BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14832
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VRJ2|FITM_DROME FIT family protein CG10671 OS=Drosophila melanogaster GN=CG10671
PE=1 SV=1
Length = 423
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 146/221 (66%), Gaps = 13/221 (5%)
Query: 4 MAGRRNPIRRD----------SIKHQNFSSG--NFEQSKTKGTKPTPAKETLVDELIRVV 51
MA +R P+R + S + NF G + +S+ +GT+PT A ++ + L+ V
Sbjct: 1 MATKRRPLRPNLGGTAGSPSSSGSNMNFRPGGPDITRSEARGTRPTAAPTSIREILVMGV 60
Query: 52 LGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTL 111
+ L K + ++A YLG LF +S+IGD +P+PK+YF++S + NQYFVK+GWGWTL
Sbjct: 61 IHLCKKTIFFNTDLKVALYLGSLFVISVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTL 120
Query: 112 ICTIPFVVMTSYTYCCSDRKQ-VAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFS 170
+ +PF+V+++YT C D K+ + H R+ +ATFFW FWT +F +E+ YGRCT ++
Sbjct: 121 LFVVPFLVLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKGYA 180
Query: 171 RRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGW 211
+S CL+AG W GFDISGH+F+LI+S L++IEEA+PI W
Sbjct: 181 TKSSCLKAGHLWKGFDISGHAFILIHSSLVLIEEARPIIRW 221
>sp|Q52KL1|FITM2_DANRE Fat storage-inducing transmembrane protein 2 OS=Danio rerio
GN=fitm2 PE=2 SV=1
Length = 252
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 20/151 (13%)
Query: 73 ILFAVSIIGDVLP----YPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCS 128
+ F +S++G VL P+SYFS S + LN YFVK+ WGWT++ +PF+ +++
Sbjct: 29 LFFCISLVGSVLKNAELVPESYFSSSRNVLNLYFVKVSWGWTIVLLLPFIAYSNFYI--- 85
Query: 129 DRKQVAFHLLRLG---VATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLE 177
K F L RL VAT W T F YIE I G C E F ++ C +
Sbjct: 86 --KSHMFALRRLTSLLVATLVWYICTETFFYIEDITGSCYESNTMVVIRGEFDTKAACRK 143
Query: 178 AGARWSGFDISGHSFLLIYSVLIMIEEAKPI 208
AG W GFDISGHSF+L YS L+++EE P+
Sbjct: 144 AGFFWDGFDISGHSFILSYSSLVIMEEMVPM 174
>sp|Q6AX73|FITM2_XENLA Fat storage-inducing transmembrane protein 2 OS=Xenopus laevis
GN=fitm2 PE=2 SV=1
Length = 260
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 78 SIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHL 137
S++ ++ P P SY++ + LN YFVK WGWTL +PF+ +T+Y S K V L
Sbjct: 36 SLLKELSPLPDSYWNNKRNVLNVYFVKFCWGWTLWLLLPFITLTNYKLTGSITK-VLRRL 94
Query: 138 LRLGVATFFWMFWTNMFQYIESIYGRCTEP-------RFSRRSKCLEAGARWSGFDISGH 190
L V T FW TN+F YIE I G C E R +C G W GFDISGH
Sbjct: 95 SSLLVGTLFWYLCTNLFLYIEHITGSCYESEALLDSIEHQDRKECRLHGGFWHGFDISGH 154
Query: 191 SFLLIYSVLIMIEEAKPIQG 210
FLL Y +LI++EE I+
Sbjct: 155 CFLLSYCILIILEETSVIRS 174
>sp|A0JP80|FITM2_XENTR Fat storage-inducing transmembrane protein 2 OS=Xenopus tropicalis
GN=fitm2 PE=2 SV=1
Length = 260
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 73 ILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQ 132
I+ S++ ++ P P SY++ + LN YFVK WGWTL +PF+ +T+Y S K
Sbjct: 31 IVLGGSLLKELCPLPDSYWNNKRNVLNVYFVKFSWGWTLWLLLPFIALTNYKLTRSTTK- 89
Query: 133 VAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP-------RFSRRSKCLEAGARWSGF 185
V L L V+T W TN+F YIE+I G C E R +C W GF
Sbjct: 90 VLRRLSSLLVSTLIWYLCTNLFLYIENITGSCYESEAMSDPKEHQDRRECRLHSGYWHGF 149
Query: 186 DISGHSFLLIYSVLIMIEEAKPIQG 210
DISGH FLL Y +L+++EE I
Sbjct: 150 DISGHCFLLSYCILLILEETSIISN 174
>sp|Q5CZ37|FITM_CAEEL FIT family protein ZK265.9 OS=Caenorhabditis elegans GN=ZK265.9
PE=3 SV=1
Length = 283
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 4 MAGRRNPIRRDSIKHQNFSSGNFEQSKTKGTKPTPAKETLVDELIRVVLGLGNKYLMLEI 63
