Query psy14856
Match_columns 734
No_of_seqs 421 out of 755
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 22:29:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14856.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14856hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1971|consensus 100.0 3.3E-84 7.2E-89 691.1 12.3 413 156-627 1-415 (415)
2 KOG4179|consensus 100.0 1.6E-37 3.5E-42 328.0 9.7 242 290-550 2-270 (568)
3 PRK05467 Fe(II)-dependent oxyg 99.7 1.6E-17 3.4E-22 170.6 15.2 154 563-732 5-176 (226)
4 cd06437 CESA_CaSu_A2 Cellulose 99.7 5.6E-16 1.2E-20 158.7 19.0 200 291-507 1-210 (232)
5 smart00702 P4Hc Prolyl 4-hydro 99.7 2.9E-16 6.2E-21 155.9 13.9 164 559-732 1-177 (178)
6 cd06427 CESA_like_2 CESA_like_ 99.7 5.3E-16 1.1E-20 160.3 16.1 200 291-508 1-210 (241)
7 TIGR03469 HonB hopene-associat 99.7 9.8E-16 2.1E-20 170.1 19.0 202 288-503 37-255 (384)
8 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.8E-15 3.9E-20 161.7 19.4 205 294-512 1-227 (299)
9 cd02520 Glucosylceramide_synth 99.7 3.7E-15 7.9E-20 149.2 17.3 164 291-504 1-171 (196)
10 PRK11204 N-glycosyltransferase 99.6 6E-15 1.3E-19 165.0 20.9 206 288-515 51-264 (420)
11 PRK14583 hmsR N-glycosyltransf 99.6 5.9E-15 1.3E-19 166.9 20.6 209 289-516 73-286 (444)
12 TIGR03472 HpnI hopanoid biosyn 99.6 3.9E-15 8.4E-20 164.6 17.0 197 289-503 39-246 (373)
13 KOG1971|consensus 99.6 3.2E-16 7E-21 169.4 7.6 189 536-732 124-355 (415)
14 TIGR03111 glyc2_xrt_Gpos1 puta 99.6 7E-15 1.5E-19 166.1 17.2 212 288-515 46-271 (439)
15 cd06435 CESA_NdvC_like NdvC_li 99.6 2.1E-14 4.6E-19 146.8 18.4 201 294-515 1-213 (236)
16 COG1216 Predicted glycosyltran 99.6 1.6E-14 3.5E-19 155.3 18.0 211 290-515 2-225 (305)
17 PF13641 Glyco_tranf_2_3: Glyc 99.6 5.8E-15 1.2E-19 150.1 13.7 200 291-509 1-209 (228)
18 cd06439 CESA_like_1 CESA_like_ 99.6 3.4E-14 7.4E-19 146.7 19.1 192 288-507 26-226 (251)
19 cd06421 CESA_CelA_like CESA_Ce 99.6 1.5E-14 3.3E-19 146.9 16.2 196 291-507 1-208 (234)
20 PRK10073 putative glycosyl tra 99.6 6.7E-14 1.5E-18 152.4 20.1 208 289-515 4-221 (328)
21 cd04185 GT_2_like_b Subfamily 99.6 6.6E-14 1.4E-18 139.8 17.8 169 295-513 1-176 (202)
22 cd04195 GT2_AmsE_like GT2_AmsE 99.6 2.2E-14 4.7E-19 142.8 13.8 187 294-506 1-197 (201)
23 COG1215 Glycosyltransferases, 99.6 7.6E-14 1.6E-18 156.0 19.2 209 290-515 53-269 (439)
24 cd04184 GT2_RfbC_Mx_like Myxoc 99.5 1.1E-13 2.5E-18 137.5 15.9 190 291-508 1-199 (202)
25 PF03452 Anp1: Anp1; InterPro 99.5 8.4E-14 1.8E-18 145.7 15.3 128 288-415 22-179 (269)
26 PLN02726 dolichyl-phosphate be 99.5 3.8E-13 8.3E-18 139.4 18.6 201 288-510 6-218 (243)
27 PRK14716 bacteriophage N4 adso 99.5 2.9E-13 6.2E-18 154.6 19.1 203 288-505 63-284 (504)
28 cd06913 beta3GnTL1_like Beta 1 99.5 9.7E-13 2.1E-17 133.5 18.7 201 295-515 1-214 (219)
29 cd06442 DPM1_like DPM1_like re 99.5 5.3E-13 1.2E-17 134.9 16.3 195 295-514 1-207 (224)
30 PRK11498 bcsA cellulose syntha 99.5 6.3E-13 1.4E-17 159.0 18.8 203 288-516 257-474 (852)
31 cd02522 GT_2_like_a GT_2_like_ 99.5 8.7E-13 1.9E-17 133.1 16.4 174 293-501 1-178 (221)
32 cd04196 GT_2_like_d Subfamily 99.5 1.6E-12 3.5E-17 129.8 17.6 194 294-512 1-205 (214)
33 TIGR03030 CelA cellulose synth 99.5 1.2E-12 2.6E-17 156.1 19.1 204 288-515 128-362 (713)
34 cd02526 GT2_RfbF_like RfbF is 99.5 1.7E-12 3.7E-17 132.5 17.5 198 295-516 1-210 (237)
35 cd04192 GT_2_like_e Subfamily 99.5 2.3E-12 4.9E-17 130.1 17.9 186 295-501 1-200 (229)
36 cd02525 Succinoglycan_BP_ExoA 99.4 1.9E-12 4.2E-17 132.3 16.8 199 292-511 1-209 (249)
37 cd04186 GT_2_like_c Subfamily 99.4 2.6E-12 5.6E-17 122.5 16.3 159 295-509 1-164 (166)
38 cd06433 GT_2_WfgS_like WfgS an 99.4 1.9E-12 4.1E-17 127.2 15.2 188 294-513 1-197 (202)
39 cd06438 EpsO_like EpsO protein 99.4 6.1E-13 1.3E-17 131.6 10.6 174 295-488 1-183 (183)
40 TIGR01556 rhamnosyltran L-rham 99.4 9E-12 1.9E-16 131.8 17.2 193 299-515 2-206 (281)
41 PRK10018 putative glycosyl tra 99.4 1.9E-11 4E-16 130.5 19.6 202 289-514 3-210 (279)
42 cd06434 GT2_HAS Hyaluronan syn 99.4 5.5E-12 1.2E-16 128.6 14.5 194 292-506 1-209 (235)
43 cd06420 GT2_Chondriotin_Pol_N 99.4 3.2E-11 6.9E-16 117.9 18.6 103 295-403 1-103 (182)
44 cd04188 DPG_synthase DPG_synth 99.4 1.1E-11 2.3E-16 125.2 14.9 189 295-503 1-201 (211)
45 PRK11234 nfrB bacteriophage N4 99.3 1.3E-11 2.7E-16 146.6 17.2 200 287-503 59-279 (727)
46 PLN00052 prolyl 4-hydroxylase; 99.3 2E-11 4.3E-16 131.3 13.0 157 558-732 53-250 (310)
47 cd04191 Glucan_BSP_ModH Glucan 99.3 2E-10 4.4E-15 120.9 18.5 210 293-515 1-236 (254)
48 PRK10063 putative glycosyl tra 99.3 6.2E-11 1.4E-15 124.2 14.5 186 291-511 1-197 (248)
49 PF00535 Glycos_transf_2: Glyc 99.2 3.9E-11 8.4E-16 113.6 10.0 100 294-402 1-101 (169)
50 cd04179 DPM_DPG-synthase_like 99.2 6.6E-11 1.4E-15 115.8 10.9 101 295-403 1-103 (185)
51 cd06423 CESA_like CESA_like is 99.2 5E-11 1.1E-15 112.8 8.9 100 295-401 1-100 (180)
52 PRK15489 nfrB bacteriophage N4 99.2 4.1E-10 8.9E-15 132.6 18.0 201 288-501 68-285 (703)
53 PTZ00260 dolichyl-phosphate be 99.2 8.7E-10 1.9E-14 120.5 19.5 201 288-503 67-285 (333)
54 cd06436 GlcNAc-1-P_transferase 99.2 2.1E-10 4.6E-15 114.7 13.0 101 295-402 1-112 (191)
55 PHA02869 C4L/C10L-like gene fa 99.2 1.4E-10 3E-15 125.6 11.8 159 560-730 10-187 (418)
56 cd04190 Chitin_synth_C C-termi 99.2 1.3E-10 2.9E-15 120.9 11.0 168 295-501 1-211 (244)
57 PF10111 Glyco_tranf_2_2: Glyc 99.1 1.4E-09 2.9E-14 116.0 17.9 197 294-507 1-219 (281)
58 PHA02813 hypothetical protein; 99.1 6.8E-10 1.5E-14 118.8 11.6 153 561-730 7-178 (354)
59 COG0463 WcaA Glycosyltransfera 99.0 3.8E-09 8.2E-14 100.0 12.0 105 290-404 2-107 (291)
60 PRK05454 glucosyltransferase M 98.9 3.9E-08 8.5E-13 116.6 19.5 215 288-516 121-362 (691)
61 cd02511 Beta4Glucosyltransfera 98.9 8.3E-09 1.8E-13 106.2 12.0 93 292-402 1-94 (229)
62 PRK10714 undecaprenyl phosphat 98.9 1.2E-08 2.6E-13 111.3 13.7 113 290-410 5-124 (325)
63 cd04187 DPM1_like_bac Bacteria 98.9 8.5E-09 1.9E-13 101.3 11.4 108 295-411 1-115 (181)
64 COG3128 PiuC Uncharacterized i 98.9 1.3E-08 2.9E-13 99.6 10.3 157 563-732 7-179 (229)
65 PRK13915 putative glucosyl-3-p 98.8 1.2E-08 2.5E-13 110.4 10.4 106 289-402 29-139 (306)
66 cd00761 Glyco_tranf_GTA_type G 98.8 1.3E-07 2.8E-12 87.2 14.8 149 295-500 1-155 (156)
67 PF13640 2OG-FeII_Oxy_3: 2OG-F 98.7 9.9E-09 2.1E-13 92.1 4.0 81 648-732 2-99 (100)
68 KOG2978|consensus 98.2 2.5E-05 5.4E-10 77.4 13.6 196 291-503 3-206 (238)
69 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.1 3E-06 6.6E-11 75.7 4.3 83 645-734 2-98 (98)
70 PF13712 Glyco_tranf_2_5: Glyc 97.8 0.00019 4E-09 74.2 11.8 172 293-503 1-191 (217)
71 PF13704 Glyco_tranf_2_4: Glyc 97.7 0.00016 3.6E-09 64.3 7.9 89 300-400 1-96 (97)
72 KOG1591|consensus 97.6 0.00049 1.1E-08 73.8 11.9 84 643-732 174-282 (289)
73 PF13506 Glyco_transf_21: Glyc 97.5 0.00064 1.4E-08 67.8 10.3 113 377-504 30-148 (175)
74 KOG3736|consensus 97.3 0.00041 8.9E-09 80.4 6.3 212 288-512 139-371 (578)
75 PF09859 Oxygenase-NA: Oxygena 97.2 0.00088 1.9E-08 65.3 7.0 80 647-728 64-166 (173)
76 KOG2547|consensus 97.2 0.002 4.4E-08 70.1 10.3 194 288-503 82-290 (431)
77 PF13632 Glyco_trans_2_3: Glyc 97.1 0.0019 4E-08 64.2 8.5 112 381-505 1-119 (193)
78 PF03142 Chitin_synth_2: Chiti 97.1 0.017 3.8E-07 66.8 17.2 54 290-343 24-86 (527)
79 KOG2977|consensus 97.1 0.0021 4.6E-08 67.8 8.7 94 292-390 68-169 (323)
80 cd02514 GT13_GLCNAC-TI GT13_GL 96.8 0.011 2.4E-07 64.9 11.9 98 293-401 2-119 (334)
81 PF05679 CHGN: Chondroitin N-a 96.7 0.05 1.1E-06 63.1 17.2 207 289-509 245-466 (499)
82 COG4092 Predicted glycosyltran 96.7 0.015 3.2E-07 61.0 11.0 187 291-494 2-215 (346)
83 TIGR02466 conserved hypothetic 96.5 0.048 1E-06 55.9 13.6 82 643-731 94-196 (201)
84 PF12851 Tet_JBP: Oxygenase do 96.0 0.015 3.2E-07 58.1 6.5 72 657-732 84-169 (171)
85 cd00899 b4GalT Beta-4-Galactos 96.0 0.065 1.4E-06 55.5 11.3 153 292-503 3-158 (219)
86 TIGR02408 ectoine_ThpD ectoine 95.9 0.11 2.3E-06 55.8 13.2 157 561-729 31-244 (277)
87 KOG3738|consensus 95.8 0.05 1.1E-06 59.9 9.9 202 289-511 122-348 (559)
88 PF13661 2OG-FeII_Oxy_4: 2OG-F 95.7 0.015 3.3E-07 49.2 4.7 47 644-692 10-65 (70)
89 COG3826 Uncharacterized protei 95.7 0.02 4.4E-07 56.7 5.9 85 647-733 126-234 (236)
90 PF05721 PhyH: Phytanoyl-CoA d 95.4 0.11 2.3E-06 51.4 10.2 157 561-726 7-210 (211)
91 cd04194 GT8_A4GalT_like A4GalT 95.4 0.091 2E-06 54.9 9.9 157 32-195 31-198 (248)
92 PF11735 CAP59_mtransfer: Cryp 95.3 0.33 7.2E-06 51.1 13.7 118 292-411 1-147 (241)
93 cd06430 GT8_like_2 GT8_like_2 95.2 0.14 2.9E-06 55.7 10.6 128 101-254 99-257 (304)
94 cd06431 GT8_LARGE_C LARGE cata 95.1 0.3 6.6E-06 52.5 13.1 159 32-195 31-207 (280)
95 PLN02893 Cellulose synthase-li 95.1 0.31 6.8E-06 58.4 14.2 150 348-505 262-468 (734)
96 KOG3737|consensus 94.4 0.1 2.2E-06 57.4 7.3 119 288-413 152-278 (603)
97 PF13759 2OG-FeII_Oxy_5: Putat 94.2 0.094 2E-06 47.4 5.5 78 647-731 2-100 (101)
98 TIGR01762 chlorin-enz chlorina 94.1 0.98 2.1E-05 48.8 14.2 153 561-730 17-244 (288)
99 PF03336 Pox_C4_C10: Poxvirus 93.9 0.14 3E-06 55.8 6.9 78 645-730 79-165 (339)
100 PF03407 Nucleotid_trans: Nucl 93.8 0.35 7.6E-06 49.2 9.6 97 82-196 54-155 (212)
101 KOG3588|consensus 93.2 3.7 8E-05 45.4 16.2 201 289-510 227-437 (494)
102 PLN03182 xyloglucan 6-xylosylt 92.5 0.85 1.8E-05 51.1 10.5 103 17-127 112-226 (429)
103 COG2943 MdoH Membrane glycosyl 92.3 1.1 2.3E-05 51.6 11.1 107 291-402 144-263 (736)
104 PF13733 Glyco_transf_7N: N-te 91.3 0.82 1.8E-05 43.9 7.7 79 291-394 47-127 (136)
105 cd06429 GT8_like_1 GT8_like_1 91.0 2.1 4.6E-05 45.6 11.3 115 32-171 30-163 (257)
106 PF01762 Galactosyl_T: Galacto 90.4 3 6.4E-05 42.0 11.4 161 319-499 19-191 (195)
107 PF09488 Osmo_MPGsynth: Mannos 88.6 3.2 7E-05 45.8 10.5 102 291-402 50-181 (381)
108 PF01501 Glyco_transf_8: Glyco 88.2 1 2.2E-05 46.1 6.2 90 101-194 101-203 (250)
109 cd02515 Glyco_transf_6 Glycosy 86.8 4.5 9.7E-05 43.2 10.0 99 290-394 33-139 (271)
110 cd02537 GT8_Glycogenin Glycoge 86.6 2.2 4.8E-05 44.6 7.7 76 100-196 91-170 (240)
111 cd00505 Glyco_transf_8 Members 85.7 4.4 9.6E-05 42.3 9.5 90 101-195 98-199 (246)
112 PLN03181 glycosyltransferase; 84.9 7 0.00015 44.1 10.7 90 30-127 126-227 (453)
113 TIGR03469 HonB hopene-associat 84.5 7.2 0.00016 43.6 11.0 100 31-131 39-166 (384)
114 cd04182 GT_2_like_f GT_2_like_ 83.0 12 0.00027 36.3 10.8 100 301-412 24-128 (186)
115 KOG3916|consensus 82.8 16 0.00036 40.2 12.2 168 265-505 139-309 (372)
116 PRK14503 mannosyl-3-phosphogly 82.7 7.9 0.00017 42.9 9.8 102 291-402 51-182 (393)
117 cd02523 PC_cytidylyltransferas 82.6 14 0.00031 37.6 11.5 100 290-407 19-120 (229)
118 PF12804 NTP_transf_3: MobA-li 82.5 8.4 0.00018 36.9 9.3 97 301-412 22-123 (160)
119 PF03071 GNT-I: GNT-I family; 82.4 3.1 6.8E-05 47.4 7.0 108 289-402 91-214 (434)
120 TIGR02460 osmo_MPGsynth mannos 81.9 8.9 0.00019 42.3 9.8 102 291-402 50-181 (381)
121 PRK15171 lipopolysaccharide 1, 81.3 14 0.00031 40.8 11.5 155 32-195 56-227 (334)
122 PRK15401 alpha-ketoglutarate-d 80.6 18 0.00039 37.5 11.2 160 555-729 14-209 (213)
123 PF11397 GlcNAc: Glycosyltrans 80.1 40 0.00087 37.5 14.5 212 292-513 1-265 (343)
124 PLN02365 2-oxoglutarate-depend 79.6 4.9 0.00011 43.6 7.1 83 646-734 150-249 (300)
125 PLN02904 oxidoreductase 79.5 12 0.00026 41.8 10.2 82 645-734 208-305 (357)
126 KOG2571|consensus 78.9 24 0.00051 43.5 13.0 112 376-503 438-571 (862)
127 PLN02189 cellulose synthase 77.8 4.8 0.0001 50.1 6.9 72 330-401 472-555 (1040)
128 PRK14356 glmU bifunctional N-a 77.7 16 0.00035 41.6 11.0 90 302-403 32-122 (456)
129 PF04666 Glyco_transf_54: N-Ac 77.2 16 0.00034 39.8 10.1 110 291-402 52-192 (297)
130 PLN03001 oxidoreductase, 2OG-F 76.9 6.7 0.00015 41.8 7.1 81 647-734 118-213 (262)
131 cd02540 GT2_GlmU_N_bac N-termi 76.6 24 0.00053 35.7 10.9 88 303-402 26-113 (229)
132 TIGR03472 HpnI hopanoid biosyn 76.4 15 0.00033 40.8 10.1 99 31-133 40-161 (373)
133 PF03414 Glyco_transf_6: Glyco 75.8 11 0.00024 41.5 8.4 98 291-394 99-204 (337)
134 PF06306 CgtA: Beta-1,4-N-acet 75.7 17 0.00037 39.8 9.5 101 292-399 88-195 (347)
135 PHA02866 Hypothetical protein; 75.2 23 0.00049 38.4 10.2 150 558-729 5-164 (333)
136 PLN02276 gibberellin 20-oxidas 74.0 19 0.00041 40.3 9.9 82 646-734 207-303 (361)
137 TIGR03202 pucB xanthine dehydr 73.3 36 0.00078 33.7 10.9 104 301-412 24-133 (190)
138 PLN02638 cellulose synthase A 73.2 8.9 0.00019 48.1 7.6 72 330-401 490-573 (1079)
139 PRK14502 bifunctional mannosyl 72.8 18 0.0004 43.6 9.9 102 291-402 55-186 (694)
140 cd04181 NTP_transferase NTP_tr 72.5 23 0.0005 35.4 9.4 98 290-400 19-116 (217)
141 PF11316 Rhamno_transf: Putati 72.0 32 0.00069 36.2 10.5 94 304-403 42-138 (234)
142 PLN02195 cellulose synthase A 70.9 7.8 0.00017 48.1 6.4 72 330-401 393-476 (977)
143 PLN02947 oxidoreductase 70.5 13 0.00028 41.8 7.6 82 646-734 226-322 (374)
144 PLN02984 oxidoreductase, 2OG-F 69.9 16 0.00035 40.5 8.1 82 646-734 201-298 (341)
145 PHA02923 hypothetical protein; 68.9 14 0.00031 39.9 7.0 75 646-730 68-142 (315)
146 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 68.5 6.5 0.00014 40.1 4.3 83 646-731 97-194 (195)
147 cd02509 GDP-M1P_Guanylyltransf 68.3 53 0.0011 35.0 11.5 104 289-401 21-125 (274)
148 PLN02515 naringenin,2-oxogluta 68.2 12 0.00026 41.7 6.8 82 646-734 196-294 (358)
149 PRK14358 glmU bifunctional N-a 67.0 39 0.00083 39.2 10.8 97 291-403 26-123 (481)
150 PRK14352 glmU bifunctional N-a 66.6 59 0.0013 37.5 12.2 101 290-403 22-123 (482)
151 cd02503 MobA MobA catalyzes th 65.9 52 0.0011 32.1 10.2 93 301-412 24-120 (181)
152 PF00483 NTP_transferase: Nucl 65.8 29 0.00062 35.7 8.6 98 298-402 26-124 (248)
153 PLN02156 gibberellin 2-beta-di 64.9 18 0.0004 40.0 7.3 83 645-734 178-278 (335)
154 PLN02750 oxidoreductase, 2OG-F 64.7 33 0.00071 38.1 9.3 83 645-734 193-292 (345)
155 TIGR03310 matur_ygfJ molybdenu 64.0 83 0.0018 30.7 11.2 100 301-412 23-127 (188)
156 PF02434 Fringe: Fringe-like; 64.0 45 0.00097 35.3 9.8 122 376-519 84-218 (252)
157 PLN02216 protein SRG1 63.8 35 0.00077 38.0 9.4 83 646-734 211-308 (357)
158 cd06431 GT8_LARGE_C LARGE cata 63.8 79 0.0017 34.1 11.8 106 293-403 3-120 (280)
159 PLN03178 leucoanthocyanidin di 63.5 16 0.00034 40.8 6.6 81 647-734 213-308 (360)
160 PRK14355 glmU bifunctional N-a 61.8 68 0.0015 36.7 11.5 89 303-403 31-120 (459)
161 PF13896 Glyco_transf_49: Glyc 61.1 41 0.00089 36.9 9.1 36 363-402 115-150 (317)
162 KOG3917|consensus 61.1 18 0.00039 37.7 5.7 153 288-501 71-226 (310)
163 PLN02458 transferase, transfer 60.9 1.4E+02 0.003 33.2 12.7 99 289-391 110-215 (346)
164 PLN02254 gibberellin 3-beta-di 60.6 20 0.00043 40.1 6.6 82 646-734 211-308 (358)
165 PLN02704 flavonol synthase 60.2 22 0.00048 39.2 6.9 72 656-734 214-296 (335)
166 PLN02485 oxidoreductase 60.1 20 0.00042 39.5 6.5 84 645-734 184-287 (329)
167 cd04192 GT_2_like_e Subfamily 60.0 53 0.0011 32.6 9.2 94 32-137 27-121 (229)
168 KOG4748|consensus 59.8 77 0.0017 35.5 10.8 155 17-177 86-269 (364)
169 cd06430 GT8_like_2 GT8_like_2 59.7 1.6E+02 0.0036 32.2 13.3 95 306-403 12-119 (304)
170 PLN02400 cellulose synthase 59.7 17 0.00036 45.8 6.3 72 330-401 497-580 (1085)
171 PRK14360 glmU bifunctional N-a 59.7 65 0.0014 36.5 10.9 89 303-403 29-118 (450)
172 TIGR03584 PseF pseudaminic aci 59.5 91 0.002 32.2 11.0 91 302-402 23-118 (222)
173 TIGR03552 F420_cofC 2-phospho- 58.1 1.4E+02 0.0031 29.6 11.8 95 303-412 30-127 (195)
174 cd02516 CDP-ME_synthetase CDP- 58.0 1.1E+02 0.0025 30.6 11.2 102 291-403 19-120 (218)
175 PLN02299 1-aminocyclopropane-1 57.6 36 0.00078 37.4 8.0 83 646-734 159-256 (321)
176 cd02520 Glucosylceramide_synth 57.3 69 0.0015 31.6 9.4 90 34-134 31-122 (196)
177 PLN02997 flavonol synthase 57.1 22 0.00047 39.2 6.1 82 646-734 184-280 (325)
178 PLN03002 oxidoreductase, 2OG-F 56.9 24 0.00051 39.0 6.4 82 645-734 182-284 (332)
179 PTZ00273 oxidase reductase; Pr 56.8 48 0.001 36.3 8.7 81 646-734 178-275 (320)
180 PRK14359 glmU bifunctional N-a 56.5 1.3E+02 0.0027 33.9 12.4 104 290-411 20-125 (430)
181 PLN02912 oxidoreductase, 2OG-F 56.4 32 0.00069 38.2 7.4 82 646-734 198-294 (348)
182 PRK13385 2-C-methyl-D-erythrit 55.8 1.3E+02 0.0028 30.8 11.4 103 290-403 20-122 (230)
183 PF02709 Glyco_transf_7C: N-te 55.4 23 0.00049 30.7 4.8 51 456-508 19-71 (78)
184 PLN02639 oxidoreductase, 2OG-F 55.3 39 0.00083 37.4 7.8 83 646-734 191-288 (337)
185 PRK14353 glmU bifunctional N-a 55.2 91 0.002 35.4 11.0 89 303-402 33-122 (446)
186 COG1207 GlmU N-acetylglucosami 55.2 87 0.0019 35.9 10.3 103 288-404 18-121 (460)
187 PLN00417 oxidoreductase, 2OG-F 55.1 33 0.00072 38.1 7.3 82 647-734 205-301 (348)
188 cd06439 CESA_like_1 CESA_like_ 54.6 44 0.00096 34.1 7.7 100 31-133 28-144 (251)
189 PF13532 2OG-FeII_Oxy_2: 2OG-F 54.5 66 0.0014 31.9 8.7 79 643-729 95-192 (194)
190 PF05118 Asp_Arg_Hydrox: Aspar 54.4 33 0.00072 33.8 6.4 78 643-730 78-157 (163)
191 TIGR01173 glmU UDP-N-acetylglu 54.0 82 0.0018 35.6 10.4 87 303-403 28-115 (451)
192 PRK14354 glmU bifunctional N-a 53.9 97 0.0021 35.2 11.0 91 298-403 26-117 (458)
193 cd00218 GlcAT-I Beta1,3-glucur 53.2 1.7E+02 0.0036 30.8 11.4 82 291-376 1-89 (223)
194 PLN02403 aminocyclopropanecarb 53.1 34 0.00074 37.3 6.8 83 646-734 154-252 (303)
195 cd06428 M1P_guanylylT_A_like_N 52.7 1E+02 0.0022 32.2 10.1 103 289-402 20-124 (257)
196 cd02518 GT2_SpsF SpsF is a gly 52.4 1.4E+02 0.003 30.6 10.9 89 302-402 23-111 (233)
197 cd02508 ADP_Glucose_PP ADP-glu 52.2 1.1E+02 0.0023 30.6 9.9 104 289-402 18-132 (200)
198 PF05762 VWA_CoxE: VWA domain 51.0 21 0.00045 37.0 4.6 64 78-141 126-195 (222)
199 KOG0143|consensus 50.7 31 0.00068 38.0 6.1 82 646-734 177-275 (322)
200 PRK05450 3-deoxy-manno-octulos 50.4 1.5E+02 0.0033 30.4 10.9 90 301-403 25-115 (245)
201 PRK14357 glmU bifunctional N-a 50.1 1.1E+02 0.0023 34.8 10.6 89 298-403 24-113 (448)
202 PLN02393 leucoanthocyanidin di 48.7 51 0.0011 36.8 7.5 83 646-734 214-311 (362)
203 PLN02758 oxidoreductase, 2OG-F 47.5 56 0.0012 36.5 7.6 84 646-734 212-310 (361)
204 cd06422 NTP_transferase_like_1 47.3 1.3E+02 0.0027 30.4 9.6 97 289-401 19-118 (221)
205 cd06915 NTP_transferase_WcbM_l 47.1 1.5E+02 0.0033 29.5 10.1 89 303-402 29-117 (223)
206 PRK00155 ispD 2-C-methyl-D-ery 46.9 3.2E+02 0.0069 27.8 12.6 99 291-403 22-120 (227)
207 PF02485 Branch: Core-2/I-Bran 46.0 1.6E+02 0.0034 30.4 10.3 105 293-404 1-115 (244)
208 cd04180 UGPase_euk_like Eukary 45.7 2.3E+02 0.0049 30.3 11.5 124 290-414 18-173 (266)
209 PF02348 CTP_transf_3: Cytidyl 44.9 2.1E+02 0.0045 28.7 10.7 89 303-402 24-112 (217)
210 PF05637 Glyco_transf_34: gala 44.3 17 0.00037 38.2 2.7 119 51-177 34-165 (239)
211 PF01697 Glyco_transf_92: Glyc 43.8 76 0.0017 33.3 7.6 82 304-392 18-117 (285)
212 PRK05569 flavodoxin; Provision 43.6 1.2E+02 0.0026 28.4 8.2 58 289-346 48-111 (141)
213 PF05637 Glyco_transf_34: gala 43.4 16 0.00034 38.5 2.3 30 367-396 63-94 (239)
214 cd04189 G1P_TT_long G1P_TT_lon 43.1 2.2E+02 0.0048 28.8 10.8 98 290-401 21-118 (236)
215 PF03552 Cellulose_synt: Cellu 43.1 17 0.00036 44.1 2.6 55 347-401 163-223 (720)
216 KOG4748|consensus 43.0 85 0.0018 35.2 7.8 19 377-395 174-192 (364)
217 PLN02915 cellulose synthase A 42.6 19 0.00042 45.1 3.1 72 330-401 428-511 (1044)
218 PF00535 Glycos_transf_2: Glyc 42.5 1.8E+02 0.0039 26.6 9.2 97 31-141 25-121 (169)
219 KOG3844|consensus 42.4 2.2E+02 0.0049 32.3 10.8 162 555-732 33-215 (476)
220 PLN02436 cellulose synthase A 42.1 38 0.00082 42.7 5.5 39 363-401 550-589 (1094)
221 PF13506 Glyco_transf_21: Glyc 41.8 58 0.0013 32.4 5.9 110 77-192 12-135 (175)
222 PRK13368 3-deoxy-manno-octulos 41.7 2.1E+02 0.0045 29.2 10.3 84 302-402 26-112 (238)
223 cd06425 M1P_guanylylT_B_like_N 41.5 1.9E+02 0.004 29.6 9.9 100 290-402 21-122 (233)
224 PLN00176 galactinol synthase 41.4 72 0.0016 35.4 7.0 89 101-196 115-226 (333)
225 PLN02474 UTP--glucose-1-phosph 41.2 3.5E+02 0.0076 31.6 12.7 120 291-414 98-250 (469)
226 PLN02190 cellulose synthase-li 41.1 48 0.001 40.5 6.0 54 348-401 250-309 (756)
227 cd06421 CESA_CelA_like CESA_Ce 40.9 1.6E+02 0.0035 29.3 9.2 88 32-133 32-120 (234)
228 cd06427 CESA_like_2 CESA_like_ 40.0 1.5E+02 0.0032 30.3 8.9 49 83-134 72-120 (241)
229 PF05045 RgpF: Rhamnan synthes 39.4 2.7E+02 0.0058 32.7 11.7 93 289-387 263-357 (498)
230 PF03452 Anp1: Anp1; InterPro 39.4 1.6E+02 0.0034 31.8 9.0 37 98-140 142-178 (269)
231 cd02538 G1P_TT_short G1P_TT_sh 39.3 3E+02 0.0065 28.2 11.1 101 289-402 20-121 (240)
232 PLN02248 cellulose synthase-li 39.0 35 0.00076 43.2 4.6 53 349-401 584-642 (1135)
233 TIGR01479 GMP_PMI mannose-1-ph 38.7 2.1E+02 0.0044 33.2 10.6 105 289-402 21-127 (468)
234 TIGR00453 ispD 2-C-methyl-D-er 38.5 2.5E+02 0.0053 28.3 10.1 99 290-403 17-115 (217)
235 KOG2754|consensus 38.4 1.3E+02 0.0027 33.9 8.1 104 7-137 8-112 (443)
236 PLN03193 beta-1,3-galactosyltr 37.5 2.7E+02 0.0059 31.8 10.8 143 342-507 198-354 (408)
237 cd02517 CMP-KDO-Synthetase CMP 37.1 3.1E+02 0.0066 28.0 10.7 87 301-402 24-113 (239)
238 PRK09451 glmU bifunctional N-a 36.9 2E+02 0.0044 32.7 10.2 87 303-403 33-120 (456)
239 KOG1476|consensus 36.7 4.2E+02 0.009 29.3 11.6 84 290-375 86-172 (330)
240 cd06426 NTP_transferase_like_2 36.5 1.7E+02 0.0037 29.3 8.5 88 303-402 29-116 (220)
241 cd02513 CMP-NeuAc_Synthase CMP 36.0 1.4E+02 0.003 30.0 7.8 110 301-420 24-143 (223)
242 cd06432 GT8_HUGT1_C_like The C 36.0 2.2E+02 0.0048 30.0 9.5 99 301-403 11-118 (248)
243 cd04187 DPM1_like_bac Bacteria 35.9 2.3E+02 0.0051 27.1 9.1 86 32-133 28-114 (181)
244 PRK09382 ispDF bifunctional 2- 35.8 2.8E+02 0.006 31.4 10.7 106 290-412 23-131 (378)
245 COG0836 {ManC} Mannose-1-phosp 35.3 4.8E+02 0.011 29.0 11.9 108 288-402 21-129 (333)
246 PF03808 Glyco_tran_WecB: Glyc 33.8 1.9E+02 0.0041 28.6 8.2 77 301-385 32-108 (172)
247 TIGR01207 rmlA glucose-1-phosp 33.8 2.7E+02 0.0058 30.0 9.9 100 290-402 20-120 (286)
248 PRK15480 glucose-1-phosphate t 33.5 3E+02 0.0066 29.8 10.3 101 290-402 24-124 (292)
249 cd04183 GT2_BcE_like GT2_BcbE_ 33.2 2.7E+02 0.0059 28.2 9.5 94 298-401 25-119 (231)
250 PRK02726 molybdopterin-guanine 33.0 3.3E+02 0.0071 27.4 9.9 86 301-403 31-117 (200)
251 cd04190 Chitin_synth_C C-termi 32.8 97 0.0021 32.0 6.2 86 36-125 1-100 (244)
252 cd06914 GT8_GNT1 GNT1 is a fun 32.6 4.1E+02 0.0089 28.8 11.0 136 31-196 29-173 (278)
253 COG1213 Predicted sugar nucleo 32.6 87 0.0019 33.1 5.6 105 290-410 21-128 (239)
254 cd02525 Succinoglycan_BP_ExoA 32.5 2.2E+02 0.0048 28.5 8.7 86 32-132 30-115 (249)
255 KOG2288|consensus 32.5 2E+02 0.0043 30.9 8.1 90 312-403 40-132 (274)
256 PRK15171 lipopolysaccharide 1, 32.4 3.3E+02 0.0072 30.1 10.5 107 291-404 24-144 (334)
257 cd06442 DPM1_like DPM1_like re 32.4 2.8E+02 0.0062 27.3 9.4 89 32-134 26-114 (224)
258 KOG3710|consensus 32.3 2E+02 0.0042 30.4 7.9 89 644-733 142-239 (280)
259 KOG1461|consensus 30.9 3.5E+02 0.0077 32.5 10.6 113 288-414 43-166 (673)
260 COG4009 Uncharacterized protei 30.9 89 0.0019 27.4 4.4 46 85-130 23-76 (88)
261 PLN02917 CMP-KDO synthetase 30.9 3.4E+02 0.0074 29.3 10.2 87 302-402 71-159 (293)
262 TIGR01753 flav_short flavodoxi 30.7 2.4E+02 0.0051 26.0 7.9 58 289-346 45-110 (140)
263 cd02541 UGPase_prokaryotic Pro 30.2 2.6E+02 0.0056 29.2 9.0 101 290-402 21-143 (267)
264 PLN03133 beta-1,3-galactosyltr 29.3 1.1E+03 0.024 28.7 15.0 156 322-499 420-589 (636)
265 KOG2287|consensus 29.1 8.3E+02 0.018 27.1 15.5 186 291-499 95-298 (349)
266 cd04198 eIF-2B_gamma_N The N-t 29.1 3.6E+02 0.0077 27.3 9.5 99 290-402 21-122 (214)
267 PLN02769 Probable galacturonos 29.1 1.1E+02 0.0025 36.6 6.4 68 101-172 454-524 (629)
268 PLN03181 glycosyltransferase; 28.5 44 0.00096 38.0 2.8 20 377-396 197-216 (453)
269 TIGR02410 carnitine_TMLD trime 28.4 1.9E+02 0.0041 32.3 7.9 31 658-691 177-213 (362)
270 TIGR01208 rmlA_long glucose-1- 28.4 4.1E+02 0.0089 29.0 10.5 100 290-402 20-119 (353)
271 cd06435 CESA_NdvC_like NdvC_li 27.6 3.2E+02 0.007 27.3 8.9 88 33-131 28-117 (236)
272 PF09967 DUF2201: VWA-like dom 26.8 63 0.0014 30.5 3.2 32 78-109 63-94 (126)
273 cd04184 GT2_RfbC_Mx_like Myxoc 26.8 4.2E+02 0.0091 25.6 9.3 91 33-137 31-123 (202)
274 TIGR00454 conserved hypothetic 26.7 5.5E+02 0.012 25.6 10.2 98 301-412 25-126 (183)
275 COG1215 Glycosyltransferases, 26.5 2.1E+02 0.0046 31.8 8.0 95 32-129 54-168 (439)
276 COG1208 GCD1 Nucleoside-diphos 26.4 4.3E+02 0.0093 29.5 10.2 99 290-402 22-120 (358)
277 PF03214 RGP: Reversibly glyco 26.4 94 0.002 34.4 4.8 31 363-396 79-109 (348)
278 PRK00725 glgC glucose-1-phosph 26.3 3.9E+02 0.0085 30.4 10.1 104 289-402 35-150 (425)
279 PRK05568 flavodoxin; Provision 26.2 2E+02 0.0042 27.0 6.5 56 289-346 48-110 (142)
280 TIGR03030 CelA cellulose synth 26.2 3.7E+02 0.0081 32.9 10.5 90 32-125 131-255 (713)
281 PRK00844 glgC glucose-1-phosph 26.1 3.4E+02 0.0074 30.6 9.5 104 289-402 25-138 (407)
282 cd04179 DPM_DPG-synthase_like 25.9 3.9E+02 0.0085 25.3 8.8 89 32-134 27-115 (185)
283 cd00250 CAS_like Clavaminic ac 25.9 1.1E+02 0.0024 32.1 5.2 33 656-691 92-130 (262)
284 PF09258 Glyco_transf_64: Glyc 25.5 1.6E+02 0.0034 31.2 6.2 96 294-402 2-98 (247)
285 PF01128 IspD: 2-C-methyl-D-er 25.3 5.6E+02 0.012 26.7 10.1 99 302-412 27-128 (221)
286 COG1211 IspD 4-diphosphocytidy 25.2 6.4E+02 0.014 26.6 10.6 93 303-403 32-124 (230)
287 cd02524 G1P_cytidylyltransfera 24.8 5.7E+02 0.012 26.4 10.3 100 289-402 18-139 (253)
288 PLN03183 acetylglucosaminyltra 24.6 9.5E+02 0.021 27.7 12.5 118 289-409 76-208 (421)
289 PRK10018 putative glycosyl tra 24.3 4.7E+02 0.01 28.0 9.7 103 32-138 5-126 (279)
290 TIGR00568 alkb DNA alkylation 24.3 1.3E+02 0.0029 30.0 5.1 64 643-710 93-161 (169)
291 cd06533 Glyco_transf_WecG_TagA 24.2 3.6E+02 0.0078 26.7 8.2 76 301-385 30-106 (171)
292 KOG3889|consensus 24.1 1.3E+02 0.0028 32.5 5.1 80 603-691 135-223 (371)
293 COG5285 Protein involved in bi 24.0 1.9E+02 0.0042 31.5 6.5 78 643-724 112-220 (299)
294 TIGR00639 PurN phosphoribosylg 23.8 7.7E+02 0.017 24.9 11.4 96 295-398 3-98 (190)
295 PF00682 HMGL-like: HMGL-like 23.8 5.8E+02 0.013 26.1 10.1 107 293-403 56-174 (237)
296 PF03314 DUF273: Protein of un 23.2 87 0.0019 32.6 3.5 32 377-408 40-72 (222)
297 PRK14489 putative bifunctional 23.0 7.7E+02 0.017 27.5 11.5 93 301-410 30-128 (366)
298 PF03314 DUF273: Protein of un 23.0 1.5E+02 0.0033 30.8 5.2 69 53-133 4-74 (222)
299 cd00897 UGPase_euk Eukaryotic 22.9 7.8E+02 0.017 27.0 11.1 122 290-414 21-174 (300)
300 cd00505 Glyco_transf_8 Members 22.8 4.3E+02 0.0094 27.3 8.9 96 301-404 11-119 (246)
301 PRK11204 N-glycosyltransferase 22.5 4.8E+02 0.01 29.1 9.8 92 31-125 53-161 (420)
302 PRK10073 putative glycosyl tra 22.4 9.9E+02 0.021 26.0 12.0 42 100-141 87-128 (328)
303 cd06434 GT2_HAS Hyaluronan syn 22.1 4.5E+02 0.0097 26.1 8.7 40 83-126 65-105 (235)
304 COG1861 SpsF Spore coat polysa 22.1 8.3E+02 0.018 25.9 10.3 89 302-402 27-115 (241)
305 KOG3200|consensus 21.8 1.4E+02 0.0031 30.1 4.6 90 560-668 14-109 (224)
306 cd04193 UDPGlcNAc_PPase UDPGlc 21.4 6.1E+02 0.013 28.0 10.0 124 290-414 33-195 (323)
307 PF09949 DUF2183: Uncharacteri 20.9 3.1E+02 0.0068 25.0 6.4 76 36-118 2-80 (100)
308 PF10933 DUF2827: Protein of u 20.1 1.2E+02 0.0026 34.0 4.1 57 508-583 122-178 (364)
309 PF09864 MliC: Membrane-bound 20.1 76 0.0016 26.6 2.1 46 646-691 7-52 (72)
310 COG2266 GTP:adenosylcobinamide 20.0 7.4E+02 0.016 25.1 9.2 94 303-413 27-120 (177)
No 1
>KOG1971|consensus
Probab=100.00 E-value=3.3e-84 Score=691.14 Aligned_cols=413 Identities=38% Similarity=0.745 Sum_probs=395.8
Q ss_pred cccccceeeeeHHHHHHHHHhccCCCCCChhHHHHHhhhchhhhccccccccccccccccccCCcccceecccCCCceeE
Q psy14856 156 RYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHL 235 (734)
Q Consensus 156 R~LNSG~~iG~a~~l~~l~~~~~~~d~~dDQl~~t~i~l~~~~r~~~~i~lD~~s~iFqnl~g~~~dv~l~~~~~~~~r~ 235 (734)
||||||||||||+.+.+++ .|+++|.+| ++|++||+|++|||++|+.+||+|+|+ ++..|+
T Consensus 1 r~l~sggf~g~a~~~~q~~-~~~~~d~~d-----------------~ni~ld~~~~~fq~l~g~~~dv~Lkf~-~~~~~~ 61 (415)
T KOG1971|consen 1 RFLNSGGFIGYAPQVHQIV-QWPIEDTDD-----------------LNITLDHRSRIFQNLNGAYEDVVLKFS-SGQVRA 61 (415)
T ss_pred CccccCCccccCccccccc-ccccCcchh-----------------hcccccCcCcccccCcCCcCCeeEecc-cCchhh
Confidence 7999999999999999999 999998888 799999999999999999999999999 999999
Q ss_pred EeeccCccceEEecCCCcccccccccccccccccccCCeeccCcc-ccCCCCCCCCCcEEEEEEecCChhHHHHHHHHHH
Q psy14856 236 TNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIK-HLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIA 314 (734)
Q Consensus 236 ~n~~~~t~P~vih~Ng~~k~~ln~l~ny~~~~w~~~gc~~c~~~~-~l~~~~~~~~P~V~I~I~i~n~~~~L~~fL~sL~ 314 (734)
.|++|.|+|+++|||||+|.+||+||||+|+.|+ +|..|.++. ++.+. . ++.|.
T Consensus 62 ln~~~pt~~l~~~~n~~~K~~~d~l~nY~~r~~~--~~~l~~~~~r~~~~s---~--------------------~q~l~ 116 (415)
T KOG1971|consen 62 LNVAYPTLPLTVHGNGPAKFMLDYLGNYIPREWT--GCSLCCKNYRELIKS---N--------------------LQRLL 116 (415)
T ss_pred hhhcCCCcceeeccCccHHHHHHHHhhhcchhhh--hhhccccccchhhhh---c--------------------cccch
Confidence 9999999999999999999999999999999997 799999887 76652 2 89999
Q ss_pred cccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCCh
Q psy14856 315 NLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNP 394 (734)
Q Consensus 315 ~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np 394 (734)
.++||++...++|.|....+.+.++.+..++.++|...+++.+....+..+||+++++.|+ | |++|||.++++|
T Consensus 117 ~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r-----~-~~~dad~~i~~P 190 (415)
T KOG1971|consen 117 ELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFR-----K-FSVDADFVITRP 190 (415)
T ss_pred hccCCCCHHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhh-----h-cccccceeccCC
Confidence 9999999999999999999999999999999999999999999999999999999999986 6 999999999999
Q ss_pred HHHHHHHHcCCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc
Q psy14856 395 DVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK 474 (734)
Q Consensus 395 ~tL~~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~ 474 (734)
++++.|+..++.+||||++++++||+|||++++.+|||+||+||++|+++++ +|+|+||+|.++||++...++. +
T Consensus 191 ~~~~~li~~~k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~--vg~~~~P~v~~~yl~~~~~f~~-e-- 265 (415)
T KOG1971|consen 191 NTLRNLIVLNKEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNR--VGVWNVPYVCGAYLDSHDAFRV-E-- 265 (415)
T ss_pred hhHHHHHHHhhhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccc--eeEEeecccceeEEecccceee-e--
Confidence 9999999999999999999999999999999999999999999999999999 9999999999999999888886 3
Q ss_pred cccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCCCCCCCCCc-cceecccCcchhhhhccchHHHhhhCCCCC
Q psy14856 475 TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNP-EVYELIRNPLDWDLRYIHPEYQKSLLPDTV 553 (734)
Q Consensus 475 ~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~~~~~~~h~-~l~~~~~n~~dw~e~yihp~y~~~~~~~~~ 553 (734)
......|+||.||..+|..|++|+++|+.++|+|+..++|.++|+|+ ++|+||+|+.+|.++|||++|.+.....+.
T Consensus 266 --~~~~~~Dpdm~~~~~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h~p~qa~LHrg~~~~~a~~~~ 343 (415)
T KOG1971|consen 266 --SSEDNRDPDMGFCVDAREVGLFVCLSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNSHDPGQAYLHRGYHKHGARATI 343 (415)
T ss_pred --ccCcCCCCccccccchhhcceeEEecccccCCeeEeeccccccccCCCchhhhccCcCCCccceecCcchhccccccC
Confidence 24566899999999999999999999999999999999999999999 999999999999999999999999998878
Q ss_pred CCCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHHHHhhc
Q psy14856 554 NNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVV 627 (734)
Q Consensus 554 ~~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l~~~v~ 627 (734)
+.+|||+|||||++ ++|++|+++||+|++|++|.+.++|++|||++|||+||||+++|+++.|+.+++.|++
T Consensus 344 ~~~~~~nv~~~~~~--~~c~el~~~me~f~~Ws~g~~~D~r~~~gye~~~trdi~m~q~~~e~~~~~~~~~~~~ 415 (415)
T KOG1971|consen 344 VGQPCPNVYWFPIS--SLCDELVEEMEEFGRWSGGCAEDKRLAGGYENVPTRDIHMRQVGFERLWLKFLRTYVR 415 (415)
T ss_pred CCCCCCceeeehhH--HHHHHHHHHHHHhhcccccchhhhhhcCCcccCCchhhHHHhhhhHHHHHHHHHHhhC
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999874
No 2
>KOG4179|consensus
Probab=100.00 E-value=1.6e-37 Score=328.03 Aligned_cols=242 Identities=20% Similarity=0.397 Sum_probs=219.9
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc-----
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN----- 362 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g----- 362 (734)
.|+|.+++.++|.++.++.|+..++++||||.++.|||.. +.|++.+++++|++..+..|++|++-...+...
T Consensus 2 sptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie~freWL~nv~~~y~~V~~e~~~e~~s~~d~~ 81 (568)
T KOG4179|consen 2 SPTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIEYFREWLENVGDLYHRVKWEPFIEPKSYPDEH 81 (568)
T ss_pred CceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHHHHHHHHHhcCCccceeEEEecCCccccCccc
Confidence 4899999999999999999999999999999999999996 899999999999999999999999875443321
Q ss_pred ------------HHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCceeeecccCCCcccccccccccCCc
Q psy14856 363 ------------SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADG 430 (734)
Q Consensus 363 ------------~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~G 430 (734)
..+.|+.|+..|+..++||+||.|+|++|+|++||+.|+..+++|||||+.+ ..++|||||+++++|
T Consensus 82 ~pk~W~~sr~q~lm~lKeea~~~~r~~~adyilf~d~d~lLts~dTl~llm~l~~~ivapml~S-~~~ySnfwcgit~~~ 160 (568)
T KOG4179|consen 82 GPKHWPDSRFQHLMSLKEEALNWARSGWADYILFKDEDNLLTSGDTLPLLMNLILPIVAPMLKS-HVLYSNFWCGITPSG 160 (568)
T ss_pred CCccCchHHHHHHHHHHHHHHHHHHhhhcceeEEeehhheeeCCchHhHHHhcccceechhhhc-ccccccceeccCCcc
Confidence 2688999999999999999999999999999999999999999999999965 468999999999999
Q ss_pred cccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc--cccc------cCCCchhHHHHHHHHHcCeeEEEe
Q psy14856 431 FYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK--TIYT------LNSMDYDMAFCTNLRNKGIHLKID 502 (734)
Q Consensus 431 yY~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~--~~f~------~~~~deDm~Fc~~ar~~Gi~myv~ 502 (734)
||.|+.+|+.|.+++| .||+.|||||+++||+ |++ +.+ .+|+ .++.|+.+.|+.+|+++||.|++|
T Consensus 161 yyrrt~Ey~~~~n~kR--~g~f~vpmvhst~lid---l~~-~~s~~LtFd~~~pnY~gp~DdiiVFa~Sa~~aGIql~~c 234 (568)
T KOG4179|consen 161 YYRRTSEYLIIQNNKR--EGCFPVPMVHSTFLID---LRT-EASDYLTFDPPHPNYTGPFDDIIVFAVSAKNAGIQLHAC 234 (568)
T ss_pred cccCChhhhhhhhhee--ccccccccccceeeee---chh-ccccceeecCCCCCCCCCCCCeEEEEEeccccCceEEEe
Confidence 9999999999999999 9999999999999999 776 555 6666 478999999999999999999999
Q ss_pred cccceEEeeccCCCCCCCCCccceecccCcchhhhhccchHHHhhhCC
Q psy14856 503 STQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLP 550 (734)
Q Consensus 503 N~~~~G~l~~~~~~~~~~~h~~l~~~~~n~~dw~e~yihp~y~~~~~~ 550 (734)
|+..|||+++|.. .|+.| ++....++|-.-....++
T Consensus 235 N~~~yGy~~~Plk-----p~qtl-------eedrvnl~~~i~e~L~d~ 270 (568)
T KOG4179|consen 235 NQVNYGYFVNPLK-----PHQTL-------EEDRVNLIHQIAEALADE 270 (568)
T ss_pred cccccceeccCCC-----CCcch-------HHHHHHHHHHHHHHHhcC
Confidence 9999999999987 78766 666788999888887764
No 3
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.75 E-value=1.6e-17 Score=170.57 Aligned_cols=154 Identities=19% Similarity=0.308 Sum_probs=109.7
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCc-ccccccC-eeeeccchHHHHHHHHHHhhc--hhhhhhhcCCC
Q psy14856 563 WFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGY-EAVPTRD-IHMKQVGLAGVWAEFLRKYVV--PLQEREFIGYH 638 (734)
Q Consensus 563 ~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~-~~vpt~d-i~~~~~g~~~~~~~~l~~~v~--P~~~~~f~~~~ 638 (734)
...|||+++|+++++.+|+- .|..|+.+ .|.+ ..|.+.+ +. .+-.+.+.+.+.+.+++. |+ |....
T Consensus 5 I~~vLs~eec~~~~~~le~~-~~~dg~~t----aG~~~~~vKnN~ql~-~d~~~a~~l~~~i~~~L~~~~l----~~sa~ 74 (226)
T PRK05467 5 IPDVLSPEEVAQIRELLDAA-EWVDGRVT----AGAQAAQVKNNQQLP-EDSPLARELGNLILDALTRNPL----FFSAA 74 (226)
T ss_pred ecccCCHHHHHHHHHHHHhc-CCccCCcC----cCccchhcccccccC-CCCHHHHHHHHHHHHHHhcCch----hhhhc
Confidence 45799999999999999995 57766632 1211 2344333 33 222243444444555553 33 22111
Q ss_pred CCCCCCcceeEEEEcCCCCCCCCccccCC-------------ceEEEEEecCCCCcCCCccEEEee-ccceeecccceeE
Q psy14856 639 HEPVRAPMSFVVRYRPDEQPSLRPHHDSS-------------TYTINIALNQVGVDYEGGGCRFIR-YNCNVTATRMGWM 704 (734)
Q Consensus 639 ~~~l~~~~~fvvrY~~~~~~~l~~H~D~S-------------~~T~ni~Ln~~~~dfeGGg~~F~~-~~~~v~~~~~G~a 704 (734)
. +.+.+...+.||.+++ ++++|+|++ .+|++++||++. +|+||+|.|.. ++...++|++|.+
T Consensus 75 l-p~~i~~~~f~rY~~G~--~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~-~yeGGEl~~~~~~g~~~Vkp~aG~~ 150 (226)
T PRK05467 75 L-PRKIHPPLFNRYEGGM--SYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPD-DYDGGELVIEDTYGEHRVKLPAGDL 150 (226)
T ss_pred c-ccccccceEEEECCCC--ccCccccCCcccCCCCCcceeEEEEEEEEeCCCC-CCcCCceEEecCCCcEEEecCCCeE
Confidence 1 2234567899999885 599999964 589999999875 89999999974 3344567999999
Q ss_pred EEeCCCcccccCcccCCceeEEEEEeee
Q psy14856 705 LMHPGRLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 705 l~h~g~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
|+||+.+ +|+|.|||+|+||++++|+
T Consensus 151 vlfps~~--lH~v~pVt~G~R~~~~~Wi 176 (226)
T PRK05467 151 VLYPSTS--LHRVTPVTRGVRVASFFWI 176 (226)
T ss_pred EEECCCC--ceeeeeccCccEEEEEecH
Confidence 9999985 8999999999999999997
No 4
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.70 E-value=5.6e-16 Score=158.68 Aligned_cols=200 Identities=11% Similarity=0.156 Sum_probs=135.0
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEE-EecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc-HHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMF-VYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN-SKEARN 368 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~-I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g-~a~arN 368 (734)
|+|+|+||+||++.+|+++|++|.+|+||..+++|+ +++|+|.|.++++++..+.......++.+...++.| ++.|+|
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~n 80 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALA 80 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHHH
Confidence 689999999999999999999999999999877754 445999999999998876654445777777666677 588999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CCce--eeeccc--CCCcccccccccccC--CccccchHHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NESL--IAPLLV--RPFKAWSNFWGALNA--DGFYARSFDYMN 440 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk~I--VaP~l~--~~~~~wsNFWgal~~--~GyY~Rsedy~~ 440 (734)
.|++.| ++||++++|||+++. |++|+.+... +..+ |.+-.. ... .+|+..+.. ..++...+.
T Consensus 81 ~g~~~a---~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~v~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--- 150 (232)
T cd06437 81 EGMKVA---KGEYVAIFDADFVPP-PDFLQKTPPYFADPKLGFVQTRWGHINAN---YSLLTRVQAMSLDYHFTIEQ--- 150 (232)
T ss_pred HHHHhC---CCCEEEEEcCCCCCC-hHHHHHhhhhhcCCCeEEEecceeeEcCC---CchhhHhhhhhHHhhhhHhH---
Confidence 999876 799999999999997 9999997753 3332 222110 000 112111100 000000000
Q ss_pred HHhcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccce
Q psy14856 441 IINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEY 507 (734)
Q Consensus 441 i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~ 507 (734)
... .. .+.. ....+++.++++++++. .+ .|......||+.||.+++++|..+...+....
T Consensus 151 ~~~-~~--~~~~-~~~~g~~~~~rr~~~~~-vg--g~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v 210 (232)
T cd06437 151 VAR-SS--TGLF-FNFNGTAGVWRKECIED-AG--GWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVV 210 (232)
T ss_pred hhH-hh--cCCe-EEeccchhhhhHHHHHH-hC--CCCCCcchhhHHHHHHHHHCCCeEEEecccee
Confidence 011 11 1111 01123344689999987 32 36656678999999999999988877765443
No 5
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=99.68 E-value=2.9e-16 Score=155.89 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=106.7
Q ss_pred CceecCC-CCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHHHHhhchhhhhhhcCC
Q psy14856 559 PDVFWFP-IVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGY 637 (734)
Q Consensus 559 p~Vy~fp-v~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l~~~v~P~~~~~f~~~ 637 (734)
|.|+.++ +||+++|++||+++|..+. .+.........+....+.+....+-+-.-.....+.+.++|+ .+++..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~-~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~----~~~~~~ 75 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGW-RGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLA----DFLGLL 75 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcc-cceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHH----HHHCCC
Confidence 5677775 9999999999999999764 332211010000001122211111111100112223334443 333322
Q ss_pred CCCCCCCcceeEEEEcCCCCCCCCccccCC--------ceEEEEEecCCCCcCCCccEEEeeccc---eeecccceeEEE
Q psy14856 638 HHEPVRAPMSFVVRYRPDEQPSLRPHHDSS--------TYTINIALNQVGVDYEGGGCRFIRYNC---NVTATRMGWMLM 706 (734)
Q Consensus 638 ~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S--------~~T~ni~Ln~~~~dfeGGg~~F~~~~~---~v~~~~~G~al~ 706 (734)
.......++..++||.+++ ++.+|+|.+ .+|+.++||+ +++||+|.|...++ ....|++|.+|+
T Consensus 76 ~~~~~~~~~~~~~~Y~~g~--~~~~H~D~~~~~~~~~r~~T~~~yLn~---~~~GG~~~f~~~~~~~~~~v~P~~G~~v~ 150 (178)
T smart00702 76 RGLPLSAEDAQVARYGPGG--HYGPHVDNFEDDENGDRIATFLLYLND---VEEGGELVFPGLGLMVCATVKPKKGDLLF 150 (178)
T ss_pred chhhccCcceEEEEECCCC--cccCcCCCCCCCCCCCeEEEEEEEecc---CCcCceEEecCCCCccceEEeCCCCcEEE
Confidence 1112257789999999875 699999965 6999999998 89999999998765 234599999999
Q ss_pred eCCCc-ccccCcccCCceeEEEEEeee
Q psy14856 707 HPGRL-THYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 707 h~g~l-th~H~g~~vT~G~Ryilv~F~ 732 (734)
|+... .++|++.||++|+||+++.|+
T Consensus 151 f~~~~~~~~H~v~pv~~G~r~~~~~W~ 177 (178)
T smart00702 151 FPSGRGRSLHGVCPVTRGSRWAITGWI 177 (178)
T ss_pred EeCCCCCccccCCcceeCCEEEEEEEE
Confidence 98631 258999999999999999996
No 6
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.68 E-value=5.3e-16 Score=160.29 Aligned_cols=200 Identities=16% Similarity=0.182 Sum_probs=135.3
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEE-ec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFV-YN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I-~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
|+|+|+||++|++..|+++|+||.+++||...++++| ++ |+|.|.++++++... ....+.++....+.|++.|+|
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~---~~~~i~~~~~~~~~G~~~a~n 77 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLP---SIFRVVVVPPSQPRTKPKACN 77 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccC---CCeeEEEecCCCCCchHHHHH
Confidence 7899999999999999999999999999987777654 34 899999998876421 233566666667789999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceee--ecccCCCcccccccccccCCccccchHHHHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIA--PLLVRPFKAWSNFWGALNADGFYARSFDYMNII 442 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVa--P~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~ 442 (734)
.|++.| ++||++++|||+++. |+.|..+++. +..+++ +-+..... -.+++..... ......+...
