BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14851
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2
Length = 2839
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%), Gaps = 1/107 (0%)
Query: 52 LCIPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLPNLV 111
LCIPANNT+FI SIS+TLA NEPHLTLEFLEECISGF +S+I LKHLCLEYMTPWL NLV
Sbjct: 1898 LCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKHLCLEYMTPWLSNLV 1957
Query: 112 KFCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSIGQV 158
+FCK +D+ KR QRV I+ KLI +TI E +MYPSIQAKIWGS+GQ+
Sbjct: 1958 RFCKHNDDAKR-QRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQI 2003
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 10 VCMRDIPDCDWLNTWTSLAKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETL 69
CMRDIP C WL+ WT LA+ FAF YNP+LQPRAL+V+GCI + IK I L
Sbjct: 2215 ACMRDIPTCKWLDQWTELAQRFAFQYNPSLQPRALVVFGCISKRVSHGQ---IKQIIRIL 2271
Query: 70 AKNEPHLTLEFLEECISG 87
+K LE C+ G
Sbjct: 2272 SKA--------LESCLKG 2281
>sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1
Length = 2841
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%), Gaps = 1/107 (0%)
Query: 52 LCIPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLPNLV 111
LCIPANNT+FI SIS+TLA NEPHLTLEFLEECISGF +S+I LKHLCLEYMTPWL NLV
Sbjct: 1900 LCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKHLCLEYMTPWLSNLV 1959
Query: 112 KFCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSIGQV 158
+FCK +D+ KR QRV I+ KLI +TI E +MYPSIQAKIWGS+GQ+
Sbjct: 1960 RFCKHNDDAKR-QRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQI 2005
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 10 VCMRDIPDCDWLNTWTSLAKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETL 69
CMRDIP C WL+ WT LA+ FAF YNP+LQPRAL+V+GCI + IK I L
Sbjct: 2217 ACMRDIPTCKWLDQWTELAQRFAFQYNPSLQPRALVVFGCISKRVSHGQ---IKQIIRIL 2273
Query: 70 AKNEPHLTLEFLEECISG 87
+K LE C+ G
Sbjct: 2274 SKA--------LESCLKG 2283
>sp|P97526|NF1_RAT Neurofibromin OS=Rattus norvegicus GN=Nf1 PE=1 SV=1
Length = 2820
Score = 173 bits (439), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 93/107 (86%), Gaps = 1/107 (0%)
Query: 52 LCIPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLPNLV 111
LCIPANNT+FI SIS+TLA NEPHLTLEFLEECISGF +S+I LKHLCLEYMTPWL NLV
Sbjct: 1879 LCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKHLCLEYMTPWLSNLV 1938
Query: 112 KFCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSIGQV 158
+FCK +D+ KR QRV I+ KLI +TI E +MYPSIQAKIWGS+GQ+
Sbjct: 1939 RFCKHNDDAKR-QRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQI 1984
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 10 VCMRDIPDCDWLNTWTSLAKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETL 69
CMRDIP C WL+ WT LA+ FAF YNP+LQPRAL+V+GCI + IK I L
Sbjct: 2196 ACMRDIPTCKWLDQWTELAQRFAFQYNPSLQPRALVVFGCISKRVSHGQ---IKQIIRIL 2252
Query: 70 AKNEPHLTLEFLEECISG 87
+K LE C+ G
Sbjct: 2253 SKA--------LESCLKG 2262
>sp|P35608|NF1_CHICK Neurofibromin (Fragment) OS=Gallus gallus GN=NF1 PE=2 SV=1
Length = 270
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 10 VCMRDIPDCDWLNTWTSLAKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETL 69
CMRDIP C WL+ WT LA+ FAF YNP+LQPRAL+V+GCI + IK I L
Sbjct: 90 ACMRDIPTCKWLDQWTELAQKFAFQYNPSLQPRALVVFGCISKRVSHGQ---IKQIIRIL 146
Query: 70 AKNEPHLTLEFLEECISG 87
+K LE C+ G
Sbjct: 147 SKG--------LESCLKG 156
>sp|P18963|IRA1_YEAST Inhibitory regulator protein IRA1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=IRA1 PE=1 SV=2
Length = 3092
Score = 37.7 bits (86), Expect = 0.067, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 54 IPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQSTIVLKHL--CLEYMTPWLPNLV 111
+P + T F+ I + +++ LT + + G + I +H+ + ++ W+PNL