M+ RR+ R DS TK + + + + + + + + L ++
Sbjct: 1 MSTRRSSTRADST-----------------TKRPASPNSTPNAALGIFVAIARQILFIDA 43
Query: 64 KYRIATYLGILFAVSIIGDVLPYPKSYFSQSSH-FLNQYFVKLGWGWTLICTIPFVVMTS 122
+ YL + +S I + +Y+ H LNQY VK+GW WTL+ PF+ +S
Sbjct: 44 RKVALFYLAFVTVLSFIESRIELDSTYYLVQKHSVLNQYGVKMGWFWTLVIVGPFIWFSS 103
Query: 123 YTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARW 182
+ DR Q + RLGV T W F F + ++ C + R R++C E W
Sbjct: 104 KAHNRRDRDQPIVDVCRLGVGTACWYFSVQFFHKVLALTSMCDKGRTLTRAQCSEKEGVW 163
Query: 183 S-GFDISGHSFLLIYSVLIMIEEA 205
+ G+DISGH FL+IYS+LI+ EEA
Sbjct: 164 TPGYDISGHCFLMIYSILIITEEA 187
>sp|P59266|FITM2_MOUSE Fat storage-inducing transmembrane protein 2 OS=Mus musculus
GN=Fitm2 PE=1 SV=1
Length = 262
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 71 LGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDR 130
+ + A S++ ++ P P+SY S + LN YFVKL W WT+ +PF+ +T+Y +
Sbjct: 29 VAAMLAGSVVKELSPLPESYLSNKRNVLNVYFVKLAWAWTVCLLLPFIALTNY-HLTGKT 87
Query: 131 KQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP------RFSRRSK--CLEAGARW 182
V L L V T W T +F IE G C + R RSK C G W
Sbjct: 88 SLVLRRLSTLLVGTAIWYICTALFSNIEHYTGSCYQSPALEGIRQEHRSKQQCHREGGFW 147
Query: 183 SGFDISGHSFLLIYSVLIMIEE 204
GFDISGHSFLL + L+++EE
Sbjct: 148 HGFDISGHSFLLTFCALMIVEE 169
>sp|Q8N6M3|FITM2_HUMAN Fat storage-inducing transmembrane protein 2 OS=Homo sapiens
GN=FITM2 PE=2 SV=1
Length = 262
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 74 LFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQV 133
+ A S++ ++ P P+SY S + LN YFVK+ W WT +PF+ +T+Y + V
Sbjct: 32 MLAGSLLKELSPLPESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNY-HLTGKAGLV 90
Query: 134 AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLEAGARWSGF 185
L L V T W T++F IE G C + + +C + G W GF
Sbjct: 91 LRRLSTLLVGTAIWYICTSIFSNIEHYTGSCYQSPALEGVRKEHQSKQQCHQEGGFWHGF 150
Query: 186 DISGHSFLLIYSVLIMIEE 204
DISGHSFLL + L+++EE
Sbjct: 151 DISGHSFLLTFCALMIVEE 169
>sp|A4IFN5|FITM2_BOVIN Fat storage-inducing transmembrane protein 2 OS=Bos taurus GN=FITM2
PE=2 SV=1
Length = 262
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 74 LFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQV 133
+ A S++ ++ P P+SY S + LN YFVK+ W WT +PF+ +T+Y + V
Sbjct: 32 MLAGSLLKELSPLPESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNY-HLTGKAGLV 90
Query: 134 AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLEAGARWSGF 185
L L V T W T +F IE G C + + +C G W GF
Sbjct: 91 LRRLSTLLVGTAIWYVCTAIFSNIEHYTGSCYQSPALEGERKEHQSKQQCHGEGGFWHGF 150
Query: 186 DISGHSFLLIYSVLIMIEE 204
DISGHSFLL + L+++EE
Sbjct: 151 DISGHSFLLTFCALMIVEE 169
>sp|B2LYG4|FITM2_PIG Fat storage-inducing transmembrane protein 2 OS=Sus scrofa GN=FITM2
PE=2 SV=1
Length = 262
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 74 LFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQV 133
+ A S++ ++ P P+SY S + LN YFVK+ W WT +PF+ +T+Y + V
Sbjct: 32 MLAGSLLKELSPLPESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNY-HLTGKAGLV 90
Query: 134 AFHLLRLGVATFFWMFWTNMFQYIESIYGRC----------TEPRFSRRSKCLEAGARWS 183
L L V T W T +F +E G C EP + +C G W
Sbjct: 91 LRRLSTLLVGTAIWYVCTAIFSNVEHYTGSCYQSPALEGVRNEPL--SKQQCHGQGGFWH 148
Query: 184 GFDISGHSFLLIYSVLIMIEE 204
GFDISGHSFLL + L+++EE
Sbjct: 149 GFDISGHSFLLTFCALMIVEE 169
>sp|A7YWN2|FITM1_BOVIN Fat storage-inducing transmembrane protein 1 OS=Bos taurus GN=FITM1
PE=2 SV=1
Length = 292
