RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy14851
         (217 letters)



>gnl|CDD|222610 pfam14228, MOR2-PAG1_mid, Cell morphogenesis central region.  This
           family is the conserved central region of proteins that
           are involved in cell morphogenesis.
          Length = 1120

 Score = 35.7 bits (82), Expect = 0.015
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 54  IPANNTIFIKSISETLAKNEPHLTLEFLEECIS-GFKQSTIVLKHLCLEYMTPWLPNLVK 112
           +P +   F   +S  LAK+ P L+    EE +        I+ +H  L  M PW+ NL  
Sbjct: 594 LPDSYQQFQYKLSAKLAKDHPELSEALCEEIMQRQLDAVDIIAQHQVLTCMAPWIENL-N 652

Query: 113 FCKQSDEGKRQQRVLGIMTKLIELTIKEVEMYPSIQAKIWGSI 155
           F +  + G  ++    ++  L  +T +  + +P    K+W ++
Sbjct: 653 FVQLKESGWSER----LLKSLYYVTWRHGDQFPDEIEKLWSTV 691


>gnl|CDD|235326 PRK04976, torD, chaperone protein TorD; Validated.
          Length = 202

 Score = 28.4 bits (64), Expect = 2.2
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 10/56 (17%)

Query: 72  NEP--HLT--LEFLE--ECISGFKQSTIVLKHLCLEYMTPWLPNLVKFCKQSDEGK 121
           NEP  HL   LE L      SG +Q  + ++      +  WLP     C Q D   
Sbjct: 129 NEPADHLAVYLELLSHLIFSSGERQQLLFIQT----ALLSWLPEFAAKCTQYDSFG 180


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.325    0.141    0.450 

Gapped
Lambda     K      H
   0.267   0.0561    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 10,941,977
Number of extensions: 994998
Number of successful extensions: 825
Number of sequences better than 10.0: 1
Number of HSP's gapped: 825
Number of HSP's successfully gapped: 8
Length of query: 217
Length of database: 10,937,602
Length adjustment: 93
Effective length of query: 124
Effective length of database: 6,812,680
Effective search space: 844772320
Effective search space used: 844772320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.1 bits)