T Consensus 78 ~g~~~a---~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~ 148 (241)
T cd06427 78 YALAFA---RGEYVVIYDAEDAPD-PDQLKKAVAAFARLDDKLACVQAPLNYYNA-RENWLTRMFA----LEYAAWFDYL 148 (241)
T ss_pred HHHHhc---CCCEEEEEcCCCCCC-hHHHHHHHHHHHhcCCCEEEEeCceEeeCC-CccHHHHHHH----HHHHHHHHHH
Confidence 999875 689999999999997 9999999962 244432 22110000 0111111000 0000111111
Q ss_pred -h-cccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceE
Q psy14856 443 -N-GDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYG 508 (734)
Q Consensus 443 -~-~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G 508 (734)
. ..+ .|. ..+.-+++.++++++++. .+ .|....+.||+.||.+++++|+.+..++...+.
T Consensus 149 ~~~~~~--~~~-~~~~~g~~~~~rr~~~~~-vg--g~~~~~~~eD~~l~~rl~~~G~r~~~~~~~~~~ 210 (241)
T cd06427 149 LPGLAR--LGL-PIPLGGTSNHFRTDVLRE-LG--GWDPFNVTEDADLGLRLARAGYRTGVLNSTTLE 210 (241)
T ss_pred HHHHHh--cCC-eeecCCchHHhhHHHHHH-cC--CCCcccchhhHHHHHHHHHCCceEEEecccccc
Confidence 1 011 222 123345678899999998 33 244445789999999999999999888755443
No 7
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.68 E-value=9.8e-16 Score=170.07 Aligned_cols=202 Identities=14% Similarity=0.226 Sum_probs=136.7
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCC-ceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCC----CC
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPA-KKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNS----TV 361 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk-~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~----~~ 361 (734)
+..|+|+|+||+|||++.|+++|++|.+|+||+ .+| ++|+| |+|.|.++++++.++++. ...++++..++ ..
T Consensus 37 ~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eI-IVVDd~StD~T~~i~~~~~~~~~~-~~~i~vi~~~~~~~g~~ 114 (384)
T TIGR03469 37 EAWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHV-ILVDDHSTDGTADIARAAARAYGR-GDRLTVVSGQPLPPGWS 114 (384)
T ss_pred CCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEE-EEEeCCCCCcHHHHHHHHHHhcCC-CCcEEEecCCCCCCCCc
Confidence 357999999999999999999999999999995 344 33444 999999999998865532 23688886432 24
Q ss_pred cHHHHHHHHHHhhhhcC--ccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCcccccccccccCCccccch
Q psy14856 362 NSKEARNLAVENSLHKG--VDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFKAWSNFWGALNADGFYARS 435 (734)
Q Consensus 362 g~a~arN~al~~a~~~~--~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rs 435 (734)
|+..|.|.|++.|++.. +||++++|||+.++ |++|+.|++. +..+++++.... ..++|.......+..-.
T Consensus 115 Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~~~~vs~~~~~~---~~~~~~~~~~~~~~~~~ 190 (384)
T TIGR03469 115 GKLWAVSQGIAAARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEGLDLVSLMVRLR---CESFWEKLLIPAFVFFF 190 (384)
T ss_pred chHHHHHHHHHHHhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCCCEEEeccccc---CCCHHHHHHHHHHHHHH
Confidence 78889999999886433 89999999999997 9999999962 446666555211 12333221000000000
Q ss_pred HH--HHHHHhcccCCcceeeec-eeeeEEeeehhhHhhccccccccc--CCCchhHHHHHHHHHcCeeEEEec
Q psy14856 436 FD--YMNIINGDQGGKGIWNVP-YITNCYLMKTSVIKATNIKTIYTL--NSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 436 ed--y~~i~~~~~~~~G~~nVP-~v~~~~LI~~~vL~~~~~~~~f~~--~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
.. .+..+...+ . .+. ..++|.+++|+++++ .+. |.. ....||.++|.++|++|..+.+.+
T Consensus 191 ~~~~~~~~~~~~~--~---~~~~~~G~~~lirr~~~~~-vGG--f~~~~~~~~ED~~L~~r~~~~G~~v~~~~ 255 (384)
T TIGR03469 191 QKLYPFRWVNDPR--R---RTAAAAGGCILIRREALER-IGG--IAAIRGALIDDCTLAAAVKRSGGRIWLGL 255 (384)
T ss_pred HHhcchhhhcCCC--c---cceeecceEEEEEHHHHHH-cCC--HHHHhhCcccHHHHHHHHHHcCCcEEEEe
Confidence 00 001111111 1 111 236788999999998 433 321 247899999999999998888754
No 8
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.67 E-value=1.8e-15 Score=161.68 Aligned_cols=205 Identities=12% Similarity=0.148 Sum_probs=145.3
Q ss_pred EEEEEecCCh-hHHHHHHHHHHcccCCCceEEE-EEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 294 LISVFIDKPT-AFLEEFLNKIANLNYPAKKISM-FVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 294 ~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
+|+||+||++ ..|.++|+||.++.+|....+| +|+| |+|.|.+++.++... ..++.|+++..+++.|.+.|+|.|
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~--~~~~~v~vi~~~~n~G~~~a~N~g 78 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYK--KYLPKVKVLRLKKREGLIRARIAG 78 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHh--hcCCcEEEEEcCCCCCHHHHHHHH
Confidence 6899999999 9999999999999998753343 4444 899999988774332 234689999999999999999999
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCc-cccccccccc--CCc--------cccch
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFK-AWSNFWGALN--ADG--------FYARS 435 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~-~wsNFWgal~--~~G--------yY~Rs 435 (734)
++.| ++||++|+|+|+.++ |++|+.|++. ...+++|.+...+. -+. +-+... ..+ +....
T Consensus 79 ~~~A---~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T cd02510 79 ARAA---TGDVLVFLDSHCEVN-VGWLEPLLARIAENRKTVVCPIIDVIDADTFE-YRGSSGDARGGFDWSLHFKWLPLP 153 (299)
T ss_pred HHHc---cCCEEEEEeCCcccC-ccHHHHHHHHHHhCCCeEEEeeeccccCCCee-EecCCCceeEEecccceeccccCC
Confidence 9886 699999999999996 9999999962 45678886632110 000 000000 000 11111
Q ss_pred HHHHHHHhcccCCcceeeecee-eeEEeeehhhHhhcccccccccCC---CchhHHHHHHHHHcCeeEEEecccceEEee
Q psy14856 436 FDYMNIINGDQGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLNS---MDYDMAFCTNLRNKGIHLKIDSTQEYGHLV 511 (734)
Q Consensus 436 edy~~i~~~~~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~~---~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~ 511 (734)
..+. ..... .....+|.+ ++|++|+++++.+ .+ .|+... ..||.+||.+++++|..+.+.+.....|+-
T Consensus 154 ~~~~--~~~~~--~~~~~~~~~~g~~~~irr~~~~~-vG--gfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~ 226 (299)
T cd02510 154 EEER--RRESP--TAPIRSPTMAGGLFAIDREWFLE-LG--GYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIF 226 (299)
T ss_pred HHHh--hhcCC--CCCccCccccceeeEEEHHHHHH-hC--CCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEec
Confidence 1111 01111 234567777 4577899999998 43 244322 259999999999999999999999999986
Q ss_pred c
Q psy14856 512 D 512 (734)
Q Consensus 512 ~ 512 (734)
.
T Consensus 227 ~ 227 (299)
T cd02510 227 R 227 (299)
T ss_pred c
Confidence 5
No 9
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.65 E-value=3.7e-15 Score=149.23 Aligned_cols=164 Identities=16% Similarity=0.224 Sum_probs=121.6
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc---HHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN---SKEAR 367 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g---~a~ar 367 (734)
|+|+|+||+||+++.|+++|++|.+|+||+.+|.+..++|+|.|.++++++.+++... .++++....+.| ++.+.
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~ 78 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNV--DARLLIGGEKVGINPKVNNL 78 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCC--cEEEEecCCcCCCCHhHHHH
Confidence 7899999999999999999999999999996653333348999999999998765421 456666555544 34566
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CCceeeecccCCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
|.|++.| .+||++++|+|+.++ |++|+.|++. +..+ + ++. |.
T Consensus 79 n~g~~~a---~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~~-~-~v~----------------~~-------------- 122 (196)
T cd02520 79 IKGYEEA---RYDILVISDSDISVP-PDYLRRMVAPLMDPGV-G-LVT----------------CL-------------- 122 (196)
T ss_pred HHHHHhC---CCCEEEEECCCceEC-hhHHHHHHHHhhCCCC-C-eEE----------------ee--------------
Confidence 7788765 699999999999997 9999999874 2211 1 110 00
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhccccccccc--CCCchhHHHHHHHHHcCeeEEEecc
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTL--NSMDYDMAFCTNLRNKGIHLKIDST 504 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~--~~~deDm~Fc~~ar~~Gi~myv~N~ 504 (734)
...+++.+++++++++ .+. |.. ....||+.||.+++++|..+.++..
T Consensus 123 ---------~~~g~~~~~r~~~~~~-~gg--f~~~~~~~~eD~~l~~rl~~~G~~i~~~~~ 171 (196)
T cd02520 123 ---------CAFGKSMALRREVLDA-IGG--FEAFADYLAEDYFLGKLIWRLGYRVVLSPY 171 (196)
T ss_pred ---------cccCceeeeEHHHHHh-ccC--hHHHhHHHHHHHHHHHHHHHcCCeEEEcch
Confidence 1113578999999997 322 321 2357999999999999999988875
No 10
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.65 E-value=6e-15 Score=164.98 Aligned_cols=206 Identities=16% Similarity=0.257 Sum_probs=144.2
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
...|+|+|+||+|||+..|.++++++.+|+||+.++.+..++|+|.|.++++++.++ ++.++++..+++.|++.|+
T Consensus 51 ~~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~----~~~v~~i~~~~n~Gka~al 126 (420)
T PRK11204 51 KEYPGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQ----IPRLRVIHLAENQGKANAL 126 (420)
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHh----CCcEEEEEcCCCCCHHHHH
Confidence 357999999999999999999999999999998666443333899999999888765 4578999888899999999
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeee----cccCCCcccccccccccCCccccchHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAP----LLVRPFKAWSNFWGALNADGFYARSFDYMN 440 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP----~l~~~~~~wsNFWgal~~~GyY~Rsedy~~ 440 (734)
|.|++.| ++||++++|||++++ |++|++|++. +..+.+- ..... .++.+.+. .+.|........
T Consensus 127 n~g~~~a---~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~~v~~v~g~~~~~~~----~~~~~~~~-~~~~~~~~~~~~ 197 (420)
T PRK11204 127 NTGAAAA---RSEYLVCIDGDALLD-PDAAAYMVEHFLHNPRVGAVTGNPRIRNR----STLLGRIQ-VGEFSSIIGLIK 197 (420)
T ss_pred HHHHHHc---CCCEEEEECCCCCCC-hhHHHHHHHHHHhCCCeEEEECCceeccc----hhHHHHHH-HHHHHHhhhHHH
Confidence 9999885 699999999999997 9999999963 4443221 11111 12222211 112222222222
Q ss_pred HHhcccCCcceeeecee-eeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 441 IINGDQGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 441 i~~~~~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
..++. .| .+..+ +++.+++++++++ . ..|......||+++|.+++++|+.+.+++... .+--.|++
T Consensus 198 ~~~~~---~~--~~~~~~G~~~~~rr~~l~~-v--gg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~-~~~~~p~t 264 (420)
T PRK11204 198 RAQRV---YG--RVFTVSGVITAFRKSALHE-V--GYWSTDMITEDIDISWKLQLRGWDIRYEPRAL-CWILMPET 264 (420)
T ss_pred HHHHH---hC--CceEecceeeeeeHHHHHH-h--CCCCCCcccchHHHHHHHHHcCCeEEeccccE-EEeECccc
Confidence 22211 12 12222 3556889999988 3 24666668899999999999999999888643 33334444
No 11
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.65 E-value=5.9e-15 Score=166.85 Aligned_cols=209 Identities=14% Similarity=0.148 Sum_probs=143.7
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
..|+|+|+||+|||+..|+++++++.+++||+.+|.+..++|+|.|.++++++.+++ +.++++..+++.|++.|+|
T Consensus 73 ~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~----~~v~vv~~~~n~Gka~AlN 148 (444)
T PRK14583 73 GHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAED----PRLRVIHLAHNQGKAIALR 148 (444)
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhC----CCEEEEEeCCCCCHHHHHH
Confidence 469999999999999999999999999999986653333338999999999887654 4688888888999999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeeecccCCC-cccccccccccCCccccchHHHHHHHhc
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLLVRPF-KAWSNFWGALNADGFYARSFDYMNIING 444 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l~~~~-~~wsNFWgal~~~GyY~Rsedy~~i~~~ 444 (734)
.|++.| ++||++++|||++++ |++|+.|++. +..+.+- ...+. .--+++.+.+. .+-|......+...++
T Consensus 149 ~gl~~a---~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~~~g~v-~g~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~ 222 (444)
T PRK14583 149 MGAAAA---RSEYLVCIDGDALLD-KNAVPYLVAPLIANPRTGAV-TGNPRIRTRSTLIGRVQ-VGEFSSIIGLIKRTQR 222 (444)
T ss_pred HHHHhC---CCCEEEEECCCCCcC-HHHHHHHHHHHHhCCCeEEE-EccceecCCCcchhhHH-HHHHHHHHHHHHHHHH
Confidence 999875 699999999999997 9999999862 4443321 11100 00122222211 0112111111111111
Q ss_pred ccCCcceeeecee-eeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCCC
Q psy14856 445 DQGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENF 516 (734)
Q Consensus 445 ~~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~~ 516 (734)
. .| .+..+ +++.+++++++++ . ..|......||++++.+++.+|+.+..++.. ..|...|+++
T Consensus 223 ~---~g--~~~~~sG~~~~~rr~al~~-v--Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a-~~~~~~p~t~ 286 (444)
T PRK14583 223 V---YG--QVFTVSGVVAAFRRRALAD-V--GYWSPDMITEDIDISWKLQLKHWSVFFEPRG-LCWILMPETL 286 (444)
T ss_pred H---hC--CceEecCceeEEEHHHHHH-c--CCCCCCcccccHHHHHHHHHcCCeEEEeecc-EEeeeCCCCH
Confidence 1 12 12222 3456899999988 3 2466666899999999999999999888844 4444556553
No 12
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.63 E-value=3.9e-15 Score=164.64 Aligned_cols=197 Identities=16% Similarity=0.237 Sum_probs=129.9
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc---HHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN---SKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g---~a~ 365 (734)
..|.|+|+||+||+++.|+++|+|+.+|+||+.+|.+.+++|+|.|.++++++.++++. ..|+++..+++.| +..
T Consensus 39 ~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~--~~i~~v~~~~~~G~~~K~~ 116 (373)
T TIGR03472 39 AWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPD--ADIDLVIDARRHGPNRKVS 116 (373)
T ss_pred CCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCC--CceEEEECCCCCCCChHHH
Confidence 47999999999999999999999999999999666442334888899999998876543 2477776655554 333
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--C--Cceeeeccc-CCCcccccccccccCCccccchHHHHH
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--N--ESLIAPLLV-RPFKAWSNFWGALNADGFYARSFDYMN 440 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--n--k~IVaP~l~-~~~~~wsNFWgal~~~GyY~Rsedy~~ 440 (734)
+.+.+++. +++||++++|||+++. |+.|+.+++. + ..+|+.... .+. .+||..+..... ...|+.
T Consensus 117 ~l~~~~~~---a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~v~~V~~~~~~~~~---~~~~~~l~~~~~---~~~~~~ 186 (373)
T TIGR03472 117 NLINMLPH---ARHDILVIADSDISVG-PDYLRQVVAPLADPDVGLVTCLYRGRPV---PGFWSRLGAMGI---NHNFLP 186 (373)
T ss_pred HHHHHHHh---ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCCcceEeccccCCCC---CCHHHHHHHHHh---hhhhhH
Confidence 33334444 5799999999999997 9999999974 2 234443321 111 234432210000 112222
Q ss_pred HH-hcccCCcceeeeceeeeEEeeehhhHhhccccccccc--CCCchhHHHHHHHHHcCeeEEEec
Q psy14856 441 II-NGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTL--NSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 441 i~-~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~--~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
.. .... .|. .....+++++++|+++++ .+. |.. ..+.||..++.+++++|..+.++.
T Consensus 187 ~~~~~~~--~~~-~~~~~G~~~a~RR~~l~~-iGG--f~~~~~~~~ED~~l~~~i~~~G~~v~~~~ 246 (373)
T TIGR03472 187 SVMVARA--LGR-ARFCFGATMALRRATLEA-IGG--LAALAHHLADDYWLGELVRALGLRVVLAP 246 (373)
T ss_pred HHHHHHh--ccC-CccccChhhheeHHHHHH-cCC--hHHhcccchHHHHHHHHHHHcCCeEEecc
Confidence 11 0111 111 112345677899999998 433 432 346799999999999999998875
No 13
>KOG1971|consensus
Probab=99.63 E-value=3.2e-16 Score=169.35 Aligned_cols=189 Identities=15% Similarity=0.198 Sum_probs=154.2
Q ss_pred hhhccchHHHhhhCCC------CCCCCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeee
Q psy14856 536 DLRYIHPEYQKSLLPD------TVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHM 609 (734)
Q Consensus 536 ~e~yihp~y~~~~~~~------~~~~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~ 609 (734)
++.++-|+++.....+ ....++.|.+|.+|+|.+.||+++.+++|++++|+..+..+.+ . =.++..+.+..
T Consensus 124 p~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r~~~~dad~~i~--~-P~~~~~li~~~ 200 (415)
T KOG1971|consen 124 PENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFRKFSVDADFVIT--R-PNTLRNLIVLN 200 (415)
T ss_pred HHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhhhcccccceecc--C-ChhHHHHHHHh
Confidence 5556666666665543 2357899999999999999999999999999999876633222 0 02456677777
Q ss_pred ecc--chHHHHHHHHHHhhchhhh---------------------hhhcCCCCCCCCCcceeEEEEc-CCCCCCCCcccc
Q psy14856 610 KQV--GLAGVWAEFLRKYVVPLQE---------------------REFIGYHHEPVRAPMSFVVRYR-PDEQPSLRPHHD 665 (734)
Q Consensus 610 ~~~--g~~~~~~~~l~~~v~P~~~---------------------~~f~~~~~~~l~~~~~fvvrY~-~~~~~~l~~H~D 665 (734)
+++ ++..+..++..++..|+++ -.||..++..+++++.|++.|. .+.++.+++|.|
T Consensus 201 k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~vg~~~~P~v~~~yl~~~~~f~~e~~~~~~Dpdm~~~~~ 280 (415)
T KOG1971|consen 201 KEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNRVGVWNVPYVCGAYLDSHDAFRVESSEDNRDPDMGFCVD 280 (415)
T ss_pred hhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccceeEEeecccceeEEecccceeeeccCcCCCCccccccc
Confidence 887 8888888888888999998 7888777777899999999995 459999999999
Q ss_pred CCceEEEEEecCCCCcCCCccEEEeecccee------------ecccceeEEEeCCCcccccCcccCCcee-EEEEEeee
Q psy14856 666 SSTYTINIALNQVGVDYEGGGCRFIRYNCNV------------TATRMGWMLMHPGRLTHYHEGLQVTQGT-RYIMISFV 732 (734)
Q Consensus 666 ~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v------------~~~~~G~al~h~g~lth~H~g~~vT~G~-Ryilv~F~ 732 (734)
+++.|+|+||++ .|+||.+.|.+..|.. +.+.+|++++|+|. |.|++.++++|. |-+++.|-
T Consensus 281 ~~e~~l~v~l~n---q~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h~p~qa~LHrg~--~~~~a~~~~~~~~~~nv~~~~ 355 (415)
T KOG1971|consen 281 AREVGLFVCLSN---QFEGGELLFTGKYCTKHLRTDDLWEIFDNSHDPGQAYLHRGY--HKHGARATIVGQPCPNVYWFP 355 (415)
T ss_pred hhhcceeEEecc---cccCCeeEeeccccccccCCCchhhhccCcCCCccceecCcc--hhccccccCCCCCCCceeeeh
Confidence 999999999999 9999999998876653 34679999999998 899999999998 77777663
No 14
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.62 E-value=7e-15 Score=166.07 Aligned_cols=212 Identities=17% Similarity=0.198 Sum_probs=142.4
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
...|+|+|+||+||++..|++++++|.+|+||+++++++|. | |+|.|.++++++.++. +.++++..+++.|++.
T Consensus 46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~----~~v~v~~~~~~~Gka~ 121 (439)
T TIGR03111 46 GKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEF----PGLSLRYMNSDQGKAK 121 (439)
T ss_pred CCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhC----CCeEEEEeCCCCCHHH
Confidence 46799999999999999999999999999999988876554 4 8999999998877654 4667766667789999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCcee--eecc-cCCCc--ccccccccc-cCCccccchH
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLI--APLL-VRPFK--AWSNFWGAL-NADGFYARSF 436 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IV--aP~l-~~~~~--~wsNFWgal-~~~GyY~Rse 436 (734)
|+|.|++.+ ++||++++|||++++ |+.|+++++. +..+. ++.. ..++. --.+.|... ...++ .
T Consensus 122 AlN~gl~~s---~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~----~ 193 (439)
T TIGR03111 122 ALNAAIYNS---IGKYIIHIDSDGKLH-KDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEY----F 193 (439)
T ss_pred HHHHHHHHc---cCCEEEEECCCCCcC-hHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHH----H
Confidence 999999875 699999999999996 9999999963 44443 2322 21110 001111111 01111 1
Q ss_pred HHHHHHhcccCCcceee-eceee-eEEeeehhhHhhcccccccccCCCchhHHHHHHHHH-cCeeEEEecccceEEeecc
Q psy14856 437 DYMNIINGDQGGKGIWN-VPYIT-NCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRN-KGIHLKIDSTQEYGHLVDS 513 (734)
Q Consensus 437 dy~~i~~~~~~~~G~~n-VP~v~-~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~-~Gi~myv~N~~~~G~l~~~ 513 (734)
+|....-..+...+..+ +..++ ++.+++|+++.+ .+ .|......||++++.+++. .|..++++....+.+-. |
T Consensus 194 ~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~-vg--gf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~-p 269 (439)
T TIGR03111 194 EYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK-TQ--LYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDP-I 269 (439)
T ss_pred HHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH-hC--CCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEEC-C
Confidence 22111100000011111 11223 344789999987 32 4666678999999999975 69999999877776533 4
Q ss_pred CC
Q psy14856 514 EN 515 (734)
Q Consensus 514 ~~ 515 (734)
++
T Consensus 270 ~t 271 (439)
T TIGR03111 270 DG 271 (439)
T ss_pred cC
Confidence 44
No 15
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.61 E-value=2.1e-14 Score=146.84 Aligned_cols=201 Identities=16% Similarity=0.240 Sum_probs=133.2
Q ss_pred EEEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEec-CCCCcH-HHHHHHHHHhccCcceEEEEeCCCCCc-HHHHHHH
Q psy14856 294 LISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVYN-NQEYHA-PLFDDYIHNFKTMFKNVKYIAHNSTVN-SKEARNL 369 (734)
Q Consensus 294 ~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~-~il~~f~~~~~~~y~~V~ii~~~~~~g-~a~arN~ 369 (734)
+|+||+||++ ..|+++|++|.+|+||+.+| ++|+| |+|.|. +.++++.++.. ..++++..+++.| ++.|+|.
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~ei-iVvdd~s~D~t~~~~i~~~~~~~~---~~i~~i~~~~~~G~~~~a~n~ 76 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEV-IVIDNNTKDEALWKPVEAHCAQLG---ERFRFFHVEPLPGAKAGALNY 76 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEE-EEEeCCCCchhHHHHHHHHHHHhC---CcEEEEEcCCCCCCchHHHHH
Confidence 5899999998 69999999999999999776 34454 888875 77777776543 2567777776777 4899999
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CC--ceeeecc-cCCCcccccccccccCCccccchHHHHHH--H
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NE--SLIAPLL-VRPFKAWSNFWGALNADGFYARSFDYMNI--I 442 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk--~IVaP~l-~~~~~~wsNFWgal~~~GyY~Rsedy~~i--~ 442 (734)
|++.|. .++||++++|+|++++ |++|+.|++. +. .+|++.. ...+. .++|. ...|.-...+... .
T Consensus 77 g~~~a~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~v~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 148 (236)
T cd06435 77 ALERTA-PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPRVGFVQAPQDYRDGE--ESLFK----RMCYAEYKGFFDIGMV 148 (236)
T ss_pred HHHhcC-CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCCeeEEecCccccCCC--ccHHH----HHHhHHHHHHHHHHhc
Confidence 999874 3589999999999998 9999999963 22 3333221 11100 00110 0111111111111 1
Q ss_pred hcccCCcceeeeceee-eEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 443 NGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 443 ~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
.+.. . ++...+ ++.+++++++++ .+ .|......||+.||.+++++|+.+..++. ..+|-..|++
T Consensus 149 ~~~~--~---~~~~~~g~~~~~rr~~~~~-iG--gf~~~~~~eD~dl~~r~~~~G~~~~~~~~-~~~~~~~~~~ 213 (236)
T cd06435 149 SRNE--R---NAIIQHGTMCLIRRSALDD-VG--GWDEWCITEDSELGLRMHEAGYIGVYVAQ-SYGHGLIPDT 213 (236)
T ss_pred cccc--c---CceEEecceEEEEHHHHHH-hC--CCCCccccchHHHHHHHHHCCcEEEEcch-hhccCcCccc
Confidence 1111 1 223333 456899999998 42 36655678999999999999999999875 4455444443
No 16
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.61 E-value=1.6e-14 Score=155.32 Aligned_cols=211 Identities=19% Similarity=0.294 Sum_probs=153.7
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
.|.|+++|+.||+.+.+.+||.+|.++.||.+.+. .++| |+|.+.+.+++-. ++.|+++...+|.|.|.|-|
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv-~vDn~s~d~~~~~~~~~~------~~~v~~i~~~~NlG~agg~n 74 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIV-VVDNGSTDGSLEALKARF------FPNVRLIENGENLGFAGGFN 74 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEE-EccCCCCCCCHHHHHhhc------CCcEEEEEcCCCccchhhhh
Confidence 48899999999999999999999999999998875 5666 8999998887532 68999999999999999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc-----CCceeeeccc-CCCcccccccccccCCcc--ccchHHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR-----NESLIAPLLV-RPFKAWSNFWGALNADGF--YARSFDYMN 440 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~-----nk~IVaP~l~-~~~~~wsNFWgal~~~Gy--Y~Rsedy~~ 440 (734)
.|++.|.+..++|+++++-|+++. |++|..|++. ...++.|.+. ..++.+.+-.++ ...+. ..+.....+
T Consensus 75 ~g~~~a~~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 152 (305)
T COG1216 75 RGIKYALAKGDDYVLLLNPDTVVE-PDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGG-ESDGLTGGWRASPLLE 152 (305)
T ss_pred HHHHHHhcCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheecc-ccccccccceeccccc
Confidence 999999866566999999999997 9999999963 2234445442 222222222221 00000 011111111
Q ss_pred HHhcccCCcceeeec-eeeeEEeeehhhHhhcccc---cccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 441 IINGDQGGKGIWNVP-YITNCYLMKTSVIKATNIK---TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 441 i~~~~~~~~G~~nVP-~v~~~~LI~~~vL~~~~~~---~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
+..... .-...++ ..++|.||+++++++ .+. ..|. +.||.++|.|||++|+++++++....=|....++
T Consensus 153 ~~~~~~--~~~~~~~~~~G~~~li~~~~~~~-vG~~de~~F~---y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~ 225 (305)
T COG1216 153 IAPDLS--SYLEVVASLSGACLLIRREAFEK-VGGFDERFFI---YYEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSK 225 (305)
T ss_pred cccccc--chhhhhhhcceeeeEEcHHHHHH-hCCCCcccce---eehHHHHHHHHHHcCCeEEEeeccEEEEeccCCC
Confidence 111000 1111233 456788999999998 543 4454 7899999999999999999999999999988877
No 17
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.61 E-value=5.8e-15 Score=150.06 Aligned_cols=200 Identities=17% Similarity=0.253 Sum_probs=118.7
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc---HHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN---SKEAR 367 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g---~a~ar 367 (734)
|+|+|+||++|+...|.++|++|++++||+.++.+..+.++|.+.+.++++.++++.. .++++....+.+ ++.++
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~--~v~vi~~~~~~g~~~k~~a~ 78 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRV--RVRVIRRPRNPGPGGKARAL 78 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG---GEEEEE----HHHHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCC--ceEEeecCCCCCcchHHHHH
Confidence 7899999999999999999999999999885554433337888888899888776532 467777665554 67788
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecc-cCCCcccccccccccCCccccchHHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL-VRPFKAWSNFWGALNADGFYARSFDYMNII 442 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l-~~~~~~wsNFWgal~~~GyY~Rsedy~~i~ 442 (734)
|.|++.+ ++||++++|+|+++. |++|+.+++. +..+|.+.. ..+++ ++|..+....++.....+ .
T Consensus 79 n~~~~~~---~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~ 148 (228)
T PF13641_consen 79 NEALAAA---RGDYILFLDDDTVLD-PDWLERLLAAFADPGVGAVGGPVFPDNDR---NWLTRLQDLFFARWHLRF---R 148 (228)
T ss_dssp HHHHHH------SEEEEE-SSEEE--CHHHHHHHHHHHBSS--EEEEEEEETTCC---CEEEE-TT--S-EETTTS----
T ss_pred HHHHHhc---CCCEEEEECCCcEEC-HHHHHHHHHHHHhCCCCeEeeeEeecCCC---CHHHHHHHHHHhhhhhhh---h
Confidence 8888875 599999999999996 9999999864 334444433 33332 223222111111111111 1
Q ss_pred hcccCCcceeeece-eeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEE
Q psy14856 443 NGDQGGKGIWNVPY-ITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGH 509 (734)
Q Consensus 443 ~~~~~~~G~~nVP~-v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~ 509 (734)
.... .+.+++ .+++.+++++++++ .+ .|+.....||..||.+++++|+.+.+++....=|
T Consensus 149 ~~~~----~~~~~~~~G~~~~~rr~~~~~-~g--~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~ 209 (228)
T PF13641_consen 149 SGRR----ALGVAFLSGSGMLFRRSALEE-VG--GFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYH 209 (228)
T ss_dssp TT-B--------S-B--TEEEEEHHHHHH-H---S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE
T ss_pred hhhc----ccceeeccCcEEEEEHHHHHH-hC--CCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEE
Confidence 1111 123443 45799999999998 32 2544557799999999999999999998554333
No 18
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.60 E-value=3.4e-14 Score=146.69 Aligned_cols=192 Identities=17% Similarity=0.306 Sum_probs=136.2
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
+..|+|+|+||++|++..|+++|+++.+++||+.+.+++|. + |+|.|.++++++.++ .++++..+++.|.+.
T Consensus 26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~------~v~~i~~~~~~g~~~ 99 (251)
T cd06439 26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK------GVKLLRFPERRGKAA 99 (251)
T ss_pred CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC------cEEEEEcCCCCChHH
Confidence 46799999999999999999999999999999976664443 4 889999999887643 588888888999999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeeccc--CCCcccccccccccCCccccchHHHH
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLV--RPFKAWSNFWGALNADGFYARSFDYM 439 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~--~~~~~wsNFWgal~~~GyY~Rsedy~ 439 (734)
|+|.|++.| .+||++++|+|++++ |+.|+.|++. +..++++-.. .+.. .......+++....+
T Consensus 100 a~n~gi~~a---~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 168 (251)
T cd06439 100 ALNRALALA---TGEIVVFTDANALLD-PDALRLLVRHFADPSVGAVSGELVIVDGGG-------SGSGEGLYWKYENWL 168 (251)
T ss_pred HHHHHHHHc---CCCEEEEEccccCcC-HHHHHHHHHHhcCCCccEEEeEEEecCCcc-------cchhHHHHHHHHHHH
Confidence 999999886 579999999999998 9999999974 2234444221 1110 000112233333333
Q ss_pred HHHhcccCCcceeeeceeee-EEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccce
Q psy14856 440 NIINGDQGGKGIWNVPYITN-CYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEY 507 (734)
Q Consensus 440 ~i~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~ 507 (734)
...... .+ .+...++ +++++++++.. |......||+.|+.+++++|..+.+.+....
T Consensus 169 ~~~~~~---~~--~~~~~~g~~~~~rr~~~~~------~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~ 226 (251)
T cd06439 169 KRAESR---LG--STVGANGAIYAIRRELFRP------LPADTINDDFVLPLRIARQGYRVVYEPDAVA 226 (251)
T ss_pred HHHHHh---cC--CeeeecchHHHhHHHHhcC------CCcccchhHHHHHHHHHHcCCeEEeccccEE
Confidence 222211 12 2233343 44588888874 3344568999999999999998877765544
No 19
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.60 E-value=1.5e-14 Score=146.94 Aligned_cols=196 Identities=16% Similarity=0.243 Sum_probs=132.6
Q ss_pred CcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc-HHHH
Q psy14856 291 PSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN-SKEA 366 (734)
Q Consensus 291 P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g-~a~a 366 (734)
|+|+|+||+||++ ..|+++|+||.+|+||+++++|+|. + |+|.|.++++++..+ + .++++....+.+ ++.+
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 75 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVE----Y-GYRYLTRPDNRHAKAGN 75 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcc----c-CceEEEeCCCCCCcHHH
Confidence 7899999999986 5899999999999999965554444 4 788888888877543 2 456665555555 5778
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--C-Cc--eeeecc-c-CCCcccccccccccCCccccchHHHH
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--N-ES--LIAPLL-V-RPFKAWSNFWGALNADGFYARSFDYM 439 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--n-k~--IVaP~l-~-~~~~~wsNFWgal~~~GyY~Rsedy~ 439 (734)
+|.|++.| ++||++++|+|++++ |++|+.|++. + .. ++++.. . ...... |.. ..+......|.
T Consensus 76 ~n~~~~~a---~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~---~~~~~~~~~~~ 145 (234)
T cd06421 76 LNNALAHT---TGDFVAILDADHVPT-PDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFD---WLA---DGAPNEQELFY 145 (234)
T ss_pred HHHHHHhC---CCCEEEEEccccCcC-ccHHHHHHHHHhcCCCeEEEecceEEecCCcch---hHH---HHHHHHHHHHH
Confidence 89999875 799999999999997 9999999973 2 32 333221 1 111000 000 01111112222
Q ss_pred HHHhcccCCcceeeeceee-eEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccce
Q psy14856 440 NIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEY 507 (734)
Q Consensus 440 ~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~ 507 (734)
...... ...+++.+++ ++.+++++++++ .+ .|....+.||+.||.+++++|+.+...+....
T Consensus 146 ~~~~~~---~~~~~~~~~~g~~~~~r~~~~~~-ig--~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 146 GVIQPG---RDRWGAAFCCGSGAVVRREALDE-IG--GFPTDSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHH---HhhcCCceecCceeeEeHHHHHH-hC--CCCccceeccHHHHHHHHHcCceEEEecCccc
Confidence 222211 2224555554 477899999998 32 36556678999999999999999888775543
No 20
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.58 E-value=6.7e-14 Score=152.38 Aligned_cols=208 Identities=12% Similarity=0.205 Sum_probs=144.3
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
..|+|+|+||+||++.+|+++|+||.+|+|++.+|.+..+.|+|.|.++++++.++ ++.|+++.. +|.|.+.|||
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~----~~~i~vi~~-~n~G~~~arN 78 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAEN----YPHVRLLHQ-ANAGVSVARN 78 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhh----CCCEEEEEC-CCCChHHHHH
Confidence 35899999999999999999999999999998776443334999999999998865 357888864 5899999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeee--c-c-cCCCccccccccc-ccCCccccchHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAP--L-L-VRPFKAWSNFWGA-LNADGFYARSFDYM 439 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP--~-l-~~~~~~wsNFWga-l~~~GyY~Rsedy~ 439 (734)
.|++.| ++||++|+|+|..+. |+.|+.|++. +.+++.- - . ...+.....+... +...+.+ ...+++
T Consensus 79 ~gl~~a---~g~yi~flD~DD~~~-p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 153 (328)
T PRK10073 79 TGLAVA---TGKYVAFPDADDVVY-PTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVL-SGPDWL 153 (328)
T ss_pred HHHHhC---CCCEEEEECCCCccC-hhHHHHHHHHHHhCCCCEEEEccEEEEeCCCcccccccccccccccee-chHHHH
Confidence 999886 699999999999998 9999999863 2344321 1 1 1111111111000 0111111 122333
Q ss_pred HH-HhcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 440 NI-INGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 440 ~i-~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
.. +...+ .+.+....+++++++++ .. ..|..+...||+.|..++-.++-.+++.++..|-|.+.+..
T Consensus 154 ~~~l~~~~-------~~~~~~~~l~Rr~~l~~-~~-~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly~Yr~~~~S 221 (328)
T PRK10073 154 RMALSSRR-------WTHVVWLGVYRRDFIVK-NN-IKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLYKYYLHDTS 221 (328)
T ss_pred HHHHhhCC-------CCccHhHHHHHHHHHHH-cC-CccCCCCEeccHHHHHHHHHHCCEEEEECCCEEEEEecCCc
Confidence 32 22111 01111124789999986 22 34655556799999999999999999999999999987765
No 21
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.58 E-value=6.6e-14 Score=139.81 Aligned_cols=169 Identities=17% Similarity=0.190 Sum_probs=128.1
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVEN 373 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~ 373 (734)
|+||+||++..|+++|+||.++.||..+|. ++++ |+|.|.++++++.++ + .++++..+++.|.+.++|.|++.
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eii-ivD~~s~d~t~~~~~~~~~~----~-~i~~~~~~~n~g~~~~~n~~~~~ 74 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHII-VIDNASTDGTAEWLTSLGDL----D-NIVYLRLPENLGGAGGFYEGVRR 74 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEE-EEECCCCcchHHHHHHhcCC----C-ceEEEECccccchhhHHHHHHHH
Confidence 579999999999999999999999987763 3444 899999888876543 2 27888888999999999999999
Q ss_pred hhhcCccEEEEECCCccCCChHHHHHHHHcCC----ceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCc
Q psy14856 374 SLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNE----SLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGK 449 (734)
Q Consensus 374 a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk----~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~ 449 (734)
|.+.++||++++|+|+++. |+.|+.|++.-+ .+++|.... . .
T Consensus 75 a~~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~-------------~--------------------~ 120 (202)
T cd04185 75 AYELGYDWIWLMDDDAIPD-PDALEKLLAYADKDNPQFLAPLVLD-------------P--------------------D 120 (202)
T ss_pred HhccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCCceEecceeEc-------------C--------------------C
Confidence 9877899999999999997 999999997422 222221110 0 1
Q ss_pred ceeeeceeeeEEeeehhhHhhccccccccc--CCCchhHHHHHHHHHcCeeEEEecccceEEeecc
Q psy14856 450 GIWNVPYITNCYLMKTSVIKATNIKTIYTL--NSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDS 513 (734)
Q Consensus 450 G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~--~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~ 513 (734)
| ..++.+++++++++ .+- |.. ..+.||..||.+++++|..+ .++....-|....
T Consensus 121 ~------~~~~~~~~~~~~~~-~g~--~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~ 176 (202)
T cd04185 121 G------SFVGVLISRRVVEK-IGL--PDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAI 176 (202)
T ss_pred C------ceEEEEEeHHHHHH-hCC--CChhhhccchHHHHHHHHHHcCCcE-EecceEEEEcccc
Confidence 1 12457899999997 321 221 13679999999999999999 5555665555444
No 22
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.57 E-value=2.2e-14 Score=142.80 Aligned_cols=187 Identities=13% Similarity=0.139 Sum_probs=130.2
Q ss_pred EEEEEecCCh--hHHHHHHHHHHcccCCCceEEEEEec-C-CCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 294 LISVFIDKPT--AFLEEFLNKIANLNYPAKKISMFVYN-N-QEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 294 ~I~I~i~n~~--~~L~~fL~sL~~LdYPk~ri~l~I~n-s-~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
+|+||++|++ .+|+++|+||.+|+||..++ |+|++ | +|.|.++++++.++. + ++++..++|.|.+.|+|.
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~~~~~~~~~~~----~-i~~i~~~~n~G~~~a~N~ 74 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEV-VLVKDGPVTQSLNEVLEEFKRKL----P-LKVVPLEKNRGLGKALNE 74 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEE-EEEECCCCchhHHHHHHHHHhcC----C-eEEEEcCccccHHHHHHH
Confidence 5899999987 49999999999999998776 44444 4 788888888887643 3 888888889999999999
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CC--ceeeecccC-CCcccccccccccCCccccchHHHHHHHh
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NE--SLIAPLLVR-PFKAWSNFWGALNADGFYARSFDYMNIIN 443 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk--~IVaP~l~~-~~~~wsNFWgal~~~GyY~Rsedy~~i~~ 443 (734)
|++.| ++||++++|+|.+++ |+.|+.+++. +. .++.+-+.. ... ....+....+. ...+.....
T Consensus 75 g~~~a---~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~- 144 (201)
T cd04195 75 GLKHC---TYDWVARMDTDDISL-PDRFEKQLDFIEKNPEIDIVGGGVLEFDSD-GNDIGKRRLPT----SHDDILKFA- 144 (201)
T ss_pred HHHhc---CCCEEEEeCCccccC-cHHHHHHHHHHHhCCCeEEEcccEEEECCC-CCeeccccCCC----CHHHHHHHh-
Confidence 99875 699999999999998 9999999974 22 233332210 000 00000000000 011111111
Q ss_pred cccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccc
Q psy14856 444 GDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQE 506 (734)
Q Consensus 444 ~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~ 506 (734)
.+..|+.+.+.+++++++++ .+ .|......||+.|+.++.++|..++..+...
T Consensus 145 -------~~~~~~~~~~~~~rr~~~~~-~g--~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~ 197 (201)
T cd04195 145 -------RRRSPFNHPTVMFRKSKVLA-VG--GYQDLPLVEDYALWARMLANGARFANLPEIL 197 (201)
T ss_pred -------ccCCCCCChHHhhhHHHHHH-cC--CcCCCCCchHHHHHHHHHHcCCceecccHHH
Confidence 12235566778999999987 32 3555578999999999999999888776543
No 23
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.57 E-value=7.6e-14 Score=155.99 Aligned_cols=209 Identities=16% Similarity=0.185 Sum_probs=151.5
Q ss_pred CCcEEEEEEecCChh-HHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeC-CCCCcHHHHH
Q psy14856 290 FPSVLISVFIDKPTA-FLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAH-NSTVNSKEAR 367 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~-~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~-~~~~g~a~ar 367 (734)
.|+|+|.||+|||++ +++++++++.+||||+.++.+..++++|.+.+++++...+.+ +.++++.. .++.|++.|-
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYG---PNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcC---cceEEEeccccCccchHHH
Confidence 499999999999999 999999999999999966644444488999998888777654 45666644 5678899999
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CCceeeecccCCC---ccc-ccccccccCCccccchHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NESLIAPLLVRPF---KAW-SNFWGALNADGFYARSFDYMNI 441 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk~IVaP~l~~~~---~~w-sNFWgal~~~GyY~Rsedy~~i 441 (734)
|.|+..+ ++|+++++|||.+++ ||.|++++.. +.+.+ .+...+. +.+ +|+|+.+.. -.|....-+...
T Consensus 130 ~~~l~~~---~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~~~-~v~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 203 (439)
T COG1215 130 NNGLKRA---KGDVVVILDADTVPE-PDALRELVSPFEDPPVG-AVVGTPRIRNRPDPSNLLGRIQA-IEYLSAFYFRLR 203 (439)
T ss_pred HHHHhhc---CCCEEEEEcCCCCCC-hhHHHHHHhhhcCCCee-EEeCCceeeecCChhhhcchhcc-hhhhhhHHHhhh
Confidence 9999886 499999999999998 9999999974 33333 2222211 001 567765521 122332222222
Q ss_pred HhcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 442 INGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 442 ~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
.. .+ .| .....-+++.++++++|++ .+ .+......||.+++.++..+|+...+.+.. ..+-..|++
T Consensus 204 ~~-~~--~g-~~~~~~G~~~~~rr~aL~~-~g--~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~-~~~~~~p~t 269 (439)
T COG1215 204 AA-SK--GG-LISFLSGSSSAFRRSALEE-VG--GWLEDTITEDADLTLRLHLRGYRVVYVPEA-IVWTEAPET 269 (439)
T ss_pred hh-hh--cC-CeEEEcceeeeEEHHHHHH-hC--CCCCCceeccHHHHHHHHHCCCeEEEeecc-eEeeeCccc
Confidence 22 22 34 3445556788999999998 32 466778999999999999999999999865 555566665
No 24
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.54 E-value=1.1e-13 Score=137.50 Aligned_cols=190 Identities=15% Similarity=0.195 Sum_probs=127.9
Q ss_pred CcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEec-CCCCcHH-HHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 291 PSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAP-LFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 291 P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~-il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
|+|+|+||++|++ ..|+++|+||.++.||..+|. +|++ |+|.+.+ +++++.++ ++.++++..+++.|.+.|+
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eii-vvd~gs~d~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~a~ 75 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELC-IADDASTDPEVKRVLKKYAAQ----DPRIKVVFREENGGISAAT 75 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEE-EEeCCCCChHHHHHHHHHHhc----CCCEEEEEcccCCCHHHHH
Confidence 6899999999999 999999999999999987663 3444 7787654 44444433 3568888888899999999
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CC--ceeeecccCCCcccccccccccCCccccchHHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NE--SLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNII 442 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk--~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~ 442 (734)
|.|++.| .+||++++|+|..++ |+.|+.+++. +. .++.+-..... .+ +.... ..+......
T Consensus 76 n~g~~~a---~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~~~~v~~~~~~~~---~~--~~~~~-~~~~~~~~~---- 141 (202)
T cd04184 76 NSALELA---TGEFVALLDHDDELA-PHALYEVVKALNEHPDADLIYSDEDKID---EG--GKRSE-PFFKPDWSP---- 141 (202)
T ss_pred HHHHHhh---cCCEEEEECCCCcCC-hHHHHHHHHHHHhCCCCCEEEccHHhcc---CC--CCEec-cccCCCCCH----
Confidence 9999886 589999999999997 9999999963 22 23322110000 00 00000 000000000
Q ss_pred hcccCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEecccceE
Q psy14856 443 NGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKIDSTQEYG 508 (734)
Q Consensus 443 ~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~N~~~~G 508 (734)
...+...++++..+++++++.+ .+ .|... ...||..||.+++++|..+...++..|-
T Consensus 142 ------~~~~~~~~~~~~~~~~r~~~~~-ig--gf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 142 ------DLLLSQNYIGHLLVYRRSLVRQ-VG--GFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred ------HHhhhcCCccceEeEEHHHHHH-hC--CCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 0111123445667899999987 32 24322 2579999999999999998887765543
No 25
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=99.54 E-value=8.4e-14 Score=145.69 Aligned_cols=128 Identities=19% Similarity=0.402 Sum_probs=110.2
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEE-EEec-CC--CCcHHHHHHHHHHhc------cCcceEEEEeC
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISM-FVYN-NQ--EYHAPLFDDYIHNFK------TMFKNVKYIAH 357 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~--D~t~~il~~f~~~~~------~~y~~V~ii~~ 357 (734)
...|+|+|++|++|.++++++|++.|.+|+||+..|.| |+.+ +. |.+.+.+++.+++.+ ..|++|.|+..
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~ 101 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRK 101 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcC
Confidence 35689999999999999999999999999999999997 5554 66 888999998887654 46889999865
Q ss_pred CCCC--c------------------HHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCceeeecccCC
Q psy14856 358 NSTV--N------------------SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRP 415 (734)
Q Consensus 358 ~~~~--g------------------~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~~~ 415 (734)
+-.. + -|.|||..+-.|++.+.+|++++|||++.+.|+.|+.|++.+|+||+|.+.++
T Consensus 102 df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~~~kdIivPn~~~~ 179 (269)
T PF03452_consen 102 DFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIAHDKDIIVPNCWRR 179 (269)
T ss_pred CCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHhCCCCEEccceeec
Confidence 3221 1 27999999999998899999999999999999999999999999999988543
No 26
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.52 E-value=3.8e-13 Score=139.41 Aligned_cols=201 Identities=10% Similarity=0.085 Sum_probs=135.0
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcc--cCCCceEEEE-Eec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANL--NYPAKKISMF-VYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~L--dYPk~ri~l~-I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~ 363 (734)
...|+|+|+||+||++..|+.++++|.++ +++. ++|+ |++ |+|.|.++++++.++++ ...+.++....+.|.
T Consensus 6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~--~eiivvDdgS~D~t~~i~~~~~~~~~--~~~v~~~~~~~n~G~ 81 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKD--FEIIVVDDGSPDGTQDVVKQLQKVYG--EDRILLRPRPGKLGL 81 (243)
T ss_pred CCCceEEEEEccCCchhhHHHHHHHHHHHhccCCC--eEEEEEeCCCCCCHHHHHHHHHHhcC--CCcEEEEecCCCCCH
Confidence 34689999999999999999999999764 3344 4543 444 99999999999887654 236888888889999
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCcccccccccccCCc--cccchHH
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFKAWSNFWGALNADG--FYARSFD 437 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~~wsNFWgal~~~G--yY~Rsed 437 (734)
+.|+|.|++.| ++||++++|+|..++ |+.|..|++. +..+|.+.....+ +.. .+ ++.+...
T Consensus 82 ~~a~n~g~~~a---~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~v~g~r~~~~-------~~~--~~~~~~r~~~~ 148 (243)
T PLN02726 82 GTAYIHGLKHA---SGDFVVIMDADLSHH-PKYLPSFIKKQRETGADIVTGTRYVKG-------GGV--HGWDLRRKLTS 148 (243)
T ss_pred HHHHHHHHHHc---CCCEEEEEcCCCCCC-HHHHHHHHHHHHhcCCcEEEEccccCC-------CCc--CCccHHHHHHH
Confidence 99999999875 699999999999996 9999999963 3445444221111 000 11 1111111
Q ss_pred H-HHHHhcccCCcceeeece-eeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEe
Q psy14856 438 Y-MNIINGDQGGKGIWNVPY-ITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHL 510 (734)
Q Consensus 438 y-~~i~~~~~~~~G~~nVP~-v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l 510 (734)
. ...+.... .+. .++. .+++.++++++++. ... ......+..|+.+|.+|+.+|+.+...+.....|.
T Consensus 149 ~~~~~~~~~~--~~~-~~~d~~g~~~~~rr~~~~~-i~~-~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~ 218 (243)
T PLN02726 149 RGANVLAQTL--LWP-GVSDLTGSFRLYKRSALED-LVS-SVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRV 218 (243)
T ss_pred HHHHHHHHHH--hCC-CCCcCCCcccceeHHHHHH-HHh-hccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCC
Confidence 1 11111111 111 2233 33566899999997 321 22234567789999999999999988875544443
No 27
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.52 E-value=2.9e-13 Score=154.59 Aligned_cols=203 Identities=14% Similarity=0.180 Sum_probs=141.9
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHH-HcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe--CCCCCcHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKI-ANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA--HNSTVNSK 364 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL-~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~--~~~~~g~a 364 (734)
.+.|+|+|+||+|||+.+|+++++++ .++|||+.+|.+..+.|+|.|.+.+++...++ +.++++. .....+|+
T Consensus 63 ~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~----p~v~~vv~~~~gp~~Ka 138 (504)
T PRK14716 63 VPEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARY----PRVHLVIVPHDGPTSKA 138 (504)
T ss_pred CCCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHC----CCeEEEEeCCCCCCCHH
Confidence 35799999999999999999999985 68999987665444458999999999887665 4455433 22335689
Q ss_pred HHHHHHHHhhhh---cC---ccEEEEECCCccCCChHHHHHHHHc--CCceee-ecccCCCcccccccccccCCccccc-
Q psy14856 365 EARNLAVENSLH---KG---VDFYFYVDSDSHLDNPDVLKYLVNR--NESLIA-PLLVRPFKAWSNFWGALNADGFYAR- 434 (734)
Q Consensus 365 ~arN~al~~a~~---~~---~DYlf~vDAD~~L~np~tL~~LI~~--nk~IVa-P~l~~~~~~wsNFWgal~~~GyY~R- 434 (734)
.|.|.|++.+++ .. +||++++|||++++ |++|+.+... +..+|. |++... .. .++|.+ |-|..
T Consensus 139 ~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~~~~VQ~pv~~~~-~~-~~~~~a----g~y~~e 211 (504)
T PRK14716 139 DCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPRHDFVQLPVFSLP-RD-WGEWVA----GTYMDE 211 (504)
T ss_pred HHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCCCCEEecceeccC-Cc-hhHHHH----HHHHHH
Confidence 999999986632 23 49999999999998 9999987653 444444 555322 11 233432 22221
Q ss_pred -hHHHHH-HHhcccCCcceeeeceeeeEEeeehhhHhhcccc---c-ccccCCCchhHHHHHHHHHcCeeEEEeccc
Q psy14856 435 -SFDYMN-IINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK---T-IYTLNSMDYDMAFCTNLRNKGIHLKIDSTQ 505 (734)
Q Consensus 435 -sedy~~-i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~---~-~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~ 505 (734)
++.... ...+.. .|. .+|.-++++++++++|++ ... . -|+...+.||++++.+++.+|+...+++..
T Consensus 212 f~~~~~~~l~~r~~--LG~-~~~~~Gtg~afRR~aLe~-l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~a 284 (504)
T PRK14716 212 FAESHLKDLPVREA--LGG-LIPSAGVGTAFSRRALER-LAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVR 284 (504)
T ss_pred HHHHHHHHHHHHHh--cCC-ccccCCeeEEeEHHHHHH-HHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccc
Confidence 111111 122233 443 366778899999999996 211 1 377788999999999999999998887654
No 28
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.50 E-value=9.7e-13 Score=133.55 Aligned_cols=201 Identities=12% Similarity=0.140 Sum_probs=130.8
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEE-ec-CCCCcHHHHHHHHHHhccCcceEEEEe----CCCCCcHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFV-YN-NQEYHAPLFDDYIHNFKTMFKNVKYIA----HNSTVNSKEARN 368 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I-~n-s~D~t~~il~~f~~~~~~~y~~V~ii~----~~~~~g~a~arN 368 (734)
|+||+||++++|+++|+||.+|+||. .++|+| ++ |+|.|.+++++|.++... ..++++. ...+.|.+.|||
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWRKKLED--SGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHHHhCcc--cCeEEEEecccCCCCccHHHHHH
Confidence 68999999999999999999999984 355444 44 999999999999876543 3556553 234578999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecc-cCCCcccccccccccCCccccchHHHHHHHh
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL-VRPFKAWSNFWGALNADGFYARSFDYMNIIN 443 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l-~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~ 443 (734)
.|++.| ++||++|+|+|.++. |+.|..++.. ...++++-. ..+......+.... .............
T Consensus 78 ~g~~~a---~gd~i~~lD~D~~~~-~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 149 (219)
T cd06913 78 QAIAQS---SGRYLCFLDSDDVMM-PQRIRLQYEAALQHPNSIIGCQVRRIPEDSTERYTRWI----NTLTREQLLTQVY 149 (219)
T ss_pred HHHHhc---CCCEEEEECCCccCC-hhHHHHHHHHHHhCCCcEEEEEEEecCcccchhhHHHH----HhcCHHHHHHHHH
Confidence 999875 699999999999997 9999887752 223444322 11110000000000 0001111111111
Q ss_pred cccCCcceeeeceeeeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 444 GDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 444 ~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
. . .|. .......+++|+++++ .+ .|... ...||..|+.++.++|..++..++..+-|-..+..
T Consensus 150 ~-~--~~~---~~~~~~~~~rr~~~~~-~g--~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~~~s 214 (219)
T cd06913 150 T-S--HGP---TVIMPTWFCSREWFSH-VG--PFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLLYRYHPGA 214 (219)
T ss_pred h-h--cCC---ccccccceeehhHHhh-cC--CccchhccchhHHHHHHHHHHcCCceEEEcceeeeeeecCCC
Confidence 0 0 111 0112235789999997 32 24432 35699999999999999999999888887765543
No 29
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.49 E-value=5.3e-13 Score=134.87 Aligned_cols=195 Identities=12% Similarity=0.137 Sum_probs=132.9
Q ss_pred EEEEecCChhHHHHHHHHHHcccC-CCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNY-PAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdY-Pk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
|+||+||++..|+.+|++|.++.| +..+| ++|+| |+|.|.++++++.++. +.++++..+.+.|.+.|+|.|++
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~ei-iiVDd~S~d~t~~~~~~~~~~~----~~i~~~~~~~n~G~~~a~n~g~~ 75 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEI-IVVDDNSPDGTAEIVRELAKEY----PRVRLIVRPGKRGLGSAYIEGFK 75 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEE-EEEeCCCCCChHHHHHHHHHhC----CceEEEecCCCCChHHHHHHHHH
Confidence 589999999999999999999999 55444 33444 8999999999887654 46788888899999999999998
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeee-cccCCCcccccccccccCCccccchH----HHHHHHh
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAP-LLVRPFKAWSNFWGALNADGFYARSF----DYMNIIN 443 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP-~l~~~~~~wsNFWgal~~~GyY~Rse----dy~~i~~ 443 (734)
.| .+||++++|+|..+. |+.|+.|++. +..+++. .....+.. .+ | +.+.+.. .+.....
T Consensus 76 ~a---~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~-~~-~------~~~~~~~~~~~~~~~~~~ 143 (224)
T cd06442 76 AA---RGDVIVVMDADLSHP-PEYIPELLEAQLEGGADLVIGSRYVEGGGV-EG-W------GLKRKLISRGANLLARLL 143 (224)
T ss_pred Hc---CCCEEEEEECCCCCC-HHHHHHHHHHHhcCCCCEEEEeeeecCCcc-CC-C------cHHHHHHHHHHHHHHHHH
Confidence 86 579999999999997 9999999874 3344433 22111110 11 1 1111111 1111110
Q ss_pred cccCCcceeeeceee-eEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccC
Q psy14856 444 GDQGGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSE 514 (734)
Q Consensus 444 ~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~ 514 (734)
. . . +++... ++.+++++++++ .+ ..+....++.|+.||.++.++|..+...+.....|....+
T Consensus 144 ~-~--~---~~~~~~~~~~~~~r~~~~~-ig-~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~s 207 (224)
T cd06442 144 L-G--R---KVSDPTSGFRAYRREVLEK-LI-DSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGES 207 (224)
T ss_pred c-C--C---CCCCCCCccchhhHHHHHH-Hh-hhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCcC
Confidence 0 1 1 222333 456899999998 32 2344456677889999999999998887755444444443
No 30
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.49 E-value=6.3e-13 Score=158.99 Aligned_cols=203 Identities=15% Similarity=0.255 Sum_probs=135.6
Q ss_pred CCCCcEEEEEEecCChh-HHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCC-CcH
Q psy14856 288 DQFPSVLISVFIDKPTA-FLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNST-VNS 363 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~-~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~-~g~ 363 (734)
+..|+|+|.||+|||+. .+++++.++.++|||+++++++|.+ |+|.+.+ ++++. .++++..++| .++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~----la~~~-----~v~yI~R~~n~~gK 327 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ----FAQEV-----GVKYIARPTHEHAK 327 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH----HHHHC-----CcEEEEeCCCCcch
Confidence 45799999999999984 6789999999999999988877665 5666554 44443 4677765554 468
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceee---ecc-cCCCcccccccc--cccCCccccc
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIA---PLL-VRPFKAWSNFWG--ALNADGFYAR 434 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVa---P~l-~~~~~~wsNFWg--al~~~GyY~R 434 (734)
+.+.|.|++.+ ++||++++|||.+++ |+.|+.++. ++.++.. |.. ..++..-.|+-. ....++
T Consensus 328 AGnLN~aL~~a---~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~---- 399 (852)
T PRK11498 328 AGNINNALKYA---KGEFVAIFDCDHVPT-RSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEG---- 399 (852)
T ss_pred HHHHHHHHHhC---CCCEEEEECCCCCCC-hHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccch----
Confidence 88999999885 699999999999997 999999884 3444322 111 011100011100 001111
Q ss_pred hHHHHHHHhcccCCcceeee-ceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEecc-cceEEeec
Q psy14856 435 SFDYMNIINGDQGGKGIWNV-PYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDST-QEYGHLVD 512 (734)
Q Consensus 435 sedy~~i~~~~~~~~G~~nV-P~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~-~~~G~l~~ 512 (734)
+-+...++... ..|+. .+.+++.+++|+++++ .+ -|......||+++|.+++++|+...+.|+ ..+|. .
