BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14833
(63 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94887|NRX4_DROME Neurexin-4 OS=Drosophila melanogaster GN=Nrx-IV PE=1 SV=2
Length = 1284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
+F PF+WW+SR+N MDYW G++ G+RKCECGILG C DPTKWCNCD+
Sbjct: 695 NFRPFSWWISRHNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCDS 742
>sp|Q96NU0|CNT3B_HUMAN Contactin-associated protein-like 3B OS=Homo sapiens GN=CNTNAP3B
PE=2 SV=2
Length = 1288
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 10 PVENDFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDAGQ 63
P D P +WWV R N WGGS+ +KC CG+ G CID +CNCDAGQ
Sbjct: 690 PDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGQ 743
>sp|Q9BZ76|CNTP3_HUMAN Contactin-associated protein-like 3 OS=Homo sapiens GN=CNTNAP3 PE=2
SV=3
Length = 1288
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 10 PVENDFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDAGQ 63
P D P +WWV R N WGGS+ +KC CG+ G CID +CNCDAG+
Sbjct: 690 PDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGR 743
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 CSESYPV-ENDFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
C +S V + D P +WWV R N YWGGS +KC CG+ G CID +CNCDA
Sbjct: 684 CKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDA 741
>sp|Q99P47|CNTP4_MOUSE Contactin-associated protein-like 4 OS=Mus musculus GN=Cntnap4 PE=2
SV=2
Length = 1310
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 CSESYPV-ENDFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
C +S V + D P +WWV R N YWGGS+ +KC CG+ G CID CNCDA
Sbjct: 686 CKKSRLVNQQDGSPRSWWVGRTNETQTYWGGSLPVHQKCTCGLEGNCIDAQYHCNCDA 743
>sp|Q0V8T4|CTP5C_RAT Contactin-associated protein like 5-3 OS=Rattus norvegicus
GN=Cntnap5c PE=2 SV=1
Length = 1307
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D PF WW+ R+N K YWGGSV G +KC CG+ +C+D +CNCDA
Sbjct: 694 DGAPFTWWIGRSNEKHHYWGGSVPGIQKCGCGLEQSCLDIGHFCNCDA 741
>sp|Q0V8S9|CNTP5_CHICK Contactin-associated protein-like 5 OS=Gallus gallus GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 17 PFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
PFAWWV R N K YWGGS+ G ++C CG+ +C+D +CNCDA
Sbjct: 695 PFAWWVGRANEKHLYWGGSLPGIQQCACGLEESCLDMRYFCNCDA 739
>sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Homo sapiens GN=CNTNAP5 PE=2
SV=1
Length = 1306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D PF WW+ R+N + YWGGS G ++CECG+ +C+D +CNCDA
Sbjct: 692 DGTPFTWWIGRSNERHPYWGGSPPGVQQCECGLDESCLDIQHFCNCDA 739
>sp|Q0V8T0|CNTP5_CANFA Contactin-associated protein-like 5 OS=Canis familiaris GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D PF WW+ R+N K YWGG+ G ++CECG+ +C+D +CNCDA
Sbjct: 692 DGTPFTWWIGRSNEKHPYWGGAPPGVQQCECGLDESCLDVRHFCNCDA 739
>sp|Q0V8T7|CTP5C_MOUSE Contactin-associated protein like 5-3 OS=Mus musculus GN=Cntnap5c
PE=2 SV=1
Length = 1305
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 17 PFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
PF WW+ R+N K YWGGS+ G ++C CG+ +C+D +CNCDA
Sbjct: 695 PFTWWIGRSNEKHPYWGGSLPGVQQCGCGLEESCLDIRHFCNCDA 739
>sp|Q9CPW0|CNTP2_MOUSE Contactin-associated protein-like 2 OS=Mus musculus GN=Cntnap2 PE=1
SV=2
Length = 1332
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D P+ WWV + N K YWGGS G +KC CGI C DP +CNCDA
Sbjct: 700 DGSPYTWWVGKANEKHYYWGGSEPGIQKCACGIERNCTDPKYYCNCDA 747
>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1
SV=1
Length = 1331
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D P+ WWV + N K YWGGS G +KC CGI C DP +CNCDA
