Query psy14833
Match_columns 63
No_of_seqs 101 out of 201
Neff 5.3
Searched_HMMs 13730
Date Fri Aug 16 21:59:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14833.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14833hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h03p2 g.18.1.1 (P:67-129) Co 28.4 12 0.00089 18.1 1.4 33 1-37 27-59 (63)
2 d1g40a2 g.18.1.1 (A:65-126) Co 28.2 13 0.00098 18.0 1.5 34 1-37 25-58 (62)
3 d2o39c2 g.18.1.1 (C:63-126) CD 28.1 23 0.0016 17.1 2.4 34 1-38 27-60 (64)
4 d1ok3a1 g.18.1.1 (A:1-64) Comp 23.3 26 0.0019 16.8 2.1 11 1-11 29-39 (64)
5 d1ppqa_ g.18.1.1 (A:) Compleme 21.5 40 0.0029 16.4 2.7 33 1-37 30-62 (68)
6 d2o39c1 g.18.1.1 (C:1-62) CD46 21.2 13 0.00097 18.1 0.6 21 1-21 26-46 (62)
7 d1h03p1 g.18.1.1 (P:5-66) Comp 20.6 24 0.0018 17.0 1.6 33 1-37 26-58 (62)
8 d1autl1 g.3.11.1 (L:49-96) Act 19.9 34 0.0025 16.3 2.1 18 43-61 15-34 (48)
9 d1ok3a2 g.18.1.1 (A:65-128) Co 19.5 37 0.0027 16.2 2.2 10 1-10 29-38 (64)
10 d1cr8a_ g.12.1.1 (A:) Ligand-b 17.8 15 0.0011 17.2 0.3 15 44-58 11-25 (42)
No 1
>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.38 E-value=12 Score=18.13 Aligned_cols=33 Identities=12% Similarity=0.384 Sum_probs=20.4
Q ss_pred CceecccccCCCCCCCceEeeecCCCCeEEecCCCCC
Q psy14833 1 MRDTCSESYPVENDFHPFAWWVSRNNHKMDYWGGSVF 37 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW~~r~g~~~~yWgGa~~ 37 (63)
|+|+|...|.+.+. ...-.+..... -.|.+.+|
T Consensus 27 v~y~C~~Gy~l~G~--~~~~C~~~~~~--g~Ws~~~P 59 (63)
T d1h03p2 27 VTYACNKGFTMIGE--HSIYCTVNNDE--GEWSGPPP 59 (63)
T ss_dssp EEEEECTTCEEESC--SEEEEEEETTE--EEESSCCC
T ss_pred EEEECCCCCEEcCC--CcEEEeccCCC--CEEcCCCC
Confidence 57899998887654 66666532211 24876655
No 2
>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]}
Probab=28.22 E-value=13 Score=17.99 Aligned_cols=34 Identities=9% Similarity=0.224 Sum_probs=21.1
Q ss_pred CceecccccCCCCCCCceEeeecCCCCeEEecCCCCC
Q psy14833 1 MRDTCSESYPVENDFHPFAWWVSRNNHKMDYWGGSVF 37 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW~~r~g~~~~yWgGa~~ 37 (63)
|+|.|...|.+.+. +....+... .....|.+.+|
T Consensus 25 v~y~C~~Gy~l~G~--~~~~C~~~~-~~~~~Ws~~~P 58 (62)
T d1g40a2 25 ITYSCNSGYHLIGE--SKSYCELGS-TGSMVWNPEAP 58 (62)
T ss_dssp ECEECCTTCEECSC--SSEEBCCSS-SSCCCBSTTSS
T ss_pred EEEECCCCCEEcCC--CceEEeCCC-CCCCEECCCCc
Confidence 47888888877644 666665332 23345777665
No 3
>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.07 E-value=23 Score=17.12 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=22.5
Q ss_pred CceecccccCCCCCCCceEeeecCCCCeEEecCCCCCC
Q psy14833 1 MRDTCSESYPVENDFHPFAWWVSRNNHKMDYWGGSVFG 38 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW~~r~g~~~~yWgGa~~~ 38 (63)
+.|.|...|.+.+. +...... +|.. ..|.+.+|.