T Consensus 400 -~~fy~~iq~g~---~~~~a~~~~Gs~aviRReaLee-VG--Gfd~~titED~dlslRL~~~Gyrv~yl~~~~a~gl--a 470 (852)
T PRK11498 400 -TLFYGLVQDGN---DMWDATFFCGSCAVIRRKPLDE-IG--GIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGL--A 470 (852)
T ss_pred -hHHHHHHHhHH---HhhcccccccceeeeEHHHHHH-hc--CCCCCccCccHHHHHHHHHcCCEEEEEeccceeEE--C
Confidence 11222222221 22333 3456788999999998 43 36666688999999999999998877654 45553 5
Q ss_pred cCCC
Q psy14856 513 SENF 516 (734)
Q Consensus 513 ~~~~ 516 (734)
|+++
T Consensus 471 Pesl 474 (852)
T PRK11498 471 TESL 474 (852)
T ss_pred CCCH
Confidence 6654
No 31
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.48 E-value=8.7e-13 Score=133.05 Aligned_cols=174 Identities=14% Similarity=0.164 Sum_probs=122.6
Q ss_pred EEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHH
Q psy14856 293 VLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAV 371 (734)
Q Consensus 293 V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al 371 (734)
|+|+||++|+++.|+++|++|.+|.|++.+|. +|++ |+|.+.+++++ ..+.++. .+.|.+.|+|.|+
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evi-vvdd~s~d~~~~~~~~---------~~~~~~~--~~~g~~~a~n~g~ 68 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEII-VVDGGSTDGTVAIARS---------AGVVVIS--SPKGRARQMNAGA 68 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEE-EEeCCCCccHHHHHhc---------CCeEEEe--CCcCHHHHHHHHH
Confidence 68999999999999999999999999887763 3444 88999888775 2455554 3567899999999
Q ss_pred HhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCC
Q psy14856 372 ENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGG 448 (734)
Q Consensus 372 ~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~ 448 (734)
+.| .+||++++|+|+.++ |+.|+.|+.. ...++++...... ..+.+ .+. .......+
T Consensus 69 ~~a---~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~---------~~~---~~~~~~~~-- 128 (221)
T cd02522 69 AAA---RGDWLLFLHADTRLP-PDWDAAIIETLRADGAVAGAFRLRFD--DPGPR---------LRL---LELGANLR-- 128 (221)
T ss_pred Hhc---cCCEEEEEcCCCCCC-hhHHHHHHHHhhcCCcEEEEEEeeec--CCccc---------hhh---hhhcccce--
Confidence 886 489999999999997 9999998753 2233333221100 00111 110 11111111
Q ss_pred cceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEE
Q psy14856 449 KGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKI 501 (734)
Q Consensus 449 ~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv 501 (734)
......|+.+++.+++++++.. .+ .|......||+.||.+++++|..+++
T Consensus 129 ~~~~~~~~~~~~~~~r~~~~~~-~G--~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 129 SRLFGLPYGDQGLFIRRELFEE-LG--GFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ecccCCCcCCceEEEEHHHHHH-hC--CCCccccccHHHHHHHHHhCCCEEEc
Confidence 2223446666789999999987 43 36555578999999999999999987
No 32
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.47 E-value=1.6e-12 Score=129.82 Aligned_cols=194 Identities=11% Similarity=0.104 Sum_probs=128.7
Q ss_pred EEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 294 LISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 294 ~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
+|+||+||++.+|+++|+||.+|+||+.+|.| |++ |+|.|.++++++..+++ ..+.++..+.+.|.+.++|.|+.
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiV-vddgS~d~t~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELII-SDDGSTDGTVEIIKEYIDKDP---FIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCCCcHHHHHHHHhcCC---ceEEEEeCCCCccHHHHHHHHHH
Confidence 58999999999999999999999999766533 444 89999999999887654 35777888889999999999987
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHHc--CC---ceeee-cc--cCCC-cccccccccccCCccccchHHHHHHHh
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NE---SLIAP-LL--VRPF-KAWSNFWGALNADGFYARSFDYMNIIN 443 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk---~IVaP-~l--~~~~-~~wsNFWgal~~~GyY~Rsedy~~i~~ 443 (734)
.| ++||++++|+|.++. |+.|+.|++. .. .++.. .. ...+ .....++.. ..+.....+.....
T Consensus 77 ~~---~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 148 (214)
T cd04196 77 AA---DGDYVFFCDQDDIWL-PDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEY----QKIKPGTSFNNLLF 148 (214)
T ss_pred hC---CCCEEEEECCCcccC-hhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccc----cccCCccCHHHHHH
Confidence 64 799999999999998 9999999984 21 12221 11 0000 000000000 00000011111111
Q ss_pred cccCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEecccceEEeec
Q psy14856 444 GDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVD 512 (734)
Q Consensus 444 ~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~ 512 (734)
. -+..+++.+++++++++ .+ .|... .+.+|+.|+..++..| .+++.+...+-|...
T Consensus 149 ~---------~~~~~~~~~~r~~~~~~-~~--~~~~~~~~~~D~~~~~~~~~~~-~~~~~~~~~~~~r~~ 205 (214)
T cd04196 149 Q---------NVVTGCTMAFNRELLEL-AL--PFPDADVIMHDWWLALLASAFG-KVVFLDEPLILYRQH 205 (214)
T ss_pred h---------CccCCceeeEEHHHHHh-hc--cccccccccchHHHHHHHHHcC-ceEEcchhHHHHhcc
Confidence 1 12234677899999988 32 23333 5788999999888855 676677665544433
No 33
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.46 E-value=1.2e-12 Score=156.10 Aligned_cols=204 Identities=16% Similarity=0.292 Sum_probs=136.4
Q ss_pred CCCCcEEEEEEecCChh-HHHHHHHHHHcccCCCceEEEEEec--CCCCc--------------HHHHHHHHHHhccCcc
Q psy14856 288 DQFPSVLISVFIDKPTA-FLEEFLNKIANLNYPAKKISMFVYN--NQEYH--------------APLFDDYIHNFKTMFK 350 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~-~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t--------------~~il~~f~~~~~~~y~ 350 (734)
+..|+|+|+||+|||++ .++.++.++.++|||+++++++|.+ |+|+| .+.++++.++.
T Consensus 128 ~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~----- 202 (713)
T TIGR03030 128 EEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL----- 202 (713)
T ss_pred ccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc-----
Confidence 46799999999999986 5578999999999998888866654 88887 24455555443
Q ss_pred eEEEEeCCCCC-cHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceee---ecc-cCCCcccccc
Q psy14856 351 NVKYIAHNSTV-NSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIA---PLL-VRPFKAWSNF 422 (734)
Q Consensus 351 ~V~ii~~~~~~-g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVa---P~l-~~~~~~wsNF 422 (734)
.++++..++|. +++.+.|.|++.+ ++||+.++|||.+++ |++|+.++. .+..+.. |.. ..++..-.|.
T Consensus 203 ~v~yi~r~~n~~~KAgnLN~al~~a---~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 203 GVNYITRPRNVHAKAGNINNALKHT---DGELILIFDADHVPT-RDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred CcEEEECCCCCCCChHHHHHHHHhc---CCCEEEEECCCCCcC-hhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhh
Confidence 57777766664 5788889999774 689999999999997 999999985 3444322 211 1111000010
Q ss_pred cccccCCccccc----hHHHHHHHhcccCCcceeeec-eeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCe
Q psy14856 423 WGALNADGFYAR----SFDYMNIINGDQGGKGIWNVP-YITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGI 497 (734)
Q Consensus 423 Wgal~~~GyY~R----sedy~~i~~~~~~~~G~~nVP-~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi 497 (734)
+.+.+ .+.+...++.. ...|+.+ +.+++.+++|+++++ .+ .|......||+++|.+++++|+
T Consensus 279 -------~~~~~~~~e~~~f~~~i~~g---~~~~~~~~~~Gs~~~iRR~al~~-iG--Gf~~~~vtED~~l~~rL~~~G~ 345 (713)
T TIGR03030 279 -------GTFRRMPNENELFYGLIQDG---NDFWNAAFFCGSAAVLRREALDE-IG--GIAGETVTEDAETALKLHRRGW 345 (713)
T ss_pred -------HHHHHhhhHHHHHHHHHHHH---HhhhCCeeecCceeEEEHHHHHH-cC--CCCCCCcCcHHHHHHHHHHcCC
Confidence 01111 11222222221 2334443 346788999999998 43 3666678999999999999999
Q ss_pred eEEEec-ccceEEeeccCC
Q psy14856 498 HLKIDS-TQEYGHLVDSEN 515 (734)
Q Consensus 498 ~myv~N-~~~~G~l~~~~~ 515 (734)
.....+ ...+| ..|++
T Consensus 346 ~~~y~~~~~~~g--~~p~s 362 (713)
T TIGR03030 346 NSAYLDRPLIAG--LAPET 362 (713)
T ss_pred eEEEeccccccc--cCCCC
Confidence 955555 44444 35555
No 34
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.46 E-value=1.7e-12 Score=132.50 Aligned_cols=198 Identities=19% Similarity=0.296 Sum_probs=130.4
Q ss_pred EEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHh
Q psy14856 295 ISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVEN 373 (734)
Q Consensus 295 I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~ 373 (734)
++||.+|++ ..|.++|+||.++ ..+| |+|+|++|.+.....++ ....++++..++|.|.+.|+|.|++.
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~~~i-ivvDn~s~~~~~~~~~~------~~~~i~~i~~~~n~G~~~a~N~g~~~ 70 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---VDKV-VVVDNSSGNDIELRLRL------NSEKIELIHLGENLGIAKALNIGIKA 70 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---CCEE-EEEeCCCCccHHHHhhc------cCCcEEEEECCCceehHHhhhHHHHH
Confidence 478999999 9999999999998 3344 44666544444444332 23578899989999999999999999
Q ss_pred hhhcCccEEEEECCCccCCChHHHHHHH---H---cC--CceeeecccCCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 374 SLHKGVDFYFYVDSDSHLDNPDVLKYLV---N---RN--ESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 374 a~~~~~DYlf~vDAD~~L~np~tL~~LI---~---~n--k~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
|+..++||++++|+|+.++ |+.|+.|+ . .+ -.+++|.+..... ..++.......+..+ .....
T Consensus 71 a~~~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~ 141 (237)
T cd02526 71 ALENGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNSNIGAVGPRIIDRRT--GENSPGVRKSGYKLR------IQKEG 141 (237)
T ss_pred HHhCCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCCCeEEEeeeEEcCCC--CeeccceeccCccce------ecccc
Confidence 8766789999999999997 99999994 2 12 2345554421110 011111000011100 00000
Q ss_pred cCCcceeeecee-eeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEEeeccCCC
Q psy14856 446 QGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENF 516 (734)
Q Consensus 446 ~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~~ 516 (734)
. .+.-.++.+ +++.+++++++++ .+. |+.. ...+|+.||.+++++|+.+.+++...+-|-.+..++
T Consensus 142 ~--~~~~~~~~~~~~~~~~rr~~~~~-~gg--fd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~~~ 210 (237)
T cd02526 142 E--EGLKEVDFLITSGSLISLEALEK-VGG--FDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDKRV 210 (237)
T ss_pred c--CCceEeeeeeccceEEcHHHHHH-hCC--CCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCcch
Confidence 1 222233333 4567899999998 432 3321 136899999999999999999999988887766553
No 35
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.46 E-value=2.3e-12 Score=130.11 Aligned_cols=186 Identities=12% Similarity=0.086 Sum_probs=121.4
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCC--CCCcHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHN--STVNSKEARNLA 370 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~--~~~g~a~arN~a 370 (734)
|+||++|++..|+++|++|.+|+||.+.++|+|. + |+|.|.++++ +.... ....++++..+ .+.|.+.++|.|
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~--~~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAK--PNFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhC--CCcceEEeeccCcccchhHHHHHHH
Confidence 6899999999999999999999999966665444 3 8899999888 54333 34577777766 467888999999
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceee-ecccCCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIA-PLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVa-P~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
++.| .+||++++|+|+++. |+.|+.|++. +...+. +..... ..+++... ...+.........
T Consensus 78 ~~~~---~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~~~~v~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~ 144 (229)
T cd04192 78 IKAA---KGDWIVTTDADCVVP-SNWLLTFVAFIQKEQIGLVAGPVIYFK---GKSLLAKF------QRLDWLSLLGLIA 144 (229)
T ss_pred HHHh---cCCEEEEECCCcccC-HHHHHHHHHHhhcCCCcEEeeeeeecC---CccHHHHH------HHHHHHHHHHHHh
Confidence 9875 689999999999997 9999999972 222222 222111 11121111 0001000000000
Q ss_pred cCCcceeeece--eeeEEeeehhhHhhccccccccc--CCCchhHHHHHHHHHcCe-eEEE
Q psy14856 446 QGGKGIWNVPY--ITNCYLMKTSVIKATNIKTIYTL--NSMDYDMAFCTNLRNKGI-HLKI 501 (734)
Q Consensus 446 ~~~~G~~nVP~--v~~~~LI~~~vL~~~~~~~~f~~--~~~deDm~Fc~~ar~~Gi-~myv 501 (734)
. ...+..|+ .+++.+++++++++ .+ .|.. ....+|..|+.++.++|. .++.
T Consensus 145 ~--~~~~~~~~~~~g~~~~~rr~~~~~-~g--gf~~~~~~~~eD~~~~~~~~~~g~~~~~~ 200 (229)
T cd04192 145 G--SFGLGKPFMCNGANMAYRKEAFFE-VG--GFEGNDHIASGDDELLLAKVASKYPKVAY 200 (229)
T ss_pred h--HHHhcCccccccceEEEEHHHHHH-hc--CCccccccccCCHHHHHHHHHhCCCCEEE
Confidence 0 00011122 35678999999998 33 2432 235689999999999999 6544
No 36
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.45 E-value=1.9e-12 Score=132.31 Aligned_cols=199 Identities=15% Similarity=0.134 Sum_probs=131.6
Q ss_pred cEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 292 SVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
+|+|+||++|+++.|.++|+++.+++||....+++|. | |+|.+.++++++.++ ++.++++..+ +.+.+.|+|.
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~----~~~v~~i~~~-~~~~~~a~N~ 75 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAK----DPRIRLIDNP-KRIQSAGLNI 75 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhc----CCeEEEEeCC-CCCchHHHHH
Confidence 4899999999999999999999999998555554444 4 889999998887654 4578888755 5578899999
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecc-cCCCcccccccccc--cCCccccchHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL-VRPFKAWSNFWGAL--NADGFYARSFDYMNII 442 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l-~~~~~~wsNFWgal--~~~GyY~Rsedy~~i~ 442 (734)
|++.| ++||++++|+|..++ |++|+.+++. +..++.+.. ..... .+|... .....+..........
T Consensus 76 g~~~a---~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 148 (249)
T cd02525 76 GIRNS---RGDIIIRVDAHAVYP-KDYILELVEALKRTGADNVGGPMETIGES---KFQKAIAVAQSSPLGSGGSAYRGG 148 (249)
T ss_pred HHHHh---CCCEEEEECCCccCC-HHHHHHHHHHHhcCCCCEEecceecCCCC---hHHHHHHHHhhchhccCCcccccc
Confidence 99886 699999999999997 9999999953 223333322 11111 111000 0000000000000000
Q ss_pred hcccCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEecccceEEee
Q psy14856 443 NGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLV 511 (734)
Q Consensus 443 ~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~ 511 (734)
. . ...+ . ...++.+++++++++ .+ .|... ...||..||.+++++|..+.+.+.....|..
T Consensus 149 ~--~--~~~~-~-~~~~~~~~~~~~~~~-~g--~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~ 209 (249)
T cd02525 149 A--V--KIGY-V-DTVHHGAYRREVFEK-VG--GFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYP 209 (249)
T ss_pred c--c--cccc-c-cccccceEEHHHHHH-hC--CCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcC
Confidence 0 0 0011 1 123456789999987 32 23322 3579999999999999999998877776654
No 37
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.45 E-value=2.6e-12 Score=122.51 Aligned_cols=159 Identities=13% Similarity=0.213 Sum_probs=122.1
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENS 374 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a 374 (734)
|+||++|+.+.|++++++|.++.||..++.+..++|+|.+.+.++++. ..++++..+++.|.+.|+|.|++.|
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~a~n~~~~~~ 73 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELF-------PEVRLIRNGENLGFGAGNNQGIREA 73 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhC-------CCeEEEecCCCcChHHHhhHHHhhC
Confidence 589999999999999999999999887764433348888877776542 2688888888999999999999986
Q ss_pred hhcCccEEEEECCCccCCChHHHHHHHHc---CCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcce
Q psy14856 375 LHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGI 451 (734)
Q Consensus 375 ~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~ 451 (734)
++||++++|+|+++. |+.+..+++. +..+.+ +.. +
T Consensus 74 ---~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~~~~-~~~--------------------~----------------- 111 (166)
T cd04186 74 ---KGDYVLLLNPDTVVE-PGALLELLDAAEQDPDVGI-VGP--------------------K----------------- 111 (166)
T ss_pred ---CCCEEEEECCCcEEC-ccHHHHHHHHHHhCCCceE-EEc--------------------c-----------------
Confidence 799999999999997 9999998863 111110 110 0
Q ss_pred eeeceeeeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEE
Q psy14856 452 WNVPYITNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGH 509 (734)
Q Consensus 452 ~nVP~v~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~ 509 (734)
..+++.+++++++++ .+ .|... ...+|+.|+.++.++|+.+..++....-|
T Consensus 112 ----~~~~~~~~~~~~~~~-~~--~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h 164 (166)
T cd04186 112 ----VSGAFLLVRREVFEE-VG--GFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYH 164 (166)
T ss_pred ----CceeeEeeeHHHHHH-cC--CCChhhhccccHHHHHHHHHHcCCeEEEccceEEEe
Confidence 234678999999987 32 23321 26799999999999999999988765544
No 38
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.44 E-value=1.9e-12 Score=127.23 Aligned_cols=188 Identities=13% Similarity=0.123 Sum_probs=126.7
Q ss_pred EEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 294 LISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 294 ~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
+|+||+||++.+|+++|++|.+|.||..+| +++++ |+|.+.++++++..+ +..+...++.|.+.|+|.|++
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~ev-ivvDd~s~d~~~~~~~~~~~~-------~~~~~~~~~~g~~~a~n~~~~ 72 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEY-IVIDGGSTDGTVDIIKKYEDK-------ITYWISEPDKGIYDAMNKGIA 72 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceE-EEEeCCCCccHHHHHHHhHhh-------cEEEEecCCcCHHHHHHHHHH
Confidence 589999999999999999999999998555 33444 899999999987653 233445678899999999998
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHH-----cCCceeeeccc--CCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVN-----RNESLIAPLLV--RPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~-----~nk~IVaP~l~--~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
.| ++||++++|+|.++. |+.+..++. .+..++++-.. .........+ ...........
T Consensus 73 ~a---~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~--- 137 (202)
T cd06433 73 LA---TGDIIGFLNSDDTLL-PGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRR--------RPPPFLDKFLL--- 137 (202)
T ss_pred Hc---CCCEEEEeCCCcccC-chHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCC--------CCcchhhhHHh---
Confidence 86 589999999999998 888888872 13344443221 1110000000 00001110111
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEecccceEEeecc
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDS 513 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~ 513 (734)
...++.+++.+++++++++ .+ .|... ...+|+.||.++.++|...+..+...+-|....
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~-~~--~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~~ 197 (202)
T cd06433 138 ------YGMPICHQATFFRRSLFEK-YG--GFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAFRLGG 197 (202)
T ss_pred ------hcCcccCcceEEEHHHHHH-hC--CCchhhCchhhHHHHHHHHHcCCceEecchhhhhheecC
Confidence 1123334567899999998 32 24422 457899999999999999987776655444433
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.42 E-value=6.1e-13 Score=131.56 Aligned_cols=174 Identities=15% Similarity=0.168 Sum_probs=114.3
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
|+||+||++..|+++|++|.+++||..+++++|. + |+|.|.++++++. ..+.+.....+.|++.|+|.|++
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~-------~~~~~~~~~~~~gk~~aln~g~~ 73 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAAG-------ATVLERHDPERRGKGYALDFGFR 73 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHcC-------CeEEEeCCCCCCCHHHHHHHHHH
Confidence 6899999999999999999999998766665444 3 8999998876532 12444445667899999999999
Q ss_pred hhh--hcCccEEEEECCCccCCChHHHHHHHHc---CCceeeecc-cC-CCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 373 NSL--HKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLL-VR-PFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 373 ~a~--~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l-~~-~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
.++ ..++||++++|||+.+. |+.|+.|++. +..++..-. .. ++ .+++..+.. -.|........... .
T Consensus 74 ~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~~~~v~g~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~-~ 147 (183)
T cd06438 74 HLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAGARVVQAYYNSKNPD---DSWITRLYA-FAFLVFNRLRPLGR-S 147 (183)
T ss_pred HHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhCCCeeEEEEeeeCCc---cCHHHHHHH-HHHHHHHHHHHHHH-H
Confidence 886 46799999999999998 9999999963 344443222 11 11 133221110 00111111111111 1
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHH
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAF 488 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~F 488 (734)
+ .|. .++..+++++++++++++ + -|....+.||+.|
T Consensus 148 ~--~~~-~~~~~G~~~~~rr~~l~~-~---g~~~~~l~ED~~~ 183 (183)
T cd06438 148 N--LGL-SCQLGGTGMCFPWAVLRQ-A---PWAAHSLTEDLEF 183 (183)
T ss_pred H--cCC-CeeecCchhhhHHHHHHh-C---CCCCCCcccccCC
Confidence 1 121 234567778899999998 3 3666777888764
No 40
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.39 E-value=9e-12 Score=131.84 Aligned_cols=193 Identities=17% Similarity=0.151 Sum_probs=127.2
Q ss_pred ecCC-hhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhh
Q psy14856 299 IDKP-TAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLH 376 (734)
Q Consensus 299 i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~ 376 (734)
.||| ...|++++++|.++.+ +| ++|+| |+|. +.++++.+ .++.|+++..++|.|.+.|+|.|++.|.+
T Consensus 2 tyn~~~~~l~~~l~sl~~q~~---~i-iVVDN~S~~~--~~~~~~~~----~~~~i~~i~~~~N~G~a~a~N~Gi~~a~~ 71 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQVD---RI-IAVDNSPHSD--QPLKNARL----RGQKIALIHLGDNQGIAGAQNQGLDASFR 71 (281)
T ss_pred ccCccHHHHHHHHHHHHhcCC---EE-EEEECcCCCc--HhHHHHhc----cCCCeEEEECCCCcchHHHHHHHHHHHHH
Confidence 5898 5899999999999863 34 44555 4333 33333332 34689999999999999999999999988
Q ss_pred cCccEEEEECCCccCCChHHHHHHHHc------CCceeeecc-cCCCcccccccccccCCccccchHHHHHHHhcccCCc
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLVNR------NESLIAPLL-VRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGK 449 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI~~------nk~IVaP~l-~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~ 449 (734)
.++||++++|+|++++ |+.|+.|++. +..+++|.+ ...+.....++ ...++..+ .... . .. .
T Consensus 72 ~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~---~-~~--~ 140 (281)
T TIGR01556 72 RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAI---HLDGLLLR-QISL---D-GL--T 140 (281)
T ss_pred CCCCEEEEECCCCCCC-HHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCce---eeccccee-eecc---c-cc--C
Confidence 8899999999999998 9999999863 234666654 22111011110 00111000 0000 0 01 1
Q ss_pred ceeeece-eeeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEEeeccCC
Q psy14856 450 GIWNVPY-ITNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 450 G~~nVP~-v~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
+...+.+ +++..+|+++++++ .+. |+.. -..+|..||.+++++|+.+++++...+-|.+....
T Consensus 141 ~~~~~~~~~~sg~li~~~~~~~-iG~--fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~~ 206 (281)
T TIGR01556 141 TPQKTSFLISSGCLITREVYQR-LGM--MDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDSK 206 (281)
T ss_pred CceeccEEEcCcceeeHHHHHH-hCC--ccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCcc
Confidence 2223332 34456899999997 432 3321 13589999999999999999999988888876543
No 41
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.39 E-value=1.9e-11 Score=130.46 Aligned_cols=202 Identities=10% Similarity=0.093 Sum_probs=129.4
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
..|.|+|+||+||++.+|+++|+|+++|+||..+|. +|++ |+ +.+++++++++.+ .+.|+++..+.+.|.+.|+
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiI-VVDDgS~--~~~~~~~~~~~~~--~~ri~~i~~~~n~G~~~a~ 77 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMI-IVDDCST--SWEQLQQYVTALN--DPRITYIHNDINSGACAVR 77 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEE-EEECCCC--CHHHHHHHHHHcC--CCCEEEEECCCCCCHHHHH
Confidence 469999999999999999999999999999986653 3444 55 4678888887654 3579999999999999999
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCc-eeeecccCCCccccc--ccccccCCccccch-HHHHHHHh
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNES-LIAPLLVRPFKAWSN--FWGALNADGFYARS-FDYMNIIN 443 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~-IVaP~l~~~~~~wsN--FWgal~~~GyY~Rs-edy~~i~~ 443 (734)
|.|++.| ++||+.++|+|..+. |+.|..+++.-.. ..+.++.... .... ..+.......+-.. ..+-....
T Consensus 78 N~gi~~a---~g~~I~~lDaDD~~~-p~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 152 (279)
T PRK10018 78 NQAIMLA---QGEYITGIDDDDEWT-PNRLSVFLAHKQQLVTHAFLYAND-YVCQGEVYSQPASLPLYPKSPYSRRLFYK 152 (279)
T ss_pred HHHHHHc---CCCEEEEECCCCCCC-ccHHHHHHHHHHhCCCccEEEccc-eeecCcccccccccCCCCCCCCCHHHHHH
Confidence 9999886 699999999999998 9999999874221 1111111100 0000 00000000000000 01111122
Q ss_pred cccCCcceeeeceeeeEEeeehhhHhhcccccccc-cCCCchhHHHHHHHHHcCeeEEEecccceEEeeccC
Q psy14856 444 GDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYT-LNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSE 514 (734)
Q Consensus 444 ~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~-~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~ 514 (734)
+.. .| +..++.+..+.. ..|+ .....+|.+|+.++-.+|-..+..+...+=|-+.+.
T Consensus 153 ~n~--ig--------~~~~~~~~~~~~----~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~ 210 (279)
T PRK10018 153 RNI--IG--------NQVFTWAWRFKE----CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHG 210 (279)
T ss_pred hcC--cC--------ceeeehhhhhhh----cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCC
Confidence 222 22 333444444544 2353 334679999999998888777766665444444444
No 42
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.38 E-value=5.5e-12 Score=128.59 Aligned_cols=194 Identities=13% Similarity=0.155 Sum_probs=123.9
Q ss_pred cEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 292 SVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 292 ~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
.|+|+||+||++ +.|.++|+++.+|+ +.+|.+..++|+|.+.+++++.. .++.+.++. .++.|++.|+|.|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~~eiivvdd~s~d~~~~~l~~~~-----~~~~~~v~~-~~~~g~~~a~n~g 72 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--PLEIIVVTDGDDEPYLSILSQTV-----KYGGIFVIT-VPHPGKRRALAEG 72 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--CCEEEEEeCCCChHHHHHHHhhc-----cCCcEEEEe-cCCCChHHHHHHH
Confidence 489999999999 99999999999999 44553333348888888774322 234566665 5678999999999
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CC--ceeeeccc-CCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NE--SLIAPLLV-RPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk--~IVaP~l~-~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
++.| ++||++++|+|++++ |+.|+.|++. +. .++++... .... +++|..+. ..++.+.. ........
T Consensus 73 ~~~a---~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~v~~v~~~~~~~~~~--~~~~~~~~-~~~~~~~~-~~~~~~~~ 144 (235)
T cd06434 73 IRHV---TTDIVVLLDSDTVWP-PNALPEMLKPFEDPKVGGVGTNQRILRPR--DSKWSFLA-AEYLERRN-EEIRAAMS 144 (235)
T ss_pred HHHh---CCCEEEEECCCceeC-hhHHHHHHHhccCCCEeEEcCceEeecCc--ccHHHHHH-HHHHHHHH-HHHHHHHh
Confidence 9875 799999999999998 9999999963 23 23333221 1110 12332111 11121111 11001111
Q ss_pred cCCcceeeeceee-eEEeeehhhHhhcccc-ccc-------ccCCCchhHHHHHHHHHcCeeEEEecccc
Q psy14856 446 QGGKGIWNVPYIT-NCYLMKTSVIKATNIK-TIY-------TLNSMDYDMAFCTNLRNKGIHLKIDSTQE 506 (734)
Q Consensus 446 ~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~-~~f-------~~~~~deDm~Fc~~ar~~Gi~myv~N~~~ 506 (734)
. .| .++.++ ++.+++++++++ .+- ..| ......||+.||.+++++|+.+.+++...
T Consensus 145 ~--~~--~~~~~~G~~~~~rr~~l~~-~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~ 209 (235)
T cd06434 145 Y--DG--GVPCLSGRTAAYRTEILKD-FLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSE 209 (235)
T ss_pred h--CC--CEEEccCcHHHHHHHHHhh-hhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCe
Confidence 1 22 123333 355789999987 321 222 12347899999999999999998876443
No 43
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.37 E-value=3.2e-11 Score=117.93 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=84.0
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENS 374 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a 374 (734)
|+||++|+...|+++|++|.+++|+..+|.++.++|+|.|.++++++.+..+ +..+.++..+.+.+.+.++|.|++.|
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~n~g~~~a 78 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFP--IPIKHVWQEDEGFRKAKIRNKAIAAA 78 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEEEeCCCchhHHHHHHHHHhhcC--CceEEEEcCCcchhHHHHHHHHHHHh
Confidence 5799999999999999999999999988754433489999999988765422 23344555555667889999999886
Q ss_pred hhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 375 LHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 375 ~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
.+||++++|+|+++. |+.|+.+++.
T Consensus 79 ---~g~~i~~lD~D~~~~-~~~l~~~~~~ 103 (182)
T cd06420 79 ---KGDYLIFIDGDCIPH-PDFIADHIEL 103 (182)
T ss_pred ---cCCEEEEEcCCcccC-HHHHHHHHHH
Confidence 699999999999997 9999999875
No 44
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.36 E-value=1.1e-11 Score=125.23 Aligned_cols=189 Identities=11% Similarity=0.087 Sum_probs=124.2
Q ss_pred EEEEecCChhHHHHHHHHHHcccC----CCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNY----PAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdY----Pk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
|+||+||++..|+++|++|.++.+ ++.+|.+ +++ |+|.|.++++++.++.+. .++++..+++.|.+.|+|.
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiiv-vdd~S~D~t~~~~~~~~~~~~~---~i~~i~~~~n~G~~~a~~~ 76 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIV-VDDGSKDGTAEVARKLARKNPA---LIRVLTLPKNRGKGGAVRA 76 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEE-EeCCCCCchHHHHHHHHHhCCC---cEEEEEcccCCCcHHHHHH
Confidence 689999999999999999998865 5655533 444 999999999998876542 2688988889999999999
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--C--Cceeee-cccCCCc--ccccccccccCCccccchHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--N--ESLIAP-LLVRPFK--AWSNFWGALNADGFYARSFDYMNII 442 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--n--k~IVaP-~l~~~~~--~wsNFWgal~~~GyY~Rsedy~~i~ 442 (734)
|++.| .+||++++|+|..++ |+.|..|++. + ..++.. -....+. .... | ...+..+...++...
T Consensus 77 g~~~a---~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~ 147 (211)
T cd04188 77 GMLAA---RGDYILFADADLATP-FEELEKLEEALKTSGYDIAIGSRAHLASAAVVKRS-W----LRNLLGRGFNFLVRL 147 (211)
T ss_pred HHHHh---cCCEEEEEeCCCCCC-HHHHHHHHHHHhccCCcEEEEEeeccCCccccccc-H----HHHHHHHHHHHHHHH
Confidence 99987 579999999999997 9999999984 2 223332 1111110 0000 0 000111111111111
Q ss_pred hcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 443 NGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 443 ~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
. .|.--.....+..+++++++++ ... ......+.+|+.++.+|+++|+.+....
T Consensus 148 ---~--~~~~~~d~~~g~~~~~r~~~~~-~~~-~~~~~~~~~d~el~~r~~~~g~~~~~vp 201 (211)
T cd04188 148 ---L--LGLGIKDTQCGFKLFTRDAARR-LFP-RLHLERWAFDVELLVLARRLGYPIEEVP 201 (211)
T ss_pred ---H--cCCCCcccccCceeEcHHHHHH-HHh-hhhccceEeeHHHHHHHHHcCCeEEEcC
Confidence 0 1111111223456889999987 221 1223456789999999999999877665
No 45
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.35 E-value=1.3e-11 Score=146.57 Aligned_cols=200 Identities=16% Similarity=0.201 Sum_probs=134.5
Q ss_pred CCCCCcEEEEEEecCChhHHHHHHHHHH-cccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe--CCCCCcH
Q psy14856 287 PDQFPSVLISVFIDKPTAFLEEFLNKIA-NLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA--HNSTVNS 363 (734)
Q Consensus 287 ~~~~P~V~I~I~i~n~~~~L~~fL~sL~-~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~--~~~~~g~ 363 (734)
+++.|.|+|.||+|||+..+++.++++. +||||+.+|-+.++.|++.|.+++++..++++ .++++. ...+.+|
T Consensus 59 ~~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p----~~~~v~~~~~g~~gK 134 (727)
T PRK11234 59 KPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPATQADVDAVCARFP----NVHKVVCARPGPTSK 134 (727)
T ss_pred cCCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChhHHHHHHHHHHHCC----CcEEEEeCCCCCCCH
Confidence 3567999999999999999999999986 79999955433333377888999998877654 444333 2236799
Q ss_pred HHHHHHHHHhhhh------cCccEEEEECCCccCCChHHHH---HHHHcCCceeeecccCCCcccccccccccCCccccc
Q psy14856 364 KEARNLAVENSLH------KGVDFYFYVDSDSHLDNPDVLK---YLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYAR 434 (734)
Q Consensus 364 a~arN~al~~a~~------~~~DYlf~vDAD~~L~np~tL~---~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~R 434 (734)
+.|.|.+++.+++ ...|.+++.|||++++ |+.|+ .|+.....|-+|..... ..|+.+-+...
T Consensus 135 a~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~~~~~l~~~~~~VQ~p~~p~~-~~~~~~~~~~~------- 205 (727)
T PRK11234 135 ADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELRLFNYLVERKDLIQIPVYPFE-REWTHFTSGTY------- 205 (727)
T ss_pred HHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHHHHHhhcCCCCeEeecccCCC-ccHHHHHHHHH-------
Confidence 9999999998843 1346688899999998 99999 44333334455544322 22444322111
Q ss_pred hHHHH----HH-HhcccCCcceeeeceeeeEEee-eh--hhHhhccc-ccccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 435 SFDYM----NI-INGDQGGKGIWNVPYITNCYLM-KT--SVIKATNI-KTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 435 sedy~----~i-~~~~~~~~G~~nVP~v~~~~LI-~~--~vL~~~~~-~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
..+|. .+ +-+... .|. +|.-++.+.+ ++ +++.. .+ .-.|..+.+.||++++++++.+|+....++
T Consensus 206 ~~EFa~~~~~~~~~~~~l-gg~--~~l~G~~~af~Rr~l~al~~-~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~ 279 (727)
T PRK11234 206 IDEFAELHGKDVPVREAL-AGQ--VPSAGVGTCFSRRAVTALLE-DGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVR 279 (727)
T ss_pred HHHHHHHhhhhhHHHHHc-CCC--cccCCceEEEecccHHHHHH-hcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcc
Confidence 12332 21 112220 243 4666666777 44 34555 22 135778889999999999999999998888
No 46
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=99.29 E-value=2e-11 Score=131.35 Aligned_cols=157 Identities=15% Similarity=0.217 Sum_probs=101.4
Q ss_pred CCceecC-CCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCC--cccccccC-eeeeccchHHHHHHHHHHhhchhhhhh
Q psy14856 558 CPDVFWF-PIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETG--YEAVPTRD-IHMKQVGLAGVWAEFLRKYVVPLQERE 633 (734)
Q Consensus 558 ~p~Vy~f-pv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~--~~~vpt~d-i~~~~~g~~~~~~~~l~~~v~P~~~~~ 633 (734)
.|.||.+ .+||+++|++||+..+...+-|.... .. .|. ...++|-. .-+.. . +......+.++|+-++.
T Consensus 53 ~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~--~~-~g~~~~s~~RTS~~~~l~~-~-~dpvv~~I~~Ria~~t~-- 125 (310)
T PLN00052 53 QPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVAD--NK-SGKSVMSEVRTSSGMFLDK-R-QDPVVSRIEERIAAWTF-- 125 (310)
T ss_pred CCCEEEECCcCCHHHHHHHHHhcccccccceeec--CC-CCccccCCCEEecceeecC-C-CCHHHHHHHHHHHHHhC--
Confidence 4666655 78999999999999986433121110 00 010 01122221 11111 1 11233445566643321
Q ss_pred hcCCCCCCCCCcceeEEEEcCCCCCCCCccccC------------CceEEEEEecCCCCcCCCccEEEeec---------
Q psy14856 634 FIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDS------------STYTINIALNQVGVDYEGGGCRFIRY--------- 692 (734)
Q Consensus 634 f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~------------S~~T~ni~Ln~~~~dfeGGg~~F~~~--------- 692 (734)
. ... ..+...|+||.++++ +.+|+|- ...|+.++||+ ..+||+|.|+..
T Consensus 126 ---l-p~~-~~E~lQVlrY~~Gq~--Y~~H~D~~~~~~~~~~gg~R~aTvL~YLnd---v~~GGeT~FP~~~~~~~~~~~ 195 (310)
T PLN00052 126 ---L-PEE-NAENIQILRYEHGQK--YEPHFDYFHDKINQALGGHRYATVLMYLST---VDKGGETVFPNAEGWENQPKD 195 (310)
T ss_pred ---C-Ccc-cCcceEEEecCCCCC--CCCCCCccccccccccCCceeEEEEEEecc---CCCCCceecCCcccccccccc
Confidence 1 112 467889999999875 8999992 34899999999 679999999875
Q ss_pred ---------cceeecccceeEEEeCCCc-------ccccCcccCCceeEEEEEeee
Q psy14856 693 ---------NCNVTATRMGWMLMHPGRL-------THYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 693 ---------~~~v~~~~~G~al~h~g~l-------th~H~g~~vT~G~Ryilv~F~ 732 (734)
+.+ ++|++|.||+|.--. .-+|+|.||++|+||++.-|+
T Consensus 196 ~~~s~c~~~gl~-VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi 250 (310)
T PLN00052 196 DTFSECAHKGLA-VKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWI 250 (310)
T ss_pred cchhhhhcCCeE-eccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEee
Confidence 233 459999999997620 027999999999999999997
No 47
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.26 E-value=2e-10 Score=120.90 Aligned_cols=210 Identities=10% Similarity=0.084 Sum_probs=131.4
Q ss_pred EEEEEEecCChhH-HHHHHHHHHc----ccC-CCceEEEEEecCCCCcHHHH-----HHHHHHhccCcceEEEEeCCCCC
Q psy14856 293 VLISVFIDKPTAF-LEEFLNKIAN----LNY-PAKKISMFVYNNQEYHAPLF-----DDYIHNFKTMFKNVKYIAHNSTV 361 (734)
Q Consensus 293 V~I~I~i~n~~~~-L~~fL~sL~~----LdY-Pk~ri~l~I~ns~D~t~~il-----~~f~~~~~~~y~~V~ii~~~~~~ 361 (734)
|+|.||+||+++. |.+.|.+..+ ++| |+.+| +.+++++|....+. +++.++++. ...|+++..+++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI-~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDF-FILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEE-EEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCCC
Confidence 6899999999987 7777777654 787 77565 33444555443332 335555554 5688988888887
Q ss_pred cH-HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceeeecccCC-CcccccccccccCCccccchH
Q psy14856 362 NS-KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIAPLLVRP-FKAWSNFWGALNADGFYARSF 436 (734)
Q Consensus 362 g~-a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVaP~l~~~-~~~wsNFWgal~~~GyY~Rse 436 (734)
|. +.+.|.++.. ..+++||++++|||..+. |+.|++|++ .+..+.+.- +.. ..-..+||..+..-+ ..
T Consensus 79 g~Kag~l~~~~~~-~~~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~vg~vq-~~~~~~n~~~~~~~~~~~~----~~ 151 (254)
T cd04191 79 GRKAGNIADFCRR-WGSRYDYMVVLDADSLMS-GDTIVRLVRRMEANPRAGIIQ-TAPKLIGAETLFARLQQFA----NR 151 (254)
T ss_pred CccHHHHHHHHHH-hCCCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCCEEEEe-CCceeECCCCHHHHHHHHH----HH
Confidence 64 5555555532 225789999999999998 999999997 354443321 110 000123332221101 12
Q ss_pred HHHHHHhcccCCccee---eeceeeeEEeeehhhHhhcccc-------cccccCCCchhHHHHHHHHHcCeeEEEecccc
Q psy14856 437 DYMNIINGDQGGKGIW---NVPYITNCYLMKTSVIKATNIK-------TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQE 506 (734)
Q Consensus 437 dy~~i~~~~~~~~G~~---nVP~v~~~~LI~~~vL~~~~~~-------~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~ 506 (734)
.|..++...+ ..| .-++.+++.+|++++|.+ ... ..|....+-||..+..+++.+|+.+.+.+...
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~G~~~~~Rr~al~~-~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~ 227 (254)
T cd04191 152 LYGPVFGRGL---AAWQGGEGNYWGHNAIIRVAAFME-HCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE 227 (254)
T ss_pred HHHHHHHHHH---HHhcCCccCccceEEEEEHHHHHH-hcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence 2334333211 112 235678889999999976 211 23445568999999999999999999998654
Q ss_pred eEEeeccCC
Q psy14856 507 YGHLVDSEN 515 (734)
Q Consensus 507 ~G~l~~~~~ 515 (734)
-.+-..|++
T Consensus 228 ~~~~~~p~~ 236 (254)
T cd04191 228 GSYEECPPT 236 (254)
T ss_pred ceEeECCCC
Confidence 334444554
No 48
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.26 E-value=6.2e-11 Score=124.20 Aligned_cols=186 Identities=13% Similarity=0.146 Sum_probs=121.9
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcc---cCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANL---NYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~L---dYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~a 366 (734)
|+|+|+||+||++..|+++|+||.++ .|++.++ |+|++ |+|.|.++++++..+ ..++++..+ +.|.+.|
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~Ei-IVvDdgStD~t~~i~~~~~~~-----~~i~~i~~~-~~G~~~A 73 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEW-IVVDGGSNDGTREFLENLNGI-----FNLRFVSEP-DNGIYDA 73 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEE-EEEECcCcccHHHHHHHhccc-----CCEEEEECC-CCCHHHH
Confidence 78999999999999999999999864 3555444 33444 999999999887532 247888754 6699999
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCc--eeeecccCCCcccccccccccCCcc-ccchHHHHH
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNES--LIAPLLVRPFKAWSNFWGALNADGF-YARSFDYMN 440 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~--IVaP~l~~~~~~wsNFWgal~~~Gy-Y~Rsedy~~ 440 (734)
+|.|++.| ++||++++|+|.++. |++++.+.+ .+.. +++..+.. + ++|. ..|...- .
T Consensus 74 ~N~Gi~~a---~g~~v~~ld~DD~~~-~~~~~~~~~~~~~~~~~~v~g~~~~~-------~-----~~~~~~~~~~~~-~ 136 (248)
T PRK10063 74 MNKGIAMA---QGRFALFLNSGDIFH-QDAANFVRQLKMQKDNAMIIGDALLD-------F-----GDGHKIKRSAKP-G 136 (248)
T ss_pred HHHHHHHc---CCCEEEEEeCCcccC-cCHHHHHHHHHhCCCCeEEEeeeEEE-------c-----CCCcEEEEccCC-h
Confidence 99999986 699999999999997 876543332 2222 12222110 0 0110 0110000 0
Q ss_pred HHhcccCCcceeeeceeeeEEeeehhhHhhccccccccc-CCCchhHHHHHHHHHcCeeEEEecccceEEee
Q psy14856 441 IINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTL-NSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLV 511 (734)
Q Consensus 441 i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~-~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~ 511 (734)
. .-.+..|..|.+++++++.++. . .|+. ....+|-.|..++-.+|..+...+....-|-+
T Consensus 137 -----~--~~~~~~~~~~~~~~~~~~~~~~-~---~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~y~~ 197 (248)
T PRK10063 137 -----W--YIYHSLPASHQAIFFPVSGLKK-W---RYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSEFSM 197 (248)
T ss_pred -----h--HHhcCCCCCCcEEEEEHHHHhc-C---CCCcccchHHhHHHHHHHHHcCCcEEEcCceeEEEeC
Confidence 0 0111345567788889998886 2 3542 34568999999998899877766655554443
No 49
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.23 E-value=3.9e-11 Score=113.63 Aligned_cols=100 Identities=20% Similarity=0.384 Sum_probs=85.3
Q ss_pred EEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 294 LISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 294 ~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
+|+||++|++..|+++|+||.++.++..+|.| ++| |+|.|.++++++.+ ....++++..+++.|.++++|.|++
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~~~~~~~~~~~----~~~~i~~i~~~~n~g~~~~~n~~~~ 75 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIV-VDDGSTDETEEILEEYAE----SDPNIRYIRNPENLGFSAARNRGIK 75 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEE-EECS-SSSHHHHHHHHHC----CSTTEEEEEHCCCSHHHHHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEE-eccccccccccccccccc----ccccccccccccccccccccccccc
Confidence 68999999999999999999999888877743 444 88999999999886 3468999999999999999999999
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.| .+||++++|+|.++. |++|+.|++
T Consensus 76 ~a---~~~~i~~ld~D~~~~-~~~l~~l~~ 101 (169)
T PF00535_consen 76 HA---KGEYILFLDDDDIIS-PDWLEELVE 101 (169)
T ss_dssp H-----SSEEEEEETTEEE--TTHHHHHHH
T ss_pred cc---ceeEEEEeCCCceEc-HHHHHHHHH
Confidence 96 588999999999998 999999996
No 50
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.21 E-value=6.6e-11 Score=115.84 Aligned_cols=101 Identities=11% Similarity=0.158 Sum_probs=85.5
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-c-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-N-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
|+||+||++..|.++|++|.++.|+....+|+|. | |+|.+.++++++.++. ..++++..+++.|.+.|+|.|++
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~----~~~~~~~~~~n~G~~~a~n~g~~ 76 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARV----PRVRVIRLSRNFGKGAAVRAGFK 76 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhC----CCeEEEEccCCCCccHHHHHHHH
Confidence 5799999999999999999999984334444344 4 8899999999887654 45688889999999999999998
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
.| .+||++++|+|..+. |+.|+.|++.
T Consensus 77 ~a---~gd~i~~lD~D~~~~-~~~l~~l~~~ 103 (185)
T cd04179 77 AA---RGDIVVTMDADLQHP-PEDIPKLLEK 103 (185)
T ss_pred Hh---cCCEEEEEeCCCCCC-HHHHHHHHHH
Confidence 86 479999999999997 9999999974
No 51
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.19 E-value=5e-11 Score=112.82 Aligned_cols=100 Identities=20% Similarity=0.302 Sum_probs=85.1
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENS 374 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a 374 (734)
|+||++|++..|.++|++|.++.|+..++.|..+.|+|.|.++++++..+.. ..+.++..+++.|.+.++|.|++.+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~n~~~~~~ 77 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYI---RRVLVVRDKENGGKAGALNAGLRHA 77 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhcccc---ceEEEEEecccCCchHHHHHHHHhc
Confidence 5799999999999999999999998877754333489999999988765431 3466777788999999999999886
Q ss_pred hhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 375 LHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 375 ~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
++||++++|+|..+. |+.|+.++
T Consensus 78 ---~~~~i~~~D~D~~~~-~~~l~~~~ 100 (180)
T cd06423 78 ---KGDIVVVLDADTILE-PDALKRLV 100 (180)
T ss_pred ---CCCEEEEECCCCCcC-hHHHHHHH
Confidence 799999999999997 99999995
No 52
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.19 E-value=4.1e-10 Score=132.55 Aligned_cols=201 Identities=16% Similarity=0.206 Sum_probs=134.6
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHH-HcccCCCceEEEEEe--cCCCCcHHHHHHHHHHhccCcceEEEEeC--CCCCc
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKI-ANLNYPAKKISMFVY--NNQEYHAPLFDDYIHNFKTMFKNVKYIAH--NSTVN 362 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL-~~LdYPk~ri~l~I~--ns~D~t~~il~~f~~~~~~~y~~V~ii~~--~~~~g 362 (734)
.+.|.|+|.||+|||+.+|++.++++ .+||||+. +|++. .|...|.+.+++...+ |+.++++.. ..+.+
T Consensus 68 ~~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~--~I~v~~~~nD~~T~~~~~~~~~~----~p~~~~v~~~~~gp~g 141 (703)
T PRK15489 68 RDEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRY--VIFVGTYPNDAETITEVERMRRR----YKRLVRVEVPHDGPTC 141 (703)
T ss_pred cCCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCe--EEEEEecCCCccHHHHHHHHhcc----CCcEEEEEcCCCCCCC
Confidence 35689999999999999999999997 59999975 45553 3667888888876654 345555443 34478
Q ss_pred HHHHHHHHHHhhhh----cC--ccEEEEECCCccCCChHHHHHHHHc--CCc-eeeecccCCCcccccccccccCCcccc
Q psy14856 363 SKEARNLAVENSLH----KG--VDFYFYVDSDSHLDNPDVLKYLVNR--NES-LIAPLLVRPFKAWSNFWGALNADGFYA 433 (734)
Q Consensus 363 ~a~arN~al~~a~~----~~--~DYlf~vDAD~~L~np~tL~~LI~~--nk~-IVaP~l~~~~~~wsNFWgal~~~GyY~ 433 (734)
|+.|.|.|+..+.+ .. .+.+++.|||.+++ |+.|+.+-.. ++. +-+|++... .-|+|+-+..-...|..
T Consensus 142 Ka~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~~~~~~~~~~~iQ~pV~~~~-~~~~~~l~~~~~~Efa~ 219 (703)
T PRK15489 142 KADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKYFNYLLPRKDLVQLPVLSLE-RKWYEWVAGTYMDEFAE 219 (703)
T ss_pred HHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHHHHhhcCCcceeeeeeccCC-CccccHHHHHHHHHHHH
Confidence 99999999988633 12 34599999999998 9999877432 333 444666432 33556433321112211
Q ss_pred chHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhc--ccc-cccccCCCchhHHHHHHHHHcCeeEEE
Q psy14856 434 RSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKAT--NIK-TIYTLNSMDYDMAFCTNLRNKGIHLKI 501 (734)
Q Consensus 434 Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~--~~~-~~f~~~~~deDm~Fc~~ar~~Gi~myv 501 (734)
. ... .++.+.+ .| ..||.=+....+++++|+.. ++. ..|+...+.||++|..++..+|+....
T Consensus 220 ~-~~~-~l~~r~~--l~-~~ipl~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f 285 (703)
T PRK15489 220 W-HQK-DLVVRES--LT-GTVPSAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIF 285 (703)
T ss_pred H-hhh-HHHHHHH--cC-CceeccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEE
Confidence 1 111 1233333 33 23565455667899998751 111 358778899999999999999998765
No 53
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.19 E-value=8.7e-10 Score=120.53 Aligned_cols=201 Identities=12% Similarity=0.114 Sum_probs=127.3
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcc------cCCCceEEEE-Eec-CCCCcHHHHHHHHHHhccCcceEEEEeCCC
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANL------NYPAKKISMF-VYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNS 359 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~L------dYPk~ri~l~-I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~ 359 (734)
+..|.|+|+||+||+++.|+++|+++.++ ++|....+++ |+| |+|.|.++++++.++....-..++++..+.
T Consensus 67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~ 146 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLR 146 (333)
T ss_pred CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCC
Confidence 35689999999999999999999998763 2344345543 444 999999999999876421123589999999
Q ss_pred CCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc-------CCceeeeccc-CCCcccccccccccCCcc
Q psy14856 360 TVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR-------NESLIAPLLV-RPFKAWSNFWGALNADGF 431 (734)
Q Consensus 360 ~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~-------nk~IVaP~l~-~~~~~wsNFWgal~~~Gy 431 (734)
|.|++.|+|.|++.| .+||++++|||...+ |+.+..|++. +.++|..--. ..+. ........
T Consensus 147 N~G~~~A~~~Gi~~a---~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~------~~~~~~~~ 216 (333)
T PTZ00260 147 NKGKGGAVRIGMLAS---RGKYILMVDADGATD-IDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDS------DVVAKRKW 216 (333)
T ss_pred CCChHHHHHHHHHHc---cCCEEEEEeCCCCCC-HHHHHHHHHHHHHhhccCCceEEeeccccccC------cccccCcH
Confidence 999999999999875 589999999999997 9998888863 2223332111 0000 00001112
Q ss_pred ccchHHH-HHHHhcccCCcceeeecee-eeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 432 YARSFDY-MNIINGDQGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 432 Y~Rsedy-~~i~~~~~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
|.+--.. ...+.+.. .|. +++-. .+-.++++++++. .. +......+..|+.+...|+++|+.+.--.
T Consensus 217 ~r~~~~~~~~~l~~~~--~~~-~i~D~~~Gfk~~~r~~~~~-i~-~~~~~~~~~fd~Ell~~a~~~g~~I~EvP 285 (333)
T PTZ00260 217 YRNILMYGFHFIVNTI--CGT-NLKDTQCGFKLFTRETARI-IF-PSLHLERWAFDIEIVMIAQKLNLPIAEVP 285 (333)
T ss_pred HHHHHHHHHHHHHHHH--cCC-CcccCCCCeEEEeHHHHHH-Hh-hhccccCccchHHHHHHHHHcCCCEEEEc
Confidence 2221111 11111111 222 22212 2335889999886 21 11122346678999999999998664443
No 54
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.18 E-value=2.1e-10 Score=114.66 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=80.8
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeC---CCCCcHHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAH---NSTVNSKEARNLAV 371 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~---~~~~g~a~arN~al 371 (734)
|+||+||++..|+++|++|.+++ |+.+|.+..++|+|.|.++++ +. ..++.++++.. ..+.|++.|+|.|+
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~eIivvdd~S~D~t~~~~~-~~----~~~~~v~~i~~~~~~~~~Gk~~aln~g~ 74 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNFLVLVIDDASDDDTAGIVR-LA----ITDSRVHLLRRHLPNARTGKGDALNAAY 74 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCeEEEEEECCCCcCHHHHHh-he----ecCCcEEEEeccCCcCCCCHHHHHHHHH
Confidence 68999999999999999999999 876654333349999999887 21 12356787764 35679999999999
Q ss_pred Hhhhh--------cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 372 ENSLH--------KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 372 ~~a~~--------~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
+.++. ..+||++++|||+.++ |++|+.+.+
T Consensus 75 ~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~ 112 (191)
T cd06436 75 DQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAP 112 (191)
T ss_pred HHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHH
Confidence 98753 1358999999999998 999999776
No 55
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.17 E-value=1.4e-10 Score=125.56 Aligned_cols=159 Identities=16% Similarity=0.104 Sum_probs=116.1
Q ss_pred ceecCCCCChHH----HHHHHHHHHH----hC--CCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHHHHhhchh
Q psy14856 560 DVFWFPIVTEKF----CHEFVQIMEA----YG--QWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPL 629 (734)
Q Consensus 560 ~Vy~fpv~s~~f----C~~Li~e~E~----~g--~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l~~~v~P~ 629 (734)
++....+||+.. =..|+++++. +- .|+.++-.+. ..|+|-+...+..-.|+-++....+-+.++|+++
T Consensus 10 ~~l~vh~Fsd~~f~~~K~~~~~~i~~~~~n~~~~~~~~s~i~~~--~~g~e~~~~~~~ksKqii~e~~La~~L~erlr~l 87 (418)
T PHA02869 10 NQLAVHRFTETRFTSFKKELLVNLGISDLNDIKNICEDSKIFFP--EKRTELLSIKDRKSKQIVFENSLNDDLLKKLHAL 87 (418)
T ss_pred CeEEEEEecHHHHHHHHHHHHHHhccccccccccccccceeecc--ccCceeEeeccccceeEEechHHHHHHHHHHHHh
Confidence 345667788873 3455555551 11 4666663332 1233434444555567777777777777788887
Q ss_pred hhhhhcCC-CCCCCCCcceeEEEEcCCCCCCCCccccC--------CceEEEEEecCCCCcCCCccEEEeeccceeeccc
Q psy14856 630 QEREFIGY-HHEPVRAPMSFVVRYRPDEQPSLRPHHDS--------STYTINIALNQVGVDYEGGGCRFIRYNCNVTATR 700 (734)
Q Consensus 630 ~~~~f~~~-~~~~l~~~~~fvvrY~~~~~~~l~~H~D~--------S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~ 700 (734)
+..-|.+. .... -.++..++||+||+. |.+|+|. |.+|+.++||+ .++||+|.|.-.......|+
T Consensus 88 Lp~~lk~~v~~V~-lnerirfyrY~kGq~--F~~H~Dg~~~rs~e~s~~tLLLYLNd---~~~GGET~f~~~~~~sI~pk 161 (418)
T PHA02869 88 IYDELSTVVDSVT-VENTVTLIMYEKGDY--FARHRDFSTVFSKNIICVHLLLYLEQ---PETGGETVIYIDNNTSVKLK 161 (418)
T ss_pred hhHHhhCccceEE-EcceEEEEEECCCCc--ccccccCceecCCCEEEEEEEEEEec---cCCCCceEEEeCCCceEecC
Confidence 77777653 2233 467899999999986 9999996 55999999999 89999999987555566799
Q ss_pred ceeEEEeCCCcccccCcccCCceeEEEEEe
Q psy14856 701 MGWMLMHPGRLTHYHEGLQVTQGTRYIMIS 730 (734)
Q Consensus 701 ~G~al~h~g~lth~H~g~~vT~G~Ryilv~ 730 (734)
.| |||.+++ .|+|.+|++|++|+|++
T Consensus 162 sg--LLFdh~l--~Heg~~V~sG~KyVart 187 (418)
T PHA02869 162 TD--HLFDKTI--EHESITVESGRKCVALF 187 (418)
T ss_pred CC--eEecccc--ccCCcEeecCeEEEEEE
Confidence 99 9999987 89999999999999986
No 56
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.16 E-value=1.3e-10 Score=120.93 Aligned_cols=168 Identities=18% Similarity=0.187 Sum_probs=102.9
Q ss_pred EEEEecCCh-hHHHHHHHHHHcccCC--------CceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856 295 ISVFIDKPT-AFLEEFLNKIANLNYP--------AKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 295 I~I~i~n~~-~~L~~fL~sL~~LdYP--------k~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~ 363 (734)
|+||+|||+ .+|+++|+||++|+|| +++++|+|.+ |+| .+.|+
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d--------------------------~~~gk 54 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK--------------------------KNRGK 54 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc--------------------------ccCcc
Confidence 689999996 8999999999999999 7888876653 666 23344
Q ss_pred HH-------HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceee--ecc-cCCCcccccccccccCCc
Q psy14856 364 KE-------ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIA--PLL-VRPFKAWSNFWGALNADG 430 (734)
Q Consensus 364 a~-------arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVa--P~l-~~~~~~wsNFWgal~~~G 430 (734)
.. +.|.++.. +++||++++|||++++ |++|+.|++ .+..+.+ ..+ .... -+++|..+..-.
T Consensus 55 ~~~~~~~~~~~~~~~~~---a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~vg~v~g~~~~~~~--~~~~~~~~q~~e 128 (244)
T cd04190 55 RDSQLWFFNYFCRVLFP---DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPEIGGVCGEIHPMGK--KQGPLVMYQVFE 128 (244)
T ss_pred hHHHHHHHHHHHHHhhc---CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCCEEEEEeeeEEcCC--cchhHHHhHhee
Confidence 33 23333332 5899999999999997 999999996 3554432 222 1111 124443321111
Q ss_pred cccchHHHHHHHhcccCCcceeeeceee-eEEeeehhhHhhcccc--cc-----cc-----------cCCCchhHHHHHH
Q psy14856 431 FYARSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIK--TI-----YT-----------LNSMDYDMAFCTN 491 (734)
Q Consensus 431 yY~Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~--~~-----f~-----------~~~~deDm~Fc~~ 491 (734)
| ..+ .++...-... .|. ++.+. ++.++++++|+. ... .. |. ...+.||+.++.+
T Consensus 129 y-~~~-~~~~~~~~s~--~g~--~~~~~G~~~~~R~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~ 201 (244)
T cd04190 129 Y-AIS-HWLDKAFESV--FGF--VTCLPGCFSMYRIEALKG-DNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTL 201 (244)
T ss_pred h-hhh-hhhcccHHHc--CCc--eEECCCceEEEEehhhcC-CccccccchhhccccCcccchHHHHHHhHhcccceeHH
Confidence 1 100 1111110111 232 33343 466899999987 321 10 00 1236899999999
Q ss_pred HHHcCeeEEE
Q psy14856 492 LRNKGIHLKI 501 (734)
Q Consensus 492 ar~~Gi~myv 501 (734)
+..+|+.+.+
T Consensus 202 l~~~G~~~~~ 211 (244)
T cd04190 202 LLKAGPKRKY 211 (244)
T ss_pred HhccCCccEE
Confidence 9999998876
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.14 E-value=1.4e-09 Score=116.05 Aligned_cols=197 Identities=17% Similarity=0.292 Sum_probs=118.9
Q ss_pred EEEEEecCChh------HHHHHHHHHHc-ccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCC---CCCc
Q psy14856 294 LISVFIDKPTA------FLEEFLNKIAN-LNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHN---STVN 362 (734)
Q Consensus 294 ~I~I~i~n~~~------~L~~fL~sL~~-LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~---~~~g 362 (734)
||+||+++... -+..+|.++.+ +..+..+| |++++ |.+.+.+.++++.++.. .++++..+ +..+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~ei-Ivvd~~s~~~~~~~l~~~~~~~~----~~~~i~~~~~~~~f~ 75 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEI-IVVDDGSSDEFDEELKKLCEKNG----FIRYIRHEDNGEPFS 75 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEE-EEEECCCchhHHHHHHHHHhccC----ceEEEEcCCCCCCcC
Confidence 58999999974 24444677766 33344333 33444 55556677888877654 22234333 3458
Q ss_pred HHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---c---C--CceeeecccCCCcccccccccccCCccccc
Q psy14856 363 SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---R---N--ESLIAPLLVRPFKAWSNFWGALNADGFYAR 434 (734)
Q Consensus 363 ~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~---n--k~IVaP~l~~~~~~wsNFWgal~~~GyY~R 434 (734)
.++|||.|++.| ++||++|+|+|+++. |++|+.+++ . + ..++.|........-.++. ....+..+
T Consensus 76 ~a~arN~g~~~A---~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~---~~~~~~~~ 148 (281)
T PF10111_consen 76 RAKARNIGAKYA---RGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFY---SQFKNLWD 148 (281)
T ss_pred HHHHHHHHHHHc---CCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHh---hcchhcch
Confidence 999999999986 699999999999998 999999998 1 1 1234454421110000110 00011111
Q ss_pred hHHHHHHHhcccCCcceee-eceeeeEEeeehhhHhhcccc--cccccCCCchhHHHHHHHHHcCeeEEEecccce
Q psy14856 435 SFDYMNIINGDQGGKGIWN-VPYITNCYLMKTSVIKATNIK--TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEY 507 (734)
Q Consensus 435 sedy~~i~~~~~~~~G~~n-VP~v~~~~LI~~~vL~~~~~~--~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~ 507 (734)
....-+.... . ...|. ..+.++|++|+|+.+.+ .+. ..|. +.-.||.+|+.|+.++|..+..+.....
