Your job contains 1 sequence.
>psy14846
MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL
KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST
SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV
IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK
LHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIKMNETLKLELMMKLL
DRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFK
DDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPL
SKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLR
DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSER
VTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAV
LFAWNERPLDRFQNL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14846
(615 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 2188 1.0e-226 1
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 2188 1.0e-226 1
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 2185 2.1e-226 1
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 2184 2.7e-226 1
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 2182 4.4e-226 1
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 2182 4.4e-226 1
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 2179 9.2e-226 1
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 2137 2.6e-221 1
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 2137 2.6e-221 1
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 1708 1.8e-209 2
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 1665 2.7e-171 1
UNIPROTKB|F1P9Q4 - symbol:CUL5 "Uncharacterized protein" ... 1662 5.6e-171 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 1395 1.1e-142 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 726 8.6e-72 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 704 1.8e-69 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 693 2.7e-68 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 675 2.2e-66 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 640 1.1e-62 1
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 635 3.8e-62 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 629 1.6e-61 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 619 1.9e-60 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 613 8.1e-60 1
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 605 5.7e-59 1
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 605 5.7e-59 1
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 605 5.7e-59 1
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 605 5.7e-59 1
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 605 5.7e-59 1
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 605 5.7e-59 1
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 595 6.6e-58 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 346 7.9e-57 2
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 564 1.3e-54 1
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 534 3.0e-51 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 517 2.4e-49 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 454 4.0e-42 1
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 454 4.0e-42 1
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 400 9.8e-42 2
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 384 4.7e-38 2
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 289 9.4e-38 2
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 406 1.0e-37 1
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 260 2.0e-37 2
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 263 7.5e-37 2
UNIPROTKB|H0YCA0 - symbol:CUL5 "Cullin-5" species:9606 "H... 390 7.4e-36 1
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 408 9.0e-36 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 408 1.1e-35 1
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 310 1.6e-35 2
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 406 2.0e-35 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 406 2.0e-35 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 403 3.3e-35 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 403 3.7e-35 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 296 4.1e-35 2
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 403 4.6e-35 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 279 9.8e-35 2
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 287 1.4e-34 2
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 287 1.7e-34 2
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 287 1.8e-34 2
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 287 2.2e-34 2
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 287 2.3e-34 2
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 390 1.7e-33 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 389 2.1e-33 1
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 389 2.1e-33 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 275 9.1e-33 2
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 273 1.5e-32 2
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 277 1.5e-32 2
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 270 2.6e-32 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 258 4.0e-32 3
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 261 6.0e-32 3
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 276 6.4e-32 2
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 259 6.8e-32 3
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 259 7.0e-32 3
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 260 7.8e-32 3
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 260 7.8e-32 3
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 259 7.9e-32 3
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 259 7.9e-32 3
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 259 1.0e-31 3
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 373 1.5e-31 1
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 259 2.1e-31 3
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 270 3.8e-31 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 260 6.6e-31 3
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 270 7.7e-31 2
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 357 9.8e-30 1
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 346 2.1e-28 1
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 259 2.8e-27 3
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 336 2.9e-27 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 175 1.3e-26 3
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 320 1.6e-25 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 308 4.3e-24 1
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 212 5.0e-24 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 212 5.0e-24 2
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 279 3.3e-21 2
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 273 2.1e-20 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 244 8.3e-20 1
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 259 7.5e-19 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 256 1.5e-18 1
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 169 9.2e-18 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 239 9.5e-17 2
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 217 3.0e-14 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 148 1.6e-13 3
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 208 2.4e-13 3
UNIPROTKB|Q5T2B4 - symbol:CUL2 "Cullin-2" species:9606 "H... 173 3.8e-12 1
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 170 3.7e-10 1
WARNING: Descriptions of 7 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 2188 (775.3 bits), Expect = 1.0e-226, P = 1.0e-226
Identities = 429/622 (68%), Positives = 508/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI AL
Sbjct: 6 LLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGS- 124
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 125 ------NK-KSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 238 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ +GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 2188 (775.3 bits), Expect = 1.0e-226, P = 1.0e-226
Identities = 429/622 (68%), Positives = 508/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI AL
Sbjct: 6 LLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGS- 124
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 125 ------NK-KSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 238 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ +GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 2185 (774.2 bits), Expect = 2.1e-226, P = 2.1e-226
Identities = 427/622 (68%), Positives = 507/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W + F VH VCLWD+KGP+KI AL
Sbjct: 6 LLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDQFSDVHAVCLWDDKGPAKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI++FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S+
Sbjct: 66 KEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSS 125
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
+N E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 126 KKSN--------VEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEK+Y+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SVQ L +CCV LV+SFK TILAECP MI
Sbjct: 238 LREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ +GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT+++IE KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVEDFYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 2184 (773.9 bits), Expect = 2.7e-226, P = 2.7e-226
Identities = 429/622 (68%), Positives = 508/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+L +KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI AL
Sbjct: 2 LLTNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL 61
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI++FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 62 KEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGS- 120
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 121 ------NK-KSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 173
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 174 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 233
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 234 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 293
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ +GI PML+DLE HIV+AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 294 SLMDKVPNGIEPMLKDLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 353
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 354 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 413
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 414 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 473
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 474 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 533
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 534 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 593
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 594 FQLAVLFAWNQRPREKISFENL 615
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 2182 (773.2 bits), Expect = 4.4e-226, P = 4.4e-226
Identities = 429/622 (68%), Positives = 506/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KG SKI AL
Sbjct: 6 LLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSS- 124
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 125 ------NK-KSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 238 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 2182 (773.2 bits), Expect = 4.4e-226, P = 4.4e-226
Identities = 429/622 (68%), Positives = 506/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KG SKI AL
Sbjct: 6 LLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSS- 124
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 125 ------NK-KSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 238 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 2179 (772.1 bits), Expect = 9.2e-226, P = 9.2e-226
Identities = 428/622 (68%), Positives = 506/622 (81%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW M PIVLKLL+QE V++ +W +LF VH VCLWD+KG SKI AL
Sbjct: 6 LLKNKGSLQFEDKWDFMHPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSS- 124
Query: 121 SLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLV 180
NK K + E+S VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLV
Sbjct: 125 ------NK-KSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLV 177
Query: 181 IGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
IGVRESYVNLCSNPEDKLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAK
Sbjct: 178 IGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAK 237
Query: 241 LHEEELRACKYLESS---SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXX 297
L EEE RA +YLE+ +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 238 LKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Query: 298 XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
D++ +GI PML+DLE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+
Sbjct: 298 SLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKE 357
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLR 416
AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLR
Sbjct: 358 AFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLR 417
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMV 476
KTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMV
Sbjct: 418 KTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMV 477
Query: 477 EWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWA 535
EWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+
Sbjct: 478 EWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTT
Sbjct: 538 RSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTT 597
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQ+AVLFAWN+RP ++ F+NL
Sbjct: 598 FQLAVLFAWNQRPREKISFENL 619
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 2137 (757.3 bits), Expect = 2.6e-221, P = 2.6e-221
Identities = 420/606 (69%), Positives = 496/606 (81%)
Query: 17 MRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVL 76
MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI ALKEDI+ FI+ AQ RVL
Sbjct: 1 MRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVL 60
Query: 77 AHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQKISAEES 136
+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S NK K + E+S
Sbjct: 61 SHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGS-------NK-KSNVEDS 112
Query: 137 TVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPED 196
VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLVIGVRESYVNLCSNPED
Sbjct: 113 IVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPED 172
Query: 197 KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESS- 255
KLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAKL EEE RA +YLE+
Sbjct: 173 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 232
Query: 256 --SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQD 313
+SV+ L +CCV LV+SFK TILAEC MI D++ +GI PML+D
Sbjct: 233 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 292
Query: 314 LEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAY 373
LE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+AF+DDPRFLTARDKAY
Sbjct: 293 LEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAY 352
Query: 374 KNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESK 432
K VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLRKTPLSK+LT++EIE+K
Sbjct: 353 KAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAK 412
Query: 433 LRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKL 492
L+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMVEWLR+VGMPADYVNKL
Sbjct: 413 LKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 472
Query: 493 ARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWARGSERVTVSLPLELED 551
ARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+R SE+V VSLP ELED
Sbjct: 473 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELED 532
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTTFQ+AVLFAWN+RP ++
Sbjct: 533 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREK 592
Query: 612 --FQNL 615
F+NL
Sbjct: 593 ISFENL 598
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 2137 (757.3 bits), Expect = 2.6e-221, P = 2.6e-221
Identities = 420/606 (69%), Positives = 496/606 (81%)
Query: 17 MRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVL 76
MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI ALKEDI+ FI+ AQ RVL
Sbjct: 1 MRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVL 60
Query: 77 AHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQKISAEES 136
+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S NK K + E+S
Sbjct: 61 SHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGS-------NK-KSTVEDS 112
Query: 137 TVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPED 196
VR LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLVIGVRESYVNLCSNPED
Sbjct: 113 IVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPED 172
Query: 197 KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESS- 255
KLQIYR++FEKAY+ +TE FY +A +LQ NGV++YMKYADAKL EEE RA +YLE+
Sbjct: 173 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 232
Query: 256 --SSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQD 313
+SV+ L +CCV LV+SFK TILAEC MI D++ +GI PML+D
Sbjct: 233 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 292
Query: 314 LEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAY 373
LE HI++AGLADM+A+A+ IT DSEKYVE+LL LFN+FSKLVK+AF+DDPRFLTARDKAY
Sbjct: 293 LEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAY 352
Query: 374 KNVVNDTTVFKLELPTKQC-TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESK 432
K VVND T+FKLELP KQ G+KT PESKCPELLANYCDMLLRKTPLSK+LT++EIE+K
Sbjct: 353 KAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAK 412
Query: 433 LRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKL 492
L+ VLLVLKYVQNKDVFMR+HKAHLTRRLILD SADSE EENMVEWLR+VGMPADYVNKL
Sbjct: 413 LKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKL 472
Query: 493 ARMFQDIKVSQDLNYQFKQSYRGSKGSI-GDSINIKILNAGAWARGSERVTVSLPLELED 551
ARMFQDIKVS+DLN FK+ ++ +K ++ DS+NIKILNAGAW+R SE+V VSLP ELED
Sbjct: 473 ARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELED 532
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
IPEVE+FYKK HSGRKL W+H MSNG ITF NEVG+YDL+VTTFQ+AVLFAWN+RP ++
Sbjct: 533 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREK 592
Query: 612 --FQNL 615
F+NL
Sbjct: 593 ISFENL 598
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 1708 (606.3 bits), Expect = 1.8e-209, Sum P(2) = 1.8e-209
Identities = 337/502 (67%), Positives = 410/502 (81%)
Query: 120 TSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQL 179
+S ++ + +K E+S VR LMLDSWN+ IF+DIK RLQ+SAMK+V +ERNG+A+D+QL
Sbjct: 195 SSSSSTSTSKKNPTEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQL 254
Query: 180 VIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADA 239
V+GVRESYVNL SN EDKL+IYRE+FE AY+ AT FY +K+AE Q NGV +YMKYAD+
Sbjct: 255 VVGVRESYVNLSSNAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADS 314
Query: 240 KLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXX 299
KL EEE+RA +YLE SS +LT V VL+ N+I+AECP +I
Sbjct: 315 KLREEEVRAKRYLEPSS-FSILTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRL 373
Query: 300 XDRIKDGI--TPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
DR+ G+ PM+ DL+ HI++AGLADM++++++ITQDSEKYVERLLELFN+FS LV++
Sbjct: 374 MDRVMHGVGVEPMMGDLQRHIMSAGLADMLSASEVITQDSEKYVERLLELFNKFSDLVRN 433
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCT-GIK-TLPESKCPELLANYCDMLL 415
AF DDPRFLTARD A+K VVNDT+VFK+ELPT G+K T PESKCPELLANYCDMLL
Sbjct: 434 AFNDDPRFLTARDIAFKTVVNDTSVFKMELPTSIANRGVKYTAPESKCPELLANYCDMLL 493
Query: 416 RKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENM 475
R+TPLSKRLT+++I+++LR+VLLVLKYV NKDVFMR+HK HLTRRLIL TSADSEKEE++
Sbjct: 494 RRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDI 553
Query: 476 VEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWA 535
VEWLR+VGMPADYVN+LARMFQDIKVS+DLN QF+ S S D+INIKILNAGAWA
Sbjct: 554 VEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSI-----SRHDAINIKILNAGAWA 608
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTT 595
R SERV+VSLP+ELEDYIP+VE+FYKKKHSGRKLQWYHHMSNGTITF N G+YDLDVTT
Sbjct: 609 RCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFVNNFGRYDLDVTT 668
Query: 596 FQMAVLFAWNERPLDR--FQNL 615
FQMAVLFAWN+R D+ ++NL
Sbjct: 669 FQMAVLFAWNQRQHDKISYENL 690
Score = 340 (124.7 bits), Expect = 1.8e-209, Sum P(2) = 1.8e-209
Identities = 67/124 (54%), Positives = 84/124 (67%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIR 69
FE+ WP R IVLKLL+Q+ VSQ EWQ+LF+ VH VCLWDEKG +KI D L++DI+ FI
Sbjct: 13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCLWDEKGAAKIYDCLQQDIVEFIV 72
Query: 70 HAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQ 129
AQ +V A +QALL YI EW KF Q +YLP PFRQLE S V S + +++
Sbjct: 73 QAQSQVQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQS---PQVKPSSSGSSSSA 129
Query: 130 KISA 133
+SA
Sbjct: 130 SVSA 133
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
Identities = 360/642 (56%), Positives = 445/642 (69%)
Query: 1 MLKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDAL 60
+LK+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI AL
Sbjct: 6 LLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL 65
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
KEDI++FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF +LE +L+ S
Sbjct: 66 KEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFSKLEITLLGNQGSN 125
Query: 121 SLTNNNNK--QKISAE---ES---TVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNG 172
+N + +K+ + ES ++ + DS + + + DS +LV R
Sbjct: 126 KKSNVEDSIVRKLMLDTWNESIFCNIKSRLQDSAMKLVHAERLGEAFDS--QLVIGVR-- 181
Query: 173 EAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVES 232
E++ + L + N E Y + E+ Y S+ +QN +
Sbjct: 182 ESYVN-LCSNTDDKLQIYRENFEKS---YLDSTERFYKTQAPSYLQQNG---VQNYMKYA 234
Query: 233 YMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXX 292
K + + + LR + +SVQ L +CCV LV+SFK TIL ECP MI
Sbjct: 235 DGKLREEE--KRALRYLETRRECNSVQALMECCVNALVTSFKETILTECPGMIKRNETES 292
Query: 293 XXXXXXXX---------------DRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDS 337
D++ GI PML+DLE HI++AGLADM+ASA+ IT DS
Sbjct: 293 EYGRSSGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTDS 352
Query: 338 EKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIK 396
EKYVE+LL LFN+FSKLVK+AF+DDPRFLT+RDKAYK VVND T+FKLELP KQ +K
Sbjct: 353 EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAVVNDATIFKLELPLKQKGVSLK 412
