s~i~~~v~Ig~~~~i-~~~ii~~ 374 (627)
.+++++.|.+ .+.++.++.||++|.|+.+|+|. .++||++|.||++|+|.. +...+......++.+ .+++||+
T Consensus 58 ~ig~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 137 (195)
T 3nz2_A 58 HLGHKSCVQPPFHCEFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIED 137 (195)
T ss_dssp EECTTCEECSSEEESCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECT
T ss_pred hcCCCcEEcCCeEEEeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECC
Confidence 3566666766 45667778888888888888884 468999999999999943 444444444444444 2445555
Q ss_pred CcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 375 NTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 375 ~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
+|+||.+++|.+|++||++++||++++|
T Consensus 138 ~v~IG~~~~I~~gv~IG~~~vIgagsvV 165 (195)
T 3nz2_A 138 DVWIGGNVVINQGVTIGARSVVAANSVV 165 (195)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCEEcCCCEECCCCEECCCCEECCCCEE
Confidence 5555555555555555555555555443
No 118
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.32 E-value=7.8e-12 Score=123.64 Aligned_cols=96 Identities=6% Similarity=0.007 Sum_probs=66.8
Q ss_pred ceeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-----eeEECCCCEECCCcEEec---------eEECCCC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRLEK---------SYLFDNV 359 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~---------s~i~~~v 359 (627)
...+++..+|++++.|++++.|+++++|..++.|+.+|.|. +++||++|.|+++|.|.. +.||++|
T Consensus 161 gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv 240 (332)
T 3fsy_A 161 GVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRC 240 (332)
T ss_dssp TCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTC
T ss_pred CcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCC
Confidence 34455555566666666666666666666666666666663 378999999999998853 7888888
Q ss_pred EeCCCcEEeeeeecCCcEECCCcEECCCCEE
Q psy1482 360 KIEDNCEVRLSVLSYNTGVGEHSKLLNGCLL 390 (627)
Q Consensus 360 ~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii 390 (627)
.||.|+.| ++.||++|+||.|+.|..++.|
T Consensus 241 ~IGanAtI-gVtIGd~~iIGAGSVVtkdt~I 270 (332)
T 3fsy_A 241 LLGANSGL-GISLGDDCVVEAGLYVTAGTRV 270 (332)
T ss_dssp EECTTCEE-CSCBCSSCEECTTCEECTTCEE
T ss_pred EECCCCEE-eeEECCCCEECCCCEECCCCEE
Confidence 88888887 6667766666666666666555
No 119
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.31 E-value=5.9e-12 Score=136.80 Aligned_cols=71 Identities=18% Similarity=0.326 Sum_probs=47.6
Q ss_pred eecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEe-ceEECCCCEeCCCcEEe
Q psy1482 296 YRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLE-KSYLFDNVKIEDNCEVR 368 (627)
Q Consensus 296 ~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~-~s~i~~~v~Ig~~~~i~ 368 (627)
.+.+++.||+++.|++++.|+ ++.||++|.|+ ++.|.+++||++|.||++|+|. +++|++++.||+++.|.
T Consensus 288 ~i~~~~~ig~~~~I~~~~~i~-~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~ 359 (468)
T 1hm9_A 288 ILKGQTKIGAETVLTNGTYVV-DSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVK 359 (468)
T ss_dssp EEESSCEECTTCEECTTCEEE-SCEECTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEE
T ss_pred EECCCCEECCCCEECCCCEEe-ccEEeCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEe
Confidence 444556666666666666665 66677777777 7777777777777777777774 67777666666554443
No 120
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.30 E-value=6.9e-12 Score=119.46 Aligned_cols=110 Identities=18% Similarity=0.258 Sum_probs=82.2
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
.|.|||||+|.|+||. .||+|+|++|+|||+|+++.|..+|+++|+|++++..+++.+++.. ++ + .++..
T Consensus 5 ~~~~iIlA~G~~~R~g---~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~--~~---~--~~~~~ 74 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG---TPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL--DG---T--DVVVV 74 (197)
T ss_dssp EEEEEEEECCCCTTTS---SCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC--TT---S--EEEEC
T ss_pred ceEEEEECCCCcccCC---CCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc--CC---C--EEEEC
Confidence 4789999999999995 5899999999999999999999999999999999877788777654 12 3 33433
Q ss_pred -CCCcchhhhhhcccccCCc---cCCEEEEeCCee--ccccHHHHHHH
Q psy1482 97 -DGCYSFGDVMRDLDGKAVI---RNDFILVSGDVV--SNINLLSALKS 138 (627)
Q Consensus 97 -~~~~~~gdalr~l~~~~~i---~~dfll~~gD~i--~~~~l~~~l~~ 138 (627)
....|++++++. +...+ .+.+++++||.. ....+..+++.
T Consensus 75 ~~~~~g~~~~i~~--al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 75 EDVERGCAASLRV--ALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp C----CCHHHHHH--HHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCcccCHHHHHHH--HHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 334577777763 33334 245999999993 34567777765
No 121
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.29 E-value=1e-11 Score=122.04 Aligned_cols=115 Identities=14% Similarity=0.133 Sum_probs=80.0
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV 95 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~ 95 (627)
.|.|||||+|.|+||+. ..||+|+|++|+|||+|+++.|..++ +++|+|++++..+.+.+ +.. ++ ...+.++.
T Consensus 7 ~~~~iIlA~G~g~R~~~-~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~--~~--~~~v~~~~ 80 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQT-ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL--AN--HPQITVVD 80 (236)
T ss_dssp CEEEEEEECCCCGGGCC-SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG--GG--CTTEEEEE
T ss_pred ceeEEEECCcCccccCC-CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh--cC--CCCEEEEC
Confidence 47899999999999973 46999999999999999999999887 89999999875555544 332 21 01355554
Q ss_pred CCCCcchhhhhhcccccCCcc--CCEEEEeCCee-cc-ccHHHHHHHHHH
Q psy1482 96 SDGCYSFGDVMRDLDGKAVIR--NDFILVSGDVV-SN-INLLSALKSFKK 141 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i~--~dfll~~gD~i-~~-~~l~~~l~~h~~ 141 (627)
.. .+..++++. +...+. +.+++++||.. .+ ..+..+++.|..
T Consensus 81 ~~--~g~~~~i~~--al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~ 126 (236)
T 1i52_A 81 GG--DERADSVLA--GLKAAGDAQWVLVHDAARPCLHQDDLARLLALSET 126 (236)
T ss_dssp CC--SSHHHHHHH--HHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGT
T ss_pred CC--CCHHHHHHH--HHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHh
Confidence 32 355555552 222232 45888999973 33 356777766543
No 122
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.29 E-value=1.4e-11 Score=117.49 Aligned_cols=111 Identities=22% Similarity=0.309 Sum_probs=84.1
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
.|.|||||+|.|+||. .||+|+|++|+|||+|+++.+..+|+++|+|++++..+++.+++.. + ++.+.+ .+
T Consensus 5 ~~~~iIlA~G~~~R~g---~~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~--~---~~~~~~-~~ 75 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG---TPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL--D---GLDIVL-VD 75 (199)
T ss_dssp CEEEEEEESSCCTTTT---SCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC--T---TSEEEE-CC
T ss_pred ceEEEEECCCCCCCCC---CCEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc--C---CCEEEE-CC
Confidence 4789999999999996 5899999999999999999999999999999999877788777654 1 233322 23
Q ss_pred CCCcchhhhhhcccccCCc--c-CCEEEEeCCeec--cccHHHHHHH
Q psy1482 97 DGCYSFGDVMRDLDGKAVI--R-NDFILVSGDVVS--NINLLSALKS 138 (627)
Q Consensus 97 ~~~~~~gdalr~l~~~~~i--~-~dfll~~gD~i~--~~~l~~~l~~ 138 (627)
....|++++++. +...+ . +.+++++||... ...+..+++.
T Consensus 76 ~~~~g~~~~i~~--al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 76 DAGLGCSSSLKS--ALTWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CCCTTCCCHHHH--HHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CcccCHHHHHHH--HHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 344677777763 23333 2 459999999953 5567777765
No 123
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.29 E-value=9.6e-12 Score=123.96 Aligned_cols=93 Identities=10% Similarity=0.072 Sum_probs=52.0
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceee-----eeEECCCCEECCCcEEec---------eEECCCCE
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLS-----HCIIGRNCTIGSNVRLEK---------SYLFDNVK 360 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~---------s~i~~~v~ 360 (627)
..+++..++++++.|+++++|+++++|+.++.||++|.|. +++||++|.|+++|.|.. +.||++|.
T Consensus 185 v~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~ 264 (347)
T 3r5d_A 185 VRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCL 264 (347)
T ss_dssp EEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTTCE
T ss_pred cEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCCCE
Confidence 3444444444444555555554444444445555554442 378888888888888843 56677777
Q ss_pred eCCCcEEeeeeecCCcEECCCcEECCCC
Q psy1482 361 IEDNCEVRLSVLSYNTGVGEHSKLLNGC 388 (627)
Q Consensus 361 Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ 388 (627)
||.|+.| ++.||++|+||.|+.|..++
T Consensus 265 IGAnAtI-GVtIGd~~iIGAGSVVtkdt 291 (347)
T 3r5d_A 265 IGANAGI-GIPLGDRNIVEAGLYITAGT 291 (347)
T ss_dssp ECTTCEE-CSCBCTTCEECTTCEECTTC
T ss_pred ECCCCEE-eeEECCCCEECCCCEECCCC
Confidence 7666666 44444444444444444433
No 124
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.29 E-value=9.7e-12 Score=127.86 Aligned_cols=137 Identities=10% Similarity=0.084 Sum_probs=77.3
Q ss_pred eeeecCC--hhhHHHHhHHHhhccc---CC---CCCCc-eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCC-ceee
Q psy1482 265 YGISVKD--WPSYQIASRDIVQRWV---HP---FVPSY-KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGEN-TQLS 334 (627)
Q Consensus 265 ~~~~V~s--~~~y~~a~~dil~~~~---~~---~~~~~-~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~-~~I~ 334 (627)
+|.+.+. |..|.....++..+.. .. ..|.. .+.. -+.++.|++++.|++++.||++|.|+++ +.|+
T Consensus 171 ~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~----p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig 246 (387)
T 2rij_A 171 AWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHII----PEDNTRILESSKVRMGASLAAGTTIMPGASYVN 246 (387)
T ss_dssp EEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCC----CCTTCEESCGGGBBTTCBCCTTCEECSSSCEEC
T ss_pred eeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhcccc----CCCCEEEcCCCEECCCeEEcCCCEEeCCeeEEC
Confidence 8888877 6777777777664321 11 11211 0110 0123444444444444444444444443 4443
Q ss_pred -eeE-ECCCCEECCCcEE-eceEECCCCEeCCCcEEe----e-----eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 335 -HCI-IGRNCTIGSNVRL-EKSYLFDNVKIEDNCEVR----L-----SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 335 -~s~-Ig~~~~Ig~~~~I-~~s~i~~~v~Ig~~~~i~----~-----~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
++. ||+ |.|+. +| .+++||++|.|+.++.|. + ++||++|+||.++. .|++||++++||++++|
T Consensus 247 ~nv~vIG~-~~I~~--~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~GV~IGdgavIGAGsVV 321 (387)
T 2rij_A 247 FNAGTTGA-CMVEG--RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--TGIPLGDNCIVDAGIAV 321 (387)
T ss_dssp TTCEESSC-CEECS--EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--ECSCBCTTCEECTTCEE
T ss_pred CCcEEECC-EEEee--EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--CCcEECCCCEECCCCEE
Confidence 233 555 55542 44 345666667777776543 2 67788888888777 47778888888888877
Q ss_pred CCCcccCC
Q psy1482 403 SGVKLPSA 410 (627)
Q Consensus 403 ~~~~~v~~ 410 (627)
..++.+..
T Consensus 322 t~dv~i~~ 329 (387)
T 2rij_A 322 LEGTKFLL 329 (387)
T ss_dssp CTTCEEEE
T ss_pred CCCceeee
Confidence 77776653
No 125
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.28 E-value=1.6e-11 Score=116.26 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=61.5
Q ss_pred ECC-CeEECCCCEE--cCCcEECCCCEECCCceee---eeEECCCCEECCCcEEece-EECCCCEeCCCcEEe-eeeecC
Q psy1482 303 LAE-DVLIGKTSVL--KQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLEKS-YLFDNVKIEDNCEVR-LSVLSY 374 (627)
Q Consensus 303 i~~-~~~i~~~~~i--~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~~s-~i~~~v~Ig~~~~i~-~~ii~~ 374 (627)
+++ ++.|.+.+.+ +.++.||+++.|+.+|+|. ++.||++|.||++|+|..+ ..++......++.+. +++||+
T Consensus 60 ~~~~~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 139 (190)
T 3hjj_A 60 SADGKAQINPDFRCDYGYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGN 139 (190)
T ss_dssp ESSSCCEECSSCEESSSTTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECT
T ss_pred cCCCCcEECCCEEEEeCCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECC
Confidence 455 6666666665 5678888888888888885 6789999999999999443 333333333333332 344555
Q ss_pred CcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 375 NTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 375 ~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
+|+||.+++|.+|++||++++||++++|
T Consensus 140 ~v~IG~~~~I~~gv~IG~~~vIgagsvV 167 (190)
T 3hjj_A 140 NVWVGGGAIINPGVSIGDNAVIASGAVV 167 (190)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEE
Confidence 5555555555545555555555544443
No 126
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.27 E-value=6.1e-12 Score=134.67 Aligned_cols=160 Identities=14% Similarity=0.094 Sum_probs=114.5
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccC-CeehHHHHHHHHHhCCCc-----EEEEEecC-ChHHHHHHHH-hc-ccccC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLV-NKCLLEYTLEHLHLSGIE-----EIIVFCTS-HVNQIRELVK-RK-EKSLV 87 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~-g~pli~~~l~~L~~~gi~-----~i~vv~~~-~~~~i~~~l~-~~-~~~~~ 87 (627)
.+.+||||||.||||+. ..||+|+||+ |+|+|+++++.|...|.. .++|.++. ..+.+++|++ +. .|+..