T Consensus 149 ~~~~~~~~~~-~--~~~~~~~~~~s~~~~i~r~~f~~-iGGfDE~f~-G~G~ED~D~~~RL~~~~~~~~~~~~~~~ 219 (281)
T PF10111_consen 149 HEFLESFISG-K--NSLWEFIAFASSCFLINREDFLE-IGGFDERFR-GWGYEDIDFGYRLKKAGYKFKRSPDYLV 219 (281)
T ss_pred HHHHHHHhhc-c--ccccccccccceEEEEEHHHHHH-hCCCCcccc-CCCcchHHHHHHHHHcCCcEecChHHhc
Confidence 1111122221 1 12222 34566999999999988 433 3442 2347999999999999988876664443
No 58
>PHA02813 hypothetical protein; Provisional
Probab=99.07 E-value=6.8e-10 Score=118.84 Aligned_cols=153 Identities=12% Similarity=0.150 Sum_probs=101.8
Q ss_pred eecCCCCChHH----HHHHHHHHH-HhCCCCCCCCCCcccCCCc---ccccccCeeeeccchHHHHHHHHHHhhchhhhh
Q psy14856 561 VFWFPIVTEKF----CHEFVQIME-AYGQWSDGTNNDKRLETGY---EAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQER 632 (734)
Q Consensus 561 Vy~fpv~s~~f----C~~Li~e~E-~~g~ws~~~~~~~r~~g~~---~~vpt~di~~~~~g~~~~~~~~l~~~v~P~~~~ 632 (734)
+....+|++.. =+.|+.+++ .--.|+.++-.+.+ .||- ..+++.+-.|-+ .. +-|.++|++++..
T Consensus 7 ~l~~~~F~~~~f~~~k~~l~~~i~~~d~~~~~s~i~~~~-~~ge~l~~~iRnNkrviid----~~--~~L~erIr~~Lp~ 79 (354)
T PHA02813 7 IIKVKTFNDDYFNNVKKIIMDMIKYKDIIWEESKVFDHE-KGGEVINTNERQCKQYIIR----GL--DDIFKVIRKKLLL 79 (354)
T ss_pred ceEEEEecHHHHHHHHHHHHHHHhccccCccccceeccc-cCceEEccccccceEEEEc----CH--HHHHHHHHHhhHH
Confidence 44566788873 345555555 11247776644333 2321 223333422222 21 3344555665555
Q ss_pred hhcCCCC---CCCCCcceeEEEEcCCCCCCCCccccC--------CceEEEEEecCCCCcCCCccEEEeeccceeecccc
Q psy14856 633 EFIGYHH---EPVRAPMSFVVRYRPDEQPSLRPHHDS--------STYTINIALNQVGVDYEGGGCRFIRYNCNVTATRM 701 (734)
Q Consensus 633 ~f~~~~~---~~l~~~~~fvvrY~~~~~~~l~~H~D~--------S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~ 701 (734)
-|.++.. .. -.++..++||+||+. |.+|+|. |.+|+.++||+ .++||+|.|.-.+.+.. .+
T Consensus 80 ~l~~~~lv~~V~-vnerirfyrY~kGq~--F~~H~Dg~~~r~k~~s~~tLLLYLN~---~~~GGeT~f~~~~~tsI--~~ 151 (354)
T PHA02813 80 SFEFPQKISDII-LDNTITLIKYEKGDF--FNNHRDFIHFKSKNCYCYHLVLYLNN---TSKGGNTNIHIKDNTIF--ST 151 (354)
T ss_pred HhcCCccceeEE-EcceEEEEEECCCcc--cCcccCCceeecCCceEEEEEEEEec---cCCCCceEEEcCCCceE--ee
Confidence 5554422 23 367899999999986 8999985 56999999999 89999999975544433 39
Q ss_pred eeEEEeCCCcccccCcccCCceeEEEEEe
Q psy14856 702 GWMLMHPGRLTHYHEGLQVTQGTRYIMIS 730 (734)
Q Consensus 702 G~al~h~g~lth~H~g~~vT~G~Ryilv~ 730 (734)
|.+|||.+++ .|+|.+|++|++|+|+.
T Consensus 152 g~dlLFdh~l--~Heg~~V~sG~KyVa~~ 178 (354)
T PHA02813 152 KNDVLFDKTL--NHSSDIITDGEKNIALI 178 (354)
T ss_pred cceEEEeccc--ccCCcEeccCeEEEEEE
Confidence 9999999997 89999999999999975
No 59
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.99 E-value=3.8e-09 Score=100.05 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=87.5
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
.|+|+|+||++|++..|.++++|+.++.|++.++ |++++ |+|.|.++++++..+. ..+.......+.|.+.|+|
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~ei-ivvddgs~d~t~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~ 76 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFEI-IVVDDGSTDGTTEIAIEYGAKD----VRVIRLINERNGGLGAARN 76 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceEE-EEEeCCCCCChHHHHHHHhhhc----ceEEEeecccCCChHHHHH
Confidence 5899999999999999999999999999999554 44444 9999999999988654 3566666788999999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcC
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~n 404 (734)
.++..+. +||+.++|+|.. . |+.+..+++..
T Consensus 77 ~~~~~~~---~~~~~~~d~d~~-~-~~~~~~~~~~~ 107 (291)
T COG0463 77 AGLEYAR---GDYIVFLDADDQ-H-PPELIPLVAAG 107 (291)
T ss_pred hhHHhcc---CCEEEEEccCCC-C-CHHHHHHHHHh
Confidence 9999874 599999999999 8 66655555443
No 60
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.92 E-value=3.9e-08 Score=116.59 Aligned_cols=215 Identities=16% Similarity=0.145 Sum_probs=133.2
Q ss_pred CCCCcEEEEEEecCChh-----HHHHHHHHHHcccCCCceEEEEEec-C-CCCcHHH----HHHHHHHhccCcceEEEEe
Q psy14856 288 DQFPSVLISVFIDKPTA-----FLEEFLNKIANLNYPAKKISMFVYN-N-QEYHAPL----FDDYIHNFKTMFKNVKYIA 356 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~-----~L~~fL~sL~~LdYPk~ri~l~I~n-s-~D~t~~i----l~~f~~~~~~~y~~V~ii~ 356 (734)
...|+|+|.||+|||++ .|+.+++++.+++||+ ++++||.+ + +|.+... ++++.++++. ...|.+..
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~ 198 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRR 198 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEE
Confidence 35689999999999986 6999999999999974 46655554 3 3333222 2344444432 34778877
Q ss_pred CCCCCcHHHHHHHHHHhhhh--cCccEEEEECCCccCCChHHHHHHHHc---CCceeeecccCCCcccccccccccCCcc
Q psy14856 357 HNSTVNSKEARNLAVENSLH--KGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLLVRPFKAWSNFWGALNADGF 431 (734)
Q Consensus 357 ~~~~~g~a~arN~al~~a~~--~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l~~~~~~wsNFWgal~~~Gy 431 (734)
..+|.+. ++-|.+- .++. .++||++.+|||.+++ ||+|++|+.. +..+..- -+.+ .....+..
T Consensus 199 R~~n~~~-KaGNl~~-~~~~~~~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~vGlV-Qt~~--------~~~n~~sl 266 (691)
T PRK05454 199 RRRNVGR-KAGNIAD-FCRRWGGAYDYMVVLDADSLMS-GDTLVRLVRLMEANPRAGLI-QTLP--------VAVGADTL 266 (691)
T ss_pred CCcCCCc-cHHHHHH-HHHhcCCCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcCEEEE-eCCc--------cCcCCCCH
Confidence 7767653 4445542 2222 4679999999999998 9999999962 4432221 1110 11123345
Q ss_pred ccchHHHHHHHhcc--cCCccee---eeceeeeEEeeehhhHhhcccc------cccccCCCchhHHHHHHHHHcCeeEE
Q psy14856 432 YARSFDYMNIINGD--QGGKGIW---NVPYITNCYLMKTSVIKATNIK------TIYTLNSMDYDMAFCTNLRNKGIHLK 500 (734)
Q Consensus 432 Y~Rsedy~~i~~~~--~~~~G~~---nVP~v~~~~LI~~~vL~~~~~~------~~f~~~~~deDm~Fc~~ar~~Gi~my 500 (734)
+.|...+...+-.. ..+...| .-.|.+...+|+++++.+..+. .-|....+.||+..+..++.+|+.+.
T Consensus 267 faR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~ 346 (691)
T PRK05454 267 FARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVW 346 (691)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEE
Confidence 56655543221100 0000111 2245567789999999761211 34556779999999999999999999
Q ss_pred EecccceEEeeccCCC
Q psy14856 501 IDSTQEYGHLVDSENF 516 (734)
Q Consensus 501 v~N~~~~G~l~~~~~~ 516 (734)
+.+...-.|--.|+++
T Consensus 347 ~~pd~~~~~ee~P~tl 362 (691)
T PRK05454 347 LAPDLPGSYEELPPNL 362 (691)
T ss_pred EcCccccccccCCCCH
Confidence 8887432233446554
No 61
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.91 E-value=8.3e-09 Score=106.24 Aligned_cols=93 Identities=16% Similarity=0.245 Sum_probs=78.2
Q ss_pred cEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 292 SVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
+|+|+|+++|++..|++||+||..+. ++|. +|++ |+|.|.++++++ .++++.. .+.|.+.++|.|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~eii-vvD~gStD~t~~i~~~~---------~~~v~~~-~~~g~~~~~n~~ 66 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---DEII-VVDSGSTDRTVEIAKEY---------GAKVYQR-WWDGFGAQRNFA 66 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---CEEE-EEeCCCCccHHHHHHHc---------CCEEEEC-CCCChHHHHHHH
Confidence 48999999999999999999998772 3553 3444 999999888732 4677766 788999999999
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
++.| .+||++++|||.+++ |+.+..|.+
T Consensus 67 ~~~a---~~d~vl~lDaD~~~~-~~~~~~l~~ 94 (229)
T cd02511 67 LELA---TNDWVLSLDADERLT-PELADEILA 94 (229)
T ss_pred HHhC---CCCEEEEEeCCcCcC-HHHHHHHHH
Confidence 9886 589999999999998 999998886
No 62
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.91 E-value=1.2e-08 Score=111.28 Aligned_cols=113 Identities=12% Similarity=0.160 Sum_probs=89.0
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHc---ccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIAN---LNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~---LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
.++|+|+||+|||+..|+++++++.+ +-.+..+| |+|++ |+|.|.++++++.++.+ ..++.+..+.+.|++.
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EI-IvVDDgS~D~T~~il~~~~~~~~---~~v~~i~~~~n~G~~~ 80 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEI-LLIDDGSSDNSAEMLVEAAQAPD---SHIVAILLNRNYGQHS 80 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEE-EEEeCCCCCcHHHHHHHHHhhcC---CcEEEEEeCCCCCHHH
Confidence 47899999999999999999998864 22333344 44555 99999999998775432 3566666778899999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeee
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAP 410 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP 410 (734)
|.+.|++.| ++||++++|||...+ |+.+..|++. +.++|..
T Consensus 81 A~~~G~~~A---~gd~vv~~DaD~q~~-p~~i~~l~~~~~~~~DvV~~ 124 (325)
T PRK10714 81 AIMAGFSHV---TGDLIITLDADLQNP-PEEIPRLVAKADEGYDVVGT 124 (325)
T ss_pred HHHHHHHhC---CCCEEEEECCCCCCC-HHHHHHHHHHHHhhCCEEEE
Confidence 999999886 699999999999997 9999999974 4455543
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.91 E-value=8.5e-09 Score=101.25 Aligned_cols=108 Identities=13% Similarity=0.153 Sum_probs=87.6
Q ss_pred EEEEecCChhHHHHHHHHHHccc---CCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLN---YPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~Ld---YPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
|+||+||++..|+++|++|.++. ++..+|.+ +++ |+|.|.++++++.++. +.++++...++.|.+.|+|.|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiiv-vdd~s~d~t~~~~~~~~~~~----~~i~~i~~~~n~G~~~a~n~g 75 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIF-VDDGSTDRTLEILRELAARD----PRVKVIRLSRNFGQQAALLAG 75 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEE-EeCCCCccHHHHHHHHHhhC----CCEEEEEecCCCCcHHHHHHH
Confidence 58999999999999999987654 56655533 444 8999999999887653 478888888899999999999
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeeec
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPL 411 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~ 411 (734)
++.| .+||++++|+|..+. |+.|+.|++. +..+|.+.
T Consensus 76 ~~~a---~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~~~v~g~ 115 (181)
T cd04187 76 LDHA---RGDAVITMDADLQDP-PELIPEMLAKWEEGYDVVYGV 115 (181)
T ss_pred HHhc---CCCEEEEEeCCCCCC-HHHHHHHHHHHhCCCcEEEEE
Confidence 9886 579999999999997 9999999973 44455443
No 64
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=98.85 E-value=1.3e-08 Score=99.56 Aligned_cols=157 Identities=18% Similarity=0.287 Sum_probs=99.8
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeecc-chHHHHHHHHHHhhchhhhhhhcCCCCCC
Q psy14856 563 WFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQV-GLAGVWAEFLRKYVVPLQEREFIGYHHEP 641 (734)
Q Consensus 563 ~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~-g~~~~~~~~l~~~v~P~~~~~f~~~~~~~ 641 (734)
.+.|||++.|.++.+..|+ +.|..|..+ .|..-+.-+....+.+- .+..+..+.+.+.+.- ..+|-+-. -+
T Consensus 7 Ip~VLs~a~va~iRa~l~~-A~w~dGrat----~g~q~a~vk~n~qlp~~s~l~~~vg~~il~al~~--~plff~aA-Lp 78 (229)
T COG3128 7 IPEVLSEAQVARIRAALEQ-AEWVDGRAT----QGPQGAQVKNNLQLPQDSALARELGNEILQALTA--HPLFFAAA-LP 78 (229)
T ss_pred chhhCCHHHHHHHHHHHhh-ccccccccc----cCcchhhhhccccCCcccHHHHHHHHHHHHHHHh--chhHHHhh-cc
Confidence 3468999999999999998 467777632 11111111122222221 2333444433332211 11111110 01
Q ss_pred CCCcceeEEEEcCCCCCCCCccccC--------------CceEEEEEecCCCCcCCCccEEEee-ccceeecccceeEEE
Q psy14856 642 VRAPMSFVVRYRPDEQPSLRPHHDS--------------STYTINIALNQVGVDYEGGGCRFIR-YNCNVTATRMGWMLM 706 (734)
Q Consensus 642 l~~~~~fvvrY~~~~~~~l~~H~D~--------------S~~T~ni~Ln~~~~dfeGGg~~F~~-~~~~v~~~~~G~al~ 706 (734)
+...--.+-||..+.+ +++|.|+ +.++.|.-|++|. ||+||++...+ |+-..++-+.|..|+
T Consensus 79 ~t~~~P~Fn~Y~eg~~--f~fHvDgavr~~hp~~~~~lrtdls~tlfl~DPe-dYdGGeLVv~dtYg~h~VklPAGdLVl 155 (229)
T COG3128 79 RTCLPPLFNRYQEGDF--FGFHVDGAVRSIHPGSGFRLRTDLSCTLFLSDPE-DYDGGELVVNDTYGNHRVKLPAGDLVL 155 (229)
T ss_pred cccCCchhhhccCCCc--ccccccCcccccCCCCCceeEeeeeeeeecCCcc-ccCCceEEEeccccceEEeccCCCEEE
Confidence 1223345678977665 8899994 2377888899995 99999999976 444455577899999
Q ss_pred eCCCcccccCcccCCceeEEEEEeee
Q psy14856 707 HPGRLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 707 h~g~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
+|+. -+|+..|||+|.|+..++|+
T Consensus 156 ypSt--SlH~VtPVTRg~R~asffW~ 179 (229)
T COG3128 156 YPST--SLHEVTPVTRGERFASFFWI 179 (229)
T ss_pred cccc--cceeccccccCceEEEeeeh
Confidence 9996 58999999999999999996
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.84 E-value=1.2e-08 Score=110.44 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=81.7
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccC--CCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEE-eCCCCCcHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNY--PAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYI-AHNSTVNSK 364 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdY--Pk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii-~~~~~~g~a 364 (734)
..|+|+|+||+||++..|.+++++|.++.+ ...+| |+|++ |+|.|.++++++..+. ++..+++ ....+.|++
T Consensus 29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~ia~~~~~~v---~~~~~~~~~~~~n~Gkg 104 (306)
T PRK13915 29 AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAERAAAAGARV---VSREEILPELPPRPGKG 104 (306)
T ss_pred CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHHHHHHhcchh---hcchhhhhccccCCCHH
Confidence 468999999999999999999999998765 23444 33444 9999999988764321 1112222 235688999
Q ss_pred HHHHHHHHhhhhcCccEEEEECCCcc-CCChHHHHHHHH
Q psy14856 365 EARNLAVENSLHKGVDFYFYVDSDSH-LDNPDVLKYLVN 402 (734)
Q Consensus 365 ~arN~al~~a~~~~~DYlf~vDAD~~-L~np~tL~~LI~ 402 (734)
.|.|.|++.| ++||++++|||.. ++ |+.|..|++
T Consensus 105 ~A~~~g~~~a---~gd~vv~lDaD~~~~~-p~~l~~l~~ 139 (306)
T PRK13915 105 EALWRSLAAT---TGDIVVFVDADLINFD-PMFVPGLLG 139 (306)
T ss_pred HHHHHHHHhc---CCCEEEEEeCccccCC-HHHHHHHHH
Confidence 9999999775 6899999999997 75 999999986
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.80 E-value=1.3e-07 Score=87.21 Aligned_cols=149 Identities=19% Similarity=0.279 Sum_probs=107.1
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVEN 373 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~ 373 (734)
|+||++|+.+.|.++++++.++.|+..++.+ +++ +++.+.+.+.+..+. ...+..+...++.+.+.++|.|++.
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 75 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKK----DPRVIRVINEENQGLAAARNAGLKA 75 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhc----CCCeEEEEecCCCChHHHHHHHHHH
Confidence 5799999999999999999999997766644 444 777788777776543 2345666677788999999999988
Q ss_pred hhhcCccEEEEECCCccCCChHHHHHHHHc---CCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcc
Q psy14856 374 SLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKG 450 (734)
Q Consensus 374 a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G 450 (734)
+ .+||++++|+|..+. |+.+..++.. ++... ++. +
T Consensus 76 ~---~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~~~--~v~------------------------------------~ 113 (156)
T cd00761 76 A---RGEYILFLDADDLLL-PDWLERLVAELLADPEAD--AVG------------------------------------G 113 (156)
T ss_pred h---cCCEEEEECCCCccC-ccHHHHHHHHHhcCCCce--EEe------------------------------------c
Confidence 6 699999999999997 9988876321 11111 110 0
Q ss_pred eeeeceeeeEEeeehhhHhhcccccccc--cCCCchhHHHHHHHHHcCeeEE
Q psy14856 451 IWNVPYITNCYLMKTSVIKATNIKTIYT--LNSMDYDMAFCTNLRNKGIHLK 500 (734)
Q Consensus 451 ~~nVP~v~~~~LI~~~vL~~~~~~~~f~--~~~~deDm~Fc~~ar~~Gi~my 500 (734)
+ +++++++++++. ... +. ....++|..++.++.+.|...+
T Consensus 114 ----~---~~~~~~~~~~~~-~~~--~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 114 ----P---GNLLFRRELLEE-IGG--FDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred ----c---chheeeHHHHHH-hCC--cchHhcCCcchHHHHHHHHhhccccc
Confidence 0 556888888876 221 11 1113789999999998876544
No 67
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=98.71 E-value=9.9e-09 Score=92.10 Aligned_cols=81 Identities=25% Similarity=0.438 Sum_probs=61.6
Q ss_pred eEEEEcCCCCCCCCccccC-----CceEEEEEecCCCCcCCCccEEEeecc----c-eeec-----ccceeEEEeCC-Cc
Q psy14856 648 FVVRYRPDEQPSLRPHHDS-----STYTINIALNQVGVDYEGGGCRFIRYN----C-NVTA-----TRMGWMLMHPG-RL 711 (734)
Q Consensus 648 fvvrY~~~~~~~l~~H~D~-----S~~T~ni~Ln~~~~dfeGGg~~F~~~~----~-~v~~-----~~~G~al~h~g-~l 711 (734)
-+.+|.++. ++.||.|. ..+|+.++||++..+++||+|.|.... + .... |+.|.+++|++ +
T Consensus 2 ~~~~y~~G~--~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~~~- 78 (100)
T PF13640_consen 2 QLNRYPPGG--FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPSDN- 78 (100)
T ss_dssp EEEEEETTE--EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEESCT-
T ss_pred EEEEECcCC--EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeCCC-
Confidence 467886665 59999998 459999999975335899999998631 2 2233 99999999999 6
Q ss_pred ccccCcccC-CceeEEEEEeee
Q psy14856 712 THYHEGLQV-TQGTRYIMISFV 732 (734)
Q Consensus 712 th~H~g~~v-T~G~Ryilv~F~ 732 (734)
.+|++.|+ ..|+|+++++|+
T Consensus 79 -~~H~v~~v~~~~~R~~l~~~~ 99 (100)
T PF13640_consen 79 -SLHGVTPVGEGGRRYSLTFWF 99 (100)
T ss_dssp -CEEEEEEE-EESEEEEEEEEE
T ss_pred -CeecCcccCCCCCEEEEEEEE
Confidence 48999999 999999999996
No 68
>KOG2978|consensus
Probab=98.21 E-value=2.5e-05 Score=77.42 Aligned_cols=196 Identities=13% Similarity=0.128 Sum_probs=127.1
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCC--CceEE-EEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYP--AKKIS-MFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYP--k~ri~-l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~a 366 (734)
++-+|++|.|||-+.|+-++.-+.+ -.| ..+.+ |+|++ |.|.|.+.+++..+.++. .+|.++.....+|-..|
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~-~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~--d~i~l~pR~~klGLgtA 79 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAK-YMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGE--DNILLKPRTKKLGLGTA 79 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHh-hhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCC--CcEEEEeccCcccchHH
Confidence 5679999999999999944444433 223 33344 34454 999999999998888875 37888887888898999
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCcccccccccccCCccccchHHHHHHH
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNII 442 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~ 442 (734)
--.|++.| .+||++++|||.--+ |.++.++|+. |-+||+.--..++.--+. |.- .--...|...++...
T Consensus 80 y~hgl~~a---~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~~~div~GTRYa~~ggV~g-W~m--kRk~IS~gAn~la~~ 152 (238)
T KOG2978|consen 80 YIHGLKHA---TGDFIVIMDADLSHH-PKFIPEFIRLQKEGNYDIVLGTRYAGGGGVYG-WDM--KRKIISRGANFLARI 152 (238)
T ss_pred HHhhhhhc---cCCeEEEEeCccCCC-chhHHHHHHHhhccCcceeeeeeEcCCCceec-chh--hHHHHhhhhHHHHHH
Confidence 99999886 699999999999987 9999999974 336665433222210011 210 001124445554432
Q ss_pred hcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 443 NGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 443 ~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
--+ +|+ -|+-++-=|-++.+|+. ... --.+..+.--|.+-.+||+.|+-+-=++
T Consensus 153 ll~---~~~--sdltGsFrLykk~vl~~-li~-e~vSkGyvfqmEll~ra~~~~y~IgEvP 206 (238)
T KOG2978|consen 153 LLN---PGV--SDLTGSFRLYKKEVLEK-LIE-ESVSKGYVFQMELLARARQHGYTIGEVP 206 (238)
T ss_pred hcc---CCC--ccCcceeeeehHHHHHh-hHH-HhhccchhhhHHHHHhccccCceEeecc
Confidence 211 221 13444445889999886 111 1123446677999999999996554333
No 69
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.09 E-value=3e-06 Score=75.73 Aligned_cols=83 Identities=25% Similarity=0.353 Sum_probs=57.2
Q ss_pred cceeEEEEc-CCCCCCCCccccC--CceEEEEEecCCCCcCCCccEEEeeccce-eecccceeEEEeCCC-c--------
Q psy14856 645 PMSFVVRYR-PDEQPSLRPHHDS--STYTINIALNQVGVDYEGGGCRFIRYNCN-VTATRMGWMLMHPGR-L-------- 711 (734)
Q Consensus 645 ~~~fvvrY~-~~~~~~l~~H~D~--S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~-v~~~~~G~al~h~g~-l-------- 711 (734)
++.++.+|. +++...+++|.|. +.+|+++. .++||++|...... ...+.++..+++.|. |
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~~~~~Til~~-------~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~ 74 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDEDGLLTILFQ-------DEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRY 74 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES--SSEEEEEE-------TSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS
T ss_pred CEEEEEECCCcccCCceeCCCcCCCCeEEEEec-------ccchheeccccccccCccCccceeeeeceeeeecccCCcc
Confidence 457889999 6788889999999 99999997 38999999865422 123455677777776 2
Q ss_pred -ccccCcccCCceeEEEEEeeeCC
Q psy14856 712 -THYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 712 -th~H~g~~vT~G~Ryilv~F~~p 734 (734)
..+|++.++++|+|+.++.|+.|
T Consensus 75 ~~~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 75 PATLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp ----EEEE--STS-EEEEEEEEE-
T ss_pred CCceeeeEcCCCCCEEEEEEEECC
Confidence 15899999999999999999988
No 70
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=97.79 E-value=0.00019 Score=74.18 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=87.2
Q ss_pred EEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 293 VLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 293 V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
|+|++. .|.+..+++|+++|.++..|+..+. -|++ .....+-++|-|.|++
T Consensus 1 isiI~c-~n~~~~~~~~~~~i~~~~~~~~~~i-~i~~---------------------------~~~~~s~~~~yN~a~~ 51 (217)
T PF13712_consen 1 ISIIIC-VNDEELYEECLRSIKRLIGPPGELI-EIDN---------------------------VRNAKSMAAAYNEAME 51 (217)
T ss_dssp EEEEEE-ES-HHHHHHHHHHHHHTT--TEEEE-EEE----------------------------SSS-S-TTTHHHHHGG
T ss_pred CEEEEE-ECCHHHHHHHHHHHHhhCCCCceEE-EEec---------------------------cCCCcCHHHHHHHHHH
Confidence 344444 4556778889999999999986542 2322 1222345678899987
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHH---cCCce-eeecc-----cCCCccccc--ccccccCCccccchHH----
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESL-IAPLL-----VRPFKAWSN--FWGALNADGFYARSFD---- 437 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~I-VaP~l-----~~~~~~wsN--FWgal~~~GyY~Rsed---- 437 (734)
.| +++|++|+.-|+.+.+++.++.|++ +++.+ +..+. ...+..|.. ++|. ...|.|.-.
T Consensus 52 ~a---~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~~~~~g~---~~~~~~~~~~~~~ 125 (217)
T PF13712_consen 52 KA---KAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWESPNKVGK---VREYGRIMHGHGP 125 (217)
T ss_dssp G-----SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS---EEEEEE---TTEEEE----E--
T ss_pred hC---CCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCccccccccccc---ccccccccccccc
Confidence 75 6899999999999999999999986 33432 12232 222333321 1111 122222111
Q ss_pred --HHHH-HhcccCCcceeeeceeeeEEe-eehhhHhhcccccccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 438 --YMNI-INGDQGGKGIWNVPYITNCYL-MKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 438 --y~~i-~~~~~~~~G~~nVP~v~~~~L-I~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
..+. ....+ ....-+|=.|-.+.| ++++++ .|.. ..|. +.---|++||.++|++|..+++.+
T Consensus 126 ~~~~~~~~~~~~-~~~~~~V~avDg~ll~~~~dv~-~fde-~~~~-gfH~Ydvd~cl~~~~~G~~v~~~~ 191 (217)
T PF13712_consen 126 NSAGEVRYGGPR-NDPPEEVQAVDGLLLATQKDVP-RFDE-DLFT-GFHFYDVDQCLEARRAGYRVVVPP 191 (217)
T ss_dssp -----------E-S-SSEEEEEE-TTEEEEETTB-------SS---SSSSHHHHHHHHHHHTT-EEEE--
T ss_pred cccccccccccc-cCCceeEEEecceEEEEEcccC-CCCc-cccC-CcchHHHHHHHHHHHhCCEEEecC
Confidence 0000 10000 013346666666666 588887 2111 1122 223679999999999999997744
No 71
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=97.66 E-value=0.00016 Score=64.30 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=60.5
Q ss_pred cCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH----HHHHHHHHHhhh
Q psy14856 300 DKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS----KEARNLAVENSL 375 (734)
Q Consensus 300 ~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~----a~arN~al~~a~ 375 (734)
+|++++|++|+..-.++-+. ++.|+.++|+|.|.++++++ +.|+++........ ..+++..++.
T Consensus 1 rne~~~L~~wl~~~~~lG~d--~i~i~d~~s~D~t~~~l~~~--------~~v~i~~~~~~~~~~~~~~~~~~~~~~~-- 68 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVD--HIYIYDDGSTDGTREILRAL--------PGVGIIRWVDPYRDERRQRAWRNALIER-- 68 (97)
T ss_pred CChHHHHHHHHHHHHHcCCC--EEEEEECCCCccHHHHHHhC--------CCcEEEEeCCCccchHHHHHHHHHHHHh--
Confidence 68999999999999988764 46565556999999988764 34566554433221 2233332222
Q ss_pred hcCccEEEEECCCccCCChH---HHHHH
Q psy14856 376 HKGVDFYFYVDSDSHLDNPD---VLKYL 400 (734)
Q Consensus 376 ~~~~DYlf~vDAD~~L~np~---tL~~L 400 (734)
..+.||++++|+|-+|..|. +|+.+
T Consensus 69 ~~~~dWvl~~D~DEfl~~~~~~~~l~~~ 96 (97)
T PF13704_consen 69 AFDADWVLFLDADEFLVPPPGRRSLRDF 96 (97)
T ss_pred CCCCCEEEEEeeeEEEecCCCCCCHHHh
Confidence 14789999999999887444 56554
No 72
>KOG1591|consensus
Probab=97.61 E-value=0.00049 Score=73.85 Aligned_cols=84 Identities=23% Similarity=0.318 Sum_probs=67.2
Q ss_pred CCcceeEEEEcCCCCCCCCccccCCc----------------eEEEEEecCCCCcCCCccEEEeeccc--eeecccceeE
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHDSST----------------YTINIALNQVGVDYEGGGCRFIRYNC--NVTATRMGWM 704 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D~S~----------------~T~ni~Ln~~~~dfeGGg~~F~~~~~--~v~~~~~G~a 704 (734)
..+..-|++|..|+. ..+|+|-.. =|+.++|++ .=+||+|.|+..+- +| .|++|.|
T Consensus 174 ~~E~lqVlnYg~Gg~--Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~---v~~GG~TvFP~~~~~~~V-~PkkGda 247 (289)
T KOG1591|consen 174 NGESLQVLNYGLGGH--YEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSD---VEQGGETVFPNLGMKPAV-KPKKGDA 247 (289)
T ss_pred cCccceEEEecCCcc--ccccccccccccchhhhhcccCCcceeEEEEecc---cCCCCcccCCCCCCcccc-cCCCCCe
Confidence 366778999988875 888988431 467889999 56999999998776 55 4999999
Q ss_pred EEe-------CCCcccccCcccCCceeEEEEEeee
Q psy14856 705 LMH-------PGRLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 705 l~h-------~g~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
+.+ .+...-.|+|.||..|.|++...|+
T Consensus 248 l~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi 282 (289)
T KOG1591|consen 248 LFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWI 282 (289)
T ss_pred eEEEEccCCCCCCccccccCCCeeeccceeeeeee
Confidence 975 2333458999999999999998886
No 73
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=97.49 E-value=0.00064 Score=67.81 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=71.8
Q ss_pred cCccEEEEECCCccCCChHHHHHHHHc--C--Cceeeecc-cCCCcccccccccccCCccccchHHHHHHHhcccCCcce
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLVNR--N--ESLIAPLL-VRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGI 451 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI~~--n--k~IVaP~l-~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~ 451 (734)
+++||++++|||+.++ |+.|+.|+.. + ..+|.-+- ..+. .+||+.+..... .-....+....+ . .
T Consensus 30 a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~vglVt~~~~~~~~---~~~~~~l~~~~~-~~~~~~~~a~~~-~--~-- 99 (175)
T PF13506_consen 30 AKYDYLVISDSDIRVP-PDYLRELVAPLADPGVGLVTGLPRGVPA---RGFWSRLEAAFF-NFLPGVLQALGG-A--P-- 99 (175)
T ss_pred CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCCCcEEEecccccCC---cCHHHHHHHHHH-hHHHHHHHHhcC-C--C--
Confidence 6899999999999998 9999999973 2 33444322 1111 356665521111 000011111111 1 1
Q ss_pred eeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHcCeeEEEecc
Q psy14856 452 WNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNKGIHLKIDST 504 (734)
Q Consensus 452 ~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~ 504 (734)
-..++++++++++|++ .+. ..+ ...+.||..++..++++|+.+.+++.
T Consensus 100 ---~~~G~~m~~rr~~L~~-~GG~~~l-~~~ladD~~l~~~~~~~G~~v~~~~~ 148 (175)
T PF13506_consen 100 ---FAWGGSMAFRREALEE-IGGFEAL-ADYLADDYALGRRLRARGYRVVLSPY 148 (175)
T ss_pred ---ceecceeeeEHHHHHH-cccHHHH-hhhhhHHHHHHHHHHHCCCeEEEcch
Confidence 2335788999999998 432 222 24689999999999999999999873
No 74
>KOG3736|consensus
Probab=97.25 E-value=0.00041 Score=80.36 Aligned_cols=212 Identities=13% Similarity=0.189 Sum_probs=137.1
Q ss_pred CCCCcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEE-EEecCCCC-c-HHHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856 288 DQFPSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISM-FVYNNQEY-H-APLFDDYIHNFKTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l-~I~ns~D~-t-~~il~~f~~~~~~~y~~V~ii~~~~~~g~ 363 (734)
+..|+++|+|..+|| ...|-+.+.|+.+..=+..-.+| ++++++|. + .+.+++++++.. .|+++..+++.|.
T Consensus 139 ~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~----~v~i~r~~~R~GL 214 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFS----KVRILRTKKREGL 214 (578)
T ss_pred cccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhc----ceeEEeecchhhh
Confidence 357999999999999 45667788888877666554554 44443322 2 444666666554 3999999999999
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH----cCCceeeecccCCC-------cccccccccccCCccc
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN----RNESLIAPLLVRPF-------KAWSNFWGALNADGFY 432 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~----~nk~IVaP~l~~~~-------~~wsNFWgal~~~GyY 432 (734)
..||..|...| .+|-+.|+||-+..+ ..+|+-|++ ..+.|++|++.... +.+.+-+|+.+=+..|
T Consensus 215 IrARl~GA~~A---~geVL~FLDsHcE~n-~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f 290 (578)
T KOG3736|consen 215 IRARLLGASMA---TGEVLTFLDSHCEVN-VGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTF 290 (578)
T ss_pred HHHHhhhhhhh---hchheeeeecceeEe-cCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeecceeE
Confidence 99999998775 699999999999996 888888886 47889999885311 1122222322212222
Q ss_pred cchHHHHHH--HhcccCCcceeeeceeee-EEeeehhhHhhcccccccccC---CCchhHHHHHHHHHcCeeEEEecccc
Q psy14856 433 ARSFDYMNI--INGDQGGKGIWNVPYITN-CYLMKTSVIKATNIKTIYTLN---SMDYDMAFCTNLRNKGIHLKIDSTQE 506 (734)
Q Consensus 433 ~Rsedy~~i--~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~~~~f~~~---~~deDm~Fc~~ar~~Gi~myv~N~~~ 506 (734)
.- ..++. .++......-...|.+.+ .+-|+|..+.. .++ |+.+ -=+|-+.|..++=.=|=.|.+.+=..
T Consensus 291 ~w--~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~e-iG~--yD~gMdiwGGENlElSfrvWqCGG~lei~PCSr 365 (578)
T KOG3736|consen 291 KW--ERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGE-LGS--YDEGMDIWGGENLELSFRVWQCGGRLEIVPCSR 365 (578)
T ss_pred Ee--ccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhh-ccC--ccccccccChhhceeeEEEeccCCeEEecCccc
Confidence 20 12221 111110023344566655 56699999887 433 3321 12355566666667788888888899
Q ss_pred eEEeec
Q psy14856 507 YGHLVD 512 (734)
Q Consensus 507 ~G~l~~ 512 (734)
.||+.-
T Consensus 366 VGHifR 371 (578)
T KOG3736|consen 366 VGHIFR 371 (578)
T ss_pred eeeeee
Confidence 999965
No 75
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.20 E-value=0.00088 Score=65.32 Aligned_cols=80 Identities=25% Similarity=0.378 Sum_probs=63.2
Q ss_pred eeEEEEcCCCCCCCCccccC---Cc--eEEEEEecCCCCcCCCccEEEeecc------ceeecccceeEEEeCC------
Q psy14856 647 SFVVRYRPDEQPSLRPHHDS---ST--YTINIALNQVGVDYEGGGCRFIRYN------CNVTATRMGWMLMHPG------ 709 (734)
Q Consensus 647 ~fvvrY~~~~~~~l~~H~D~---S~--~T~ni~Ln~~~~dfeGGg~~F~~~~------~~v~~~~~G~al~h~g------ 709 (734)
..+.||.++.- -+.|.|- -- +-+-|.||++|+||+||+-...+++ ..|..++.|.|+||+-
T Consensus 64 plllrY~~gdy--n~LHqdlyGe~vFPlQvv~lLs~Pg~DftGGEFVltEQrPR~QSR~~V~~L~qGda~if~t~~RPv~ 141 (173)
T PF09859_consen 64 PLLLRYGPGDY--NCLHQDLYGEHVFPLQVVILLSEPGEDFTGGEFVLTEQRPRMQSRAMVLPLRQGDALIFATNHRPVR 141 (173)
T ss_pred hhhheeCCCCc--cccccCCCCCcccCeEEEEEcCCCCCcccCceEEEEEecCCccCccccCCcCCCCEEEEecCCCCcC
Confidence 46789987775 5668883 22 4466779999999999999997654 4577899999999974
Q ss_pred ------CcccccCcccCCceeEEEE
Q psy14856 710 ------RLTHYHEGLQVTQGTRYIM 728 (734)
Q Consensus 710 ------~lth~H~g~~vT~G~Ryil 728 (734)
|.+.+|+.-+|.+|+||-|
T Consensus 142 G~rG~yRv~~RHgVS~vrsG~R~tL 166 (173)
T PF09859_consen 142 GARGYYRVNMRHGVSRVRSGERHTL 166 (173)
T ss_pred CCccceecccccccccccccceEEE
Confidence 3455899999999999977
No 76
>KOG2547|consensus
Probab=97.18 E-value=0.002 Score=70.12 Aligned_cols=194 Identities=13% Similarity=0.168 Sum_probs=122.9
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEe-cCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc-HHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVY-NNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN-SKE 365 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~-ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g-~a~ 365 (734)
..+|.|+|+-|+--..+.+-.=+++-...+||+.++ ||+. +++|--.+.++..++++++. ..|++-..+..| ..+
T Consensus 82 ~~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~~El-Lfcv~s~eDpAi~vv~~Ll~kyp~V--dAklf~gG~~vg~npK 158 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVDPNLYHNLESFFTSQYHKYEL-LFCVESSEDPAIEVVERLLKKYPNV--DAKLFFGGEKVGLNPK 158 (431)
T ss_pred CCCCCceEEeecccCCchhHHhHHHHHhhccCceEE-EEEEccCCCcHHHHHHHHHhhCCCc--ceEEEEcccccccChh
Confidence 368999999999888888888888888999998776 4555 58899999999999988754 344444444444 245
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCC--ceeeecccCCCccccccccc----cc------CCcccc
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNE--SLIAPLLVRPFKAWSNFWGA----LN------ADGFYA 433 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk--~IVaP~l~~~~~~wsNFWga----l~------~~GyY~ 433 (734)
..|+-..+ +.++.||+++.|+++.+. ||||-.|..+-- .-.| +++ +..++.=|++ +. ..+.+-
T Consensus 159 InN~mpgy-~~a~ydlvlisDsgI~m~-pdtildm~t~M~shekma-lvt--q~py~~dr~Gf~atle~~~fgTsh~r~y 233 (431)
T KOG2547|consen 159 INNMMPGY-RAAKYDLVLISDSGIFMK-PDTILDMATTMMSHEKMA-LVT--QTPYCKDRQGFDATLEQVYFGTSHPRIY 233 (431)
T ss_pred hhccCHHH-HHhcCCEEEEecCCeeec-CchHHHHHHhhhccccee-eec--CCceeeccccchhhhhheeeccCCceEE
Confidence 66664432 336799999999999998 999999886421 1111 221 1112222221 10 000000
Q ss_pred chHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 434 RSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 434 Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
-+.+.+...- . .|.|+ ++||++|.. .+. ..| .+-+-||.-|+++.-..|+..-+.+
T Consensus 234 l~~n~~~~~c--~--tgms~--------~mrK~~ld~-~ggi~~f-~~yLaedyFaaksllSRG~ksaist 290 (431)
T KOG2547|consen 234 LSGNVLGFNC--S--TGMSS--------MMRKEALDE-CGGISAF-GGYLAEDYFAAKSLLSRGWKSAIST 290 (431)
T ss_pred Eccccccccc--c--ccHHH--------HHHHHHHHH-hccHHHH-HHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 0111111110 1 23332 788888887 332 223 3557899999999999888877766
No 77
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=97.09 E-value=0.0019 Score=64.21 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=67.2
Q ss_pred EEEEECCCccCCChHHHHHHHHc----CCceeee-cccCCCcccccccccccCCccccchHHHHH-HHhcccCCcceeee
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR----NESLIAP-LLVRPFKAWSNFWGALNADGFYARSFDYMN-IINGDQGGKGIWNV 454 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~----nk~IVaP-~l~~~~~~wsNFWgal~~~GyY~Rsedy~~-i~~~~~~~~G~~nV 454 (734)
|++++|||+.+. |++|+++++. +..++.+ +...+. .+++..+.. -.| ..+... +..+.. .|. ..
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~~~~vq~~~~~~~~---~~~~~~~~~-~~~--~~~~~~~~~~~~~--~~~-~~ 70 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPKVDAVQGPIIFRNR---GSLLTRLQD-FEY--AISHGLSRLSQSS--LGR-PL 70 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCCceEEEccEEecCC---CChhheeeh-hhh--hhhhhhhHHHHHh--cCC-Cc
Confidence 789999999998 9999999862 3344433 332211 222211111 111 111111 111111 221 22
Q ss_pred ceeeeEEeeehhhHhhcccccccc-cCCCchhHHHHHHHHHcCeeEEEeccc
Q psy14856 455 PYITNCYLMKTSVIKATNIKTIYT-LNSMDYDMAFCTNLRNKGIHLKIDSTQ 505 (734)
Q Consensus 455 P~v~~~~LI~~~vL~~~~~~~~f~-~~~~deDm~Fc~~ar~~Gi~myv~N~~ 505 (734)
+..+++.+++++++++ .+ .|+ .....||+++|.+++++|+.....+..
T Consensus 71 ~~~G~~~~~r~~~l~~-vg--~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~ 119 (193)
T PF13632_consen 71 FLSGSGMLFRREALRE-VG--GFDDPFSIGEDMDLGFRLRRAGYRIVYVPDA 119 (193)
T ss_pred cccCcceeeeHHHHHH-hC--cccccccccchHHHHHHHHHCCCEEEEeccc
Confidence 3446778999999998 43 344 566889999999999999999777755
No 78
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.08 E-value=0.017 Score=66.85 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=43.1
Q ss_pred CCcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEec--------CCCCcHHHHHHHHH
Q psy14856 290 FPSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYN--------NQEYHAPLFDDYIH 343 (734)
Q Consensus 290 ~P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~n--------s~D~t~~il~~f~~ 343 (734)
.+.+...||+||| +.-|...|+||..++||+.+=-|||.+ ++--|.+++-+.+.
T Consensus 24 ~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~ 86 (527)
T PF03142_consen 24 DKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILG 86 (527)
T ss_pred CceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhc
Confidence 4568889999999 889999999999999998776566653 45556777777665
No 79
>KOG2977|consensus
Probab=97.06 E-value=0.0021 Score=67.83 Aligned_cols=94 Identities=11% Similarity=0.107 Sum_probs=74.2
Q ss_pred cEEEEEEecCChhHH----HHHHHHHHc--ccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856 292 SVLISVFIDKPTAFL----EEFLNKIAN--LNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L----~~fL~sL~~--LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~ 363 (734)
-.+|+||+||++.-| .++++.|++ +.=|..+.++.|.+ |+|.|.++.-+|-.+++ +..++++.-.+|+|+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~--~d~irV~~l~~nrgK 145 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLG--DDNIRVIKLKKNRGK 145 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcC--cceEEEeehhccCCC
Confidence 589999999997654 566677764 33334666665554 99999999999987766 458999999999999
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCcc
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSH 390 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~ 390 (734)
+.|-.+++-.+ .|+|++|.|||--
T Consensus 146 GgAvR~g~l~~---rG~~ilfadAdGa 169 (323)
T KOG2977|consen 146 GGAVRKGMLSS---RGQKILFADADGA 169 (323)
T ss_pred CcceehhhHhc---cCceEEEEcCCCC
Confidence 88877888664 6999999999964
No 80
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=96.78 E-value=0.011 Score=64.89 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=64.8
Q ss_pred EEEEEEecCChhHHHHHHHHHHccc--CCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC----CCc----
Q psy14856 293 VLISVFIDKPTAFLEEFLNKIANLN--YPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS----TVN---- 362 (734)
Q Consensus 293 V~I~I~i~n~~~~L~~fL~sL~~Ld--YPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~----~~g---- 362 (734)
+.|+|+++|....+.++|++|+++. +.+.+|.|+.+.+.+.+.+.++.+. ..|+++.... +.+
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~-------~~i~~i~~~~~~~~~~~~~~~ 74 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG-------DGVTHIQHPPISIKNVNPPHK 74 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc-------cccEEEEcccccccccCcccc
Confidence 4689999999999999999999984 4445554444444444555555542 1344443321 111
Q ss_pred ------HHH----HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 363 ------SKE----ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 363 ------~a~----arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
.+. |.|.+++. .++++++++|.|+.+. |+.++.+-
T Consensus 75 ~~~y~~ia~hyk~aln~vF~~---~~~~~vIILEDDl~~s-PdFf~yf~ 119 (334)
T cd02514 75 FQGYYRIARHYKWALTQTFNL---FGYSFVIILEDDLDIA-PDFFSYFQ 119 (334)
T ss_pred cchhhHHHHHHHHHHHHHHHh---cCCCEEEEECCCCccC-HhHHHHHH
Confidence 133 66666654 3699999999999998 99775544
No 81
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=96.71 E-value=0.05 Score=63.12 Aligned_cols=207 Identities=12% Similarity=0.201 Sum_probs=121.6
Q ss_pred CCCcEEEEEEecCC-hhHHHHHHHHHHccc-CCCceEEEEEe---cCCCC-cHHHHHHHHHHhccCc--ceEEEEeCC-C
Q psy14856 289 QFPSVLISVFIDKP-TAFLEEFLNKIANLN-YPAKKISMFVY---NNQEY-HAPLFDDYIHNFKTMF--KNVKYIAHN-S 359 (734)
Q Consensus 289 ~~P~V~I~I~i~n~-~~~L~~fL~sL~~Ld-YPk~ri~l~I~---ns~D~-t~~il~~f~~~~~~~y--~~V~ii~~~-~ 359 (734)
+..+|-|+||+-+. ...+..||+..+++= =++++..|.|. +..|. ....+++.+++....| ..++++... .
T Consensus 245 ~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~~~ 324 (499)
T PF05679_consen 245 ESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVKTG 324 (499)
T ss_pred CCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEecCC
Confidence 34789999999988 999999999999862 23555554333 32222 2222444555544444 367788776 6
Q ss_pred CCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceeeecccCCCcccccccccccCCccccchH
Q psy14856 360 TVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIAPLLVRPFKAWSNFWGALNADGFYARSF 436 (734)
Q Consensus 360 ~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rse 436 (734)
+-+.++|.+.|++.. ..-+.+||+|.|..++ ++.|...-. .++.+=.|++-+. |=+.+...+ .-+..
T Consensus 325 ~fsr~~~Ld~g~~~~--~~d~L~f~~Dvd~~f~-~~fL~rcR~nti~g~qvy~PI~Fs~------y~p~~~~~~-~~~~~ 394 (499)
T PF05679_consen 325 EFSRGAALDVGAKKF--PPDSLLFFCDVDMVFT-SDFLNRCRMNTIPGKQVYFPIVFSQ------YNPDIVYAG-KPPEP 394 (499)
T ss_pred CccHHHHHHhhcccC--CCCcEEEEEeCCcccC-HHHHHHHHHhhhcCcEEEEeeeccc------cCCcccccC-CCCcc
Confidence 677788888888744 4578999999999998 999987654 5889999988421 001110000 00001
Q ss_pred HHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHcC--eeEEEecccceEE
Q psy14856 437 DYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNKG--IHLKIDSTQEYGH 509 (734)
Q Consensus 437 dy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~G--i~myv~N~~~~G~ 509 (734)
+-.++- +. .|-|..=.-+.+-+-+.+.++.+++. ..+..+.-.||.++....-++| +.++=......=|
T Consensus 395 ~~~~i~--~~--~G~w~~~gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L~h 466 (499)
T PF05679_consen 395 DQFDIS--KD--TGFWRRFGFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGLVH 466 (499)
T ss_pred ccCccC--CC--CCccccCCCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCeEE
Confidence 111111 11 34443322222233455555441111 3333456689999999999988 6655444333333
No 82
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=96.67 E-value=0.015 Score=61.01 Aligned_cols=187 Identities=12% Similarity=0.133 Sum_probs=104.2
Q ss_pred CcEEEEEEecCCh--h-HHHHHHHHH--HcccCCCceEEEEEe-cCCCCcHHHHHHHHHHhccCcceEEEEe---CCCCC
Q psy14856 291 PSVLISVFIDKPT--A-FLEEFLNKI--ANLNYPAKKISMFVY-NNQEYHAPLFDDYIHNFKTMFKNVKYIA---HNSTV 361 (734)
Q Consensus 291 P~V~I~I~i~n~~--~-~L~~fL~sL--~~LdYPk~ri~l~I~-ns~D~t~~il~~f~~~~~~~y~~V~ii~---~~~~~ 361 (734)
|..+.+||+-..+ | .-.+.+.++ .+-=-|++-+.+++. +++ --...+++++... +.|-++. ++.=.
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~-~~d~~i~~~i~~~----~~~~yl~~~s~~~F~ 76 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHE-VMDRLIRSYIDPM----PRVLYLDFGSPEPFA 76 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecch-hHHHHHHHHhccc----cceEEEecCCCcccc
Confidence 4566777774321 1 122333322 233345555654444 322 1125566666544 3444443 33234
Q ss_pred cHHHHHHHHHHhhhh-cCccEEEEECCCccCCChHHHHHH----HHcCC-----ceeeeccc--CCC-----cccccccc
Q psy14856 362 NSKEARNLAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYL----VNRNE-----SLIAPLLV--RPF-----KAWSNFWG 424 (734)
Q Consensus 362 g~a~arN~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~L----I~~nk-----~IVaP~l~--~~~-----~~wsNFWg 424 (734)
.++.++|.|..++-+ -.+++++|+|+||.+.-.+..+.| |..-+ .+|-|+.- +.. .+-+-||.
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~f~~~d~f~d 156 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVFFDVEDMFLD 156 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHHHHHHHHhhh
Confidence 568999999998854 578999999999999856677777 44333 34444441 100 11223454
Q ss_pred cccCCccccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHH
Q psy14856 425 ALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRN 494 (734)
Q Consensus 425 al~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~ 494 (734)
++.. +-.+.+.++ .--+=.|.+++.+||++..+-..++- ..|- +--.||..|-.|+-.
T Consensus 157 ~~i~---------es~~~~~~~--~~~ff~~~~T~~~liN~~~F~~tgGydE~F~-GhG~EDfe~~~R~~l 215 (346)
T COG4092 157 AMIF---------ESPLAEFRK--EDNFFIAPYTNIFLINRRMFSLTGGYDERFR-GHGSEDFEFLTRLGL 215 (346)
T ss_pred hHhh---------hhHHHHhCc--ccccccccccceEEEehhHHHHhcCCccccc-cCCchhHHHHHHHHH
Confidence 4421 112233233 34456788899999988887653443 5554 334688888877754
No 83
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=96.52 E-value=0.048 Score=55.85 Aligned_cols=82 Identities=18% Similarity=0.174 Sum_probs=59.4
Q ss_pred CCcceeEEEEcCCCCCCCCcccc-CCceEEEEEecCCCCcCCCccEEEeeccc--------------------eeecccc
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHD-SSTYTINIALNQVGVDYEGGGCRFIRYNC--------------------NVTATRM 701 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D-~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~--------------------~v~~~~~ 701 (734)
....+.++++.+++. -..|.- +|-+|-..+|.-++ .+|.+.|...+. ...+|+.
T Consensus 94 ~i~~~W~ni~~~Gg~--h~~H~Hp~~~lSgvyYl~~p~---~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~~ 168 (201)
T TIGR02466 94 RIQKAWVNILPQGGT--HSPHLHPGSVISGTYYVQTPE---NCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQE 168 (201)
T ss_pred EEeeEeEEEcCCCCc--cCceECCCceEEEEEEEeCCC---CCCceeEecCcchhhhccccccCccccccCccEEECCCC
Confidence 455789999987764 444544 67899999998754 578888854321 1246899
Q ss_pred eeEEEeCCCcccccCcccCCceeEEEEEee
Q psy14856 702 GWMLMHPGRLTHYHEGLQVTQGTRYIMISF 731 (734)
Q Consensus 702 G~al~h~g~lth~H~g~~vT~G~Ryilv~F 731 (734)
|..||||+.| +|+..|-.+...-|-|+|
T Consensus 169 G~lvlFPS~L--~H~v~p~~~~~~RISiSF 196 (201)
T TIGR02466 169 GRVLLFESWL--RHEVPPNESEEERISVSF 196 (201)
T ss_pred CeEEEECCCC--ceecCCCCCCCCEEEEEE
Confidence 9999999998 899999876544455555
No 84
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=95.99 E-value=0.015 Score=58.06 Aligned_cols=72 Identities=22% Similarity=0.400 Sum_probs=62.4
Q ss_pred CCCCCccccC----CceEEEEEecCCCCcCCCccEEEee-----ccceeecccceeEEEeCCCcccccCcccCCc-----
Q psy14856 657 QPSLRPHHDS----STYTINIALNQVGVDYEGGGCRFIR-----YNCNVTATRMGWMLMHPGRLTHYHEGLQVTQ----- 722 (734)
Q Consensus 657 ~~~l~~H~D~----S~~T~ni~Ln~~~~dfeGGg~~F~~-----~~~~v~~~~~G~al~h~g~lth~H~g~~vT~----- 722 (734)
......|+|. ..+++.+.|.. | ||+||-..+++ .++.+. +..|..|++.|+. .+|+..||++
T Consensus 84 nr~t~~HrD~~~~~~~~~~~~t~~~-g-d~~~g~l~lp~~~~~~~g~~~~-~~~GtVl~~~~~~-~~Hgvtpv~~~~~~~ 159 (171)
T PF12851_consen 84 NRCTHSHRDTHNMPNGYDVLCTLGR-G-DYDGGRLELPGLDPNILGVAFA-YQPGTVLIFCAKR-ELHGVTPVESPNRNH 159 (171)
T ss_pred ecCccceecCCCCCCCeEEEEecCC-c-cccCceEeccccccccCCEEEe-cCCCcEEEEcccc-eeeecCcccCCCCCC
Confidence 3456779997 67899999987 1 69999999999 888876 8999999999995 6999999998
Q ss_pred eeEEEEEeee
Q psy14856 723 GTRYIMISFV 732 (734)
Q Consensus 723 G~Ryilv~F~ 732 (734)
|+|+-||.|.
T Consensus 160 ~~R~slvfy~ 169 (171)
T PF12851_consen 160 GTRISLVFYQ 169 (171)
T ss_pred CeEEEEEEEe
Confidence 9999999884
No 85
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=95.97 E-value=0.065 Score=55.50 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=93.0
Q ss_pred cEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 292 SVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
+|.|+||-|+.+.-|..||..|.. |.=.+.+..|||.+.++.. .-..+.+.|.|
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~~~~i~vi~Q~~~~-------------------------~FNR~~llNvG 57 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQVGNF-------------------------RFNRAKLLNVG 57 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcCCcEEEEEEEecCCc-------------------------cchhhhhhhHH
Confidence 699999999999888888877653 2222344445555422221 12346788888
Q ss_pred HHhhhh-cCccEEEEECCCccCCChHHHHHHHHcCCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCc
Q psy14856 371 VENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGK 449 (734)
Q Consensus 371 l~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~ 449 (734)
...|++ ..+|+++|-|.|.+..|+..+ .-..+...-+++.++. -+|...++.
T Consensus 58 ~~~a~k~~~~dc~i~hDVDllP~~~~~~-y~~~~~p~H~s~~~~~--------------~~~~lpy~~------------ 110 (219)
T cd00899 58 FLEALKDGDWDCFIFHDVDLLPENDRNL-YGCEEGPRHLSVPLDK--------------FHYKLPYKT------------ 110 (219)
T ss_pred HHHHhhcCCccEEEEecccccccCcccc-ccCCCCCeEEEEeecc--------------cccccCccc------------
Confidence 888877 458999999999999855433 2222333333333311 011111111
Q ss_pred ceeeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 450 GIWNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 450 G~~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
+++++..+.++-+.+-++- ..|..+ =.||-+|+.|+..+|+.+.--.
T Consensus 111 ------~~Gg~~~~~k~~f~~VNGf~n~f~GW-GgEDdd~~~Rl~~~g~~~~r~~ 158 (219)
T cd00899 111 ------YFGGVLALTREQFRKVNGFSNAYWGW-GGEDDDLYNRIKAAGLKITRPS 158 (219)
T ss_pred ------ccccceeeEHHHHHHhCCcCCcCccC-CcchHHHHHHHHHCCCeEEecc
Confidence 1235667888888771221 444432 2589999999999999875544
No 86
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=95.94 E-value=0.11 Score=55.78 Aligned_cols=157 Identities=13% Similarity=0.108 Sum_probs=86.1
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCCCCCccc-CCCcccccccCeeeeccchHHHHHHHHH-HhhchhhhhhhcCCC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRL-ETGYEAVPTRDIHMKQVGLAGVWAEFLR-KYVVPLQEREFIGYH 638 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~-~g~~~~vpt~di~~~~~g~~~~~~~~l~-~~v~P~~~~~f~~~~ 638 (734)
|....+|+++.|++|.++++..-............ .++-.... -.++.....+.+.+++. ..|..+++.+++..
T Consensus 31 vvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~~l~~~p~l~~~~~~LlG~~- 106 (277)
T TIGR02408 31 LLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVR---SIFEVHVLSPILARLVRDPRVANAARQILGSD- 106 (277)
T ss_pred EECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceE---EEecccccCHHHHHHHcChHHHHHHHHHcCCC-
Confidence 56678999999999999999874311110000000 00000000 01111123444555442 36666667666532
Q ss_pred CCCCCCcceeEEEEcCC-CCCCCCccccCC------------ceEEEEEecCCCCcCCCccEEEee----c--cce----
Q psy14856 639 HEPVRAPMSFVVRYRPD-EQPSLRPHHDSS------------TYTINIALNQVGVDYEGGGCRFIR----Y--NCN---- 695 (734)
Q Consensus 639 ~~~l~~~~~fvvrY~~~-~~~~l~~H~D~S------------~~T~ni~Ln~~~~dfeGGg~~F~~----~--~~~---- 695 (734)
.......++. +|+ ....+.+|.|.+ .+|+-|+|.+. +=+-|++.|.. . .|.