Query: 397 TLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAH 456
T PESKCPELLANYCDMLLRKTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAH
Sbjct: 413 TQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAH 472
Query: 457 LTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGS 516
LTRRLILD SADSE EENMVEWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +
Sbjct: 473 LTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHN 532
Query: 517 KGSI-GDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHM 575
K ++ DS+NIKILNAGAW+R SE+V VSLP ELED IPEVEDFYKK HSGRKL W+H M
Sbjct: 533 KLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLM 592
Query: 576 SNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR--FQNL 615
SNG ITF NEVG+YDL+VTTFQ+AVLFAWN+RP +R F+NL
Sbjct: 593 SNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENL 634
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 1662 (590.1 bits), Expect = 5.6e-171, P = 5.6e-171
Identities = 357/640 (55%), Positives = 447/640 (69%)
Query: 3 KDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKE 62
K+KG+ FEDKW MRPIVLKLL+QE V++ +W +LF VH VCLWD+KGP+KI ALKE
Sbjct: 3 KNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKE 62
Query: 63 DIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST-- 120
DI+ FI+ AQ RVL+H++D ALLKAYI EW KF QC LP PF QLE +L+ K S
Sbjct: 63 DILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKK 122
Query: 121 SLTNNNNKQKISAEE------STVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
S ++ +K+ + S ++ + DS + + + DS +LV R E+
Sbjct: 123 STVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS--QLVIGVR--ES 178
Query: 175 FDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYM 234
+ + + E + + + +K Y + E+ Y S+ +QN +
Sbjct: 179 YVN--LCSNPEDKLQIYRDNFEKA--YLDSTERFYRTQAPSYLQQNG---VQNYMKYADA 231
Query: 235 KYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXX 294
K + + + LR + +SV+ L +CCV LV+SFK TILAEC MI
Sbjct: 232 KLKEEE--KRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETESRY 289
Query: 295 XXX---------------XXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEK 339
D++ +GI PML+DLE HI++AGLADM+A+A+ IT DSEK
Sbjct: 290 QYLCVEDGSGFSELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEK 349
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQC-TGIKTL 398
YVE+LL LFN+FSKLVK+AF+DDPRFLTARDKAYK VVND T+FKLELP KQ G+KT
Sbjct: 350 YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQ 409
Query: 399 PESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLT 458
PESKCPELLANYCDMLLRKTPLSK+LT++EIE+KL+ VLLVLKYVQNKDVFMR+HKAHLT
Sbjct: 410 PESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLT 469
Query: 459 RRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKG 518
RRLILD SADSE EENMVEWLR+VGMPADYVNKLARMFQDIKVS+DLN FK+ ++ +K
Sbjct: 470 RRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKL 529
Query: 519 SI-GDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSN 577
++ DS+NIKILNAGAW+R SE+V VSLP ELED IPEVE+FYKK HSGRKL W+H MSN
Sbjct: 530 ALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 589
Query: 578 GTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR--FQNL 615
G ITF NEVG+YDL+VTTFQ+AVLFAWN+RP ++ F+NL
Sbjct: 590 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENL 629
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
Identities = 292/609 (47%), Positives = 406/609 (66%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIR 69
F+++W PIV LL Q+ V+ WQ+LFY V+ + W + GP KI D L I +++
Sbjct: 3 FDEEWSKADPIVHALLHQKSVTPAAWQDLFYHVYKITSWVDDGPLKIRDILTRCINDYVH 62
Query: 70 HAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQ 129
A +R+ + + D +LL YI+EW++F Q + LP PF++++ S +SV +
Sbjct: 63 EANKRIRSLQTDGSLLIGYIKEWNRFYQQANILPLPFKKIDESSRRRSVPET-------- 114
Query: 130 KISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVN 189
EES +R +ML+ WN+ IF +I ++L A++LV+ ER+G D+Q VIG+RES+V
Sbjct: 115 ---PEES-IRTVMLEKWNEIIFMNISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVA 170
Query: 190 LCSNP-EDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRA 248
L ED L +YR+ FE+ +I T +Y L GV YM YAD KL EE+ RA
Sbjct: 171 LNDRAGEDPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRA 230
Query: 249 CKYLESSSSVQ-LLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGI 307
+YLE +S + V LV SF++TILAEC K+I R + GI
Sbjct: 231 KRYLEMNSPTSGKHMEKAVIALVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGI 290
Query: 308 TPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLT 367
+L+ ++ HI GL DM +A+ ++ D E+YV++LL +F++FS LV++ F DD R LT
Sbjct: 291 DTVLKCIDTHIRTEGLNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLT 350
Query: 368 ARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP-ESKCPELLANYCDMLLRKTPLSKRLTA 426
ARDKA++ VVND+++FK E+ K+ G +TL ESKC ELLANYCD+LLRKT LSK+LT+
Sbjct: 351 ARDKAFRAVVNDSSIFKTEMMNKK--G-RTLSVESKCAELLANYCDLLLRKTQLSKKLTS 407
Query: 427 DEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPA 486
+EI+ KL VLLVLKYV+NKDVFMRFH+AHL+RRLIL+ SAD EKEE MV LR+ GMP+
Sbjct: 408 EEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMPS 467
Query: 487 DYVNKLARMFQDIKVSQDLNYQFKQSYRGSKG--SIGDSINIKILNAGAWARG-SERVTV 543
D VNKL+RM QDI++++D+N FK++ G+ SI DSIN+K+LN GAW RG SER+
Sbjct: 468 DAVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIRF 527
Query: 544 SLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSN-EVGKYDLDVTTFQMAVLF 602
SLP ELED++PE+E FYKK+H+GRKL W HH S+GT+ F G++DL+ TTFQMAVLF
Sbjct: 528 SLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLF 587
Query: 603 AWNERPLDR 611
+N+R D+
Sbjct: 588 CFNDRAHDK 596
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 185/556 (33%), Positives = 288/556 (51%)
Query: 60 LKEDIMNFIRHAQQRVLAHEED---QALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNK 116
L + + +F+R +L ED +++LK Y Q+W + L L V +
Sbjct: 86 LYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLDGICAYLNRHWVRR 145
Query: 117 SVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFD 176
+ ++ I S L L +W + +F + +++ ++ +KLV+ ERNGE +
Sbjct: 146 EC------DEGRKGIYEIYS----LALVTWRECLFRPLNKQVTNAVLKLVEKERNGETIN 195
Query: 177 SQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNNGV 230
++LV GV +SYV L N +D L +Y+E+FE ++A TE FYT ++ EFLQ N V
Sbjct: 196 TRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFLQQNPV 255
Query: 231 ESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXX 290
YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 TEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDADKN 314
Query: 291 XXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQ 350
RI DG+ + + LE+HI N GLA + D D + YV+ L++ +
Sbjct: 315 EDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKK 374
Query: 351 FSKLVKDAFKDDPRFLTARDK-AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLAN 409
++ LV AF +D F+ A DK A +N+ V ++ + SK PELLA
Sbjct: 375 YNALVMSAFNNDAGFVAALDKVACGRFINNNAVTRMAQSS-----------SKSPELLAR 423
Query: 410 YCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADS 469
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 YCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASD 481
Query: 470 EKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKIL 529
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++L
Sbjct: 482 DAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSE-PLDLDFSIQVL 539
Query: 530 NAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKY 589
++G+W + T +LP ELE FY +HSGRKL W +H+S G + + +Y
Sbjct: 540 SSGSWPF-QQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRY 598
Query: 590 DLDVTTFQMAVLFAWN 605
L +TFQMA+L +N
Sbjct: 599 TLQASTFQMAILLQFN 614
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 180/568 (31%), Positives = 286/568 (50%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ A + +L+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY-AKMLAKLVHQNSAS 480
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD-SINIK 527
+ E +M+ +Y +KL RMFQDI VS+DLN QFK+ S+ +I+
Sbjct: 481 DDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDSPVDFSIQ 540
Query: 528 ILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVG 587
+L++G+W + T +LP ELE FY +HSGRKL W + +S G + +
Sbjct: 541 VLSSGSWPF-QQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKN 599
Query: 588 KYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+Y L +TFQMA+L +N Q L
Sbjct: 600 RYTLQASTFQMAILLQYNTEDAYAVQQL 627
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 180/631 (28%), Positives = 315/631 (49%)
Query: 5 KGTQTFEDKWPSMRPIVLKLLQQ--EPVSQNEWQNLFYAVHVVCLWDE-KGPSKI----- 56
K + +D WP + + K++ + + +W L+ V+ C + K +K+
Sbjct: 10 KRSVKLDDIWPELEEGIYKIITDLNKGFPKQKWIALYTHVYDYCAASQSKSSAKVGMPKQ 69
Query: 57 ----VDALKEDIMN----FIRHAQQRVLAHEE---DQALLKAYIQEWSKFLAQCSYLPTP 105
+ + ED+ N F++ ++L E D+ LL Y EW ++ + Y+
Sbjct: 70 QASGANYVGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNI 129
Query: 106 FRQLETSLVNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKL 165
F+ + + + + ++ K+++ + +L L W +F +KQRL +S + +
Sbjct: 130 FQYMNRYWIKREI------DDGKKEVYE----IFILSLVIWRDCLFTPLKQRLTNSLLDI 179
Query: 166 VQSERNGEAFDSQLVIGVRESYVNLCSN---PEDK-LQIYREHFEKAYIAATESFYTVKA 221
++SERNG ++ L+ GV YV+L N P++ LQ+Y+ FE+ ++ ATE++YT ++
Sbjct: 180 IESERNGYQINTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNES 239
Query: 222 AEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAEC 281
A+F+ N V YMK + +L+EE R +YL ++ +L+ C VL+ I E
Sbjct: 240 AKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKC-EKVLIEKHVEVIWNEF 298
Query: 282 PKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGL--ADMIASADIITQDSEK 339
++ RI G+ P+ LE H+ N GL IA+ +I + +
Sbjct: 299 QTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVSSIATNGVI--EPKV 356
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
Y+E LL++F ++++LV AF+ D F+ + DKA + +N+ V I
Sbjct: 357 YIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVT-----------IAAKS 405
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
SK PELLA + D LL+K+P + E+E L +V++V KY+++KDVF F+ L +
Sbjct: 406 SSKSPELLARFTDFLLKKSPNNPE--ESEMEQLLNDVMIVFKYIEDKDVFQDFYSKMLAK 463
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRG-SKG 518
RLI TS + E M+ L+ +Y +KL RMF D+ +S++L +F +
Sbjct: 464 RLIHGTSTSEDLEGTMIGKLKST-CGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERS 522
Query: 519 SIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
S+ ++ +L G+W S+P EL+ + FY+ +HSGRKL W HH+S G
Sbjct: 523 SLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKG 582
Query: 579 TI-TFSNEVGK--YDLDVTTFQMAVLFAWNE 606
+ T + K Y L +T+Q+ VL +N+
Sbjct: 583 ELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQ 613
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 191/627 (30%), Positives = 301/627 (48%)
Query: 11 EDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLW---DEKGPSKIVDALKED---- 63
++ W ++R + ++ ++ + ++ + L+ ++ CL+ + SK L+ED
Sbjct: 18 DELWDNIRAGIQQVYARQSMVKSRYIELYTLLYNHCLYVSPQAQTQSKKGQKLREDKTVG 77
Query: 64 ------IMNFIRHAQQRVLAHEEDQ---ALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
I F+++ + ED +LK Y Q+W + L +L L+
Sbjct: 78 FELYKRIKEFLKNHLTNLPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGICARLNKHLL 137
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
N TNN + L + +W +F + +++ ++ +KL++ ERNGE+
Sbjct: 138 NS------TNNEGHNVCE-----IYSLAMVTWRDCLFRPLNKQVTNAVLKLIEKERNGES 186
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ G +SY+ L N +++ L +Y+E FE ++A TE +YT K+ E LQ N
Sbjct: 187 INTRLISGAIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQN 246
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK +A L EE RA YL SS +L C VLV L E ++
Sbjct: 247 PVTEYMKKVEALLLEERRRARVYLHQSSKGKLARKCR-QVLVEKHLEIFLTEFQNLLNAN 305
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RIK+G+ + LE HI N GL+ + + D YVE +L +
Sbjct: 306 KSEDLGRMYRLIYRIKNGLGEFKKILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIH 365
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF++ F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 366 KKYNALVISAFRNHADFVAALDKACSGFINNNAVTKMAQSS-----------SKSPELLA 414
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L +V+ V KY+ +KDV +F+ L +RL+ SA
Sbjct: 415 QYCDSLLKKS--SKNPEEAELEDTLNHVMTVFKYMDDKDVVQKFYTKMLAKRLVHQNSAS 472
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +MV L+ +Y +KL RMFQDI VS+ LN QFK+ S+ + +I +
Sbjct: 473 DDAEASMVSKLKQA-CGFEYTSKLQRMFQDIGVSKALNAQFKKHLMDSE-PLDLDFSIHV 530
Query: 529 LNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGK 588
L+ G W E TV LP ELE FY +S RKL W + +S G + +
Sbjct: 531 LSYGWWPF-EESCTVLLPSELEPCYRRFTAFYASCYSDRKLSWAYQLSEGELVTNYFKNN 589
Query: 589 YDLDVTTFQMAVLFAWNERPLDRFQNL 615
Y L V+TFQMA+L +N Q L
Sbjct: 590 YTLRVSTFQMAILLQYNTEDAYTIQQL 616
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 165/535 (30%), Positives = 263/535 (49%)
Query: 84 LLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQKISAEESTVRVLML 143
LLK Y EW F + F L + + + + + I V L L
Sbjct: 111 LLKYYTTEWENFRISSKVMDGIFAYLNRHWIRREL------DEGHENIYM----VYTLAL 160
Query: 144 DSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPED------- 196
W +++FND+K ++ D+ ++L++SER G +S+ + GV E V L + +
Sbjct: 161 VVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDA 220
Query: 197 ---KLQIYREHFEKAYIAATESFYTVKAAEFLQNNG-VESYMKYADAKLHEEELRACKYL 252
KL +Y+E FE ++ AT FYT +AA FL N G V YM + +L++E+ R YL
Sbjct: 221 ETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYL 280
Query: 253 ESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQ 312
SS+ L T CC +VL+S+ + + ++ DR+ +G+ + +
Sbjct: 281 NSSTKTPLAT-CCESVLISNQLDFLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRK 339
Query: 313 DLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKA 372
LE HI G + A D++ YV+ LLE+ ++ LV +FK++P F+ + DKA
Sbjct: 340 SLENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKA 399
Query: 373 YKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESK 432
+ +N+ V K P Q T K ELLA YCD LLRK+ SK E+E
Sbjct: 400 ATSFINNNAVTKRAPPQAQLT--------KSAELLARYCDQLLRKS--SKMPDEAELEEL 449
Query: 433 LRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKL 492
+++V KY+ +KDVF +F+ ++RLI + SA E E N + L+ + +Y +L
Sbjct: 450 QTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSM-CGYEYTARL 508
Query: 493 ARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDY 552
++M D +VS+DL FK+ G N+ +L++G+W ++LP +L
Sbjct: 509 SKMVNDTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPT-FPTTPITLPQQLSKT 567
Query: 553 IPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNER 607
I FY +K +GR+L W + S G IT + KY TT QM + +NE+
Sbjct: 568 IEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQ 622
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 174/617 (28%), Positives = 301/617 (48%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIM-NF 67
F++ W + + ++ + V + W + F ++ +C+ + E P + + I N
Sbjct: 11 FDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPE--PVRREPYTETKIFENH 68
Query: 68 IRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNN 127
+ H +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 69 VHHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYG 126
Query: 128 KQKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRE 185
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV
Sbjct: 127 YGGVDMNEPLMEIGELALDMWRKLMIEPLQAILIRMLLREIKNDRCGEDPNQKVIHGVIN 186
Query: 186 SYVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEE 244
S+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +E
Sbjct: 187 SFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDE 246
Query: 245 ELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIK 304
E+R KYL SS +++ +C +V+ + AEC +I +
Sbjct: 247 EMRCRKYLHPSSYGKVIHECQQR-MVADHLQFLHAECHNIIRQEKRNDMANMYTLLRAVS 305
Query: 305 DGITPMLQDLEAHIVNAGLADMIASADIITQDSE-KYVERLLELFNQFSKLVKDAFKDDP 363
G+ M+Q+L+ HI + GL A++++ ++ ++VE +LE+ ++F +L+ D
Sbjct: 306 SGLPHMIQELQNHIHDEGLR---ATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELL--ANYCDMLLRKTPLS 421
F++A DKA +VVN P C K PELL A YCD LL+K+ +
Sbjct: 363 HFMSALDKALTSVVN------YREPKSIC---------KAPELLELAKYCDNLLKKS--A 405
Query: 422 KRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRD 481
K +T +E+E KL + + V KY+ +KDVF +F+ L +RLI S + EE M+ L+
Sbjct: 406 KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQ 465
Query: 482 VGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI--GDSINIKILNAGAWA-RGS 538
++ +KL RM+ D+ VS DLN +F + I G S I +L AGAW +
Sbjct: 466 A-CGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQIYVLQAGAWPLTQA 524
Query: 539 ERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQM 598
T ++P ELE + E FY + SGRKL W H++ G + + Y VTT+QM
Sbjct: 525 PSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQM 584
Query: 599 AVLFAWNERPLDRFQNL 615
AVL A+N ++ L
Sbjct: 585 AVLLAFNNSETVSYKEL 601
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 175/614 (28%), Positives = 296/614 (48%)
Query: 20 IVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDA------LKEDIMNFIRHAQQ 73
+++KL ++ V + L+ AVH C + + + A L E++ +
Sbjct: 28 VMVKL--EDGVDMKNYMALYTAVHNFCTSHKAVSGQAIQAQRGAHLLGEELYRKLGEYLS 85
Query: 74 RVL--AHEE-----DQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNN 126
R L H E D+ALL YI+EW ++ Y+ FR L V + + +
Sbjct: 86 RHLEWVHGESMGHTDEALLSFYIREWQRYTTAAKYINHLFRYLNRHWVKREI------DE 139
Query: 127 NKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
K+ + V L W + F + +++ + +KLV+ +RNGE + + + +S
Sbjct: 140 GKKNVY----DVYTQHLVKWKEDFFLKVHEKVMGAVLKLVEKQRNGETIEQSRIKSIVDS 195
Query: 187 YVNLCSNPEDK----LQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLH 242
+V+L + D L+IYR +F++ ++ AT +Y ++ +F+ +N V YMK A+ +L
Sbjct: 196 FVSLGLDETDPTKSTLEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLE 255
Query: 243 EEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDR 302
EE+ R YL + S L T C+ VLV++ + E ++ R
Sbjct: 256 EEKARVGLYLNNDISKDL-TSTCLDVLVTAHSELLRDEFQPLLDNERQDDLARMYRLLSR 314
Query: 303 IKDGITPMLQDLEAHIVNAGLADMI-ASADIITQDSEKYVERLLELFNQFSKLVKDAFKD 361
IKDG+ P+ EAH+ AGL+ + +A+ + + + YV+ LL + ++ LVK+AF
Sbjct: 315 IKDGLDPLRTKFEAHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNG 374
Query: 362 DPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLS 421
+ F+ + D A + VN + K +G +K PELLA Y D LL++ S
Sbjct: 375 ESEFVRSLDNACREFVNRNKICK--------SG-----STKTPELLAKYTDSLLKRG--S 419
Query: 422 KRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRD 481
K E+E L ++ V KY+++KDVF +F+ L +RL+ +S + E +M+ L++
Sbjct: 420 KAAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKE 479
Query: 482 VGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGS------KGSIGDSINIKILNAGAWA 535
+Y NKL RMFQDI++S+DLN +K S + + DS + +IL G W
Sbjct: 480 A-CGFEYTNKLQRMFQDIQISKDLNSSYKDWLEKSFLDDDDRKKLVDS-HFQILGTGFWP 537
Query: 536 RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTIT---FSNEVGKYDLD 592
+ + P E+ + FY KH+GRKL W + G + N Y
Sbjct: 538 LTAPSTSFLAPPEIVKTSERFQKFYCDKHNGRKLTWLWQLCKGELKANYIKNTKVPYTFL 597
Query: 593 VTTFQMAVLFAWNE 606
V+T+QM +L +NE
Sbjct: 598 VSTYQMGILLLFNE 611
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 177/616 (28%), Positives = 296/616 (48%)
Query: 1 MLKDKGTQT--FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYA-VHVVCLWDEKGPSKIV 57
M+ G Q F W ++ V K+L SQN Y V+ +C+ P
Sbjct: 1 MMNGLGRQDIDFNTIWKNIADQVYKILTG---SQNVSAMFLYEDVYKLCIAQ---PQPYC 54
Query: 58 DALKEDIMNFI-RHAQQRVLAHEEDQA-LLKAYIQEWSKFLAQCSYL-PTPFRQLETSLV 114
+ L E+I F +H Q +L + ++ + Y+++W F + C FR L + +
Sbjct: 55 EPLYENIKKFFEQHVDQILLIILDTKSDTISEYLKQWKLFFSGCELCNKVIFRYLNLNWI 114
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
NK + + K + +++L L W + +F IK R+ L+Q +R+GE
Sbjct: 115 NKKIL------DKKFGHPPDVYEIQILGLMIWKERLFFKIKDRVLKCVEILIQKDRDGEL 168
Query: 175 FDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYM 234
Q + ES + L S +D+ +Y +E +Y+ T FYT ++ F+ ++G+ SYM
Sbjct: 169 VQHQFISQFMESLIKLDSVDKDRT-LYLIEYEASYLENTRQFYTRESVAFIASSGISSYM 227
Query: 235 KYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXX 294
K A+ ++ EEE R+ KYL SSS ++ ++L+ K + +EC +
Sbjct: 228 KKAETRIDEEEQRSQKYLNSSSHDKMRR-LLHSILIEKHKELLQSECINYLKDEKLDEIY 286
Query: 295 XXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASA-DIITQDSEKYVERLLELFNQFSK 353
RI+ G+ P+L+ ++ +I + G+ D I S D D + YVE LL+++ QFS
Sbjct: 287 NMYKLLSRIEGGLAPVLETVQKYIQHVGI-DAIKSIPDRNNPDPKIYVETLLKIYLQFSS 345
Query: 354 LVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDM 413
++K +F +D F+T D A + N + T+ T K PELLA YCDM
Sbjct: 346 IIKKSFNNDVSFITVLDLACHKIFNQNHI------TRNTT--------KSPELLAKYCDM 391
Query: 414 LLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEE 473
LL+K +K+ E+E KL ++++ KYV +KDVF +F+ L+RRLI TS + E+
Sbjct: 392 LLKKG--NKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEK 449
Query: 474 NMVEWLRDV-GMP--ADYVNKLARMFQDIKVSQDL-NYQFKQSYRGSKGSIGDSINIKIL 529
M+ L+ G + + + + +++ N+ K S S G I +I +L
Sbjct: 450 FMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSL--SIGKI--DFSILVL 505
Query: 530 NAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKY 589
+G+W+ S+ + +P EL I + +Y +H GRKL W HH+ Y
Sbjct: 506 TSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSY 565
Query: 590 DLDVTTFQMAVLFAWN 605
D VT FQ+ +L +N
Sbjct: 566 DFQVTNFQLGILLIFN 581
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 154/486 (31%), Positives = 253/486 (52%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 92 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 146
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ +K + E + L L +W + +F + +++ ++ +KL++ ERNGE
Sbjct: 147 RRECDEG-------RKGTYE---IYSLALVTWRECLFRPLNKQVTNAVLKLIEKERNGET 196
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E+FE ++A TE FYT ++ EFLQ N
Sbjct: 197 INTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQN 256
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 257 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 315
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 316 KNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVH 375
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ +++ SK PELLA
Sbjct: 376 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKM---------VQS--SSKSPELLA 424
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 425 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 482
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 483 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 540
Query: 529 LNAGAW 534
L++G+W
Sbjct: 541 LSSGSW 546
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 149/484 (30%), Positives = 242/484 (50%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W + +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 163 LALVTWRECLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 221
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y E+ + F E +++ + ++ A + LE VQ+
Sbjct: 222 -KGPTLSVYKEYFETQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 278