T Consensus 27 ~~f~C~~Gy~l~G~--~~~~C~~-~g~~-~~Ws~~~P~ 60 (64)
T d2o39c2 27 MHFICNEGYYLIGE--EILYCEL-KGSV-AIWSGKPPI 60 (64)
T ss_dssp EEEEECTTCEECSC--SEEEEEE-CSSC-EEESSCCCC
T ss_pred EEEECCCCCEEcCC--CceEEeC-CCCC-CeECCCCCE
Confidence 46889988887654 7777754 4443 468877653
No 4
>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.26 E-value=26 Score=16.85 Aligned_cols=11 Identities=27% Similarity=0.567 Sum_probs=6.3
Q ss_pred CceecccccCC
Q psy14833 1 MRDTCSESYPV 11 (63)
Q Consensus 1 iry~C~~s~~~ 11 (63)
|+|+|...|.+
T Consensus 29 v~Y~C~~Gy~~ 39 (64)
T d1ok3a1 29 ITYKCEESFVK 39 (64)
T ss_dssp EEEEECTTCEE
T ss_pred EEEEeCCCcEE
Confidence 35666666554
No 5
>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.49 E-value=40 Score=16.41 Aligned_cols=33 Identities=9% Similarity=0.149 Sum_probs=20.2
Q ss_pred CceecccccCCCCCCCceEeeecCCCCeEEecCCCCC
Q psy14833 1 MRDTCSESYPVENDFHPFAWWVSRNNHKMDYWGGSVF 37 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW~~r~g~~~~yWgGa~~ 37 (63)
++|+|...|.+.+. ...-... +|+.. -|.+.+|
T Consensus 30 ~~y~C~~Gy~l~G~--~~~~C~~-~g~~~-~Ws~~~P 62 (68)
T d1ppqa_ 30 ITYSCTTGHRLIGH--SSAECIL-SGNTA-HWSTKPP 62 (68)
T ss_dssp CEEEESTTCCBSSC--SCCCEEE-CSSSE-EESSCCC
T ss_pred EEEEeCCCcEEcCC--CcEEEeC-CCCCC-EECCCCC
Confidence 57889888887654 5555543 34332 5876655
No 6
>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.19 E-value=13 Score=18.06 Aligned_cols=21 Identities=10% Similarity=0.151 Sum_probs=13.4
Q ss_pred CceecccccCCCCCCCceEee
Q psy14833 1 MRDTCSESYPVENDFHPFAWW 21 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW 21 (63)
|+|+|...|.+.+.+....-.
T Consensus 26 v~Y~C~~Gy~l~~~~~~~i~C 46 (62)
T d2o39c1 26 VDYKCKKGYFYIPPLATHTIC 46 (62)
T ss_dssp EEEEECTTEEECSSSCSEEEC
T ss_pred EEEEeCCCcEECCCCCCEEEE
Confidence 579999988765443444444
No 7
>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.65 E-value=24 Score=16.96 Aligned_cols=33 Identities=9% Similarity=0.291 Sum_probs=21.6
Q ss_pred CceecccccCCCCCCCceEeeecCCCCeEEecCCCCC
Q psy14833 1 MRDTCSESYPVENDFHPFAWWVSRNNHKMDYWGGSVF 37 (63)
Q Consensus 1 iry~C~~s~~~~~~~~~~~wW~~r~g~~~~yWgGa~~ 37 (63)
|.|.|...|.+.+. ...-... +|+. ..|.+.+|
T Consensus 26 v~f~C~~Gy~L~G~--~~~~C~~-~g~~-~~Ws~~~P 58 (62)
T d1h03p1 26 ISFSCNTGYKLFGS--TSSFCLI-SGSS-VQWSDPLP 58 (62)
T ss_dssp EEEEECTTEEEESC--SEEEEEE-ETTE-EEESSCCC
T ss_pred EEEECCCCCEEcCC--CcEEEeC-CCCc-CeECCCCC
Confidence 46889888887654 6666654 4553 36877655
No 8
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.91 E-value=34 Score=16.29 Aligned_cols=18 Identities=50% Similarity=1.143 Sum_probs=11.8
Q ss_pred cCCCCCCccC--CCCceecCC
Q psy14833 43 ECGILGTCID--PTKWCNCDA 61 (63)
Q Consensus 43 ~CG~~~~C~~--~~~~CNCDa 61 (63)
.|. .|+|++ ..+.|.|..
T Consensus 15 PC~-nG~C~~~~~~y~C~C~~ 34 (48)
T d1autl1 15 CCG-HGTCIDGIGSFSCDCRS 34 (48)
T ss_dssp TTT-SEEECCCSSCCCEEECT
T ss_pred CCC-CCEEECCCCCCeEeCCC
Confidence 454 378874 567888865
No 9
>d1ok3a2 g.18.1.1 (A:65-128) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.50 E-value=37 Score=16.21 Aligned_cols=10 Identities=20% Similarity=0.574 Sum_probs=5.6
Q ss_pred CceecccccC
Q psy14833 1 MRDTCSESYP 10 (63)
Q Consensus 1 iry~C~~s~~ 10 (63)
|+|+|...|.
T Consensus 29 v~Y~C~~Gy~ 38 (64)
T d1ok3a2 29 VEYECRPGYR 38 (64)
T ss_dssp EEEEECTTEE
T ss_pred EEEEeCCCcE
Confidence 3566666654
No 10
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density lipoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.79 E-value=15 Score=17.15 Aligned_cols=15 Identities=33% Similarity=0.789 Sum_probs=10.8
Q ss_pred CCCCCCccCCCCcee
Q psy14833 44 CGILGTCIDPTKWCN 58 (63)
Q Consensus 44 CG~~~~C~~~~~~CN 58 (63)
|..++.|+.....|+
T Consensus 11 C~~~~~CI~~~~~CD 25 (42)
T d1cr8a_ 11 CRLDGLCIPLRWRCD 25 (42)
T ss_dssp CTTTCCEECGGGSSS
T ss_pred cCCCCEEccchhcCC
Confidence 444678888887776
Done!