T Consensus 107 --~~l~~~~l~~--kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~--t~eNG~l~vIPGSH~~~~~~~~~~~ 180 (277)
T TIGR02408 107 --VYVHQSRINM--KPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDN--NETNGPLMLVPGSHRTFISCVGETP 180 (277)
T ss_pred --eEEEeeeeee--cCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccC--CCCCCCEEEecCCCCCcccCCcccc
Confidence 1112222333 344 344678899843 37889999985 34568888832 1 110
Q ss_pred -------------------------------eecccceeEEEeCCCcccccCcccCC-ceeEEEEE
Q psy14856 696 -------------------------------VTATRMGWMLMHPGRLTHYHEGLQVT-QGTRYIMI 729 (734)
Q Consensus 696 -------------------------------v~~~~~G~al~h~g~lth~H~g~~vT-~G~Ryilv 729 (734)
...-++|.+++|.+.+ +|++-+-+ ...|.++.
T Consensus 181 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~~~~--~H~S~~N~s~~~R~~l~ 244 (277)
T TIGR02408 181 RDNYKQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFDCNT--MHGSGSNITPWPRSNVF 244 (277)
T ss_pred chhhhhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEcccc--ccCCCCCCCCCcceeEE
Confidence 0124789999999996 89998855 44555543
No 87
>KOG3738|consensus
Probab=95.78 E-value=0.05 Score=59.93 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=124.8
Q ss_pred CCCcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEE-EEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 289 QFPSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISM-FVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
++|.-+|+|--+||+ ..|-+.+.|+++..=+..-.+| +|++ |+|-. ...... ..+.|+++.+.++.|...
T Consensus 122 dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe--d~~~L~-----ri~kvr~LRN~~ReGLir 194 (559)
T KOG3738|consen 122 DLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE--DGKLLK-----RIPKVRVLRNNEREGLIR 194 (559)
T ss_pred CCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH--HHHHHh-----hhheeeeecccchhhhhh
Confidence 467789999999995 5678899999987766543343 4444 66543 222221 135899999999999999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCcccccc--cccc--cCCccccc---
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFKAWSNF--WGAL--NADGFYAR--- 434 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~~wsNF--Wgal--~~~GyY~R--- 434 (734)
.|+.|.+.| .+.++.|+||-+-.+ .++|+-|++. -..+|+|++.--. -.|| -+|- -..||=|-
T Consensus 195 SRvrGAdvA---~a~vltFLDSHcEvN-~~WLePLL~Rvaed~trvVsPiiDvIn--~dnf~Y~~asadLrGGFDWsLhF 268 (559)
T KOG3738|consen 195 SRVRGADVA---QATVLTFLDSHCEVN-EGWLEPLLERVAEDTTRVVSPIIDVIN--LDNFSYVGASADLRGGFDWSLHF 268 (559)
T ss_pred hhccccccc---cceEEEEEecceeec-chhhHHHHHHHhhcccceeeccccccc--ccccccccchhhhcCCcceEEEE
Confidence 999999886 589999999999995 9999999863 4579999884211 1222 1221 12243221
Q ss_pred hHHHHHHHhccc--CCcceeeeceee-eEEeeehhhHhhcccccccccCCCchhHHH--------HHHHHHcCeeEEEec
Q psy14856 435 SFDYMNIINGDQ--GGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNSMDYDMAF--------CTNLRNKGIHLKIDS 503 (734)
Q Consensus 435 sedy~~i~~~~~--~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~~deDm~F--------c~~ar~~Gi~myv~N 503 (734)
-++++..-+++. ...--..-|.+. +.+.|+++-+.. .+.+|.||.. ++++=.-|=.+-+..
T Consensus 269 ~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~--------LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvP 340 (559)
T KOG3738|consen 269 KWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNE--------LGKYDMDMDIWGGENLELSFRVWQCGGSLEIVP 340 (559)
T ss_pred EehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHH--------hcccCccccccCCcceEEEEEEEeeCCeeEEEe
Confidence 123333333222 001112335554 477789888877 2334555543 333333344555556
Q ss_pred ccceEEee
Q psy14856 504 TQEYGHLV 511 (734)
Q Consensus 504 ~~~~G~l~ 511 (734)
=...||+.
T Consensus 341 CSRVGHVF 348 (559)
T KOG3738|consen 341 CSRVGHVF 348 (559)
T ss_pred ccchhhhh
Confidence 66677764
No 88
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=95.75 E-value=0.015 Score=49.19 Aligned_cols=47 Identities=28% Similarity=0.301 Sum_probs=35.4
Q ss_pred CcceeEEEEcCCCCCCCCccccCC--------ceEEEEEec-CCCCcCCCccEEEeec
Q psy14856 644 APMSFVVRYRPDEQPSLRPHHDSS--------TYTINIALN-QVGVDYEGGGCRFIRY 692 (734)
Q Consensus 644 ~~~~fvvrY~~~~~~~l~~H~D~S--------~~T~ni~Ln-~~~~dfeGGg~~F~~~ 692 (734)
.+....++|..++ .+.+|.|.. .+|+.|+|| +.+.||+||.+.|...
T Consensus 10 ~~~~~~~~~~~g~--~~~~H~D~~~~~~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGD--FFGWHVDADPSSSGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCC--EeeeeEcCCccccccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 3445566676665 599999953 389999999 4445999999999754
No 89
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.71 E-value=0.02 Score=56.73 Aligned_cols=85 Identities=24% Similarity=0.402 Sum_probs=63.9
Q ss_pred eeEEEEcCCCCCCCCcccc---CCceE--EEEEecCCCCcCCCccEEEeecc------ceeecccceeEEEeC-------
Q psy14856 647 SFVVRYRPDEQPSLRPHHD---SSTYT--INIALNQVGVDYEGGGCRFIRYN------CNVTATRMGWMLMHP------- 708 (734)
Q Consensus 647 ~fvvrY~~~~~~~l~~H~D---~S~~T--~ni~Ln~~~~dfeGGg~~F~~~~------~~v~~~~~G~al~h~------- 708 (734)
..+.+|.|+.-. +.|.| .-.|. +-|.|++||.||+||+-...+++ ..+.+.++|.+++|.
T Consensus 126 pLlLqYgpgD~N--cLHQDLYGelvFPLQvailLsePg~DfTGGEF~lvEQRPR~QSr~~vvpLrqG~g~vFavr~RPv~ 203 (236)
T COG3826 126 PLLLQYGPGDYN--CLHQDLYGELVFPLQVAILLSEPGTDFTGGEFVLVEQRPRMQSRPTVVPLRQGDGVVFAVRDRPVQ 203 (236)
T ss_pred ceeEEecCCccc--hhhhhhhhceeeeeeEEEeccCCCCcccCceEEEEecccccccCCceeeccCCceEEEEeecCccc
Confidence 578999998864 44888 33355 45567899999999998886653 457778999999984
Q ss_pred -----CCcccccCcccCCceeEEEE-EeeeC
Q psy14856 709 -----GRLTHYHEGLQVTQGTRYIM-ISFVD 733 (734)
Q Consensus 709 -----g~lth~H~g~~vT~G~Ryil-v~F~~ 733 (734)
.+.+.+|+...+.||.||.+ |.|=|
T Consensus 204 gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHD 234 (236)
T COG3826 204 GTRGWYRVPLRHGVSRLRSGERHTVGIIFHD 234 (236)
T ss_pred CccCccccchhcchhhhhcccceeeEEEeec
Confidence 24456899999999999976 44433
No 90
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=95.39 E-value=0.11 Score=51.39 Aligned_cols=157 Identities=13% Similarity=0.108 Sum_probs=80.0
Q ss_pred eecCCCCChHHHHHHHHHHHHh--CCCCCCCCCCcccCCCcccccccCeee-eccchHHHHHHHHHH-hhchhhhhhhcC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAY--GQWSDGTNNDKRLETGYEAVPTRDIHM-KQVGLAGVWAEFLRK-YVVPLQEREFIG 636 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~--g~ws~~~~~~~r~~g~~~~vpt~di~~-~~~g~~~~~~~~l~~-~v~P~~~~~f~~ 636 (734)
|....+|+++.|++|.++++.. .....+... ...............+ .. ...+..++.. .+..+++.++..
T Consensus 7 vvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~ 81 (211)
T PF05721_consen 7 VVIRNVLSPEEVERLREELDRLDDRALEPDQDV--SDFFDESFFGDYTEQLAKS---PNFYDLFLHPPRILDLVRALLGS 81 (211)
T ss_dssp EEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSC--EEEESTSCCCTCCCCGCCC---HHHHHHHHTHHHHHHHHHHHHTS
T ss_pred EEECCcCCHHHHHHHHHHHHHHHhhhhcccccc--ccccccccccccccccccc---hhhHHHHhhHHHHHHHHHHhhCC
Confidence 5567899999999999999986 222222211 1000000111111111 11 2233444444 666667766653
Q ss_pred CCCCCCCCcceeEEEEc-CCCCCC-CCccccC---------CceEEEEEecCCCCcCCCccEEEee----c---------
Q psy14856 637 YHHEPVRAPMSFVVRYR-PDEQPS-LRPHHDS---------STYTINIALNQVGVDYEGGGCRFIR----Y--------- 692 (734)
Q Consensus 637 ~~~~~l~~~~~fvvrY~-~~~~~~-l~~H~D~---------S~~T~ni~Ln~~~~dfeGGg~~F~~----~--------- 692 (734)
-..........+..-+. |+.... ..+|.|. ..+|+-|+|.+.. =+.|++.+.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~~~~~~~~~~wi~L~d~~--~~~G~~~v~pGSH~~~~~~~~~~~ 159 (211)
T PF05721_consen 82 DVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHTDPPENQLTVWIALDDIT--PENGPLEVVPGSHKWGVEPHEERF 159 (211)
T ss_dssp SEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTEESSSCEEEEEEESS-BB--TTCTCEEEETTGCCSCCEEECCCC
T ss_pred cchhhhhhHHHHHhhhhccccCCCCCCCCCCCcccccCCccceEEEEEeeccCC--cccCceEeecCCcCCCcccccccc
Confidence 21100001111100222 332333 5899992 2378999999853 4677788731 0
Q ss_pred ------------------cceeecccceeEEEeCCCcccccCccc-CCceeEE
Q psy14856 693 ------------------NCNVTATRMGWMLMHPGRLTHYHEGLQ-VTQGTRY 726 (734)
Q Consensus 693 ------------------~~~v~~~~~G~al~h~g~lth~H~g~~-vT~G~Ry 726 (734)
.......++|.+|+|.+++ +|++.+ .|.+.|-
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~~~~--~H~s~~N~s~~~R~ 210 (211)
T PF05721_consen 160 PEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFHSRL--IHGSGPNTSDDPRR 210 (211)
T ss_dssp CCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEETTS--EEEEE-B-SSSTEE
T ss_pred cccccccccccccccccCceEEeecCCCeEEEEcCCc--cccCCCCCCcCcCC
Confidence 0112336899999999997 899999 6666664
No 91
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=95.35 E-value=0.091 Score=54.85 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=82.2
Q ss_pred CcEEEEEeecCCCchHHHHH-HHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEeccce
Q psy14856 32 DKFLVITVASNETDGYKRFI-QSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDV 110 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~-~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv 110 (734)
-.++|++. .-++.....+ +.+...+..+.+.-..+.+............+....|=.+.++-.+-+ =||+.|+ |+
T Consensus 31 ~~~~il~~--~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~~~~-rvlylD~-D~ 106 (248)
T cd04194 31 YDFYILND--DISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLPDYD-KVLYLDA-DI 106 (248)
T ss_pred eEEEEEeC--CCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhcccC-EEEEEeC-CE
Confidence 34555553 3344334444 444445666666544433221110012233344444445544332234 6899999 99
Q ss_pred eEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCccc-CCCCCCCCcccccceeeeeHHHHHH------H---HHhccCC
Q psy14856 111 IIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDK-YPAVGSGYRYLNSGGFIGYAKDIKE------L---ISNRSIK 180 (734)
Q Consensus 111 ~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~-yP~~~~g~R~LNSG~~iG~a~~l~~------l---~~~~~~~ 180 (734)
+++.+.++|.+- .++.. .++|-..|++......+ ......+.+|.|||-++=.....++ + +++....
T Consensus 107 lv~~di~~L~~~--~~~~~-~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~ 183 (248)
T cd04194 107 IVLGDLSELFDI--DLGDN-LLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGR 183 (248)
T ss_pred EecCCHHHHhcC--CcCCC-EEEEEecccHHHHHHHHhhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCc
Confidence 999999999853 33333 33443444443221111 1112235779999999866554442 2 2221222
Q ss_pred CCCChhHHHHHhhhc
Q psy14856 181 NEEDDQLYYALLFLD 195 (734)
Q Consensus 181 d~~dDQl~~t~i~l~ 195 (734)
-...||-++..++-+
T Consensus 184 ~~~~DQd~LN~~~~~ 198 (248)
T cd04194 184 LIYPDQDILNAVLKD 198 (248)
T ss_pred eeeCChHHHHHHHhC
Confidence 345899999888755
No 92
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=95.29 E-value=0.33 Score=51.08 Aligned_cols=118 Identities=14% Similarity=0.204 Sum_probs=75.6
Q ss_pred cEEEEEEecCChhHHHHHHH-HHHcc--cCCCceEEEEEec--CCCCcHHHHHHHH---HHhccCcceEEEEeCCCC---
Q psy14856 292 SVLISVFIDKPTAFLEEFLN-KIANL--NYPAKKISMFVYN--NQEYHAPLFDDYI---HNFKTMFKNVKYIAHNST--- 360 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~-sL~~L--dYPk~ri~l~I~n--s~D~t~~il~~f~---~~~~~~y~~V~ii~~~~~--- 360 (734)
+|.|++-+||.++.|+.... +|.+| -.-.+.+.|-|+. |.|.|.+.++.+. ++.+-.+ ++........
T Consensus 1 k~fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~-~i~~~~~~~~~~~ 79 (241)
T PF11735_consen 1 KYFIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKEALRALDAELDALGVPH-SIVLSDITHRDEI 79 (241)
T ss_pred CEEEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCe-EEEeCCCcccccc
Confidence 58999999999999997777 65543 2233455555663 8999999999887 4444333 3333111111
Q ss_pred --------Cc-HHHHHHHHHHhhh-----h-cCccEEEEECCCccCCChHHHHHHHHcC---Cceeeec
Q psy14856 361 --------VN-SKEARNLAVENSL-----H-KGVDFYFYVDSDSHLDNPDVLKYLVNRN---ESLIAPL 411 (734)
Q Consensus 361 --------~g-~a~arN~al~~a~-----~-~~~DYlf~vDAD~~L~np~tL~~LI~~n---k~IVaP~ 411 (734)
+. -|+.||.||+--. + ...|.|+|++ |++++-.|+|+.|-..+ -...+.|
T Consensus 80 ~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCam 147 (241)
T PF11735_consen 80 ERPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMACAM 147 (241)
T ss_pred cccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCcccccchhhc
Confidence 11 2799999998433 1 4567899999 99998445665554444 2455543
No 93
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=95.16 E-value=0.14 Score=55.70 Aligned_cols=128 Identities=19% Similarity=0.234 Sum_probs=77.8
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEcc--CCcc----cCCCcCcccCCCCCCCCcccccceeeeeHHHHHH--
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGA--ERLC----WPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKE-- 172 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsa--e~~c----wP~~~l~~~yP~~~~g~R~LNSG~~iG~a~~l~~-- 172 (734)
=||..|+ |++|..+.++|.+-|.+++..-++++ |..+ |-. +.+. .| ..|.++.|||-..=-...+|+
T Consensus 99 kvLYLD~-Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~-~~~~-~~--~~~~~gFNSGVmLmNL~~wR~~~ 173 (304)
T cd06430 99 SLLYVDT-DILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYN-RFAR-HP--YYGKTGVNSGVMLMNLTRMRRKY 173 (304)
T ss_pred eEEEecc-ceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhh-hhcc-cC--cccccccccceeeeeHHHHHhhh
Confidence 6899999 99999999999998888876545544 3322 322 1111 11 134567999988877777776
Q ss_pred ------------------HHHhccCCCCCChhHHHHHhhhchhhh-----ccccccccccccccccccCCcccceecccC
Q psy14856 173 ------------------LISNRSIKNEEDDQLYYALLFLDETLR-----TKHKIVLDTLANLFQNLYGSLEDIKLNFDL 229 (734)
Q Consensus 173 ------------------l~~~~~~~d~~dDQl~~t~i~l~~~~r-----~~~~i~lD~~s~iFqnl~g~~~dv~l~~~~ 229 (734)
++++....-.-.||=.+.-++-+...+ .++|..+||. +|. .. .+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~--~y~----~~------~~- 240 (304)
T cd06430 174 FKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHC--MYG----SN------CK- 240 (304)
T ss_pred cccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCccccCCccce--eec----cc------cc-
Confidence 222211122457999998887664211 3455555543 111 10 00
Q ss_pred CCceeEEeeccCccceEEecCCCcc
Q psy14856 230 DEFVHLTNTKYNTNPVIIHGNGKSK 254 (734)
Q Consensus 230 ~~~~r~~n~~~~t~P~vih~Ng~~k 254 (734)
.+....|.|||||++.|
T Consensus 241 --------~~~~~~~~~~H~n~~~~ 257 (304)
T cd06430 241 --------AAEEEGVFILHGNRGVY 257 (304)
T ss_pred --------ccccccceEEEcCCCCC
Confidence 01123578999999987
No 94
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=95.10 E-value=0.3 Score=52.51 Aligned_cols=159 Identities=16% Similarity=0.169 Sum_probs=85.3
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCC-ccchH-HHHHHHHhhc-CCCCCeEEEEEecc
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLG-GGYKV-NLLKNELDEM-DITDDMIILVTDSY 108 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~g-gg~Ki-~~l~~~L~~~-~~~~D~lvl~vDsy 108 (734)
=.+||++-- -..+.+.++.+++...+.++...-+.+ +...-...++ +-... ..+|=.+.++ +++-| =||..|+
T Consensus 31 ~~fhii~d~-~s~~~~~~l~~~~~~~~~~i~f~~i~~-~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~d-kvLYLD~- 106 (280)
T cd06431 31 LHFHLITDE-IARRILATLFQTWMVPAVEVSFYNAEE-LKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLE-KVIVLDT- 106 (280)
T ss_pred EEEEEEECC-cCHHHHHHHHHhccccCcEEEEEEhHH-hhhhhccCcccchhhHHHHHHHHHHHhchhhcC-EEEEEcC-
Confidence 567777642 234557788788877787777654431 1110000010 11111 1122233332 21234 7899999
Q ss_pred ceeEeCCHHHHHHHHhcCCCcEEEcc-CC-cccCCCcCc-ccCCCCCCCCcccccceeeeeHHHHHHH------HH---h
Q psy14856 109 DVIIDGGVNDILERFNTFDANIVFGA-ER-LCWPDTSLY-DKYPAVGSGYRYLNSGGFIGYAKDIKEL------IS---N 176 (734)
Q Consensus 109 Dv~f~~~~~~ll~rf~~~~~~ilfsa-e~-~cwP~~~l~-~~yP~~~~g~R~LNSG~~iG~a~~l~~l------~~---~ 176 (734)
|++++.+..+|-+-|.++...-++++ +. ..|-..... ...|.... .+|.|||-.+=-...+|+. .. +
T Consensus 107 Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~-~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~ 185 (280)
T cd06431 107 DITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPAL-GRGFNTGVILLDLDKLRKMKWESMWRLTAER 185 (280)
T ss_pred CEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCccc-ccceeeeeeeeeHHHHHhhCHHHHHHHHHHH
Confidence 99999999999999877655445544 32 122222111 11111111 2599999988777766532 11 1
Q ss_pred c---cCCCCCChhHHHHHhhhc
Q psy14856 177 R---SIKNEEDDQLYYALLFLD 195 (734)
Q Consensus 177 ~---~~~d~~dDQl~~t~i~l~ 195 (734)
. ..+-.-.||=++..++-+
T Consensus 186 ~~~~~~~~~~~DQDiLN~v~~~ 207 (280)
T cd06431 186 ELMSMLSTSLADQDIFNAVIKQ 207 (280)
T ss_pred HHhhcCCCCcCcHHHHHHHHcC
Confidence 0 012346899999887755
No 95
>PLN02893 Cellulose synthase-like protein
Probab=95.09 E-value=0.31 Score=58.45 Aligned_cols=150 Identities=14% Similarity=0.149 Sum_probs=98.5
Q ss_pred CcceEEEEeCCCCC-----cHHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHHHHHHH--cCCc---eeeecccCCC
Q psy14856 348 MFKNVKYIAHNSTV-----NSKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVLKYLVN--RNES---LIAPLLVRPF 416 (734)
Q Consensus 348 ~y~~V~ii~~~~~~-----g~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL~~LI~--~nk~---IVaP~l~~~~ 416 (734)
..+.+..+..+++. -||.|.|.++... ...+++|++.+|||-+.+||++|++.+= .+.. -+| ++--|.
T Consensus 262 ~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~va-fVQfPQ 340 (734)
T PLN02893 262 TMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLG-YVQFPQ 340 (734)
T ss_pred cCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceE-EEeCcc
Confidence 36788888877764 3688999998753 3378999999999999988999998874 1211 111 221122
Q ss_pred cccccccccccCCccccc-hHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcc-----------------------
Q psy14856 417 KAWSNFWGALNADGFYAR-SFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATN----------------------- 472 (734)
Q Consensus 417 ~~wsNFWgal~~~GyY~R-sedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~----------------------- 472 (734)
+|..+..+.-|.- ..-+.++....+ -|.--.-++++..+.+|++|-...
T Consensus 341 -----~F~~i~~~D~y~~~~~vff~~~~~gl--DG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (734)
T PLN02893 341 -----IFHGINKNDIYAGELKRLFQINMIGM--DGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKS 413 (734)
T ss_pred -----cccCCCcCCCCcchhHHHHHHHhhcc--cccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccch
Confidence 2333444444443 335556666555 555445577788888988882100
Q ss_pred ---------c-cc------------ccccCCCchhHHHHHHHHHcCeeEEEeccc
Q psy14856 473 ---------I-KT------------IYTLNSMDYDMAFCTNLRNKGIHLKIDSTQ 505 (734)
Q Consensus 473 ---------~-~~------------~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~ 505 (734)
+ +- -|..+...||+.-+.++..+|+.-.++|..
T Consensus 414 ~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~ 468 (734)
T PLN02893 414 QEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPK 468 (734)
T ss_pred HHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCC
Confidence 0 01 122345699999999999999999999854
No 96
>KOG3737|consensus
Probab=94.43 E-value=0.1 Score=57.39 Aligned_cols=119 Identities=13% Similarity=0.281 Sum_probs=86.0
Q ss_pred CCCCcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEE-EEEec-CCC-CcHHHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856 288 DQFPSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKIS-MFVYN-NQE-YHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~-l~I~n-s~D-~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~ 363 (734)
+.+|+++|+|.-+|| -..|-+...|...-.=|+---+ ++|++ |.. +-.+.+.+++..... -|+++..+++.|.
T Consensus 152 e~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~fnG---lVkV~Rne~REGL 228 (603)
T KOG3737|consen 152 ENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLFNG---LVKVFRNERREGL 228 (603)
T ss_pred ccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHhcC---EEEEEecchhhhh
Confidence 468999999999999 4567888888887655543222 44555 332 234555556555432 6899999999999
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceee-eccc
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIA-PLLV 413 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVa-P~l~ 413 (734)
..||..|.+.| .++-++|+||-+-+. -++|--|++ .+++|.. |++.
T Consensus 229 I~aRSiGA~~a---tGeV~ifLDAHCEVn-tNWlpPLlAPI~rdRtvmTVP~ID 278 (603)
T KOG3737|consen 229 IQARSIGAQKA---TGEVLIFLDAHCEVN-TNWLPPLLAPISRDRTVMTVPLID 278 (603)
T ss_pred hhhhccchhhc---cccEEEEEecceeee-cccccccccccccCceEEEEeeee
Confidence 99999987664 799999999999995 999988886 4555443 5553
No 97
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=94.15 E-value=0.094 Score=47.39 Aligned_cols=78 Identities=22% Similarity=0.245 Sum_probs=43.4
Q ss_pred eeEEEEcCCCCCCCCccc-cCCceEEEEEecCCCCcCCCccEEEeecc--------------------ceeecccceeEE
Q psy14856 647 SFVVRYRPDEQPSLRPHH-DSSTYTINIALNQVGVDYEGGGCRFIRYN--------------------CNVTATRMGWML 705 (734)
Q Consensus 647 ~fvvrY~~~~~~~l~~H~-D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--------------------~~v~~~~~G~al 705 (734)
+.++.++++.. ..+|. .+|.++-..+|.-+. +.|.+.|...+ -...+|+.|..|
T Consensus 2 ~W~ni~~~g~~--~~~H~H~~s~~SgVyYv~~p~---~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G~lv 76 (101)
T PF13759_consen 2 SWANIYRKGGY--NEPHNHPNSWLSGVYYVQVPE---GSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEGDLV 76 (101)
T ss_dssp EEEEEE-TT----EEEE--TT-SEEEEEECE--T---TS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TTEEE
T ss_pred eeEEEeCCCCc--cCceECCCcCEEEEEEEECCC---CCCceeeeCCCccceecccccccccCcccCceEEeCCCCCEEE
Confidence 45677776654 44454 467899999998732 66788886421 124569999999
Q ss_pred EeCCCcccccCcccCCceeEEEEEee
Q psy14856 706 MHPGRLTHYHEGLQVTQGTRYIMISF 731 (734)
Q Consensus 706 ~h~g~lth~H~g~~vT~G~Ryilv~F 731 (734)
|||+.| +|+..|-.+...-|-|+|
T Consensus 77 lFPs~l--~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 77 LFPSWL--WHGVPPNNSDEERISISF 100 (101)
T ss_dssp EEETTS--EEEE----SSS-EEEEEE
T ss_pred EeCCCC--EEeccCcCCCCCEEEEEc
Confidence 999997 799999887654455555
No 98
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=94.13 E-value=0.98 Score=48.82 Aligned_cols=153 Identities=16% Similarity=0.109 Sum_probs=84.7
Q ss_pred eecCCCCChHHHHHHHHHHHH-hCCCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHH-HHhhchhhhhhhcCCC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEA-YGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFL-RKYVVPLQEREFIGYH 638 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~-~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l-~~~v~P~~~~~f~~~~ 638 (734)
|....+||++..++|.+++|. ....+... ....+++ ..-+++.|.. ...+..++ ...|..+++.++++-.
T Consensus 17 v~~~~~~s~eei~~L~~~~~~~l~~~~~~~---~~~~~~~-~~~~~~~~~~----~~~~~~l~~~~~l~~~~~~llG~~v 88 (288)
T TIGR01762 17 IGPFTLYSPEEMKETWKRIRLRLLDRSAAP---YQDLGGT-NIANYDRHLD----DDFLASHICRPEICHRVESILGPNV 88 (288)
T ss_pred EeCcCCCCHHHHHHHHHHHHHHhhcccccc---ccCCCCc-eeEeeeeccc----CHHHHHHhcCHHHHHHHHHHhCCcE
Confidence 667789999999999999874 22111101 0000111 1112222221 22333333 3355566666665321
Q ss_pred CCCCCCcceeEEEEcCCCCCCCCccccCC--------------------ceEEEEEecCCCCcCCCccEEEee----cc-
Q psy14856 639 HEPVRAPMSFVVRYRPDEQPSLRPHHDSS--------------------TYTINIALNQVGVDYEGGGCRFIR----YN- 693 (734)
Q Consensus 639 ~~~l~~~~~fvvrY~~~~~~~l~~H~D~S--------------------~~T~ni~Ln~~~~dfeGGg~~F~~----~~- 693 (734)
- ..+..++.|.. +.. ...+|.|.+ .+|+-|+|.+. .-+-|.++|.. ..
T Consensus 89 --~-l~~~~~~~K~p-g~~-~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~--t~eNG~L~viPGSH~~~~ 161 (288)
T TIGR01762 89 --L-CWRTEFFPKYP-GDE-GTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDA--TIENGCMQFIPGTHNSMN 161 (288)
T ss_pred --E-eeeceeeeeCC-CCC-CCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccC--CcccCCEEEECCCCCCCC
Confidence 1 12333455553 332 478999942 38888999885 45666666621 00
Q ss_pred ------------------------------------------c----eeecccceeEEEeCCCcccccCcccCCce--eE
Q psy14856 694 ------------------------------------------C----NVTATRMGWMLMHPGRLTHYHEGLQVTQG--TR 725 (734)
Q Consensus 694 ------------------------------------------~----~v~~~~~G~al~h~g~lth~H~g~~vT~G--~R 725 (734)
+ ....-++|.+++|.+++ +|++.+-++. +|
T Consensus 162 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~~~t--~HgS~~N~S~~~~R 239 (288)
T TIGR01762 162 YDETRRMTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWSTL--MHASYPNSGESQMR 239 (288)
T ss_pred CCcccccccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEECCCc--eecCCCCCCCCceE
Confidence 0 01124789999999996 8999998763 36
Q ss_pred EEEEe
Q psy14856 726 YIMIS 730 (734)
Q Consensus 726 yilv~ 730 (734)
-.++.
T Consensus 240 ~~~~~ 244 (288)
T TIGR01762 240 MGFAS 244 (288)
T ss_pred EEEEE
Confidence 55544
No 99
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=93.86 E-value=0.14 Score=55.85 Aligned_cols=78 Identities=18% Similarity=0.279 Sum_probs=60.0
Q ss_pred cceeEEEEcCCCCCCCCccccC--------CceEEEEEecCCCCcCCCccEEEeeccc-eeecccceeEEEeCCCccccc
Q psy14856 645 PMSFVVRYRPDEQPSLRPHHDS--------STYTINIALNQVGVDYEGGGCRFIRYNC-NVTATRMGWMLMHPGRLTHYH 715 (734)
Q Consensus 645 ~~~fvvrY~~~~~~~l~~H~D~--------S~~T~ni~Ln~~~~dfeGGg~~F~~~~~-~v~~~~~G~al~h~g~lth~H 715 (734)
.+.-+++|..|.. |..|+|. .++++.++|+.+. +||.|.+.=..+ +.. -..+.-+||.-+| -|
T Consensus 79 n~iTfikY~kGd~--f~~~~d~~~~~~~n~~~y~LvLyL~~~~---~GGktkiyi~~~~~tv-I~~~~DvLFdKsl--~h 150 (339)
T PF03336_consen 79 NTITFIKYEKGDF--FDNHRDFIKRDSKNCLEYHLVLYLNNPE---NGGKTKIYIDPNDNTV-ISTSEDVLFDKSL--NH 150 (339)
T ss_pred ceEEEEEEccCcc--hhhhcccceeccCCceEEEEEEEEeccC---CCceEEEEECCCCcee-eeccccEEEeccc--cc
Confidence 3566789977764 8889984 3599999999954 899999864332 211 2568889999998 69
Q ss_pred CcccCCceeEEEEEe
Q psy14856 716 EGLQVTQGTRYIMIS 730 (734)
Q Consensus 716 ~g~~vT~G~Ryilv~ 730 (734)
+...|++|+++|++.
T Consensus 151 ~s~~V~~G~K~VAl~ 165 (339)
T PF03336_consen 151 ESIIVEEGRKIVALF 165 (339)
T ss_pred cceEeccCeEEEEEE
Confidence 999999999999653
No 100
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=93.79 E-value=0.35 Score=49.19 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=62.0
Q ss_pred chHHHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccc
Q psy14856 82 YKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSG 161 (734)
Q Consensus 82 ~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG 161 (734)
.|++.+.+.|+.- - =|+++|+ ||+|..+|-.++ ...+..|+++.|. |..... .......|+|
T Consensus 54 ~K~~~~~~~L~~G---~--~vl~~D~-Dvv~~~dp~~~~---~~~~~Di~~~~d~--~~~~~~-------~~~~~~~n~G 115 (212)
T PF03407_consen 54 LKPKVLLDLLELG---Y--DVLFSDA-DVVWLRDPLPYF---ENPDADILFSSDG--WDGTNS-------DRNGNLVNTG 115 (212)
T ss_pred HHHHHHHHHHHcC---C--ceEEecC-CEEEecCcHHhh---ccCCCceEEecCC--Ccccch-------hhcCCccccc
Confidence 4566666666532 2 3888999 999999998888 3367788888743 322110 1112335898
Q ss_pred ee-eeeHHHHHHHHHhcc--C--CCCCChhHHHHHhhhch
Q psy14856 162 GF-IGYAKDIKELISNRS--I--KNEEDDQLYYALLFLDE 196 (734)
Q Consensus 162 ~~-iG~a~~l~~l~~~~~--~--~d~~dDQl~~t~i~l~~ 196 (734)
-+ +=.-+..++++++|. . .....||-.++.+....
T Consensus 116 ~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~ 155 (212)
T PF03407_consen 116 FYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQ 155 (212)
T ss_pred eEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhc
Confidence 54 455567778888873 1 22346999998886554
No 101
>KOG3588|consensus
Probab=93.19 E-value=3.7 Score=45.41 Aligned_cols=201 Identities=12% Similarity=0.179 Sum_probs=124.1
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
+.|.|.+++|.+-....+..|.+++....=-+.++.+.+.+ |+|.-.+. +-.......|..+.++.....-+-+.|.
T Consensus 227 ~~pgih~i~pl~gr~~~f~rf~q~~c~~~d~~l~l~vv~f~~se~e~ak~--e~~tslra~f~~~q~l~lngeFSRa~aL 304 (494)
T KOG3588|consen 227 EDPGIHMIMPLRGRAAIFARFAQSICARGDDRLALSVVYFGYSEDEMAKR--ETITSLRASFIPVQFLGLNGEFSRAKAL 304 (494)
T ss_pred cCCCceEEEeccchHHHhhhhhHHHhccCCCceEEEEEEecCCChHHHhh--hHHHHHhhcCCceEEecccchhhhhHHH
Confidence 35889999999999999999999888775444444433334 55544333 3334455567778777655444545555
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCCceeeecccC---CCcccccccccccCCccccchHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNESLIAPLLVR---PFKAWSNFWGALNADGFYARSFDYMNI 441 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk~IVaP~l~~---~~~~wsNFWgal~~~GyY~Rsedy~~i 441 (734)
..|.+.- ..---+||.|.|.+++ -+.|+..-. .+++|--|++-+ |.-.|+ ++----.+.++-|
T Consensus 305 ~vGAe~~--~~nvLLFfcDVDi~FT-~efL~rcr~Nt~~gkqiyfPivFS~ynp~ivy~--------~~~~~p~e~~~~~ 373 (494)
T KOG3588|consen 305 MVGAETL--NANVLLFFCDVDIYFT-TEFLNRCRLNTILGKQIYFPIVFSQYNPEIVYE--------QDKPLPAEQQLVI 373 (494)
T ss_pred HhhHHHh--ccceeEEEeccceeeh-HHHHHHHhhccCCCceEEEEEEEeecCcceeec--------CCCCCchhHheee
Confidence 5555442 2346789999999999 999987654 488999998832 322211 1111224455433
Q ss_pred HhcccCCcceeeeceeeeEEeeehhhHhhcccccccc---cCCCchhHHHHHHHHHcCeeEEEecccceEEe
Q psy14856 442 INGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYT---LNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHL 510 (734)
Q Consensus 442 ~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~---~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l 510 (734)
-+ . .|-|.==+-+.+-.-+.+.++- .-|+ .+.=.||.++-..+-+.|+.+.=+...-.-|+
T Consensus 374 ~~--~--tGfwRdfGfGmtc~yrsd~~~v----gGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~ 437 (494)
T KOG3588|consen 374 KK--D--TGFWRDFGFGMTCQYRSDFLTV----GGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHL 437 (494)
T ss_pred cc--c--cccccccCCceeEEeeccceee----cCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEe
Confidence 32 2 5666422222233345555554 2355 34457999999999999977766665544454
No 102
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=92.50 E-value=0.85 Score=51.06 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=65.8
Q ss_pred hheeccccCCCCCCCCcEEEEEeecCC------CchH-HHH----HHHHHHcCCcceeeccCcccCCCCCCCCCccchHH
Q psy14856 17 FFISVHCNKVKNIDEDKFLVITVASNE------TDGY-KRF----IQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVN 85 (734)
Q Consensus 17 ~~~~~~~~~~~~~~~~~l~vltvat~~------~~~~-~r~----~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~ 85 (734)
||..-|.........+++++||+.... .+.+ .|. +..|+.+||.+-+ .+. .+. ...++.-.|+.
T Consensus 112 wl~~~p~~~~~~~g~prVviVT~sdp~~c~n~~gd~yLlks~kNK~dYAr~HGY~~fy-n~~-~ld---~~~p~~WaKlp 186 (429)
T PLN03182 112 WLRKNPGFPSFVNGKPRVLLVTGSQPKPCENPVGDHYLLKSLKNKIDYCRLHGIEIFY-NMA-HLD---AEMAGFWAKLP 186 (429)
T ss_pred HHHhCCCCCCccCCCCCEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHHHHhCCEEEe-ehh-hcC---cCCCcchhHHH
Confidence 555444444433456789999977654 3333 444 3789999998754 221 111 12346678999
Q ss_pred HHHHHHhhcCCCCCeEEEEEeccceeEeCCH-HHHHHHHhcCC
Q psy14856 86 LLKNELDEMDITDDMIILVTDSYDVIIDGGV-NDILERFNTFD 127 (734)
Q Consensus 86 ~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~-~~ll~rf~~~~ 127 (734)
.|+++|.++++ =+-|..+|+ |++|+-+. +.=++||...+
T Consensus 187 aLR~aM~~~Pe--aEWiWWLDs-DALImNmsfelPlery~~~N 226 (429)
T PLN03182 187 LLRKLMLAHPE--VEWIWWMDS-DALFTDMTFEIPLEKYEGYN 226 (429)
T ss_pred HHHHHHHHCCC--ceEEEEecC-CceeecCCCCCCHhHcCCcC
Confidence 99999998753 348999998 66665433 33377887664
No 103
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=92.27 E-value=1.1 Score=51.60 Aligned_cols=107 Identities=20% Similarity=0.268 Sum_probs=65.3
Q ss_pred CcEEEEEEecCChhH-----HHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHH--HHH---HhccCcceEEEEeCCC
Q psy14856 291 PSVLISVFIDKPTAF-----LEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDD--YIH---NFKTMFKNVKYIAHNS 359 (734)
Q Consensus 291 P~V~I~I~i~n~~~~-----L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~--f~~---~~~~~y~~V~ii~~~~ 359 (734)
-+-.|++|+|||.+- |+..-+||.+-- -.....+||-+ |.|-.....++ |++ +.+. +.+|-+....+
T Consensus 144 hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g-~~~ifYRrRr~ 221 (736)
T COG2943 144 HRTAILMPIYNEDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDIALAEQKAWAELCRELGG-EGNIFYRRRRR 221 (736)
T ss_pred cceeEEeeccccCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchhhhhHHHHHHHHHHHhCC-CCceeeehHhh
Confidence 368899999999653 444555555432 22456677775 65655444433 442 2221 12343333333
Q ss_pred CCcHHHHHHHHHHhhhh--cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 360 TVNSKEARNLAVENSLH--KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 360 ~~g~a~arN~al~~a~~--~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|.+ .+|=|.+ +.|+. ..++|.+.+|||.+.+ ++++-.|++
T Consensus 222 n~~-RKaGNIa-DfcrRwG~~Y~~MlVLDADSvMt-gd~lvrLv~ 263 (736)
T COG2943 222 NVK-RKAGNIA-DFCRRWGSAYSYMLVLDADSVMT-GDCLVRLVR 263 (736)
T ss_pred hhc-ccccCHH-HHHHHhCcccceEEEeecccccC-chHHHHHHH
Confidence 321 2233333 68887 6789999999999998 999999985
No 104
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=91.34 E-value=0.82 Score=43.89 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=51.3
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
-+|.|+||-||.+.-|..||..|.. |.=.+....|||.+-.|.. .-..+...|.
T Consensus 47 ~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~~y~I~vieQ~~~~-------------------------~FNRg~L~Nv 101 (136)
T PF13733_consen 47 HKVAIIIPYRDREEHLRIFLPHLHPFLQRQQLDYRIFVIEQVDNG-------------------------PFNRGKLMNV 101 (136)
T ss_dssp -EEEEEEEESS-HHHHHHHHHHHHHHHHHTT-EEEEEEEEE-SSS----------------------------HHHHHHH
T ss_pred cceEEEEEeCCHHHHHHHHHHHHHHHHhhCcceEEEEEEeeccCC-------------------------CCchhhhhhH
Confidence 3899999999999999999887642 2212334556666522221 1235678899
Q ss_pred HHHhhhh-cCccEEEEECCCccCCCh
Q psy14856 370 AVENSLH-KGVDFYFYVDSDSHLDNP 394 (734)
Q Consensus 370 al~~a~~-~~~DYlf~vDAD~~L~np 394 (734)
|...|++ ..+|+++|-|.|.+..|.
T Consensus 102 Gf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 102 GFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp HHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred HHHHHhhccCCCEEEEecccccccCC
Confidence 9988877 579999999999998753
No 105
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=91.01 E-value=2.1 Score=45.55 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=72.4
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCc-ccCCCCC------------------CCCCccchHHHHHHHHh
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQ-PWLGGDM------------------SSLGGGYKVNLLKNELD 92 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~-~W~gg~~------------------~~~ggg~Ki~~l~~~L~ 92 (734)
=.+||+|-... .+.+.++...+...+..+++..... .|++... .......+..-+|=.+.
T Consensus 30 ~~fhvvtd~~s-~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip 108 (257)
T cd06429 30 LVFHIVTDNQN-YGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTSNLKQRKPEYISLLNFARFYLP 108 (257)
T ss_pred eEEEEecCccC-HHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhccccccccccCCccccCHHHHHHHHHH
Confidence 46788875444 4777888888877888998887744 3444421 11223344444444444
Q ss_pred hcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccceeeeeHHHHH
Q psy14856 93 EMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIK 171 (734)
Q Consensus 93 ~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG~~iG~a~~l~ 171 (734)
++-..-+ =||+.|+ |++++.+-++|.+. .++..++-+.+. |-|||-++=-....|
T Consensus 109 ~llp~~~-kvlYLD~-Dviv~~dl~eL~~~--dl~~~~~aav~d--------------------yfNsGV~linl~~wr 163 (257)
T cd06429 109 ELFPKLE-KVIYLDD-DVVVQKDLTELWNT--DLGGGVAGAVET--------------------SWNPGVNVVNLTEWR 163 (257)
T ss_pred HHhhhhC-eEEEEeC-CEEEeCCHHHHhhC--CCCCCEEEEEhh--------------------hcccceEEEeHHHHH
Confidence 4211124 5788899 99999999999865 555555433322 579998887766555
No 106
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=90.39 E-value=3 Score=42.01 Aligned_cols=161 Identities=14% Similarity=0.159 Sum_probs=83.2
Q ss_pred CCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH-----HHHHHHHHHhhhhcCccEEEEECCCccCCC
Q psy14856 319 PAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS-----KEARNLAVENSLHKGVDFYFYVDSDSHLDN 393 (734)
Q Consensus 319 Pk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~-----a~arN~al~~a~~~~~DYlf~vDAD~~L~n 393 (734)
.+.++.+++..+.+. .+.+++.+++....|.++-+..-.+.-.. ..+-+-+.+.| .+.+|++.+|-|+++.
T Consensus 19 ~~~~~~FvvG~~~~~-~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c--~~~~~v~k~DDD~~vn- 94 (195)
T PF01762_consen 19 VRVKVVFVVGESPNS-DSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHC--PNAKYVLKVDDDVFVN- 94 (195)
T ss_pred CcEEEEEEEecCCCC-cHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhC--CchhheeecCcEEEEe-
Confidence 344443344444322 23444444444555677665554433221 33444455555 3589999999999995
Q ss_pred hHHHHHHHHcC-----CceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcceeeeceee-eEEeeehhh
Q psy14856 394 PDVLKYLVNRN-----ESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSV 467 (734)
Q Consensus 394 p~tL~~LI~~n-----k~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~v 467 (734)
++.|...+... +..+..-..+......+ ....+|.-.+.| . .+.|. ||.+ .+|++++++
T Consensus 95 ~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~-----~~~kw~v~~~~y-------~--~~~yP-~y~~G~~yvls~~~ 159 (195)
T PF01762_consen 95 PDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRD-----PSSKWYVSEEEY-------P--DDYYP-PYCSGGGYVLSSDV 159 (195)
T ss_pred hHHhhhhhhhcccCccccccccccccCCccccc-----cccCceeeeeec-------c--cccCC-CcCCCCeEEecHHH
Confidence 88887777643 11111111000000000 001112222222 1 33333 4444 689999999
Q ss_pred Hhhcccc-cccccCCCchhHHHHHHHHHcCeeE
Q psy14856 468 IKATNIK-TIYTLNSMDYDMAFCTNLRNKGIHL 499 (734)
Q Consensus 468 L~~~~~~-~~f~~~~~deDm~Fc~~ar~~Gi~m 499 (734)
++. -.. ........-||.-+..-+++.||..
T Consensus 160 v~~-i~~~~~~~~~~~~eDv~iGi~~~~~~i~~ 191 (195)
T PF01762_consen 160 VKR-IYKASSHTPFFPLEDVFIGILAEKLGIKP 191 (195)
T ss_pred HHH-HHHHhhcCCCCCchHHHHHHHHHHCCCCc
Confidence 986 332 1111233579999999999999865
No 107
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=88.58 E-value=3.2 Score=45.79 Aligned_cols=102 Identities=17% Similarity=0.265 Sum_probs=63.0
Q ss_pred CcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEEEEecCCC----C---cHHHHHHHHHHhccCcceEEEEeCCC---
Q psy14856 291 PSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISMFVYNNQE----Y---HAPLFDDYIHNFKTMFKNVKYIAHNS--- 359 (734)
Q Consensus 291 P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~I~ns~D----~---t~~il~~f~~~~~~~y~~V~ii~~~~--- 359 (734)
-...|+||+.||. +.|+-.|..| |.+-..|+|.||+- . -.+++++|-.-.. +.+-+|...+
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~gI-----Ph~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~---r~~~~vHQkDp~l 121 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLSGI-----PHDCLIIVVSNSSREPVDRFKMEVDLLKHFCRLTR---RQIIIVHQKDPGL 121 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHHCS------TTSEEEEEE---CSSSCHHHHHHHHHHHHHHHCT-----EEEEETT-HHH
T ss_pred hCcEEEEECCCCchhhhhhhhhcC-----CCCCeEEEEECCCCCCccHHHHHHHHHHHHHHhhc---CceEEEecCCHHH
Confidence 4689999999994 5566677665 77777676767543 2 2456676664332 2444444322
Q ss_pred -------------------CCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 360 -------------------TVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 360 -------------------~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
+-|++++.=.|+-.|+....+|+=|+|||+.+ |.+..+-+.
T Consensus 122 A~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyi--PGaV~EYvk 181 (381)
T PF09488_consen 122 AEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYI--PGAVNEYVK 181 (381)
T ss_dssp HHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS---HHHHHHHHH
T ss_pred HHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCC--cchHHHHHH
Confidence 12578888889888888999999999999998 777777664
No 108
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=88.20 E-value=1 Score=46.07 Aligned_cols=90 Identities=16% Similarity=0.197 Sum_probs=46.7
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCC----cccCCCcCcccCCCCCCCCcccccceeeeeHHHHHH--HH
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAER----LCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKE--LI 174 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~----~cwP~~~l~~~yP~~~~g~R~LNSG~~iG~a~~l~~--l~ 174 (734)
=||+.|+ |+++..+.++|.+--.+ ...+-+++. .++-........+. ..++++.|||-++=-.+..++ +.
T Consensus 101 rilyLD~-D~lv~~dl~~lf~~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~fNsGv~l~~~~~~~~~~~~ 176 (250)
T PF01501_consen 101 RILYLDA-DTLVLGDLDELFDLDLQ--GKYLAAVEDESFDNFPNKRFPFSERKQ-PGNKPYFNSGVMLFNPSKWRKENIL 176 (250)
T ss_dssp EEEEE-T-TEEESS-SHHHHC---T--TSSEEEEE----HHHHTSTTSSEEECE-STTTTSEEEEEEEEEHHHHHHHHHH
T ss_pred eEEEEcC-CeeeecChhhhhcccch--hhhccccccchhhhhhhcccchhhccc-CcccccccCcEEEEeechhhhhhhh
Confidence 7899999 99999999999864333 333333322 11111111111111 134889999977754444432 22
Q ss_pred Hhc-------cCCCCCChhHHHHHhhh
Q psy14856 175 SNR-------SIKNEEDDQLYYALLFL 194 (734)
Q Consensus 175 ~~~-------~~~d~~dDQl~~t~i~l 194 (734)
+.+ .....-.||-++..++-
T Consensus 177 ~~~~~~~~~~~~~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 177 QKLIEWLEQNGMKLGFPDQDILNIVFY 203 (250)
T ss_dssp HHHHHHHHHTTTT-SSCHHHHHHHHHT
T ss_pred hhhhhhhhhcccccCcCchHHHhhhcc
Confidence 221 11235689999987765
No 109
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=86.75 E-value=4.5 Score=43.19 Aligned_cols=99 Identities=16% Similarity=0.294 Sum_probs=57.5
Q ss_pred CCcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc--HHHH
Q psy14856 290 FPSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN--SKEA 366 (734)
Q Consensus 290 ~P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g--~a~a 366 (734)
.-+|.|.+++=.. ..|++.|++|-++-=-|..+++.||-. |.... +... +.+. -++++++.-.+..+ ....
T Consensus 33 n~tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFT--D~~~~-~p~v--~lg~-~r~~~V~~v~~~~~W~~~sl 106 (271)
T cd02515 33 NITIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFT--DKPAA-VPEV--ELGP-GRRLTVLKIAEESRWQDISM 106 (271)
T ss_pred CCEEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEe--CCccc-Cccc--ccCC-CceeEEEEeccccCCcHHHH
Confidence 3578888888444 559999999999988888888866654 22111 1000 1111 13455554422222 2222
Q ss_pred HH-----HHHHhhhhcCccEEEEECCCccCCCh
Q psy14856 367 RN-----LAVENSLHKGVDFYFYVDSDSHLDNP 394 (734)
Q Consensus 367 rN-----~al~~a~~~~~DYlf~vDAD~~L~np 394 (734)
+. ..++.-....+||+|++|+|..+.++
T Consensus 107 ~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ 139 (271)
T cd02515 107 RRMKTLADHIADRIGHEVDYLFCMDVDMVFQGP 139 (271)
T ss_pred HHHHHHHHHHHHhhcccCCEEEEeeCCceEeec
Confidence 22 22222223589999999999998764
No 110
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=86.60 E-value=2.2 Score=44.60 Aligned_cols=76 Identities=18% Similarity=0.272 Sum_probs=46.0
Q ss_pred eEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccceeeeeHH--HHHHHHHhc
Q psy14856 100 MIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAK--DIKELISNR 177 (734)
Q Consensus 100 ~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG~~iG~a~--~l~~l~~~~ 177 (734)
+=||+.|+ |+++..+.++|.+. +.. +.++ |+.. .+.+.|||-++=..+ ...++++..
T Consensus 91 drvlylD~-D~~v~~~i~~Lf~~----~~~-~~a~-----~d~~----------~~~~fNsGv~l~~~~~~~~~~~~~~~ 149 (240)
T cd02537 91 DKVVFLDA-DTLVLRNIDELFDL----PGE-FAAA-----PDCG----------WPDLFNSGVFVLKPSEETFNDLLDAL 149 (240)
T ss_pred ceEEEEeC-CeeEccCHHHHhCC----CCc-eeee-----cccC----------ccccccceEEEEcCCHHHHHHHHHHH
Confidence 37999999 99999999999764 222 2222 1110 045789876653322 233344432
Q ss_pred c--CCCCCChhHHHHHhhhch
Q psy14856 178 S--IKNEEDDQLYYALLFLDE 196 (734)
Q Consensus 178 ~--~~d~~dDQl~~t~i~l~~ 196 (734)
. .+-...||-+++.+|-+.
T Consensus 150 ~~~~~~~~~DQdiLN~~~~~~ 170 (240)
T cd02537 150 QDTPSFDGGDQGLLNSYFSDR 170 (240)
T ss_pred hccCCCCCCCHHHHHHHHcCC
Confidence 1 123558999999888554
No 111
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=85.68 E-value=4.4 Score=42.31 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=53.2
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCC---CCCCCCcccccceeeeeHHHHH--HHHH
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYP---AVGSGYRYLNSGGFIGYAKDIK--ELIS 175 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP---~~~~g~R~LNSG~~iG~a~~l~--~l~~ 175 (734)
=||+.|+ |++++.+.++|.+-.. +.. .++|=..|+.... ...+. ....+.+|.|||-++=-....+ ++++
T Consensus 98 kvlYLD~-D~iv~~di~~L~~~~l--~~~-~~aav~d~~~~~~-~~~~~~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~ 172 (246)
T cd00505 98 KILYVDA-DILVLTDIDELWDTPL--GGQ-ELAAAPDPGDRRE-GKYYRQKRSHLAGPDYFNSGVFVVNLSKERRNQLLK 172 (246)
T ss_pred eEEEEcC-CeeeccCHHHHhhccC--CCC-eEEEccCchhhhc-cchhhcccCCCCCCCceeeeeEEEechHHHHHHHHH
Confidence 5889999 9999999999985332 333 4444344443211 11111 0113467999999887666663 2222
Q ss_pred h----cc---CCCCCChhHHHHHhhhc
Q psy14856 176 N----RS---IKNEEDDQLYYALLFLD 195 (734)
Q Consensus 176 ~----~~---~~d~~dDQl~~t~i~l~ 195 (734)
. +. ..-...||-++..++-+
T Consensus 173 ~~~~~~~~~~~~~~~~DQd~LN~~~~~ 199 (246)
T cd00505 173 VALEKWLQSLSSLSGGDQDLLNTFFKQ 199 (246)
T ss_pred HHHHHHHhhcccCccCCcHHHHHHHhc
Confidence 1 11 12356799999888755
No 112
>PLN03181 glycosyltransferase; Provisional
Probab=84.88 E-value=7 Score=44.13 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=61.2
Q ss_pred CCCcEEEEEeec----C--CCchH-HHHH----HHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCC
Q psy14856 30 DEDKFLVITVAS----N--ETDGY-KRFI----QSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITD 98 (734)
Q Consensus 30 ~~~~l~vltvat----~--~~~~~-~r~~----~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~ 98 (734)
..+++++||+.. + -.+.+ .|.+ ..|+.+||.+-..-... +...++.-.|+-+|+.+|.++++
T Consensus 126 ~~prVViVT~Sdp~~C~~~~gD~~LlriikNR~dYArrHGY~lf~~~a~L-----d~~~p~~WaKipalRaAM~a~Pe-- 198 (453)
T PLN03181 126 AEERVVMVTGSQPTPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALL-----HPKMNSYWAKLPVVRAAMLAHPE-- 198 (453)
T ss_pred CCCCEEEEECCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCcEEEecccc-----CccCchhhhHHHHHHHHHHHCCC--
Confidence 358899999876 2 23333 4544 78999999987442111 11245677899999999999864
Q ss_pred CeEEEEEeccceeEeCCHHH-HHHHHhcCC
Q psy14856 99 DMIILVTDSYDVIIDGGVND-ILERFNTFD 127 (734)
Q Consensus 99 D~lvl~vDsyDv~f~~~~~~-ll~rf~~~~ 127 (734)
=+-|..+|+ |++|.-+--. =++||...+
T Consensus 199 AEWfWWLDs-DALIMNp~~sLPl~ry~~~N 227 (453)
T PLN03181 199 AEWIWWVDS-DAVFTDMDFKLPLHRYRDHN 227 (453)
T ss_pred ceEEEEecC-CceeecCCCCCCHhhcCCcc
Confidence 458999999 7777766322 266887654
No 113
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=84.52 E-value=7.2 Score=43.63 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=63.3
Q ss_pred CCcEEEEEeecCCCchHHHHHHHHHHcCCc--cee--eccCcc---------cCCC-----C-------CCCCCccchHH
Q psy14856 31 EDKFLVITVASNETDGYKRFIQSAEVNKLQ--VKT--LGLHQP---------WLGG-----D-------MSSLGGGYKVN 85 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~~r~~~Sa~~~~y~--~~v--lg~g~~---------W~gg-----~-------~~~~ggg~Ki~ 85 (734)
.+++-|++||=++.+.+.+.++|.....|| .+| +.-|.. +... . ....|.+-|..
T Consensus 39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~ 118 (384)
T TIGR03469 39 WPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLW 118 (384)
T ss_pred CCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHH
Confidence 467999999999999999999999888786 243 322211 1000 0 01234455666
Q ss_pred HHHHHHhhcCCC--CCeEEEEEeccceeEeCCH-HHHHHHHhcCCCcEE
Q psy14856 86 LLKNELDEMDIT--DDMIILVTDSYDVIIDGGV-NDILERFNTFDANIV 131 (734)
Q Consensus 86 ~l~~~L~~~~~~--~D~lvl~vDsyDv~f~~~~-~~ll~rf~~~~~~il 131 (734)
.+...++.-++. +.++|+|+|+ |+.+.... +.+++.+.+.+..++
T Consensus 119 A~n~g~~~A~~~~~~gd~llflDa-D~~~~p~~l~~lv~~~~~~~~~~v 166 (384)
T TIGR03469 119 AVSQGIAAARTLAPPADYLLLTDA-DIAHGPDNLARLVARARAEGLDLV 166 (384)
T ss_pred HHHHHHHHHhccCCCCCEEEEECC-CCCCChhHHHHHHHHHHhCCCCEE
Confidence 777766653311 1359999999 77654443 778888876554443
No 114
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=83.04 E-value=12 Score=36.27 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=60.2
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|+..++++.+.. -+++ +|..+.+ ...+.++.... .+.++..+ ...|...+-..|++.+.+ .+
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~i--~vv~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~G~~~~i~~al~~~~~-~~ 91 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSRV--IVVLGAE--ADAVRAALAGL-----PVVVVINPDWEEGMSSSLAAGLEALPA-DA 91 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCcE--EEECCCc--HHHHHHHhcCC-----CeEEEeCCChhhCHHHHHHHHHHhccc-cC
Confidence 45789999999999872 2343 3433222 12223333221 34444433 234556666667766532 58
Q ss_pred cEEEEECCCccCCChHHHHHHHHc----CCceeeecc
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL 412 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l 412 (734)
|++|++.+|.-+-+++.++.|++. +..++.|..
T Consensus 92 ~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~~ 128 (186)
T cd04182 92 DAVLILLADQPLVTAETLRALIDAFREDGAGIVAPVY 128 (186)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEec
Confidence 999999999944349999999873 445666654
No 115
>KOG3916|consensus
Probab=82.85 E-value=16 Score=40.18 Aligned_cols=168 Identities=15% Similarity=0.203 Sum_probs=95.9
Q ss_pred cccccccCCeeccCccccCCCCCCCCCcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHH
Q psy14856 265 AKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIH 343 (734)
Q Consensus 265 ~~~w~~~gc~~c~~~~~l~~~~~~~~P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~ 343 (734)
++.|.+++|.. .-+|.|+||-||.+.-|..+|..|.- |.=......|||.+...
T Consensus 139 GG~~~P~dC~a--------------r~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL~y~iyVieQ~g----------- 193 (372)
T KOG3916|consen 139 GGRYRPEDCQA--------------RHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRLDYRIYVIEQAG----------- 193 (372)
T ss_pred CCCcCCCCCCc--------------cceeEEEeecccHHHHHHHHHHHhhHHHHhhhhceeEEEEEecC-----------
Confidence 44788887876 34799999999999999999988752 11111112244433111
Q ss_pred HhccCcceEEEEeCCCCCcHHHHHHHHHHhhhh-cCccEEEEECCCccCCChHHHHHHHHcCCceeeecccCCCcccccc
Q psy14856 344 NFKTMFKNVKYIAHNSTVNSKEARNLAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNF 422 (734)
Q Consensus 344 ~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~~~~~~wsNF 422 (734)
.+.-..|+..|.|...|++ ..-|=++|-|.|.+..|..-+ -.+|--.||-.
T Consensus 194 --------------~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPenDrNl---------Y~C~~~PRH~s----- 245 (372)
T KOG3916|consen 194 --------------NKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDRNL---------YGCPEQPRHMS----- 245 (372)
T ss_pred --------------CCcccHHHhhhhHHHHHHHhcCCCEEEEecccccccCCCCc---------cCCCCCCcchh-----
Confidence 1122356788888888877 778999999999998742221 22332222210
Q ss_pred cccccCCccccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhccc-ccccccCCCchhHHHHHHHHHcCeeEEE
Q psy14856 423 WGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNI-KTIYTLNSMDYDMAFCTNLRNKGIHLKI 501 (734)
Q Consensus 423 Wgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~-~~~f~~~~~deDm~Fc~~ar~~Gi~myv 501 (734)
.|++.-||-..+..|. +++.-+.++-+++-++ +..|+.|. +||=++.-|.+.+|+++-=
T Consensus 246 -va~dk~gy~LPY~~~F------------------GGVsalt~~qf~kINGFsN~fWGWG-GEDDDl~nRv~~ag~~IsR 305 (372)
T KOG3916|consen 246 -VALDKFGYRLPYKEYF------------------GGVSALTKEQFRKINGFSNAFWGWG-GEDDDLWNRVQLAGMKISR 305 (372)
T ss_pred -hhhhhccccccchhhh------------------CchhhccHHHHHHhcCCCchhcccC-CcchHHHHHHHhcCceeec
Confidence 1233335544444441 1223344444554111 14555443 4555677888888877655
Q ss_pred eccc
Q psy14856 502 DSTQ 505 (734)
Q Consensus 502 ~N~~ 505 (734)
-|..