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI DG+ +
Sbjct: 279 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELK 338
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 339 KLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDK 398
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ +++ SK PELLA YCD LL+K+ SK E+E
Sbjct: 399 ACGRFINNNAVTKM---------VQS--SSKSPELLARYCDSLLKKS--SKNPEEAELED 445
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 446 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 504
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 505 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 562
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W +H+S G + + +Y L +TFQMA+L +N +
Sbjct: 563 SYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDVYT 622
Query: 612 FQNL 615
Q L
Sbjct: 623 VQQL 626
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYA 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYA 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYT 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYT 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYT 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 154/486 (31%), Positives = 250/486 (51%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++ ++ +KL++ ERNGE
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195
Query: 175 FDSQLVIGVRESYVNLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQNN 228
+++L+ GV +SYV L N +D L +Y+E FE ++A TE FYT ++ EFLQ N
Sbjct: 196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQN 255
Query: 229 GVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXX 288
V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 PVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDAD 314
Query: 289 XXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELF 348
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 KNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVH 374
Query: 349 NQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLA 408
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELLA
Sbjct: 375 KKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELLA 423
Query: 409 NYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSAD 468
YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 RYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSAS 481
Query: 469 SEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKI 528
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I++
Sbjct: 482 DDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQV 539
Query: 529 LNAGAW 534
L++G+W
Sbjct: 540 LSSGSW 545
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 149/484 (30%), Positives = 239/484 (49%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L L +W +F + +++ ++ +KL++ ERNGE +++L+ GV +SYV L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFA- 220
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
+ Y + ES + F E +++ + ++ A + LE VQ+
Sbjct: 221 -KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQV 277
Query: 261 ---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML 311
L C VL+ E ++ RI+DG+ +
Sbjct: 278 YLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELK 337
Query: 312 QDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDK 371
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A DK
Sbjct: 338 KLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDK 397
Query: 372 AYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIES 431
A +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 ACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELED 444
Query: 432 KLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNK 491
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +K
Sbjct: 445 TLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTSK 503
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELED 551
L RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 LQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELER 561
Query: 552 YIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDR 611
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 SYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYT 621
Query: 612 FQNL 615
Q L
Sbjct: 622 VQQL 625
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 168/576 (29%), Positives = 277/576 (48%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
K+ D L++ + +++ + A ++ LL Y ++W SY Q ++++
Sbjct: 77 KLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWK------SY------QFSSTVL 124
Query: 115 NKSVSTSLTNNNNKQKIS-AEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERN 171
+ + L N K++ ++ ++ L L +W +F + + + + +K ++ ER
Sbjct: 125 D-GICNYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQ 183
Query: 172 GEAFDSQLVIGVRESYVNLCSNPED------KLQIYREHFEKAYIAATESFYTVKAAEFL 225
G+ + LV V E YV L N ED KL +Y+++FE +IA T +FY ++ FL
Sbjct: 184 GKLINRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFL 243
Query: 226 QNNGVESYMKYADAKLHEEELRA--------CKYLESSSSVQLLTDCCVTVLVSSFKNTI 277
N V Y+K+ + +L EE R YL +++ +L C VL+
Sbjct: 244 STNTVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTA-DVLKSTCEEVLIEKHLKIF 302
Query: 278 LAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADII--TQ 335
E ++ +T + LE HI++ G + IA
Sbjct: 303 HTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQG-TEAIAKCCTTDAAN 361
Query: 336 DSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGI 395
D + YV+ +L++ +++ LV AF +D F+ A DKA +N V T
Sbjct: 362 DPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVV----------TIA 411
Query: 396 KTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKA 455
+ SK PELLA YCD+LL+K+ SK E+E L V++V KY+++KDVF +++
Sbjct: 412 NSA--SKSPELLAKYCDLLLKKS--SKNPEDKELEDNLNQVMVVFKYIEDKDVFQKYYSK 467
Query: 456 HLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRG 515
L +RL+ TSA + E M+ L+ +Y KL RMFQDI VS+DLN FKQ Y
Sbjct: 468 MLAKRLVNHTSASDDAEAMMISKLKQT-CGYEYTVKLQRMFQDIGVSKDLNSYFKQ-YLA 525
Query: 516 SKG-SIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHH 574
K ++ I++L++G+W LP ELE + + +FY +HSGRKL W +
Sbjct: 526 EKNLTMEIDFGIEVLSSGSWPFQLSN-NFLLPSELERSVRQFNEFYAARHSGRKLNWLYQ 584
Query: 575 MSNGTITFS---NEVGKYDLDVTTFQMAVLFAWNER 607
M G + + N Y L +TFQM+VL +N++
Sbjct: 585 MCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQ 620
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 346 (126.9 bits), Expect = 7.9e-57, Sum P(2) = 7.9e-57
Identities = 83/213 (38%), Positives = 119/213 (55%)
Query: 407 LANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTS 466
LA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF +F+ L +RLI S
Sbjct: 371 LAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLS 428
Query: 467 ADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI--GDSI 524
+ EE M+ L+ ++ +KL RM+ D+ VS DLN +F R I G S
Sbjct: 429 MSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGISF 487
Query: 525 NIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFS 583
I +L AGAW + T ++P ELE + E FY + SGRKL W H++ G +
Sbjct: 488 QIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKM- 546
Query: 584 NEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 547 NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 579
Score = 313 (115.2 bits), Expect = 7.9e-57, Sum P(2) = 7.9e-57
Identities = 85/371 (22%), Positives = 173/371 (46%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLYKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+ F ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + +EC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHSECHSIIRHERKNDMANMYVLLRAVSS 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+++L+ HI + GL A++++ TQ+ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIEELQRHIHDEGLR---ATSNL-TQEHMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYK 374
F++A DK K
Sbjct: 363 HFMSALDKLAK 373
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 155/608 (25%), Positives = 299/608 (49%)
Query: 8 QTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNF 67
QTFED + L L ++ +S+ + ++ ++ C ++D +
Sbjct: 16 QTFED-------LFLNL--KKGLSRKRYMEIYTKIYNYC--SSANEKALIDFYIPKVKVL 64
Query: 68 IRHAQQRVLAHEE---DQALLKAYIQEWSKFLAQCSYLP---TPFRQLETSLVNKSVSTS 121
+ +++ E + ALL + +W+++ + L +P ++ +S +K ++S
Sbjct: 65 VAQKAVEIMSRSESYPNDALLLFFRNQWNEWKMSSNVLKNLLSPVNKIHSS--DKKTTSS 122
Query: 122 LTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVI 181
N N ES V L+SW ++ FN +K +L S +++++++R G + + Q++
Sbjct: 123 SANQN--------ESVVYSDTLNSWRETAFNPLKNKLSVSLLQIIKNDRTGFSTNLQVLS 174
Query: 182 GVRESYVNLCSNPE-DKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
E YV L PE +KL+IY+ FE+ ++ TE+FY ++A+F++ NGV YM++ +
Sbjct: 175 DSLECYVQL--GPEKNKLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNR 232
Query: 241 LHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXX 300
+ +E R +Y+ S+ ++ LT VL+S++K ++ ++
Sbjct: 233 IEQETNRVNQYMPIST-LEKLTKILNNVLISNYKEQFASKFLDILIEDKSSDLVMMYSLL 291
Query: 301 DRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFK 360
R+ +TP+ I + GL ++ ++ + + + LL+++++F+ ++K+ +
Sbjct: 292 SRVNH-LTPLKNIFSDFIKSEGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYG 350
Query: 361 DDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPL 420
+D F TA DK++ +VN+ + P K+ ES P +L+ +CD +LRK P
Sbjct: 351 NDTDFTTAMDKSFSILVNENPA-SYD-PKKK--------ESNIPVVLSKFCDQILRKGPH 400
Query: 421 SKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLR 480
A E+E KL + + KY+ +KD+FM ++ L++RL+ D SA + E M+ L+
Sbjct: 401 HISDEA-ELEKKLTEAVCLFKYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLK 459
Query: 481 DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSER 540
+ DY KL RM D+++ +D+N F+ ++ N +L G+W +++
Sbjct: 460 NY-QGFDYCTKLTRMITDMRLCKDININFQNHLNEKSLTLPYQFNFYVLTNGSWTLTNKQ 518
Query: 541 VTVSL--PLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGK-YDLDVTTFQ 597
P E+ I E FYKK + GR L + + S + GK Y L T +Q
Sbjct: 519 TATPFKPPSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQ 578
Query: 598 MAVLFAWN 605
MA+L +N
Sbjct: 579 MAILLMFN 586
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 534 (193.0 bits), Expect = 3.0e-51, P = 3.0e-51
Identities = 146/487 (29%), Positives = 240/487 (49%)
Query: 55 KIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLV 114
++ + LK + N ++ + + D+++LK Y Q+W + L L V
Sbjct: 91 RLKEFLKNYLTNLLKDGEDLM-----DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 115 NKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEA 174
+ + ++ I S L L +W +F + +++Q+ + + ++
Sbjct: 146 RREC------DEGRKGIYEIYS----LALVTWRDCLFRPLNKQVQNKCLLKKKKKKKAMR 195
Query: 175 FDSQLVIGVRESYV-NLCSNPEDK------LQIYREHFEKAYIAATESFYTVKAAEFLQN 227
SQL+ + +V L N +D L +Y+E FE ++A TE FYT ++ EFLQ
Sbjct: 196 MLSQLITFILLVFVVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQ 255
Query: 228 NGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXX 287
N V YMK A+A+L EE+ R YL S+ +L C VL+ E ++
Sbjct: 256 NPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC-EQVLIEKHLEIFHTEFQNLLDA 314
Query: 288 XXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLEL 347
RI+DG+ + + LE HI N GLA + + D + YV+ +L++
Sbjct: 315 DKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDV 374
Query: 348 FNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELL 407
+++ LV AF +D F+ A DKA +N+ V K+ + SK PELL
Sbjct: 375 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS-----------SKSPELL 423
Query: 408 ANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSA 467
A YCD LL+K+ SK E+E L V++V KY+++KDVF +F+ L +RL+ SA
Sbjct: 424 ARYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA 481
Query: 468 DSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIK 527
+ E +M+ L+ +Y +KL RMFQDI VS+DLN QFK+ S+ + +I+
Sbjct: 482 SDDAEASMISKLKQA-CGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQ 539
Query: 528 ILNAGAW 534
+L++G+W
Sbjct: 540 VLSSGSW 546
Score = 507 (183.5 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 141/485 (29%), Positives = 229/485 (47%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYV-NLCSNPEDKLQ 199
L L +W +F + +++Q+ + + ++ SQL+ + +V L N +D
Sbjct: 162 LALVTWRDCLFRPLNKQVQNKCLLKKKKKKKAMRMLSQLITFILLVFVVELGLNEDDAFA 221
Query: 200 IYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQ 259
+ Y + ES + F E +++ + ++ A + LE VQ
Sbjct: 222 --KGPTLTVYKESFESQFLADTERFYTRESTE-FLQQNPVTEYMKKAEA-RLLEEQRRVQ 277
Query: 260 L---------LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPM 310
+ L C VL+ E ++ RI+DG+ +
Sbjct: 278 VYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGEL 337
Query: 311 LQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARD 370
+ LE HI N GLA + + D + YV+ +L++ +++ LV AF +D F+ A D
Sbjct: 338 KKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALD 397
Query: 371 KAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIE 430
KA +N+ V K+ + SK PELLA YCD LL+K+ SK E+E
Sbjct: 398 KACGRFINNNAVTKMAQSS-----------SKSPELLARYCDSLLKKS--SKNPEEAELE 444
Query: 431 SKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVN 490
L V++V KY+++KDVF +F+ L +RL+ SA + E +M+ L+ +Y +
Sbjct: 445 DTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQA-CGFEYTS 503
Query: 491 KLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELE 550
KL RMFQDI VS+DLN QFK+ S+ + +I++L++G+W + T +LP ELE
Sbjct: 504 KLQRMFQDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF-QQSCTFALPSELE 561
Query: 551 DYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLD 610
FY +HSGRKL W + +S G + + +Y L +TFQMA+L +N
Sbjct: 562 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 621
Query: 611 RFQNL 615
Q L
Sbjct: 622 TVQQL 626
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 517 (187.1 bits), Expect = 2.4e-49, P = 2.4e-49
Identities = 167/625 (26%), Positives = 284/625 (45%)
Query: 14 WPSMRPIVLKLLQQ--EPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHA 71
W ++ V ++ ++ E ++ ++ L+ A+H C + + VD + N + A
Sbjct: 24 WDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCA--DASKTITVDNFNDQTANVLGEA 81
Query: 72 --QQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETS--LVNKSVSTSLTNNNN 127
VL EE A L+ + Q + + + TS +N L
Sbjct: 82 LYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGY-LNRYWV 140
Query: 128 KQKISAEESTVR---VLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVR 184
K K E+ V L L SW+ +F+ I+ L + + + +R E D + V
Sbjct: 141 KLKNRFTETLVYDIYTLCLVSWHHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCV 200
Query: 185 ESYVNLCSNPED----KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAK 240
+S +L + D L Y+ FE +I T++FY +++E+L ++ + Y+K A+ +
Sbjct: 201 DSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIR 260
Query: 241 LHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXX 300
L EEE YL S+ LL + VL++ + + + +M+
Sbjct: 261 LAEEEELVRLYLHESTLKPLL-EATEDVLIAQHEEVLHNDFARMLDQNCSEDIIRMYRLM 319
Query: 301 DRIKDGITPMLQDLEAHIVNAGLADMIASADIITQ-------DSEKYVERLLELFNQFSK 353
R +G+ P+ Q E + +G A A A I+ Q D ++Y+E LL + +
Sbjct: 320 SRTPNGLQPLRQTFEEFVKRSGFA---AVAKIVPQVGGEADVDPKEYMEMLLSTYKASKE 376
Query: 354 LVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDM 413
LV AF D F + D A++ +VN V C S+ PELLA Y D
Sbjct: 377 LVNTAFHGDTDFTKSLDTAFRELVNRNVV---------CQR----SSSRSPELLAKYADS 423
Query: 414 LLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEE 473
+LRK+ +K + D++E L +++++ +YV++KDVF F+ L +RL+ TS + E
Sbjct: 424 ILRKS--NKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAES 481
Query: 474 NMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGA 533
+M+ L++V +Y +KL RMFQDI +SQ++ F Q + G+I + +L
Sbjct: 482 SMLSKLKEV-CGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAGNI--DFSALVLGTSF 538
Query: 534 WARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTIT--FSNEVG-KYD 590
W V LP EL +++Y H+GRKL W H+S G I + + Y
Sbjct: 539 WPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYV 598
Query: 591 LDVTTFQMAVLFAWNERPLDRFQNL 615
V+T+QM VL +N R ++ L
Sbjct: 599 FQVSTYQMGVLLLYNHRDSYTYEEL 623
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 454 (164.9 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 159/644 (24%), Positives = 288/644 (44%)
Query: 2 LKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPS-KIVDAL 60
LK K + F+ W +RP ++ ++ P++ +W + F V+ +C+ S ++ + +
Sbjct: 80 LKPKVVE-FDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEV 138
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
K I +R +Q ++ + D LL+ Y + W F ++ F L V + T
Sbjct: 139 KACIQEHVRQKRQDIVDVDPD-LLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFVKQKRCT 197
Query: 121 SLTNNNNKQKISA--EESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE-AFDS 177
L N + + L L+ W + + I +L + + ++R G +
Sbjct: 198 DLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIAIDNDRKGNFPHIA 257
Query: 178 QLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYA 237
V GV S+V + D + + KA +T +FY + L + + Y A
Sbjct: 258 NEVSGVINSFVKMEETDFDVVPAEGARY-KAR-ESTTAFYQESFEKPLLTDTEQYYSALA 315
Query: 238 DAKLH---------------EEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECP 282
L E+E K SSV+ + C V++ + K+ + A C
Sbjct: 316 QKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCH 375
Query: 283 KMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDS--EKY 340
+I I+ G++ M+++ E ++ GL + +T ++ +++
Sbjct: 376 DLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKKGLE----AVSRLTGENVPQQF 431
Query: 341 VERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPE 400
VE +L ++N+F+ + F DD F + DKA + VVN +K+ G +++P
Sbjct: 432 VENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVN----------SKE-PG-QSVP- 478
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
K E LA Y D LL+K+ +K L+ ++E+KL + +++ +Y+++KD+F +F+ L R
Sbjct: 479 -KASERLARYTDGLLKKS--TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANR 535
Query: 461 LILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI 520
LI TS + EE M+ L+ ++ +KL+RMF DI +SQ+L+ F + K
Sbjct: 536 LIASTSISMDAEELMINKLKQA-CGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQ 594
Query: 521 GD----SINIKILNAGAWARGSERVTVS-------------LPLELEDYIPEVEDFYKKK 563
D IL AG+W + +++ + LP L+ I E E FY K
Sbjct: 595 PDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGK 654
Query: 564 HSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNER 607
H+GRKL W +MS G + + +Y + +QMA L + R
Sbjct: 655 HNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERR 698
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 454 (164.9 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 159/644 (24%), Positives = 288/644 (44%)
Query: 2 LKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPS-KIVDAL 60
LK K + F+ W +RP ++ ++ P++ +W + F V+ +C+ S ++ + +
Sbjct: 80 LKPKVVE-FDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEV 138
Query: 61 KEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVST 120
K I +R +Q ++ + D LL+ Y + W F ++ F L V + T
Sbjct: 139 KACIQEHVRQKRQDIVDVDPD-LLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFVKQKRCT 197
Query: 121 SLTNNNNKQKISA--EESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE-AFDS 177
L N + + L L+ W + + I +L + + ++R G +
Sbjct: 198 DLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIAIDNDRKGNFPHIA 257
Query: 178 QLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYA 237
V GV S+V + D + + KA +T +FY + L + + Y A
Sbjct: 258 NEVSGVINSFVKMEETDFDVVPAEGARY-KAR-ESTTAFYQESFEKPLLTDTEQYYSALA 315
Query: 238 DAKLH---------------EEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECP 282
L E+E K SSV+ + C V++ + K+ + A C
Sbjct: 316 QKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCH 375
Query: 283 KMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDS--EKY 340
+I I+ G++ M+++ E ++ GL + +T ++ +++
Sbjct: 376 DLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKKGLE----AVSRLTGENVPQQF 431
Query: 341 VERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPE 400
VE +L ++N+F+ + F DD F + DKA + VVN +K+ G +++P
Sbjct: 432 VENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVN----------SKE-PG-QSVP- 478
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
K E LA Y D LL+K+ +K L+ ++E+KL + +++ +Y+++KD+F +F+ L R
Sbjct: 479 -KASERLARYTDGLLKKS--TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANR 535
Query: 461 LILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI 520
LI TS + EE M+ L+ ++ +KL+RMF DI +SQ+L+ F + K
Sbjct: 536 LIASTSISMDAEELMINKLKQA-CGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQ 594
Query: 521 GD----SINIKILNAGAWARGSERVTVS-------------LPLELEDYIPEVEDFYKKK 563
D IL AG+W + +++ + LP L+ I E E FY K
Sbjct: 595 PDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGK 654
Query: 564 HSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNER 607
H+GRKL W +MS G + + +Y + +QMA L + R
Sbjct: 655 HNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERR 698
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 400 (145.9 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 101/280 (36%), Positives = 151/280 (53%)
Query: 339 KYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTL 398
++VE +LE+ ++F +L+ D F++A DKA +VVN ++ E P C
Sbjct: 366 QFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKSIC------ 413
Query: 399 PESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLT 458
K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF +F+ L
Sbjct: 414 ---KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLA 468
Query: 459 RRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKG 518
+RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F +
Sbjct: 469 KRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDT 527
Query: 519 SI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHM 575
I G S I +L AGAW + T ++P ELE + E FY + SGRKL W H++
Sbjct: 528 IIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYL 587
Query: 576 SNGTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
G + + Y VTT+QMAVL A+N ++ L
Sbjct: 588 CTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKEL 627
Score = 233 (87.1 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 83/352 (23%), Positives = 160/352 (45%)
Query: 166 VQSERNGEAFDSQLVIGVRESYVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEF 224
++ +R GE + +++ GV S+V++ + L+ Y+E FE ++ T +Y +A+
Sbjct: 195 LEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNL 254
Query: 225 LQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKM 284
LQ + YM+ +L +EE+R KYL SS +++ +C +V+ + AEC +
Sbjct: 255 LQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQR-MVADHLQFLHAECHNI 313
Query: 285 IXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSE-KYVER 343
I + G+ M+Q+L+ HI + GL A++++ ++ ++VE
Sbjct: 314 IRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLR---ATSNLSQENMPTQFVES 370
Query: 344 LLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLP 399
+LE+ ++F +L+ D F++A DKA +VVN ++ K EL K C + L
Sbjct: 371 VLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNL--LK 428