Sbjct: 700 DGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDA 747
>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo abelii GN=CNTNAP2 PE=2
SV=1
Length = 1331
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D P+ WWV + N K YWGGS G +KC CGI C DP +CNCDA
Sbjct: 700 DGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDA 747
>sp|P78357|CNTP1_HUMAN Contactin-associated protein 1 OS=Homo sapiens GN=CNTNAP1 PE=1 SV=1
Length = 1384
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 16 HPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDAGQ 63
+P+++W+ RN + YWGGS G ++C CG+ +C+DP +CNCDA Q
Sbjct: 689 YPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQ 736
>sp|P97846|CNTP1_RAT Contactin-associated protein 1 OS=Rattus norvegicus GN=Cntnap1 PE=1
SV=1
Length = 1381
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 16 HPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDAGQ 63
+P+++W+ RN + YWGGS G ++C CG+ +CIDP CNCDA Q
Sbjct: 690 YPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDQSCIDPALHCNCDADQ 737
>sp|Q0V8T9|CTP5A_MOUSE Contactin-associated protein like 5-1 OS=Mus musculus GN=Cntnap5a
PE=2 SV=1
Length = 1304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D PF WW+ R+ + YWGG+V G ++C CG+ +C+D +CNCDA
Sbjct: 692 DGAPFTWWIGRSTERHPYWGGAVPGVQQCGCGLEESCLDSRHFCNCDA 739
>sp|O54991|CNTP1_MOUSE Contactin-associated protein 1 OS=Mus musculus GN=Cntnap1 PE=1 SV=2
Length = 1385
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 16 HPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDAGQ 63
+P+++W+ RN + YWGGS G ++C CG+ +C+DP CNCDA Q
Sbjct: 690 YPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDQSCVDPALHCNCDADQ 737
>sp|Q0V8T6|CTP5A_RAT Contactin-associated protein like 5-1 OS=Rattus norvegicus
GN=Cntnap5a PE=2 SV=1
Length = 1305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
D PF WW+ R+N + YW GSV G ++C CG+ +C+D +CNCDA
Sbjct: 692 DGTPFTWWIGRSNERHPYWEGSVPGVQQCGCGLEESCLDNAYFCNCDA 739
>sp|Q0V8T3|CTP5D_RAT Contactin-associated protein like 5-4 OS=Rattus norvegicus
GN=Cntnap5d PE=2 SV=1
Length = 1305
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 5 CSESYPVEN-DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCIDPTKWCNCDA 61
C S+ ++ D PF WW+ R+N + +YW GSV ++C C C+D +CNCDA
Sbjct: 682 CRRSHLLKTPDGAPFTWWIGRSNKRHNYWEGSVPRVQQCRCVHKENCLDIRSFCNCDA 739
>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus
GN=Cntnap5b PE=2 SV=1
Length = 1292
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTC 50
D PF WW+ R+N + YWGG V G ++C CG+ +C
Sbjct: 692 DEAPFTWWIGRSNERHPYWGGYVPGVQQCGCGLEESC 728
>sp|Q0V8T8|CTP5B_MOUSE Contactin-associated protein like 5-2 OS=Mus musculus GN=Cntnap5b
PE=2 SV=1
Length = 1292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 14 DFHPFAWWVSRNNHKMDYWGGSVFGTRKCECGILGTCID 52
D PFAWW R+N + YWGG G +KC CG+ +C++
Sbjct: 692 DGAPFAWWTGRSNERHPYWGGYFPGDQKCGCGLEESCLE 730
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.538
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,443,737
Number of Sequences: 539616
Number of extensions: 865107
Number of successful extensions: 1328
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1301
Number of HSP's gapped (non-prelim): 33
length of query: 63
length of database: 191,569,459
effective HSP length: 35
effective length of query: 28
effective length of database: 172,682,899
effective search space: 4835121172
effective search space used: 4835121172
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)