Query psy14840
Match_columns 119
No_of_seqs 171 out of 1718
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 22:08:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.5 4.4E-14 1.5E-18 108.3 7.0 65 54-118 28-95 (510)
2 2lnl_A C-X-C chemokine recepto 99.4 9.6E-13 3.3E-17 93.7 7.7 59 57-116 10-68 (296)
3 3odu_A C-X-C chemokine recepto 99.4 8.1E-13 2.8E-17 99.7 7.3 62 55-117 45-106 (502)
4 2ks9_A Substance-P receptor; w 99.4 5.1E-12 1.8E-16 91.9 10.8 60 58-117 32-91 (364)
5 3v2y_A Sphingosine 1-phosphate 99.3 8.1E-12 2.8E-16 95.9 8.2 59 59-117 64-122 (520)
6 1u19_A Rhodopsin; G protein-co 99.3 2.4E-11 8.1E-16 87.6 10.2 62 55-116 35-96 (349)
7 2rh1_A Beta-2-adrenergic recep 99.3 5.9E-12 2E-16 96.0 7.2 63 55-117 37-99 (500)
8 3eml_A Human adenosine A2A rec 99.3 8.1E-12 2.8E-16 93.7 6.4 61 58-118 21-81 (488)
9 3vw7_A Proteinase-activated re 99.2 1.2E-11 4.1E-16 92.9 5.1 63 53-116 15-77 (484)
10 4eiy_A Adenosine receptor A2A/ 99.2 2.9E-11 1E-15 89.8 7.2 62 56-117 29-90 (447)
11 3uon_A Human M2 muscarinic ace 99.2 1.9E-11 6.4E-16 91.3 6.2 60 58-117 23-82 (467)
12 4ea3_A Fusion protein of nocic 99.2 2.7E-11 9.3E-16 90.7 6.8 67 50-117 117-183 (434)
13 3pbl_A D(3) dopamine receptor, 99.2 1.5E-11 5.2E-16 92.3 4.8 60 58-117 38-97 (481)
14 4dkl_A MU-type opioid receptor 99.2 4.4E-11 1.5E-15 89.2 7.1 61 56-117 15-75 (464)
15 3rze_A Histamine H1 receptor, 99.1 2.4E-11 8.3E-16 90.4 3.6 60 58-117 8-67 (452)
16 4amj_A Beta-1 adrenergic recep 99.1 5.5E-11 1.9E-15 84.2 5.3 62 56-117 9-70 (315)
17 3sn6_R Lysozyme, beta-2 adrene 99.1 9.9E-11 3.4E-15 89.4 6.1 63 55-117 179-241 (514)
18 2z73_A Rhodopsin; visual pigme 99.0 6.5E-10 2.2E-14 83.2 7.9 61 57-117 33-94 (448)
19 2lot_A Apelin receptor; membra 97.6 7.8E-06 2.7E-10 46.3 -0.4 30 60-89 30-59 (64)
20 3arc_I Photosystem II reaction 29.9 51 0.0017 16.0 2.4 18 59-76 9-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.49 E-value=4.4e-14 Score=108.31 Aligned_cols=65 Identities=15% Similarity=0.377 Sum_probs=54.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CchHHHHHHHHHHHHHHHHhhhhcccccc
Q psy14840 54 VPLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKM---KTVTNFFIINLSTNDIILTLFCVPFSRLL 118 (119)
Q Consensus 54 ~~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l---~~~~~~fl~nLa~~Dll~~~~~~P~~~~~ 118 (119)
+...+.++.++|.+++++|++||+++++++.++|++ |+++|+|++|||++|++++++++|+.+++
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~ 95 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYN 95 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334577888999999999999999999999887754 48899999999999999999999987653
No 2
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.39 E-value=9.6e-13 Score=93.68 Aligned_cols=59 Identities=36% Similarity=0.681 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhcccc
Q psy14840 57 FRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSR 116 (119)
Q Consensus 57 ~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~ 116 (119)
.+.+..++|.+++++|++||+++++++.++|++|+++|+|+.|||++|+++++ .+|..+
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~ 68 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWA 68 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHH
Confidence 36788889999999999999999999999999999999999999999999987 567654
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.38 E-value=8.1e-13 Score=99.73 Aligned_cols=62 Identities=26% Similarity=0.566 Sum_probs=55.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 55 PLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 55 ~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
...+.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++ ++|+.+.
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~-~~p~~~~ 106 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI-TLPFWAV 106 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHT-THHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3447888899999999999999999999999999999999999999999999964 8887654
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.37 E-value=5.1e-12 Score=91.90 Aligned_cols=60 Identities=30% Similarity=0.484 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 58 RYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 58 ~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
..+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++..+|..+.