T Consensus 306 p~~~ 309 (372)
T KOG3916|consen 306 PPPE 309 (372)
T ss_pred CCCc
Confidence 5533
No 116
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=82.75 E-value=7.9 Score=42.93 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=68.1
Q ss_pred CcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCC----CC---cHHHHHHHHHHhccCcceEEEEeCCCC--
Q psy14856 291 PSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQ----EY---HAPLFDDYIHNFKTMFKNVKYIAHNST-- 360 (734)
Q Consensus 291 P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~----D~---t~~il~~f~~~~~~~y~~V~ii~~~~~-- 360 (734)
-...|+||+.|| -+.|+-.|..| |.+-..|+|.||. |. -.+.+++|-.-.. ..+-++...+.
T Consensus 51 ~~mAIVVP~KdE~l~lleGVL~gI-----Ph~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~---r~~i~vHQkDp~l 122 (393)
T PRK14503 51 GRMAIVVPVKNERLKLLEGVLKGI-----PHECPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQ---RPIIIVHQKDPGL 122 (393)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCCchHHHHHHHHHHHHHhhhc---CceEEEEcCCHHH
Confidence 468999999998 45566677665 7777766666653 22 1345555553221 23334432221
Q ss_pred --------------------CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 361 --------------------VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 361 --------------------~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
-|++++.=.|+-.|+....+|+=|+|||+.+ |.+..+-++
T Consensus 123 a~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyi--PGaV~EYvk 182 (393)
T PRK14503 123 AEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYI--PGAVNEYVK 182 (393)
T ss_pred HHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCC--CchHHHHHH
Confidence 2567788888888877899999999999999 677766664
No 117
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=82.57 E-value=14 Score=37.64 Aligned_cols=100 Identities=16% Similarity=0.346 Sum_probs=63.3
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC--CCcHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS--TVNSKEAR 367 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~--~~g~a~ar 367 (734)
.|+-++-+ ...+.|+..++++.+..-. ++.+.+ . +..+.+++++.+. ..+.++..++ ..|.+.+-
T Consensus 19 ~pK~l~~~---~g~~li~~~l~~l~~~gi~--~i~vv~-~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~s~ 85 (229)
T cd02523 19 RPKCLLEI---NGKPLLERQIETLKEAGID--DIVIVT-G---YKKEQIEELLKKY----PNIKFVYNPDYAETNNIYSL 85 (229)
T ss_pred CCceeeeE---CCEEHHHHHHHHHHHCCCc--eEEEEe-c---cCHHHHHHHHhcc----CCeEEEeCcchhhhCcHHHH
Confidence 45555544 2359999999999987433 443333 2 2345556655432 3566665443 34545555
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCce
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESL 407 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~I 407 (734)
..|++.. .++++++.+|++++ +++++.+++.+..+
T Consensus 86 ~~~~~~~----~~~~lv~~~D~~~~-~~~~~~~~~~~~~~ 120 (229)
T cd02523 86 YLARDFL----DEDFLLLEGDVVFD-PSILERLLSSPADN 120 (229)
T ss_pred HHHHHHc----CCCEEEEeCCEecC-HHHHHHHHcCCCCC
Confidence 5555443 58899999999985 99999998765543
No 118
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=82.55 E-value=8.4 Score=36.87 Aligned_cols=97 Identities=12% Similarity=0.272 Sum_probs=65.1
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|+..++.+.+... ++| +|..+. +.+.+...+. .++++... ...|...+--.|+..+. ++
T Consensus 22 ~g~~li~~~l~~l~~~~~--~~I--vvv~~~----~~~~~~~~~~-----~~~~v~~~~~~~G~~~sl~~a~~~~~--~~ 86 (160)
T PF12804_consen 22 GGKPLIERVLEALREAGV--DDI--VVVTGE----EEIYEYLERY-----GIKVVVDPEPGQGPLASLLAALSQLP--SS 86 (160)
T ss_dssp TTEEHHHHHHHHHHHHTE--SEE--EEEEST----HHHHHHHTTT-----TSEEEE-STSSCSHHHHHHHHHHTST--TS
T ss_pred CCccHHHHHHHHhhccCC--ceE--EEecCh----HHHHHHHhcc-----CceEEEeccccCChHHHHHHHHHhcc--cC
Confidence 668999999999999863 333 343322 2233333222 46666554 45777877777876643 79
Q ss_pred cEEEEECCCccCCChHHHHHHHHc----CCceeeecc
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL 412 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l 412 (734)
++++++.+|..+-++++++.|++. +.+++.+..
T Consensus 87 ~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~~ 123 (160)
T PF12804_consen 87 EPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPVF 123 (160)
T ss_dssp SEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEEE
Confidence 999999999955349999999975 566776655
No 119
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=82.36 E-value=3.1 Score=47.36 Aligned_cols=108 Identities=20% Similarity=0.327 Sum_probs=53.7
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC----------
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN---------- 358 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~---------- 358 (734)
..|.+-|+|+++|....+.++|++|++..=.+.+..|+|. +|...+.+.+-++.++.. ++.+...
T Consensus 91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVS--QDg~~~~~~~vi~~y~~~---v~~i~~~~~~~i~~~~~ 165 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVS--QDGDDEEVAEVIKSYGDQ---VTYIQHPDFSPITIPPK 165 (434)
T ss_dssp ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEE--E-TT-HHHHHHHHGGGGG---SEEEE-S--S-----TT
T ss_pred CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEE--ecCCcHHHHHHHHHhhhh---heeeecCCcCCceeCcc
Confidence 4578899999999999999999999997632344444442 233333333334444322 2222211
Q ss_pred CCCcH---HHHHH--HHHHhhhh-cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 359 STVNS---KEARN--LAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 359 ~~~g~---a~arN--~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
+.... .-||. .||...-. ...+.++++.-|..+. ||.++..-+
T Consensus 166 ~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~is-PDFf~Yf~~ 214 (434)
T PF03071_consen 166 EKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEIS-PDFFEYFSA 214 (434)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE--TTHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccC-ccHHHHHHH
Confidence 10000 11222 24544422 4689999999999998 998877654
No 120
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=81.86 E-value=8.9 Score=42.30 Aligned_cols=102 Identities=19% Similarity=0.255 Sum_probs=67.9
Q ss_pred CcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCCC----C---cHHHHHHHHHHhccCcceEEEEeCCCC--
Q psy14856 291 PSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQE----Y---HAPLFDDYIHNFKTMFKNVKYIAHNST-- 360 (734)
Q Consensus 291 P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D----~---t~~il~~f~~~~~~~y~~V~ii~~~~~-- 360 (734)
-...|+||+.|| -+.|+-.|..| |.+-..|+|.||.- . -.+.+++|-.-.. ..+-++...+.
T Consensus 50 ~~maIVVP~KdE~l~lleGVL~gI-----Ph~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~---r~~i~vHQkDp~l 121 (381)
T TIGR02460 50 GKTAIVVPVKNEKLHLLEGVLSGI-----PHECPIIIVSNSKREPPDRFKMEVDLIRHFSNLTH---RKIIIIHQKDPAL 121 (381)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCChhHHHHHHHHHHHHHHhhc---CceEEEEcCCHHH
Confidence 468999999998 45566676665 77777666667532 2 1345555553221 23333332221
Q ss_pred --------------------CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 361 --------------------VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 361 --------------------~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
-|++++.=.|+-.|+....+|+=|+|||+.+ |.+..+-+.
T Consensus 122 a~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyi--PGaV~EYvk 181 (381)
T TIGR02460 122 AEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYF--PGAVNEYVK 181 (381)
T ss_pred HHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCC--CchHHHHHH
Confidence 2567888888888877899999999999999 677766664
No 121
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=81.29 E-value=14 Score=40.80 Aligned_cols=155 Identities=16% Similarity=0.150 Sum_probs=81.7
Q ss_pred CcEEEEEeecCCC-chHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhc-CCCCCeEEEEEeccc
Q psy14856 32 DKFLVITVASNET-DGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEM-DITDDMIILVTDSYD 109 (734)
Q Consensus 32 ~~l~vltvat~~~-~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~-~~~~D~lvl~vDsyD 109 (734)
=.+||++ ..-+ +...++.+.+..++..+.+.=...++-.+- .......+..-.|=.+.++ +++-| =||..|+ |
T Consensus 56 ~~f~Il~--~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~-~~~~~~s~atY~Rl~ip~llp~~~d-kvLYLD~-D 130 (334)
T PRK15171 56 LVFHVFT--DYISDADKQRFSALAKQYNTRINIYLINCERLKSL-PSTKNWTYATYFRFIIADYFIDKTD-KVLYLDA-D 130 (334)
T ss_pred EEEEEEe--CCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCC-cccCcCCHHHHHHHHHHHhhhhhcC-EEEEeeC-C
Confidence 3566665 3344 444555566777777777554443333211 1112334444444334332 22234 6899999 9
Q ss_pred eeEeCCHHHHHHHHhcCCCcEEEccCCcc----cCCCcCcccCCCCCCCCcccccceeeeeHHHHHHH------HHhcc-
Q psy14856 110 VIIDGGVNDILERFNTFDANIVFGAERLC----WPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKEL------ISNRS- 178 (734)
Q Consensus 110 v~f~~~~~~ll~rf~~~~~~ilfsae~~c----wP~~~l~~~yP~~~~g~R~LNSG~~iG~a~~l~~l------~~~~~- 178 (734)
++++.+.++|.+- +++...+.++-..+ |-.....-..|. .+..|.|||-++=-....++. ++...
T Consensus 131 iiv~~dl~~L~~~--dl~~~~~aav~~d~~~~~~~~~~~~l~~~~--~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~ 206 (334)
T PRK15171 131 IACKGSIKELIDL--DFAENEIAAVVAEGDAEWWSKRAQSLQTPG--LASGYFNSGFLLINIPAWAQENISAKAIEMLAD 206 (334)
T ss_pred EEecCCHHHHHhc--cCCCCeEEEEEeccchhHHHHHHHhcCCcc--ccccceecceEEEcHHHHHHhhHHHHHHHHHhc
Confidence 9999999998844 45534444442111 111100111222 234699999998777766543 22111
Q ss_pred ----CCCCCChhHHHHHhhhc
Q psy14856 179 ----IKNEEDDQLYYALLFLD 195 (734)
Q Consensus 179 ----~~d~~dDQl~~t~i~l~ 195 (734)
..-..-||-.+..++-+
T Consensus 207 ~~~~~~~~~~DQDiLN~~~~~ 227 (334)
T PRK15171 207 PEIVSRITHLDQDVLNILLAG 227 (334)
T ss_pred cccccceeecChhHHHHHHcC
Confidence 11234699888877644
No 122
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=80.57 E-value=18 Score=37.53 Aligned_cols=160 Identities=16% Similarity=0.259 Sum_probs=86.2
Q ss_pred CCCCCceecCCCCChHHHHHHHHHHHHh---CCCCC-----CCCCCcccC-----------CCcc--cc-cccCeeeecc
Q psy14856 555 NQPCPDVFWFPIVTEKFCHEFVQIMEAY---GQWSD-----GTNNDKRLE-----------TGYE--AV-PTRDIHMKQV 612 (734)
Q Consensus 555 ~~~~p~Vy~fpv~s~~fC~~Li~e~E~~---g~ws~-----~~~~~~r~~-----------g~~~--~v-pt~di~~~~~ 612 (734)
++-.|+++.+|=|..+.+++|++++.+. ..|.. |..--.|+. .+|. .. |..+.++..+
T Consensus 14 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~ 93 (213)
T PRK15401 14 EPLAPGAVLLRGFALAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAM 93 (213)
T ss_pred eecCCCcEEeCCCCHHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCc
Confidence 4568899999999999999999999983 33321 110000000 1110 00 1111222221
Q ss_pred chHHHHHHHHHHhhchhhhhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccCCc--e---EEEEEecCCCCcCCCccE
Q psy14856 613 GLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSST--Y---TINIALNQVGVDYEGGGC 687 (734)
Q Consensus 613 g~~~~~~~~l~~~v~P~~~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S~--~---T~ni~Ln~~~~dfeGGg~ 687 (734)
..++..|.+.+.- ..-|+ ....+-..|-+|.++. .+++|.|..+ + -++|.|+..- .|.=|+.
T Consensus 94 ---P~~l~~L~~~~~~--~~~~~-----~~~p~a~LvN~Y~~G~--~mg~H~D~~E~~~~~pI~SvSLG~~~-~F~~~~~ 160 (213)
T PRK15401 94 ---PASFLALAQRAAA--AAGFP-----GFQPDACLINRYAPGA--KLSLHQDKDERDFRAPIVSVSLGLPA-VFQFGGL 160 (213)
T ss_pred ---hHHHHHHHHHHHH--HcCCC-----CCCCCEEEEEeccCcC--ccccccCCCcccCCCCEEEEeCCCCe-EEEeccc
Confidence 1233334444321 11111 1134568899999886 8999999643 2 2566666532 3432211
Q ss_pred EEeecc-ceeecccceeEEEeCCCc-ccccCcccCCce-------eEEEEE
Q psy14856 688 RFIRYN-CNVTATRMGWMLMHPGRL-THYHEGLQVTQG-------TRYIMI 729 (734)
Q Consensus 688 ~F~~~~-~~v~~~~~G~al~h~g~l-th~H~g~~vT~G-------~Ryilv 729 (734)
. +.+ ..-...+-|..||..|.- .++|+-.++.+| .|.||.
T Consensus 161 ~--~~~~~~~l~L~~Gdllvm~G~sr~~~HgVp~~~~~~~p~~g~~RINLT 209 (213)
T PRK15401 161 K--RSDPLQRILLEHGDVVVWGGPSRLRYHGILPLKAGEHPLTGECRINLT 209 (213)
T ss_pred C--CCCceEEEEeCCCCEEEECchHhheeccCCcCCCCcCCCCCCCeEEEE
Confidence 1 111 112347889999987642 157888888765 588874
No 123
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=80.11 E-value=40 Score=37.52 Aligned_cols=212 Identities=12% Similarity=0.126 Sum_probs=118.2
Q ss_pred cEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec---CCCCcH-----------------HHHHHHHHH-------
Q psy14856 292 SVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN---NQEYHA-----------------PLFDDYIHN------- 344 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n---s~D~t~-----------------~il~~f~~~------- 344 (734)
+|+|+|..|--. -...+|.++.+.---.++|.+=|.. ..|... +....+...
T Consensus 1 tIFvsiasyRD~-~c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
T PF11397_consen 1 TIFVSIASYRDP-ECAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWP 79 (343)
T ss_pred CEEEEEeeecCc-hHHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhcccccccc
Confidence 477888887653 4667777766654444787765553 222221 112333332
Q ss_pred -hc--cCcceEEEEe--CCCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc------CCceeeecc-
Q psy14856 345 -FK--TMFKNVKYIA--HNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR------NESLIAPLL- 412 (734)
Q Consensus 345 -~~--~~y~~V~ii~--~~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~------nk~IVaP~l- 412 (734)
.. ..-..|+++. ..+..|..-||.++..+- .+-+|++-+||-+.+. +++=..||++ .+.|++--.
T Consensus 80 ~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~--~gE~y~LqiDSH~rF~-~~WD~~li~~~~~~~~~~aVLS~YP~ 156 (343)
T PF11397_consen 80 DGALCLRSDQIRVIRVDASEARGPCWARYLAQKLY--RGEDYYLQIDSHMRFV-PGWDEILIEMLKSLRNPKAVLSTYPP 156 (343)
T ss_pred cccccccCCeEEEEEeCHHHCcChHHHHHHHHHHh--CCCeEEEEEeccceee-ccHHHHHHHHHHhcCCCCeEEecCCC
Confidence 00 0112455543 445678889999998765 3679999999999998 8877777753 455555211
Q ss_pred -cCC---Cccccccc----cc--ccCCccccchHH-HHHHHhc-ccCCcceeeeceeeeEEeeehhhHhhcccc--cccc
Q psy14856 413 -VRP---FKAWSNFW----GA--LNADGFYARSFD-YMNIING-DQGGKGIWNVPYITNCYLMKTSVIKATNIK--TIYT 478 (734)
Q Consensus 413 -~~~---~~~wsNFW----ga--l~~~GyY~Rsed-y~~i~~~-~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~--~~f~ 478 (734)
... ...+..=. |. ..++|. -|... .+..... .. + -.-|++++.++..+.-+.. ++. +...
T Consensus 157 ~~~~~~~~~~~~~~~~~~lc~~~~~~~g~-~~~~~~~~~~~~~~~~--P--~~~~f~aaGF~Fa~~~~~~-eVP~DP~lp 230 (343)
T PF11397_consen 157 GYEPDGGQPEPEKTTVPRLCAARFGPDGM-VRLGARWIKPAPKLEE--P--VPQPFWAAGFSFAPGHFVR-EVPYDPHLP 230 (343)
T ss_pred CcccccCCccccCCcccEEEEeEECCCCc-EeecceecccccccCC--C--eeeceecccEEEcchhhee-cCCCCCCcc
Confidence 111 00000000 00 122232 11111 0000000 00 1 2357888888874433433 344 2222
Q ss_pred cCCCchhHHHHHHHHHcCeeEEEecccceEEeecc
Q psy14856 479 LNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDS 513 (734)
Q Consensus 479 ~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~ 513 (734)
....+|.+.++.|+=-+|+.+|.-++...-|.-+.
T Consensus 231 ~lF~GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r 265 (343)
T PF11397_consen 231 FLFDGEEISMAARLWTHGYDFYSPTRNVLFHLYSR 265 (343)
T ss_pred cccccHHHHHHHHHHHcCCccccCCCceeEEEccC
Confidence 24579999999999999999999999888887544
No 124
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=79.59 E-value=4.9 Score=43.65 Aligned_cols=83 Identities=18% Similarity=0.119 Sum_probs=56.6
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeec---cceeecccceeEEEeCCCcc------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRY---NCNVTATRMGWMLMHPGRLT------ 712 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~---~~~v~~~~~G~al~h~g~lt------ 712 (734)
...+.+|-| +.+..+++|+|.+.+|+... + =+.||+..... .-.-+.|.+|..||.-|.+-
T Consensus 150 ~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~q--d----~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG 223 (300)
T PLN02365 150 QFRINKYNFTPETVGSSGVQIHTDSGFLTILQD--D----ENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNG 223 (300)
T ss_pred ceeeeecCCCCCccccccccCccCCCceEEEec--C----CCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCC
Confidence 456777733 34567899999999998743 2 13567777542 12234688999999877431
Q ss_pred ----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|....-....||-+..|++|
T Consensus 224 ~~~St~HRVv~~~~~~R~Si~~F~~p 249 (300)
T PLN02365 224 RLCNVKHRVQCKEATMRISIASFLLG 249 (300)
T ss_pred ceecccceeEcCCCCCEEEEEEEecC
Confidence 1587765445679999999887
No 125
>PLN02904 oxidoreductase
Probab=79.47 E-value=12 Score=41.81 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=57.2
Q ss_pred cceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc--ceeecccceeEEEeCCCcc------
Q psy14856 645 PMSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN--CNVTATRMGWMLMHPGRLT------ 712 (734)
Q Consensus 645 ~~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--~~v~~~~~G~al~h~g~lt------ 712 (734)
...++.+|-| +.+-.+.+|+|.+.+|+... + +||+.....+ =.-+.|.+|..||.-|.+-
T Consensus 208 ~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~q--d------~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG 279 (357)
T PLN02904 208 QVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQ--S------SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNG 279 (357)
T ss_pred cEEEeeecCCCCCcccccCCcCccCCCceEEEec--C------CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCC
Confidence 3456778854 24556889999999999862 2 2578775421 1224588999999887421
Q ss_pred ----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|++..-....||-+..|++|
T Consensus 280 ~~kSt~HRVv~~~~~~R~Si~~F~~p 305 (357)
T PLN02904 280 IYKSVVHRVTVNKDYKRLSFASLHSL 305 (357)
T ss_pred eeeccCCcccCCCCCCEEEEEEeecC
Confidence 2688875556789999999987
No 126
>KOG2571|consensus
Probab=78.91 E-value=24 Score=43.55 Aligned_cols=112 Identities=25% Similarity=0.370 Sum_probs=62.5
Q ss_pred hcCccEEEEECCCccCCChHHHHHHHHc---CCceeee---cccCCCcccccccccccCCccccchHHHHHH-----Hhc
Q psy14856 376 HKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESLIAP---LLVRPFKAWSNFWGALNADGFYARSFDYMNI-----ING 444 (734)
Q Consensus 376 ~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP---~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i-----~~~ 444 (734)
...-|||+++|||+.+. |++|.+|++. |..|.+. +....++ | + -.|.+=|-++.. .++
T Consensus 438 ~~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~VggaCG~I~~~~~~-w------~---v~~Q~FEY~Ish~l~Ka~ES 506 (862)
T KOG2571|consen 438 MPSVDYILVVDADTRLD-PDALYHLVKVFDEDPQVGGACGRILNKGGS-W------V---VAYQNFEYAISHNLQKATES 506 (862)
T ss_pred cCcceEEEEecCCCccC-cHHHHHHHHHhccCcccceeccccccCCCc-e------E---EeHHHHHHHHHHHHHHhhhh
Confidence 36678999999999997 9999999973 4444432 2222222 1 0 012222222222 222
Q ss_pred ccCCcceeeeceeeeEE-eeehhhHhhcccc----ccc------ccCCCchhHHHHHHHHHcCeeEEEec
Q psy14856 445 DQGGKGIWNVPYITNCY-LMKTSVIKATNIK----TIY------TLNSMDYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 445 ~~~~~G~~nVP~v~~~~-LI~~~vL~~~~~~----~~f------~~~~~deDm~Fc~~ar~~Gi~myv~N 503 (734)
- -|+.- .+.+|+ |-|-++|....+. +.+ ....+.||..+|.++-++|+.+-++-
T Consensus 507 v---FG~Vs--clPGcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a 571 (862)
T KOG2571|consen 507 V---FGCVS--CLPGCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVA 571 (862)
T ss_pred h---ceeEE--ecCchhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeec
Confidence 1 23211 111233 4455455431111 111 13458999999999999999997775
No 127
>PLN02189 cellulose synthase
Probab=77.78 E-value=4.8 Score=50.15 Aligned_cols=72 Identities=13% Similarity=0.259 Sum_probs=56.9
Q ss_pred CCCCcHHHHHHHHHHh------ccCcceEEEEeCCCCCc-----HHHHHHHHHHh-hhhcCccEEEEECCCccCCChHHH
Q psy14856 330 NQEYHAPLFDDYIHNF------KTMFKNVKYIAHNSTVN-----SKEARNLAVEN-SLHKGVDFYFYVDSDSHLDNPDVL 397 (734)
Q Consensus 330 s~D~t~~il~~f~~~~------~~~y~~V~ii~~~~~~g-----~a~arN~al~~-a~~~~~DYlf~vDAD~~L~np~tL 397 (734)
+..+|..+++-+++.. +...+.+.+|..+++.+ ||.|.|.++.. |...+++|++.+|+|.+..||++|
T Consensus 472 ~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~al 551 (1040)
T PLN02189 472 NTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAV 551 (1040)
T ss_pred CCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHH
Confidence 4567888998877642 23456688888887765 68899998864 344899999999999999999999
Q ss_pred HHHH
Q psy14856 398 KYLV 401 (734)
Q Consensus 398 ~~LI 401 (734)
++-+
T Consensus 552 r~AM 555 (1040)
T PLN02189 552 REAM 555 (1040)
T ss_pred HHhh
Confidence 9877
No 128
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=77.72 E-value=16 Score=41.55 Aligned_cols=90 Identities=12% Similarity=0.208 Sum_probs=58.4
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|+..+++|.+.. -+++.+.+ . +..+.+++++.. ..++++..+...|-+.+-..|++...+...|+
T Consensus 32 gkpli~~~l~~l~~~~--~~~iivv~-~---~~~~~i~~~~~~-----~~~~~v~~~~~~Gt~~al~~a~~~l~~~~~d~ 100 (456)
T PRK14356 32 GEPMLRFVYRALRPLF--GDNVWTVV-G---HRADMVRAAFPD-----EDARFVLQEQQLGTGHALQCAWPSLTAAGLDR 100 (456)
T ss_pred CCcHHHHHHHHHHhcC--CCcEEEEE-C---CCHHHHHHhccc-----cCceEEEcCCCCCcHHHHHHHHHHHhhcCCCc
Confidence 4799999999998753 23443322 1 223445554432 13555655555566666666665543345799
Q ss_pred EEEECCCc-cCCChHHHHHHHHc
Q psy14856 382 YFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~-~L~np~tL~~LI~~ 403 (734)
++++++|. +++ ++.++.|++.
T Consensus 101 vlv~~gD~P~i~-~~~i~~li~~ 122 (456)
T PRK14356 101 VLVVNGDTPLVT-TDTIDDFLKE 122 (456)
T ss_pred EEEEeCCcccCC-HHHHHHHHHH
Confidence 99999999 565 9999999975
No 129
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=77.21 E-value=16 Score=39.84 Aligned_cols=110 Identities=13% Similarity=0.273 Sum_probs=69.9
Q ss_pred CcEEEEEEe--cCChhHHHHHHHHHHcccCCCce--EE--EEEec-CCCCcHHHHHHHHHHhccCcc--eEEEEeCCCC-
Q psy14856 291 PSVLISVFI--DKPTAFLEEFLNKIANLNYPAKK--IS--MFVYN-NQEYHAPLFDDYIHNFKTMFK--NVKYIAHNST- 360 (734)
Q Consensus 291 P~V~I~I~i--~n~~~~L~~fL~sL~~LdYPk~r--i~--l~I~n-s~D~t~~il~~f~~~~~~~y~--~V~ii~~~~~- 360 (734)
+++.|+||- |..+.+|...|+||..---|.++ +. |+|.+ +.+.+...+++|..+....-. .+.+|.+...
T Consensus 52 ~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI~~p~~~ 131 (297)
T PF04666_consen 52 KKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVISPPPSY 131 (297)
T ss_pred CeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEEeccccc
Confidence 458888887 66789999999999987777654 33 44444 445566666666654433211 3455554322
Q ss_pred ----------Cc------HHHHHH-----HHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 361 ----------VN------SKEARN-----LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 361 ----------~g------~a~arN-----~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.+ ...-|+ ..|++|. ..++|++.+.=|++.. |+.+..+.+
T Consensus 132 Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~~-~~~~YyL~LEDDVia~-~~f~~~i~~ 192 (297)
T PF04666_consen 132 YPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYCQ-NLGDYYLQLEDDVIAA-PGFLSRIKR 192 (297)
T ss_pred CCChhhhhhcccChhhhhhHHHhhcccHHHHHHHHH-hcCCeEEEecCCeEec-hhHHHHHHH
Confidence 01 111121 3566775 4789999998888876 988877764
No 130
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=76.90 E-value=6.7 Score=41.83 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=56.0
Q ss_pred eeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc-eeecccceeEEEeCCCcc---------
Q psy14856 647 SFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC-NVTATRMGWMLMHPGRLT--------- 712 (734)
Q Consensus 647 ~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~-~v~~~~~G~al~h~g~lt--------- 712 (734)
..+.+|-|- .+-.+++|+|.+.+|+... + +.||+.....+. .-+.|.+|..||.-|.+-
T Consensus 118 lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q--d-----~v~GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~ 190 (262)
T PLN03001 118 ITVSYYPPCPQPELTLGLQSHSDFGAITLLIQ--D-----DVEGLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYK 190 (262)
T ss_pred heeecCCCCCCcccccCCcCCcCCCeeEEEEe--C-----CCCceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccc
Confidence 466677543 4556889999999999643 3 245677643221 124588999999888631
Q ss_pred -cccCcccCCceeEEEEEeeeCC
Q psy14856 713 -HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 -h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-.|.+.......||-+..|+.|
T Consensus 191 S~~HRVv~~~~~~R~Sia~F~~p 213 (262)
T PLN03001 191 SAQHRAIANANKARLSVATFHDP 213 (262)
T ss_pred cccceEEcCCCCCEEEEEEEEcC
Confidence 1488876656779999999987
No 131
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=76.63 E-value=24 Score=35.70 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+.. -.++.+.+ +.+ .+.+.+++.+ ..++++..++..|.+.+-..|++... .+.|++
T Consensus 26 kpli~~~i~~l~~~~--i~~i~iv~--~~~--~~~i~~~~~~-----~~~~~~~~~~~~g~~~ai~~a~~~~~-~~~~~v 93 (229)
T cd02540 26 KPMLEHVLDAARALG--PDRIVVVV--GHG--AEQVKKALAN-----PNVEFVLQEEQLGTGHAVKQALPALK-DFEGDV 93 (229)
T ss_pred ccHHHHHHHHHHhCC--CCeEEEEE--CCC--HHHHHHHhCC-----CCcEEEECCCCCCCHHHHHHHHHhhc-cCCCeE
Confidence 599999999998854 23444433 222 3445555543 24566665655666666666666542 136899
Q ss_pred EEECCCccCCChHHHHHHHH
Q psy14856 383 FYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~ 402 (734)
+++++|.-+-+++.++.|++
T Consensus 94 li~~~D~p~~~~~~i~~l~~ 113 (229)
T cd02540 94 LVLYGDVPLITPETLQRLLE 113 (229)
T ss_pred EEEeCCccccCHHHHHHHHH
Confidence 99999994334899999986
No 132
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=76.39 E-value=15 Score=40.81 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=63.1
Q ss_pred CCcEEEEEeecCCCchHHHHHHHHHHcCCc-ceee-ccCcc----------cCCC--C--------CCCCCccchHHHHH
Q psy14856 31 EDKFLVITVASNETDGYKRFIQSAEVNKLQ-VKTL-GLHQP----------WLGG--D--------MSSLGGGYKVNLLK 88 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~~r~~~Sa~~~~y~-~~vl-g~g~~----------W~gg--~--------~~~~ggg~Ki~~l~ 88 (734)
.+.+-|+.|+-.+.+.+.+.++|.....|| .+|+ +-+.. .... + ....|...|...+.
T Consensus 40 ~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~~l~ 119 (373)
T TIGR03472 40 WPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVSNLI 119 (373)
T ss_pred CCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHHHHH
Confidence 467999999999999999999999999987 4543 21110 0000 0 01124456888887
Q ss_pred HHHhhcCCCCCeEEEEEeccceeEeCC-HHHHHHHHhcCCCcEEEc
Q psy14856 89 NELDEMDITDDMIILVTDSYDVIIDGG-VNDILERFNTFDANIVFG 133 (734)
Q Consensus 89 ~~L~~~~~~~D~lvl~vDsyDv~f~~~-~~~ll~rf~~~~~~ilfs 133 (734)
..++.-+ .| +|+|+|| |++.... .++++..|.+.+..+|.+
T Consensus 120 ~~~~~a~--ge-~i~~~Da-D~~~~p~~L~~lv~~~~~~~v~~V~~ 161 (373)
T TIGR03472 120 NMLPHAR--HD-ILVIADS-DISVGPDYLRQVVAPLADPDVGLVTC 161 (373)
T ss_pred HHHHhcc--CC-EEEEECC-CCCcChhHHHHHHHHhcCCCcceEec
Confidence 7665432 34 9999999 5554222 277777776555555544
No 133
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=75.78 E-value=11 Score=41.46 Aligned_cols=98 Identities=17% Similarity=0.332 Sum_probs=54.3
Q ss_pred CcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc--H-HHH
Q psy14856 291 PSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN--S-KEA 366 (734)
Q Consensus 291 P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g--~-a~a 366 (734)
-+|.|.++|--. ..|++.|++|-++-=-|..+++.+|-.........++ .+ .-..++++.-.+..+ . .-.
T Consensus 99 ~tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~-----l~-~~r~~~V~~v~~~~~Wqd~sm~ 172 (337)
T PF03414_consen 99 ITIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIE-----LG-PGRRLKVFEVQEEKRWQDISMM 172 (337)
T ss_dssp -EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------------TTEEEEEEE-SGGSSHHHHHHH
T ss_pred ceEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccc-----cC-CCceeEEEEecccCCCccchhH
Confidence 467777777444 6699999999999888888888666541111111111 11 124677776443333 1 111
Q ss_pred HHHH----HHhhhhcCccEEEEECCCccCCCh
Q psy14856 367 RNLA----VENSLHKGVDFYFYVDSDSHLDNP 394 (734)
Q Consensus 367 rN~a----l~~a~~~~~DYlf~vDAD~~L~np 394 (734)
|=.. ++.-.....||+|++|+|..+.++
T Consensus 173 Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~ 204 (337)
T PF03414_consen 173 RMEMISEHIEQHIQHEVDYLFCMDVDMVFQDH 204 (337)
T ss_dssp HHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEecceEEecc
Confidence 1111 222223579999999999999854
No 134
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=75.71 E-value=17 Score=39.79 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=64.5
Q ss_pred cEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccC----cceEEEEeCCCCC--cHH
Q psy14856 292 SVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTM----FKNVKYIAHNSTV--NSK 364 (734)
Q Consensus 292 ~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~----y~~V~ii~~~~~~--g~a 364 (734)
-++-.|-|.||+.+|+++|+|++-.= ++. ++..| ++|+|+|++.+|.++++.. |+--.++...+.. ...
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpai---~~g-VI~yNdc~D~t~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~l~ 163 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPAI---DEG-VIGYNDCTDGTEEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENSLY 163 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHHH---hcc-EEEeecCCCCHHHHHHHHHHhCcccccccCcchhhccCCchhhhhhh
Confidence 46777889999999999999998421 233 33345 8999999999999988752 2210111111110 112
Q ss_pred HHHHHHHHhhhhcCccEEEEECCCccCCChHHHHH
Q psy14856 365 EARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKY 399 (734)
Q Consensus 365 ~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~ 399 (734)
.--|.++..- .+.+|+.=+|+|-+.. ++-|-.
T Consensus 164 ~YYNy~ls~i--pk~~w~iKID~DhIy~-~~KL~k 195 (347)
T PF06306_consen 164 NYYNYVLSFI--PKNEWAIKIDADHIYD-TKKLYK 195 (347)
T ss_pred hhhhhhhccc--ccceEEEEeccceeec-HHHHhh
Confidence 2333343221 4689999999999997 665533
No 135
>PHA02866 Hypothetical protein; Provisional
Probab=75.24 E-value=23 Score=38.42 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=88.3
Q ss_pred CCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeeccch--HHHHHHHHHHhhchhhhhhhc
Q psy14856 558 CPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGL--AGVWAEFLRKYVVPLQEREFI 635 (734)
Q Consensus 558 ~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~--~~~~~~~l~~~v~P~~~~~f~ 635 (734)
..+|.....|.++|-.-.-+.+.--..|...+--..| .+|+...+.. -++..+ +.+.|+-+.+--++
T Consensus 5 ~~~~~~~~~f~~~f~~i~~~~~~m~~~w~~s~i~~~~----------~~i~~~~~~~~k~k~~~~-v~~~v~~~~~~~~~ 73 (333)
T PHA02866 5 TDGVLRLKSFRDDFKGIKEELKFMLNSWEDSDILRHR----------QFIPCEILVLEKSERTKQ-VFGAVKRVLASSLT 73 (333)
T ss_pred eCCeEEEEEhhhhhhhHHHHHHHHHhccchhhhhhhc----------cCCceeeeehhhhhhhHH-HHHHHHHHHhccCC
Confidence 3456667778888654433333344458765522122 2333333322 122322 22344433444444
Q ss_pred CCCCCCCCCcceeEEEEcCCCCCCCCcccc----C----CceEEEEEecCCCCcCCCccEEEeeccceeecccceeEEEe
Q psy14856 636 GYHHEPVRAPMSFVVRYRPDEQPSLRPHHD----S----STYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMH 707 (734)
Q Consensus 636 ~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D----~----S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G~al~h 707 (734)
.+.- -+ -.+.=+|+|..|. +|.-|+| + -++++.+.|+.|. +||.|.+.=.++++. ..-.=+||
T Consensus 74 ~~dv-~v-~~~~t~vk~~kg~--~fdn~~~~~~~~~~~~~~Y~LvLyL~~p~---~GGkt~iyv~~~t~i--~~~~DvLF 144 (333)
T PHA02866 74 DYDV-YV-CEHLTIVKCFKGV--GFDNRFSILTEDRHRGREYTLVLHLSSPK---NGGKTDVCVGDKTVI--STADDFLL 144 (333)
T ss_pred CccE-EE-eeeEEEEEEeccc--ccccceeEEEeccCCceEEEEEEEEeccc---cCCceEEEeCCCceE--eeccceee
Confidence 4311 11 2345568887654 3666665 2 3599999999954 999999985566554 34556788
Q ss_pred CCCcccccCcccCCceeEEEEE
Q psy14856 708 PGRLTHYHEGLQVTQGTRYIMI 729 (734)
Q Consensus 708 ~g~lth~H~g~~vT~G~Ryilv 729 (734)
.-+| -|+..-|.+|+++++.
T Consensus 145 DKsl--~h~S~~V~~G~K~Val 164 (333)
T PHA02866 145 EKRS--EQLSNVVQEGEKIVVA 164 (333)
T ss_pred eccc--cccceeeecCcEEEEE
Confidence 8887 6999999999998664
No 136
>PLN02276 gibberellin 20-oxidase
Probab=73.98 E-value=19 Score=40.26 Aligned_cols=82 Identities=21% Similarity=0.294 Sum_probs=57.5
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCc---------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRL--------- 711 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~l--------- 711 (734)
...+.+|-| +..-.+++|+|.+.+|+..- + +.||+.....+ =.-+.|.+|..||.-|.+
T Consensus 207 ~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q--d-----~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~ 279 (361)
T PLN02276 207 IMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQ--D-----QVGGLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRY 279 (361)
T ss_pred eeeeEeCCCCCCcccccCCccccCCceeEEEEe--c-----CCCceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCcc
Confidence 456677744 34456889999999998762 2 46677775321 112458899999987742
Q ss_pred -ccccCcccCCceeEEEEEeeeCC
Q psy14856 712 -THYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 712 -th~H~g~~vT~G~Ryilv~F~~p 734 (734)
--+|++..-....||-+..|++|
T Consensus 280 kSt~HRVv~~~~~~R~Sia~F~~P 303 (361)
T PLN02276 280 KSCLHRAVVNSERERRSLAFFLCP 303 (361)
T ss_pred ccccceeecCCCCCEEEEEEEecC
Confidence 12688876666789999999987
No 137
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=73.29 E-value=36 Score=33.74 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCc-HHHHHHHHHHhccCcceEEEEeCCC-CCcHHHHHHHHHHhhhhcC
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYH-APLFDDYIHNFKTMFKNVKYIAHNS-TVNSKEARNLAVENSLHKG 378 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t-~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a~arN~al~~a~~~~ 378 (734)
+..++|+..++.+.+..- ++ ++|..+.+.. .+.+.+... ....+.++...+ ..|...+-..|++.+....
T Consensus 24 ~g~~ll~~~i~~~~~~~~--~~--i~vv~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~G~~~si~~gl~~~~~~~ 95 (190)
T TIGR03202 24 GETTLGSASLKTALSSRL--SK--VIVVIGEKYAHLSWLDPYLL----ADERIMLVCCRDACEGQAHSLKCGLRKAEAMG 95 (190)
T ss_pred CCccHHHHHHHHHHhCCC--Cc--EEEEeCCccchhhhhhHhhh----cCCCeEEEECCChhhhHHHHHHHHHHHhccCC
Confidence 457899999887766432 23 3344322221 122221111 112455553332 2344555556666554346
Q ss_pred ccEEEEECCCccCCChHHHHHHHHc----CCceeeecc
Q psy14856 379 VDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL 412 (734)
Q Consensus 379 ~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l 412 (734)
+||+|++++|.=+-++++++.|++. ...++.|..
T Consensus 96 ~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~~~~~~~~~ 133 (190)
T TIGR03202 96 ADAVVILLADQPFLTADVINALLALAKRRPDDYVAASF 133 (190)
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHhhCCCCEEEEec
Confidence 8999999999966669999999974 224555544
No 138
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=73.20 E-value=8.9 Score=48.08 Aligned_cols=72 Identities=17% Similarity=0.260 Sum_probs=55.9
Q ss_pred CCCCcHHHHHHHHHHh------ccCcceEEEEeCCCCCc-----HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHH
Q psy14856 330 NQEYHAPLFDDYIHNF------KTMFKNVKYIAHNSTVN-----SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVL 397 (734)
Q Consensus 330 s~D~t~~il~~f~~~~------~~~y~~V~ii~~~~~~g-----~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL 397 (734)
+..+|..+++-+++.. +...+.+.++..+++.+ +|.|.|..+... ...+++|++.+|+|....||++|
T Consensus 490 ~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~al 569 (1079)
T PLN02638 490 NTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKAL 569 (1079)
T ss_pred CCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHH
Confidence 4456888888777432 22456677888887765 688999988643 44899999999999999999999
Q ss_pred HHHH
Q psy14856 398 KYLV 401 (734)
Q Consensus 398 ~~LI 401 (734)
++-+
T Consensus 570 r~AM 573 (1079)
T PLN02638 570 REAM 573 (1079)
T ss_pred HHhh
Confidence 9877
No 139
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=72.81 E-value=18 Score=43.58 Aligned_cols=102 Identities=14% Similarity=0.259 Sum_probs=68.2
Q ss_pred CcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCCC----C---cHHHHHHHHHHhccCcceEEEEeCCCC--
Q psy14856 291 PSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQE----Y---HAPLFDDYIHNFKTMFKNVKYIAHNST-- 360 (734)
Q Consensus 291 P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D----~---t~~il~~f~~~~~~~y~~V~ii~~~~~-- 360 (734)
-...|+||+.|| -+.|+-.|..| |.+-..|+|.||.- . -.+.+++|-.-.. ..+-++...+.
T Consensus 55 ~~~aivvp~k~e~~~~~~gvl~~i-----p~~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~---~~~~~vhq~dp~~ 126 (694)
T PRK14502 55 KKMAIVLPIKDEDLKVFEGVLSGI-----PHDCLMIVISNSSKQEVDNFKNEKDIVNRFCRITH---RQAIVVHQKNPEL 126 (694)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHHhhc---CceEEEEcCCHHH
Confidence 468999999998 45667777665 77777676767642 2 1344555543221 13333332221
Q ss_pred --------------------CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 361 --------------------VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 361 --------------------~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
-|++++.=.|+-.|+....+|+=|+|||+.+ |.+..+-++
T Consensus 127 a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~--pg~v~ey~~ 186 (694)
T PRK14502 127 ANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYI--PGAVWEYAK 186 (694)
T ss_pred HHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCC--CchHHHHHH
Confidence 2567888888888877899999999999999 666666664
No 140
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=72.49 E-value=23 Score=35.35 Aligned_cols=98 Identities=20% Similarity=0.335 Sum_probs=57.2
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+-++-+ -+ .+.|...++++.+..- .++.+.+ + ...+.+++++.+....-..+.++..++..|.+.+-..
T Consensus 19 ~pK~ll~v--~g-~pli~~~l~~l~~~g~--~~i~vv~-~---~~~~~i~~~~~~~~~~~~~i~~~~~~~~~g~~~al~~ 89 (217)
T cd04181 19 RPKPLLPI--AG-KPILEYIIERLARAGI--DEIILVV-G---YLGEQIEEYFGDGSKFGVNIEYVVQEEPLGTAGAVRN 89 (217)
T ss_pred CCccccEE--CC-eeHHHHHHHHHHHCCC--CEEEEEe-c---cCHHHHHHHHcChhhcCceEEEEeCCCCCccHHHHHH
Confidence 45555444 34 4999999999998763 3443333 2 2234455555432111124555555445565666556
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYL 400 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~L 400 (734)
|++.. ..++++++++|.+.+ .+..+.+
T Consensus 90 ~~~~~---~~~~~lv~~~D~~~~-~~~~~~~ 116 (217)
T cd04181 90 AEDFL---GDDDFLVVNGDVLTD-LDLSELL 116 (217)
T ss_pred hhhhc---CCCCEEEEECCeecC-cCHHHHH
Confidence 65543 578999999999875 6644433
No 141
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=71.99 E-value=32 Score=36.19 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 304 AFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 304 ~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
-|-..||.||.+|.=|+....|+++. ..+...+.|.+..+. ++.++++..+.. ....+...+++.++...+|++
T Consensus 42 lFe~~~LpSl~~QTd~dF~~lv~~~~~~P~~~~~rL~~l~~~----~p~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 116 (234)
T PF11316_consen 42 LFETYCLPSLRAQTDQDFTWLVLFDDDLPEPYRERLRDLLAD----YPQFRIVFRPPG-PHRDAMRRAINAARRDGADPV 116 (234)
T ss_pred HHHHHHhhHHHhccCCCeEEEEEECCCCCHHHHHHHHHHhcc----CCCcEEEecCCc-hHHHHHHHHHhhhccCCCCEE
Confidence 35567899999999999877665654 344445556655543 566777755433 345666667655555677877
Q ss_pred EEE--CCCccCCChHHHHHHHHc
Q psy14856 383 FYV--DSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~v--DAD~~L~np~tL~~LI~~ 403 (734)
+-+ |+|..+. .+.++.|-+.
T Consensus 117 ~~~RLDdDDAl~-~dFV~rlr~~ 138 (234)
T PF11316_consen 117 LQFRLDDDDALH-RDFVARLRRA 138 (234)
T ss_pred EEEEECCcchhh-HHHHHHHHHH
Confidence 665 9999998 9999988764
No 142
>PLN02195 cellulose synthase A
Probab=70.86 E-value=7.8 Score=48.07 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=55.0
Q ss_pred CCCCcHHHHHHHHHHhc------cCcceEEEEeCCCCCc-----HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHH
Q psy14856 330 NQEYHAPLFDDYIHNFK------TMFKNVKYIAHNSTVN-----SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVL 397 (734)
Q Consensus 330 s~D~t~~il~~f~~~~~------~~y~~V~ii~~~~~~g-----~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL 397 (734)
+..+|..+||=++...+ ...+.+.++..+++.+ +|.|.|.++... ...+++|++.+|+|.+..||++|
T Consensus 393 ~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~l 472 (977)
T PLN02195 393 NTRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAV 472 (977)
T ss_pred CCCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHH
Confidence 45577888887765432 2466777888777765 688888888643 34789999999999999988999
Q ss_pred HHHH
Q psy14856 398 KYLV 401 (734)
Q Consensus 398 ~~LI 401 (734)
++-+
T Consensus 473 r~AM 476 (977)
T PLN02195 473 REAM 476 (977)
T ss_pred HHHH
Confidence 9866
No 143
>PLN02947 oxidoreductase
Probab=70.46 E-value=13 Score=41.81 Aligned_cols=82 Identities=17% Similarity=0.149 Sum_probs=56.0
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCccc-------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLTH------- 713 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lth------- 713 (734)
...+.+|-|- ..-++.+|+|.+.+||..- + +.||+.....+ =.-+.|.+|..||.-|.+-.
T Consensus 226 ~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Q--d-----~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~ 298 (374)
T PLN02947 226 MMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQ--D-----EVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRY 298 (374)
T ss_pred eeeeecCCCCCCcccccCCCCccCCCceEEEEe--c-----CCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEE
Confidence 4455666543 3446789999999998764 2 34677764321 11245889999988886421
Q ss_pred ---ccCcccCCceeEEEEEeeeCC
Q psy14856 714 ---YHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 714 ---~H~g~~vT~G~Ryilv~F~~p 734 (734)
+|++..-..+.||-+..|++|
T Consensus 299 kS~~HRVv~~~~~~R~Sia~F~~P 322 (374)
T PLN02947 299 KSVLHRVRVNSTKPRISVASLHSL 322 (374)
T ss_pred eccccccccCCCCCEEEEEEEecC
Confidence 588865556789999999998
No 144
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=69.94 E-value=16 Score=40.53 Aligned_cols=82 Identities=24% Similarity=0.288 Sum_probs=56.8
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
...+.+|-|- .+-.+++|+|.+.+|+... + +.||+.....+ =.-+.|.+|..||.-|-+.
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Q--d-----~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~ 273 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQ--D-----EVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEY 273 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCCCceEEEEe--C-----CCCCeeEeeCCceEECCCCCCeEEEECChhhhhhcCCee
Confidence 5677788553 3456889999999999864 2 23567764211 1124588999999988642
Q ss_pred --cccCcc-cCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGL-QVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~-~vT~G~Ryilv~F~~p 734 (734)
-.|... +-....||-++.|++|
T Consensus 274 kSt~HRVv~~~~~~~R~Sia~F~~P 298 (341)
T PLN02984 274 KSVLHRVGKRNKKKERYSICYFVFP 298 (341)
T ss_pred eCCCCccccCCCCCCeEEEEEEecC
Confidence 148884 4445679999999988
No 145
>PHA02923 hypothetical protein; Provisional
Probab=68.88 E-value=14 Score=39.87 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=57.5
Q ss_pred ceeEEEEcCCCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccceeecccceeEEEeCCCcccccCcccCCceeE
Q psy14856 646 MSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTR 725 (734)
Q Consensus 646 ~~fvvrY~~~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G~al~h~g~lth~H~g~~vT~G~R 725 (734)
..=+++|+++..-.+ .| |.=.+.+.+.|+.|. +||.+.+...+-+ . ..-.=+||.-+| -|+..-|.+|++
T Consensus 68 ~iT~ikYekgd~~~l-~~-~~~~y~LvLyL~~p~---~GGt~i~~~~~t~-i--~~~~DvLFdKsl--~h~s~~V~~G~K 137 (315)
T PHA02923 68 TISFIKYNPFNDTTL-TD-DNMGYYLVIYLNRPK---SGKTLIYPTPETV-I--TSSEDIMFSKSL--NFRFENVKRGYK 137 (315)
T ss_pred eEEEEEEcCCCccee-ec-CceEEEEEEEEeccC---CCCeEEEecCCCe-E--eeccceeeeccc--ccceeeeecCcE
Confidence 445689999887445 33 667899999999964 7999998766633 2 344567888887 699999999999
Q ss_pred EEEEe
Q psy14856 726 YIMIS 730 (734)
Q Consensus 726 yilv~ 730 (734)
.|++.
T Consensus 138 ~VAl~ 142 (315)
T PHA02923 138 LVMCS 142 (315)
T ss_pred EEEEE
Confidence 98765
No 146
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=68.52 E-value=6.5 Score=40.11 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=50.5
Q ss_pred ceeEEEEcCCCC-----CCCCccccCCceEEEEEecCCCCcCCCccEEEeecc----ceeecccceeEEEeCCCcccccC
Q psy14856 646 MSFVVRYRPDEQ-----PSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN----CNVTATRMGWMLMHPGRLTHYHE 716 (734)
Q Consensus 646 ~~fvvrY~~~~~-----~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~----~~v~~~~~G~al~h~g~lth~H~ 716 (734)
..+.+|+.+..+ .-=+.|+|+..|++..+++..+ =+||.+.-.... ....-..+|.+++..-+- .+|+
T Consensus 97 ~vHq~Ri~a~~~~~g~ptPEGiH~DG~d~v~~~li~r~N--i~GG~s~i~~~~~~~~~~~~l~~p~d~l~~~D~~-~~H~ 173 (195)
T PF10014_consen 97 GVHQIRIIATPDEPGEPTPEGIHRDGVDFVFIHLINRHN--IEGGESQIYDNDKEILFFFTLLEPGDTLLVDDRR-VWHY 173 (195)
T ss_dssp EEEEEEEETTTS--B--STTSSB--SSSEEEEEEEEEES--EEE--EEEEETTSSEEEEE---STTEEEEEETTT-EEEE
T ss_pred EEEEEEEEEecCccCCcCCCCccCCCCCEEEEEEEcCCC--ccCceEEEEeCCCCcceEEEecCCCCEEEEeCCc-ceEC
Confidence 456677765432 2345899999999999998744 489998885432 223336789999887432 3899
Q ss_pred cccCCc------eeEEEEEee
Q psy14856 717 GLQVTQ------GTRYIMISF 731 (734)
Q Consensus 717 g~~vT~------G~Ryilv~F 731 (734)
+.||++ |.|-+||..
T Consensus 174 vtpI~~~~~~~~g~RDvlvit 194 (195)
T PF10014_consen 174 VTPIRPVDPSRPGYRDVLVIT 194 (195)
T ss_dssp E--EEES-TT---EEEEEEEE
T ss_pred CCceecCCCCCcEEEEEEEEe
Confidence 998873 889998864
No 147
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=68.35 E-value=53 Score=35.05 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=64.1
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
..|+-++-+ -+..+.|...++++.++.-. +++ +|..+. .+.+++++.+.+ ....+.++..++..+-+.|-.
T Consensus 21 ~~PK~ll~l--~g~~~li~~~l~~l~~~~~~-~~i--~vvt~~-~~~~~v~~~l~~---~~~~~~ii~ep~~~gTa~ai~ 91 (274)
T cd02509 21 SYPKQFLKL--FGDKSLLQQTLDRLKGLVPP-DRI--LVVTNE-EYRFLVREQLPE---GLPEENIILEPEGRNTAPAIA 91 (274)
T ss_pred CCCceEeEc--CCCCcHHHHHHHHHhcCCCC-CcE--EEEech-HHHHHHHHHHhh---cCCCceEEECCCCCCcHHHHH
Confidence 457666554 34479999999999987522 334 333332 233455555543 123566666565666666666
Q ss_pred HHHHhhhh-cCccEEEEECCCccCCChHHHHHHH
Q psy14856 369 LAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 369 ~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
.|+....+ ...++++++.+|..+.+.+.+..++
T Consensus 92 ~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l 125 (274)
T cd02509 92 LAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAV 125 (274)
T ss_pred HHHHHHHhcCCCCeEEEecchhcccCHHHHHHHH
Confidence 66665433 3457999999999987655554444
No 148
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=68.21 E-value=12 Score=41.74 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=56.2
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc---eeecccceeEEEeCCCcc------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC---NVTATRMGWMLMHPGRLT------ 712 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~---~v~~~~~G~al~h~g~lt------ 712 (734)
...+.+|-+ +.+-.+.+|+|.+.+||..- + +.||+....... .-+.|.+|..||.-|.+.
T Consensus 196 ~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Q--d-----~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG 268 (358)
T PLN02515 196 KVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ--D-----QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNG 268 (358)
T ss_pred eEEEeecCCCCChhhccCCCCCCCCCeEEEEec--C-----CCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCC
Confidence 345666654 24456889999999999753 2 246777744321 234588899998887531
Q ss_pred ----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|....-..+.||-++.|++|
T Consensus 269 ~~kSt~HRVv~~~~~~R~Si~~F~~P 294 (358)
T PLN02515 269 RFKNADHQAVVNSNCSRLSIATFQNP 294 (358)
T ss_pred eeeeecceEECCCCCCEEEEEEEecC
Confidence 1588766566789999999988
No 149
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=67.02 E-value=39 Score=39.17 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=60.7
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
|+.++ |+-+ .|.|...+++|.+..- +++.+.+ + +..+.++++++.. .+.++..++..|.+.+-..|
T Consensus 26 pK~ll--pi~g-kpli~~~l~~l~~~gi--~~ivvv~-~---~~~~~i~~~~~~~-----~i~~v~~~~~~Gt~~al~~~ 91 (481)
T PRK14358 26 PKVLH--PVAG-RPMVAWAVKAARDLGA--RKIVVVT-G---HGAEQVEAALQGS-----GVAFARQEQQLGTGDAFLSG 91 (481)
T ss_pred Cceec--EECC-eeHHHHHHHHHHhCCC--CeEEEEe-C---CCHHHHHHHhccC-----CcEEecCCCcCCcHHHHHHH
Confidence 44443 3334 4999999999988643 3443333 2 2335566665421 46677666666766666666
Q ss_pred HHhhhhcCccEEEEECCCc-cCCChHHHHHHHHc
Q psy14856 371 VENSLHKGVDFYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~-~L~np~tL~~LI~~ 403 (734)
++.......+ ++++++|. +++ +..++.|++.
T Consensus 92 ~~~l~~~~~~-~lV~~gD~P~i~-~~~l~~ll~~ 123 (481)
T PRK14358 92 ASALTEGDAD-ILVLYGDTPLLR-PDTLRALVAD 123 (481)
T ss_pred HHHhhCCCCc-EEEEeCCeeccC-HHHHHHHHHH
Confidence 6554222345 67799998 665 9999999963
No 150
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=66.62 E-value=59 Score=37.53 Aligned_cols=101 Identities=18% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+.++- +.+ .+.|...++++.+..- .++.+.+.. ..+.+.+++.... ..+.++..++..|-+.+--.
T Consensus 22 ~pK~llp--i~g-kpli~~~l~~l~~~g~--~~iivvv~~----~~~~i~~~~~~~~---~~~~~~~~~~~~Gt~~si~~ 89 (482)
T PRK14352 22 TPKVLHT--LAG-RSMLGHVLHAAAGLAP--QHLVVVVGH----DRERVAPAVAELA---PEVDIAVQDEQPGTGHAVQC 89 (482)
T ss_pred CCceece--eCC-ccHHHHHHHHHHhcCC--CcEEEEECC----CHHHHHHHhhccC---CccEEEeCCCCCCcHHHHHH
Confidence 3555443 334 5799999999998753 344343322 1234444444322 23455555555565666656
Q ss_pred HHHhhhhcCccEEEEECCCc-cCCChHHHHHHHHc
Q psy14856 370 AVENSLHKGVDFYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~-~L~np~tL~~LI~~ 403 (734)
|++...+...|+++++++|. +++ +++|+.|++.
T Consensus 90 al~~l~~~~~~~vlV~~gD~P~~~-~~~l~~li~~ 123 (482)
T PRK14352 90 ALEALPADFDGTVVVTAGDVPLLD-GETLADLVAT 123 (482)
T ss_pred HHHHhccCCCCeEEEEeCCeeccC-HHHHHHHHHH
Confidence 66553222358899999999 565 9999999974
No 151
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=65.90 E-value=52 Score=32.08 Aligned_cols=93 Identities=15% Similarity=0.221 Sum_probs=58.7
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|+..++.+.+. . .+ ++|..+.+... ... ..++++..+ ...|...+-..|++.+ .+
T Consensus 24 ~g~~ll~~~i~~l~~~-~--~~--iivv~~~~~~~------~~~-----~~~~~v~~~~~~~G~~~si~~~l~~~---~~ 84 (181)
T cd02503 24 GGKPLLEHVLERLKPL-V--DE--VVISANRDQER------YAL-----LGVPVIPDEPPGKGPLAGILAALRAA---PA 84 (181)
T ss_pred CCEEHHHHHHHHHHhh-c--CE--EEEECCCChHH------Hhh-----cCCcEeeCCCCCCCCHHHHHHHHHhc---CC
Confidence 3579999999999875 2 23 33443322211 111 135555443 3456566666666553 48
Q ss_pred cEEEEECCCccCCChHHHHHHHHc---CCceeeecc
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR---NESLIAPLL 412 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l 412 (734)
|++|++.+|.-+-++++++.|++. +..++.|..
T Consensus 85 ~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~ 120 (181)
T cd02503 85 DWVLVLACDMPFLPPELLERLLAAAEEGADAVVPKS 120 (181)
T ss_pred CeEEEEeCCcCCCCHHHHHHHHHhhccCCCEEEEee
Confidence 999999999955459999999974 445666654
No 152
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=65.78 E-value=29 Score=35.67 Aligned_cols=98 Identities=15% Similarity=0.213 Sum_probs=64.2
Q ss_pred EecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhc
Q psy14856 298 FIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHK 377 (734)
Q Consensus 298 ~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~ 377 (734)
++-+..|.|...|+++.+..-- ++ ++|.+ .+..+.+++++.+....--.+.++..++..|-+.|--.|.+.....
T Consensus 26 ~i~g~~pli~~~l~~l~~~g~~--~i-i~V~~--~~~~~~i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~~i~~~ 100 (248)
T PF00483_consen 26 PIGGKYPLIDYVLENLANAGIK--EI-IVVVN--GYKEEQIEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALDFIEEE 100 (248)
T ss_dssp EETTEEEHHHHHHHHHHHTTCS--EE-EEEEE--TTTHHHHHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHHHHTTS
T ss_pred eecCCCcchhhhhhhhcccCCc--eE-EEEEe--ecccccccccccccccccccceeeecccccchhHHHHHHHHHhhhc
Confidence 3445459999999999995433 33 22332 3455777777765432212577777777778888888888776542
Q ss_pred C-ccEEEEECCCccCCChHHHHHHHH
Q psy14856 378 G-VDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 378 ~-~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
. .++++++.+|.+.+ . .++.+++
T Consensus 101 ~~~~~~lv~~gD~i~~-~-~~~~~l~ 124 (248)
T PF00483_consen 101 DDDEDFLVLNGDIIFD-D-DLQDMLE 124 (248)
T ss_dssp EE-SEEEEETTEEEES-T-THHHHHH
T ss_pred cccceEEEEecccccc-c-hhhhHHH
Confidence 2 46799999999986 4 4455553
No 153
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=64.94 E-value=18 Score=39.97 Aligned_cols=83 Identities=14% Similarity=0.144 Sum_probs=56.9
Q ss_pred cceeEEEEcCC------CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeec--cceeecccceeEEEeCCCcc----
Q psy14856 645 PMSFVVRYRPD------EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRY--NCNVTATRMGWMLMHPGRLT---- 712 (734)
Q Consensus 645 ~~~fvvrY~~~------~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~--~~~v~~~~~G~al~h~g~lt---- 712 (734)
...++.+|-|- .+-.+.+|+|.+.+|+... + +.||+..... .=.-+.|.+|..||.-|-+.