T Consensus 75 k~avViLAGGlGTRLg~-~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~fGl~ 153 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMGL-CDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWLYQV 153 (505)
T ss_dssp TEEEEEEECCCCGGGTC-CSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHHHHTT
T ss_pred cceEEEEcCCcccccCC-CCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhccCCC
Confidence 57899999999999984 8999999999 999999999999987644 56666664 5899999998 53 33311
Q ss_pred CeeEEEEeC-----------------------CCCcchhhhhhcccccCC----c---cCCEEEEeCCeecc-ccHHHHH
Q psy1482 88 GTLITLIVS-----------------------DGCYSFGDVMRDLDGKAV----I---RNDFILVSGDVVSN-INLLSAL 136 (627)
Q Consensus 88 ~~~v~~i~~-----------------------~~~~~~gdalr~l~~~~~----i---~~dfll~~gD~i~~-~~l~~~l 136 (627)
.-+|.++.| ..+.|+|++++.+....+ + .+.|+|.++|.++. .|+ .++
T Consensus 154 ~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~-~ll 232 (505)
T 2oeg_A 154 FDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK-RVL 232 (505)
T ss_dssp CCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-HHH
T ss_pred ccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-HHH
Confidence 012332211 233599999886533332 2 25699999999874 577 888
Q ss_pred HHHHHHhcCCCCceEEEEeeccCCC-CCCCCcceEEEEEC-----CCCe---------EEEeeCCC
Q psy1482 137 KSFKKINSMDSGAVALVLYKKKGQS-KSSWKEDLIVAYEC-----DSKK---------LLMHQTPQ 187 (627)
Q Consensus 137 ~~h~~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~vv~~d~-----~~~~---------vl~~~e~~ 187 (627)
.+|..+ ++.+|+.+.+...+ .++| ++..+. .+|+ |+.|.+.|
T Consensus 233 g~~~~~-----~ad~~~~v~~k~~~d~~~G----vl~~~~~~~~~~dg~~nvEyn~~~llEyse~p 289 (505)
T 2oeg_A 233 AYMEKE-----KIDFLMEVCRRTESDKKGG----HLARQTVYVKGKDGQPDAEKRVLLLRESAQCP 289 (505)
T ss_dssp HHHHHH-----TCSEEEEEEECCTTCCSSE----EEEEEEEEECCSSSCCCEEEEEEEEEEGGGSC
T ss_pred HHHHhc-----CCcEEEEEEEecCCcccee----EEEEecccccccCCccccccCceeEEEeccCC
Confidence 999887 68899988876654 4555 666632 2466 66666655
No 127
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.25 E-value=1.9e-11 Score=121.19 Aligned_cols=104 Identities=19% Similarity=0.349 Sum_probs=74.5
Q ss_pred CeEEECCCeEECCCCEEc--CCcEECCCCEECCCceee----eeEECCCCEECCCcEEece--------------EECCC
Q psy1482 299 NNIYLAEDVLIGKTSVLK--QQVVIGEGSSIGENTQLS----HCIIGRNCTIGSNVRLEKS--------------YLFDN 358 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i~--~~~~ig~~~~Ig~~~~I~----~s~Ig~~~~Ig~~~~I~~s--------------~i~~~ 358 (627)
..+++++++.|.+++.|. +++.||++|.|+++|.|. +++||++|.||++|.|.++ .+..+
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 163 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD 163 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence 457788888888888884 468999999999999997 8999999999999999664 22233
Q ss_pred CEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 359 VKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 359 v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
++||++|+ ||.+++|.++++|+++|+||.+++|..+ +++++++.
T Consensus 164 v~Igd~v~-----IG~~a~I~~gv~IG~~~~IgagsvV~~~--vp~~~~~~ 207 (252)
T 3jqy_B 164 IIISSYVW-----VGRNVSIMKGVSVGSGSVIGYGSIVTKD--VPSMCAAA 207 (252)
T ss_dssp EEECSSCE-----ECSSEEECTTCEECTTCEECTTCEECSC--BCTTEEEE
T ss_pred eEEecCcE-----ECCCCEECCCCEECCCCEECCCCEECcc--cCCCCEEE
Confidence 44444444 5555556666666666666666666654 55655543
No 128
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.25 E-value=4.3e-11 Score=124.12 Aligned_cols=196 Identities=12% Similarity=0.066 Sum_probs=137.7
Q ss_pred CCceEEEEEeCCCCCCCCcCCCCcccccc---CCeehHHHHHHHHHh-------------CCCcEEEEEecCChHHHHHH
Q psy1482 15 DEVLQAVIVTDTFNRNFFPVPEPYCLLPL---VNKCLLEYTLEHLHL-------------SGIEEIIVFCTSHVNQIREL 78 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl~~PK~Llpi---~g~pli~~~l~~L~~-------------~gi~~i~vv~~~~~~~i~~~ 78 (627)
+..+.+|+||||.||||.. ..||+|+|| .|+|++++.++.+.+ .++.-+++...+..+.+++|
T Consensus 33 ~gkvavvlLAGG~GTRLG~-~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~~~ 111 (405)
T 3oc9_A 33 QGKTALITPAGGQGSRLGF-EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEINNY 111 (405)
T ss_dssp TTCEEEEEECCSBCTTTTC-CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHHHH
T ss_pred cCceEEEEecCCCcccccC-CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHHHH
Confidence 3568899999999999976 899999999 899999999998864 46775555555678999999
Q ss_pred HHhcc-cccCCeeEEEEeC---------------------CCCcchhhhhhcccccCCcc-------CCEEEEeCCe-ec
Q psy1482 79 VKRKE-KSLVGTLITLIVS---------------------DGCYSFGDVMRDLDGKAVIR-------NDFILVSGDV-VS 128 (627)
Q Consensus 79 l~~~~-~~~~~~~v~~i~~---------------------~~~~~~gdalr~l~~~~~i~-------~dfll~~gD~-i~ 128 (627)
+++.. |+...-+|.++.| ..+.|.|++++.+....+++ +.+++.++|. +.
T Consensus 112 f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~L~ 191 (405)
T 3oc9_A 112 FKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILC 191 (405)
T ss_dssp HHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBTTC
T ss_pred HHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCccc
Confidence 98754 3322124665543 34578999988776555443 4677778899 78
Q ss_pred cccHHHHHHHHHHHhcCCCCceEEEEeeccCC-CCCCCCcceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEE
Q psy1482 129 NINLLSALKSFKKINSMDSGAVALVLYKKKGQ-SKSSWKEDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLE 207 (627)
Q Consensus 129 ~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~-~~~~~~~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~ 207 (627)
......++.+|..+ ++.+++-+.+... ..+.| +++......+|+.|.+.+.. .... .+.-.
T Consensus 192 ~~~Dp~~lg~~~~~-----~~d~~~kvv~k~~~dek~G----vl~~~dg~~~vvEysei~~e-~e~~--------~~~g~ 253 (405)
T 3oc9_A 192 KDVDPNMIGYMDLL-----QSEICIKIVKKGFKEEKVG----VLVKEQERIKVVEYTELTDE-LNKQ--------LSNGE 253 (405)
T ss_dssp CSSCHHHHHHHHHT-----TCSEEEEEEECCSTTCSCC----EEEEETTEEEEECGGGCCTT-TTCB--------CTTSC
T ss_pred ccCCHHHHHHHHHc-----CCCEEEEEEECCCCCCccc----eEEEECCeeEEEEEeeCCHH-Hhhc--------CCCCc
Confidence 88888899999886 6888887776554 36776 66643134478888887641 1110 01111
Q ss_pred EEecCCcceeeecCCchhhhhh
Q psy1482 208 ICAHLASTGIMICSPAVPPLFS 229 (627)
Q Consensus 208 ~~~~l~~~Giyi~s~~vl~~~~ 229 (627)
...+..+.++++|+.++|+.+.
T Consensus 254 l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 254 FIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp BSSCEEEEEEEEEEHHHHHHHT
T ss_pred eeeccceeEeeecCHHHHHHhh
Confidence 2345567889999999987554
No 129
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.24 E-value=1.7e-11 Score=120.40 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=66.5
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
+.|||||+|.|+||++ . ||+|+|++|+|||+|+++. ..++++|+|++++ .+.+ +.. ..+.++..
T Consensus 26 ~~aiILAgG~s~Rm~~-~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~---~~~~-~~~-------~~v~~~~~- 89 (236)
T 2px7_A 26 VSVLIPAAGNGLRLGR-G-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP---GAEP-PKG-------LGAVFLEG- 89 (236)
T ss_dssp CEEEEECCC--------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT---TCCC-CTT-------CSCEEEEC-
T ss_pred eEEEEEcCCCCccCCC-C-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH---HHHH-hhc-------CCcEEEeC-
Confidence 4599999999999985 4 9999999999999999999 7889999999985 1222 211 12445532
Q ss_pred CCcchhhhhhcccccCCcc-CCEEEEeCCe-ec-cccHHHHHHHHHHH
Q psy1482 98 GCYSFGDVMRDLDGKAVIR-NDFILVSGDV-VS-NINLLSALKSFKKI 142 (627)
Q Consensus 98 ~~~~~gdalr~l~~~~~i~-~dfll~~gD~-i~-~~~l~~~l~~h~~~ 142 (627)
..+...+++.. ...+. +.+++++||. +. ...+..+++.++..
T Consensus 90 -~~~~~~~i~~a--l~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 90 -GATRQASVARL--LEAASLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp -CSSHHHHHHHH--HHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred -CCchHHHHHHH--HHHcCCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 12334444321 11122 4488889997 33 44688888887654
No 130
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.23 E-value=3.9e-11 Score=122.78 Aligned_cols=89 Identities=16% Similarity=0.284 Sum_probs=48.6
Q ss_pred eeecCeEEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCc--------------------------
Q psy1482 295 KYRRNNIYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNV-------------------------- 348 (627)
Q Consensus 295 ~~~~~~~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~-------------------------- 348 (627)
..+.+++.|++++.|+++|.|+ ++.|++++.|+++++|.+++|+.+|.|+.++
T Consensus 78 ~~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~ 156 (334)
T 2pig_A 78 ARITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYD 156 (334)
T ss_dssp CEEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECT
T ss_pred cEEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECC
Confidence 3444555566666666666665 6666777777766666655544444433333
Q ss_pred --EEeceEECCCCEeCCCcEEeeeeecCCcEECCCcEE
Q psy1482 349 --RLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKL 384 (627)
Q Consensus 349 --~I~~s~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i 384 (627)
.|.++.|+.+|.|+.+|.|.+++|++++.|++++.+
T Consensus 157 ~a~I~~s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~V 194 (334)
T 2pig_A 157 RATVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFALI 194 (334)
T ss_dssp TCEEESCEEETTCEECTTCEEESEEECTTCEECTTCEE
T ss_pred CCEEeccEEcCCCEEcCCeEEeCcEEcCCCEECCCcEE
Confidence 333344444455555555555555555555554444
No 131
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.22 E-value=1.9e-11 Score=116.58 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=33.9
Q ss_pred CCCeEECCCCEE--cCCcEECCCCEECCCceee---eeEECCCCEECCCcEEec
Q psy1482 304 AEDVLIGKTSVL--KQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLEK 352 (627)
Q Consensus 304 ~~~~~i~~~~~i--~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~~ 352 (627)
++++.|.+.+.+ +.++.||++|.|+.+|+|. .++||++|.||++|.|..
T Consensus 58 g~~~~i~~~~~~~~g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~ 111 (199)
T 3ftt_A 58 TDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYT 111 (199)
T ss_dssp CSSEEECSSEEESSSTTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEEC
T ss_pred CCCeEEeCCEEEEecCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEec
Confidence 444445544444 4567777777777777773 468999999999998843
No 132
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.21 E-value=6.3e-11 Score=127.22 Aligned_cols=195 Identities=9% Similarity=0.010 Sum_probs=134.0
Q ss_pred CceEEEEEeCCCCCCCCcCCCCccccccC---CeehHHHHHHHHHhC--------C------CcEEEEEecCChHHHHHH
Q psy1482 16 EVLQAVIVTDTFNRNFFPVPEPYCLLPLV---NKCLLEYTLEHLHLS--------G------IEEIIVFCTSHVNQIREL 78 (627)
Q Consensus 16 ~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~---g~pli~~~l~~L~~~--------g------i~~i~vv~~~~~~~i~~~ 78 (627)
..+.+||||||.||||.. ..||+|+||+ |+|+|++.++.+.+. | +..+++...+..+.+++|
T Consensus 102 gkvavvlLaGG~GTRLg~-~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~ 180 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLGS-SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESF 180 (486)
T ss_dssp TCEEEEEEEESBCGGGTC-SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHH
T ss_pred CCeEEEEEcCCccccCCC-CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHHHH
Confidence 468999999999999964 8899999999 999999999999876 6 777766667788889999
Q ss_pred HHhcc-cccCCeeEEEEeCC----------------------CCcchhhhhhcccccCCcc-------CCEEEEeCCeec
Q psy1482 79 VKRKE-KSLVGTLITLIVSD----------------------GCYSFGDVMRDLDGKAVIR-------NDFILVSGDVVS 128 (627)
Q Consensus 79 l~~~~-~~~~~~~v~~i~~~----------------------~~~~~gdalr~l~~~~~i~-------~dfll~~gD~i~ 128 (627)
+++.. |+...-.|.++.|. .+.|+|++++.+....+++ ..+.+.+.|.+.
T Consensus 181 ~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l 260 (486)
T 2yqc_A 181 FIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCL 260 (486)
T ss_dssp HHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBTT
T ss_pred HhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCce
Confidence 98743 33222235544332 3579999988776554442 456677788754
Q ss_pred c--ccHHHHHHHHHHHhcCCCCceEEEEeecc-CCCCCCCCcceEEEEECCCC--eEEEeeCCCCCCCccccchhhhc-c
Q psy1482 129 N--INLLSALKSFKKINSMDSGAVALVLYKKK-GQSKSSWKEDLIVAYECDSK--KLLMHQTPQDNQKKVNIPMENIL-L 202 (627)
Q Consensus 129 ~--~~l~~~l~~h~~~~~~~~~~~~T~~~~~~-~~~~~~~~~~~vv~~d~~~~--~vl~~~e~~~~~~~~~~~~~~~~-~ 202 (627)
- .|. .++.+|... ++.+++.+.+. .+..+.| ++.....+| +|+.|.+++. +... .
T Consensus 261 ~~~~Dp-~~lg~~~~~-----~~~~~~~vv~k~~~~e~~G----vl~~~~~dg~~~vvEy~E~~~---------~~~~~~ 321 (486)
T 2yqc_A 261 VKVADP-IFIGFAIAK-----KFDLATKVVRKRDANESVG----LIVLDQDNQKPCVIEYSEISQ---------ELANKK 321 (486)
T ss_dssp CCTTCH-HHHHHHHHH-----TCSEEEEEEECCSTTCCCC----EEEEETTTTEEEEECGGGSCH---------HHHHCE
T ss_pred eeccCH-HHHHHHHHc-----CCCEEEEEEEcCCCCCcee----EEEEEecCCCEEEEEEecCCH---------HHhhcc
Confidence 3 343 467788776 58888877655 4445666 666542245 4778878652 1110 0
Q ss_pred CCc--EEEEecCCcceeeecCCchhhh-hhc
Q psy1482 203 YSK--LEICAHLASTGIMICSPAVPPL-FSD 230 (627)
Q Consensus 203 ~~~--~~~~~~l~~~Giyi~s~~vl~~-~~~ 230 (627)
++. -....+..++|+|+|+.+++.. +..