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 70 YLGILFAVSIIGDVLPY---PKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYC 126
Y L AV I G +L + P++ F+ +F N FV WGWT FV++ +
Sbjct: 56 YHAWLAAVVIFGPLLQFHVNPRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLV--VFL 113
Query: 127 CSDRKQV-AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLE 177
+ R V A HL RL V W F IE + G C EP R CL
Sbjct: 114 ATRRVAVTARHLSRLVVGAAVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRRSCLA 173
Query: 178 AGARWSGFDISGHSFLLIYSVLIMIEEAK 206
AG +W G+ +S H+FLL + L+M EEA
Sbjct: 174 AGHQWRGYTVSSHTFLLTFCCLLMAEEAA 202
>sp|A5D6W6|FITM1_HUMAN Fat storage-inducing transmembrane protein 1 OS=Homo sapiens
GN=FITM1 PE=1 SV=1
Length = 292
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 70 YLGILFAVSIIGDVLPY---PKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYC 126
Y L AV I G +L + P++ F+ +F N FV WGWT FV++ +
Sbjct: 56 YHAWLAAVVIFGPLLQFHVNPRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLV--VFL 113
Query: 127 CSDRKQV-AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLE 177
+ R V A HL RL V W F IE + G C EP R CL
Sbjct: 114 ATRRVAVTARHLSRLVVGAAVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRRSCLA 173
Query: 178 AGARWSGFDISGHSFLLIYSVLIMIEEAK 206
AG +W G+ +S H+FLL + L+M EEA
Sbjct: 174 AGHQWRGYTVSSHTFLLTFCCLLMAEEAA 202
>sp|Q91V79|FITM1_MOUSE Fat storage-inducing transmembrane protein 1 OS=Mus musculus
GN=Fitm1 PE=1 SV=1
Length = 292
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 70 YLGILFAVSIIGDVLPY---PKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYC 126
Y L AV I G +L + ++ F+ +F N FV WGWT FV++ +
Sbjct: 56 YHAWLAAVVIFGPLLQFHVNSRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLV--VFL 113
Query: 127 CSDRKQV-AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLE 177
+ R V A HL RL V W F IE + G C EP R CL
Sbjct: 114 ATRRVAVTARHLSRLVVGAAVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRKSCLA 173
Query: 178 AGARWSGFDISGHSFLLIYSVLIMIEEAK 206
AG +W G+ +S H+FLL + L+M EEA
Sbjct: 174 AGHQWRGYTVSSHTFLLTFCCLLMAEEAA 202
>sp|B2MVP8|FITM1_PIG Fat storage-inducing transmembrane protein 1 OS=Sus scrofa GN=FITM1
PE=2 SV=1
Length = 290
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 70 YLGILFAVSIIGDVLPY---PKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYC 126
Y L AV I G +L + P++ F+ +F N FV WGWT FV++ +
Sbjct: 56 YHAWLAAVVIFGPLLQFHVNPRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLV--VFL 113
Query: 127 CSDRKQV-AFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEP--------RFSRRSKCLE 177
+ R V A HL RL V W F IE + G C EP R L
Sbjct: 114 ATRRVAVTARHLSRLVVGAAVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRRSRLA 173
Query: 178 AGARWSGFDISGHSFLLIYSVLIMIEEAK 206
AG +W G+ +S H+FLL + L+M EEA
Sbjct: 174 AGHQWRGYTVSSHTFLLTFCCLLMAEEAA 202
>sp|Q5CZN0|FITM1_DANRE Fat storage-inducing transmembrane protein 1 OS=Danio rerio
GN=fitm1 PE=2 SV=1
Length = 290
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 29/125 (23%)
Query: 89 SYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAF---HLLRLGVATF 145
S F++ +HFL + F++ GWGWT I FV + S+ S R+ + HL RL VA
Sbjct: 49 SVFAKRTHFLYRVFLRSGWGWTCIFVGSFVFVLSF----SVRRSLTLSLRHLSRLAVAGG 104
Query: 146 FWMFWTNMFQYIESIYGRCTEP----------------------RFSRRSKCLEAGARWS 183
W+ + + +E+ G C EP + C+ +G W
Sbjct: 105 LWLGFRKLLCLLENATGSCYEPLSAALEMTSGTNGEGQPLLLLREAETKETCVRSGMLWR 164