T Consensus 178 ~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Q--d-----~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wT 250 (335)
T PLN02156 178 SCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRS--N-----DTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMT 250 (335)
T ss_pred ceEeEEeCCCCCCCccccccCCCCccCCCceEEEEe--C-----CCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHh
Confidence 35677888553 2346789999999999763 2 3467776421 11224588899998777431
Q ss_pred ------cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ------HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ------h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-.|+...-....||-+..|+.|
T Consensus 251 Ng~~kSt~HRVv~~~~~~R~SiafF~~P 278 (335)
T PLN02156 251 NGRFKSVKHRVVTNTKRSRISMIYFAGP 278 (335)
T ss_pred CCeeeccceeeecCCCCCEEEEEEeecC
Confidence 1588876666679999999987
No 154
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=64.70 E-value=33 Score=38.06 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=57.1
Q ss_pred cceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeec--c-ceeecccceeEEEeCCCcc-----
Q psy14856 645 PMSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRY--N-CNVTATRMGWMLMHPGRLT----- 712 (734)
Q Consensus 645 ~~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~--~-~~v~~~~~G~al~h~g~lt----- 712 (734)
....+.+|-|- .+-.+.+|+|-+.+|+... + +.||+..... + =.-+.|.+|..||.-|.+.
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d-----~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tn 265 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQ--D-----DVGGLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTN 265 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCCCeEEEEec--C-----CCCceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhC
Confidence 45677788652 3456889999999999642 2 3577887431 1 1223578888888766421
Q ss_pred -----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 -----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 -----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+........||-++-|++|
T Consensus 266 g~~~St~HRVv~~~~~~R~Si~~F~~P 292 (345)
T PLN02750 266 DLYWSAEHRVVVNSQKERFSIPFFFFP 292 (345)
T ss_pred CeeecccceeccCCCCCEEEEEEeecC
Confidence 2688876556789999999988
No 155
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=64.00 E-value=83 Score=30.68 Aligned_cols=100 Identities=17% Similarity=0.325 Sum_probs=58.1
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-CCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-TVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|...++++.+..- +++ +|..+. ...++++.+..+ + .++++...+ ..|...+-..|++. ....
T Consensus 23 ~g~pll~~~i~~l~~~~~--~~i--ivv~~~-~~~~~~~~~~~~----~-~v~~v~~~~~~~g~~~si~~~l~~--~~~~ 90 (188)
T TIGR03310 23 KGKTILEHVVDNALRLFF--DEV--ILVLGH-EADELVALLANH----S-NITLVHNPQYAEGQSSSIKLGLEL--PVQS 90 (188)
T ss_pred CCeeHHHHHHHHHHHcCC--CcE--EEEeCC-cHHHHHHHhccC----C-CeEEEECcChhcCHHHHHHHHhcC--CCCC
Confidence 357999999999987642 333 233222 223334433321 1 466665432 23444444445441 2457
Q ss_pred cEEEEECCCccCCChHHHHHHHHc----CCceeeecc
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL 412 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l 412 (734)
|++|++++|.-+-+++.++.|++. +..++.|..
T Consensus 91 ~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~ 127 (188)
T TIGR03310 91 DGYLFLLGDQPFVTPDIIQLLLEAFALKNDEIVVPLY 127 (188)
T ss_pred CEEEEEeCCcCCCCHHHHHHHHHHHHhCCCcEEEeec
Confidence 999999999954449999999862 334666654
No 156
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=63.99 E-value=45 Score=35.33 Aligned_cols=122 Identities=16% Similarity=0.280 Sum_probs=54.4
Q ss_pred hcCccEEEEECCCccCCChHHHHHHHHc---CCce--eeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcc
Q psy14856 376 HKGVDFYFYVDSDSHLDNPDVLKYLVNR---NESL--IAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKG 450 (734)
Q Consensus 376 ~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~I--VaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G 450 (734)
+.+.||++++|-|+++. ++.|..|++. ++++ ..|...++. .+. .+. .+. +. . ..
T Consensus 84 ~~~~~Wf~~~DDDtyv~-~~~L~~~L~~~~~~~~~yiG~~~~~~~~-------~~~------~~~-~~~---~~-~--~~ 142 (252)
T PF02434_consen 84 NSDKDWFCFADDDTYVN-VENLRRLLSKYDPSEPIYIGRPSGDRPI-------EII------HRF-NPN---KS-K--DS 142 (252)
T ss_dssp HHT-SEEEEEETTEEE--HHHHHHHHTTS-TTS--EEE-EE---------------------------------------
T ss_pred cCCceEEEEEeCCceec-HHHHHHHHhhCCCccCEEeeeeccCccc-------eee------ccc-ccc---cc-C--cC
Confidence 35779999999999995 9999999974 3332 222221110 000 000 000 00 0 11
Q ss_pred eeeeceeeeEEeeehhhHhhcc--cc-cccc----cCCCchhHHHHHHHHH-cCeeEEEecccceEEeeccCCCCCC
Q psy14856 451 IWNVPYITNCYLMKTSVIKATN--IK-TIYT----LNSMDYDMAFCTNLRN-KGIHLKIDSTQEYGHLVDSENFDPQ 519 (734)
Q Consensus 451 ~~nVP~v~~~~LI~~~vL~~~~--~~-~~f~----~~~~deDm~Fc~~ar~-~Gi~myv~N~~~~G~l~~~~~~~~~ 519 (734)
.+.-+.=++-+.|+|.+++++. .. ..+. ....-|||.+..-+.. .||.+.-++ ..-.|+..-..|.+.
T Consensus 143 ~~~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~-~fhs~~~~l~~~~~~ 218 (252)
T PF02434_consen 143 GFWFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSP-LFHSHLENLQDYNPE 218 (252)
T ss_dssp ---EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-T-T---SSS-GGG--TT
T ss_pred ceEeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeech-hhcccCcccccCCHH
Confidence 1112222356889999998721 01 1222 2246899999999988 999997764 334455443344433
No 157
>PLN02216 protein SRG1
Probab=63.84 E-value=35 Score=38.03 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=57.2
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCccc-------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLTH------- 713 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lth------- 713 (734)
...+.+|-| +.+-.+.+|.|.+.+|+..--+ +-||+.....+ =.-+.|.+|..||.-|.+..
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~------~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~ 284 (357)
T PLN02216 211 SIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVN------EVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTY 284 (357)
T ss_pred eeEEeecCCCCCcccccCccCcccCceEEEEEecC------CCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCee
Confidence 456677754 3445688999999999876333 24567664322 11245889999999886422
Q ss_pred ---ccCcccCCceeEEEEEeeeCC
Q psy14856 714 ---YHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 714 ---~H~g~~vT~G~Ryilv~F~~p 734 (734)
.|++..-..+.||-+..|++|
T Consensus 285 kS~~HRVv~~~~~~R~Si~~F~~P 308 (357)
T PLN02216 285 RSIEHRGVVNSEKERLSVATFHNT 308 (357)
T ss_pred eccCceeecCCCCCEEEEEEEecC
Confidence 388876666789999999988
No 158
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=63.78 E-value=79 Score=34.07 Aligned_cols=106 Identities=8% Similarity=0.094 Sum_probs=58.8
Q ss_pred EEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC---------CcH
Q psy14856 293 VLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST---------VNS 363 (734)
Q Consensus 293 V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~---------~g~ 363 (734)
|+|+...+|-.+-+..++.||..= ....+++.|.++ +-+.+.++++.+.....-.+|.++..++. ...
T Consensus 3 ~~iv~~~~~y~~~~~~~i~Sil~n--~~~~~~fhii~d-~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 79 (280)
T cd06431 3 VAIVCAGYNASRDVVTLVKSVLFY--RRNPLHFHLITD-EIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHY 79 (280)
T ss_pred EEEEEccCCcHHHHHHHHHHHHHc--CCCCEEEEEEEC-CcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccch
Confidence 666666677678889999999654 344355545442 23445555554332222234555543211 011
Q ss_pred HHH---HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 364 KEA---RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 364 a~a---rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
+.+ -...+...+....|=++++|+|+++. +-|.+|-+.
T Consensus 80 s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~--~di~eL~~~ 120 (280)
T cd06431 80 SGIYGLMKLVLTEALPSDLEKVIVLDTDITFA--TDIAELWKI 120 (280)
T ss_pred hhHHHHHHHHHHHhchhhcCEEEEEcCCEEEc--CCHHHHHHH
Confidence 111 12233333334689999999999996 556667654
No 159
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=63.54 E-value=16 Score=40.80 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=55.2
Q ss_pred eeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc-eeecccceeEEEeCCCcc---------
Q psy14856 647 SFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC-NVTATRMGWMLMHPGRLT--------- 712 (734)
Q Consensus 647 ~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~-~v~~~~~G~al~h~g~lt--------- 712 (734)
..+.+|-+ +.+-.+++|+|.+.+|+... + +.||+.....+. .-+.|.+|..||.-|.+-
T Consensus 213 lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~q--d-----~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~k 285 (360)
T PLN03178 213 MKINYYPRCPQPDLALGVEAHTDVSALTFILH--N-----MVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYK 285 (360)
T ss_pred hheeccCCCCCCccccCcCCccCCCceEEEee--C-----CCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccc
Confidence 34566643 34557889999999999852 2 356777754321 124588999999887531
Q ss_pred -cccCcccCCceeEEEEEeeeCC
Q psy14856 713 -HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 -h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+...-..+.||-+..|++|
T Consensus 286 St~HRVv~~~~~~R~Si~~F~~P 308 (360)
T PLN03178 286 SILHRGLVNKEKVRISWAVFCEP 308 (360)
T ss_pred cccceeecCCCCCeEEEEEEecC
Confidence 1588754445679999999988
No 160
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=61.82 E-value=68 Score=36.69 Aligned_cols=89 Identities=10% Similarity=0.041 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+... .++.+.+ . +..+.+.+.+.+ ...+.++..++..|-+.+-..|++... ...|++
T Consensus 31 ~pli~~~l~~l~~~gi--~~iiiv~-~---~~~~~i~~~~~~----~~~i~~~~~~~~~Gt~~al~~a~~~l~-~~~~~v 99 (459)
T PRK14355 31 RPMVSWPVAAAREAGA--GRIVLVV-G---HQAEKVREHFAG----DGDVSFALQEEQLGTGHAVACAAPALD-GFSGTV 99 (459)
T ss_pred ccHHHHHHHHHHhcCC--CeEEEEE-C---CCHHHHHHHhcc----CCceEEEecCCCCCHHHHHHHHHHHhh-ccCCcE
Confidence 3899999999998643 3343333 2 222334444322 124666655666676666666666542 236899
Q ss_pred EEECCCc-cCCChHHHHHHHHc
Q psy14856 383 FYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~vDAD~-~L~np~tL~~LI~~ 403 (734)
+++++|. +++ +..|+.|++.
T Consensus 100 lv~~gD~p~~~-~~~i~~l~~~ 120 (459)
T PRK14355 100 LILCGDVPLLR-AETLQGMLAA 120 (459)
T ss_pred EEEECCccCcC-HHHHHHHHHH
Confidence 9999999 665 8999999964
No 161
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=61.12 E-value=41 Score=36.91 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 363 SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 363 ~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.-..||.|+..| .++|+|++|+|.+.. ++.-+.|.+
T Consensus 115 iN~LRNvAr~~a---~T~~v~~~DvD~~ps-~~l~~~l~~ 150 (317)
T PF13896_consen 115 INLLRNVARSGA---RTDYVFLLDVDFLPS-PGLYEKLLR 150 (317)
T ss_pred hHHHHHHHHHhc---CcceEEEecceeeeC-cchHHHHHH
Confidence 347999999886 599999999999996 776665553
No 162
>KOG3917|consensus
Probab=61.09 E-value=18 Score=37.68 Aligned_cols=153 Identities=17% Similarity=0.217 Sum_probs=86.5
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~a 366 (734)
..+-+..++||-+..-.-|-+|.-.+.+ |.-.+.+=+|+|-|.+|.-. | ..|..
T Consensus 71 aS~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~HHI~vlNQvD~fR-------------F------------NRAsL 125 (310)
T KOG3917|consen 71 ASYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVSHHILVLNQVDPFR-------------F------------NRASL 125 (310)
T ss_pred ccceeEEEEechHHHHHHHHHhhHHHHHHHhhcCcceEEEEeeccCcce-------------e------------chhhh
Confidence 3567889999988654434444333322 22223334455555443311 1 12344
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCceeeeccc-CCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLV-RPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~-~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
-|-|...|.. -|||+..-|.|...-||+..-.. ..+..|... +| ++ .+. | .++.
T Consensus 126 INVGf~eas~-~~DYiaMhDVDLLPlN~el~Y~f----P~~~gp~HiasP-~l--------HPk--Y-HY~~-------- 180 (310)
T KOG3917|consen 126 INVGFNEASR-LCDYIAMHDVDLLPLNPELPYDF----PGIGGPRHIASP-QL--------HPK--Y-HYEK-------- 180 (310)
T ss_pred eecchhhhcc-hhceeeecccccccCCCCCCCCC----CccCCcccccCc-cc--------Cch--h-hhhh--------
Confidence 5566666543 49999999999998877654211 123333321 11 00 000 0 1122
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHcCeeEEE
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNKGIHLKI 501 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~Gi~myv 501 (734)
||+++.|++++-.+..+++ ..|..+.+.+| .|-.+.+.+|..++=
T Consensus 181 ----------fvGGILll~~~hyk~~NGMSN~yWGWGlEDD-EFy~RI~dagLqltR 226 (310)
T KOG3917|consen 181 ----------FVGGILLLTLKHYKKLNGMSNKYWGWGLEDD-EFYLRIIDAGLQLTR 226 (310)
T ss_pred ----------hcceeEEeeHHHHHHhcCccccccccCcccc-hhhheeccccceEec
Confidence 3446678888888875555 77887777666 788889999988763
No 163
>PLN02458 transferase, transferring glycosyl groups
Probab=60.92 E-value=1.4e+02 Score=33.17 Aligned_cols=99 Identities=15% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCCcEEEEEEecCC----hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCC--c
Q psy14856 289 QFPSVLISVFIDKP----TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTV--N 362 (734)
Q Consensus 289 ~~P~V~I~I~i~n~----~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~--g 362 (734)
..+.|.|+.|.|.. ...|-+.-..|....+| ++-+|......|.+ +.+++.+.+-.|..+..-..-... .
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p---L~WIVVEd~~~t~~-va~lLrrsGl~y~HL~~k~~~~~~~~r 185 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP---LLWIVVEGQSDSEE-VSEMLRKTGIMYRHLVFKENFTDPEAE 185 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC---ceEEEEeCCCCCHH-HHHHHHHcCCceEEeccCCCCCCccch
Confidence 45678888899973 34555666666666655 54334442234444 888998888766554332111111 1
Q ss_pred HHHHHHHHHHhhhh-cCccEEEEECCCccC
Q psy14856 363 SKEARNLAVENSLH-KGVDFYFYVDSDSHL 391 (734)
Q Consensus 363 ~a~arN~al~~a~~-~~~DYlf~vDAD~~L 391 (734)
...-||.||..-++ ...-.+.|-|-|...
T Consensus 186 ~~~QRN~AL~~IR~h~l~GVVyFADDdNtY 215 (346)
T PLN02458 186 LDHQRNLALRHIEHHKLSGIVHFAGLSNVY 215 (346)
T ss_pred hHHHHHHHHHHHHhcCcCceEEEccCCCcc
Confidence 13449999987765 222344445544443
No 164
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=60.65 E-value=20 Score=40.10 Aligned_cols=82 Identities=23% Similarity=0.284 Sum_probs=56.4
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc--ceeecccceeEEEeCCCc--------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN--CNVTATRMGWMLMHPGRL-------- 711 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--~~v~~~~~G~al~h~g~l-------- 711 (734)
...+.+|-| +..-.+++|+|.+.+||..- + +.||+.....+ =.-+.|.+|..||.-|.+
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Q--d-----~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~ 283 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQ--S-----NTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGR 283 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCCCcEEEEec--C-----CCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCe
Confidence 456677754 34456899999999999873 2 23566664332 122458899999987742
Q ss_pred --ccccCcccCCceeEEEEEeeeCC
Q psy14856 712 --THYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 712 --th~H~g~~vT~G~Ryilv~F~~p 734 (734)
--+|++..-....||-+..|++|
T Consensus 284 ~kS~~HRVv~~~~~~R~Sia~F~~P 308 (358)
T PLN02254 284 FPSVLHRAVVNKTRHRISVAYFYGP 308 (358)
T ss_pred eccccceeecCCCCCEEEEEEEecC
Confidence 12688865555689999999988
No 165
>PLN02704 flavonol synthase
Probab=60.24 E-value=22 Score=39.21 Aligned_cols=72 Identities=21% Similarity=0.192 Sum_probs=49.9
Q ss_pred CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc----------cccCcccCCcee
Q psy14856 656 EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT----------HYHEGLQVTQGT 724 (734)
Q Consensus 656 ~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt----------h~H~g~~vT~G~ 724 (734)
.+-.+++|+|-+.+|+..- + +.||+.....+ =.-+.|.+|..||.-|.+- -+|+...--...
T Consensus 214 ~~~g~~~HtD~g~lTlL~q--d-----~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~ 286 (335)
T PLN02704 214 LALGVVAHTDMSAITILVP--N-----EVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKT 286 (335)
T ss_pred cccCccCccCCcceEEEec--C-----CCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCC
Confidence 3456889999999998764 3 35567764211 1124578899999887531 158886544567
Q ss_pred EEEEEeeeCC
Q psy14856 725 RYIMISFVDP 734 (734)
Q Consensus 725 Ryilv~F~~p 734 (734)
||-+..|++|
T Consensus 287 R~Si~~F~~p 296 (335)
T PLN02704 287 RMSWPVFLEP 296 (335)
T ss_pred eEEEEEEecC
Confidence 9999999987
No 166
>PLN02485 oxidoreductase
Probab=60.10 E-value=20 Score=39.47 Aligned_cols=84 Identities=11% Similarity=0.059 Sum_probs=56.5
Q ss_pred cceeEEEEcCC--------CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc--ceeecccceeEEEeCCCc---
Q psy14856 645 PMSFVVRYRPD--------EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN--CNVTATRMGWMLMHPGRL--- 711 (734)
Q Consensus 645 ~~~fvvrY~~~--------~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--~~v~~~~~G~al~h~g~l--- 711 (734)
....+.+|-|- .+-.+.+|+|-+.+|+... + =+-||+...... =.-+.|.+|..||.-|.+
T Consensus 184 ~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~q--d----~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~ 257 (329)
T PLN02485 184 WVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQ--D----DDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKI 257 (329)
T ss_pred ceEEEEeCCCCccccCCcccCcccccccCCCeEEEEec--c----CCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHH
Confidence 35677778542 3456889999999998532 2 123677775321 112457899999887742
Q ss_pred -c------cccCcccCCceeEEEEEeeeCC
Q psy14856 712 -T------HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 712 -t------h~H~g~~vT~G~Ryilv~F~~p 734 (734)
| -+|++..-....||-++.|+.|
T Consensus 258 ~TnG~~~St~HRVv~~~~~~R~Si~~F~~p 287 (329)
T PLN02485 258 WSNGVYQSTLHRVINNSPKYRVCVAFFYET 287 (329)
T ss_pred HHCCEeeCCCceecCCCCCCeEEEEEEecC
Confidence 1 1588886655679999999987
No 167
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=60.02 E-value=53 Score=32.57 Aligned_cols=94 Identities=23% Similarity=0.243 Sum_probs=57.3
Q ss_pred CcEEEEEeecCCCchHHHHHH-HHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEeccce
Q psy14856 32 DKFLVITVASNETDGYKRFIQ-SAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDV 110 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~-Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv 110 (734)
+++.|+.+-...+++....++ .+...+..+.++-... + +...|...+...++... .| +|+|+|+-++
T Consensus 27 ~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~---~------~~~g~~~a~n~g~~~~~--~d-~i~~~D~D~~ 94 (229)
T cd04192 27 EKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR---V------SISGKKNALTTAIKAAK--GD-WIVTTDADCV 94 (229)
T ss_pred CceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC---c------ccchhHHHHHHHHHHhc--CC-EEEEECCCcc
Confidence 457888888888888888776 4444444566662211 1 12234455555665432 34 9999999775
Q ss_pred eEeCCHHHHHHHHhcCCCcEEEccCCc
Q psy14856 111 IIDGGVNDILERFNTFDANIVFGAERL 137 (734)
Q Consensus 111 ~f~~~~~~ll~rf~~~~~~ilfsae~~ 137 (734)
+--.-.+.+++.|.+.+.-++.+.-..
T Consensus 95 ~~~~~l~~l~~~~~~~~~~~v~~~~~~ 121 (229)
T cd04192 95 VPSNWLLTFVAFIQKEQIGLVAGPVIY 121 (229)
T ss_pred cCHHHHHHHHHHhhcCCCcEEeeeeee
Confidence 533334788887777665566655433
No 168
>KOG4748|consensus
Probab=59.82 E-value=77 Score=35.46 Aligned_cols=155 Identities=13% Similarity=0.002 Sum_probs=91.0
Q ss_pred hheeccccCCCCC-CCCcEEEEEeecCCCc-----------hHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchH
Q psy14856 17 FFISVHCNKVKNI-DEDKFLVITVASNETD-----------GYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKV 84 (734)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~l~vltvat~~~~-----------~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki 84 (734)
|+..-+....... .++++++|+...-... .++-=+..|+.+||.+...-..+.=.-. .-+|.-+|+
T Consensus 86 ~~~~~~~~~~~~~p~~~~IvlL~~S~~~~~~n~~~~~~~~~~ikNridYA~rHgy~~~~~~~~~~~~~~--e~~~~W~Ki 163 (364)
T KOG4748|consen 86 TLNVHPLFTSFPNPDSDRIVLLTGSDGGPCDNSPGNHYLLKSIKNRIDYARRHGYEFEYKNATLDKRYH--ELPGVWAKL 163 (364)
T ss_pred EeecCccccccCCCCCCEEEEEEccCCCCCCCCcccHHHHHHHHhHHHHHHHhCCeEEEEecccccccc--cccchhHHh
Confidence 4444343333223 3466666665443322 2233457999999999876332220000 145677999
Q ss_pred HHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcC----------CCcEEEccC----CcccCCCcC-cccCC
Q psy14856 85 NLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTF----------DANIVFGAE----RLCWPDTSL-YDKYP 149 (734)
Q Consensus 85 ~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~----------~~~ilfsae----~~cwP~~~l-~~~yP 149 (734)
..|++.+.+|++ =.-|=.+|+ |++|.-+-..|-+.+.+- +++.+-+.. ..|=|...+ .+--|
T Consensus 164 P~Ir~tM~kyP~--AeWIWWlD~-DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ 240 (364)
T KOG4748|consen 164 PAIRQTMLKYPD--AEWIWWLDQ-DALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAF 240 (364)
T ss_pred HHHHHHHHHCCC--CcEEEEecc-cchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhce
Confidence 999999999975 458999999 999988876666655552 355554444 344443322 22222
Q ss_pred CCCCC-CcccccceeeeeHHH-HHHHHHhc
Q psy14856 150 AVGSG-YRYLNSGGFIGYAKD-IKELISNR 177 (734)
Q Consensus 150 ~~~~g-~R~LNSG~~iG~a~~-l~~l~~~~ 177 (734)
-...+ .+ +|.|.|.=.-.. .+.+++.|
T Consensus 241 ii~qD~nG-~naGSfLirns~~~~~llD~w 269 (364)
T KOG4748|consen 241 IIPQDCNG-INAGSFLIRNSEWGRLLLDAW 269 (364)
T ss_pred ecccCCCC-ccccceEEecCccchhHHHhc
Confidence 22223 33 999998777666 66666654
No 169
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=59.71 E-value=1.6e+02 Score=32.22 Aligned_cols=95 Identities=18% Similarity=0.206 Sum_probs=47.3
Q ss_pred HHHHHHHHHc---ccCCCceEEEEEec-CCCCcHHHHHHHHHHhccC-cceEEEEe-CCCCCcH-------HHHHHHHHH
Q psy14856 306 LEEFLNKIAN---LNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTM-FKNVKYIA-HNSTVNS-------KEARNLAVE 372 (734)
Q Consensus 306 L~~fL~sL~~---LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~-y~~V~ii~-~~~~~g~-------a~arN~al~ 372 (734)
+++.+.+|.+ -+--..+++||.++ ..+...+.+++|....... ...+..+. +..+..+ +..-...+.
T Consensus 12 ~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~~~~y~RL~ip 91 (304)
T cd06430 12 LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFKPCAAQRLFLP 91 (304)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhcccHHHHHHHHHH
Confidence 3444444444 35333444444433 3455556688886543221 11222222 2221111 222223333
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
..+. +.|-++.+|+|+++. .-|+.|.+.
T Consensus 92 ~lLp-~~dkvLYLD~Dii~~--~dI~eL~~~ 119 (304)
T cd06430 92 SLLP-DVDSLLYVDTDILFL--RPVEEIWSF 119 (304)
T ss_pred HHhh-hhceEEEeccceeec--CCHHHHHHH
Confidence 3333 679999999999996 556676654
No 170
>PLN02400 cellulose synthase
Probab=59.69 E-value=17 Score=45.81 Aligned_cols=72 Identities=15% Similarity=0.259 Sum_probs=57.4
Q ss_pred CCCCcHHHHHHHHHHhcc------CcceEEEEeCCCCCc-----HHHHHHHHHH-hhhhcCccEEEEECCCccCCChHHH
Q psy14856 330 NQEYHAPLFDDYIHNFKT------MFKNVKYIAHNSTVN-----SKEARNLAVE-NSLHKGVDFYFYVDSDSHLDNPDVL 397 (734)
Q Consensus 330 s~D~t~~il~~f~~~~~~------~y~~V~ii~~~~~~g-----~a~arN~al~-~a~~~~~DYlf~vDAD~~L~np~tL 397 (734)
+...|..+||=+++..+. .-+.+.++..+++.+ +|.|.|..+. -|.-.++.|++-+|+|...+||+++
T Consensus 497 ~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~ 576 (1085)
T PLN02400 497 NPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAL 576 (1085)
T ss_pred CCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhH
Confidence 445778888887765432 466778888888776 6889998887 4445899999999999999999999
Q ss_pred HHHH
Q psy14856 398 KYLV 401 (734)
Q Consensus 398 ~~LI 401 (734)
++-+
T Consensus 577 r~AM 580 (1085)
T PLN02400 577 KEAM 580 (1085)
T ss_pred Hhhh
Confidence 9877
No 171
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=59.67 E-value=65 Score=36.52 Aligned_cols=89 Identities=13% Similarity=0.209 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.+.|+..|+++.+.... ++.+++.. ..+.+++.+.+. ..++++.+++..|.+.+-..+++... ...+++
T Consensus 29 kpli~~~l~~l~~~g~~--~iivvv~~----~~~~i~~~~~~~----~~i~~v~~~~~~G~~~sv~~~~~~l~-~~~~~v 97 (450)
T PRK14360 29 KSLVERVLDSCEELKPD--RRLVIVGH----QAEEVEQSLAHL----PGLEFVEQQPQLGTGHAVQQLLPVLK-GFEGDL 97 (450)
T ss_pred hhHHHHHHHHHHhCCCC--eEEEEECC----CHHHHHHHhccc----CCeEEEEeCCcCCcHHHHHHHHHHhh-ccCCcE
Confidence 49999999999986543 44343322 223344444322 25667765555555555555555432 224667
Q ss_pred EEECCCc-cCCChHHHHHHHHc
Q psy14856 383 FYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~vDAD~-~L~np~tL~~LI~~ 403 (734)
+++++|. +++ ++.|+.|++.
T Consensus 98 lV~~~D~P~i~-~~~l~~ll~~ 118 (450)
T PRK14360 98 LVLNGDVPLLR-PETLEALLNT 118 (450)
T ss_pred EEEeCCccccC-HHHHHHHHHH
Confidence 8899998 555 9999999863
No 172
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=59.52 E-value=91 Score=32.19 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=55.4
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC----CCcHHHHHHHHHHhhhh-
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS----TVNSKEARNLAVENSLH- 376 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~----~~g~a~arN~al~~a~~- 376 (734)
..|.|...++.+.+..+-+ + ++| ++|. .+ +.+.+++.+. .|.+.++++ ..+...+-..|++...+
T Consensus 23 GkpLi~~ti~~a~~s~~~d-~--IvV--std~-~~-i~~~a~~~g~---~v~~~r~~~l~~d~~~~~~si~~~l~~l~~~ 92 (222)
T TIGR03584 23 GKPMIAYSIEAALNSGLFD-K--VVV--STDD-EE-IAEVAKSYGA---SVPFLRPKELADDFTGTAPVVKHAIEELKLQ 92 (222)
T ss_pred CcCHHHHHHHHHHhCCCCC-E--EEE--eCCC-HH-HHHHHHHcCC---EeEEeChHHHcCCCCCchHHHHHHHHHHhhc
Confidence 3688899999998876654 2 334 2232 23 4445554431 232333322 23334455555554322
Q ss_pred cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
...|+++++++|.=+-.++.|+.+++
T Consensus 93 ~~~d~v~~l~~tsPl~~~~~I~~~i~ 118 (222)
T TIGR03584 93 KQYDHACCIYATAPFLQAKILKEAFE 118 (222)
T ss_pred CCCCEEEEecCCCCcCCHHHHHHHHH
Confidence 35799999999998888999999996
No 173
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=58.05 E-value=1.4e+02 Score=29.58 Aligned_cols=95 Identities=17% Similarity=0.187 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.++|...++.+.+... +++ +|..+ +.+ +.+++... .++++.... .|...+-..|++.+. ..++.+
T Consensus 30 ~~ll~~~l~~l~~~~~--~~v--vvv~~---~~~-~~~~~~~~-----~v~~i~~~~-~G~~~si~~al~~~~-~~~~~v 94 (195)
T TIGR03552 30 LAMLRDVITALRGAGA--GAV--LVVSP---DPA-LLEAARNL-----GAPVLRDPG-PGLNNALNAALAEAR-EPGGAV 94 (195)
T ss_pred HHHHHHHHHHHHhcCC--CCE--EEECC---CHH-HHHHHHhc-----CCEEEecCC-CCHHHHHHHHHHHhh-ccCCeE
Confidence 5788888888887643 333 33332 122 33343322 455665443 366777777776643 357899
Q ss_pred EEECCCccCCChHHHHHHHHc---CCceeeecc
Q psy14856 383 FYVDSDSHLDNPDVLKYLVNR---NESLIAPLL 412 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~~---nk~IVaP~l 412 (734)
+++-+|.=+-++++|+.|++. ...++.|..
T Consensus 95 lv~~~D~P~l~~~~i~~l~~~~~~~~~vi~p~~ 127 (195)
T TIGR03552 95 LILMADLPLLTPRELKRLLAAATEGDVVIAPDR 127 (195)
T ss_pred EEEeCCCCCCCHHHHHHHHHhcccCCEEEEecC
Confidence 999999865459999999973 345777765
No 174
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=58.00 E-value=1.1e+02 Score=30.62 Aligned_cols=102 Identities=14% Similarity=0.193 Sum_probs=58.1
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
|+.++-+ +..+.|...++++.+..... ++ +|..+.+ ..+..+.. ..... -..+.++.+.+ +...+-..|
T Consensus 19 ~K~l~~i---~Gkpll~~~i~~l~~~~~~~-~i--vVv~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~--~~~~si~~a 87 (218)
T cd02516 19 PKQFLEL---GGKPVLEHTLEAFLAHPAID-EI--VVVVPPD-DIDLAKEL-AKYGL-SKVVKIVEGGA--TRQDSVLNG 87 (218)
T ss_pred CcceeEE---CCeEHHHHHHHHHhcCCCCC-EE--EEEeChh-HHHHHHHH-Hhccc-CCCeEEECCch--HHHHHHHHH
Confidence 4544443 45799999999999875432 33 3333222 22333222 11111 12345554322 334445555
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
++...+...|+++++++|.=+-++++++.|++.
T Consensus 88 l~~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~ 120 (218)
T cd02516 88 LKALPDADPDIVLIHDAARPFVSPELIDRLIDA 120 (218)
T ss_pred HHhcccCCCCEEEEccCcCCCCCHHHHHHHHHH
Confidence 544321368999999999866669999999973
No 175
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=57.55 E-value=36 Score=37.39 Aligned_cols=83 Identities=19% Similarity=0.241 Sum_probs=55.0
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
...+.+|-|- .+..+++|+|.+.+|+..-=+ +.||+...+.+ =.-..|.+|..||.-|.+-
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~------~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~ 232 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDD------KVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKY 232 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCCeEEEEEecC------CCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCce
Confidence 4567888642 334688999999999875321 23455553221 1123578899998877531
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-.|+...-..+.||-+..|++|
T Consensus 233 kS~~HRVv~~~~~~R~Si~~F~~p 256 (321)
T PLN02299 233 KSVMHRVVAQTDGNRMSIASFYNP 256 (321)
T ss_pred ecccceeecCCCCCEEEEEEEecC
Confidence 1577775556789999999987
No 176
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=57.25 E-value=69 Score=31.60 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=48.8
Q ss_pred EEEEEeecCCCchHHHHHHHH-HHc-CCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 34 FLVITVASNETDGYKRFIQSA-EVN-KLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 34 l~vltvat~~~~~~~r~~~Sa-~~~-~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
+-|+.|....+|+-...++.. ..+ +..++++-... ..|.+.|.+.+...++.-. -| +|+|.|+-+++
T Consensus 31 ~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~n~g~~~a~--~d-~i~~~D~D~~~ 99 (196)
T cd02520 31 YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGE--------KVGINPKVNNLIKGYEEAR--YD-ILVISDSDISV 99 (196)
T ss_pred eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCC--------cCCCCHhHHHHHHHHHhCC--CC-EEEEECCCceE
Confidence 666666666666655544332 221 12333331111 2244567777777776543 34 99999995433
Q ss_pred EeCCHHHHHHHHhcCCCcEEEcc
Q psy14856 112 IDGGVNDILERFNTFDANIVFGA 134 (734)
Q Consensus 112 f~~~~~~ll~rf~~~~~~ilfsa 134 (734)
--.-.+.+++.+.+.+..+|.+.
T Consensus 100 ~~~~l~~l~~~~~~~~~~~v~~~ 122 (196)
T cd02520 100 PPDYLRRMVAPLMDPGVGLVTCL 122 (196)
T ss_pred ChhHHHHHHHHhhCCCCCeEEee
Confidence 11223777877755555566654
No 177
>PLN02997 flavonol synthase
Probab=57.13 E-value=22 Score=39.22 Aligned_cols=82 Identities=17% Similarity=0.088 Sum_probs=55.5
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCccc-------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLTH------- 713 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lth------- 713 (734)
..++.+|-|- ..-.+.+|+|.+.+|+... + +-||+.....+ =.-+.|.+|..||.-|.+-+
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q--d-----~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~ 256 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDMGAIALLIP--N-----EVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRF 256 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCCCceEEEec--C-----CCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCcc
Confidence 4566777553 3456899999999999853 2 23566664322 11235788999998885322
Q ss_pred ---ccCcccCCceeEEEEEeeeCC
Q psy14856 714 ---YHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 714 ---~H~g~~vT~G~Ryilv~F~~p 734 (734)
+|++..-....||-+..|++|
T Consensus 257 kSt~HRVv~~~~~~R~Si~fF~~P 280 (325)
T PLN02997 257 KNVLHRAKTDKERLRISWPVFVAP 280 (325)
T ss_pred ccccceeeCCCCCCEEEEEEEecC
Confidence 488865445679999999988
No 178
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=56.89 E-value=24 Score=38.98 Aligned_cols=82 Identities=18% Similarity=0.226 Sum_probs=55.2
Q ss_pred cceeEEEEcCCC-----CCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc------ceeecccceeEEEeCCCcc-
Q psy14856 645 PMSFVVRYRPDE-----QPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN------CNVTATRMGWMLMHPGRLT- 712 (734)
Q Consensus 645 ~~~fvvrY~~~~-----~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~------~~v~~~~~G~al~h~g~lt- 712 (734)
....+.+|-|-. +-.+++|+|.+.+||... + +-||+...... =.-+.|.+|..||.-|.+-
T Consensus 182 ~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q--d-----~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~ 254 (332)
T PLN03002 182 ATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLAT--D-----GVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLE 254 (332)
T ss_pred hheeeeeCCCCCCcccCccccccccCCCeEEEEee--C-----CCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHH
Confidence 346778886532 345789999999998853 3 24567764321 1124578899999888531
Q ss_pred ---------cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ---------HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ---------h~H~g~~vT~G~Ryilv~F~~p 734 (734)
.+|+... .+..||-+..|+.|
T Consensus 255 ~wTng~~kSt~HRVv~-~~~~R~Sia~F~~p 284 (332)
T PLN03002 255 RWSNGFFKSTLHRVLG-NGQERYSIPFFVEP 284 (332)
T ss_pred HHhCCeeECcCCeecC-CCCCeeEEEEEecC
Confidence 1488853 35579999999987
No 179
>PTZ00273 oxidase reductase; Provisional
Probab=56.81 E-value=48 Score=36.27 Aligned_cols=81 Identities=19% Similarity=0.194 Sum_probs=55.1
Q ss_pred ceeEEEEcCC-----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc--eeecccceeEEEeCCCcc------
Q psy14856 646 MSFVVRYRPD-----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC--NVTATRMGWMLMHPGRLT------ 712 (734)
Q Consensus 646 ~~fvvrY~~~-----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~--~v~~~~~G~al~h~g~lt------ 712 (734)
...+.+|-|. .+-.+.+|+|.+.+|+... + +.||+......- .-..|.+|..||.-|.+-
T Consensus 178 ~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q--d-----~~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG 250 (320)
T PTZ00273 178 VFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQ--D-----SVGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNG 250 (320)
T ss_pred eeeeeecCCCCCccccCcccccccCCCeEEEEec--C-----CCCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCC
Confidence 4567788653 2346789999999998752 2 346787643221 224588999998877321
Q ss_pred ----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+... ....||-++.|++|
T Consensus 251 ~~kSt~HRVv~-~~~~R~Si~~F~~p 275 (320)
T PTZ00273 251 RYRSTPHRVVN-TGVERYSMPFFCEP 275 (320)
T ss_pred eeeCCCccccC-CCCCeEEEEEEEcC
Confidence 2688863 34689999999988
No 180
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=56.52 E-value=1.3e+02 Score=33.93 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=61.0
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC--CcHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST--VNSKEAR 367 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~--~g~a~ar 367 (734)
.|+-++-+ ...|.|...++.+.+. ..++.+.+. +..+.+++.+.+. +..++++..++. .+.+.|.
T Consensus 20 ~pK~Llpi---~gkPli~~~i~~l~~~---~~~i~Ivv~----~~~~~i~~~~~~~---~~~v~~~~~~~~~~~gt~~al 86 (430)
T PRK14359 20 LPKVLHTI---CGKPMLFYILKEAFAI---SDDVHVVLH----HQKERIKEAVLEY---FPGVIFHTQDLENYPGTGGAL 86 (430)
T ss_pred CCceeCEE---CCccHHHHHHHHHHHc---CCcEEEEEC----CCHHHHHHHHHhc---CCceEEEEecCccCCCcHHHH
Confidence 35554433 2469999999999875 245555442 2234555555432 335676654322 3333322
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCceeeec
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPL 411 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~ 411 (734)
..++ ...|+++++++|..+..+++|+.|++.+..+..+.
T Consensus 87 ----~~~~-~~~d~vlv~~gD~p~~~~~~l~~l~~~~~~~~v~~ 125 (430)
T PRK14359 87 ----MGIE-PKHERVLILNGDMPLVEKDELEKLLENDADIVMSV 125 (430)
T ss_pred ----hhcc-cCCCeEEEEECCccCCCHHHHHHHHhCCCCEEEEE
Confidence 2222 34799999999994445999999998655544333
No 181
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=56.40 E-value=32 Score=38.24 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=57.0
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
...+.+|-|- .+-.+.+|+|-+.+|+... + +.||+...+.+ =.-+.|.+|..||.-|.+-
T Consensus 198 ~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Q--d-----~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~ 270 (348)
T PLN02912 198 HMAINYYPPCPQPELTYGLPGHKDANLITVLLQ--D-----EVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKY 270 (348)
T ss_pred eeeeeecCCCCChhhcCCcCCCcCCCceEEEEE--C-----CCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEE
Confidence 4556777553 3456889999999998753 2 35677775322 1123578899998877531
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+......+.||-+..|+.|
T Consensus 271 kSt~HRVv~~~~~~R~Sia~F~~p 294 (348)
T PLN02912 271 KSVLHRAVVNTDKERISIPTFYCP 294 (348)
T ss_pred EcccccccCCCCCCEEEEEEEecC
Confidence 1588876556789999999987
No 182
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=55.79 E-value=1.3e+02 Score=30.82 Aligned_cols=103 Identities=11% Similarity=0.152 Sum_probs=58.7
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+.++-+ +..|.|...++++.+..-- +++ +|..+ +.....+++.+++.+.....++++..... ...+-..
T Consensus 20 ~~K~l~~l---~gkpll~~~i~~~~~~~~~-~~i--vVv~~-~~~~~~~~~~~~~~~~~~~~~~~v~~g~~--r~~sv~~ 90 (230)
T PRK13385 20 LNKMWLDL---VGEPIFIHALRPFLADNRC-SKI--IIVTQ-AQERKHVQDLMKQLNVADQRVEVVKGGTE--RQESVAA 90 (230)
T ss_pred CCcceeEE---CCeEHHHHHHHHHHcCCCC-CEE--EEEeC-hhhHHHHHHHHHhcCcCCCceEEcCCCch--HHHHHHH
Confidence 35555554 3579999999998876432 233 23322 12234444555544322224555543221 1222233
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
|++.. ...|+++++|+|.=+-++++|+.|++.
T Consensus 91 gl~~~--~~~d~vli~~~d~P~i~~~~i~~li~~ 122 (230)
T PRK13385 91 GLDRI--GNEDVILVHDGARPFLTQDIIDRLLEG 122 (230)
T ss_pred HHHhc--cCCCeEEEccCCCCCCCHHHHHHHHHH
Confidence 33322 246899999999977779999999973
No 183
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=55.37 E-value=23 Score=30.72 Aligned_cols=51 Identities=6% Similarity=-0.012 Sum_probs=30.3
Q ss_pred eeeeEEeeehhhHhhcccc--cccccCCCchhHHHHHHHHHcCeeEEEecccceE
Q psy14856 456 YITNCYLMKTSVIKATNIK--TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYG 508 (734)
Q Consensus 456 ~v~~~~LI~~~vL~~~~~~--~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G 508 (734)
++++++.|+++.+.+ ... ..|..+. .||.+|+.|++++|+.+.-.....+.
T Consensus 19 ~~Gg~~~~~~~~f~~-vnGfde~f~gWG-~ED~Dl~~Rl~~~g~~~~~~~~~~~~ 71 (78)
T PF02709_consen 19 FFGGVFAISREDFEK-VNGFDERFWGWG-GEDDDLYNRLWKAGLKIVRVPGSIGR 71 (78)
T ss_dssp ---SEEEEEHHHHHH-TTSS-SS-TSCS-SHHHHHHHHHHHTT---B-SSTTTTE
T ss_pred eeEEEEEEeHHHHHH-cCCCCccccccC-ccHHHHHHHHHHcCCeEEecCCceEE
Confidence 345678899999887 322 3444333 49999999999999987665544443
No 184
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=55.30 E-value=39 Score=37.37 Aligned_cols=83 Identities=20% Similarity=0.269 Sum_probs=55.3
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
...+.+|-|- .+-.+++|+|.+.+|+..- + + +.||+.-...+ -.-+.|.+|..||.-|.+.
T Consensus 191 ~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~q--d---~-~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~ 264 (337)
T PLN02639 191 HMAVNYYPPCPEPELTYGLPAHTDPNALTILLQ--D---Q-QVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRY 264 (337)
T ss_pred EEEEEcCCCCCCcccccCCCCCcCCCceEEEEe--c---C-CcCceEeecCCeEEeccCCCCeEEEechhHHHHHhCCee
Confidence 4556777553 3456889999999998652 2 1 23566664321 1224588999998877431
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+........||-+..|++|
T Consensus 265 kSt~HRVv~~~~~~R~Sia~F~~p 288 (337)
T PLN02639 265 KSVWHRAVVNTDKERMSVASFLCP 288 (337)
T ss_pred eccCcccccCCCCCEEEEEEEecC
Confidence 2688865555789999999987
No 185
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=55.21 E-value=91 Score=35.37 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|+..++++.+... +++.+.+.. ..+.+.+++.+.. ..+.++...+..|.+.+-..|++... ...|++
T Consensus 33 kpli~~~l~~l~~~gi--~~ivvv~~~----~~~~i~~~~~~~~---~~~~~~~~~~~~G~~~sl~~a~~~l~-~~~~~~ 102 (446)
T PRK14353 33 RPMLAHVLAAAASLGP--SRVAVVVGP----GAEAVAAAAAKIA---PDAEIFVQKERLGTAHAVLAAREALA-GGYGDV 102 (446)
T ss_pred chHHHHHHHHHHhCCC--CcEEEEECC----CHHHHHHHhhccC---CCceEEEcCCCCCcHHHHHHHHHHHh-ccCCCE
Confidence 4999999999998753 344333321 2244455554321 23444444445555555555554432 235788
Q ss_pred EEECCCc-cCCChHHHHHHHH
Q psy14856 383 FYVDSDS-HLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~-~L~np~tL~~LI~ 402 (734)
+++++|. +++ ++.++.|++
T Consensus 103 lv~~~D~P~i~-~~~l~~l~~ 122 (446)
T PRK14353 103 LVLYGDTPLIT-AETLARLRE 122 (446)
T ss_pred EEEeCCcccCC-HHHHHHHHH
Confidence 9999998 665 999999997
No 186
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=55.17 E-value=87 Score=35.86 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=74.0
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
+++|+|+=-+.=+ |.|+..+++..+|.-. ++.+.+ -+-.+.+++-+.+. ..+.++..++.+|-+.|-
T Consensus 18 S~lPKVLH~vaGk---pMl~hVi~~a~~l~~~--~i~vVv----Gh~ae~V~~~~~~~----~~v~~v~Q~eqlGTgHAV 84 (460)
T COG1207 18 SDLPKVLHPVAGK---PMLEHVIDAARALGPD--DIVVVV----GHGAEQVREALAER----DDVEFVLQEEQLGTGHAV 84 (460)
T ss_pred CCCcccchhccCc---cHHHHHHHHHhhcCcc--eEEEEE----cCCHHHHHHHhccc----cCceEEEecccCChHHHH
Confidence 4678887655544 8999999999998844 465655 23445555444322 257888888899999999
Q ss_pred HHHHHhhhhcCcc-EEEEECCCccCCChHHHHHHHHcC
Q psy14856 368 NLAVENSLHKGVD-FYFYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 368 N~al~~a~~~~~D-Ylf~vDAD~~L~np~tL~~LI~~n 404 (734)
.+|++.-.+ ..+ .++.+-.|+=|-.++||+.|++..
T Consensus 85 ~~a~~~l~~-~~~g~vLVl~GD~PLit~~TL~~L~~~~ 121 (460)
T COG1207 85 LQALPALAD-DYDGDVLVLYGDVPLITAETLEELLAAH 121 (460)
T ss_pred Hhhhhhhhc-CCCCcEEEEeCCcccCCHHHHHHHHHhh
Confidence 999876422 334 788899999766799999999754
No 187
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=55.12 E-value=33 Score=38.10 Aligned_cols=82 Identities=20% Similarity=0.310 Sum_probs=56.4
Q ss_pred eeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc---------
Q psy14856 647 SFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT--------- 712 (734)
Q Consensus 647 ~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt--------- 712 (734)
..+.+|-| +.+-.+++|+|.+.+|+...=+ +.||+.....+ =.-+.|.+|..||.-|.+-
T Consensus 205 lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~------~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~k 278 (348)
T PLN00417 205 TRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDK------DVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYK 278 (348)
T ss_pred eeeeecCCCCCcccccCCcCccCCCceEEEEecC------CCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeec
Confidence 46677754 3455788999999999765321 24567764322 1124578899999888531
Q ss_pred -cccCcccCCceeEEEEEeeeCC
Q psy14856 713 -HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 -h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+...-..+.||-+.-|++|
T Consensus 279 St~HRVv~~~~~~R~Si~fF~~P 301 (348)
T PLN00417 279 SPVHRVVTNREKERISVATFCIP 301 (348)
T ss_pred ccceEEecCCCCCEEEEEEEecC
Confidence 1588876666789999999987
No 188
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=54.55 E-value=44 Score=34.06 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=58.8
Q ss_pred CCcEEEEEeecCCCchHHHHHHHHHHcCCcc---eeeccCcc-----------cCCCC---CCCCCccchHHHHHHHHhh
Q psy14856 31 EDKFLVITVASNETDGYKRFIQSAEVNKLQV---KTLGLHQP-----------WLGGD---MSSLGGGYKVNLLKNELDE 93 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~~r~~~Sa~~~~y~~---~vlg~g~~-----------W~gg~---~~~~ggg~Ki~~l~~~L~~ 93 (734)
.+++-|+.++-++...+.+.++|.....++. +++-.... +.... -......-|...+...++.
T Consensus 28 ~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~i~~~~~~g~~~a~n~gi~~ 107 (251)
T cd06439 28 LPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKLLRFPERRGKAAALNRALAL 107 (251)
T ss_pred CCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEEEEcCCCCChHHHHHHHHHH
Confidence 5778899999998899999999987777753 44422211 11100 0011112245556666665
Q ss_pred cCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEc
Q psy14856 94 MDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFG 133 (734)
Q Consensus 94 ~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfs 133 (734)
.. .| +|+|.|+-+++--.-.+.+++.+.+.+..++.+
T Consensus 108 a~--~d-~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~ 144 (251)
T cd06439 108 AT--GE-IVVFTDANALLDPDALRLLVRHFADPSVGAVSG 144 (251)
T ss_pred cC--CC-EEEEEccccCcCHHHHHHHHHHhcCCCccEEEe
Confidence 43 34 999999966654222477777776544444443
No 189
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=54.53 E-value=66 Score=31.89 Aligned_cols=79 Identities=20% Similarity=0.323 Sum_probs=42.1
Q ss_pred CCcceeEEEEcCCCCCCCCccccCCce-----EEEEEecCCCCcCCCccEEEeec----cceeecccceeEEEeCCCc-c
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHDSSTY-----TINIALNQVGVDYEGGGCRFIRY----NCNVTATRMGWMLMHPGRL-T 712 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D~S~~-----T~ni~Ln~~~~dfeGGg~~F~~~----~~~v~~~~~G~al~h~g~l-t 712 (734)
......+-.|+++. .+.+|.|+.++ -+.|+|+... .| .|... .+.....+.|.+++..|.- .
T Consensus 95 ~~n~~liN~Y~~g~--~i~~H~D~~~~~~~~~I~slSLG~~~-~~-----~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~ 166 (194)
T PF13532_consen 95 RPNQCLINYYRDGS--GIGPHSDDEEYGFGPPIASLSLGSSR-VF-----RFRNKSDDDEPIEVPLPPGSLLVMSGEARY 166 (194)
T ss_dssp --SEEEEEEESSTT---EEEE---TTC-CCSEEEEEEEES-E-EE-----EEEECGGTS-EEEEEE-TTEEEEEETTHHH
T ss_pred CCCEEEEEecCCCC--CcCCCCCcccccCCCcEEEEEEccCc-eE-----EEeeccCCCccEEEEcCCCCEEEeChHHhh
Confidence 45667888999877 79999998754 4666665421 22 33221 1122336789999887642 2
Q ss_pred cccCcccCCce---------eEEEEE
Q psy14856 713 HYHEGLQVTQG---------TRYIMI 729 (734)
Q Consensus 713 h~H~g~~vT~G---------~Ryilv 729 (734)
++|+-.++..+ .|.+|.
T Consensus 167 ~~H~I~~~~~~~~~~~~~~~~RislT 192 (194)
T PF13532_consen 167 DWHGIPPVKKDTHPSHYVRGRRISLT 192 (194)
T ss_dssp HEEEE-S-SCEEEESTEE-S-EEEEE
T ss_pred heeEcccccCCccccccCCCCEEEEE
Confidence 34888888775 576664
No 190
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=54.43 E-value=33 Score=33.82 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=49.9
Q ss_pred CCcceeEEEEcCCCCCCCCccccCCc--eEEEEEecCCCCcCCCccEEEeeccceeecccceeEEEeCCCcccccCcccC
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHDSST--YTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQV 720 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D~S~--~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G~al~h~g~lth~H~g~~v 720 (734)
.....++.+-.|+. .+.||+|.+. +++-+.|-.+ -+++.|.--+ ..+.-+.|.+++|-.+. .|++.--
T Consensus 78 ~~~~~~~s~l~pg~--~I~pH~d~~~~~lR~Hl~L~~p-----~~~~~~~v~~-~~~~w~~G~~~~fD~s~--~H~~~N~ 147 (163)
T PF05118_consen 78 PLGRVRFSRLPPGT--HIKPHRDPTNLRLRLHLPLIVP-----NPGCYIRVGG-ETRHWREGECWVFDDSF--EHEVWNN 147 (163)
T ss_dssp TCEEEEEEEEECTE--EEEEE-SS-TTEEEEEEEEC-------STTEEEEETT-EEEB--CTEEEEE-TTS---EEEEES
T ss_pred chhhEEEEEECCCC--EECCeeCCCCcceEEEEEEEcC-----CCCeEEEECC-eEEEeccCcEEEEeCCE--EEEEEeC
Confidence 45567777777776 4999999876 4455555542 2456664333 34557899999999985 7999999
Q ss_pred CceeEEEEEe
Q psy14856 721 TQGTRYIMIS 730 (734)
Q Consensus 721 T~G~Ryilv~ 730 (734)
....|.+|+.
T Consensus 148 ~~~~Rv~L~v 157 (163)
T PF05118_consen 148 GDEDRVVLIV 157 (163)
T ss_dssp SSS-EEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999974
No 191
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=53.98 E-value=82 Score=35.60 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+.... ++.+ ..+.+ .+.+++.+.+. .++++...+..|.+.+-..|++... ..|++
T Consensus 28 kpli~~~l~~l~~~g~~--~iii--v~~~~--~~~i~~~~~~~-----~i~~~~~~~~~G~~~ai~~a~~~l~--~~~~~ 94 (451)
T TIGR01173 28 KPMLEHVIDAARALGPQ--KIHV--VYGHG--AEQVRKALANR-----DVNWVLQAEQLGTGHAVLQALPFLP--DDGDV 94 (451)
T ss_pred ccHHHHHHHHHHhCCCC--eEEE--EECCC--HHHHHHHhcCC-----CcEEEEcCCCCchHHHHHHHHHhcC--CCCcE
Confidence 59999999999987643 3433 22222 23455554332 3555554445565555555554431 34799
Q ss_pred EEECCCc-cCCChHHHHHHHHc
Q psy14856 383 FYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~vDAD~-~L~np~tL~~LI~~ 403 (734)
+++++|. +++ ++.++.|++.
T Consensus 95 lv~~~D~p~i~-~~~~~~l~~~ 115 (451)
T TIGR01173 95 LVLYGDVPLIS-AETLERLLEA 115 (451)
T ss_pred EEEECCcCCcC-HHHHHHHHHH
Confidence 9999998 565 9999999974
No 192
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=53.90 E-value=97 Score=35.24 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=55.6
Q ss_pred EecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhc
Q psy14856 298 FIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHK 377 (734)
Q Consensus 298 ~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~ 377 (734)
++-+. |.|...++++.+... +++.+.+ . +..+.+++++.. .+.++...+..+.+.+-..|++... .
T Consensus 26 ~i~Gk-pli~~~l~~l~~~gi--~~iivvv-~---~~~~~i~~~~~~------~~~~~~~~~~~g~~~al~~a~~~l~-~ 91 (458)
T PRK14354 26 KVCGK-PMVEHVVDSVKKAGI--DKIVTVV-G---HGAEEVKEVLGD------RSEFALQEEQLGTGHAVMQAEEFLA-D 91 (458)
T ss_pred EeCCc-cHHHHHHHHHHhCCC--CeEEEEe-C---CCHHHHHHHhcC------CcEEEEcCCCCCHHHHHHHHHHHhc-c
Confidence 34454 999999999987543 3443333 2 222445544422 2344544555666665555655431 2
Q ss_pred CccEEEEECCCc-cCCChHHHHHHHHc
Q psy14856 378 GVDFYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 378 ~~DYlf~vDAD~-~L~np~tL~~LI~~ 403 (734)
..|+++++++|. +++ ++.|+.|++.
T Consensus 92 ~~d~vlv~~~D~p~i~-~~~l~~li~~ 117 (458)
T PRK14354 92 KEGTTLVICGDTPLIT-AETLKNLIDF 117 (458)
T ss_pred cCCeEEEEECCccccC-HHHHHHHHHH
Confidence 248999999998 565 9999999974
No 193
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=53.19 E-value=1.7e+02 Score=30.76 Aligned_cols=82 Identities=16% Similarity=0.210 Sum_probs=46.5
Q ss_pred CcEEEEEEecCC---hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC----CCCcH
Q psy14856 291 PSVLISVFIDKP---TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN----STVNS 363 (734)
Q Consensus 291 P~V~I~I~i~n~---~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~----~~~g~ 363 (734)
|.|.++.|.|.. ...|-+.-+.|.... .++-+|..........+.+++++.+-.|..+..-.+. .....
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lVp----~l~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~~~~~~~~~~rg 76 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLVP----PLHWIVVEDSEEKTPLVAELLRRSGLMYTHLNAKTPSDPTWLKPRG 76 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcCC----ceEEEEEeCCCCCCHHHHHHHHHcCCceEEeccCCCCCcccCCccc
Confidence 567777787765 344455555555553 3654444422344566778888888766554332221 01112
Q ss_pred HHHHHHHHHhhhh
Q psy14856 364 KEARNLAVENSLH 376 (734)
Q Consensus 364 a~arN~al~~a~~ 376 (734)
..-||.||+.-++
T Consensus 77 ~~qRn~AL~~ir~ 89 (223)
T cd00218 77 VEQRNLALRWIRE 89 (223)
T ss_pred HHHHHHHHHHHHh
Confidence 4569999987765
No 194
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=53.06 E-value=34 Score=37.28 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=53.2
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc-eeecccce-eEEEeCCCcc-------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC-NVTATRMG-WMLMHPGRLT------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~-~v~~~~~G-~al~h~g~lt------- 712 (734)
..++.+|-|- .+..+++|+|.+.+|+...-+ +-||+...+.+- .-..|.+| ..||.-|.+-
T Consensus 154 ~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~------~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~ 227 (303)
T PLN02403 154 GTKVAKYPECPRPELVRGLREHTDAGGIILLLQDD------QVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGR 227 (303)
T ss_pred eeeeEcCCCCCCcccccCccCccCCCeEEEEEecC------CCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCe
Confidence 4567888553 334588999999999876332 234566532211 11335564 5666655421
Q ss_pred ---cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ---HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ---h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+......+.||-+.-|++|
T Consensus 228 ~~S~~HRVv~~~~~~R~Si~~F~~p 252 (303)
T PLN02403 228 YKSTLHRVMADKNGSRLSIATFYNP 252 (303)
T ss_pred eecccceeecCCCCCEEEEEEEEcC
Confidence 1588887667789999999988
No 195
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=52.67 E-value=1e+02 Score=32.18 Aligned_cols=103 Identities=16% Similarity=0.323 Sum_probs=59.0
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcc-cCCCceEEEEEecCCCCcHHHHHHHHHHhccCc-ceEEEEeCCCCCcHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANL-NYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMF-KNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~L-dYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y-~~V~ii~~~~~~g~a~a 366 (734)
..|+.++- +-+. |.|...|++|.++ .- .++.+++ . +..+.+.+++....... ..+.++...+..|-+.|
T Consensus 20 ~~PK~llp--v~g~-plI~~~l~~l~~~~gi--~~i~iv~-~---~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~Gt~~a 90 (257)
T cd06428 20 DVPKPLFP--VAGK-PMIHHHIEACAKVPDL--KEVLLIG-F---YPESVFSDFISDAQQEFNVPIRYLQEYKPLGTAGG 90 (257)
T ss_pred CCCcccCe--ECCe-eHHHHHHHHHHhcCCC--cEEEEEe-c---CCHHHHHHHHHhcccccCceEEEecCCccCCcHHH
Confidence 45666444 4555 9999999999975 33 2343322 2 23455666654432111 13444444455666666
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
-..|.+.......|+++++.+|.+.+ - .++.+++
T Consensus 91 l~~a~~~l~~~~~~~~lv~~gD~~~~-~-dl~~~~~ 124 (257)
T cd06428 91 LYHFRDQILAGNPSAFFVLNADVCCD-F-PLQELLE 124 (257)
T ss_pred HHHHHHHhhccCCCCEEEEcCCeecC-C-CHHHHHH
Confidence 55555543223357899999999863 4 3666665
No 196
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=52.41 E-value=1.4e+02 Score=30.60 Aligned_cols=89 Identities=10% Similarity=0.184 Sum_probs=52.2
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..+.|+..++.+.+..... + ++|..+.+.-.+.+.+++... .++++........+ .++.......+|+
T Consensus 23 Gkpli~~~i~~l~~~~~~~-~--ivVv~~~~~~~~~i~~~~~~~-----~v~~v~~~~~~~l~----~~~~~~~~~~~d~ 90 (233)
T cd02518 23 GKPLLEHLLDRLKRSKLID-E--IVIATSTNEEDDPLEALAKKL-----GVKVFRGSEEDVLG----RYYQAAEEYNADV 90 (233)
T ss_pred CccHHHHHHHHHHhCCCCC-e--EEEECCCCcccHHHHHHHHHc-----CCeEEECCchhHHH----HHHHHHHHcCCCE
Confidence 3689999999998765332 3 334433222113444554432 35556544321111 1111111246899
Q ss_pred EEEECCCccCCChHHHHHHHH
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~ 402 (734)
++++++|.=+-++++++.|++
T Consensus 91 vli~~~D~P~i~~~~i~~li~ 111 (233)
T cd02518 91 VVRITGDCPLIDPEIIDAVIR 111 (233)
T ss_pred EEEeCCCCCCCCHHHHHHHHH
Confidence 999999997777999999997
No 197
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=52.21 E-value=1.1e+02 Score=30.60 Aligned_cols=104 Identities=7% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhcc---C--cceEEEEeC------
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKT---M--FKNVKYIAH------ 357 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~---~--y~~V~ii~~------ 357 (734)
..|+.++ |+-+..|.|...++++.+..- +++.+.+ + +..+.+.+.+.+... . -..++++..