T Consensus 322 ~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 322 DPQDSSKLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp ETTEEEEESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred cccccccccccceeEEEEEEeHHHHHHHHHh
Confidence 111 1234567899999999999886 544
No 133
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.21 E-value=1e-10 Score=114.12 Aligned_cols=114 Identities=11% Similarity=0.187 Sum_probs=79.7
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCC-CcEEEEEecCCh-HHHHHHHHhcccccCCeeEEEE
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSG-IEEIIVFCTSHV-NQIRELVKRKEKSLVGTLITLI 94 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~g-i~~i~vv~~~~~-~~i~~~l~~~~~~~~~~~v~~i 94 (627)
.+.|||||+|.|+||.. ..||+|+|++|+|||+|+++.+..++ +++|+|++++.. +.+++++.. .+.++
T Consensus 7 ~~~aIIlAaG~g~Rmg~-~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--------~v~~v 77 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAV-GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--------RAMIV 77 (231)
T ss_dssp CEEEEEECCCCCTTTCS-SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG--------GCEEE
T ss_pred ceEEEEECCCCCccCCC-CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC--------CeEEE
Confidence 57899999999999974 57999999999999999999998874 999999998654 666666543 13444
Q ss_pred eCC--CCcchhhhhhcccccCCcc-CCEEEEeCCe--eccccHHHHHHHHHH
Q psy1482 95 VSD--GCYSFGDVMRDLDGKAVIR-NDFILVSGDV--VSNINLLSALKSFKK 141 (627)
Q Consensus 95 ~~~--~~~~~gdalr~l~~~~~i~-~dfll~~gD~--i~~~~l~~~l~~h~~ 141 (627)
... ...+...+|..+... .. +.++++.||. +..-.+..+++.++.
T Consensus 78 ~gg~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 78 AGGSNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp ECCSSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred cCCCchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 321 123344444432110 11 3367788997 334567788887764
No 134
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.21 E-value=1.7e-11 Score=123.82 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=27.0
Q ss_pred CeEEECCCeEECCCCEE--cCCcEECCCCEECCCceee-eeEECCCCEECCCcEE
Q psy1482 299 NNIYLAEDVLIGKTSVL--KQQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 299 ~~~~i~~~~~i~~~~~i--~~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I 350 (627)
.++.|++++.|++++.| +.+++||++|.||++|.|. +++||.++.|++++.+
T Consensus 162 ~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i 216 (313)
T 3q1x_A 162 TSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVI 216 (313)
T ss_dssp HCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCC
T ss_pred CCeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceE
Confidence 34556666666666666 3345555555555555543 3444444444444444
No 135
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.19 E-value=6.6e-11 Score=112.65 Aligned_cols=99 Identities=18% Similarity=0.214 Sum_probs=55.7
Q ss_pred ECCCeEECCCC--EEcCCcEECCCCEECCCceee---eeEECCCCEECCCcEEece-EECCCCEeCCCcEE-eeeeecCC
Q psy1482 303 LAEDVLIGKTS--VLKQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLEKS-YLFDNVKIEDNCEV-RLSVLSYN 375 (627)
Q Consensus 303 i~~~~~i~~~~--~i~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~~s-~i~~~v~Ig~~~~i-~~~ii~~~ 375 (627)
+++++.|.+.+ .++.++.||++|.|+.+|+|. .++||++|.||++|.|..+ ...+......+..+ .+++||++
T Consensus 58 ig~~~~I~~~~~~~~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~ 137 (203)
T 1krr_A 58 VGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNN 137 (203)
T ss_dssp CCSSCEECSCEEESCSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTT
T ss_pred cCCCcEEcCCeEEEeCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCC
Confidence 34455555543 346678888888888888885 4899999999999998533 21222222222222 23444444
Q ss_pred cEECCCcEECCCCEECCCcEECCCcE
Q psy1482 376 TGVGEHSKLLNGCLLGTGVLIGNKTC 401 (627)
Q Consensus 376 ~~Ig~~~~i~~~~ii~~~~~ig~~~~ 401 (627)
|+||.+++|.+|++||++++||++++
T Consensus 138 v~IG~~a~I~~gv~IG~~~vIgagsv 163 (203)
T 1krr_A 138 VWIGSHVVINPGVTIGDNSVIGAGSI 163 (203)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCE
T ss_pred eEECCCCEEeCCeEECCCCEECCCCE
Confidence 44444444444444444444444443
No 136
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.18 E-value=5e-11 Score=120.34 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=17.9
Q ss_pred eeecCCcEECCCcEECCCCEECCCcEECCCcEE
Q psy1482 370 SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCL 402 (627)
Q Consensus 370 ~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v 402 (627)
++||++|+||.+++|..+++||++++||++++|
T Consensus 224 ~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV 256 (313)
T 3q1x_A 224 PTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWI 256 (313)
T ss_dssp CEECSSCEECTTCEEESSCEECSSEEECTTCEE
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCCEE
Confidence 355555555555555555555555555555544
No 137
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.18 E-value=1e-10 Score=111.22 Aligned_cols=38 Identities=11% Similarity=0.234 Sum_probs=20.4
Q ss_pred ecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 372 LSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 372 i~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
++.+++||++|+|+.+|+|.++++||++++|++|++|.
T Consensus 129 ~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 166 (195)
T 3nz2_A 129 ICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVN 166 (195)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ecCCeEECCCCEEcCCCEECCCCEECCCCEECCCCEEc
Confidence 44455555555555555555555555555555555554
No 138
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.18 E-value=9.6e-11 Score=128.23 Aligned_cols=96 Identities=13% Similarity=0.248 Sum_probs=52.8
Q ss_pred CCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEee--------eeecCCc
Q psy1482 305 EDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRL--------SVLSYNT 376 (627)
Q Consensus 305 ~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~--------~ii~~~~ 376 (627)
.++.+++.+.++++++|+++|.||.++.|++++||++|.|++.++|.+++||.+|.||.+|.+.+ ++||++|
T Consensus 339 ~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~ 418 (501)
T 3st8_A 339 DGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHV 418 (501)
T ss_dssp TTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTC
T ss_pred cccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCc
Confidence 34444444555555555555555555555666666666666666666666666666666666532 4444444
Q ss_pred EECCCcEECCCCEECCCcEECCCc
Q psy1482 377 GVGEHSKLLNGCLLGTGVLIGNKT 400 (627)
Q Consensus 377 ~Ig~~~~i~~~~ii~~~~~ig~~~ 400 (627)
.||.++.|.+++.||+++.||+++
T Consensus 419 ~iG~~~~l~~~v~Ig~~~~i~ags 442 (501)
T 3st8_A 419 RTGSDTMFVAPVTIGDGAYTGAGT 442 (501)
T ss_dssp EECTTCEEESSEEECTTCEECTTC
T ss_pred EECCCCEEcCCcEECCCCEECCCC
Confidence 444444444444444444444444
No 139
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.15 E-value=8.3e-11 Score=111.10 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=34.0
Q ss_pred ECCCeEECCCCEE--cCCcEECCCCEECCCceee---eeEECCCCEECCCcEEe
Q psy1482 303 LAEDVLIGKTSVL--KQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLE 351 (627)
Q Consensus 303 i~~~~~i~~~~~i--~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~ 351 (627)
+++++.|.+.+.+ +.++.||+++.|+.+|+|. +..||++|.||++|+|.
T Consensus 59 ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~ 112 (188)
T 3srt_A 59 VGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIY 112 (188)
T ss_dssp CCSCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEE
T ss_pred cCCCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceEECCeeEECCCcEEe
Confidence 3444455554444 3567777777777777775 45899999999999883
No 140
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.13 E-value=1.2e-10 Score=109.18 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=33.1
Q ss_pred CeEECCC--CEEcCCcEECCCCEECCCceee---eeEECCCCEECCCcEEe
Q psy1482 306 DVLIGKT--SVLKQQVVIGEGSSIGENTQLS---HCIIGRNCTIGSNVRLE 351 (627)
Q Consensus 306 ~~~i~~~--~~i~~~~~ig~~~~Ig~~~~I~---~s~Ig~~~~Ig~~~~I~ 351 (627)
++.|.+. +.++.++.||++|.|+.+|+|. +++||++|.|+++|.|.
T Consensus 58 ~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~ 108 (182)
T 1ocx_A 58 EAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIY 108 (182)
T ss_dssp SEEECSCEEESSSTTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEE
T ss_pred CEEEeCCEEEEeCCCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEE
Confidence 3444444 2345667777777787777773 67899999999999985
No 141
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.13 E-value=1.2e-10 Score=109.61 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=30.4
Q ss_pred EEcCCcEECCCCEECCCcee---eeeEECCCCEECCCcEEec
Q psy1482 314 VLKQQVVIGEGSSIGENTQL---SHCIIGRNCTIGSNVRLEK 352 (627)
Q Consensus 314 ~i~~~~~ig~~~~Ig~~~~I---~~s~Ig~~~~Ig~~~~I~~ 352 (627)
.++.++.||+++.|+.+|+| ++++||++|.||++|.|..
T Consensus 70 ~~g~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~ 111 (185)
T 2p2o_A 70 DYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYT 111 (185)
T ss_dssp SCSTTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEEC
T ss_pred EecCCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEc
Confidence 34566777777888777777 4689999999999999853
No 142
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.12 E-value=3.8e-10 Score=106.81 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=16.0
Q ss_pred cCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 373 SYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 373 ~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+.+++||++|+|+.+|+|.++++||++++|+++++|.
T Consensus 132 ~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 168 (190)
T 3hjj_A 132 GKPVKIGNNVWVGGGAIINPGVSIGDNAVIASGAVVT 168 (190)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cCCeEECCCCEECCCCEECCCCEECCCCEECCCCEEC
Confidence 3334444444444444444444444444444444443
No 143
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.12 E-value=2e-10 Score=108.39 Aligned_cols=74 Identities=16% Similarity=0.234 Sum_probs=31.8
Q ss_pred eEECCCCEECCCcEEe---ceEECCCCEeCCCcEEe-------------eeeecCCcEECCCcEECCCCEECCCcEECCC
Q psy1482 336 CIIGRNCTIGSNVRLE---KSYLFDNVKIEDNCEVR-------------LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNK 399 (627)
Q Consensus 336 s~Ig~~~~Ig~~~~I~---~s~i~~~v~Ig~~~~i~-------------~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~ 399 (627)
+.||++|.|+.+|.|. ...||++|.||.+|.|. ++.++..++||++|+|+.+|+|.++++||++
T Consensus 77 ~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~ 156 (188)
T 3srt_A 77 IHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDN 156 (188)
T ss_dssp EEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECSS
T ss_pred eEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECCC
Confidence 3444444444444442 22455555555555551 1222334444444444444444444444444
Q ss_pred cEECCCcccC
Q psy1482 400 TCLSGVKLPS 409 (627)
Q Consensus 400 ~~v~~~~~v~ 409 (627)
++|+++++|.
T Consensus 157 ~vIgagsvV~ 166 (188)
T 3srt_A 157 VVIGAGSVVT 166 (188)
T ss_dssp EEECTTCEEC
T ss_pred CEECCCCEEC
Confidence 4444444443
No 144
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.11 E-value=1.7e-10 Score=109.97 Aligned_cols=10 Identities=40% Similarity=0.730 Sum_probs=4.3
Q ss_pred eEECCCCEEC
Q psy1482 336 CIIGRNCTIG 345 (627)
Q Consensus 336 s~Ig~~~~Ig 345 (627)
+.||++|.|.
T Consensus 101 v~Ig~~~~I~ 110 (199)
T 3ftt_A 101 VFIGPNCGFY 110 (199)
T ss_dssp EEECTTCEEE
T ss_pred CEECCCCEEe
Confidence 3444444443
No 145
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.11 E-value=2.9e-10 Score=109.92 Aligned_cols=109 Identities=14% Similarity=0.321 Sum_probs=67.6
Q ss_pred eEEECCCeEECCCCEEcC---CcEECCCCEECCCcee----eeeEECCCCEECCCcEEeceE---ECCCCEeCCCcEE-e
Q psy1482 300 NIYLAEDVLIGKTSVLKQ---QVVIGEGSSIGENTQL----SHCIIGRNCTIGSNVRLEKSY---LFDNVKIEDNCEV-R 368 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~~---~~~ig~~~~Ig~~~~I----~~s~Ig~~~~Ig~~~~I~~s~---i~~~v~Ig~~~~i-~ 368 (627)
.++||+++.|++++.+.+ ++.||++|.|++++.+ .+++||++|.||++|+|.++. +.+ ...+..... .
T Consensus 58 ~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~-~~~~~~~~~~~ 136 (215)
T 2wlg_A 58 TLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYS-LENGERINHGK 136 (215)
T ss_dssp EEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEE-TTTCBBCCCCC
T ss_pred EEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCccccc-ccccccccCCC
Confidence 488899999998888863 4899999999996655 578999999999999996531 000 000111111 2
Q ss_pred eeeecCCcEECCCcEECCCCEECCCcEECCCcE----ECCCcccC
Q psy1482 369 LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTC----LSGVKLPS 409 (627)
Q Consensus 369 ~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~----v~~~~~v~ 409 (627)
+++||++|+||.++.|.+|++||++++|+++++ +++++++.
T Consensus 137 ~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~~vp~~~i~~ 181 (215)
T 2wlg_A 137 DVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYKSFKEPNCVI 181 (215)
T ss_dssp CEEECTTCEECTTCEECTTCEECSSCEECTTCEECSCCCCCSCEE
T ss_pred CeEECCCcEECCCCEECCCCEECCCCEECCCCEEcCccCCCeEEE
Confidence 344455555555555554555555555555544 35555554
No 146
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.11 E-value=1.7e-10 Score=124.58 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=71.5
Q ss_pred EEECCCeEECCCCEEcCCcEECCCCEECCCceeeeeEECCC-------------------CEECCCcEEeceEECCCCEe
Q psy1482 301 IYLAEDVLIGKTSVLKQQVVIGEGSSIGENTQLSHCIIGRN-------------------CTIGSNVRLEKSYLFDNVKI 361 (627)
Q Consensus 301 ~~i~~~~~i~~~~~i~~~~~ig~~~~Ig~~~~I~~s~Ig~~-------------------~~Ig~~~~I~~s~i~~~v~I 361 (627)
++|++++.|+. +.|. +++||++|.||++|.|.++++..+ |.||++|.|.+++|+++|.|
T Consensus 331 ~~Ig~~~~I~~-~~i~-~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~I 408 (451)
T 1yp2_A 331 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARI 408 (451)
T ss_dssp EEECTTCEEEE-EEEE-SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEE
T ss_pred eEECCCCEEcc-eEEe-ccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEE
Confidence 44555555543 4444 899999999999999998777666 99999999999999999999
Q ss_pred CCCcEEee-eeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcc
Q psy1482 362 EDNCEVRL-SVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKL 407 (627)
Q Consensus 362 g~~~~i~~-~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~ 407 (627)
|.||.|.+ +.+....+||++++|+.++ ++||+++.|++|++
T Consensus 409 G~~~~i~~~~~~~~~~~ig~~~~ig~~~-----v~Ig~~a~i~agsv 450 (451)
T 1yp2_A 409 GDNVKIINKDNVQEAARETDGYFIKSGI-----VTVIKDALIPSGII 450 (451)
T ss_dssp CTTCEECCSSCCSCEEEGGGTEEEETTE-----EEECTTCEECTTCB
T ss_pred CCCCEEeCCcccccCceeCCCEEEcCCE-----EEECCCcEECCCcc
Confidence 99999964 3444444556555555443 34455555555444
No 147
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.11 E-value=4e-10 Score=107.19 Aligned_cols=38 Identities=16% Similarity=0.368 Sum_probs=18.1
Q ss_pred ecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 372 LSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 372 i~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
++.+++||++++|+.+|+|.++++||++++|++|++|.