Query: 400 ESKCPELLANYC-DMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLT 458
+S + N D L + K + ++ K +L + + + M +A +
Sbjct: 429 KS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 487
Query: 459 RRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+ L + E + D+ + AD NK ++ DL F+
Sbjct: 488 K---LKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQ 536
Score = 104 (41.7 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 30/150 (20%), Positives = 63/150 (42%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIM-NF 67
F++ W + + ++ + V + W + F ++ +C+ + E P + + I N
Sbjct: 10 FDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPE--PVRREPYTETKIFENH 67
Query: 68 IRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNN 127
+ H +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 68 VHHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYG 125
Query: 128 KQKISAEESTVRV--LMLDSWNQSIFNDIK 155
+ E + + L LD W + + ++
Sbjct: 126 YGGVDMNEPLMEIGELALDMWRKLMIEPLQ 155
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 384 (140.2 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 118/472 (25%), Positives = 220/472 (46%)
Query: 143 LDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 202
L + ++N++ +++ + + LV ER GE D L+ V + YV + +++ Y
Sbjct: 133 LTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMG---QMERYE 189
Query: 203 EHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLT 262
E FE + T S+Y+ KA+ ++Q + YM ++ L +E R YL SSS +L+
Sbjct: 190 EDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVE 249
Query: 263 DCCVTVLVSSFKNTILAE----CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHI 318
+LV F + +L + C ++ +I G+ P+ + H+
Sbjct: 250 KVQHELLVV-FASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHV 308
Query: 319 VNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G A + + D T V + Q L++ + +++ + ++N
Sbjct: 309 TAEGNALVQQAEDTATNQ----VANTASVQEQV--LIRKVIELHDKYMVYVTECFQN--- 359
Query: 379 DTTVFKLELPTKQCTGI---KTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRN 435
T+F L K+ I KT+ S ELLA +CD +L+K S++L+ + IE L
Sbjct: 360 -HTLFHKAL--KEAFEIFCNKTVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEK 415
Query: 436 VLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARM 495
V+ +L Y+ +KD+F F++ L RRL+ D SA+ + E +++ L+ + +K+ M
Sbjct: 416 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGM 474
Query: 496 FQDIKVSQDLNYQFKQSYRGSKGSI--GDSINIKILNAGAWARGSERVTVSLPLELEDYI 553
D+ ++++ F + Y GS + G + + +L G W + ++LP E+ +
Sbjct: 475 VTDLTLARENQNSF-EDYLGSNPAANPGIDLTVTVLTTGFWP-SYKSFDINLPSEMIKCV 532
Query: 554 PEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWN 605
+ FY+ K RKL W + + I + +L V+T+Q AVL +N
Sbjct: 533 EVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFN 584
Score = 91 (37.1 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 40/197 (20%), Positives = 79/197 (40%)
Query: 4 DKGTQTFEDKWPSMRPIVLKLLQ-----QEPVSQNE-WQNLFYAVHVVCLWDEKGP---- 53
++ T E W M+ + KL + EP +E + L+ ++ +C +K P
Sbjct: 2 ERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCT--QKPPHDYS 59
Query: 54 SKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSL 113
++ D +E +I L + D+ +L+ + WS +L F L+
Sbjct: 60 QQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYF 119
Query: 114 VNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE 173
+ + SL N + L + ++N++ +++ + + LV ER GE
Sbjct: 120 IARR---SLPPLNE-------------VGLTCFRDLVYNELHSKVKQAVIALVDKEREGE 163
Query: 174 AFDSQLVIGVRESYVNL 190
D L+ V + YV +
Sbjct: 164 QIDRALLKNVLDIYVEI 180
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 289 (106.8 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 69/207 (33%), Positives = 113/207 (54%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
+K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F+K L +R
Sbjct: 388 NKPAELIAKYVDSKLRAG--NKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKR 445
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ +
Sbjct: 446 LLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQYMQNQTEP 503
Query: 520 IGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGT 579
+ + IL G W + + V LP E+ + FY KHSGRKLQW + +
Sbjct: 504 SNIELTVNILTMGYWPSYTP-MDVHLPAEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAV 562
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ + GK +L V+ FQ VL +NE
Sbjct: 563 LKTEFKEGKKELQVSLFQTLVLLMFNE 589
Score = 192 (72.6 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 59/251 (23%), Positives = 114/251 (45%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ R ++ V+ ER+GE D L+ S + + S+ LQ+
Sbjct: 160 LELFRTHIVSDAAVQSRTVQGILEQVERERSGETVDRSLL----RSLLGMLSD----LQV 211
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ +++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 212 YKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPL 271
Query: 261 LTDCCVTVLVSSFKNTILAECPK-MIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ L+ TIL + + ++ ++K G+T +LQ +I
Sbjct: 272 IATV-EKQLLGEHMTTILQKGLRTLLDENRVCELTLLYELFSKVKGGLTALLQSWREYIK 330
Query: 320 NAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVND 379
+ G A+ + S + +D E V+ LL+ +Q + + F+ + F+ A +A++N +N
Sbjct: 331 SVG-AETVCSPE---RDREM-VQELLDFKDQMDSVTQSCFQRNESFINAMKEAFENFINQ 385
Query: 380 TTVFKLELPTK 390
EL K
Sbjct: 386 RPNKPAELIAK 396
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 406 (148.0 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 106/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 95 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 148
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF
Sbjct: 149 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQ 197
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 198 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 256
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 257 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 316
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 317 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 364
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 67/278 (24%), Positives = 121/278 (43%)
Query: 240 KLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXX 299
+L +EE+R KYL SS +++ +C +V+ + AEC +I
Sbjct: 7 RLKDEEIRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHAECHNIIRQEKKNDMANMYVL 65
Query: 300 XDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKD 357
+ G+ M+Q+L+ HI + GL A++++ TQ++ +VE +LE+ +F +L+
Sbjct: 66 LRAVSTGLPHMIQELQNHIHDEGLR---ATSNL-TQENMPTLFVESVLEVHGKFVQLINT 121
Query: 358 AFKDDPRFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-D 412
D F++A DKA +VVN +V K EL K C + L +S + N D
Sbjct: 122 VLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVED 178
Query: 413 MLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKE 472
L + K + ++ K +L + + + M +A + + L + E
Sbjct: 179 KLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFT 235
Query: 473 ENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+ D+ + AD NK ++ DL F+
Sbjct: 236 SKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQ 273
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 260 (96.6 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 77/257 (29%), Positives = 131/257 (50%)
Query: 356 KDAFKDDPRFLTARDKAYKNVVN-----DTTVFKLELPTKQCTGIKTLPESKCPELLANY 410
KD + R L RDK Y ++N D T F+ L + I ++ PE ++ +
Sbjct: 327 KDPVEFVQRLLDERDK-YDKIINTAFGNDKT-FQNALNSSFEYFINL--NARSPEFISLF 382
Query: 411 CDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSE 470
D LRK K +T ++E L V+++ +Y+Q KDVF +++K HL +RL+ + +
Sbjct: 383 VDDKLRKG--LKGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDD 440
Query: 471 KEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKIL 529
E +++ L+ + G + +KL MF D+K S+D F S+ + S G ++ +++L
Sbjct: 441 AERSLIVKLKTECGY--QFTSKLEGMFTDMKTSEDTMRGFYGSH--PELSEGPTLIVQVL 496
Query: 530 NAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVG-K 588
G+W V +LP E+ + +Y H+GR+L W +M I G K
Sbjct: 497 TTGSWPT-QPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQK 555
Query: 589 YDLDVTTFQMAVLFAWN 605
++L+V+TFQM VL +N
Sbjct: 556 HELNVSTFQMCVLMLFN 572
Score = 223 (83.6 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 79/353 (22%), Positives = 166/353 (47%)
Query: 35 WQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSK 94
WQ L A+H + D G S + L + N + H L + A + ++++E SK
Sbjct: 29 WQILERAIHQIYNQDASGLS--FEELYRNAYNMVLHKFGEKL-YTGFIATMTSHLKEKSK 85
Query: 95 FL--AQC-SYLPTPFRQL-ETSLVNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSI 150
+ AQ S+L ++ E + + + L + S +++ V + L+ W ++
Sbjct: 86 LIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTHVHPMGLNLWRDNV 145
Query: 151 --FNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKA 208
F I RL ++ + LVQ ER GE D L+ V + +++L + +Y+E FEK
Sbjct: 146 VHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGES------VYQEDFEKP 199
Query: 209 YIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTV 268
++ A+ FY V++ EF+++ Y+K ++ +L EE R YL++ S ++ + +
Sbjct: 200 FLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEM 259
Query: 269 LVSSFKNTILAE---CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLAD 325
+ + + + E M+ R+ +G+ + + +H+ G
Sbjct: 260 IANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREMG-KQ 318
Query: 326 MIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
++ + ++D ++V+RLL+ +++ K++ AF +D F A + +++ +N
Sbjct: 319 LVTDPEK-SKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFIN 370
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 263 (97.6 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 402 KCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRL 461
K PE ++ + D L+K K ++ +E++ L +L++ + +Q KDVF +++K HL +RL
Sbjct: 378 KSPEYISLFIDEKLKKG--LKGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRL 435
Query: 462 ILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSI 520
+L S + E NM+ L+ + G + +KL MF D+++SQD FK + K ++
Sbjct: 436 LLGRSISDDAERNMIAKLKTECGY--QFTSKLEGMFTDMRLSQDTMSGFKTYIQNLKKAL 493
Query: 521 GDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTI 580
+N+ +L G W +LP E+ + +Y H+GR L W +M I
Sbjct: 494 PIDLNVHVLTTGFWPT-QNTANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEI 552
Query: 581 TFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+ ++L V+++QM +L +N++ F+ +
Sbjct: 553 KANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEI 587
Score = 215 (80.7 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 67/271 (24%), Positives = 126/271 (46%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
IK RL ++ + +VQ ER GE D L+ + + ++L N ++ +Y E FEK + T
Sbjct: 152 IKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKN---VYIEDFEKPLLLKT 208
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
S Y ++ +Q YMK + L EE R YL+SSS +L + C L+S+
Sbjct: 209 SSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKL-KEVCEKQLISNH 267
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
T++ + M+ R+ DG+ M + +++ G I
Sbjct: 268 MRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYVKEIGRG--IVM 325
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN----DTTVFKL 385
+ T++S Y + LL+L +++ L+++A +D +F+ + +A++ +N L
Sbjct: 326 DEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFINLNPKSPEYISL 385
Query: 386 ELPTKQCTGIKTLPESKCPELLANYCDMLLR 416
+ K G+K + E + +++ + ML R
Sbjct: 386 FIDEKLKKGLKGVSEEEV-DIILDKILMLFR 415
>UNIPROTKB|H0YCA0 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HGNC:HGNC:2556
EMBL:AP002433 EMBL:AP003307 Ensembl:ENST00000532782 Uniprot:H0YCA0
Length = 130
Score = 390 (142.3 bits), Expect = 7.4e-36, P = 7.4e-36
Identities = 73/98 (74%), Positives = 87/98 (88%)
Query: 139 RVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKL 198
+ LMLD+WN+SIF++IK RLQDSAMKLV +ER GEAFDSQLVIGVRESYVNLCSNPEDKL
Sbjct: 33 QALMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKL 92
Query: 199 QIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKY 236
QIYR++FEKAY+ +TE FY +A +LQ NGV++YMKY
Sbjct: 93 QIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKY 130
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/127 (32%), Positives = 61/127 (48%)
Query: 42 VHVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVLA--HEEDQALLKAYIQEWSKFLAQC 99
VH VCLWD+KGP+KI ALKEDI+ FI+ AQ +L +E + +K +Q+ + L
Sbjct: 3 VHAVCLWDDKGPAKIHQALKEDILEFIKQAQALMLDTWNESIFSNIKNRLQDSAMKLVHA 62
Query: 100 SYLPTPFRQLETSLVNKSVSTSLTN--NNNKQKISAEESTVRVLMLDSWNQSIFNDIKQR 157
L F ++ LV V S N +N + K+ LDS +
Sbjct: 63 ERLGEAF---DSQLVI-GVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSY 118
Query: 158 LQDSAMK 164
LQ + ++
Sbjct: 119 LQQNGVQ 125
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 408 (148.7 bits), Expect = 9.0e-36, P = 9.0e-36
Identities = 105/280 (37%), Positives = 152/280 (54%)
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
+VE +LE+ +F +L+ D F++A DKA +VVN ++ E P C
Sbjct: 339 FVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKSVC------- 385
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF +F+ L +
Sbjct: 386 --KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F R
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTV 500
Query: 520 I--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMS 576
I G S I +L AGAW + T ++P ELE + E FY + SGRKL W H++
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 577 NGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 561 TGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 340 (124.7 bits), Expect = 7.0e-28, P = 7.0e-28
Identities = 114/512 (22%), Positives = 225/512 (43%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLYKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+ F ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + +EC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHSECHSIIRHERKNDMANMYVLLRAVSS 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+++L+ HI + GL A++++ TQ+ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIEELQRHIHDEGLR---ATSNL-TQEHMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDKLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIRNQDTVIDLGISFQ 508
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 408 (148.7 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 105/280 (37%), Positives = 152/280 (54%)
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
+VE +LE+ +F +L+ D F++A DKA +VVN ++ E P C
Sbjct: 339 FVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKSVC------- 385
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF +F+ L +
Sbjct: 386 --KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F R
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTV 500
Query: 520 I--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMS 576
I G S I +L AGAW + T ++P ELE + E FY + SGRKL W H++
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 577 NGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 561 TGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 335 (123.0 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 113/512 (22%), Positives = 225/512 (43%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + + +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAETKIFLESHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLYKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKLTEADIQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+ F ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + +EC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHSECHSIIQQERKNDMANMYVLLRAVSS 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+++L+ HI + GL A++++ TQ+ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIEELQKHIHDEGLR---ATSNL-TQEHMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDKLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIRNQDTVIDLGISFQ 508
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 310 (114.2 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 84/270 (31%), Positives = 146/270 (54%)
Query: 353 KLVKDAFKDDPRFLTARD-KAYKNVVNDTTVFKLEL---PTKQC-TGIKTLPESKCPELL 407
K+V D KD + D KA +++ + + +K E K + L +++ EL+
Sbjct: 382 KIVMDEEKDKDMVQSLLDFKASLDIIWEESFYKNESFGNTIKDSFEHLINLRQNRPAELI 441
Query: 408 ANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSA 467
A + D LR +K + +E+ES L VL++ +++Q KDVF F+K L +RL+L SA
Sbjct: 442 AKFLDEKLRAG--NKGTSEEELESVLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSA 499
Query: 468 DSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRG-SKGSIGDSIN 525
+ E++M+ L+ + G + + NKL MF+DI++S+++N FKQS + +K G ++
Sbjct: 500 SIDAEKSMISKLKTECG--SQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMS 557
Query: 526 IKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNE 585
+ +L G W + V LP EL Y ++FY K+SGR+L W + + + +
Sbjct: 558 VHVLTTGYWPTYPP-MDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFS 616
Query: 586 VGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
GK +L V+ FQ VL +N+ F+++
Sbjct: 617 KGKKELAVSLFQAVVLMLFNDAMKLSFEDI 646
Score = 152 (58.6 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 55/258 (21%), Positives = 114/258 (44%)
Query: 18 RPIVLKLLQQEPV-----SQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHAQ 72
+ V+KL + +P +N W+ L A+ + L +K S +++L + + N H
Sbjct: 74 KKFVIKLNKAKPTLPTNFEENTWEKLQSAIRAIFL--KKKISFDLESLYQAVDNLCLHKL 131
Query: 73 QRVL-------AHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQL-ETSLVNKSVSTSLTN 124
L E A L++ + + + S + ++ + L+ +S++ +L
Sbjct: 132 DGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQDFCDQMLMIRSIALTLDR 191
Query: 125 NNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVR 184
Q + L L + S+ +++QR + +++ ER EA + L+ +
Sbjct: 192 KYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHLL 251
Query: 185 ESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEE 244
+ + L IY E FEK ++ T FY + +++Q + V Y+K+ + +LHEE
Sbjct: 252 KMFT--------ALGIYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEE 303
Query: 245 ELRACKYLESSSSVQLLT 262
R Y+++ + L+T
Sbjct: 304 NERCILYIDAVTRKPLIT 321
Score = 41 (19.5 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 6/34 (17%), Positives = 24/34 (70%)
Query: 57 VDALKEDIMNFIRHAQQRVLAHEE-DQALLKAYI 89
+++L++ + +++R Q+++ EE D+ ++++ +
Sbjct: 365 LESLRQALSSYVRKTGQKIVMDEEKDKDMVQSLL 398
Score = 39 (18.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 11/49 (22%), Positives = 27/49 (55%)
Query: 43 HVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQE 91
H++ + EKG + ++D + + + ++ RV A E + L +Y+++
Sbjct: 331 HILVVL-EKGFTTLMDGRRTEDLQRMQTLFSRVNALESLRQALSSYVRK 378
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 406 (148.0 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 106/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 330 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 383
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF
Sbjct: 384 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 491
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 492 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 551
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 552 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 363 (132.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 118/512 (23%), Positives = 228/512 (44%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWSKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + AEC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVST 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+Q+L+ HI + GL A++++ TQ++ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIQELQNHIHDEGLR---ATSNL-TQENMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDKLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIKNQDTVIDLGISFQ 508
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 406 (148.0 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 106/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 330 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 383
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF
Sbjct: 384 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQ 432
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 491
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 492 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 551
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 552 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 363 (132.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 118/512 (23%), Positives = 228/512 (44%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQTILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + AEC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVST 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+Q+L+ HI + GL A++++ TQ++ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIQELQNHIQDEGLR---ATSNL-TQENMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDKLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIKNQDTVIDLGISFQ 508
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 403 (146.9 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 105/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 273 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 326
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E +L + + V KY+ +KDVF
Sbjct: 327 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDRLTSFITVFKYIDDKDVFQ 375
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 376 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 434
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 435 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 494
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 495 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 542
Score = 292 (107.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 100/432 (23%), Positives = 191/432 (44%)
Query: 89 IQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNKQKISAEESTVRV--LMLDSW 146
I+ W ++ Y+ +R L T + K+ T + E + + L LD W
Sbjct: 31 IRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGYGGVDMNEPLMEIGELALDMW 90
Query: 147 NQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPED-KLQIYREHF 205
+ + ++ L ++ ++++R GE + +++ GV S+V++ + L+ Y+E F
Sbjct: 91 RKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIF 150
Query: 206 EKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCC 265
E ++ T +Y +A+ LQ + YM+ +L +EE+R KYL SS +++ +C
Sbjct: 151 ESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQ 210
Query: 266 VTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLAD 325
+V+ + AEC +I + G+ M+Q+L+ HI + GL
Sbjct: 211 QR-MVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLR- 268
Query: 326 MIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN---DT 380
A++++ TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN
Sbjct: 269 --ATSNL-TQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPK 325
Query: 381 TVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKTPLSKRLTADEIESKLRNVLL 438