Sbjct: 2380 VPDDTTTFLALIFKAFSESSTELTPYIWKYMLDGLENDVIPQEHIPTVVCSLSYWVPNLY 2439
Query: 112 KFCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIW 152
+ +++ + + + I+ LI LT+KE + +IW
Sbjct: 2440 EHVYLANDEEGPEAISRIIYSLIRLTVKEPNFTTAYLQQIW 2480
>sp|Q13118|KLF10_HUMAN Krueppel-like factor 10 OS=Homo sapiens GN=KLF10 PE=1 SV=1
Length = 480
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 32 AFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETLAKNEPHLTLEFLEE---CISGF 88
AFC P P L PA +T+ KS+S+T +PH+ F EE +S
Sbjct: 89 AFCLTPPYSPSDFEPSQVSNLMAPAPSTVHFKSLSDTA---KPHIAAPFKEEEKSPVSAP 145
Query: 89 K----QSTIVLKH 97
K Q+T V++H
Sbjct: 146 KLPKAQATSVIRH 158
>sp|Q9H497|TOR3A_HUMAN Torsin-3A OS=Homo sapiens GN=TOR3A PE=1 SV=1
Length = 397
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 68 TLAKNEPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLP---NLVKFCKQ----SDEG 120
T+ EPHL E +E +GF S +V ++L ++Y P+LP V+ C + S E
Sbjct: 298 TMEHLEPHLQAEIVETIDNGFGHSRLVKENL-IDYFIPFLPLEYRHVRLCARDAFLSQEL 356
Query: 121 KRQQRVLGIMTKLIELTIKEVEMYPS 146
++ L + +++ KE +++ S
Sbjct: 357 LYKEETLDEIAQMMVYVPKEEQLFSS 382
>sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens GN=FRY PE=1 SV=1
Length = 3013
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 28 AKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETLAKNEPHLTLEFLEECISG 87
AK F + A Q I+YG +P ++ + +S LA+ P LTL E
Sbjct: 1286 AKLFVYSKKVAEQRPGSILYGTHG-PLPPLYSVSLALLSCELARMYPELTLPLFSEVSQR 1344
Query: 88 FKQSTIVLKHLCLEYMTPWLPNL 110
F + + + L Y+ PWL N+
Sbjct: 1345 FPTTHPNGRQIMLTYLLPWLHNI 1367
>sp|Q54QY9|ABCH4_DICDI ABC transporter H family member 4 OS=Dictyostelium discoideum
GN=abcH4 PE=3 SV=1
Length = 882
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 123 QQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSIGQVHLIRSACQVYLIVCVLIRYQVDLI 182
Q+ LG+ LIE + + + ++ ++ W SI L A +V++ V+ R ++D
Sbjct: 256 QETQLGLFDNLIEKELSNTQSFSTLISRTWRSIHNRSLFEFAAEVWVAHKVMDRQKID-- 313
Query: 183 GRPDQVYLSGLRD 195
+Q+Y + L D
Sbjct: 314 ---NQLYRTTLLD 323
>sp|Q6ZQ38|CAND1_MOUSE Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus
GN=Cand1 PE=2 SV=2
Length = 1230
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 38 ALQPRALIVYGCICLCIPANNTIFIKSISE---TLAKNEPHLTLEFLEECISGFKQSTIV 94
A++ R +I G L + N +F+ I L+KN+ T +CI+ +
Sbjct: 190 AVRKRTIIALGH--LVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-- 245
Query: 95 LKHLCLEYMTPWLPNLVKFCKQSDEGKRQ 123
H EY+ +P +VKFC D+ R+
Sbjct: 246 -GHRIGEYLEKIIPLVVKFCNVDDDELRE 273
>sp|Q3UHQ6|DOP2_MOUSE Protein dopey-2 OS=Mus musculus GN=Dopey2 PE=2 SV=3
Length = 2295
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 78/212 (36%), Gaps = 39/212 (18%)
Query: 23 TWTSLAKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETLAKNEPHLTLEFLE 82
T +L K+ P R L + + + N FI+++S T L +
Sbjct: 1218 TVEALFKHILLYLQPYDSQRVLYAFSVLEAVLKTNPKEFIEAVSRTGIDTSSTAHLNLIS 1277
Query: 83 ECISGFKQSTI-----------------------VLKHLCLEYMTPWLPNLVKFCKQSDE 119
++ +++ I +L +LCL ++ + P +K C +
Sbjct: 1278 NLLARHQEALIGQSFYGKLQTQAPNVCPHSLLIELLTYLCLSFLRSYYPCYLKVCHRDIL 1337
Query: 120 GKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSIGQVHLIRSACQVYLIVCVLIRYQV 179
G R +V + LI +T + V M S + K + +H + C+V V
Sbjct: 1338 GNRDVQVKSVEV-LIRITAQLVSMAKSAEGK---NTEFIHSLLQRCKVQEFV-------- 1385
Query: 180 DLIGRPDQVYLSGLRDGLPGIGTRDQEPRLIT 211
L+ +Y S R GL T D+ RL+
Sbjct: 1386 -LLSLSASMYTSQKRYGL---ATADRGGRLLA 1413
>sp|Q86VP6|CAND1_HUMAN Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens
GN=CAND1 PE=1 SV=2
Length = 1230
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 38 ALQPRALIVYGCICLCIPANNTIFIKSISE---TLAKNEPHLTLEFLEECISGFKQSTIV 94
A++ R +I G L + N +F+ I L+KN+ T +CI+ +