T Consensus 128 ~~~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV~ 165 (203)
T 1krr_A 128 YSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVT 165 (203)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eCCCcEECCCeEECCCCEEeCCeEECCCCEECCCCEEC
Confidence 33444444444444444444444444444444444443
No 148
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.10 E-value=1.5e-10 Score=123.73 Aligned_cols=90 Identities=18% Similarity=0.297 Sum_probs=77.4
Q ss_pred EcCCcEECCCCEECC-----CceeeeeEECCCCEECCCcEEeceEECCCCEeCCCcEEeeeeecCCcEECCCcEECCCCE
Q psy1482 315 LKQQVVIGEGSSIGE-----NTQLSHCIIGRNCTIGSNVRLEKSYLFDNVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCL 389 (627)
Q Consensus 315 i~~~~~ig~~~~Ig~-----~~~I~~s~Ig~~~~Ig~~~~I~~s~i~~~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~i 389 (627)
+.+.+.+++++.|++ ++.+.++.||++|.| .++.|.+|+||++|+||.+|.|.+|+|+++|+||+++.|. +|+
T Consensus 299 i~~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~-~~~ 376 (420)
T 3brk_X 299 IWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHAQLS-NVV 376 (420)
T ss_dssp CCCCCCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTCEEE-EEE
T ss_pred eeeccccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCCEEe-ceE
Confidence 334444555555554 888899999999999 8999999999999999999999999999999999999998 599
Q ss_pred ECCCcEECCCcEECCCc
Q psy1482 390 LGTGVLIGNKTCLSGVK 406 (627)
Q Consensus 390 i~~~~~ig~~~~v~~~~ 406 (627)
||+++.||++++|.+..
T Consensus 377 ig~~~~i~~~~~i~~~~ 393 (420)
T 3brk_X 377 IDHGVVIPEGLIVGEDP 393 (420)
T ss_dssp ECTTCEECTTCEESSCH
T ss_pred ECCCCEECCCCEEeCCC
Confidence 99999999998887643
No 149
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.09 E-value=1.3e-10 Score=112.77 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=29.9
Q ss_pred eEEECCCeEECCCCEEc-CCcEECCCCEECCCceee-eeEECCCCEECCCcEE
Q psy1482 300 NIYLAEDVLIGKTSVLK-QQVVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~-~~~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I 350 (627)
++.+++++.||+++.|+ .+..+.++|.|++++.|+ +++||++|.|+++|+|
T Consensus 29 ~~v~~~~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i 81 (220)
T 4hur_A 29 PTITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTF 81 (220)
T ss_dssp GGCCSTTEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEE
T ss_pred ceEECCCEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCCEE
Confidence 34445555555555552 123334466666666665 3677777777777775
No 150
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.08 E-value=8.7e-11 Score=111.99 Aligned_cols=105 Identities=15% Similarity=0.198 Sum_probs=75.8
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD 97 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~ 97 (627)
|.|||||||.|+||.+ ||+|+|++|+|||+|+++.|..+ +++|++++..+.+.+++. . .+ ++..+
T Consensus 3 ~~~iIlAgG~g~Rmg~---~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~---~-----~~-~v~~~ 67 (197)
T 3d5n_A 3 IGVIILAAGEGKRFGG---DKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM---D-----QI-VIYNP 67 (197)
T ss_dssp EEEEEECSCCTTCCCS---SGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT---T-----SC-EEECT
T ss_pred eEEEEECCcCcccCCC---CeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc---C-----CE-EEECC
Confidence 6899999999999973 89999999999999999999877 888999877666655543 1 23 44433
Q ss_pred -CCcchhhhhhcccccCCcc--CCEEEEeCCe-ecc-ccHHHHHHHH
Q psy1482 98 -GCYSFGDVMRDLDGKAVIR--NDFILVSGDV-VSN-INLLSALKSF 139 (627)
Q Consensus 98 -~~~~~gdalr~l~~~~~i~--~dfll~~gD~-i~~-~~l~~~l~~h 139 (627)
...|++++++. +...+. +.+++++||. +.+ ..+..+++.+
T Consensus 68 ~~~~G~~~si~~--al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 68 FWNEGISTSLKL--GLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp TGGGCHHHHHHH--HHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CCCCCHHHHHHH--HHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 23577776663 222333 4589999998 333 4566666644
No 151
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.06 E-value=2.1e-10 Score=111.22 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=23.4
Q ss_pred ecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 372 LSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 372 i~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
+..+++||++|+|+.+|+|.++++||+++.|+++++|..
T Consensus 116 ~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~ 154 (220)
T 4hur_A 116 LKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 154 (220)
T ss_dssp CCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred ccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcc
Confidence 344555666666666666666666666666666666653
No 152
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.06 E-value=6.3e-10 Score=112.04 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=7.3
Q ss_pred eEEECCCeEECCCCEE
Q psy1482 300 NIYLAEDVLIGKTSVL 315 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i 315 (627)
++.|++++.|++++.|
T Consensus 190 gv~I~p~a~IG~~v~I 205 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTI 205 (310)
T ss_dssp SCEECTTCEECSSCEE
T ss_pred CcEECCCCEECCCcEE
Confidence 3444444444444444
No 153
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.05 E-value=3.9e-10 Score=107.81 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=75.5
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
.|.|||||+|.|+||+ ..||+|+|++|+|||+|+++.|. .++++|+|++++..+.+. . ++ + .++..
T Consensus 6 ~~~~iILAgG~s~Rmg--~~~K~ll~i~G~pli~~~l~~l~-~~~~~ivvv~~~~~~~~~----~--~~---~--~~v~~ 71 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG--GVDKGLLELNGKPLWQHVADALM-TQLSHVVVNANRHQEIYQ----A--SG---L--KVIED 71 (201)
T ss_dssp SEEEEEECCCCCSSSC--SSCGGGSEETTEEHHHHHHHHHH-HHCSCEEEECSSSHHHHH----T--TS---C--CEECC
T ss_pred cceEEEEcCCCCCcCC--CCCCceeeECceeHHHHHHHHHH-hhCCEEEEEcCCcHHHHh----h--cC---C--eEEec
Confidence 3789999999999997 36899999999999999999998 469999999987654332 1 22 3 34433
Q ss_pred CCC--cchhhhhhcccccCCcc-CCEEEEeCCe--eccccHHHHHHH
Q psy1482 97 DGC--YSFGDVMRDLDGKAVIR-NDFILVSGDV--VSNINLLSALKS 138 (627)
Q Consensus 97 ~~~--~~~gdalr~l~~~~~i~-~dfll~~gD~--i~~~~l~~~l~~ 138 (627)
... .|.+.+++. +...+. +.++++.||+ +....+..+++.
T Consensus 72 ~~~~~~G~~~si~~--~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 72 SLADYPGPLAGMLS--VMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp CTTCCCSHHHHHHH--HHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCCCCCCHHHHHHH--HHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 222 567776663 222233 4599999999 344456666653
No 154
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.01 E-value=9.2e-10 Score=109.34 Aligned_cols=14 Identities=7% Similarity=0.216 Sum_probs=8.7
Q ss_pred eeecCCchhhhhhc
Q psy1482 217 IMICSPAVPPLFSD 230 (627)
Q Consensus 217 iyi~s~~vl~~~~~ 230 (627)
+|-..|+++.++.+
T Consensus 93 ~~~~~p~i~~~~~~ 106 (287)
T 3mc4_A 93 MLEANPEWSHVLRV 106 (287)
T ss_dssp HHHHCTTHHHHHHH
T ss_pred HHHhCHHHHHHHHH
Confidence 45556677776655
No 155
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.99 E-value=1.2e-09 Score=108.51 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=7.4
Q ss_pred eEEECCCeEECCCCEEc
Q psy1482 300 NIYLAEDVLIGKTSVLK 316 (627)
Q Consensus 300 ~~~i~~~~~i~~~~~i~ 316 (627)
++.|++++.|++++.|+
T Consensus 164 gi~I~p~a~IG~~v~I~ 180 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLD 180 (287)
T ss_dssp CCEECTTCEECSSCEEE
T ss_pred CeEECCCCEECCCeEEc
Confidence 33444444444444443
No 156
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.99 E-value=1.5e-09 Score=101.58 Aligned_cols=11 Identities=18% Similarity=0.147 Sum_probs=3.9
Q ss_pred CCCCEeCCCcE
Q psy1482 356 FDNVKIEDNCE 366 (627)
Q Consensus 356 ~~~v~Ig~~~~ 366 (627)
|++|.|+.+|.
T Consensus 96 G~~v~Ig~~v~ 106 (182)
T 1ocx_A 96 GDNCMLAPGVH 106 (182)
T ss_dssp CTTCEECTTCE
T ss_pred cCCcEEeCCcE
Confidence 33333333333
No 157
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.99 E-value=1.1e-09 Score=112.67 Aligned_cols=95 Identities=8% Similarity=0.097 Sum_probs=49.5
Q ss_pred ceeecCeEEECCCeEECCCCEEcCC-cEECCCCE-ECCCceee-----eeEECCCCEECCCcEEec---------eEECC
Q psy1482 294 YKYRRNNIYLAEDVLIGKTSVLKQQ-VVIGEGSS-IGENTQLS-----HCIIGRNCTIGSNVRLEK---------SYLFD 357 (627)
Q Consensus 294 ~~~~~~~~~i~~~~~i~~~~~i~~~-~~ig~~~~-Ig~~~~I~-----~s~Ig~~~~Ig~~~~I~~---------s~i~~ 357 (627)
...+.+++.|+.++.|++++.|+++ ++|+.++. ||+ |.|. +++||++|.|+.++.|.. ++||+
T Consensus 217 gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~nv~vIG~-~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGd 295 (387)
T 2rij_A 217 NTRILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGA-CMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGK 295 (387)
T ss_dssp TCEESCGGGBBTTCBCCTTCEECSSSCEECTTCEESSC-CEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECT
T ss_pred CEEEcCCCEECCCeEEcCCCEEeCCeeEECCCcEEECC-EEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeC
Confidence 3445555556666666666666664 66666666 666 5553 355555555555554321 34444
Q ss_pred CCEeCCCcEEeeeeecCCcEECCCcEECCCCEECCCcEE
Q psy1482 358 NVKIEDNCEVRLSVLSYNTGVGEHSKLLNGCLLGTGVLI 396 (627)
Q Consensus 358 ~v~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~ii~~~~~i 396 (627)
+|.||.+|. .+++||++|+|+.|++|..++.+
T Consensus 296 nv~IGagAv-------~GV~IGdgavIGAGsVVt~dv~i 327 (387)
T 2rij_A 296 ACLLGANSV-------TGIPLGDNCIVDAGIAVLEGTKF 327 (387)
T ss_dssp TCEECTTCE-------ECSCBCTTCEECTTCEECTTCEE
T ss_pred CCEECCCCc-------CCcEECCCCEECCCCEECCCcee
Confidence 444444444 34444444444444444444444
No 158
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.98 E-value=1.9e-09 Score=101.28 Aligned_cols=15 Identities=33% Similarity=0.558 Sum_probs=6.2
Q ss_pred cEECCCCEECCCcee
Q psy1482 319 VVIGEGSSIGENTQL 333 (627)
Q Consensus 319 ~~ig~~~~Ig~~~~I 333 (627)
+.||++|.|+++|.|
T Consensus 95 i~IG~~v~Ig~~v~I 109 (185)
T 2p2o_A 95 VRIGDHCFIGPGVHI 109 (185)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEECCCcEEeCCCEE
Confidence 344444444444433
No 159
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=98.94 E-value=4.5e-10 Score=107.36 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=70.9
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEe-
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIV- 95 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~- 95 (627)
.+.|||||+|.|+||+ .||+|+|++|+|||+|+++.|..+ +++|+|++++... +++. .+.++.
T Consensus 14 ~~~~iILA~G~g~Rmg---~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~---------~~~~v~~ 77 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG---EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK---FSFL---------NAPVVLD 77 (201)
T ss_dssp CCEEEEEEESSCCCCS---TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG---------TCCEEEC
T ss_pred CceEEEECCCCCccCC---CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC---------CceEEec
Confidence 3589999999999997 689999999999999999999988 9999999987543 2221 133444
Q ss_pred CCCCcchhhhhhcccccCCcc-CCEEEEeCCee
Q psy1482 96 SDGCYSFGDVMRDLDGKAVIR-NDFILVSGDVV 127 (627)
Q Consensus 96 ~~~~~~~gdalr~l~~~~~i~-~dfll~~gD~i 127 (627)
+....|++++++. +...+. +.+++++||+.
T Consensus 78 ~~~~~g~~~~i~~--al~~~~~~~~lv~~~D~P 108 (201)
T 2e8b_A 78 EFEESASIIGLYT--ALKHAKEENVFVLSGDLP 108 (201)
T ss_dssp CCSSCCHHHHHHH--HHHHCSSSEEEEEETTCT
T ss_pred CCCCCCcHHHHHH--HHHHcCCCCEEEEeCCcC
Confidence 3345688888773 233333 56999999984
No 160
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.93 E-value=3e-09 Score=104.96 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=25.0
Q ss_pred cCCEE--EEeCCeeccccHHHHHHHHHHHh
Q psy1482 116 RNDFI--LVSGDVVSNINLLSALKSFKKIN 143 (627)
Q Consensus 116 ~~dfl--l~~gD~i~~~~l~~~l~~h~~~~ 143 (627)
.+++| ++++|++...+|..++.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47788 88999999999999999999885
No 161
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.92 E-value=2.8e-09 Score=107.34 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=17.1
Q ss_pred ECCCeEECCCCEEcCCcEE--CCCCEECCCcee
Q psy1482 303 LAEDVLIGKTSVLKQQVVI--GEGSSIGENTQL 333 (627)
Q Consensus 303 i~~~~~i~~~~~i~~~~~i--g~~~~Ig~~~~I 333 (627)
...++.|++++.|++++.| |.++.||++|+|
T Consensus 187 ~~~gv~I~p~a~IG~~v~I~hg~gvvIG~~~~I 219 (310)
T 3f1x_A 187 SETGIDIHPGAQIGHHFTIDHGTGVVIGATSII 219 (310)
T ss_dssp HHHSCEECTTCEECSSCEEESCTTCEECTTCEE
T ss_pred ccCCcEECCCCEECCCcEECCCCCeEECCceEE
Confidence 3455666666666666666 455555555433
No 162
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.92 E-value=5.6e-09 Score=103.06 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=7.7
Q ss_pred eEECCCCEECCCcEEe
Q psy1482 336 CIIGRNCTIGSNVRLE 351 (627)
Q Consensus 336 s~Ig~~~~Ig~~~~I~ 351 (627)
++||++|+|+++++|+
T Consensus 164 ~~IG~~v~I~~gvtig 179 (267)
T 1ssq_A 164 SVIENDVSILQGVTLG 179 (267)
T ss_dssp CEECTTCEECTTCEEE
T ss_pred eEECCCCEEcCCcEEC
Confidence 3444555555555443
No 163
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.89 E-value=5e-09 Score=104.26 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=25.4
Q ss_pred cCCEE--EEeCCeeccccHHHHHHHHHHHh
Q psy1482 116 RNDFI--LVSGDVVSNINLLSALKSFKKIN 143 (627)
Q Consensus 116 ~~dfl--l~~gD~i~~~~l~~~l~~h~~~~ 143 (627)
.+++| ++++|++...+|..+|.+|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47889 99999999999999999999875
No 164
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=98.89 E-value=6.5e-09 Score=99.61 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=71.2
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC-
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS- 96 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~- 96 (627)
|.|||||||.|+||. .||+|+|++|+|||+|+++.|..+ +|+|++++ .+++..+... ++ +.++..