+V K EL K C + L +S + N D L + K + ++ K +L
Sbjct: 326 SVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARML 382
Query: 439 VLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQD 498
+ + + M +A + + L + E + D+ + AD NK ++
Sbjct: 383 AKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKN 439
Query: 499 IKVSQDLNYQFK 510
DL F+
Sbjct: 440 QDTVIDLGISFQ 451
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 403 (146.9 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 105/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 330 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 383
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E +L + + V KY+ +KDVF
Sbjct: 384 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 491
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 492 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 551
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 552 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 362 (132.5 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 118/512 (23%), Positives = 228/512 (44%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + AEC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVST 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+Q+L+ HI + GL A++++ TQ++ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIQELQNHIHDEGLR---ATSNL-TQENMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDRLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIKNQDTVIDLGISFQ 508
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 296 (109.3 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 520 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 576
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 577 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 634
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 635 QYMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 693
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 694 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 729
Score = 165 (63.1 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 52/239 (21%), Positives = 104/239 (43%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 299 LELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 350
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q V Y+ + + +L EE R YL+ S+ L
Sbjct: 351 YQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPL 410
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 411 IATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKA 470
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 471 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFIN 523
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 403 (146.9 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 105/289 (36%), Positives = 157/289 (54%)
Query: 333 ITQDSEK--YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+TQ++ +VE +LE+ +F +L+ D F++A DKA +VVN ++ E P
Sbjct: 330 LTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKS 383
Query: 391 QCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFM 450
C K PELLA YCD LL+K+ +K +T +E+E +L + + V KY+ +KDVF
Sbjct: 384 VC---------KAPELLAKYCDNLLKKS--AKGMTENEVEDRLTSFITVFKYIDDKDVFQ 432
Query: 451 RFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
+F+ L +RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F
Sbjct: 433 KFYARMLAKRLIHGLSMSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSADLNNKFN 491
Query: 511 QSYRGSKGSI--GDSINIKILNAGAWA-RGSERVTVSLPLELEDYIPEVEDFYKKKHSGR 567
+ I G S I +L AGAW + T ++P ELE + E FY + SGR
Sbjct: 492 NFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGR 551
Query: 568 KLQWYHHMSNGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
KL W H++ G + N +GK Y VTT+QMAVL A+N ++ L
Sbjct: 552 KLTWLHYLCTGEVKM-NYLGKPYVAMVTTYQMAVLLAFNNSETVSYKEL 599
Score = 362 (132.5 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 118/512 (23%), Positives = 228/512 (44%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 188 FVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 247
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + AEC +I +
Sbjct: 248 IRCRKYLHPSSYTKVIHECQQR-MVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVST 306
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK--YVERLLELFNQFSKLVKDAFKDDP 363
G+ M+Q+L+ HI + GL A++++ TQ++ +VE +LE+ +F +L+ D
Sbjct: 307 GLPHMIQELQNHIHDEGLR---ATSNL-TQENMPTLFVESVLEVHGKFVQLINTVLNGDQ 362
Query: 364 RFLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKT 418
F++A DKA +VVN +V K EL K C + L +S + N D L
Sbjct: 363 HFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNL--LKKS-AKGMTENEVEDRLTSFI 419
Query: 419 PLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEW 478
+ K + ++ K +L + + + M +A + + L + E +
Sbjct: 420 TVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINK---LKQACGYEFTSKLHRM 476
Query: 479 LRDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + AD NK ++ DL F+
Sbjct: 477 YTDMSVSADLNNKFNNFIKNQDTVIDLGISFQ 508
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 279 (103.3 bits), Expect = 9.8e-35, Sum P(2) = 9.8e-35
Identities = 72/216 (33%), Positives = 118/216 (54%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 378 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELERILDKIMIIFRFIHGKDVFEAF 434
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 435 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDVMVQFKQ 492
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + + V L E+ + FY KHSGRKLQ
Sbjct: 493 -YMQNQSDPGNIDLTVNILTMGYWPTYTP-MEVHLNSEMIKLQEVFKTFYLGKHSGRKLQ 550
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK + V+ FQ VL +NE
Sbjct: 551 WQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNE 586
Score = 177 (67.4 bits), Expect = 9.8e-35, Sum P(2) = 9.8e-35
Identities = 51/240 (21%), Positives = 108/240 (45%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + + +D ++ + D + L++ ER+GEA D L+ S +++ S+ LQ+
Sbjct: 157 LELFRNHVISDKQVQNKTIDGILLLIERERSGEAVDRSLL----RSLLSMLSD----LQV 208
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y+E FE+ ++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 209 YKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPL 268
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R+K G +LQ +I
Sbjct: 269 IA-CVEKQLLGEHLTAILQKGLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIK 327
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
N G + ++ + +K V+ LL+ ++ +++ F+ + +F+ ++++ +N
Sbjct: 328 NFG------TTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFIN 381
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 287 (106.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 607 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 663
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 664 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 721
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 722 -YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 779
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 780 WQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNE 815
Score = 171 (65.3 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 52/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFNDIKQRLQ--DSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D K + + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 386 LELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 437
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 438 YQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 497
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 498 IASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 557
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 558 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFIN 610
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 287 (106.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 537 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 593
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 594 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 651
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 652 -YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 709
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 710 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 745
Score = 169 (64.5 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 316 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 367
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 368 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 427
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 428 IATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 487
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 488 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 540
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 287 (106.1 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 550 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 606
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 607 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 664
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 665 -YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 722
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 723 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 758
Score = 169 (64.5 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 329 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 380
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 381 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 440
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 441 IATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 500
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 501 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 553
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 602 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 658
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 659 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 716
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 717 -YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 774
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 775 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 810
Score = 169 (64.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 381 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 432
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 433 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 492
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 493 IATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 552
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 553 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 605
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 287 (106.1 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 74/216 (34%), Positives = 119/216 (55%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 619 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 675
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 676 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMIQFKQ 733
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G+ + + IL G W + V LP E+ + FY KHSGRKLQ
Sbjct: 734 -YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 791
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK +L V+ FQ VL +NE
Sbjct: 792 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 827
Score = 169 (64.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 398 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 449
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 450 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 509
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 510 IATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 569
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 570 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 622
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 390 (142.3 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 101/280 (36%), Positives = 151/280 (53%)
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
+VE +LE+ ++F +L+ D F++A DKA +VVN ++ E P C
Sbjct: 358 FVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVN----YR-E-PKSIC------- 404
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
K PELLA YCD LL+K+ +K +T +E+E KL + + V KY+ +KDVF + + L +
Sbjct: 405 --KAPELLAKYCDNLLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDVFQKIYARMLAK 460
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKG- 518
RLI S + EE M+ L+ ++ +KL RM+ D+ VS DLN +F + +
Sbjct: 461 RLIHGLSLSMDSEEAMINKLKQA-CGYEFTSKLHRMYTDMSVSTDLNNKFNNFIKTQETV 519
Query: 519 -SIGDSINIKILNAGAWARGS-ERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMS 576
+G S I +L AGAW T ++P ELE + E FY + SGRKL W H++
Sbjct: 520 VDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLHYLC 579
Query: 577 NGTITFSNEVGK-YDLDVTTFQMAVLFAWNERPLDRFQNL 615
G + N + K Y VTT+QMAVL A+N ++ L
Sbjct: 580 TGEVKM-NYLSKPYVAVVTTYQMAVLLAFNNSETVSYKEL 618
Score = 346 (126.9 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 111/511 (21%), Positives = 225/511 (44%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ + V + W + F ++ +C+ + E K+ K + N +
Sbjct: 29 FDETWNKLLTTIRAVVMLDYVERATWNDRFSDIYALCVAYPEPLGEKLYTETKVFLENHV 88
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
R +RVL E ++ +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 89 RQLFKRVL--ESEEKVLVMYHRYWEEYSKGAEYMDCLYRYLNTQFIKKNKLTEADLQYGY 146
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L +K ++++R GE + +++ GV S
Sbjct: 147 GGVDMNEPLMEIGELALDMWRKLMIEPLQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINS 206
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEE 245
+V++ + L+ Y+E FE ++ T +Y +A+ LQ + YM+ +L +EE
Sbjct: 207 FVHVEQYKKKFPLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEE 266
Query: 246 LRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKD 305
+R KYL SS +++ +C +V+ + EC +I +
Sbjct: 267 VRCRKYLHPSSYSKVIHECQQR-MVADHLQFLHGECQNIIRQEKRDDMANMYTLLRAVSS 325
Query: 306 GITPMLQDLEAHIVNAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPR 364
G+ M+Q+L+ HI + G+ A+ ++ ++ +VE +LE+ ++F +L+ D
Sbjct: 326 GLPHMIQELQVHIHDEGIR---ATINLSQENMPTLFVESVLEVHSKFVQLINTVLNGDQH 382
Query: 365 FLTARDKAYKNVVN---DTTVFKL-ELPTKQCTGIKTLPESKCPELLANYC-DMLLRKTP 419
F++A DKA +VVN ++ K EL K C + L +S + N D L
Sbjct: 383 FMSALDKALTSVVNYREPKSICKAPELLAKYCDNL--LKKS-AKGMTENEVEDKLTSFIT 439
Query: 420 LSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWL 479
+ K + ++ K+ +L + + + M +A + + L + E +
Sbjct: 440 VFKYIDDKDVFQKIYARMLAKRLIHGLSLSMDSEEAMINK---LKQACGYEFTSKLHRMY 496
Query: 480 RDVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
D+ + D NK + + DL F+
Sbjct: 497 TDMSVSTDLNNKFNNFIKTQETVVDLGISFQ 527
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 389 (142.0 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 134/572 (23%), Positives = 254/572 (44%)
Query: 54 SKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSL 113
++I L+E + FI++ ++ L +E + L+ Y+++W++F Y+ F +
Sbjct: 77 AEIYKKLEEYLTEFIKNLKR--LPNE---SFLEFYVRKWTRFTIGAVYMNNVFDYMNRYW 131
Query: 114 VNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE 173
V K S + ++ + V L W +F + L + + +Q +R+
Sbjct: 132 VQKERS------DGRKDVY----DVNTLSFIKWKDEMFKPNSKLLIEQILTCIQQQRDNM 181
Query: 174 AFDSQLVIGVRESYVNLCSNPED----KLQIYREHFEKAYIAATESFYTVKAAEFLQNNG 229
D+ L+ +S V L + +D L IY FE ++ AT +Y ++A FL ++
Sbjct: 182 IVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHN 241
Query: 230 VESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXX 289
V YMK + ++ EE R+ YLE + LL + L+ N + + ++
Sbjct: 242 VIDYMKKCETRIGEEVSRSNNYLEERTKKPLL-EVLNAALIEKHANEMYDQFLVLLEQNQ 300
Query: 290 XXXXXXXXXXXDRIKDGITPMLQDLEAHIVN---AGLADMIASADIITQDSEK------- 339
R++ + P+ LE +I A L ++ A+ +++K
Sbjct: 301 IDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAAALEEIQTQAE--NSEAKKKIVEPKV 358
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
YV L+ ++N+F+ +V AF D +F+ + D A ++ VN+ + + P C
Sbjct: 359 YVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPK-PRSPC------- 410
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
+ PELLA Y D L+ + AD N+++V K++ +D F ++ L +
Sbjct: 411 --RTPELLARYADGFLKSNSKDNEMNAD-------NLMIVFKFIAERDSFEEHYRRLLAK 461
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
RL+ TS E EE+++ L++ +Y +K+ +MF DIK S DL +FK +
Sbjct: 462 RLVNGTSKSEEMEESVIHRLQEENS-IEYTSKMTKMFTDIKASDDLKIKFKDGM-----N 515
Query: 520 IGDSINIKILNAGAWARGSERVTVSLPL--ELEDYIPEVEDFYKKKHSGRKLQWYHHMSN 577
+ + +L W S + L L EL+ I + Y ++ G++++W +
Sbjct: 516 VLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGKGKQIEWLWNHGR 575
Query: 578 GTITFSNEVGK----YDLDVTTFQMAVLFAWN 605
+ GK ++ V+ Q+ VL A+N
Sbjct: 576 AELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 389 (142.0 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 134/572 (23%), Positives = 254/572 (44%)
Query: 54 SKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSL 113
++I L+E + FI++ ++ L +E + L+ Y+++W++F Y+ F +
Sbjct: 77 AEIYKKLEEYLTEFIKNLKR--LPNE---SFLEFYVRKWTRFTIGAVYMNNVFDYMNRYW 131
Query: 114 VNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE 173
V K S + ++ + V L W +F + L + + +Q +R+
Sbjct: 132 VQKERS------DGRKDVY----DVNTLSFIKWKDEMFKPNSKLLIEQILTCIQQQRDNM 181
Query: 174 AFDSQLVIGVRESYVNLCSNPED----KLQIYREHFEKAYIAATESFYTVKAAEFLQNNG 229
D+ L+ +S V L + +D L IY FE ++ AT +Y ++A FL ++
Sbjct: 182 IVDTNLISSAIKSLVFLSIDIQDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHN 241
Query: 230 VESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXX 289
V YMK + ++ EE R+ YLE + LL + L+ N + + ++
Sbjct: 242 VIDYMKKCETRIGEEVSRSNNYLEERTKKPLL-EVLNAALIEKHANEMYDQFLVLLEQNQ 300
Query: 290 XXXXXXXXXXXDRIKDGITPMLQDLEAHIVN---AGLADMIASADIITQDSEK------- 339
R++ + P+ LE +I A L ++ A+ +++K
Sbjct: 301 IDHIQRMYKLLARVQKTLDPLANTLELYIKKEAAAALEEIQTQAE--NSEAKKKIVEPKV 358
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLP 399
YV L+ ++N+F+ +V AF D +F+ + D A ++ VN+ + + P C
Sbjct: 359 YVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPK-PRSPC------- 410
Query: 400 ESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTR 459
+ PELLA Y D L+ + AD N+++V K++ +D F ++ L +
Sbjct: 411 --RTPELLARYADGFLKSNSKDNEMNAD-------NLMIVFKFIAERDSFEEHYRRLLAK 461
Query: 460 RLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
RL+ TS E EE+++ L++ +Y +K+ +MF DIK S DL +FK +
Sbjct: 462 RLVNGTSKSEEMEESVIHRLQEENS-IEYTSKMTKMFTDIKASDDLKIKFKDGM-----N 515
Query: 520 IGDSINIKILNAGAWARGSERVTVSLPL--ELEDYIPEVEDFYKKKHSGRKLQWYHHMSN 577
+ + +L W S + L L EL+ I + Y ++ G++++W +
Sbjct: 516 VLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYLQQGKGKQIEWLWNHGR 575
Query: 578 GTITFSNEVGK----YDLDVTTFQMAVLFAWN 605
+ GK ++ V+ Q+ VL A+N
Sbjct: 576 AELKAHLTKGKGGKPFNFIVSQIQLMVLLAYN 607
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 275 (101.9 bits), Expect = 9.1e-33, Sum P(2) = 9.1e-33
Identities = 72/216 (33%), Positives = 117/216 (54%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A + D LR +K T +E+E L V+++ +++ KDVF F
Sbjct: 398 TFINKRP-NKPAELIAKHVDSKLRAG--NKEATDEELERILDKVMIIFRFIHGKDVFEAF 454
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFKQ
Sbjct: 455 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVQFKQ 512
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G + + IL G W + + V L E+ + FY KHSGRKLQ
Sbjct: 513 -YMQNQSDPGSIDLTVNILTMGYWPTYTP-MEVHLTPEMIKLQEVFKTFYLGKHSGRKLQ 570
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK + V+ FQ VL +NE
Sbjct: 571 WQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNE 606
Score = 163 (62.4 bits), Expect = 9.1e-33, Sum P(2) = 9.1e-33
Identities = 52/240 (21%), Positives = 106/240 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQ+
Sbjct: 177 LELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLL----RSLLSMLSD----LQV 228
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 229 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 288
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R+K G +LQ +I
Sbjct: 289 IA-CVEKQLLGEHLTAILHKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEYIK 347
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G + +I + +K V+ LL+ ++ +++ F+ + +F+ ++++ +N
Sbjct: 348 TFG------TTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFETFIN 401
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 273 (101.2 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 69/215 (32%), Positives = 114/215 (53%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A + D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 396 TFINKRP-NKPAELIAKHVDSKLRAG--NKEATDEELERILDKIMILFRFIHGKDVFEAF 452
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ FKQ
Sbjct: 453 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVHFKQ 510
Query: 512 SYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQW 571
+ + + IL G W + + V LP E+ + FY KHSGRKLQW
Sbjct: 511 HMQNQSAPGPIDLTVNILTMGYWPTYTP-MEVHLPPEMVRLQEVFKTFYLGKHSGRKLQW 569
Query: 572 YHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ + + + GK + V+ FQ VL +NE
Sbjct: 570 QTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNE 604
Score = 163 (62.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 53/240 (22%), Positives = 106/240 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L+ ER+GEA D L+ S +++ S+ LQ+
Sbjct: 175 LELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLL----RSLLSMLSD----LQV 226
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q+ V Y+ + +L EE R YL+ S+ L
Sbjct: 227 YKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPL 286
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R+K G +LQ +I
Sbjct: 287 IA-CVEKQLLGEHLTAILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIK 345
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G + +I + +K V+ LL+ ++ +V+ F+ + RF+ ++++ +N
Sbjct: 346 TFG------TTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFIN 399
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 277 (102.6 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 74/218 (33%), Positives = 119/218 (54%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYV-QNKDVFMR 451
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ + KDVF
Sbjct: 521 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYEGKDVFEA 577
Query: 452 FHKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFK 510
F+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ QFK
Sbjct: 578 FYKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVQFK 635
Query: 511 QSYRGSK--GSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRK 568
Q + G+I + + IL G W + V LP E+ + FY KHSGRK
Sbjct: 636 QHMQCQNIPGNI--ELTVNILTMGYWPTYVP-MEVHLPAEMVRLQEIFKTFYLGKHSGRK 692