Query: 184 GFDIS 188
G+++S
Sbjct: 165 GYEVS 169
>sp|Q9HGM4|SCS3_SCHPO FIT family protein scs3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=scs3 PE=3 SV=1
Length = 250
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 30/172 (17%)
Query: 51 VLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWT 110
+L L K ++L Y LG ++++ + + SYF S + +N FVK GW WT
Sbjct: 16 ILKLRRKDILLFEIYATTLLLGSIYSIYVDKWSIT---SYFGNSKNLINLIFVKRGWFWT 72
Query: 111 LICTIPFVVMTSYTYCCSD--RKQVAFHLL-RLGVATFFWMFWTNMF---QYIESIY--- 161
+ Y Y D R ++ F + R VAT +WMF T F I+ +
Sbjct: 73 SLV---------YFYHAWDQKRNKIDFKFISRYIVATLWWMFVTQWFIGPGLIDRTFALS 123
Query: 162 -GRCTEPRFSRR-------SKCLEAGARWS-GFDISGHSFLLIYSVLIMIEE 204
G C S C WS G D+SGH FLL +S L M+ E
Sbjct: 124 GGSCKNFDGDSSVFIPLTASTCKGLNGSWSGGHDLSGHVFLLTHSSLFMLSE 175
>sp|P49899|IOD3_XENLA Type III iodothyronine deiodinase OS=Xenopus laevis GN=dio3 PE=1
SV=2
Length = 271
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 161 YGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWL 212
+G CT P F R L+A R + + FLL+Y IEEA P GWL
Sbjct: 127 FGSCTUPPFMAR---LQAYRRLAAQHVGIADFLLVY-----IEEAHPSDGWL 170
>sp|P49898|IOD3_LITCT Type III iodothyronine deiodinase OS=Lithobates catesbeiana GN=dio3
PE=2 SV=2
Length = 269
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 161 YGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWL 212
+G CT P F R L+A R + + FLL+Y IEEA P GWL
Sbjct: 128 FGSCTUPPFMAR---LQAYQRLAAQRLDFADFLLVY-----IEEAHPCDGWL 171
>sp|Q12116|TMS1_YEAST Membrane protein TMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TMS1 PE=1 SV=1
Length = 473
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 8 RNPIRRDSIKHQNFSSGNFEQSKTKGT------KPTPAKETLVDELIRVVLGLGNKYLML 61
RN +R ++IK Q G+ +S T PT A + D+ G Y +
Sbjct: 347 RNQLRYEAIK-QAVEEGSLPESALYDTAWLGTSSPTGAMDNQNDDERT---GTKYNYTLF 402
Query: 62 EIKYRIAT-YLGILFAVSI----IGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLI 112
+ + +AT ++ IL +++ +GD +P ++YF ++ + +GWT++
Sbjct: 403 HVIFFLATQWIAILLTINVTQDDVGDFIPVGRTYFYSWVKIVSAWICYALYGWTVV 458
>sp|Q12042|YP162_YEAST Vacuolar membrane protein YPL162C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL162C PE=1 SV=1
Length = 273
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 SIKHQNFSSGNFEQSKTKGTKP-TPAKETLVDELIRVVLGLG 55
S+ QN SGN+ SKT G+ P P V +L+ ++GLG
Sbjct: 124 SLHFQNIESGNYFPSKTVGSHPRKPLFSAFVKQLLIFIVGLG 165
>sp|Q06676|YFT2_YEAST FIT family protein YFT2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YFT2 PE=1 SV=1
Length = 274
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 154 FQYIESIY----GRCTE-PRFSRRSKCLEAGARWSG-FDISGH-SFLLIYSVLIMIE 203
FQ+I+ ++ G C+ + + KC +W G FDISGH FL+ S+++ +E
Sbjct: 136 FQFIDHVFIWTGGECSSGSKTTSAEKCRLENGKWDGGFDISGHFCFLVSISMILWME 192
>sp|P34577|YNX4_CAEEL Uncharacterized protein T20G5.4 OS=Caenorhabditis elegans
GN=T20G5.4 PE=3 SV=2
Length = 456
Score = 30.4 bits (67), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 74 LFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLI 112
L V+ G ++P+ K+ F + N+YF+ W W L+
Sbjct: 154 LDTVAAAGFMMPHEKANFDLIQYNYNKYFLPFNWAWALV 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,275,318
Number of Sequences: 539616
Number of extensions: 3010988
Number of successful extensions: 7844
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7808
Number of HSP's gapped (non-prelim): 25
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)