T Consensus 1 m~aiILAgG~s~Rmg---~~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~-~~~~~~~~~~--~~-----~~~v~d~ 66 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG---MEKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRD-EKQAEKLSSR--YE-----AEFIWDL 66 (208)
T ss_dssp CEEEEECCCCCTTTT---SCGGGCEETTEEHHHHHHHHHTTS---EEEEECSS-HHHHHHHHTT--SC-----SCEECCT
T ss_pred CEEEEECCCchhhCC---CCCcccEECCeeHHHHHHHHhcCC---CEEEEECC-HHHHHHHHHh--cC-----CeEEecC
Confidence 789999999999997 589999999999999999999877 89888874 4555443322 22 333432
Q ss_pred CCCcchhhhhhcccccCCccCCEEEEeCCee-cc-ccHHHHHHHHHH
Q psy1482 97 DGCYSFGDVMRDLDGKAVIRNDFILVSGDVV-SN-INLLSALKSFKK 141 (627)
Q Consensus 97 ~~~~~~gdalr~l~~~~~i~~dfll~~gD~i-~~-~~l~~~l~~h~~ 141 (627)
....|...+++. +...+ .+.+++.||+- .+ -.+..+++.+..
T Consensus 67 ~~~~G~~~si~~--gl~~~-~~~vv~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 67 HKGVGSIAGIHA--ALRHF-GSCVVAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp TCCCSHHHHHHH--HHHHH-SSEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHH--HHHHc-CCCEEEECCccCCCHHHHHHHHHHhhc
Confidence 122233344442 22222 44449999983 33 456777776654
No 165
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.88 E-value=9.1e-09 Score=102.41 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=7.6
Q ss_pred EEECCCeEECCCCEEc
Q psy1482 301 IYLAEDVLIGKTSVLK 316 (627)
Q Consensus 301 ~~i~~~~~i~~~~~i~ 316 (627)
+.|++++.|++++.|+
T Consensus 158 ~~I~p~a~IG~gv~I~ 173 (289)
T 1t3d_A 158 VDIHPAAKIGRGIMLD 173 (289)
T ss_dssp CEECTTCEECSSCEEC
T ss_pred eEEcCCCEEcCCEEEC
Confidence 4455555444444443
No 166
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=98.82 E-value=4.4e-09 Score=109.47 Aligned_cols=109 Identities=14% Similarity=0.180 Sum_probs=76.5
Q ss_pred eEEEEEeCCCCCCCCcCCCCccccccCCeehHHHHHHHHHh-CCCcEEEEEecCChHHHHHHHHhcccccCCeeEEEEeC
Q psy1482 18 LQAVIVTDTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHL-SGIEEIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVS 96 (627)
Q Consensus 18 ~~aVIlA~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~-~gi~~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~ 96 (627)
+.|||||+|.|+||.. ..||+|+|++|+|||+|+++.|.. .++++|+|+++ ..+.+++++.. +.++..
T Consensus 4 i~aIILAaG~ssRmg~-~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~~---------v~~v~~ 72 (371)
T 1w55_A 4 MSLIMLAAGNSTRFNT-KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTKN---------YEFIEG 72 (371)
T ss_dssp EEEEEECCSCCTTTCS-SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCSS---------SEEEEC
T ss_pred cEEEEECCCCCccCCC-CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhCC---------CEEEeC
Confidence 6799999999999973 469999999999999999999988 68999999998 55555443321 334422
Q ss_pred CCCcchhhhhhcccccCCc-cCCEEEEeCCee--ccccHHHHHHHHHH
Q psy1482 97 DGCYSFGDVMRDLDGKAVI-RNDFILVSGDVV--SNINLLSALKSFKK 141 (627)
Q Consensus 97 ~~~~~~gdalr~l~~~~~i-~~dfll~~gD~i--~~~~l~~~l~~h~~ 141 (627)
..+..++++. +...+ .+.++++.||.- ....+..+++.|+.
T Consensus 73 --g~g~~~sv~~--aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~ 116 (371)
T 1w55_A 73 --GDTRAESLKK--ALELIDSEFVMVSDVARVLVSKNLFDRLIENLDK 116 (371)
T ss_dssp --CSSHHHHHHH--HHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred --CCChHHHHHH--HHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 2233344442 22223 345889999973 34467777776643
No 167
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.78 E-value=1.2e-08 Score=98.21 Aligned_cols=47 Identities=26% Similarity=0.466 Sum_probs=27.3
Q ss_pred ECCCeEECCCCEEcCC--cEECCCCEECCCceee-eeEECCCCEECCCcEE
Q psy1482 303 LAEDVLIGKTSVLKQQ--VVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 303 i~~~~~i~~~~~i~~~--~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I 350 (627)
+++++.||+++.++.+ +.+ +++.|..++.|+ +++||++|.|+++|+|
T Consensus 31 ~~~~i~IG~~t~i~~~~~~~~-~~~vi~~~~~i~~~v~IG~~~~I~~gv~I 80 (219)
T 4e8l_A 31 TNENILVGEYSYYDSKRGESF-EDQVLYHYEVIGDKLIIGRFCSIGPGTTF 80 (219)
T ss_dssp CSSSEEECTTCEEECSSSCCG-GGGEESCCTTTCCCEEECSSCEECTTCEE
T ss_pred ECCCEEECCccEEcCCcCcee-cceEEeecceeCCCEEECCCCEEcCCCEE
Confidence 3344444444444332 222 345555555554 5788888888888887
No 168
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.78 E-value=6.2e-09 Score=100.19 Aligned_cols=16 Identities=38% Similarity=0.746 Sum_probs=11.5
Q ss_pred eeEECCCCEECCCcEE
Q psy1482 335 HCIIGRNCTIGSNVRL 350 (627)
Q Consensus 335 ~s~Ig~~~~Ig~~~~I 350 (627)
++.||++|.|+++|+|
T Consensus 58 ~v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 58 KLVIGSFCSIGSGAVF 73 (212)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 5677777777777766
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.76 E-value=9.6e-09 Score=98.29 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=57.9
Q ss_pred CCeEECCCCEEcCC--cEECCCCEECCCceee-eeEECCCCEECCCcEEec---eE-----ECCCCEeCCCc----EE-e
Q psy1482 305 EDVLIGKTSVLKQQ--VVIGEGSSIGENTQLS-HCIIGRNCTIGSNVRLEK---SY-----LFDNVKIEDNC----EV-R 368 (627)
Q Consensus 305 ~~~~i~~~~~i~~~--~~ig~~~~Ig~~~~I~-~s~Ig~~~~Ig~~~~I~~---s~-----i~~~v~Ig~~~----~i-~ 368 (627)
+++.||+++.|+++ +.+ .++.|..++.|+ +++||++|.|+++|+|.. .. .+.++.+++++ .+ .
T Consensus 28 ~~i~IG~~~~I~~~~~~~i-~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~ 106 (209)
T 1mr7_A 28 ENVEVGEYSYYDSKNGETF-DKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLD 106 (209)
T ss_dssp TTEEECTTCEEECSSSCCG-GGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGG
T ss_pred CCeEECCCcEEcCCCceEE-eceEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccc
Confidence 45555555555443 334 556666666665 578899999999988721 11 11223344432 11 1
Q ss_pred eeeecCCcEECCCcEECCCCEECCCcEECCCcEECCCcccCC
Q psy1482 369 LSVLSYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPSA 410 (627)
Q Consensus 369 ~~ii~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~~ 410 (627)
++.+..+++||++++|+.+|+|.++++||+++.|+++++|..
T Consensus 107 ~~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~ 148 (209)
T 1mr7_A 107 QLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVK 148 (209)
T ss_dssp GSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 233444555555555655666666666666666666666553
No 170
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.73 E-value=1.5e-08 Score=97.41 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=20.2
Q ss_pred CCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 374 YNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 374 ~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
.+++||++++|+.+|+|..+++||+++.|+++++|.
T Consensus 117 g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 117 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 345555555555555555555555555555555554
No 171
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.73 E-value=2.1e-08 Score=96.45 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=18.4
Q ss_pred cCCcEECCCcEECCCCEECCCcEECCCcEECCCcccC
Q psy1482 373 SYNTGVGEHSKLLNGCLLGTGVLIGNKTCLSGVKLPS 409 (627)
Q Consensus 373 ~~~~~Ig~~~~i~~~~ii~~~~~ig~~~~v~~~~~v~ 409 (627)
+.+++||++|+|+.+|+|.++++||++++|+++++|.
T Consensus 109 ~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 109 SGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp CCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 3344444444554455555555555555555555544
No 172
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.64 E-value=2.6e-08 Score=95.29 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=22.2
Q ss_pred CeEEECCCeEECCC-------------CEEcCCcEECCCCEECCCcee
Q psy1482 299 NNIYLAEDVLIGKT-------------SVLKQQVVIGEGSSIGENTQL 333 (627)
Q Consensus 299 ~~~~i~~~~~i~~~-------------~~i~~~~~ig~~~~Ig~~~~I 333 (627)
++++||++++|+++ +.+++.+.||++|.|+++++|
T Consensus 28 ~~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I 75 (209)
T 1mr7_A 28 ENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTI 75 (209)
T ss_dssp TTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCEE
T ss_pred CCeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCCEE
Confidence 55666666666553 233455677777777777765
No 173
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.63 E-value=6.3e-08 Score=92.63 Aligned_cols=17 Identities=35% Similarity=0.739 Sum_probs=13.2
Q ss_pred eeeEECCCCEECCCcEE
Q psy1482 334 SHCIIGRNCTIGSNVRL 350 (627)
Q Consensus 334 ~~s~Ig~~~~Ig~~~~I 350 (627)
+.+.||++|.|+++|+|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 56778888888888876
No 174
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.61 E-value=1.2e-07 Score=90.60 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=22.4
Q ss_pred cCeEEECCCeEECC--------CCEE--------cCCcEECCCCEECCCcee
Q psy1482 298 RNNIYLAEDVLIGK--------TSVL--------KQQVVIGEGSSIGENTQL 333 (627)
Q Consensus 298 ~~~~~i~~~~~i~~--------~~~i--------~~~~~ig~~~~Ig~~~~I 333 (627)
.+++.+|+++.|.+ ++++ .+++.||++|.|+++|+|
T Consensus 20 ~~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 20 NPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CTTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEE
T ss_pred cCCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCEE
Confidence 45667777777664 2333 245677777777777765
No 175
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.28 E-value=7.3e-06 Score=87.18 Aligned_cols=195 Identities=9% Similarity=0.067 Sum_probs=116.5
Q ss_pred CCceEEEEEeCCCCCCCCcCCCCccccccC-CeehHHHHHHHHHhC----CC-cEEEEEecC-ChHHHHHHHHhcccccC
Q psy1482 15 DEVLQAVIVTDTFNRNFFPVPEPYCLLPLV-NKCLLEYTLEHLHLS----GI-EEIIVFCTS-HVNQIRELVKRKEKSLV 87 (627)
Q Consensus 15 ~~~~~aVIlA~g~g~R~~Pl~~PK~Llpi~-g~pli~~~l~~L~~~----gi-~~i~vv~~~-~~~~i~~~l~~~~~~~~ 87 (627)
...+-+|+||||.||||.- ..||.++|+. |++++++.++.+... |+ -..+|.++. ..+.+++|+++..|.
T Consensus 125 l~kvavvlLaGGlGTRLG~-~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~f-- 201 (528)
T 3r3i_A 125 LNKLVVVKLNGGLGTSMGC-KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHC-- 201 (528)
T ss_dssp CTTEEEEEECCCBCTTTTC-SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTTS--
T ss_pred cCceEEEEeCCCCccccCC-CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCcc--
Confidence 3568899999999999965 7899999997 899999999998764 42 345666764 578888999875542
Q ss_pred CeeEEEEeCC---------------------------CCcchhhhhhcccccCCcc-------CCEEEEeCCeecc-ccH
Q psy1482 88 GTLITLIVSD---------------------------GCYSFGDVMRDLDGKAVIR-------NDFILVSGDVVSN-INL 132 (627)
Q Consensus 88 ~~~v~~i~~~---------------------------~~~~~gdalr~l~~~~~i~-------~dfll~~gD~i~~-~~l 132 (627)
+.+|.++.|. .+.|-|+..+.+....+++ +.+.+.+.|.+.. .|.
T Consensus 202 g~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp 281 (528)
T 3r3i_A 202 RVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDL 281 (528)
T ss_dssp SCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCH
T ss_pred CCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCH
Confidence 2455555441 2356677777665555442 4577788888743 333
Q ss_pred HHHHHHHHHHhcCCCCceEEEEee-ccCCCCCCCCcceEEEEECCCCeEEEeeCCCCCCCccccchhhhccCCcEEEEec
Q psy1482 133 LSALKSFKKINSMDSGAVALVLYK-KKGQSKSSWKEDLIVAYECDSKKLLMHQTPQDNQKKVNIPMENILLYSKLEICAH 211 (627)
Q Consensus 133 ~~~l~~h~~~~~~~~~~~~T~~~~-~~~~~~~~~~~~~vv~~d~~~~~vl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (627)
. ++..+... ..++++.+.+-+. +..+..+.| +++.-...-+|+.|.+.+. +..... .-.....