Query: 569 LQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
LQW + + + + GK +L V+ FQ VL +NE
Sbjct: 693 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 730
Score = 161 (61.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 50/232 (21%), Positives = 102/232 (43%)
Query: 150 IFNDIKQRLQ--DSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEK 207
I +D+K + + D + L++ ER+GEA D L+ S +++ S+ LQIY++ FE+
Sbjct: 307 IISDLKVQSKTIDGILLLIERERSGEAVDRSLL----RSLLSMLSD----LQIYQDSFEQ 358
Query: 208 AYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVT 267
++ T Y + +Q V Y+ + + +L EE R YL+ S+ L+
Sbjct: 359 RFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSLIATVEKQ 418
Query: 268 VLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMI 327
+L + ++ R++ G+ +LQ +I G
Sbjct: 419 LLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFG----- 473
Query: 328 ASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
S +I + +K V+ LL+ ++ ++ F + +F+ +A++ +N
Sbjct: 474 -STIVINPEKDKTMVQELLDFKDKVDHIIDVCFMKNEKFVNGMKEAFETFIN 524
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 270 (100.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 69/215 (32%), Positives = 114/215 (53%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A + D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 396 TFINKRP-NKPAELIAKHVDSKLRAG--NKEATDEELERTLDKIMILFRFIHGKDVFEAF 452
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ FKQ
Sbjct: 453 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVHFKQ 510
Query: 512 SYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQW 571
+ S + + IL G W + + V L E+ + FY KHSGRKLQW
Sbjct: 511 HMQNQSDSGPIDLTVNILTMGYWPTYTP-MEVHLTPEMIKLQEVFKAFYLGKHSGRKLQW 569
Query: 572 YHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ + + + GK + V+ FQ VL +NE
Sbjct: 570 QTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNE 604
Score = 164 (62.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 52/240 (21%), Positives = 106/240 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ER+GEA D L+ S + + S+ LQ+
Sbjct: 175 LELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLL----RSLLGMLSD----LQV 226
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 227 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 286
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R++ G +LQ +I
Sbjct: 287 IA-CVEKQLLGEHLTAILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIK 345
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G +A +I + +K V+ LL+ ++ +++ F+ + RF+ ++++ +N
Sbjct: 346 TFG------TAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFIN 399
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 258 (95.9 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 62/194 (31%), Positives = 101/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+ES L +++ +++Q KDVF R++K HL RR
Sbjct: 381 SRSPEYLSLFIDDKLKKGV--KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARR 438
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + S
Sbjct: 439 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLTSTGVS 496
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 497 LGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGSA 556
Query: 579 TI--TFSNEVGKYD 590
+ TF + K D
Sbjct: 557 DLNATFYGPIKKED 570
Score = 156 (60.0 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 55/262 (20%), Positives = 116/262 (44%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 156 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 212
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 213 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVIHCLDKSTE-EPIVKVVERELISKH 271
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 272 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 329
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 330 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 389
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 390 FIDDKLKKGVKGLTEQEVESIL 411
Score = 62 (26.9 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 580 VTGSN-TRKHILQVSTFQMTILMLFNNREKSTFEEI 614
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 261 (96.9 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 63/194 (32%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+ES L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGAVKKED 571
Score = 154 (59.3 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 55/262 (20%), Positives = 115/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + ++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVESIL 412
Score = 59 (25.8 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 276 (102.2 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 65/217 (29%), Positives = 119/217 (54%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
+K EL+A Y DM LR +K T +E+E L ++++ +++ KDVF F+K L +R
Sbjct: 464 NKPAELIAKYVDMKLRSG--NKGTTDEELEKTLDKIMVLFRFIHGKDVFEAFYKKDLAKR 521
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L++ SA + E++M+ L+ + G + +KL MF+D+++S+D+N F+ +
Sbjct: 522 LLVGKSASVDSEKSMLSKLKQECG--GGFTSKLEGMFKDMELSRDINIAFRGHALSNNRD 579
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+ + + + IL G W + V++P + + FY +KHSGRKLQW + N
Sbjct: 580 VHNLDLCVSILTMGYWPTYAP-TEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLGNC 638
Query: 579 TITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+ + G +L V+ FQ VL +N++P+ ++ +
Sbjct: 639 MLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEI 675
Score = 155 (59.6 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 52/238 (21%), Positives = 102/238 (42%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVN-LCSNPEDKLQIYREHFEKAYIAA 212
+++R D + L++ ER G D G+ +S V LC LQIY FE+ ++ A
Sbjct: 249 VQKRTVDGLLTLIEKERQGSTVDR----GLLKSLVRMLCD-----LQIYTSSFEEKFLDA 299
Query: 213 TESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSS 272
T Y ++ +Q V Y+++ + +L EE R YL+SS+ L+ + +L
Sbjct: 300 TNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPLIYNVEKELLAEH 359
Query: 273 FKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADI 332
+ + ++ R+K+G + + + I G +I D
Sbjct: 360 LTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNFNGFIKKKGRTIVI---D- 415
Query: 333 ITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTK 390
+ + V+ LL+ ++ +V+ F+ + +F + +A++ +N EL K
Sbjct: 416 -PEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFEFFINQRANKPAELIAK 472
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 259 (96.2 bits), Expect = 6.8e-32, Sum P(3) = 6.8e-32
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 360 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 417
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 418 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQSTGVS 475
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 476 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 535
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 536 DLNATFYGPVKKED 549
Score = 155 (59.6 bits), Expect = 6.8e-32, Sum P(3) = 6.8e-32
Identities = 55/262 (20%), Positives = 116/262 (44%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 135 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 191
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 192 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 250
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 251 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 308
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 309 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 368
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 369 FIDDKLKKGVKGLTEQEVETIL 390
Score = 59 (25.8 bits), Expect = 6.8e-32, Sum P(3) = 6.8e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 560 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 594
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 259 (96.2 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 364 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 421
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 422 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 479
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 480 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 539
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 540 DLNATFYGPVKKED 553
Score = 155 (59.6 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 55/262 (20%), Positives = 116/262 (44%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 139 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 195
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 196 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 254
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 255 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 312
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 313 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 372
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 373 FIDDKLKKGVKGLTEQEVETIL 394
Score = 59 (25.8 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 564 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 598
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 260 (96.6 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 63/194 (32%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+ES L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 154 (59.3 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 55/262 (20%), Positives = 115/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + ++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVESIL 412
Score = 59 (25.8 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 260 (96.6 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 63/194 (32%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+ES L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 154 (59.3 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 55/262 (20%), Positives = 115/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + ++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVESIL 412
Score = 59 (25.8 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNRDKYTFEEI 616
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 259 (96.2 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 155 (59.6 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 55/262 (20%), Positives = 116/262 (44%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVETIL 412
Score = 59 (25.8 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 259 (96.2 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 155 (59.6 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 55/262 (20%), Positives = 116/262 (44%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVETIL 412
Score = 59 (25.8 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 259 (96.2 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 154 (59.3 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 55/262 (20%), Positives = 115/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + ++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVETIL 412
Score = 59 (25.8 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 373 (136.4 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 89/233 (38%), Positives = 130/233 (55%)
Query: 375 NVVNDTTVFKLELPTKQCTG-IKTLPESKCP----ELLANYCDMLLRKTPLSKRLTADEI 429
+V + ++F L K C I P + P E +A YCD LL+K SK A EI
Sbjct: 369 DVFENDSLF-LSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKK---SKTCEA-EI 423
Query: 430 ESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYV 489
+ KL N + + KY+++KDV+ +F+ L +RLI + S + EE M+ L+ ++
Sbjct: 424 DQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQA-CGYEFT 482
Query: 490 NKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVT-VSLPLE 548
NKL RMF DI VS DLN +F + S +G ++ IK+L AGAW GS +V ++P E
Sbjct: 483 NKLHRMFTDISVSVDLNNKFNTHLKDSNVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQE 542
Query: 549 LEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVL 601
E I ED+Y K SGRKL W HHM +G + S+ Y + + T+QMA++
Sbjct: 543 FEKSIKMFEDYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAII 595
Score = 270 (100.1 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 119/535 (22%), Positives = 216/535 (40%)
Query: 2 LKDKGTQTFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWD-EKGPSKIVDAL 60
LK K + F D WP +R I ++ V ++ W F V+ +C+ E ++
Sbjct: 3 LKPKIVE-FVDVWPRLRCIAESVITLTKVERSVWNTSFSDVYTLCVAQPEPMADRLYGET 61
Query: 61 KEDIMNFIRHA-QQRVLAHEE------DQALLKAYIQEWSKFLAQCSYLPTPFRQLETSL 113
K + ++ ++VL E LL+ Y W ++ YL + L
Sbjct: 62 KHFLEQHVQEMLAKKVLIEGECSHSNGGPDLLQRYYITWMEYSQGIKYLHQLYIYLNQQH 121
Query: 114 VNKSVSTSLTN-NNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSER-- 170
+ K T + N +AE+ + L LD W + + L ++ + ++R
Sbjct: 122 IKKQKITDTESFYGNLSSDAAEQMEIGELGLDIWRLYMIEYLSSELVRHILEGIAADRAS 181
Query: 171 NG--EAFDSQLVIGVRESYVNLCSNPED-KLQIYREHFEKAYIAATESFYTVKAAEFLQN 227
NG + Q++ GV S+V + + L++Y+E FE + A+ ++YT +A + L
Sbjct: 182 NGTLDHHRVQIINGVIHSFVEVQDYKKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHR 241
Query: 228 NGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXX 287
V YM+ L E RA K+L SS +L +C ++ I +EC +M+
Sbjct: 242 CSVSEYMQEVIRILEYESRRAQKFLHVSSLPKLRKEC-EEKFINDRLGFIYSECREMVSE 300
Query: 288 XXXXXXXXXXXXXDRIKDGI-TPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLE 346
I D + + ++ HI + GL + A + +VE +L+
Sbjct: 301 ERRQDLRNMYVVLKPIPDNLKSELITTFLDHIKSEGLQTVSALKGENIHIA--FVENMLK 358
Query: 347 LFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFK-----LELPTKQCTGIKTLPES 401
+ +++ +L+ D F++D FL+A DKA +V+N + E K C + L +S
Sbjct: 359 VHHKYQELIADVFENDSLFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTL--LKKS 416
Query: 402 KCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRL 461
K E A L + K + ++ K + LL + + + M + + R
Sbjct: 417 KTCE--AEIDQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINR-- 472
Query: 462 ILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGS 516
L + E + D+ + D NK +D V +N K G+
Sbjct: 473 -LKQACGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDSNVDLGINLAIKVLQAGA 526
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 259 (96.2 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 382 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 439
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 440 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 497
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 498 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 557
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 558 DLNATFYGPVKKED 571
Score = 151 (58.2 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 55/262 (20%), Positives = 115/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L E + +Y E FE ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL--GLEGR-SVYEEDFEAPFLEMS 213
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 214 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 272
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + +++ G A + S
Sbjct: 273 MKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVS 330
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + + ++F +D F A D Y +N + L
Sbjct: 331 EEGEGKNPVDYIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 390
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 391 FIDDKLKKGVKGLTEQEVETIL 412
Score = 59 (25.8 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 582 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 616
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 270 (100.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 71/216 (32%), Positives = 116/216 (53%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A + D LR +K T +E+E L V+++ +++ KDVF F
Sbjct: 357 TFINKRP-NKPAELIAKHVDSKLRAG--NKEATDEELERMLDKVMILFRFIHGKDVFEAF 413
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQ 511
+K L +RL++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ FKQ
Sbjct: 414 YKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVHFKQ 471
Query: 512 SYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQ 570
Y ++ G + + IL G W + + V L E+ + FY KHSGRKLQ
Sbjct: 472 -YMQNQSDPGSIDLTVNILTMGYWPTYTP-MEVHLTPEMIKLQEVFKTFYLGKHSGRKLQ 529
Query: 571 WYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
W + + + + GK + V+ FQ VL +NE
Sbjct: 530 WQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNE 565
Score = 152 (58.6 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 50/240 (20%), Positives = 103/240 (42%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ER+GEA D L+ S + + S+ LQ+
Sbjct: 136 LELFRNHIISDKMVQTKTIDGILLLIERERSGEAVDRSLL----RSLLGMLSD----LQV 187
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 188 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYLDHSTQKPL 247
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R++ G +LQ +I
Sbjct: 248 IA-CVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSDYIK 306
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G + +I + +K V+ LL+ ++ ++ F+ +F+ ++++ +N
Sbjct: 307 TFG------TTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFETFIN 360
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 260 (96.6 bits), Expect = 6.6e-31, Sum P(3) = 6.6e-31
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+ES L +++ +++Q KDVF R++K HL RR
Sbjct: 380 SRSPEYLSLFIDDKLKKGV--KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARR 437
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+ + S+ S
Sbjct: 438 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRHHLQTSQVS 495
Query: 520 I-GDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+ G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 496 LCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGSA 555
Query: 579 TI--TFSNEVGKYD 590
+ TF + K D
Sbjct: 556 DLNATFYGPIKKED 569
Score = 145 (56.1 bits), Expect = 6.6e-31, Sum P(3) = 6.6e-31
Identities = 54/262 (20%), Positives = 113/262 (43%)
Query: 154 IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAAT 213
I+ L+ + + ++ ER GE D + + + L +Y E FE ++ +
Sbjct: 155 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMVLGLKGRS---VYEEDFEIPFLDMS 211
Query: 214 ESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSF 273
F+ +++ +FL N Y+K +A+++EE R L+ S+ + + L+S
Sbjct: 212 AEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKH 270
Query: 274 KNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIAS 329
TI+ + M+ R+ +G+ M + + ++ G A + S
Sbjct: 271 MKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPNGLKTMCECMSWYLREQGKA--LVS 328
Query: 330 ADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKL 385
+ ++ Y++ LL+L ++F + ++++F +D F A D Y +N + L
Sbjct: 329 EEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSL 388
Query: 386 ELPTKQCTGIKTLPESKCPELL 407
+ K G+K L E + +L
Sbjct: 389 FIDDKLKKGVKGLTEQEVESIL 410
Score = 59 (25.8 bits), Expect = 6.6e-31, Sum P(3) = 6.6e-31
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 578 GTITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
G + + K+ L V+TFQM +L +N R F+ +
Sbjct: 577 GALLTGSNTRKHILQVSTFQMTILMLFNNREKFTFEEI 614
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 270 (100.1 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 68/208 (32%), Positives = 113/208 (54%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
+K EL+A + D LR +K T +E+E L V+++ +++ KDVF F+K L +R
Sbjct: 405 NKPAELIAKHVDSKLRAG--NKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDLAKR 462
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L++ SA + E++M+ L+ + G A + +KL MF+D+++S+D+ FKQ Y ++
Sbjct: 463 LLVGKSASVDAEKSMLSKLKHECG--AAFTSKLEGMFKDMELSKDIMVHFKQ-YMQNQSD 519
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
G + + IL G W + + V L E+ + FY KHSGRKLQW + +
Sbjct: 520 PGSIDLTVNILTMGYWPTYTP-MDVHLTPEMVKLQEVFKTFYLGKHSGRKLQWQTALGHA 578
Query: 579 TITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ + GK + V+ FQ VL +NE
Sbjct: 579 VLKAEFKEGKKEFQVSLFQTLVLLMFNE 606
Score = 150 (57.9 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 49/240 (20%), Positives = 104/240 (43%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + + +D ++ + D + L+ ER+GEA D L+ G+ + + S+ LQ+
Sbjct: 177 LELFRSHVISDRMVQTKTIDGILLLIARERSGEAVDRSLLRGL----LGMLSD----LQV 228
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE ++ T Y + +Q V Y+ + +L EE R YL+ S+ L
Sbjct: 229 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 288
Query: 261 LTDCCVTVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIV 319
+ C L+ IL + ++ R++ G +LQ +I
Sbjct: 289 IA-CVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSEYIK 347
Query: 320 NAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G + +I + +K V+ LL+ ++ ++ F+ + +F+ ++++ +N
Sbjct: 348 TFG------TTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEAFIN 401
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 357 (130.7 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 112/468 (23%), Positives = 212/468 (45%)
Query: 145 SWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREH 204
S+ ++ +++ + +D+ + L+ ER GE D L+ V + Y C N +L Y E
Sbjct: 136 SFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVY---CGNGMGELVKYEED 192
Query: 205 FEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDC 264
FE + + S+Y+ A+ + Q N YM A+ L E+ R YL S++ +L+
Sbjct: 193 FESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPKLVAKV 252
Query: 265 CVTVLVSSFKNTILAE---CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNA 321
+LV K I E C ++ I G+ P+ + HI
Sbjct: 253 QNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQHITVE 312
Query: 322 GLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTT 381
G A +I A D L ++ +Q L++ +F+ D+ ++
Sbjct: 313 GSA-LIKQATEAATDKAASTSGL-KVQDQV--LIRQLIDLHDKFMVYVDECFQKHSLFHK 368
Query: 382 VFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLK 441
K E C KT+ E+LA YCD +L+ ++L +++E L V+ +L
Sbjct: 369 ALK-EAFEVFCN--KTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLV 425
Query: 442 YVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKV 501
Y+ +KD+F F + RRL+ D + + E +++ +++ + A + +K+ M D+ +
Sbjct: 426 YISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKEL-LGAQFTSKMEGMLTDMTL 484
Query: 502 SQDLNYQFKQSYRGSKGS-IGDSINIKILNAGAWARGSERVT-VSLPLELEDYIPEVEDF 559
+++ F + +K +G + +L G W S + T ++LP+E+ + + + +
Sbjct: 485 AKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWP--SYKTTDLNLPIEMVNCVEAFKAY 542
Query: 560 YKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLD--VTTFQMAVLFAWN 605
Y K + R+L W + + GT + + K ++ VTT+Q AVL +N
Sbjct: 543 YGTKTNSRRLSWIYSL--GTCQLAGKFDKKTIEIVVTTYQAAVLLLFN 588
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 346 (126.9 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 138/595 (23%), Positives = 253/595 (42%)
Query: 54 SKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSL 113
S+I + LK + N+I + +Q + L+ Y++ W +F +L F +