Sbjct: 190 AVRKRTIIALGH--LVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-- 245
Query: 95 LKHLCLEYMTPWLPNLVKFCKQSDEGKRQ 123
H EY+ +P +VKFC D+ R+
Sbjct: 246 -GHRIGEYLEKIIPLVVKFCNVDDDELRE 273
>sp|A7MBJ5|CAND1_BOVIN Cullin-associated NEDD8-dissociated protein 1 OS=Bos taurus
GN=CAND1 PE=2 SV=1
Length = 1230
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 38 ALQPRALIVYGCICLCIPANNTIFIKSISE---TLAKNEPHLTLEFLEECISGFKQSTIV 94
A++ R +I G L + N +F+ I L+KN+ T +CI+ +
Sbjct: 190 AVRKRTIIALGH--LVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-- 245
Query: 95 LKHLCLEYMTPWLPNLVKFCKQSDEGKRQ 123
H EY+ +P +VKFC D+ R+
Sbjct: 246 -GHRIGEYLEKIIPLVVKFCNVDDDELRE 273
>sp|P97536|CAND1_RAT Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus
GN=Cand1 PE=1 SV=1
Length = 1230
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 38 ALQPRALIVYGCICLCIPANNTIFIKSISE---TLAKNEPHLTLEFLEECISGFKQSTIV 94
A++ R +I G L + N +F+ I L+KN+ T +CI+ +
Sbjct: 190 AVRKRTIIALGH--LVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-- 245
Query: 95 LKHLCLEYMTPWLPNLVKFCKQSDEGKRQ 123
H EY+ +P +VKFC D+ R+
Sbjct: 246 -GHRIGEYLEKIIPLVVKFCNVDDDELRE 273
>sp|Q5R6L5|CAND1_PONAB Cullin-associated NEDD8-dissociated protein 1 OS=Pongo abelii
GN=CAND1 PE=2 SV=1
Length = 1230
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 38 ALQPRALIVYGCICLCIPANNTIF---IKSISETLAKNEPHLTLEFLEECISGFKQSTIV 94
A++ R +I G L + N +F I+ + L+KN+ T +CI+ +
Sbjct: 190 AVRKRTIIALGH--LVMSCGNIVFVGLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-- 245
Query: 95 LKHLCLEYMTPWLPNLVKFCKQSDEGKRQ 123
H EY+ +P +VKFC D+ R+
Sbjct: 246 -GHRIGEYLEKIIPLVVKFCNVDDDELRE 273
>sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1
SV=5
Length = 2078
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 134 IELTIKEVEMYPSIQAKIWGSIGQVHLIRSACQVYLIVCVL 174
+ LT+K+ E+ P + + G I +HL+ S QV+L++ +L
Sbjct: 294 LSLTLKQNEVLPGAKLDVDGQIDSIHLLLSPRQVHLLLDML 334
>sp|Q9ER39|TOR1A_MOUSE Torsin-1A OS=Mus musculus GN=Tor1a PE=1 SV=1
Length = 333
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 73 EPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLPNLVKFCKQSDEGKRQQRVLGIMTK 132
EP L + SGF S+++ ++L ++Y P+LP K K + Q R +
Sbjct: 238 EPALAVSVFNNKNSGFWHSSLIDRNL-IDYFVPFLPLEYKHLKMCIRVEMQSRGYEVDED 296
Query: 133 LIELTIKEVEMYPSIQAKIWGSIG 156
+I +E+ +P + K++ G
Sbjct: 297 IISKVAEEMTFFPK-EEKVFSDKG 319
>sp|E9Q8I9|FRY_MOUSE Protein furry homolog OS=Mus musculus GN=Fry PE=1 SV=1
Length = 3020
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 28 AKNFAFCYNPALQPRALIVYGCICLCIPANNTIFIKSISETLAKNEPHLTLEFLEECISG 87
AK F A Q I+YG +P ++ + +S LA+ P LTL E
Sbjct: 1286 AKLFVHSKKVAEQRPGSILYGTHG-PLPPLYSVSLALLSCELARMYPELTLPLFSEVSQR 1344
Query: 88 FKQSTIVLKHLCLEYMTPWLPNL 110
F + + + L Y+ PWL N+
Sbjct: 1345 FPTTHPNGRQIMLTYLLPWLHNI 1367
>sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1
Length = 942
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 109 NLVKFCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQ 148
NL K+ K DE QRV+ +T +I + + E+YP I+
Sbjct: 668 NLTKYLKMEDEYLPWQRVISAVTYIISMFEDDKELYPMIE 707
>sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2
Length = 3013
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 54 IPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQSTIVLKHLCLEYMTPWLPNL 110
+P ++ +SE LA+ P LTL E + + + + L Y+ PW+ N+
Sbjct: 1260 LPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNI 1316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,045,921
Number of Sequences: 539616
Number of extensions: 3200104
Number of successful extensions: 7457
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7437
Number of HSP's gapped (non-prelim): 32
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)