T Consensus 282 ~-~Lg~~~~~-~~~~~~d~~~kVv~Kt~~dek~G----vl~~~dGk~~vvEyseip~---------e~~~~~-~g~~~f~ 345 (528)
T 3r3i_A 282 Y-ILNHLMNP-PNGKRCEFVMEVTNKTRADVKGG----TLTQYEGKLRLVEIAQVPK---------AHVDEF-KSVSKFK 345 (528)
T ss_dssp H-HHHHHSSC-SSSCCCSEEEEECCCCTTCCSSC----EEECSSSSCEEECTTSSCG---------GGTTTS-SCSSSCC
T ss_pred H-HHHHHHhc-ccccCCcEEEEEeEccccCCccc----EEEEECCeEEEEEecCCCh---------hHhhcc-CCcccCC
Confidence 2 34433322 1233555555443 333444444 4443212235667766553 111100 0011345
Q ss_pred CCcceeeecCCchhhhh
Q psy1482 212 LASTGIMICSPAVPPLF 228 (627)
Q Consensus 212 l~~~Giyi~s~~vl~~~ 228 (627)
+.++....|+-+.+..+
T Consensus 346 ~~Ntnnlw~~L~~L~~v 362 (528)
T 3r3i_A 346 IFNTNNLWISLAAVKRL 362 (528)
T ss_dssp CCEEEEEEEEHHHHHHH
T ss_pred eEEEEEEEEEHHHHHHH
Confidence 66777777777666533
No 176
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.61 E-value=0.001 Score=70.23 Aligned_cols=136 Identities=11% Similarity=0.085 Sum_probs=89.0
Q ss_pred ceEEEEEeCCCCCCCCcCCCCcccccc-CCeehHHHHHHHHHhC----CC-cEEEEEecC-ChHHHHHHHHhcccc-cCC
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPL-VNKCLLEYTLEHLHLS----GI-EEIIVFCTS-HVNQIRELVKRKEKS-LVG 88 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi-~g~pli~~~l~~L~~~----gi-~~i~vv~~~-~~~~i~~~l~~~~~~-~~~ 88 (627)
.+-+|+||||.||||.- ..||.++|+ .|+++++..++.+... |+ =..+|.++. ..+..++|+++..|. ...
T Consensus 76 kvavvlLaGGlGTRLG~-~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~ 154 (484)
T 3gue_A 76 QAVVLKLNGGLGTGMGL-NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTLYEVF 154 (484)
T ss_dssp TEEEEEEECCCCGGGTC-SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHHHTTC
T ss_pred hcEEEEEcCCcccccCC-CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcccCCCc
Confidence 57789999999999964 789999999 6899999999998653 32 345777775 578888999875431 111
Q ss_pred eeEEEEeCC-----------------------CCcchhhhhhcccccCCcc-------CCEEEEeCCeeccccHHHHHHH
Q psy1482 89 TLITLIVSD-----------------------GCYSFGDVMRDLDGKAVIR-------NDFILVSGDVVSNINLLSALKS 138 (627)
Q Consensus 89 ~~v~~i~~~-----------------------~~~~~gdalr~l~~~~~i~-------~dfll~~gD~i~~~~l~~~l~~ 138 (627)
-+|.++.|. .+.|-|+..+.|....+++ +.+.+.+.|.+...-=-.++-+
T Consensus 155 ~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~lG~ 234 (484)
T 3gue_A 155 DSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRLLDY 234 (484)
T ss_dssp CCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHHHHH
T ss_pred cceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHHHHH
Confidence 123333221 2257777777665555442 4678888898654322445666
Q ss_pred HHHHhcCCCCceEEEEeecc
Q psy1482 139 FKKINSMDSGAVALVLYKKK 158 (627)
Q Consensus 139 h~~~~~~~~~~~~T~~~~~~ 158 (627)
+... ++.+.+-+.+.
T Consensus 235 ~~~~-----~~d~~~kvv~K 249 (484)
T 3gue_A 235 MHEK-----QLGFLMEVCRR 249 (484)
T ss_dssp HHHT-----TCSEEEEEEEC
T ss_pred HHhc-----CCCEEEEEEEC
Confidence 6554 56666655443
No 177
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=96.73 E-value=0.0057 Score=66.35 Aligned_cols=141 Identities=11% Similarity=0.107 Sum_probs=91.1
Q ss_pred ceEEEEEeCCCCCCCCcCCCCccccccC---CeehHHHHHHHHHh-CCC-cEEEEEecC-ChHHHHHHHHhcccccCCee
Q psy1482 17 VLQAVIVTDTFNRNFFPVPEPYCLLPLV---NKCLLEYTLEHLHL-SGI-EEIIVFCTS-HVNQIRELVKRKEKSLVGTL 90 (627)
Q Consensus 17 ~~~aVIlA~g~g~R~~Pl~~PK~Llpi~---g~pli~~~l~~L~~-~gi-~~i~vv~~~-~~~~i~~~l~~~~~~~~~~~ 90 (627)
.+-+|+||||.||||.- ..||.+||+. |++++++.++.+.+ .|+ -..+|.++. ..+.+.+|+++ ++....+
T Consensus 114 kvavvllaGGlGTRLG~-~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~--fgl~~~~ 190 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLGY-SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE--LQLEVPN 190 (630)
T ss_dssp GEEEEEECCCEEGGGTE-EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH--TTCCCTT
T ss_pred hceEEEecCCcccccCC-CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH--hCCCccc
Confidence 57789999999999875 7899999997 99999999999875 342 345677774 57888999987 4433344
Q ss_pred EEEEeCC----------------------CCcchhhhhhcccccC------------------Ccc-------CCEEEEe
Q psy1482 91 ITLIVSD----------------------GCYSFGDVMRDLDGKA------------------VIR-------NDFILVS 123 (627)
Q Consensus 91 v~~i~~~----------------------~~~~~gdalr~l~~~~------------------~i~-------~dfll~~ 123 (627)
|.++.|. .+.|-|+..+.|.... +++ ..+.+.+
T Consensus 191 V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~ 270 (630)
T 3ogz_A 191 LHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQ 270 (630)
T ss_dssp EEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEEC
T ss_pred EEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEc
Confidence 5555431 1246677666665444 432 3566677
Q ss_pred CCeec-cccHHHHHHHHHHHhcCCCCceEEEEeeccCCCCCCC
Q psy1482 124 GDVVS-NINLLSALKSFKKINSMDSGAVALVLYKKKGQSKSSW 165 (627)
Q Consensus 124 gD~i~-~~~l~~~l~~h~~~~~~~~~~~~T~~~~~~~~~~~~~ 165 (627)
.|.+. ..---.++-.+..+ ++.+.+-+.+..+..+.|
T Consensus 271 vDN~L~~~~DP~~lG~~~~~-----~~d~~~kvv~r~p~E~vG 308 (630)
T 3ogz_A 271 DTNAGATITIPISLALSAEH-----SLDMNFTCIPRVPKEPIG 308 (630)
T ss_dssp TTBTTHHHHHHHHHHHHHHT-----TCSEEEEEECCCSSCSSC
T ss_pred cCCccccccCHHHhHHHHhc-----CCCEEEEEEECCCCccee
Confidence 77743 22222245555554 466655554444444544
No 178
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=95.94 E-value=0.0043 Score=58.90 Aligned_cols=105 Identities=14% Similarity=0.179 Sum_probs=68.3
Q ss_pred CceEEEEEe--CCCCCCCCcCCCCccccccCCeehHHHHHHHHHhCCCcEE-EEEecCChHHHHHHHHhcccccCCeeEE
Q psy1482 16 EVLQAVIVT--DTFNRNFFPVPEPYCLLPLVNKCLLEYTLEHLHLSGIEEI-IVFCTSHVNQIRELVKRKEKSLVGTLIT 92 (627)
Q Consensus 16 ~~~~aVIlA--~g~g~R~~Pl~~PK~Llpi~g~pli~~~l~~L~~~gi~~i-~vv~~~~~~~i~~~l~~~~~~~~~~~v~ 92 (627)
+.|.+||++ +..-|||.|. .....-...++|||+|+++.+..+++..+ ++++++.. +..+ + .+.
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~-l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~~~-----~-----~~~ 68 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPV-LSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG--LEEM-----T-----EAR 68 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTT-SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT--CSSC-----C-----SSE
T ss_pred CceEEEEEeCCCCCccccCcc-CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH--HHhh-----c-----CCE
Confidence 458899999 5556777642 11222226679999999999999999999 88887532 1111 2 245
Q ss_pred EEeCCCCcchhhhhhcccccCCccCCEEEEeCCee--ccccHHHHHH
Q psy1482 93 LIVSDGCYSFGDVMRDLDGKAVIRNDFILVSGDVV--SNINLLSALK 137 (627)
Q Consensus 93 ~i~~~~~~~~gdalr~l~~~~~i~~dfll~~gD~i--~~~~l~~~l~ 137 (627)
++.+. .|++++++..... ..+.++++.||+- ..-.+..+++
T Consensus 69 ~v~~~--~gl~~sl~~a~~~--~~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 69 VLLDE--KDLNEALNRYLKE--AEEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp EEECC--SCHHHHHHHHHHH--CCSCEEEECSCCTTCCHHHHHHHTT
T ss_pred EEECC--CCHHHHHHHHHHh--cCCCEEEEcCCcCCCCHHHHHHHHc
Confidence 56555 8889998854322 2467999999983 2334444443
No 179
>1h2v_C 80 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14 a.118.1.14 PDB: 1n52_A* 1n54_A 3fex_A 3fey_A 1h6k_A 1h2t_C* 1h2u_A*
Probab=94.67 E-value=0.19 Score=56.87 Aligned_cols=117 Identities=17% Similarity=0.228 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhccCChhhHHHHHHhhHHhcCCC--------hHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHH
Q psy1482 471 EVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVT--------VKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLP 542 (627)
Q Consensus 471 ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~--------~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (627)
.....|...++...+.++++..|+++.....-. ..-.+.+++++++... .++ ...+...+++|++
T Consensus 480 ~~a~~l~~~ir~k~~~eei~~~l~~i~~~~~~~~~~~~~~~~~~~i~v~~q~ll~~G------skS-~SH~~~~lery~~ 552 (771)
T 1h2v_C 480 SVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLA------AKS-FSHSFSALAKFHE 552 (771)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHGGGCC-------------CCHHHHHHHHHHHHHHS------TTC-HHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHhchhcccccccccccccchHHHHHHHHHHHHhc------cch-HHHHHHHHHHHHH
Confidence 345677777888888999988888854332211 1146677788888873 445 5677789999999
Q ss_pred HHHHhhcCcHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhh
Q psy1482 543 LFKNYIKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWF 597 (627)
Q Consensus 543 ll~~~~~~~~~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~ 597 (627)
+|+.++.+++.|..+|.++-.|...+++ ....++..|=..+||+-.++.+|.
T Consensus 553 ~lk~l~~~~~~q~~il~~v~~~W~~~~q---~~~ividkll~~~iv~p~~Vv~w~ 604 (771)
T 1h2v_C 553 VFKTLAESDEGKLHVLRVMFEVWRNHPQ---MIAVLVDKMIRTQIVDCAAVANWI 604 (771)
T ss_dssp HHHHHTSSHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcCCc---eEehHHHHHHhcCCCCHHHHHHHH
Confidence 9999999889999999999999988775 356777888899999999999999
No 180
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=65.01 E-value=2.6 Score=26.00 Aligned_cols=13 Identities=31% Similarity=0.836 Sum_probs=10.7
Q ss_pred hhhHHHHHHhccc
Q psy1482 607 KSVEPFVKWLLEA 619 (627)
Q Consensus 607 ~~~~~fi~WL~ea 619 (627)
++++.||+||.+.
T Consensus 9 ~aakdFv~WL~ng 21 (31)
T 3c5t_B 9 EAVRLFIEWLKNG 21 (31)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 4688999999864
No 181
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=63.11 E-value=76 Score=27.60 Aligned_cols=118 Identities=8% Similarity=0.064 Sum_probs=75.4
Q ss_pred hhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHH-
Q psy1482 466 SLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLF- 544 (627)
Q Consensus 466 ~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll- 544 (627)
+.|.+.+...|+..+.. .+.++++.-|+.+... .-.++++..++...|+.- .....+.+.++|.. ++
T Consensus 6 eel~kki~~lL~EY~~~-~D~~EA~~cl~EL~~p--~f~~e~V~~~i~~alE~~------~~~~re~~~~LL~~---L~~ 73 (152)
T 2ion_A 6 NHLVKEIDMLLKEYLLS-GDISEAEHCLKELEVP--HFHHELVYEAIVMVLEST------GESAFKMILDLLKS---LWK 73 (152)
T ss_dssp CHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHTCG--GGHHHHHHHHHHHHHHCC------SSHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHhCCC--cchHHHHHHHHHHHHcCC------ChHHHHHHHHHHHH---HHH
Confidence 36888888888888854 6788899999998654 334567666666666651 11212333333322 22
Q ss_pred HHhhcCcHHHH---HHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhh
Q psy1482 545 KNYIKNESAQQ---DCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTK 595 (627)
Q Consensus 545 ~~~~~~~~~q~---~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~ 595 (627)
.+.++..+-+. .++..+.....+-|....++..++......++|+-..+..
T Consensus 74 ~~~is~~q~~~Gf~~vl~~ldDl~lDiP~A~~~la~~v~~ai~~g~l~~~~~~~ 127 (152)
T 2ion_A 74 SSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDL 127 (152)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTCSCHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHhChHhccCccchHHHHHHHHHHHHHCCCCCHHHHHh
Confidence 12222221111 2566667777777888889999999999999999866654
No 182
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=62.48 E-value=83 Score=27.79 Aligned_cols=121 Identities=12% Similarity=0.132 Sum_probs=78.2
Q ss_pred hhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHHH
Q psy1482 466 SLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFK 545 (627)
Q Consensus 466 ~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 545 (627)
++|.+.+...|++.|.. .+.++++.-++.+.... -.+.++..++...|+.- ....+.+.++|.. |..