Sbjct: 84 SEIYEKLKNYLKNYILNFKQ-----SNSETFLQFYVKRWKRFTIGAIFLNHAFDYMNRYW 138
Query: 114 VNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGE 173
V K S + K+ I V L L +W + +F+ K L + + V R G+
Sbjct: 139 VQKERS------DGKRHIF----DVNTLCLMTWKEVMFDPSKDVLINELLDQVTLGREGQ 188
Query: 174 AFDSQLVIGVRESYVNLCSNPED----KLQIYREHFEKAYIAATESFYTVKAAEFLQNNG 229
+ +S V L +P+D L +Y + FEK ++ T+ +YT ++L+ +
Sbjct: 189 IIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHS 248
Query: 230 VESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXX 289
V Y+ A + EE Y + + + L+ VL++ + E ++
Sbjct: 249 VTEYIFEAHEIIKREEKAMTIYWDDHTK-KPLSMALNKVLITDHIEKLENEFVVLLDARD 307
Query: 290 XXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAG---LADMIASADIITQDSEKYVERLLE 346
R I M E ++ G ++ ++A +E + L
Sbjct: 308 IEKITSLYALIRRDFTLIPRMASVFENYVKKTGENEISSLLAMHKHNIMKNENANPKKLA 367
Query: 347 LFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQ-----CTGIKTLPE- 400
L S KD K + L D + + N++ F ++P + C + E
Sbjct: 368 LMTAHSLSPKDYIK---KLLEVHD-IFSKIFNES--FPDDIPLAKALDNACGAFININEF 421
Query: 401 -----------SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVF 449
SK E+LA Y D+LL+K +K A ++ + +++ + KY+ +KD F
Sbjct: 422 ALPAGSPKSATSKTSEMLAKYSDILLKKA--TKPEVASDMSDE--DIITIFKYLTDKDAF 477
Query: 450 MRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQF 509
++ +RLI TS +E EEN+++ L+ +Y K+ +MFQDI++S+ L F
Sbjct: 478 ETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAANS-MEYTGKITKMFQDIRLSKILEDDF 536
Query: 510 KQSYRG----SKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHS 565
+ + SK D + +L W + V LP EL ++++ Y +KH+
Sbjct: 537 AVALKNEPDYSKAKYPD-LQPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHN 595
Query: 566 GRKLQWYHHMSNGTITFSNEVGK-----YDLDVTTFQMAVLFAWNERPLDRFQNL 615
GR L+W + G + ++GK ++ VT FQMA+L +N+ + +N+
Sbjct: 596 GRILKWLWPLCRGEL--KADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENI 648
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 259 (96.2 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 62/194 (31%), Positives = 102/194 (52%)
Query: 401 SKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRR 460
S+ PE L+ + D L+K K LT E+E+ L +++ +++Q KDVF R++K HL RR
Sbjct: 164 SRSPEYLSLFIDDKLKKGV--KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARR 221
Query: 461 LILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS 519
L+ + S + E+NM+ L+ + G + +KL MF+D+ +S +F+Q + + S
Sbjct: 222 LLTNKSVSDDSEKNMISKLKTECG--CQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVS 279
Query: 520 IGD-SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNG 578
+G + +++L G W S ++P FY KHSGR+L HHM +
Sbjct: 280 LGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSA 339
Query: 579 TI--TFSNEVGKYD 590
+ TF V K D
Sbjct: 340 DLNATFYGPVKKED 353
Score = 102 (41.0 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 41/197 (20%), Positives = 87/197 (44%)
Query: 219 VKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTIL 278
+++ +FL N Y+K +A+++EE R L+ S+ + + L+S TI+
Sbjct: 1 MESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTE-EPIVKVVERELISKHMKTIV 59
Query: 279 ----AECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIIT 334
+ M+ R+ +G+ M + + +++ G A + S +
Sbjct: 60 EMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKA--LVSEEGEG 117
Query: 335 QDSEKYVERLLELFNQFSKLVKDAFKDDPRF--LTARDKAYKNVVNDTT--VFKLELPTK 390
++ Y++ LL+L ++F + ++++F +D F A D Y +N + L + K
Sbjct: 118 KNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDK 177
Query: 391 QCTGIKTLPESKCPELL 407
G+K L E + +L
Sbjct: 178 LKKGVKGLTEQEVETIL 194
Score = 59 (25.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 580 ITFSNEVGKYDLDVTTFQMAVLFAWNERPLDRFQNL 615
+T SN K+ L V+TFQM +L +N R F+ +
Sbjct: 364 VTGSN-TRKHILQVSTFQMTILMLFNNREKYTFEEI 398
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 336 (123.3 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 124/499 (24%), Positives = 226/499 (45%)
Query: 143 LDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNP--EDKLQI 200
+ S N ++ D+ L+ + + ++Q ER+G D L+ + L E+ ++
Sbjct: 173 VSSSNNAVVADV---LKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYETEAEEESSKL 229
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKY---LESSSS 257
Y FE Y+ A+ +FY + L+ ++ A++ EE+ R C+Y L S S
Sbjct: 230 YLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKER-CQYTISLLSESK 288
Query: 258 VQLLTDCCVT----VLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQ- 312
++ + D + V +F+ T + D K +T +Q
Sbjct: 289 IKEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQK 348
Query: 313 ---DLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFK--DDPRFLT 367
++ I NA A A A + ++ ++ E +++ A K DD L
Sbjct: 349 RIVEMGNEINNASFALAQAPAQPKSTGTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALK 408
Query: 368 AR-DKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTA 426
+ D +K+ V + + + + + P S E L+ + D L+K K T
Sbjct: 409 KKFDGIWKDAFGSDQVLQSAITASFSSFLNSTPRSS--EFLSLFFDENLKKGVKGK--TD 464
Query: 427 DEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLR-DVGMP 485
+E+++ L N + +L+Y+++KD F ++K HL+RRL++ S + E M+ ++ +VG
Sbjct: 465 NEVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKMKMEVGN- 523
Query: 486 ADYVNKLARMFQDIKVSQDLNYQFKQSYR--GSKGSIGDSINIKILNAGAW-------AR 536
+ +L MF+D+ +S+DL +KQ R G ++I +L + W +R
Sbjct: 524 -QFTQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIMSSSR 582
Query: 537 -GSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTI--TF--SN-EVGKYD 590
G + +P E+E E FY KHSGRKL W M I TF SN +V +++
Sbjct: 583 DGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHE 642
Query: 591 LDVTTFQMAVLFAWNERPL 609
L+V+T+ M +L +N+ P+
Sbjct: 643 LNVSTYAMFILLLFNDIPI 661
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 175 (66.7 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 53/239 (22%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFNDIKQRLQ--DSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D K + + D + L++ ERNGEA D L+ S +N+ S+ LQI
Sbjct: 198 LELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLL----RSLLNMLSD----LQI 249
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 250 YQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 309
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 310 IASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKA 369
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 370 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFIN 422
Score = 130 (50.8 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 419 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 475
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLR 480
+K L +RL++ SA + E++M+ L+
Sbjct: 476 YKKDLAKRLLVGKSASVDAEKSMLSKLK 503
Score = 125 (49.1 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 489 VNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLE 548
V K A + + + L +++ Q+ + G+I + + IL G W + V LP E
Sbjct: 486 VGKSASVDAEKSMLSKLKHEYMQN-QNVPGNI--ELTVNILTMGYWPTYVP-MEVHLPPE 541
Query: 549 LEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ + FY KHSGRKLQW + + + + GK +L V+ FQ VL +NE
Sbjct: 542 MVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 599
Score = 40 (19.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 311 LQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARD 370
L++L + N L SA++ Q + + + +QF K FKD FL D
Sbjct: 106 LEELYQAVEN--LCSYKISANLYKQLRQICEDHIKAQIHQF----KTGFKDTVLFLKKID 159
Query: 371 KAYKN 375
+ ++N
Sbjct: 160 RCWQN 164
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 320 (117.7 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 130/618 (21%), Positives = 271/618 (43%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL--WDEKGPSKIVDA----LKED 63
F W ++ + + Q+ SQ ++ L+ +++ L + EK + + D LKE+
Sbjct: 22 FATHWEVLQRAIGDIFQKS-TSQLSFEELYRNAYILVLHKYGEKLYNHVQDVIRSRLKEE 80
Query: 64 IMNFI-RHAQQRVLAHEE-DQALLKAYIQEWSKFL-AQCSYLPTPFRQLETSLVNKSVST 120
+ I ++ +L + D +Y WS+ L A +L + + +V+ + +
Sbjct: 81 TVPAIYKNYDASLLGNALLDIRKNDSYSTSWSRSLEAAHRFLSSLVNSWKDHIVSMQMIS 140
Query: 121 SLTNNNNK-QKISAEESTVRVLMLDSWNQSIF-N--DIKQRLQDSAMKLVQSERNGEAFD 176
S+ +K SA++ V + + + + N +I ++ ++ + LV ER G +
Sbjct: 141 SVLKYLDKVYSKSADKVPVNENGIYIFREVVLLNSFEIGEKCVETILILVYLERKGNTIN 200
Query: 177 SQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKY 236
L+ + +N + K +Y F +++ T +FY ++++ + GV Y+K
Sbjct: 201 RPLINDCLDM-LNSLPSENKKETLYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKK 259
Query: 237 ADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECP----KMIXXXXXXX 292
A+ + EE+ R+ YL + + LL+ L+S + +L MI
Sbjct: 260 AEKRFEEEKERSKNYLFTKIASPLLS-VVEDELLSKHLDDLLENQSTGFFSMIDSSNFEG 318
Query: 293 XXXXXXXXDRIKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFS 352
R++ G+ + + L ++ + G +I + + + +E + + + S
Sbjct: 319 LQLVYESFSRVELGVKSLKKYLAKYVAHHG--------KLINETTSQALEGKMAV-GRLS 369
Query: 353 KLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPE--SKCPELLANY 410
A + L D+ +++ T + T + ++ PE ++ +
Sbjct: 370 SNATMATLWVQKVLALWDRL-NTIISTTMDADRSILNSLSDAFVTFVDGYTRAPEYISLF 428
Query: 411 CDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSE 470
D L+K +++ IE+ L+N + + +++ KDVF +++K HL +RL+ + S S+
Sbjct: 429 IDDNLKKD--ARKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSISSD 486
Query: 471 KEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILN 530
E M+ L+ + KL MF D+ +SQ+L ++K + +N+ IL
Sbjct: 487 AELGMISRLKQEAGNV-FTQKLEGMFNDMNLSQELLQEYKHNSALQSAKPALDLNVSILA 545
Query: 531 AGAWA--RGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGK 588
+ W ++ + P L I + DFY KH+GRKL WY M + + + + K
Sbjct: 546 STFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRK 605
Query: 589 YDLDVTTFQMAVLFAWNE 606
YDL+V+T +L + +
Sbjct: 606 YDLNVSTIASVILLLFQD 623
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 308 (113.5 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 122/498 (24%), Positives = 231/498 (46%)
Query: 132 SAEESTVRVLMLDSWNQSIFND--IKQRLQDSAMKLVQSER---NGEAFDSQLVIGVRES 186
S E +R + L + Q I++D +++++ A LV ++R NG DS L+ E
Sbjct: 258 SKEHPVIREMGLQQFRQHIYSDPTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIEL 317
Query: 187 YVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNG-VESYMKYADAKLHEEE 245
+ L +Y FE ++ ++ F+++ A + + G + SY++ + +L E E
Sbjct: 318 F--------HSLDVYVSGFEPVLVSGSKDFFSLWAQQ--EATGYLASYVENSH-RLIERE 366
Query: 246 LRACKYLE-SSSSVQLLTDCCVTVLVSSFKNTILAECPKM--IXXXXXXXXXXXXXXXDR 302
+ C+ + ++ Q L++ LV+ ++ +L++ + + +R
Sbjct: 367 MNRCEQFSFNRTTKQKLSESLDQTLVTDQESVLLSQKDVLGLLRIGNKIALGQLYTLLER 426
Query: 303 IKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKD 361
+D + +IV G I+ +SE V RLL Q + ++F+
Sbjct: 427 -RDLGAKLKGAFSTYIVEEGTG-------IVFDESEADMVVRLLSFKKQLDDIWNESFRR 478
Query: 362 DPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLR----- 416
+ A +++++ +N TG P K E++A Y D LLR
Sbjct: 479 NEGLGHALRESFESFMNKGR-------KSDATGGTDNP--KTGEMIAKYVDRLLRGGWRL 529
Query: 417 -KTPLSKRLT-ADE---IESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEK 471
T ++ + ADE I +L VL + ++V K VF F+K L RRL++ SA +
Sbjct: 530 APTREAENMPLADEDAEINRQLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDA 589
Query: 472 EENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILN 530
E++M+ L+ + G + + + L MF+D++V++D + R + + +++ +L+
Sbjct: 590 EKSMLARLKTECG--SSFTHNLESMFKDMEVARDEMSAYNSIKRERQTPLPVDLHVSVLS 647
Query: 531 AGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYD 590
A AW + V V +P E+ I + E FY K++GRKL W H +++ + G +
Sbjct: 648 ASAWPTYPD-VQVRIPPEIATAISDFEKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNKE 706
Query: 591 LDVTTFQMAVLFAWNERP 608
L V++FQ VL +NE P
Sbjct: 707 LVVSSFQAIVLLLFNELP 724
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 212 (79.7 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 53/167 (31%), Positives = 89/167 (53%)
Query: 404 PELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLIL 463
PE +A Y D +LR K ++ E+++KL NV+++ +Y+Q KDVF ++ K +L +RL+L
Sbjct: 391 PEFVALYMDDMLRSG--LKCVSDAEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLL 448
Query: 464 DTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD 522
D S + E+ ++ L+ + G + KL MF+D ++ L F+ +
Sbjct: 449 DKSCSDDVEKALLAKLKTECG--CQFTQKLENMFRDKELWLTLATSFRDWREAQPTKMSI 506
Query: 523 SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKL 569
I++++L AG W V LP EL +Y +KH+GRKL
Sbjct: 507 DISLRVLTAGVWPTVQCNPVV-LPQELSVAYEMFTQYYTEKHTGRKL 552
Score = 147 (56.8 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 55/252 (21%), Positives = 111/252 (44%)
Query: 141 LMLDSWNQSIF--NDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKL 198
L LD++ I N I R++D+ ++L++ +R + G++ + L S D
Sbjct: 140 LGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWH---GIKNACDMLISLGIDSR 196
Query: 199 QIYREHFEKAYIAATESFYTVKAAEFLQ-NNGVESYMKYADAKLHEEELRACKYLESSSS 257
+Y + FE+ + T +Y +L +N Y+ + +H+E RA +YL+ +
Sbjct: 197 TVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTE 256
Query: 258 VQLLTDCCVTVLVSSFKNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGIT-P--- 309
++L V+V+ TI+ M+ RI D +T P
Sbjct: 257 AKIL-QVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGG 315
Query: 310 ---MLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFL 366
+L+ + ++ G ++++ + D++ ++ +V LL+L + FS L+ AF DD F
Sbjct: 316 LKALLKAVSEYLNETG-SNIVKNEDLL-KNPVNFVNELLQLKDYFSSLLTTAFADDRDFK 373
Query: 367 TARDKAYKNVVN 378
++ +N
Sbjct: 374 NRFQHDFETFLN 385
Score = 40 (19.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 10/69 (14%), Positives = 30/69 (43%)
Query: 113 LVNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSA----MKLVQS 168
L+ +++ NN+ ++L + ++N +K +QD +++++S
Sbjct: 33 LLKRAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGERLYNGLKDVIQDHMASVRIRIIES 92
Query: 169 ERNGEAFDS 177
+G ++
Sbjct: 93 MNSGSFLET 101
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 212 (79.7 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 53/167 (31%), Positives = 89/167 (53%)
Query: 404 PELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLIL 463
PE +A Y D +LR K ++ E+++KL NV+++ +Y+Q KDVF ++ K +L +RL+L
Sbjct: 391 PEFVALYMDDMLRSG--LKCVSDAEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLL 448
Query: 464 DTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD 522
D S + E+ ++ L+ + G + KL MF+D ++ L F+ +
Sbjct: 449 DKSCSDDVEKALLAKLKTECG--CQFTQKLENMFRDKELWLTLATSFRDWREAQPTKMSI 506
Query: 523 SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKL 569
I++++L AG W V LP EL +Y +KH+GRKL
Sbjct: 507 DISLRVLTAGVWPTVQCNPVV-LPQELSVAYEMFTQYYTEKHTGRKL 552
Score = 147 (56.8 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 55/252 (21%), Positives = 111/252 (44%)
Query: 141 LMLDSWNQSIF--NDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKL 198
L LD++ I N I R++D+ ++L++ +R + G++ + L S D
Sbjct: 140 LGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWH---GIKNACDMLISLGIDSR 196
Query: 199 QIYREHFEKAYIAATESFYTVKAAEFLQ-NNGVESYMKYADAKLHEEELRACKYLESSSS 257
+Y + FE+ + T +Y +L +N Y+ + +H+E RA +YL+ +
Sbjct: 197 TVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTE 256
Query: 258 VQLLTDCCVTVLVSSFKNTIL----AECPKMIXXXXXXXXXXXXXXXDRIKDGIT-P--- 309
++L V+V+ TI+ M+ RI D +T P
Sbjct: 257 AKIL-QVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGG 315
Query: 310 ---MLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFL 366
+L+ + ++ G ++++ + D++ ++ +V LL+L + FS L+ AF DD F
Sbjct: 316 LKALLKAVSEYLNETG-SNIVKNEDLL-KNPVNFVNELLQLKDYFSSLLTTAFADDRDFK 373
Query: 367 TARDKAYKNVVN 378
++ +N
Sbjct: 374 NRFQHDFETFLN 385
Score = 40 (19.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 10/69 (14%), Positives = 30/69 (43%)
Query: 113 LVNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSA----MKLVQS 168
L+ +++ NN+ ++L + ++N +K +QD +++++S
Sbjct: 33 LLKRAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGERLYNGLKDVIQDHMASVRIRIIES 92
Query: 169 ERNGEAFDS 177
+G ++
Sbjct: 93 MNSGSFLET 101
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 279 (103.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 76/289 (26%), Positives = 146/289 (50%)
Query: 323 LADMIASADIITQDSEKYVERL-LELFNQFSK---LVKDAFKDDPRFLTARDKAYKNVVN 378
L + + I + + Y+++ +++ N K L++D R +++ N
Sbjct: 335 LLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFSK--N 392
Query: 379 DTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLL 438
+ + L+ + K ++K EL+A + D L+ KR++ +E+E+ L L+
Sbjct: 393 ELLTYALKESFEYFINTK---QNKPAELVARFIDSKLKVG--GKRMSEEELETVLNKSLI 447
Query: 439 VLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQ 497
+ +Y+Q KDVF F+K L++RL+LD S + E++M+ L+ + G + KL MF+
Sbjct: 448 LFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECG--TTFTAKLEEMFK 505
Query: 498 DIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVE 557
DI++S D+ F+ S ++ +NI +L +G W + +LP E +Y
Sbjct: 506 DIELSNDIMNSFRDSPM-TQNFKSIEMNIYVLTSGNWPI-QPPIEATLPKEFLEYQEVFN 563
Query: 558 DFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
FY KH+G+ L+W + +S + + GK +L V+ FQ +L+ +N+
Sbjct: 564 KFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND 612
Score = 121 (47.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 73/300 (24%), Positives = 129/300 (43%)
Query: 147 NQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFE 206
N S ++++++ DS + ++ ER G+ D L+ S V + S+ L IY + FE
Sbjct: 192 NLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLI----HSLVKMLSS----LNIYTK-FE 242
Query: 207 KAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCV 266
+I T FY ++ + Y+KY +L++E R +YLE S+ QL+
Sbjct: 243 IEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMA-VLD 301
Query: 267 TVLVSSFKNTILAE-CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNAG--- 322
L+ + IL + M+ + + + I + + +++I G
Sbjct: 302 RQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIKQTGIQM 360
Query: 323 LADMIASADIITQDSEKYVERLLELFNQ-FSK--LVKDAFKDD-PRFLTARDKAYKNVVN 378
L D A +I QD Y +RL + +Q FSK L+ A K+ F+ + +V
Sbjct: 361 LNDKEKEATLI-QDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVA 419
Query: 379 DTTVFKLELPTKQCTG--IKTLPESKCPELLANYC---DML--LRKTPLSKRLTADEIES 431
KL++ K+ + ++T+ +L Y D+ K LSKRL D+ S
Sbjct: 420 RFIDSKLKVGGKRMSEEELETVLNKSL--ILFRYIQGKDVFEAFYKQDLSKRLLLDKSTS 477
Score = 49 (22.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 34/176 (19%), Positives = 71/176 (40%)
Query: 5 KGTQTFEDK-WPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKED 63
K +ED W + + + ++ + + + L+ V +C +D+ S + + +
Sbjct: 61 KTPDNYEDSSWNKLSSAITSINMKQATTLTQ-EELYKMVENLC-FDKILASNLYNKISVQ 118
Query: 64 IMNFIRHA-QQRVLAHEEDQAL-LKAYIQEWSKFLAQCSYLPTPFRQLETSLV--NKSVS 119
I I + VL D + LK+ W Q + + F L+ + V N +
Sbjct: 119 IEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTV 178
Query: 120 TSLTN-------NNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQS 168
S+ + NN Q+ + E T+ L+ + ++I + L S +K++ S
Sbjct: 179 KSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSS 234
Score = 38 (18.4 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 108 QLETSLVNKSVSTSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQ 167
++ET + K V L + E+ST + LM Q I + L+ +V
Sbjct: 263 EIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKGFNAMVN 322
Query: 168 SER 170
+R
Sbjct: 323 GDR 325
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 273 (101.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 88/295 (29%), Positives = 143/295 (48%)
Query: 335 QDSEKYVER--LLELFNQFSKLVKDA-FKDDPR-FLTAR---DKAYKNVVNDT----TVF 383
+D Y+E+ L E +L KD+ K P+ ++T + Y N++N +F
Sbjct: 289 EDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNALF 348
Query: 384 --KLELPTK---QCTGIKTL-PE----SKCPELLANYCDMLLRKTPLSKRLTADEIESKL 433
L+ +K + + L PE ++ + LA YCD LL+K SK DE + L
Sbjct: 349 MQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKN--SK--VQDE--TAL 402
Query: 434 RNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDV-GMPADYVNKL 492
L VLKY+ KDVF +++ + R+I ++SA + EE + L G+ +Y L
Sbjct: 403 DKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGL--EYTRNL 460
Query: 493 ARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDY 552
+M +D K+S+DL +FK + K SI N+ + GAW +++ + LP EL
Sbjct: 461 VKMVEDAKISKDLTTEFKD-IKTEK-SI--DFNVILQTTGAWP-SLDQIKIILPRELSTI 515
Query: 553 IPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNER 607
+ E + FY H+GR+L W + G + KY VT Q+ L+ +NE+
Sbjct: 516 LKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQ 570
Score = 265 (98.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 124/536 (23%), Positives = 225/536 (41%)
Query: 9 TFEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLW------DEKGPSKIVDALKE 62
+ E W +++ + L ++E +S+ + L+ AV+ +C + P + L +
Sbjct: 2 SIEAVWGTLQDGLNLLYRREHMSKKYYMMLYDAVYNICTTTTLANSNNNSPEFASEFLYK 61
Query: 63 DIMNFIRH----AQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSV 118
+ N+IR + R+ A D+ L K I EW F F+ L + V+K V
Sbjct: 62 QLENYIRTYVIAIRDRISACSGDELLGKCTI-EWDNFKFSTRICNCIFQYLNRNFVSKKV 120
Query: 119 STSLTNNNNKQKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQ 178
+ N + + + L LD W F++ K + D+ ++L+ ER G +S
Sbjct: 121 E-----DKNGEIVE-----IYKLALDIWKAEFFDNFKVKTIDAILELILLERCGSTINST 170
Query: 179 LVIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYAD 238
+ V E C +L IY+ FE ++ AT+ FY K V YM +
Sbjct: 171 HISSVVE-----CLT---ELDIYKVSFEPQFLDATKLFY--KQEVLNSKETVIEYMITVE 220
Query: 239 AKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXX 298
+L +EE R+ +YL S++ LL D C ++L+S + +E +++
Sbjct: 221 NRLFQEEYRSRRYLGPSTN-DLLIDSCESILISDRLKFLHSEFERLLEARKDEHLTRMYS 279
Query: 299 XXDRIKDGITPMLQDLEAHIVNAGLADM--IASADIITQDSEKYVERLLELFNQFSKLVK 356
R+ G+ + LE I+ G + +A + ++Y+ +LLE+ + L+
Sbjct: 280 LCRRVTHGLEDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLIN 339
Query: 357 DAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLR 416
AF + F+ + DKA K+ + V L + T C +LL +
Sbjct: 340 KAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKN-SKVQD 398
Query: 417 KTPLSKRLTADEIESKLRNVLLVLKYVQN--KDVFMRFHKAH--LTRRLILDTSADS--E 470
+T L K LT + S+ ++V + Y QN + + A + I + +A E
Sbjct: 399 ETALDKALTVLKYISE-KDVFQL--YYQNWFSERIINNSSASDDAEEKFITNLTATEGLE 455
Query: 471 KEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGDSINI 526
N+V+ + D + D L F+DIK + +++ G+ S+ D I I
Sbjct: 456 YTRNLVKMVEDAKISKD----LTTEFKDIKTEKSIDFNVILQTTGAWPSL-DQIKI 506
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 244 (91.0 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 59/176 (33%), Positives = 99/176 (56%)
Query: 433 LRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNK 491
L ++++ +++ KDVF F+K L +RL++ SA + E++M+ L+ + G A + +K
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECG--AAFTSK 59
Query: 492 LARMFQDIKVSQDLNYQFKQSYRGSKGSIGD-SINIKILNAGAWARGSERVTVSLPLELE 550
L MF+D+++S+D+ QFKQ Y ++ G+ + + IL G W + V LP E+
Sbjct: 60 LEGMFKDMELSKDIMIQFKQ-YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVHLPPEMV 117
Query: 551 DYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAWNE 606