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~ 91 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFT 91 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345578899999999999999999999999999999999999999999998878887543
No 5
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.29 E-value=8.1e-12 Score=95.87 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 59 YSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 59 ~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~ 122 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLL 122 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999988887553
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.29 E-value=2.4e-11 Score=87.55 Aligned_cols=62 Identities=16% Similarity=0.291 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhcccc
Q psy14840 55 PLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSR 116 (119)
Q Consensus 55 ~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~ 116 (119)
+....+..+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++..+|..+
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~ 96 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL 96 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHH
Confidence 34456778889999999999999999999999999999999999999999999998888654
No 7
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.28 E-value=5.9e-12 Score=96.01 Aligned_cols=63 Identities=30% Similarity=0.488 Sum_probs=56.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 55 PLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 55 ~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
.....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~ 99 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAA 99 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344677788999999999999999999999999999999999999999999999988997654
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.25 E-value=8.1e-12 Score=93.67 Aligned_cols=61 Identities=33% Similarity=0.663 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhcccccc
Q psy14840 58 RYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRLL 118 (119)
Q Consensus 58 ~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~~ 118 (119)
..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.+
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~ 81 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI 81 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888999999999999999999999999999999999999999999998899986643
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.20 E-value=1.2e-11 Score=92.94 Aligned_cols=63 Identities=24% Similarity=0.394 Sum_probs=55.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhcccc
Q psy14840 53 AVPLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSR 116 (119)
Q Consensus 53 ~~~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~ 116 (119)
..+....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++ ++|..+
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~ 77 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKI 77 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 345567788999999999999999999999999999999999999999999999977 466543
No 10
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.20 E-value=2.9e-11 Score=89.84 Aligned_cols=62 Identities=32% Similarity=0.624 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 56 LFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 56 ~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|+.+.
T Consensus 29 ~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~ 90 (447)
T 4eiy_A 29 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT 90 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888999999999999999999999999999999999999999999998889997654
No 11
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.20 E-value=1.9e-11 Score=91.35 Aligned_cols=60 Identities=23% Similarity=0.490 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 58 RYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 58 ~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~ 82 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTL 82 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888999999999999999999999999999999999999999999999888887654
No 12
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.20 E-value=2.7e-11 Score=90.69 Aligned_cols=67 Identities=34% Similarity=0.586 Sum_probs=56.3
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 50 GVMAVPLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
+....+..+.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+ +++|+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~-~~~p~~~~ 183 (434)
T 4ea3_A 117 GAFLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVL-LTLPFQGT 183 (434)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHH-HHhHHHHH
Confidence 34445566788889999999999999999999999999999999999999999999984 47887654
No 13
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=92.30 Aligned_cols=60 Identities=27% Similarity=0.584 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 58 RYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 58 ~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
+.+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~ 97 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVY 97 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677889999999999999999999999999999999999999999998889997653
No 14
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.18 E-value=4.4e-11 Score=89.16 Aligned_cols=61 Identities=36% Similarity=0.633 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 56 LFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 56 ~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++ +|+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~ 75 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSV 75 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 3467888999999999999999999999999999999999999999999999885 887654
No 15
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.13 E-value=2.4e-11 Score=90.40 Aligned_cols=60 Identities=32% Similarity=0.464 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 58 RYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 58 ~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
..++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~ 67 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNIL 67 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677889999999999999999999999999999999999999999998889998764
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.13 E-value=5.5e-11 Score=84.24 Aligned_cols=62 Identities=27% Similarity=0.507 Sum_probs=55.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 56 LFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 56 ~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
..+....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++..+|..+.
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~ 70 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGAT 70 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34677888999999999999999999999999999999999999999999998878887543
No 17
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.10 E-value=9.9e-11 Score=89.43 Aligned_cols=63 Identities=30% Similarity=0.488 Sum_probs=56.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhhccccc
Q psy14840 55 PLFRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLFCVPFSRL 117 (119)
Q Consensus 55 ~~~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~~~P~~~~ 117 (119)
+.......+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~ 241 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAA 241 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 334677888999999999999999999999999999999999999999999999888887654
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.03 E-value=6.5e-10 Score=83.20 Aligned_cols=61 Identities=30% Similarity=0.501 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhh-hhccccc
Q psy14840 57 FRYSVISFYSVIFVMSLLGNGLVCYAVLVSQKMKTVTNFFIINLSTNDIILTLF-CVPFSRL 117 (119)
Q Consensus 57 ~~~~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l~~~~~~fl~nLa~~Dll~~~~-~~P~~~~ 117 (119)
....+.+++.+++++|++||+++++++.+++++|++.|++++|||++|++++++ ++|+.+.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~ 94 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTI 94 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHH
Confidence 356677888999999999999999999999999999999999999999999876 3776543
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.57 E-value=7.8e-06 Score=46.30 Aligned_cols=30 Identities=27% Similarity=0.572 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14840 60 SVISFYSVIFVMSLLGNGLVCYAVLVSQKM 89 (119)
Q Consensus 60 ~~~~~~~~i~~~~~~gN~lvi~v~~~~~~l 89 (119)
++.++|.++|++|++||++++|++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 678899999999999999999999988753
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=29.94 E-value=51 Score=16.05 Aligned_cols=18 Identities=33% Similarity=0.905 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy14840 59 YSVISFYSVIFVMSLLGN 76 (119)
Q Consensus 59 ~~~~~~~~~i~~~~~~gN 76 (119)
+...+++..+++.|.+.|
T Consensus 9 y~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 9 YIVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHccccCC
Confidence 344455556666666554
Done!