T Consensus 7 ee~~kk~~~ii~EYf~~-~D~~Ea~~~l~eL~~p~--~~~~~V~~~I~~aldrk-------~~ere~~s~LL~~---L~~ 73 (165)
T 2rg8_A 7 RAFEKTLTPIIQEYFEH-GDTNEVAEMLRDLNLGE--MKSGVPVLAVSLALEGK-------ASHREMTSKLLSD---LCG 73 (165)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHTCSG--GGGHHHHHHHHHHHTSC-------HHHHHHHHHHHHH---HBT
T ss_pred HHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhCCcc--cHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHH---HHH
Confidence 47999999999999865 57888999999876332 34455555555555551 1212333333332 222
Q ss_pred HhhcCcHHH---HHHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhhc
Q psy1482 546 NYIKNESAQ---QDCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFNK 599 (627)
Q Consensus 546 ~~~~~~~~q---~~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~~ 599 (627)
+.++..+-+ ..+|..+.....+.|....++..++-.+.-.++|.-..+-+=..+
T Consensus 74 ~~ls~~~i~~Gf~~lle~ldDl~iDiP~a~~~la~fiarav~d~~l~~~~l~~~~~~ 130 (165)
T 2rg8_A 74 TVMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGT 130 (165)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHTTSSCTTHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHHHhChhhcccccchHHHHHHHHHHHHHcCCCCHHHHHHHHhc
Confidence 333322222 236777777777888888889999999999999998777665554
No 183
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=54.33 E-value=74 Score=29.51 Aligned_cols=97 Identities=8% Similarity=0.167 Sum_probs=60.3
Q ss_pred ccccCCe-ehHHHHHHHHHhCCCc--EEEEEecCChHHHHHHHHhcccccCCeeEEEEeCC--------CCcchhhhhhc
Q psy1482 40 LLPLVNK-CLLEYTLEHLHLSGIE--EIIVFCTSHVNQIRELVKRKEKSLVGTLITLIVSD--------GCYSFGDVMRD 108 (627)
Q Consensus 40 Llpi~g~-pli~~~l~~L~~~gi~--~i~vv~~~~~~~i~~~l~~~~~~~~~~~v~~i~~~--------~~~~~gdalr~ 108 (627)
.+|.-|. ..|..+|+.+...... +|+|+-....+...+.++... ...++.++..+ ...|.+.|...
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~---~~~~i~~i~~~~~~~~~~~~n~G~~~a~N~ 82 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFL---NDNRVRFYQSDISGVKERTEKTRYAALINQ 82 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGG---GSTTEEEEECCCCSHHHHHSSCHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHh---hcCCEEEEecccccccccccccCHHHHHHH
Confidence 3455554 7899999999876543 666666655566666665521 12457778766 56777777653
Q ss_pred ccccCCccCC-EEEEeCCeecccc-HHHHHHHHHH
Q psy1482 109 LDGKAVIRND-FILVSGDVVSNIN-LLSALKSFKK 141 (627)
Q Consensus 109 l~~~~~i~~d-fll~~gD~i~~~~-l~~~l~~h~~ 141 (627)
. -...+++ ++++.+|.+...+ |..+++.+.+
T Consensus 83 g--i~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 83 A--IEMAEGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp H--HHHCCCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred H--HHHcCCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 2 2223555 5567888887654 5666666654
No 184
>4adz_A CSOR; transcription, copper sensor; 1.70A {Streptomyces lividans}
Probab=53.09 E-value=48 Score=28.20 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=30.4
Q ss_pred HHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHH
Q psy1482 474 DSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMV 512 (627)
Q Consensus 474 ~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~ 512 (627)
+.|+++++++..|.+++..|...|-|-+.-...++..=+
T Consensus 66 rGI~rMIEedr~C~DIL~QlaAVrsAL~~v~~~ILe~Hl 104 (136)
T 4adz_A 66 RGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHL 104 (136)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367789999999999999999999988755555544433
No 185
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=52.87 E-value=1e+02 Score=25.86 Aligned_cols=115 Identities=9% Similarity=0.069 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHH-H
Q psy1482 467 LFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLF-K 545 (627)
Q Consensus 467 ~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll-~ 545 (627)
+|.+.+...|++.+. ..+.++++.-|+.+... .-.++++..++...|+.- .....+.+.++|.. ++ .
T Consensus 5 el~kki~~ll~EY~~-~~D~~Ea~~cl~eL~~p--~f~~e~V~~~i~~alE~~------~~~~~e~~~~LL~~---L~~~ 72 (129)
T 2nsz_A 5 HLVKEIDMLLKEYLL-SGDISEAEHCLKELEVP--HFHHELVYEAIVMVLEST------GESAFKMILDLLKS---LWKS 72 (129)
T ss_dssp HHHHHHHHHHHHHHH-HCCHHHHHHHHHHHTCG--GGHHHHHHHHHHHHHHCC------SSHHHHHHHHHHHH---HHHT
T ss_pred HHHHHHHHHHHHHHc-CCCHHHHHHHHHHhCCC--ccHHHHHHHHHHHHHcCC------ChHHHHHHHHHHHH---HHHC
Confidence 688888888888885 46788899999988654 234567666666666651 11222333333322 22 1
Q ss_pred HhhcCcHHHH---HHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhH
Q psy1482 546 NYIKNESAQQ---DCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIV 593 (627)
Q Consensus 546 ~~~~~~~~q~---~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~i 593 (627)
++++.++-+. .++..+.....+-|....++..++......++|+-.-+
T Consensus 73 ~~is~~q~~~Gf~~v~~~l~Dl~lDiP~a~~~l~~~v~~ai~~g~l~~~~~ 123 (129)
T 2nsz_A 73 STITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLR 123 (129)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred CCcCHHHHHHHHHHHHhhChHhhcCccchHHHHHHHHHHHHHCCCCCHHHH
Confidence 2222221111 25666666677778878899999999999999987433
No 186
>2g49_C Glucagon preproprotein; protein-peptide complex, hydrolase; 2.50A {Homo sapiens} PDB: 1kx6_A 1gcn_A 1bh0_A 1nau_A
Probab=48.09 E-value=7.4 Score=23.66 Aligned_cols=12 Identities=33% Similarity=1.038 Sum_probs=9.6
Q ss_pred hhhHHHHHHhcc
Q psy1482 607 KSVEPFVKWLLE 618 (627)
Q Consensus 607 ~~~~~fi~WL~e 618 (627)
..++.||+||..
T Consensus 17 ~aak~fv~wL~~ 28 (29)
T 2g49_C 17 RRAQDFVQWLMN 28 (29)
T ss_pred HHHHHHHHHHhc
Confidence 358899999974
No 187
>2l63_A GLP-2, glucagon-like peptide 2; hormone, GPCR, docking, small bowel syndrome; NMR {Homo sapiens} PDB: 2l64_A
Probab=42.70 E-value=11 Score=23.69 Aligned_cols=13 Identities=23% Similarity=0.846 Sum_probs=10.4
Q ss_pred hhhHHHHHHhccc
Q psy1482 607 KSVEPFVKWLLEA 619 (627)
Q Consensus 607 ~~~~~fi~WL~ea 619 (627)
.+++.||+||...
T Consensus 17 ~aak~fl~wL~~~ 29 (33)
T 2l63_A 17 LAARDFINWLIQT 29 (33)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 3588999999864
No 188
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=42.60 E-value=2.2e+02 Score=30.61 Aligned_cols=113 Identities=13% Similarity=0.073 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc-CCCCCchhHHHHHHHHHhhHHHHHH
Q psy1482 467 LFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN-KPDMDMKSFHTHMMSKINYFLPLFK 545 (627)
Q Consensus 467 ~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~ 545 (627)
.-.+|+....++++..+.++++++..|+.+|.+.+.-.+++-..++..+++-.. -++- + .+.+...=.-|+.+++
T Consensus 446 dIE~ean~yfqkmY~~eisI~~iV~~L~~~K~S~~~rdqdvFaCMIh~LFdEyrff~~Y-P---~~eL~iTA~LFG~LI~ 521 (603)
T 4b8b_A 446 DIEKEMQNYLQKMYSGELAIKDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDY-P---LDALATTSVLFGSMIL 521 (603)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHGGGGGGS-C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhC-C---HHHHHHHHHHHHHHHH
Confidence 577899999999999999999999999999998888888999888899998753 1111 1 1122222223455555
Q ss_pred HhhcCcHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhh
Q psy1482 546 NYIKNESAQQDCLDAFEEFAEENESLSVVAGKLLHKLYD 584 (627)
Q Consensus 546 ~~~~~~~~q~~~l~ale~~~~~~~~~~~~~~~il~~lYd 584 (627)
+=+-+.....-+|..+-+.+.+. .-.++|.+=+++|+.
T Consensus 522 ~~Ll~~~~L~iALr~ILeAlrkp-~~skmf~FGi~ALeq 559 (603)
T 4b8b_A 522 FQLLRGFVLDVAFRIIMRFAKEP-PESKMFKFAVQAIYA 559 (603)
T ss_dssp TTSSCHHHHHHHHHHHHHHHTSC-TTSHHHHHHHHHHHH
T ss_pred HcccCcchHHHHHHHHHHHHhCC-CCCcHHHHHHHHHHH
Confidence 54444333333455555556553 223445555555543
No 189
>1jrj_A Exendin-4; Trp-CAGE, GLP-1, poly-proii, hydrophobic cluster, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=41.69 E-value=11 Score=24.59 Aligned_cols=13 Identities=31% Similarity=0.836 Sum_probs=10.5
Q ss_pred hhhHHHHHHhccc
Q psy1482 607 KSVEPFVKWLLEA 619 (627)
Q Consensus 607 ~~~~~fi~WL~ea 619 (627)
++++.||+||...
T Consensus 17 ~aak~fv~wL~~~ 29 (39)
T 1jrj_A 17 EAVRLFIEWLKNG 29 (39)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 3688999999864
No 190
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=40.36 E-value=28 Score=33.10 Aligned_cols=84 Identities=13% Similarity=0.155 Sum_probs=52.4
Q ss_pred eehHHHHHHHHHhCCCcEEEEEecCChHHH---HHHHHhcccccCCeeEEEEeCCCCcchhhhhhcccccCCc--cCCEE
Q psy1482 46 KCLLEYTLEHLHLSGIEEIIVFCTSHVNQI---RELVKRKEKSLVGTLITLIVSDGCYSFGDVMRDLDGKAVI--RNDFI 120 (627)
Q Consensus 46 ~pli~~~l~~L~~~gi~~i~vv~~~~~~~i---~~~l~~~~~~~~~~~v~~i~~~~~~~~gdalr~l~~~~~i--~~dfl 120 (627)
++|+.++++.+...+...++++.+.....+ ..++ . ..+.+..| ...|.|..|+.....-+- .+.++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-~-------~~~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vl 107 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-G-------PQHMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVV 107 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-C-------TTSEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-c-------CCcEEecC-CCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 589999999999998877777766544433 3333 1 11333433 557888887743221111 14599
Q ss_pred EEeCCe--eccccHHHHHHH
Q psy1482 121 LVSGDV--VSNINLLSALKS 138 (627)
Q Consensus 121 l~~gD~--i~~~~l~~~l~~ 138 (627)
++.+|+ +...+|..+++.
T Consensus 108 iigaD~P~L~~~~l~~a~~~ 127 (242)
T 3cgx_A 108 LMGSDIPDYPCELVQKALND 127 (242)
T ss_dssp EECSSCTTCCHHHHHHHHHH
T ss_pred EEcCCCCCCCHHHHHHHHHH
Confidence 999998 445566766654
No 191
>1t5q_A Gastric inhibitory polypeptide; GIP, molecular modelling, helix, diabetes, obesity, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=38.17 E-value=15 Score=22.58 Aligned_cols=11 Identities=45% Similarity=0.990 Sum_probs=9.1
Q ss_pred hhHHHHHHhcc
Q psy1482 608 SVEPFVKWLLE 618 (627)
Q Consensus 608 ~~~~fi~WL~e 618 (627)
.++.||+||..
T Consensus 18 ~ak~fv~wLl~ 28 (30)
T 1t5q_A 18 HQQDFVNWLLA 28 (30)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 58889999964
No 192
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=37.37 E-value=1.7e+02 Score=28.71 Aligned_cols=72 Identities=14% Similarity=0.228 Sum_probs=46.7
Q ss_pred CcHHHHHHHHHHHHHHhh--cc-----------------chHHHHHHHHHHHhhcCCCChhhHhhhhhcCC--chhHH--
Q psy1482 550 NESAQQDCLDAFEEFAEE--NE-----------------SLSVVAGKLLHKLYDKDILSEDIVTKWFNKLE--PSSLR-- 606 (627)
Q Consensus 550 ~~~~q~~~l~ale~~~~~--~~-----------------~~~~~~~~il~~lYd~dil~Ee~il~W~~~~~--~~~~~-- 606 (627)
....|.-++.-++.+... .+ +-...+...++.++....++|.-+..+|+... ++..+
T Consensus 173 d~~~k~Kvl~li~d~f~~~~~~~~~~~~~~~kR~~e~~~~~~q~w~~~~q~~iq~k~~dE~~~r~fF~~L~~ik~~~~~~ 252 (315)
T 3qml_C 173 DKQLQIKVLELISKILKADMYENDDTNLILFKRNAENWSSNLQEWANEFQEMVQNKSIDELHTRTFFDTLYNLKKIFKSD 252 (315)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTC-------------------CHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHcccccccccccccchhhhcccccCchHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHhcccc
Confidence 346677777777777631 00 11122667788899999999999999997643 33333
Q ss_pred -hhhHHHHHHhccccC
Q psy1482 607 -KSVEPFVKWLLEADE 621 (627)
Q Consensus 607 -~~~~~fi~WL~eaee 621 (627)
+-...|++||.+.-|
T Consensus 253 lK~~~~FLnWLa~E~e 268 (315)
T 3qml_C 253 ITINKGFLNWLAQQCK 268 (315)
T ss_dssp SCCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH
Confidence 335569999976543
No 193
>2b4n_A Gastric inhibitory polypeptide; GIP, molecular modelling, helix, diabetes, obesity, hormone/growth factor complex; NMR {Homo sapiens} PDB: 2l70_A 2l71_A 2obu_A 2qkh_B*
Probab=36.44 E-value=18 Score=23.92 Aligned_cols=15 Identities=33% Similarity=0.669 Sum_probs=11.9
Q ss_pred hhhHHHHHHhccccC
Q psy1482 607 KSVEPFVKWLLEADE 621 (627)
Q Consensus 607 ~~~~~fi~WL~eaee 621 (627)
++++.||+||...-.
T Consensus 17 ~~akdFv~WL~~~k~ 31 (42)
T 2b4n_A 17 IHQQDFVNWLLAQKG 31 (42)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC
Confidence 468889999987654
No 194
>3iol_B Glucagon; receptor-ligand complex, cell membrane, disulfide bond, G-PR coupled receptor, glycoprotein, membrane, receptor, transdu transmembrane; HET: 10M; 2.10A {Homo sapiens} PDB: 1d0r_A
Probab=36.20 E-value=16 Score=22.59 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.8
Q ss_pred hhhHHHHHHhcc
Q psy1482 607 KSVEPFVKWLLE 618 (627)
Q Consensus 607 ~~~~~fi~WL~e 618 (627)
+.++.||+||..
T Consensus 17 ~~ak~Fv~wL~~ 28 (31)
T 3iol_B 17 QAAKEFIAWLVK 28 (31)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHc
Confidence 468899999964
No 195
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=35.65 E-value=89 Score=28.57 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=53.9
Q ss_pred ccccCCe-ehHHHHHHHHHhCCCc--EEEEEecCCh----HHHHHHHHhcccccCCeeEEEEeCCCCcchhhhhhccccc
Q psy1482 40 LLPLVNK-CLLEYTLEHLHLSGIE--EIIVFCTSHV----NQIRELVKRKEKSLVGTLITLIVSDGCYSFGDVMRDLDGK 112 (627)
Q Consensus 40 Llpi~g~-pli~~~l~~L~~~gi~--~i~vv~~~~~----~~i~~~l~~~~~~~~~~~v~~i~~~~~~~~gdalr~l~~~ 112 (627)
.+|.-|. ..|..+|+.|...... +|+|+-.... +.++++.... ..+.++.+ ...|.+.|.... .