+ FY KHSGRKLQW + + + + GK +L V+ FQ VL +NE
Sbjct: 118 KLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNE 173
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 259 (96.2 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 80/274 (29%), Positives = 136/274 (49%)
Query: 345 LELFNQFSKLVKDAFKD-DP-----RFLTARDKAYKNVVN-----DTTVFKLELPTKQCT 393
L L +LV D K DP R L RDK Y ++N D T F+ L +
Sbjct: 310 LHLREMGKQLVTDPEKSKDPVEFVQRLLDERDK-YDRIINMAFNNDKT-FQNALNSSFEY 367
Query: 394 GIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFH 453
+ ++ PE ++ + D LRK K + ++++ L V+++ +Y+Q KDVF +++
Sbjct: 368 FVNL--NTRSPEFISLFVDDKLRKG--LKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYY 423
Query: 454 KAHLTRRLILDTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQS 512
K HL +RL+ + + E N++ L+ + G + +KL MF D+K S D F S
Sbjct: 424 KQHLAKRLLSGKTVSDDAERNLIVKLKTECGY--QFTSKLEGMFTDMKTSHDTLLGFYNS 481
Query: 513 YRGSKGSIGDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWY 572
+ + S G ++ +++L G+W + +LP E+ + +Y H+GR+L W
Sbjct: 482 H--PELSEGPTLVVQVLTTGSWPT-QPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQ 538
Query: 573 HHMSNGTITFSNEVG-KYDLDVTTFQMAVLFAWN 605
+M I G K++L+V+TFQM VL +N
Sbjct: 539 TNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFN 572
Score = 201 (75.8 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 67/296 (22%), Positives = 138/296 (46%)
Query: 131 ISAEEST-VRVLMLDSWNQSIF--NDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESY 187
+S + T V L L W ++ + I+ RL ++ + LV ER GE D L+ V + +
Sbjct: 125 VSTTKKTHVHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVIKMF 184
Query: 188 VNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELR 247
++L + +Y++ FEK ++ A+ FY V++ EF+++ Y+K A+ L EE R
Sbjct: 185 MDLGES------VYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVER 238
Query: 248 ACKYLESSSSVQLLTDCCVTVLVSSFKNTILAE---CPKMIXXXXXXXXXXXXXXXDRIK 304
YL++ S ++ + ++ + + + E M+ R+
Sbjct: 239 VVNYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVA 298
Query: 305 DGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPR 364
+G+ + + H+ G ++ + ++D ++V+RLL+ +++ +++ AF +D
Sbjct: 299 NGLVTVRDVMTLHLREMG-KQLVTDPEK-SKDPVEFVQRLLDERDKYDRIINMAFNNDKT 356
Query: 365 FLTARDKAYKNVVNDTT----VFKLELPTKQCTGIKTLPESKCPELLANYCDMLLR 416
F A + +++ VN T L + K G+K + E +L+ + ML R
Sbjct: 357 FQNALNSSFEYFVNLNTRSPEFISLFVDDKLRKGLKGVGEEDV-DLILDKVMMLFR 411
Score = 43 (20.2 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 390 KQCTGIKTLPESKCPELLANYCDM-LLRKTPLSKRLTADE 428
+Q T I T +C + +A +LRK P+SK + ++
Sbjct: 583 EQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEED 622
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 256 (95.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 96/377 (25%), Positives = 166/377 (44%)
Query: 145 SWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREH 204
S++ ++ +I+ +D + L+ ER GE D LV V + Y C N ++ IY E
Sbjct: 144 SFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVY---CGNGVGQMVIYEED 200
Query: 205 FEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDC 264
FE + T S+Y+ KA+ + Q + YM A+ L E+ R YL S++ +L+
Sbjct: 201 FESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHSTTEPKLVEKV 260
Query: 265 CVTVLVSSFKNTILAE---CPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVNA 321
+LV K I E C ++ I G+ P+ + H+
Sbjct: 261 QNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIADLFKQHVTAE 320
Query: 322 GLADMIASADIIT-QDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDT 380
G A + +AD T QD+ +Q LV+ + +++ D+ ++ +
Sbjct: 321 GNALIKQAADAATNQDASA---------SQV--LVRKEIELHDKYMVYVDECFQK---HS 366
Query: 381 TVFKLELPTKQCTGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVL 440
KL + KT+ + E+LA YCD +L+ S++L+ + E L V+ +L
Sbjct: 367 LFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLL 426
Query: 441 KYVQNKDVFMRFHKAHLTRRLILDTSADSEKEENMVEWLRDVGMP-ADYV--NKLARMFQ 497
Y+ +KD+F F++ RRL+ D S KE + R++ DY+ N ++
Sbjct: 427 VYISDKDLFAEFYRKKQARRLLFDRSGIM-KEVTDITLARELQTNFVDYLSANMTTKLGI 485
Query: 498 DIKVSQDLNYQFKQSYR 514
D V+ L F SY+
Sbjct: 486 DFTVTV-LTTGFWPSYK 501
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 169 (64.5 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 382 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 433
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE R YL+ ++ L
Sbjct: 434 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 493
Query: 261 LTDCCVTVLVSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPMLQDLEAHIVN 320
+ +L + ++ R++ G+ +LQ +I
Sbjct: 494 IATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKA 553
Query: 321 AGLADMIASADIITQDSEK-YVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
G S +I + +K V+ LL+ ++ ++ F + +F+ A +A++ +N
Sbjct: 554 FG------STIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 606
Score = 131 (51.2 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 393 TGIKTLPESKCPELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRF 452
T I P +K EL+A Y D LR +K T +E+E L ++++ +++ KDVF F
Sbjct: 603 TFINKRP-NKPAELIAKYVDSKLRAG--NKEATDEELEKMLDKIMIIFRFIYGKDVFEAF 659
Query: 453 HKAHLTRRLILDTSADSEKEENMVEWLRDVGM 484
+K L +RL++ SA + E++M+ L+ GM
Sbjct: 660 YKKDLAKRLLVGKSASVDAEKSMLSKLKH-GM 690
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 239 (89.2 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 66/228 (28%), Positives = 111/228 (48%)
Query: 355 VKDAFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPESKCPELLANYCDML 414
+KD F A D+ +KNV++ L L +K PE L+ + D
Sbjct: 509 LKDRFDQFLVHSFANDRIFKNVISSDFEHFLNL------------NNKSPEYLSLFIDDK 556
Query: 415 LRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDTSADSEKEEN 474
L+K K ++ EIES L +++ +++ KDVF R++K HL +RL+L+ S + E+N
Sbjct: 557 LKKG--GKGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLLNKSVSDDFEKN 614
Query: 475 MVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD-SINIKILNAG 532
M+ L+ + G + +KL MF+D+ VS + +FK + S+G + ++IL G
Sbjct: 615 MISKLKTECG--CQFTSKLEGMFKDMSVSNTIMDEFKNFVNNNNLSLGGVELTVRILTTG 672
Query: 533 AWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTI 580
W + ++P + ++FY KHSGR+L M I
Sbjct: 673 FWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTLQPQMGTAYI 720
Score = 167 (63.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 64/318 (20%), Positives = 135/318 (42%)
Query: 151 FNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAYI 210
+++I++ L++ + +V ER+GEA + + + L N +Y E FEK ++
Sbjct: 313 YSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRT---VYEEDFEKPFL 369
Query: 211 AATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLV 270
A + +FY ++ FL N Y+K +A++ EE RA YL+ + +++ ++
Sbjct: 370 AQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRIVRVVEEELIK 429
Query: 271 SSFKNTILAE---CPKMIXXXXXXXXXXXXXXXDRIKD-GITPMLQDLEAHIVNAGLADM 326
+ + E MI R+K+ G+ + + A++ G +
Sbjct: 430 KHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMSAYLREQGRM-L 488
Query: 327 IASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVNDTTVFKLE 386
+ + + +V+ LL+L ++F + + +F A D+ +KNV++ L
Sbjct: 489 VKEEENGNTNPITFVQNLLDLKDRFDQFLVHSF--------ANDRIFKNVISSDFEHFLN 540
Query: 387 LPTKQCTGIKTLPESKCPE----LLANYCDMLLRKTPLSKR-LTADEIESKLRNVLLVLK 441
L K + + K + + + +L KT + R L ++ + L +
Sbjct: 541 LNNKSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAKR 600
Query: 442 YVQNKDVFMRFHKAHLTR 459
+ NK V F K +++
Sbjct: 601 LLLNKSVSDDFEKNMISK 618
Score = 51 (23.0 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 588 KYDLDVTTFQMAVLFAWNERPLDRFQNL 615
K+ L V+T+QM VL +N R + + ++
Sbjct: 754 KHILQVSTYQMCVLLLFNNRDVLTYDDI 781
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 217 (81.4 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 64/265 (24%), Positives = 130/265 (49%)
Query: 353 KLVKDAFKDDP--RFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTL------PESKCP 404
KLV D KDD + L + K + VV+++ + L +T + + P
Sbjct: 320 KLVNDESKDDTLVQELLSFHKFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAP 379
Query: 405 -ELLANYCDMLLRKTPLSKRLTADE-IESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLI 462
L+A Y D LLR + ++ + + ++ +L + +Y+ +KD+F ++K + +RL+
Sbjct: 380 ARLIAKYIDYLLR---VGEQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLL 436
Query: 463 LDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGS--I 520
L+ SA ++ E +++ L+ + + + L MF+D+ +S++ F S+R SK + +
Sbjct: 437 LNKSASAQNELMLLDMLKKT-CGSQFTHSLEGMFRDVNISKE----FTSSFRHSKAAHNL 491
Query: 521 GDSINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTI 580
+ + +L+ W E + LP +++ + E FY K G+K+ WY + + +
Sbjct: 492 HRDLYVNVLSQAYWPSYPES-HIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIV 550
Query: 581 TFSNEVGKYDLDVTTFQMAVLFAWN 605
+G +L ++ FQ VL +N
Sbjct: 551 KARFPLGNKELSISLFQACVLLQFN 575
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 148 (57.2 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 50/186 (26%), Positives = 97/186 (52%)
Query: 405 ELLANYCDMLLRKTPLSKRLTAD-EIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLIL 463
E ++ Y D L++ K +D E+ + L +++++Y+++KD+F R+++ HL RRL L
Sbjct: 442 EFVSLYIDENLKRGIRGK---SDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRL-L 497
Query: 464 DTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD- 522
+ A SE+ E + + + + + +K MF+DI +S++L+ ++ + R S G +
Sbjct: 498 HSRASSEEAEKQLITMMQLELGKHFTSKFEGMFKDITISEELSTKYGEHIR-SLGDVDVH 556
Query: 523 ----SINIKILNAGAW-----ARGSERVTVSLPLELE-DYIPEV---ED----FYKKKHS 565
+ I +L + +W R ++ P ++ +Y PE+ +D FY K S
Sbjct: 557 HKPIDLAISVLTSNSWPPDVMGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRS 616
Query: 566 GRKLQW 571
GR L W
Sbjct: 617 GRVLTW 622
Score = 109 (43.4 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 166 VQSERNGEAFDSQLVIGVRESYVNLCSNPE--DKLQIYREHFEKAYIAATESFYTVKAAE 223
+ ER G+ + L+ + +L E D ++Y FE + A+ +FY +A +
Sbjct: 190 IDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLLEASRTFYRSEALK 249
Query: 224 FLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVLVSSFKNTILA 279
L+N +++ +L EEE R CK S+ S++ +T L+S+ N LA
Sbjct: 250 LLRNGDASIWIRQTHRRLLEEEDR-CKTTLSTLSIEKMTRAVEAELISAHLNDFLA 304
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 537 GSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTI--TFSNEVG------- 587
G V + P E++ FY K SGR L W + I F G
Sbjct: 588 GPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFPPVKGMSGPLSR 647
Query: 588 --KYDLDVTTFQMAVLFAWN 605
+Y+L+V+T+ M VL +N
Sbjct: 648 ERRYELNVSTYGMVVLMLFN 667
Score = 49 (22.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 339 KYVERLLELFNQFSKLVKDAFKDDPRFLTARDKAYKNVVN 378
K+V +L+L +F + + +F DP T K + + ++
Sbjct: 396 KWVHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIH 435
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 208 (78.3 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 51/205 (24%), Positives = 107/205 (52%)
Query: 405 ELLANYCDMLLRKTPLSKRLTADE-IESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLIL 463
EL++ + LL + +K ++ D ++ + +++ +Y++ KDVF ++K L +RL L
Sbjct: 477 ELISKHFHTLLHSS--NKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFL 534
Query: 464 DTSADSEKEENMVEWLR-DVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD 522
+ SA + E+ ++ L+ + G Y KL MF+D+ S++ F Q Y
Sbjct: 535 ERSASVDAEKMVLCKLKTECGSAFTY--KLEGMFKDMDASENYGRLFNQ-YLEHMNKEKA 591
Query: 523 SINIKILNAGAWARGSERVTVSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITF 582
+ +++ W + +++P E+ D + + +DFY+ +H R ++W+H +++ I+
Sbjct: 592 NFTARVITPEYWPT-YDTYEINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISA 650
Query: 583 SNEVG-KYDLDVTTFQMAVLFAWNE 606
S G K +L T +Q +L +N+
Sbjct: 651 SFRPGCKKELIATMYQTVILLLFNK 675
Score = 48 (22.0 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 14 WPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIV-DALKEDIMNFIR--- 69
W + V +L+ + + LF V VC +K SK++ D L ++ F +
Sbjct: 122 WAVLSDNVFAILEDRK-TVTTLEGLFSKVRSVC---DKNQSKVLYDRLVAIVVQFAKSLK 177
Query: 70 ---HAQQRV-LAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLE 110
+A ++V LA + + L+ + Q W + + + + F L+
Sbjct: 178 ESLNAVEQVPLAEDNCEQYLEKFGQIWQAYPVKINLIRNIFLHLD 222
Score = 48 (22.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 303 IKDGITPMLQDLEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKDA 358
+ D + +L+D + GL + S Q Y +RL+ + QF+K +K++
Sbjct: 125 LSDNVFAILEDRKTVTTLEGLFSKVRSVCDKNQSKVLY-DRLVAIVVQFAKSLKES 179
Score = 44 (20.5 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 196 DKLQIYR--EHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHE-EELRACKYL 252
D LQ E F K I+ Y + + + YM+Y + +++ +L +
Sbjct: 287 DMLQTVHVSEEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVNFD 346
Query: 253 ESSS--SVQL-LTDCCV 266
E S+ VQ +T+C +
Sbjct: 347 EPSALKDVQATVTNCLI 363
Score = 43 (20.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 340 YVERLLELFNQFSKLVKDAFKDDPRFL 366
Y+E + N++S+LVK F D+P L
Sbjct: 326 YMEYCEDQINRYSQLVKVNF-DEPSAL 351
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 161 SAMKLVQSERNGEAFDSQLVIGVRESYVN--LCSNPEDKLQIYREHFE 206
S + ++Q+ E F L+ +RE Y N + P+ Y E+ E
Sbjct: 284 SLVDMLQTVHVSEEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCE 331
>UNIPROTKB|Q5T2B4 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00643617
SMR:Q5T2B4 Ensembl:ENST00000421317 Uniprot:Q5T2B4
Length = 216
Score = 173 (66.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 45/208 (21%), Positives = 96/208 (46%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
RH +RVL EE +L Y + W ++ Y+ +R L T + K+ T
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTEADLQYGY 127
Query: 129 QKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRES 186
+ E + + L LD W + + ++ L ++ ++++R GE + +++ GV S
Sbjct: 128 GGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINS 187
Query: 187 YVNLCSNPED-KLQIYREHFEKAYIAAT 213
+V++ + L+ Y+E FE ++ T
Sbjct: 188 FVHVEQYKKKFPLKFYQEIFESPFLTET 215
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 170 (64.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 486 ADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKGSIGD-SINIKILNAGAWARGSERVTVS 544
A + +KL MF+D+++S+D+ QFKQ Y ++ G+ + + IL G W + V
Sbjct: 4 AAFTSKLEGMFKDMELSKDIMIQFKQ-YMQNQNVPGNIELTVNILTMGYWPTYVP-MEVH 61
Query: 545 LPLELEDYIPEVEDFYKKKHSGRKLQWYHHMSNGTITFSNEVGKYDLDVTTFQMAVLFAW 604
LP E+ + FY KHSGRKLQW + + + + GK +L V+ FQ VL +
Sbjct: 62 LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMF 121
Query: 605 NE 606
NE
Sbjct: 122 NE 123
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 163 (62.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 400 ESKCP-ELLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLT 458
E P E L+ Y D +++T K +I+ L + ++ + KD+F + +K L+
Sbjct: 380 EGALPSEYLSTYVDHCMKRTK-EKDAEIVKIKQDLLDSTKLIGLLTEKDIFEKIYKKQLS 438
Query: 459 RRLILDTSADSEKEENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSYRGSKG 518
RRL+ S E E+ MV+ ++ V + + +KL M +DI +S ++ F+ S S
Sbjct: 439 RRLLQQRSL-VEIEKWMVQMIKKV-LGTFFTSKLEIMLRDISLSSEMYQAFQHSTINSIE 496
Query: 519 SIGDSINIKILNAGAWARGSERVT---VSLPLELEDYIPEVEDFYKKKHSGRKLQWYHHM 575
+ S ++L +W S +SLP + + E +Y K+ R L+W HH+
Sbjct: 497 YL--SFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAHHL 554
Query: 576 SNGTITFSNEVGKYDLDVTTFQMAVLF 602
S I G Y++ + + V+F
Sbjct: 555 SVIEIGCQFNSGYYEISFSVYA-GVIF 580
Score = 51 (23.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/123 (21%), Positives = 48/123 (39%)
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQ- 199
+ LD + I L + + ++ RN + DS+ + + + + D
Sbjct: 135 MCLDLFRIEILQKCSSSLISALISDIERIRNLGSVDSEHT-SLWKVLIGMMETLHDNRDS 193
Query: 200 IYREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQ 259
+ FE I+ATE +Y KA + +ES K + E L + +L S +
Sbjct: 194 FFLTDFEPVLISATEEYYN-KAIDIELLTPIESLEKIRKLRQFESMLDS-SFLNVDSHNK 251
Query: 260 LLT 262
L T
Sbjct: 252 LKT 254
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 137 (53.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 59/212 (27%), Positives = 103/212 (48%)
Query: 406 LLANYCDMLLRKTPLSKRLTADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLILDT 465
LL Y + L+ K S+ DE L+ ++ ++++ ++ F+ + L R I +T
Sbjct: 330 LLVTYANELMTKRQESEEAIIDE----LKRIVKCVEFLSDEYKFIDMYLKALRIRQINET 385
Query: 466 SADSEKEENMVEWLRDVGMPADYVNKLARM-FQDIKVSQDLNYQFKQSYRGSKG-SIGDS 523
S S+ E+++ L + M A++V + + +D+ + L +F Q + SKG +G
Sbjct: 386 ST-SDGVESIMYSLLNKKM-ANFVTRCIYVQLRDVDKLRTLKKEF-QDHLNSKGIKLGFD 442
Query: 524 INIKIL-NAGAWARGSERVTVSLPLELEDYIPEVEDFY--KKKHSGRKLQWYHHMSNGTI 580
K N G++ E ++LP EL+ E FY +K S +Q + +S+G I
Sbjct: 443 FRPKCFKNDGSF----ENFNLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEI 498
Query: 581 TFSNEVGKYDLDVTTFQMAVLFAWNERPLDRF 612
T Y L+V+T QMAVL +N +RF
Sbjct: 499 TCHLNQSVYILEVSTLQMAVLMLFNRH--ERF 528
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 43/201 (21%), Positives = 82/201 (40%)
Query: 58 DALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKS 117
D L + + N I + L + L+ Y++ W + C L L N+
Sbjct: 74 DCLMKRLKN-IAWVMENQLDDNKPIRLIAKYLEHWVPYQRSCEKL-----NLACYHFNR- 126
Query: 118 VSTSLTNNNNKQKISAEESTVRV--LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAF 175
N ++++ ++ T + L + SW + +F L +A++L+ S+ E +
Sbjct: 127 ------NWVERERLKGDKETYPIYRLAMISWKELVFEPSVTIL--AAIRLILSQMPRE-Y 177
Query: 176 DSQL---VIGVRESYVNLCSNPEDKLQIYREHFEKAYIAATESFYTVKAAEFLQNNGVES 232
+ L V V +S V L +N DK Q + + + + +T K +F ++ +
Sbjct: 178 NKSLEYQVYQVLQSIVELYAN--DKYQ------DVSLPSRIDKIFTEKVMDFYKSTTLHE 229
Query: 233 YMKYA---DAKLHEEELR-AC 249
+ K D K + LR AC
Sbjct: 230 FQKIVVSNDYKDFKHFLRYAC 250
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/240 (21%), Positives = 104/240 (43%)
Query: 34 EWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIRHAQQRVLAHEEDQALLKAYIQEWS 93
EW N+ + E G S+ A ++IM + A R+ A++ Q L Y +
Sbjct: 12 EWSNIQQGFTKLIRMIE-GESE--PAFNQEIMMMMHTATYRICAYKNPQQLYDKYRELIE 68
Query: 94 KFLAQCSYLPTPFRQLETSLVNK-----SVSTSLTNNNNKQKISAEES--------TVRV 140
+ Q + LP+ + + ++ + + L +++ + ++S ++R
Sbjct: 69 NYAIQ-TVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLRE 127
Query: 141 LMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
+ L+ + ++ +++ ++ + L+ ER GE D +LV V + +V N L+
Sbjct: 128 VGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVE---NGMGTLKK 184
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQL 260
Y E FE+ + T S+Y+ KA+ ++Q Y L E R YL ++ +L
Sbjct: 185 YEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHPTTEPKL 244
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 103 (41.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 54/252 (21%), Positives = 111/252 (44%)
Query: 302 RIKDGITPM---LQD-LEAHIVNAGLADMIASADIITQDSEKYVERLLELFNQFSKLVKD 357
R+K+ I L D + + I N+G S T K++E +L+ +Q ++ K+
Sbjct: 347 RLKEAIVAQGNSLPDYVRSSIENSGKKQSNNSPAFAT----KWIETILKYRDQLMQVWKN 402
Query: 358 AFKDDPRFLTARDKAYKNVVNDTTVFKLELPTKQCTGIKTLPES-KCPELLANYCDMLLR 416
+F ++ A ++ +N + K P S PELL+ Y D ++
Sbjct: 403 SFDENLMIEQTFTFAMRDFINGSN--------------KRGPASVNAPELLSVYMDYFIK 448
Query: 417 K----TPLSKRLT---ADEIESKLRNVLLVLKYVQNKDVFMRFHKAHLTRRLI---LDTS 466
+ + +K ++ D+ E + N + L+++++KD F + H +R + S
Sbjct: 449 QLTKGSSSNKDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGNS 508
Query: 467 ADSEKE-ENMVEWLRDVGMPADYVNKLARMFQDIKVSQDLNYQFKQSY-RGSKGSIGDSI 524
S K+ E ++ M ++K+ +M +D++ S+D +K+ + SK + +
Sbjct: 509 PSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRDVRSSKDTTNDWKRYLNKQSKSTDLVEM 568
Query: 525 NIKILNAGAWAR 536
+KI N W +
Sbjct: 569 ELKICNVTDWPK 580
Score = 85 (35.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/260 (19%), Positives = 111/260 (42%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCLWDEKGPSKIVDALKEDIMNFIR 69
F+ W S+ + +Q + VS ++ L+ +V+ L K K+ D + I +
Sbjct: 36 FDKNW-SVLSSAISQIQNKNVSNLSYEQLYRKAYVLVL--RKFGGKLYDNVANVIKTHLL 92
Query: 70 HAQQRVLAHEEDQAL-LKAYIQEWSKFLAQCSYLPTPFRQLETSLVNKSVSTSLTNNNNK 128
++++L+ + L +++ +QEWS+ L ++ L NK V +
Sbjct: 93 TRREKLLSVSANHDLFMQSILQEWSEHLQAMKFISDVLMYL-----NK-VYVA-----EH 141
Query: 129 QKISAEESTVRVLMLDSWNQSIFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYV 188
+K+ + ++ L D + +++ ++ + + + R G S + I + +
Sbjct: 142 KKLLIYDLGIQ-LFKDYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVITSSMYITKIINMM 200
Query: 189 NLCSNPEDKLQI------YREHFEKAYIAATE-SFYTVKAAEFLQNNGVESYMKYADAKL 241
L P I Y+ FE ++ ++E S Y + + EF+ +N Y++ +
Sbjct: 201 ELLVEPSGSSDILFGDSYYQIKFEPKFLKSSEESLYNL-SQEFVSHNLGTKYLQLTTQFI 259
Query: 242 HEEELRACKYLESSSSVQLL 261
+E+ R YL S+ +L+
Sbjct: 260 KDEDNRVRFYLPPSTYPKLV 279
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 58/224 (25%), Positives = 92/224 (41%)
Query: 150 IFNDIKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQIYREHFEKAY 209
++ +++ ++ + L+ ER GE D LV V + YV N L+ Y E FE
Sbjct: 146 VYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVE---NGMGTLEKYEEDFESFM 202
Query: 210 IAATESFYTVKAAEFLQNNGVESYMKYADAKLHEEELRACKYLESSSSVQLLTDCCVTVL 269
+ T S+Y+ KA+ + + + YM + L E R YL S + +L+ +L
Sbjct: 203 LQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHSITEPKLVEKIQNELL 262
Query: 270 VSSFKNTILAECPKMIXXXXXXXXXXXXXXXDRIKDGITPML---QDL-EAHIVNAGLAD 325
V KN + E R+ I L DL + HI G A
Sbjct: 263 VMVTKNRLENE-HSGFSALLRDDKKNDLSRIYRLYLPIPKRLGRVADLFKKHITEEGNA- 320
Query: 326 MIASADIITQDSEKYVERLLELFNQFSKLVKDAFKDDPRFLTAR 369
+I AD T + + L+EL N+F V + F++ F R
Sbjct: 321 LIKQADDKTTN-----QLLIELHNKFIVYVIECFQNHTLFHKVR 359
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 29/104 (27%), Positives = 55/104 (52%)
Query: 143 LDSWNQSIFND--IKQRLQDSAMKLVQSERNGEAFDSQLVIGVRESYVNLCSNPEDKLQI 200
L+ + I +D ++ + D + L++ ERNGEA D L+ S +++ S+ LQI
Sbjct: 133 LELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLL----RSLLSMLSD----LQI 184
Query: 201 YREHFEKAYIAATESFYTVKAAEFLQNNGVESYMKYADAKLHEE 244
Y++ FE+ ++ T Y + + +Q V Y+ + + +L EE
Sbjct: 185 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEE 228
>UNIPROTKB|F1RUR6 [details] [associations]
symbol:F1RUR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:CU914378 Ensembl:ENSSSCT00000012152 Uniprot:F1RUR6
Length = 106
Score = 95 (38.5 bits), Expect = 0.00089, P = 0.00089
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 10 FEDKWPSMRPIVLKLLQQEPVSQNEWQNLFYAVHVVCL-WDEKGPSKIVDALKEDIMNFI 68
F++ W + + ++ E V + W + F ++ +C+ + E ++ K + N +
Sbjct: 10 FDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHV 69
Query: 69 RHAQQRVLAHEEDQALLKAYIQEWSKFLAQCSYLPTPFR 107
RH +RVL EE +L Y + W ++ Y+ +R
Sbjct: 70 RHLHKRVLESEEQ--VLVMYHRYWEEYSKGADYMDCLYR 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 615 600 0.00085 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 107
No. of states in DFA: 622 (66 KB)
Total size of DFA: 347 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 58.56u 0.10s 58.66t Elapsed: 00:01:06
Total cpu time: 58.62u 0.10s 58.72t Elapsed: 00:01:08
Start: Thu Aug 15 13:31:26 2013 End: Thu Aug 15 13:32:34 2013
WARNINGS ISSUED: 1