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~------~~i~~i~~-~n~G~~~a~N~g--~ 80 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY------PNIKVIHK-KNAGLGMACNSG--L 80 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC------SSEEEEEC-CCCCHHHHHHHH--H
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC------CCEEEEEC-CCCChHHHHHHH--H
Confidence 3444444 6889999999876443 6666654322 3334443331 23666654 457777776532 2
Q ss_pred CCccCC-EEEEeCCeecccc-HHHHHHHHHH
Q psy1482 113 AVIRND-FILVSGDVVSNIN-LLSALKSFKK 141 (627)
Q Consensus 113 ~~i~~d-fll~~gD~i~~~~-l~~~l~~h~~ 141 (627)
...+++ ++++.+|.+...+ |..+++...+
T Consensus 81 ~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 81 DVATGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp HHCCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred HHcCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 223455 5567888876655 5666666655
No 196
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=33.06 E-value=1.8e+02 Score=29.18 Aligned_cols=129 Identities=12% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCc
Q psy1482 447 SENDVDSVDGQGTPPMDDTSLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDM 526 (627)
Q Consensus 447 ~~~~~~~~~~~~~~~~dd~~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~ 526 (627)
++++++..-.+..|+.... +|.+.+...|++.|..+ +..+++..|+.+..... .+.++..++...|++ .
T Consensus 33 d~~~~~~~~~~~~p~ls~e-e~~k~~~~ii~EYf~~~-d~~Ea~~~l~eL~~p~~--~~~~v~~~I~~aLdr-------~ 101 (358)
T 3eiq_C 33 DDDQENCVYETVVLPLDET-AFEKTLTPIIQEYFEHG-DTNEVAEMLRDLNLGEM--KSGVPVLAVSLALEG-------K 101 (358)
T ss_dssp -----------------CH-HHHHHHHHHHHHHHHHC-CHHHHHHHHHTTTCCGG--GGGHHHHHHHHHTTS-------C
T ss_pred CCCCCCceeecCCCCCCHH-HHHHHHHHHHHHHhcCC-CHHHHHHHHHHhCCchh--HHHHHHHHHHHHhcC-------C
Q ss_pred hhHHHHHHHHHhhHHHHHHHhhcCcHHHHH---HHHHHHHHHhhccchHHHHHHHHHHHhhcCCCC
Q psy1482 527 KSFHTHMMSKINYFLPLFKNYIKNESAQQD---CLDAFEEFAEENESLSVVAGKLLHKLYDKDILS 589 (627)
Q Consensus 527 ~~~~~~~~~~~~~~~~ll~~~~~~~~~q~~---~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~ 589 (627)
....+.+-++|..... +.+...+-+.. +|..+.....+.|....++..++-..=-.|+|.
T Consensus 102 ~~erE~~s~LLs~L~~---~~ls~~~i~~gf~~lle~ldDl~lDiP~a~~~la~flaRaV~d~~l~ 164 (358)
T 3eiq_C 102 ASHREMTSKLLSDLCG---TVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILC 164 (358)
T ss_dssp HHHHHHHHHHHHTTTT---TSCCHHHHHHHHHHHHHTHHHHHHHCTTHHHHHHHHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHhCCCC
No 197
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=32.92 E-value=1.5e+02 Score=30.66 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=59.7
Q ss_pred ccccCCe--ehHHHHHHHHHhCCC----cEEEEEecCCh-----HHHHHHHHhcccccCCeeEEEEeCCCCcchhhhhhc
Q psy1482 40 LLPLVNK--CLLEYTLEHLHLSGI----EEIIVFCTSHV-----NQIRELVKRKEKSLVGTLITLIVSDGCYSFGDVMRD 108 (627)
Q Consensus 40 Llpi~g~--pli~~~l~~L~~~gi----~~i~vv~~~~~-----~~i~~~l~~~~~~~~~~~v~~i~~~~~~~~gdalr~ 108 (627)
.+|.-|. ..|..+|+.+...-. .+|+||-.... +.++++... + +.+|.++..+...|.+.|...
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~--~---~~~v~vi~~~~n~G~~~a~N~ 108 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK--L---KVPVHVIRMEQRSGLIRARLK 108 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHS--S---SSCEEEEECSSCCCHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHH--C---CCcEEEEECCCCCChHHHHHH
Confidence 4555565 488999999987543 37888765322 234444443 1 125788877766788877653
Q ss_pred ccccCCccCC-EEEEeCCeeccc-cHHHHHHHHHHH
Q psy1482 109 LDGKAVIRND-FILVSGDVVSNI-NLLSALKSFKKI 142 (627)
Q Consensus 109 l~~~~~i~~d-fll~~gD~i~~~-~l~~~l~~h~~~ 142 (627)
. ....+++ ++++.+|..... -|..+++.+.+.
T Consensus 109 g--~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~ 142 (472)
T 1xhb_A 109 G--AAVSRGQVITFLDAHCECTAGWLEPLLARIKHD 142 (472)
T ss_dssp H--HHHCCSSEEEEEESSEEECTTCHHHHHHHHHHC
T ss_pred H--HHhccCCeEEEECCCeEeCccHHHHHHHHHHhC
Confidence 2 2223455 666789988765 477777776653
No 198
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=28.64 E-value=4.2e+02 Score=25.80 Aligned_cols=119 Identities=11% Similarity=0.131 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHHHH
Q psy1482 467 LFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFKN 546 (627)
Q Consensus 467 ~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 546 (627)
+|.+.+...|+..|.. .+.++++..|+.+.... -.+.++..++...|+.- ....+.+-++|... ..+
T Consensus 1 e~~k~~~~ii~EYf~~-~d~~Ea~~~l~el~~p~--~~~~~v~~~i~~aldr~-------~~erE~~s~LLs~L---~~~ 67 (307)
T 2zu6_B 1 AFEKTLTPIIQEYFEH-GDTNEVAEMLRDLNLGE--MKSGVPVLAVSLALEGK-------ASHREMTSKLLSDL---CGT 67 (307)
T ss_dssp CHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCGG--GGGGHHHHHHHHHHTSC-------HHHHHHHHHHHHHH---HHH
T ss_pred ChHHHHHHHHHHHHcC-CCHHHHHHHHHHhCCcc--hHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHH---HhC
Confidence 4788888888888854 57888999999875433 45566666666666651 22223333343332 235
Q ss_pred hhcCcHHHH---HHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCChhhHhhhhh
Q psy1482 547 YIKNESAQQ---DCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSEDIVTKWFN 598 (627)
Q Consensus 547 ~~~~~~~q~---~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~Ee~il~W~~ 598 (627)
.+...+-+. .+|..+.....+.|....++..++-..=-.|+|.-..+-.-..
T Consensus 68 ~ls~~~i~~gf~~ll~~ldDl~lD~P~a~~~la~flaraV~d~~l~~~~l~~~~~ 122 (307)
T 2zu6_B 68 VMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKG 122 (307)
T ss_dssp TBCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHTTSSCTTTTGGGTT
T ss_pred CCCHHHHHHHHHHHHHhhhHhcccccchHHHHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 454443332 2566777777777877778888888888888888765555443
No 199
>2hh7_A Hypothetical protein CSOR; 4-helix bundle, unknown function; 2.55A {Mycobacterium tuberculosis}
Probab=27.59 E-value=1e+02 Score=25.58 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=34.1
Q ss_pred HHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhc
Q psy1482 474 DSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKN 520 (627)
Q Consensus 474 ~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~ 520 (627)
+.|+++++++..|.+++..|...|-|-| .+...++..=|..+.
T Consensus 24 rGI~rMIEedr~C~DIL~QlaAVrsAL~----~~~~~ILe~HL~~Cv 66 (119)
T 2hh7_A 24 DGIVRMLESDAYCVDVMKQISAVQSSLE----RANRVMLHNHLETCF 66 (119)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 4788899999999999999999999877 455555666666654
No 200
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=24.86 E-value=3.7e+02 Score=26.50 Aligned_cols=112 Identities=8% Similarity=-0.049 Sum_probs=65.6
Q ss_pred hhHHHHHHHHHHHHHhccCChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHhhHHHHHH
Q psy1482 466 SLFYTEVVDSLLRGYEEKLVCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVKNKPDMDMKSFHTHMMSKINYFLPLFK 545 (627)
Q Consensus 466 ~~F~~ev~~~l~~~~~~~~~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 545 (627)
.+|.+.+...|.+.+.. .+.++++.-++.+...+ -.++++..++...|+. .....+.+.++|.. |.+
T Consensus 8 ee~~k~~~~ll~Ey~~~-~d~~Ea~~ci~el~~p~--~~~~~v~~~i~~~le~-------~~~~re~~~~Ll~~---L~~ 74 (339)
T 1ug3_A 8 EELEKKSKAIIEEYLHL-NDMKEAVQCVQELASPS--LLFIFVRHGVESTLER-------SAIAREHMGQLLHQ---LLC 74 (339)
T ss_dssp HHHHHHHHHHHHHHHHH-CCHHHHHHHHHTTCCGG--GHHHHHHHHHHHHTTT-------CHHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHhC-CCHHHHHHHHHHcCCcc--cHHHHHHHHHHHHhCC-------CHHHHHHHHHHHHH---HHH
Confidence 36788888888888755 47788888888886543 2445554444444443 11222333333322 221
Q ss_pred -HhhcCcHHHH---HHHHHHHHHHhhccchHHHHHHHHHHHhhcCCCCh
Q psy1482 546 -NYIKNESAQQ---DCLDAFEEFAEENESLSVVAGKLLHKLYDKDILSE 590 (627)
Q Consensus 546 -~~~~~~~~q~---~~l~ale~~~~~~~~~~~~~~~il~~lYd~dil~E 590 (627)
++++.++-+. .++..+.....+-|....++..++..+...++++-
T Consensus 75 ~~~is~~~~~~Gf~~~~~~l~Dl~lDiP~a~~~La~~v~~~i~~g~l~~ 123 (339)
T 1ug3_A 75 AGHLSTAQYYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEGGVPM 123 (339)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHGGGGSTTSCCH
T ss_pred CCCCCHHHHHHHHHHHHhhChHhhcCccchHHHHHHHHHHHHHCCCCCH
Confidence 1222111111 24455555555667778889999999999999997
No 201
>2rrh_A VIP peptides; peptide hormone, hormone; NMR {Homo sapiens} PDB: 2rri_A
Probab=23.43 E-value=37 Score=20.59 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=9.5
Q ss_pred hhhHHHHHHhcc
Q psy1482 607 KSVEPFVKWLLE 618 (627)
Q Consensus 607 ~~~~~fi~WL~e 618 (627)
..++.|++||..
T Consensus 17 ~~ak~fl~~l~~ 28 (29)
T 2rrh_A 17 MAVKKYLNSILN 28 (29)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 358899999964
No 202
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.53 E-value=79 Score=24.93 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=25.5
Q ss_pred ccccCCeehHHHHHHHHHh--CCCcEEEEEecC
Q psy1482 40 LLPLVNKCLLEYTLEHLHL--SGIEEIIVFCTS 70 (627)
Q Consensus 40 Llpi~g~pli~~~l~~L~~--~gi~~i~vv~~~ 70 (627)
.+-++++|+..|++..+.. .|.++|+|-...
T Consensus 6 vv~vg~Kpv~~YV~~~i~~~n~g~~eV~ikA~G 38 (91)
T 3toe_A 6 VVYIGNKPVMNYVLAVVTQMNGGTSEVILKARG 38 (91)
T ss_dssp CEECCSSCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCCEEEEEEeh
Confidence 3568899999999999855 489999998764
No 203
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=21.93 E-value=1.2e+02 Score=32.67 Aligned_cols=94 Identities=13% Similarity=0.123 Sum_probs=58.6
Q ss_pred ccccCCee--hHHHHHHHHHhCCC-c---EEEEEecCC-----hHHHHHHHHhcccccCCeeEEEEeCCCCcchhhhhhc
Q psy1482 40 LLPLVNKC--LLEYTLEHLHLSGI-E---EIIVFCTSH-----VNQIRELVKRKEKSLVGTLITLIVSDGCYSFGDVMRD 108 (627)
Q Consensus 40 Llpi~g~p--li~~~l~~L~~~gi-~---~i~vv~~~~-----~~~i~~~l~~~~~~~~~~~v~~i~~~~~~~~gdalr~ 108 (627)
.+|.-|.+ .|..+|+.+..... . +|+||-... .+.++++... + ..|.++..+...|.+.|...
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~--~----~~v~vi~~~~n~G~~~A~N~ 190 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMAL--F----PSVRILRTKKREGLIRTRML 190 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTT--S----TTEEEEECSSCCCHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHh--C----CeEEEEECCCCCCHHHHHHH
Confidence 36666764 88899999876433 2 788876532 2334444433 1 24777877767788887663
Q ss_pred ccccCCccCC-EEEEeCCeeccc-cHHHHHHHHHH
Q psy1482 109 LDGKAVIRND-FILVSGDVVSNI-NLLSALKSFKK 141 (627)
Q Consensus 109 l~~~~~i~~d-fll~~gD~i~~~-~l~~~l~~h~~ 141 (627)
. ....+++ ++++.+|.+... -|..+++...+
T Consensus 191 G--~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 191 G--ASVATGDVITFLDSHCEANVNWLPPLLDRIAR 223 (570)
T ss_dssp H--HHHCCSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred H--HHhcCCCEEEEEcCCccccccHHHHHHHHHHh
Confidence 2 2223455 555688887765 46777776655
No 204
>3aai_A Copper homeostasis operon regulatory protein; all alpha proteins, 4-helix bundle, transcription; 2.10A {Thermus thermophilus}
Probab=20.43 E-value=1.3e+02 Score=23.84 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=32.0
Q ss_pred HHHHHHHhccC-ChhhHHHHHHhhHHhcCCChHHHHHHHHHHHHHhh
Q psy1482 474 DSLLRGYEEKL-VCDNLTLEINSSRYAYNVTVKEVNFYMVKAILVVK 519 (627)
Q Consensus 474 ~~l~~~~~~~~-~~~~~~lei~~lr~a~n~~~~~v~~~v~~ail~~~ 519 (627)
+.|.++++++. .|.+++..|...|-|-| .+...++..=+..+
T Consensus 28 ~gI~rMiEe~~~~C~dIl~QlaAvr~Al~----~~~~~il~~Hl~~C 70 (94)
T 3aai_A 28 EGILRMLEDEKVYCVDVLKQLKAVEGALD----RVGEMVLRAHLKDH 70 (94)
T ss_dssp HHHHHHHTSSEECHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 46788999999 99999999999999877 34444555555554
Done!