T Consensus 18 ~~pK~ll--pv~g~~pli~~~l~~l~~~gi--~~iivv~--~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (200)
T cd02508 18 KRAKPAV--PFGGRYRLIDFPLSNMVNSGI--RNVGVLT--Q--YKSRSLNDHLGSGKEWDLDRKNGGLFILPPQQRKGG 89 (200)
T ss_pred CCcceee--EECCeeeeHHHHHHHHHHCCC--CEEEEEe--C--CChHHHHHHHhCCCcccCCCCCCCEEEeCcccCCCC
Confidence 3566644 444545899999999998643 3443333 2 223444444432110 0 113455542
Q ss_pred CCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 358 NSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 358 ~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
++..|-+.|-..|++.......|.++++-+|.+. +..++.+++
T Consensus 90 ~~~~Gta~al~~a~~~i~~~~~~~~lv~~gD~v~--~~~~~~~l~ 132 (200)
T cd02508 90 DWYRGTADAIYQNLDYIERSDPEYVLILSGDHIY--NMDYREMLD 132 (200)
T ss_pred CcccCcHHHHHHHHHHHHhCCCCEEEEecCCEEE--ecCHHHHHH
Confidence 3345667777677665433345888999999954 456777775
No 198
>PF05762 VWA_CoxE: VWA domain containing CoxE-like protein; InterPro: IPR008912 This group of proteins contains a VWA type domain and the function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon in several bacteria [].
Probab=51.01 E-value=21 Score=36.97 Aligned_cols=64 Identities=19% Similarity=0.436 Sum_probs=46.9
Q ss_pred CCccchH-HHHHHHHhhcCCC---CCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEcc--CCcccCC
Q psy14856 78 LGGGYKV-NLLKNELDEMDIT---DDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGA--ERLCWPD 141 (734)
Q Consensus 78 ~ggg~Ki-~~l~~~L~~~~~~---~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsa--e~~cwP~ 141 (734)
-|||..+ ..|+.+++.+..+ ...||+++|++|.--..+..+.+++-.+-+.+|++=+ +..=||.
T Consensus 126 ~~GgTdi~~aL~~~~~~~~~~~~~~t~vvIiSDg~~~~~~~~~~~~l~~l~~r~~rviwLnP~~~~~~~~ 195 (222)
T PF05762_consen 126 FGGGTDIGQALREFLRQYARPDLRRTTVVIISDGWDTNDPEPLAEELRRLRRRGRRVIWLNPLPRAGWPG 195 (222)
T ss_pred CCCccHHHHHHHHHHHHhhcccccCcEEEEEecccccCChHHHHHHHHHHHHhCCEEEEECCcccccCCC
Confidence 3566676 4677777776522 3469999999998888888888899988899988744 2345654
No 199
>KOG0143|consensus
Probab=50.75 E-value=31 Score=37.96 Aligned_cols=82 Identities=22% Similarity=0.243 Sum_probs=58.0
Q ss_pred ceeEEEEc----CCCCCCCCccccCCceEEEEEecCCCCcCCCccEEEee-c--cceeecccceeEEEeCCCcc------
Q psy14856 646 MSFVVRYR----PDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIR-Y--NCNVTATRMGWMLMHPGRLT------ 712 (734)
Q Consensus 646 ~~fvvrY~----~~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~-~--~~~v~~~~~G~al~h~g~lt------ 712 (734)
..++.+|. |+.--++++|.|.|-+|+.+.-+ +=||+.... . -..| .|.+|.-||.-|..-
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~------~V~GLQv~~~dg~Wi~V-~P~p~a~vVNiGD~l~~lSNG 249 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDD------DVGGLQVFTKDGKWIDV-PPIPGAFVVNIGDMLQILSNG 249 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcCceEEEEccC------CcCceEEEecCCeEEEC-CCCCCCEEEEcccHHhHhhCC
Confidence 44577775 45667789999999988877443 335666653 2 2233 477788888876421
Q ss_pred ----cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ----HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ----h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+++.-..+.||-+..|+.|
T Consensus 250 ~ykSv~HRV~~n~~~~R~Sia~F~~p 275 (322)
T KOG0143|consen 250 RYKSVLHRVVVNGEKERISVAFFVFP 275 (322)
T ss_pred cccceEEEEEeCCCCceEEEEEEecC
Confidence 1499999888999999999986
No 200
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=50.42 E-value=1.5e+02 Score=30.41 Aligned_cols=90 Identities=11% Similarity=0.199 Sum_probs=51.0
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
+..|.|...++.|.+.. -+++ +|..+ + +.+.+++.+.+ ..+.+...+...+.+.+.. ++........|
T Consensus 25 ~Gkpll~~~l~~l~~~~--i~~i--vvv~~---~-~~i~~~~~~~~---~~v~~~~~~~~~gt~~~~~-~~~~~~~~~~~ 92 (245)
T PRK05450 25 GGKPMIVRVYERASKAG--ADRV--VVATD---D-ERIADAVEAFG---GEVVMTSPDHPSGTDRIAE-AAAKLGLADDD 92 (245)
T ss_pred CCcCHHHHHHHHHHhcC--CCeE--EEECC---c-HHHHHHHHHcC---CEEEECCCcCCCchHHHHH-HHHhcCCCCCC
Confidence 34799999999999872 2333 23322 2 34555554432 1232222233334333332 22221113468
Q ss_pred EEEEECCCc-cCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~-~L~np~tL~~LI~~ 403 (734)
+++++++|. +++ +++|+.|++.
T Consensus 93 ~vlv~~~D~Pli~-~~~l~~li~~ 115 (245)
T PRK05450 93 IVVNVQGDEPLIP-PEIIDQVAEP 115 (245)
T ss_pred EEEEecCCCCCCC-HHHHHHHHHH
Confidence 999999999 676 9999999973
No 201
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=50.13 E-value=1.1e+02 Score=34.77 Aligned_cols=89 Identities=15% Similarity=0.181 Sum_probs=55.9
Q ss_pred EecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhc
Q psy14856 298 FIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHK 377 (734)
Q Consensus 298 ~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~ 377 (734)
++-+. |.|...|+++.+. - +++.+.+ +. ..+.++++... .+.++..++..|-+.+-..|+++..
T Consensus 24 ~v~gk-pli~~~l~~l~~~--~-~~i~vv~--~~--~~~~i~~~~~~------~~~~~~~~~~~g~~~ai~~a~~~l~-- 87 (448)
T PRK14357 24 KISGK-PMINWVIDTAKKV--A-QKVGVVL--GH--EAELVKKLLPE------WVKIFLQEEQLGTAHAVMCARDFIE-- 87 (448)
T ss_pred EECCe-eHHHHHHHHHHhc--C-CcEEEEe--CC--CHHHHHHhccc------ccEEEecCCCCChHHHHHHHHHhcC--
Confidence 44444 9999999999985 2 4443333 22 22455544421 2444545555666666666665532
Q ss_pred CccEEEEECCCc-cCCChHHHHHHHHc
Q psy14856 378 GVDFYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 378 ~~DYlf~vDAD~-~L~np~tL~~LI~~ 403 (734)
..|+++++++|. +++ +..++.|++.
T Consensus 88 ~~~~vlv~~gD~p~i~-~~~i~~l~~~ 113 (448)
T PRK14357 88 PGDDLLILYGDVPLIS-ENTLKRLIEE 113 (448)
T ss_pred cCCeEEEEeCCcccCC-HHHHHHHHHH
Confidence 358999999998 565 8888888863
No 202
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=48.69 E-value=51 Score=36.81 Aligned_cols=83 Identities=19% Similarity=0.175 Sum_probs=54.0
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
..++.+|-+ +..-.+.+|+|-+.+|+...=+ .-||+.....+ =.-+.+.+|..||.-|.+.
T Consensus 214 ~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~------~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~ 287 (362)
T PLN02393 214 CLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDD------NVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIY 287 (362)
T ss_pred eeeeeecCCCCCcccccccccccCCceEEEEeeCC------CCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCee
Confidence 455677743 2345688999999999865422 22556554221 1123578888888877531
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+...-....||-+..|++|
T Consensus 288 kSt~HRVv~~~~~~R~SiafF~~P 311 (362)
T PLN02393 288 KSVEHRVIVNSAKERVSLAFFYNP 311 (362)
T ss_pred eccceecccCCCCCEEEEEEEecC
Confidence 1588865445579999999988
No 203
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=47.46 E-value=56 Score=36.50 Aligned_cols=84 Identities=19% Similarity=0.232 Sum_probs=54.7
Q ss_pred ceeEEEEcC----CCCCCCCccccCCceEEEEEecCCCCcCCCccEEEeeccc-eeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRP----DEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC-NVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~----~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~-~v~~~~~G~al~h~g~lt-------- 712 (734)
..++.+|-+ +..-.+.+|+|.+.+|+..-=+. +-||+.....+. .-+.|.+|..||.-|.+-
T Consensus 212 ~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~-----~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~ 286 (361)
T PLN02758 212 AVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKG-----SCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKY 286 (361)
T ss_pred eeeeecCCCCCCcccccCccCccCCceeEEEEeCCC-----CCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCee
Confidence 345666743 34456889999999998763110 124666643221 124578899998888431
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-+|+...-....||-+..|+.|
T Consensus 287 kS~~HRVv~~~~~~R~Sia~F~~P 310 (361)
T PLN02758 287 KSVEHRAVTNKEKDRLSIVTFYAP 310 (361)
T ss_pred ecccceeecCCCCCEEEEEEEecC
Confidence 2588875545679999999987
No 204
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=47.29 E-value=1.3e+02 Score=30.44 Aligned_cols=97 Identities=15% Similarity=0.197 Sum_probs=56.4
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEE--eCC-CCCcHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYI--AHN-STVNSKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii--~~~-~~~g~a~ 365 (734)
..|+-++-+ -+ .+.|+..|++|.+..-.+ + +|.. .+..+.+.+++.. .+..+++. ... +..|-+.
T Consensus 19 ~~pK~llpi--~g-~~li~~~l~~l~~~gi~~--i--~iv~--~~~~~~i~~~~~~---~~~~~~i~~~~~~~~~~g~~~ 86 (221)
T cd06422 19 TRPKPLVPV--AG-KPLIDHALDRLAAAGIRR--I--VVNT--HHLADQIEAHLGD---SRFGLRITISDEPDELLETGG 86 (221)
T ss_pred CCCCceeeE--CC-EEHHHHHHHHHHHCCCCE--E--EEEc--cCCHHHHHHHHhc---ccCCceEEEecCCCcccccHH
Confidence 345554444 34 499999999999876443 3 2322 2344555666544 11234433 222 3345555
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
+-..|++.. ..|+++++.+|.+.. .+..+.+.
T Consensus 87 ~l~~~~~~~---~~~~~lv~~~D~i~~-~~~~~~~~ 118 (221)
T cd06422 87 GIKKALPLL---GDEPFLVVNGDILWD-GDLAPLLL 118 (221)
T ss_pred HHHHHHHhc---CCCCEEEEeCCeeeC-CCHHHHHH
Confidence 555555543 338899999999885 77555444
No 205
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=47.06 E-value=1.5e+02 Score=29.49 Aligned_cols=89 Identities=20% Similarity=0.260 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+..- .++ +|.. ++..+.+++++.+....-..+.+....+..|.+.+--.|++.. ..|.+
T Consensus 29 ~pli~~~l~~l~~~g~--~~v--~vv~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~~~---~~~~~ 99 (223)
T cd06915 29 RPFLEYLLEYLARQGI--SRI--VLSV--GYLAEQIEEYFGDGYRGGIRIYYVIEPEPLGTGGAIKNALPKL---PEDQF 99 (223)
T ss_pred cchHHHHHHHHHHCCC--CEE--EEEc--ccCHHHHHHHHcCccccCceEEEEECCCCCcchHHHHHHHhhc---CCCCE
Confidence 5999999999998642 233 3332 2333445555543210001344444455566665555555543 46889
Q ss_pred EEECCCccCCChHHHHHHHH
Q psy14856 383 FYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~ 402 (734)
+++.+|..+. ++ +..+++
T Consensus 100 lv~~~D~~~~-~~-~~~~l~ 117 (223)
T cd06915 100 LVLNGDTYFD-VD-LLALLA 117 (223)
T ss_pred EEEECCcccC-CC-HHHHHH
Confidence 9999999874 55 555554
No 206
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed
Probab=46.85 E-value=3.2e+02 Score=27.77 Aligned_cols=99 Identities=13% Similarity=0.151 Sum_probs=53.7
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
|+.++-+ +..|.|...++++.+.... +++ +|..+.+.-.++.+.+.. ....+.++.... +...+-..|
T Consensus 22 ~K~l~~~---~g~pli~~~l~~l~~~~~~-~~i--vvv~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~sv~~~ 89 (227)
T PRK00155 22 PKQYLPL---GGKPILEHTLEAFLAHPRI-DEI--IVVVPPDDRPDFAELLLA----KDPKVTVVAGGA--ERQDSVLNG 89 (227)
T ss_pred CceeeEE---CCEEHHHHHHHHHHcCCCC-CEE--EEEeChHHHHHHHHHhhc----cCCceEEeCCcc--hHHHHHHHH
Confidence 4544443 3579999999999876432 344 333221111122222211 112344543321 222333333
Q ss_pred HHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 371 VENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 371 l~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
++.. .+.|+++++|+|.=+-.+++++.|++.
T Consensus 90 l~~~--~~~d~vlv~~~D~P~i~~~~i~~li~~ 120 (227)
T PRK00155 90 LQAL--PDDDWVLVHDAARPFLTPDDIDRLIEA 120 (227)
T ss_pred HHhC--CCCCEEEEccCccCCCCHHHHHHHHHH
Confidence 3322 257999999999866569999999973
No 207
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=45.98 E-value=1.6e+02 Score=30.40 Aligned_cols=105 Identities=16% Similarity=0.312 Sum_probs=54.6
Q ss_pred EEEEEEecC-ChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCC-----cHHH
Q psy14856 293 VLISVFIDK-PTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTV-----NSKE 365 (734)
Q Consensus 293 V~I~I~i~n-~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~-----g~a~ 365 (734)
|..+|.++. +.+.+...+..|- .|...+.|.|+. +.+...+.++++. ..+++|.++...... +..+
T Consensus 1 iAylil~h~~~~~~~~~l~~~l~---~~~~~f~iHiD~k~~~~~~~~~~~~~----~~~~nv~~v~~r~~v~WG~~S~v~ 73 (244)
T PF02485_consen 1 IAYLILAHKNDPEQLERLLRLLY---HPDNDFYIHIDKKSPDYFYEEIKKLI----SCFPNVHFVPKRVDVRWGGFSLVE 73 (244)
T ss_dssp EEEEEEESS--HHHHHHHHHHH-----TTSEEEEEE-TTS-HHHHHHHHHHH----CT-TTEEE-SS-----TTSHHHHH
T ss_pred CEEEEEecCCCHHHHHHHHHHhc---CCCCEEEEEEcCCCChHHHHHHHHhc----ccCCceeecccccccccCCccHHH
Confidence 456788865 7777666666554 677777777765 3333344444443 345678887533221 2345
Q ss_pred HHHHHHHhhhh--cCccEEEEECCCc-cCCChHHHHHHHHcC
Q psy14856 366 ARNLAVENSLH--KGVDFYFYVDSDS-HLDNPDVLKYLVNRN 404 (734)
Q Consensus 366 arN~al~~a~~--~~~DYlf~vDAD~-~L~np~tL~~LI~~n 404 (734)
|--.+++.|++ .+.||+.++..+. -|...+.|...++.+
T Consensus 74 A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~ 115 (244)
T PF02485_consen 74 ATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESN 115 (244)
T ss_dssp HHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhc
Confidence 66666776665 3678777665555 455456666666655
No 208
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes. This family includes UDP-Glucose Pyrophosphorylase (UDPase) and UDPGlcNAc pyrophosphorylase enzymes. The two enzymes share significant sequence and structure similarity. UDP-Glucose Pyrophosphorylase catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans . UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1P from PPi and UDPGlcNAc, which is a key precursor of N- and O-linked glycosylations and is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker anchoring a variety o
Probab=45.66 E-value=2.3e+02 Score=30.32 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=76.4
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccC-C--CceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-C-----
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNY-P--AKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-T----- 360 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdY-P--k~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~----- 360 (734)
.|+-++-|-.-+..++|+..+++|.++.- - ...|.++|-+| +.|.+.+++|++++......+.....+. .
T Consensus 18 ~PK~~~~i~~~~gk~~l~~~~~~i~~~~~~~~~~~~Ip~~imts-~~t~~~t~~~l~~~~~~~~~v~~f~Q~~~P~~~~~ 96 (266)
T cd04180 18 GPKSSTDVGLPSGQCFLQLIGEKILTLQEIDLYSCKIPEQLMNS-KYTHEKTQCYFEKINQKNSYVITFMQGKLPLKNDD 96 (266)
T ss_pred CCceeeeecCCCCCcHHHHHHHHHHHHHHHhhcCCCCCEEEEcC-chhHHHHHHHHHHcCCCCCceEEEEeCCceEEeCC
Confidence 46666555444668999999999998532 0 12355666666 4666667788888762122233221110 0
Q ss_pred -------C--------c----HHHHHHH-HHHhhhhcCccEEEEECCCccCC---ChHHHHHHHHcCCceeeecccC
Q psy14856 361 -------V--------N----SKEARNL-AVENSLHKGVDFYFYVDSDSHLD---NPDVLKYLVNRNESLIAPLLVR 414 (734)
Q Consensus 361 -------~--------g----~a~arN~-al~~a~~~~~DYlf~vDAD~~L~---np~tL~~LI~~nk~IVaP~l~~ 414 (734)
. | ....... .++.-++.+.+|+++..+|..+. ||..|-..+..+..++.-++.+
T Consensus 97 ~~~~~~~~~~~~~~P~GnGdi~~~L~~sglLd~l~~~G~~yi~v~~vDN~la~v~DP~~lG~~~~~~~~~~~kvv~K 173 (266)
T cd04180 97 DARDPHNKTKCHLFPCGHGDVVLALIHSGHLNKLLEKGYRYIHFIGVDNLLVKVADPLFIGIAIQNRKAINQKVVPK 173 (266)
T ss_pred CCcccCCCCceeeccCCcHHHHHHHHHCChHHHHHHcCCEEEEEEccCccCccccCHHHHHHHHHcCCCEEEEEEEC
Confidence 0 0 1223333 44555557899999999998664 5788888888887777766644
No 209
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2.7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....
Probab=44.88 E-value=2.1e+02 Score=28.69 Aligned_cols=89 Identities=13% Similarity=0.216 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+-.+... ++|.+++ +.+.+.+++++ ..|....++.. .....-..++..+.....|++
T Consensus 24 kpLi~~~i~~a~~s~~~d~---IvVaTd~----~~i~~~~~~~g---~~v~~~~~~~~-~~~~r~~~~~~~~~~~~~~~v 92 (217)
T PF02348_consen 24 KPLIEYVIERAKQSKLIDE---IVVATDD----EEIDDIAEEYG---AKVIFRRGSLA-DDTDRFIEAIKHFLADDEDIV 92 (217)
T ss_dssp EEHHHHHHHHHHHTTTTSE---EEEEESS----HHHHHHHHHTT---SEEEE--TTSS-SHHHHHHHHHHHHTCSTTSEE
T ss_pred ccHHHHHHHHHHhCCCCCe---EEEeCCC----HHHHHHHHHcC---CeeEEcChhhc-CCcccHHHHHHHhhhhHHhhc
Confidence 5899999999998887754 4454433 33445566665 35544544433 333333344444332245699
Q ss_pred EEECCCccCCChHHHHHHHH
Q psy14856 383 FYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~ 402 (734)
+.+.+|+-|-+|.++..+++
T Consensus 93 v~~~~d~Pll~~~~i~~~i~ 112 (217)
T PF02348_consen 93 VRLQGDSPLLDPTSIDRAIE 112 (217)
T ss_dssp EEESTTETT--HHHHHHHHH
T ss_pred cccCCeeeECCHHHHHHHHH
Confidence 99999998888999999886
No 210
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=44.29 E-value=17 Score=38.18 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=35.7
Q ss_pred HHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhc---CC
Q psy14856 51 IQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNT---FD 127 (734)
Q Consensus 51 ~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~---~~ 127 (734)
.+.|+.+||.+.+.-..+. ..++ .++.-.|+-+|+++|.++++ -+.|++.|+ |++|.-+--.|-+.+.+ .+
T Consensus 34 ~~Ya~~HgY~~~~~~~~~~-~~~~--~~~~W~K~~~lr~~m~~~P~--~~wv~~lD~-Dali~n~~~~L~~~il~p~~L~ 107 (239)
T PF05637_consen 34 VDYARRHGYDLYYRNIQEY-DDPE--RPGSWAKIPALRAAMKKYPE--AEWVWWLDS-DALIMNPDFSLEEHILSPSRLD 107 (239)
T ss_dssp HHHHHHHT-EEEEE-S--S---SH--HHHHHTHHHHHHHHHHH-TT---SEEEEE-T-TEEE------------------
T ss_pred HHHHHhcCCEEEEEChHHc-CCCC--CChhhHHHHHHHHHHHhCCC--CCEEEEEcC-CeEEEecccccccccccccccc
Confidence 4789999999987532221 1111 12345699999999999863 349999999 99998876555444442 22
Q ss_pred CcEEEccCCcccCCCcCcccC----CC-----CCCCCcccccceeeeeHHHHHH-HHHhc
Q psy14856 128 ANIVFGAERLCWPDTSLYDKY----PA-----VGSGYRYLNSGGFIGYAKDIKE-LISNR 177 (734)
Q Consensus 128 ~~ilfsae~~cwP~~~l~~~y----P~-----~~~g~R~LNSG~~iG~a~~l~~-l~~~~ 177 (734)
..++ -+.-.-|..+..+.+ +. ...+..-||+|.||=+...-.+ +++.|
T Consensus 108 ~~~~--r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w 165 (239)
T PF05637_consen 108 SLLL--RDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAW 165 (239)
T ss_dssp ------------------------------------------------------------
T ss_pred cccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2211 111112222111100 00 1134566999999988766543 44444
No 211
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=43.81 E-value=76 Score=33.34 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-------------CCc--HHHHHH
Q psy14856 304 AFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-------------TVN--SKEARN 368 (734)
Q Consensus 304 ~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-------------~~g--~a~arN 368 (734)
..|.+|++.-..+ =-+++.+++.++++...++|+.+.+. | .|+++.-.. ... ...+..
T Consensus 18 ~~l~e~ie~~~~~--G~~~~~~Y~~~~~~~~~~vL~~Y~~~-g----~v~~~~w~~~~~~~~~~~~~~~~~~~~~~~~q~ 90 (285)
T PF01697_consen 18 LQLIEWIEYHRLL--GVDHFYFYDNSSSPSVRKVLKEYERS-G----YVEVIPWPLRPKFPDFPSPFPDPNSSVERRGQI 90 (285)
T ss_pred HHHHHHHHHHHHh--CCCEEEEEEccCCHHHHHhHHHHhhc-C----eEEEEEcccccccCCcccchhhhhhHHHHHHHH
Confidence 3788899888877 45778888888888888888877754 2 455554320 001 112223
Q ss_pred HHHHhhhh---cCccEEEEECCCccCC
Q psy14856 369 LAVENSLH---KGVDFYFYVDSDSHLD 392 (734)
Q Consensus 369 ~al~~a~~---~~~DYlf~vDAD~~L~ 392 (734)
.|+..|+. ..++|+.|+|.|-++-
T Consensus 91 ~a~~DCl~r~~~~~~~v~f~DiDE~lv 117 (285)
T PF01697_consen 91 AAYNDCLLRYRYRAKWVAFIDIDEFLV 117 (285)
T ss_pred HHHHHHHHHhhhhceEEEEeccccEEE
Confidence 45555533 6789999999998775
No 212
>PRK05569 flavodoxin; Provisional
Probab=43.57 E-value=1.2e+02 Score=28.45 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=38.5
Q ss_pred CCCcEEEEEEecCCh----hHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhc
Q psy14856 289 QFPSVLISVFIDKPT----AFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFK 346 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~----~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~ 346 (734)
++-.|.++.|+|+.. +.+..|++.+..++.....+-+|-.. +.....+.+++++++.+
T Consensus 48 ~~d~iilgsPty~~~~~~~~~~~~~~~~l~~~~~~~K~v~~f~t~g~~~~~~~~~~~~~l~~~g 111 (141)
T PRK05569 48 EADAVAFGSPSMDNNNIEQEEMAPFLDQFKLTPNENKKCILFGSYGWDNGEFMKLWKDRMKDYG 111 (141)
T ss_pred hCCEEEEECCCcCCCcCChHHHHHHHHHhhccCcCCCEEEEEeCCCCCCCcHHHHHHHHHHHCC
Confidence 457899999998764 47899999998777555555343332 22334556677776554
No 213
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=43.42 E-value=16 Score=38.48 Aligned_cols=30 Identities=23% Similarity=0.519 Sum_probs=17.4
Q ss_pred HHHHHHhhhh--cCccEEEEECCCccCCChHH
Q psy14856 367 RNLAVENSLH--KGVDFYFYVDSDSHLDNPDV 396 (734)
Q Consensus 367 rN~al~~a~~--~~~DYlf~vDAD~~L~np~t 396 (734)
|=.+|..+++ ..+||++++|+|++++||+.
T Consensus 63 K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~ 94 (239)
T PF05637_consen 63 KIPALRAAMKKYPEAEWVWWLDSDALIMNPDF 94 (239)
T ss_dssp HHHHHHHHHHH-TT-SEEEEE-TTEEE-----
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCeEEEeccc
Confidence 4455555543 68999999999999998764
No 214
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=43.13 E-value=2.2e+02 Score=28.84 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=54.5
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+-++-+ -+ .+.|...++++.+... .++.+.+ +. ..+.+++++.+....--.+.++..++..|.+.+-..
T Consensus 21 ~pK~l~~i--~g-~~li~~~l~~l~~~~~--~~i~vv~--~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~sl~~ 91 (236)
T cd04189 21 RPKQLIPV--AG-KPIIQYAIEDLREAGI--EDIGIVV--GP--TGEEIKEALGDGSRFGVRITYILQEEPLGLAHAVLA 91 (236)
T ss_pred CCceeeEE--CC-cchHHHHHHHHHHCCC--CEEEEEc--CC--CHHHHHHHhcchhhcCCeEEEEECCCCCChHHHHHH
Confidence 45554443 34 4999999999998643 3443322 22 345555555432211114555655555565655555
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
|++... ..++ +++.+|.+++ ++..+ ++
T Consensus 92 a~~~i~--~~~~-li~~~D~~~~-~~~~~-~~ 118 (236)
T cd04189 92 ARDFLG--DEPF-VVYLGDNLIQ-EGISP-LV 118 (236)
T ss_pred HHHhcC--CCCE-EEEECCeecC-cCHHH-HH
Confidence 655432 3455 4588999885 66554 44
No 215
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=43.12 E-value=17 Score=44.05 Aligned_cols=55 Identities=16% Similarity=0.260 Sum_probs=43.8
Q ss_pred cCcceEEEEeCCCCCc-----HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 347 TMFKNVKYIAHNSTVN-----SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 347 ~~y~~V~ii~~~~~~g-----~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
..-+.+.++..|++.+ +|.|.|..+... .-.++.|++-+|+|-...||+++++-+
T Consensus 163 ~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~am 223 (720)
T PF03552_consen 163 NELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAM 223 (720)
T ss_pred CcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHH
Confidence 3467888888888765 577777766532 337999999999999999999999877
No 216
>KOG4748|consensus
Probab=42.97 E-value=85 Score=35.16 Aligned_cols=19 Identities=26% Similarity=0.691 Sum_probs=17.8
Q ss_pred cCccEEEEECCCccCCChH
Q psy14856 377 KGVDFYFYVDSDSHLDNPD 395 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~ 395 (734)
..++|+.++|+|++++|++
T Consensus 174 P~AeWIWWlD~DAlimn~~ 192 (364)
T KOG4748|consen 174 PDAEWIWWLDQDALIMNPD 192 (364)
T ss_pred CCCcEEEEecccchhhCcc
Confidence 8999999999999999875
No 217
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=42.57 E-value=19 Score=45.07 Aligned_cols=72 Identities=17% Similarity=0.269 Sum_probs=53.5
Q ss_pred CCCCcHHHHHHHHHHhc------cCcceEEEEeCCCCCc-----HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHH
Q psy14856 330 NQEYHAPLFDDYIHNFK------TMFKNVKYIAHNSTVN-----SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVL 397 (734)
Q Consensus 330 s~D~t~~il~~f~~~~~------~~y~~V~ii~~~~~~g-----~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL 397 (734)
++..|..+||=+++..+ ..-+.+.+|..|++.+ +|.|.|.-+... .-.++.|++-+|+|-...||+++
T Consensus 428 ~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~ 507 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAV 507 (1044)
T ss_pred CCCCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhh
Confidence 34566666665554322 1456777787777765 688999888643 33799999999999999999999
Q ss_pred HHHH
Q psy14856 398 KYLV 401 (734)
Q Consensus 398 ~~LI 401 (734)
++-+
T Consensus 508 r~AM 511 (1044)
T PLN02915 508 REAM 511 (1044)
T ss_pred Hhhc
Confidence 9877
No 218
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=42.49 E-value=1.8e+02 Score=26.55 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=61.8
Q ss_pred CCcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEeccce
Q psy14856 31 EDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDV 110 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv 110 (734)
.....|+.+-...+++....++.....+.+++++-..+. . -+-..+...++.-. .+ .|++.|+-|+
T Consensus 25 ~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n----------~-g~~~~~n~~~~~a~--~~-~i~~ld~D~~ 90 (169)
T PF00535_consen 25 DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN----------L-GFSAARNRGIKHAK--GE-YILFLDDDDI 90 (169)
T ss_dssp GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC----------S-HHHHHHHHHHHH----SS-EEEEEETTEE
T ss_pred CCCEEEEEecccccccccccccccccccccccccccccc----------c-cccccccccccccc--ee-EEEEeCCCce
Confidence 356667777777788888888877766667777633322 1 12334444555432 23 9999999666
Q ss_pred eEeCCHHHHHHHHhcCCCcEEEccCCcccCC
Q psy14856 111 IIDGGVNDILERFNTFDANIVFGAERLCWPD 141 (734)
Q Consensus 111 ~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~ 141 (734)
+--.--+++++.+.+.+..++++.-....++
T Consensus 91 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 121 (169)
T PF00535_consen 91 ISPDWLEELVEALEKNPPDVVIGSVIYIDDD 121 (169)
T ss_dssp E-TTHHHHHHHHHHHCTTEEEEEEEEEEECT
T ss_pred EcHHHHHHHHHHHHhCCCcEEEEEEEEecCC
Confidence 6555579999999998887777664444433
No 219
>KOG3844|consensus
Probab=42.41 E-value=2.2e+02 Score=32.29 Aligned_cols=162 Identities=16% Similarity=0.189 Sum_probs=96.1
Q ss_pred CCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCccccc-ccCe-eeeccchHHHHHHHHHHhhchhhhh
Q psy14856 555 NQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVP-TRDI-HMKQVGLAGVWAEFLRKYVVPLQER 632 (734)
Q Consensus 555 ~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vp-t~di-~~~~~g~~~~~~~~l~~~v~P~~~~ 632 (734)
.+|.+.+..-+++++..-+....|++.+..|..-- + .| +.|. |-|+ .++ |++..-+--+++.+.-..+.
T Consensus 33 ngPf~h~~i~~~vnd~~l~~vrkei~~~~~f~~k~-t--Dl----yr~~QtgdL~nl~--~le~p~lf~~r~~Lyke~r~ 103 (476)
T KOG3844|consen 33 NGPFNHFIIRDFVNDSLLRVVRKEIHGSIHFTEKE-T--DL----YRVLQTGDLANLE--GLEFPALFSFRDSLYKEARG 103 (476)
T ss_pred cCCCcceeeeccCCHHHHHHHHHHHhhccchhhhc-c--hh----hheeccccccccc--cccchhHHHHHHHHHHHHHH
Confidence 46888888999999999999998988887775432 1 11 1222 2232 222 33321111233333322222
Q ss_pred hhcCCCCCCC--CCcceeEEEEcCCCCCCCCccccC---CceEEEEEecCCC--CcCCCccEEEeecccee--------e
Q psy14856 633 EFIGYHHEPV--RAPMSFVVRYRPDEQPSLRPHHDS---STYTINIALNQVG--VDYEGGGCRFIRYNCNV--------T 697 (734)
Q Consensus 633 ~f~~~~~~~l--~~~~~fvvrY~~~~~~~l~~H~D~---S~~T~ni~Ln~~~--~dfeGGg~~F~~~~~~v--------~ 697 (734)
-++.. ++++ ...+..+-+|..+. +|-.|-|- -.+++-.+|-+++ .+| ||+++-....|.- .
T Consensus 104 ~~q~v-tg~~s~sk~Dms~s~Y~kgd--~LL~HDD~ietRriaFilYL~~~Dwds~~-GG~L~Lf~~d~~~~P~s~~asl 179 (476)
T KOG3844|consen 104 EIQDV-TGGLSTSKIDMSGSYYRKGD--HLLCHDDVIETRRIAFILYLVDPDWDSEY-GGELRLFPDDCPSQPKSVAASL 179 (476)
T ss_pred HHHhc-cCccccceeeeceeeeeccc--eeccccccccceEEEEEEEecCccccccc-CceeEecccccccCccchhhcc
Confidence 22222 2221 24478999997665 69899884 4599999998874 235 9999986655532 2
Q ss_pred cccceeEEEe---CCCcccccCcccCCc-eeEEEEEeee
Q psy14856 698 ATRMGWMLMH---PGRLTHYHEGLQVTQ-GTRYIMISFV 732 (734)
Q Consensus 698 ~~~~G~al~h---~g~lth~H~g~~vT~-G~Ryilv~F~ 732 (734)
.|.--..++| |-+ +|..-.|.+ +.|..+-+|+
T Consensus 180 ~P~~Nql~fFeVsp~S---FH~V~Ev~sde~RlSIsGWf 215 (476)
T KOG3844|consen 180 EPQWNQLVFFEVSPIS---FHDVEEVLSDEPRLSISGWF 215 (476)
T ss_pred CcccceEEEEEecccc---hhhHHHHhccCcceeEeeee
Confidence 2444555555 443 688777654 4467777775
No 220
>PLN02436 cellulose synthase A
Probab=42.05 E-value=38 Score=42.72 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 363 SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 363 ~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
+|.|.|..+... .-.++.|++-+|+|-...||+++++-+
T Consensus 550 KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AM 589 (1094)
T PLN02436 550 KAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAM 589 (1094)
T ss_pred hhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhh
Confidence 588999888643 337999999999999999999999877
No 221
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=41.81 E-value=58 Score=32.36 Aligned_cols=110 Identities=16% Similarity=0.226 Sum_probs=69.7
Q ss_pred CCCccchHHHHHHHHhhcCCCCCeEEEEEeccceeEeCCH-HHHHHHHhcCCCcEEEccCCcccCCCcCccc--------
Q psy14856 77 SLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGV-NDILERFNTFDANIVFGAERLCWPDTSLYDK-------- 147 (734)
Q Consensus 77 ~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~-~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~-------- 147 (734)
..|-..|+..|...++. ....| +|+++|| |+.....- .+|+..+.+.+.-+| ++=..+.|...+...
T Consensus 12 ~~g~N~Kv~nL~~~~~~-~a~~d-~~~~~Ds-Di~v~p~~L~~lv~~l~~p~vglV-t~~~~~~~~~~~~~~l~~~~~~~ 87 (175)
T PF13506_consen 12 PRGCNPKVNNLAQGLEA-GAKYD-YLVISDS-DIRVPPDYLRELVAPLADPGVGLV-TGLPRGVPARGFWSRLEAAFFNF 87 (175)
T ss_pred CCCCChHHHHHHHHHHh-hCCCC-EEEEECC-CeeECHHHHHHHHHHHhCCCCcEE-EecccccCCcCHHHHHHHHHHhH
Confidence 44667999999999987 23345 9999999 88775443 888988988655554 333344444432100
Q ss_pred CCCC---CCCCcccccceeeeeHHHHHHH--HHhccCCCCCChhHHHHHh
Q psy14856 148 YPAV---GSGYRYLNSGGFIGYAKDIKEL--ISNRSIKNEEDDQLYYALL 192 (734)
Q Consensus 148 yP~~---~~g~R~LNSG~~iG~a~~l~~l--~~~~~~~d~~dDQl~~t~i 192 (734)
.|.+ ..+.+|.+.|.++=+...+.++ ++.+ .+.-.|=.++++.
T Consensus 88 ~~~~~~a~~~~~~~~G~~m~~rr~~L~~~GG~~~l--~~~ladD~~l~~~ 135 (175)
T PF13506_consen 88 LPGVLQALGGAPFAWGGSMAFRREALEEIGGFEAL--ADYLADDYALGRR 135 (175)
T ss_pred HHHHHHHhcCCCceecceeeeEHHHHHHcccHHHH--hhhhhHHHHHHHH
Confidence 0000 2467888888888888888776 4443 2334444555554
No 222
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=41.71 E-value=2.1e+02 Score=29.19 Aligned_cols=84 Identities=13% Similarity=0.241 Sum_probs=49.4
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe-C-CCCCcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA-H-NSTVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~-~-~~~~g~a~arN~al~~a~~~~~ 379 (734)
..|.|...++++.+...- ++ ++|..+ . +.+++++++.+ ++++. . ....+.+..+ .|++. ...
T Consensus 26 GkPli~~~i~~l~~~~~~-~~--ivv~t~--~--~~i~~~~~~~~-----~~v~~~~~~~~~g~~~~~-~a~~~---~~~ 89 (238)
T PRK13368 26 GKPMIQHVYERAAQAAGV-EE--VYVATD--D--QRIEDAVEAFG-----GKVVMTSDDHLSGTDRLA-EVMLK---IEA 89 (238)
T ss_pred CcCHHHHHHHHHHhcCCC-Ce--EEEECC--h--HHHHHHHHHcC-----CeEEecCccCCCccHHHH-HHHHh---CCC
Confidence 479999999999986322 23 334322 1 44556665432 33332 2 2222322222 23322 257
Q ss_pred cEEEEECCCc-cCCChHHHHHHHH
Q psy14856 380 DFYFYVDSDS-HLDNPDVLKYLVN 402 (734)
Q Consensus 380 DYlf~vDAD~-~L~np~tL~~LI~ 402 (734)
|.++++++|. .++ +++++.|++
T Consensus 90 d~~lv~~~D~P~i~-~~~i~~l~~ 112 (238)
T PRK13368 90 DIYINVQGDEPMIR-PRDIDTLIQ 112 (238)
T ss_pred CEEEEEcCCcCcCC-HHHHHHHHH
Confidence 8999999999 565 999999987
No 223
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=41.46 E-value=1.9e+02 Score=29.56 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=53.5
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe--CCCCCcHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA--HNSTVNSKEAR 367 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~--~~~~~g~a~ar 367 (734)
.|+-++ |+-+ .+.|...+++|.+..- .++.+.+.. ..+.+.+++.+.... ..+.++. ..+..|-+.+-
T Consensus 21 ~pK~ll--pv~g-~pli~~~l~~l~~~g~--~~v~iv~~~----~~~~~~~~l~~~~~~-~~~~i~~~~~~~~~G~~~al 90 (233)
T cd06425 21 VPKPLV--EFCN-KPMIEHQIEALAKAGV--KEIILAVNY----RPEDMVPFLKEYEKK-LGIKITFSIETEPLGTAGPL 90 (233)
T ss_pred CCCccC--eECC-cchHHHHHHHHHHCCC--cEEEEEeee----CHHHHHHHHhccccc-CCeEEEeccCCCCCccHHHH
Confidence 455444 3334 4999999999999754 334333322 223444455433211 2344433 33445656666
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
..|++.......+ ++++.+|++.+ .+ ++.+++
T Consensus 91 ~~a~~~~~~~~~~-~lv~~~D~~~~-~~-~~~~~~ 122 (233)
T cd06425 91 ALARDLLGDDDEP-FFVLNSDVICD-FP-LAELLD 122 (233)
T ss_pred HHHHHHhccCCCC-EEEEeCCEeeC-CC-HHHHHH
Confidence 6666554222345 56679998875 44 455554
No 224
>PLN00176 galactinol synthase
Probab=41.42 E-value=72 Score=35.43 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=51.6
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCc--Cc--------------ccCCCCCCC---Ccccccc
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTS--LY--------------DKYPAVGSG---YRYLNSG 161 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~--l~--------------~~yP~~~~g---~R~LNSG 161 (734)
=||+.|+ |+++..+.++|.+. ..+ .|+|=..|+++.. -. -.+|. ..| +.|.|||
T Consensus 115 kvlyLDa-D~lv~~nid~Lf~~--~~~---~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~-~~g~~~~~yFNSG 187 (333)
T PLN00176 115 KMIYLDG-DIQVFENIDHLFDL--PDG---YFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPA-ELGPPPPLYFNAG 187 (333)
T ss_pred eEEEecC-CEEeecChHHHhcC--CCc---ceEEEecccccccccccccccccccccchhhccchh-hccCCCCCeEEeE
Confidence 6889999 99999999999865 222 2444444543321 11 11222 112 4699999
Q ss_pred eeeeeHH-HH-HHHHHhcc--CCCCCChhHHHHHhhhch
Q psy14856 162 GFIGYAK-DI-KELISNRS--IKNEEDDQLYYALLFLDE 196 (734)
Q Consensus 162 ~~iG~a~-~l-~~l~~~~~--~~d~~dDQl~~t~i~l~~ 196 (734)
.++=.-. .. .+|++... ..-...||-++..+|-+.
T Consensus 188 Vlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~ 226 (333)
T PLN00176 188 MFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDI 226 (333)
T ss_pred EEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCc
Confidence 8764432 11 23333221 123457999999888764
No 225
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase
Probab=41.24 E-value=3.5e+02 Score=31.58 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=76.3
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHccc--CCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeC-----------
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLN--YPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAH----------- 357 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~Ld--YPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~----------- 357 (734)
|+-+| ++++...|++-..+.+++++ | ...|-++|=+| +.|.+.+.+|+++++..-..|.....
T Consensus 98 PKs~i--~v~~~~sfldl~~~qi~~l~~~~-g~~vPl~iMtS-~~T~~~T~~~l~k~~~~~~~i~~F~Q~~~P~l~~~~~ 173 (469)
T PLN02474 98 PKSVI--EVRNGLTFLDLIVIQIENLNKKY-GCNVPLLLMNS-FNTHDDTQKIVEKYTNSNIEIHTFNQSQYPRVVADDF 173 (469)
T ss_pred CceeE--EcCCCCcHHHHHHHHHHHHHHHc-CCCceEEEECC-CchhHHHHHHHHHcCCCccceEEEecCceeeEecCCC
Confidence 66666 35777889999999888765 5 34565666665 46666677788776532112222110
Q ss_pred -----CCCC--------c----HHHHHHHH-HHhhhhcCccEEEEECCCcc--CCChHHHHHHHHcCCceeeecccC
Q psy14856 358 -----NSTV--------N----SKEARNLA-VENSLHKGVDFYFYVDSDSH--LDNPDVLKYLVNRNESLIAPLLVR 414 (734)
Q Consensus 358 -----~~~~--------g----~a~arN~a-l~~a~~~~~DYlf~vDAD~~--L~np~tL~~LI~~nk~IVaP~l~~ 414 (734)
+... | ..+.++.| ++.-++..-+|+|+...|+. .-||..|.++++++...++.+..+
T Consensus 174 ~p~~~~~~~~~~~~~P~GhGd~y~aL~~sG~Ld~l~~~G~eyifv~nvDNLga~vDp~~lg~~~~~~~e~~~ev~~K 250 (469)
T PLN02474 174 VPWPSKGKTDKDGWYPPGHGDVFPSLMNSGKLDALLSQGKEYVFIANSDNLGAIVDLKILNHLIQNKNEYCMEVTPK 250 (469)
T ss_pred CcccccCCCCcceeeeCCCchHHHHHHhCChHHHHHhcCCEEEEEEecCccccccCHHHHHHHHhcCCceEEEEeec
Confidence 0000 1 13344443 44445577899999999973 225999999999998888887743
No 226
>PLN02190 cellulose synthase-like protein
Probab=41.10 E-value=48 Score=40.47 Aligned_cols=54 Identities=24% Similarity=0.335 Sum_probs=43.4
Q ss_pred CcceEEEEeCCCCCc-----HHHHHHHHHHhh-hhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 348 MFKNVKYIAHNSTVN-----SKEARNLAVENS-LHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 348 ~y~~V~ii~~~~~~g-----~a~arN~al~~a-~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
.-+.+.++..|++.+ +|.|.|..+... .-.++.|++-+|+|-..+||+++++-+
T Consensus 250 ~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~Am 309 (756)
T PLN02190 250 EVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAM 309 (756)
T ss_pred cCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhh
Confidence 356777787777765 688888887643 338999999999999999999999855
No 227
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=40.93 E-value=1.6e+02 Score=29.28 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=51.0
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
.++.|+.|....+++....+++... .+++.++...+. .|.|...+...++.. ..| +|+|.|+-|.+
T Consensus 32 ~~~eiivvdd~s~d~t~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~n~~~~~a--~~d-~i~~lD~D~~~ 97 (234)
T cd06421 32 DKLRVYVLDDGRRPELRALAAELGV-EYGYRYLTRPDN----------RHAKAGNLNNALAHT--TGD-FVAILDADHVP 97 (234)
T ss_pred ccEEEEEEcCCCchhHHHHHHHhhc-ccCceEEEeCCC----------CCCcHHHHHHHHHhC--CCC-EEEEEccccCc
Confidence 3477777777778887777765432 234555533222 233455566666643 234 99999994444
Q ss_pred EeCCHHHHHHHHhc-CCCcEEEc
Q psy14856 112 IDGGVNDILERFNT-FDANIVFG 133 (734)
Q Consensus 112 f~~~~~~ll~rf~~-~~~~ilfs 133 (734)
--.-.+.+++.+.+ .+..++.+
T Consensus 98 ~~~~l~~l~~~~~~~~~~~~v~~ 120 (234)
T cd06421 98 TPDFLRRTLGYFLDDPKVALVQT 120 (234)
T ss_pred CccHHHHHHHHHhcCCCeEEEec
Confidence 33334777777766 33344443
No 228
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=40.01 E-value=1.5e+02 Score=30.31 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=33.1
Q ss_pred hHHHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEcc
Q psy14856 83 KVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGA 134 (734)
Q Consensus 83 Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsa 134 (734)
|-..+...++..+ -| +|+|.|+-|.+--.-.+++++.|.+.+..|.+.+
T Consensus 72 ~~~a~n~g~~~a~--gd-~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~ 120 (241)
T cd06427 72 KPKACNYALAFAR--GE-YVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQ 120 (241)
T ss_pred hHHHHHHHHHhcC--CC-EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEe
Confidence 4456667777543 34 9999999776554555888888876556665543
No 229
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=39.40 E-value=2.7e+02 Score=32.71 Aligned_cols=93 Identities=15% Similarity=0.217 Sum_probs=56.6
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc--HHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN--SKEA 366 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g--~a~a 366 (734)
..++|.|.+=++- ...++++++.+.++..+ +.|+|-.+++...+.+++.+.+... ..+++|+.- +|+| .+..
T Consensus 263 ~~~kiav~lHv~Y-~DLl~E~l~~l~~~p~~---~Dl~ITt~~~~~~~~i~~~l~~~~~-~~~~~v~vv-~NrGRDi~pf 336 (498)
T PF05045_consen 263 SKKKIAVHLHVFY-PDLLEEILDYLANIPFP---YDLFITTDSEEKKEEIEEILAKRPG-FKNAEVRVV-ENRGRDILPF 336 (498)
T ss_pred CCCcEEEEEEEEc-HhhHHHHHHHHHhCCCC---eEEEEECCchhhHHHHHHHHHhccC-CCceEEEEe-CCCCccHHHH
Confidence 3578899988887 48899999999998765 6788876555556667766644432 223443322 3433 3332
Q ss_pred HHHHHHhhhhcCccEEEEECC
Q psy14856 367 RNLAVENSLHKGVDFYFYVDS 387 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDA 387 (734)
.-...+.-...++||+..+-+
T Consensus 337 Lv~~~~~l~~~~YD~v~~~Ht 357 (498)
T PF05045_consen 337 LVGLKDELLDSKYDYVCHLHT 357 (498)
T ss_pred HHHHHHHhccCCccEEEEEEc
Confidence 211112111257899988754
No 230
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=39.36 E-value=1.6e+02 Score=31.78 Aligned_cols=37 Identities=19% Similarity=0.439 Sum_probs=29.9
Q ss_pred CCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccC
Q psy14856 98 DDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWP 140 (734)
Q Consensus 98 ~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP 140 (734)
+..-||+.|+ ||+ ..|..||++|-+.+..||+ .+||-
T Consensus 142 ~~swVlWlDa-DIv--~~P~~lI~dli~~~kdIiv---Pn~~~ 178 (269)
T PF03452_consen 142 WHSWVLWLDA-DIV--ETPPTLIQDLIAHDKDIIV---PNCWR 178 (269)
T ss_pred cccEEEEEec-Ccc--cCChHHHHHHHhCCCCEEc---cceee
Confidence 4559999999 998 4455599999999999987 46763
No 231
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=39.30 E-value=3e+02 Score=28.16 Aligned_cols=101 Identities=14% Similarity=0.146 Sum_probs=57.0
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcc-eEEEEeCCCCCcHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFK-NVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~-~V~ii~~~~~~g~a~ar 367 (734)
..|+-++-+. ..|.|...|+++.+..-. ++. +..+. ...+.+.+++... ..+. .+.+...++..|-+.|-
T Consensus 20 ~~pK~llpv~---~~pli~~~l~~l~~~gi~--~i~--vv~~~-~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~G~~~al 90 (240)
T cd02538 20 VVSKQLLPVY---DKPMIYYPLSTLMLAGIR--EIL--IISTP-EDLPLFKELLGDG-SDLGIRITYAVQPKPGGLAQAF 90 (240)
T ss_pred CCCceeeEEC---CEEhHHHHHHHHHHCCCC--EEE--EEeCc-chHHHHHHHHhcc-cccCceEEEeeCCCCCCHHHHH
Confidence 3466665543 479999999999975432 332 32221 2234455555432 1121 34344434445666666
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
..|.+.. +.|-++++.+|..+. +..++.+++
T Consensus 91 ~~a~~~~---~~~~~lv~~gD~~~~-~~~~~~~~~ 121 (240)
T cd02538 91 IIGEEFI---GDDPVCLILGDNIFY-GQGLSPILQ 121 (240)
T ss_pred HHHHHhc---CCCCEEEEECCEEEc-cHHHHHHHH
Confidence 6666553 346677789998776 455677775
No 232
>PLN02248 cellulose synthase-like protein
Probab=38.99 E-value=35 Score=43.15 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=39.2
Q ss_pred cceEEEEeCCCCCc-----HHHHHHHHHH-hhhhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 349 FKNVKYIAHNSTVN-----SKEARNLAVE-NSLHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 349 y~~V~ii~~~~~~g-----~a~arN~al~-~a~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
.+.+.+|..+++.+ ||.|.|.-+. -|...+++|++.+|+|.+..||++|++-+
T Consensus 584 lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AM 642 (1135)
T PLN02248 584 LPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGM 642 (1135)
T ss_pred cceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcc
Confidence 44555555555544 5778876665 33448999999999999999999999876
No 233
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=38.72 E-value=2.1e+02 Score=33.24 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=61.6
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
..|+.++-+. +..+.|...++++.++. ++ .+. |..+. .+...+++.+++.+ .+..+++..++.++-+.|--
T Consensus 21 ~~PK~~l~l~--g~~~ll~~tl~~l~~~~-~~-~iv--iv~~~-~~~~~~~~~l~~~~--~~~~~~i~Ep~~~gTa~ai~ 91 (468)
T TIGR01479 21 LYPKQFLALV--GDLTMLQQTLKRLAGLP-CS-SPL--VICNE-EHRFIVAEQLREIG--KLASNIILEPVGRNTAPAIA 91 (468)
T ss_pred CCCCceeEcC--CCCcHHHHHHHHHhcCC-Cc-CcE--EecCH-HHHHHHHHHHHHcC--CCcceEEecccccCchHHHH
Confidence 3577776654 33699999999999885 33 232 33322 23344454444432 12234554455555554444
Q ss_pred HHHHhh-hh-cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 369 LAVENS-LH-KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 369 ~al~~a-~~-~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.|...+ +. ...++++++-+|..+.++.++..+++
T Consensus 92 ~aa~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l~ 127 (468)
T TIGR01479 92 LAALLAARRNGEDPLLLVLAADHVITDEDAFQAAVK 127 (468)
T ss_pred HHHHHHHHHHCCCcEEEEecCceeecCHHHHHHHHH
Confidence 444333 22 23568999999988876777877765
No 234
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=38.55 E-value=2.5e+02 Score=28.26 Aligned_cols=99 Identities=14% Similarity=0.225 Sum_probs=54.9
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+.++-+ +..+.|...++++.+.... +++ +|..+.+ ..+.+++.... ...+.++...+ +...+-..
T Consensus 17 ~~K~l~~l---~gkpll~~~l~~l~~~~~~-~~i--vVv~~~~-~~~~~~~~~~~----~~~~~~~~~~~--~~~~sl~~ 83 (217)
T TIGR00453 17 VPKQYLEL---GGRPLLEHTLDAFLAHPAI-DEV--VVVVSPE-DQEFFQKYLVA----RAVPKIVAGGD--TRQDSVRN 83 (217)
T ss_pred CCccEeEE---CCeEHHHHHHHHHhcCCCC-CEE--EEEEChH-HHHHHHHHhhc----CCcEEEeCCCc--hHHHHHHH
Confidence 35555543 3579999999999986432 334 3332222 12333333221 12344553322 11222233
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
|++.+ .+.|+++++++|.=+-++++++.|++.
T Consensus 84 ~l~~~--~~~d~vlv~~~D~P~i~~~~i~~li~~ 115 (217)
T TIGR00453 84 GLKAL--KDAEWVLVHDAARPFVPKELLDRLLEA 115 (217)
T ss_pred HHHhC--CCCCEEEEccCccCCCCHHHHHHHHHH
Confidence 44332 167999999999954459999999973
No 235
>KOG2754|consensus
Probab=38.39 E-value=1.3e+02 Score=33.90 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=67.1
Q ss_pred cchhhhhhhhhheeccccCCCCCCCCcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHH
Q psy14856 7 LNCLILSCVVFFISVHCNKVKNIDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNL 86 (734)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~ 86 (734)
+-|++++.+.+... ++ .+-+||..+...-++.--|+.|-+--|+.++..-... .++ .
T Consensus 8 ~~~llla~~~~v~~-~~--------~RtLVL~d~~~~~ethSvFl~sLkdRgf~L~~~~a~d-------------ssl-~ 64 (443)
T KOG2754|consen 8 IFCLLLALIGFVLS-QA--------ARTLVLLDNLAVKETHSVFLKSLKDRGFKLTYKLADD-------------SSL-A 64 (443)
T ss_pred HHHHHHHHHHHHhc-cc--------CcEEEEeeccccccchhhhhhhHHhcCceeEEEecCC-------------chh-H
Confidence 34776665544433 33 2789999999999999999999999999999762211 111 2
Q ss_pred HHHHHhhcCCCCCeEEEEEec-cceeEeCCHHHHHHHHhcCCCcEEEccCCc
Q psy14856 87 LKNELDEMDITDDMIILVTDS-YDVIIDGGVNDILERFNTFDANIVFGAERL 137 (734)
Q Consensus 87 l~~~L~~~~~~~D~lvl~vDs-yDv~f~~~~~~ll~rf~~~~~~ilfsae~~ 137 (734)
|-+|=+.+ -++ +|+|.=+ -+.==+.+++.|+ +|-+.+..|+++|...
T Consensus 65 L~~Ygq~L--yDn-lIifap~~e~fgg~is~k~l~-~Fvd~gGnvlv~ass~ 112 (443)
T KOG2754|consen 65 LFKYGQRL--YDN-LIIFAPSVENFGGSISVKSLA-KFVDSGGNVLVAASSA 112 (443)
T ss_pred HHHhhhHh--hcc-EEEecCchhhcCCCCCHHHHH-HHHhCCCcEEEEcCCc
Confidence 22233332 134 6666543 3333455666665 7889999999988763
No 236
>PLN03193 beta-1,3-galactosyltransferase; Provisional
Probab=37.55 E-value=2.7e+02 Score=31.81 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=71.6
Q ss_pred HHHhccCcceEEEEeCCCCCcHHHHHH-HHHHhhhh-cCccEEEEECCCccCCChHHHHHHHHcCC---ceee------e
Q psy14856 342 IHNFKTMFKNVKYIAHNSTVNSKEARN-LAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVNRNE---SLIA------P 410 (734)
Q Consensus 342 ~~~~~~~y~~V~ii~~~~~~g~a~arN-~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~~nk---~IVa------P 410 (734)
+++....|.++-+....+.-..-..|- +++..|.+ -+++|++-+|-|+++. .+.|-..++... .+-. |
T Consensus 198 Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVn-v~~L~~~L~~~~~~~rlYiG~m~~gP 276 (408)
T PLN03193 198 IEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVN-IATLGETLVRHRKKPRVYIGCMKSGP 276 (408)
T ss_pred HHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEc-HHHHHHHHHhcCCCCCEEEEecccCc
Confidence 333334456666655544433222222 23333433 4689999999999996 877766665321 1111 2
Q ss_pred cccCCCcccccccccccCCccccchHHHHHHHhcccCCcceeeeceee-eEEeeehhhHhhcccc--cccccCCCchhHH
Q psy14856 411 LLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIK--TIYTLNSMDYDMA 487 (734)
Q Consensus 411 ~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~--~~f~~~~~deDm~ 487 (734)
+...++ .+|.-.+.| .... .|-.=-||.+ ..|+|++++.+. ... .... ..--||..
T Consensus 277 vr~~~~-------------~ky~epe~w-~~~~-----~~~~YPpyAsG~gYVlS~DLa~~-I~~n~~~L~-~y~~EDV~ 335 (408)
T PLN03193 277 VLSQKG-------------VRYHEPEYW-KFGE-----NGNKYFRHATGQLYAISKDLASY-ISINQHVLH-KYANEDVS 335 (408)
T ss_pred cccCCC-------------CcCcCcccc-cccC-----ccccCCCCCCcceEEehHHHHHH-HHhChhhhc-ccCcchhh
Confidence 111111 111111111 1000 0111113333 478999999876 332 1111 12378999
Q ss_pred HHHHHHHcCeeEEEecccce
Q psy14856 488 FCTNLRNKGIHLKIDSTQEY 507 (734)
Q Consensus 488 Fc~~ar~~Gi~myv~N~~~~ 507 (734)
+...+-..++. |+++...+
T Consensus 336 vG~Wl~~L~V~-~vdd~~fc 354 (408)
T PLN03193 336 LGSWFIGLDVE-HIDDRRLC 354 (408)
T ss_pred hhhHhccCCce-eeeccccc
Confidence 88888777777 66665554
No 237
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=37.06 E-value=3.1e+02 Score=27.97 Aligned_cols=87 Identities=11% Similarity=0.215 Sum_probs=49.7
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC--CCCcHHHHHHHHHHhhhhcC
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN--STVNSKEARNLAVENSLHKG 378 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~--~~~g~a~arN~al~~a~~~~ 378 (734)
+..|.|+..++.+.+..-. ++ ++|..+ . +.+.+++.+. .++++... +..+.+.+.. +++.. ...
T Consensus 24 ~gkpll~~~l~~l~~~~~i-~~--ivvv~~---~-~~i~~~~~~~-----~~~~~~~~~~~~~gt~~~~~-~~~~~-~~~ 89 (239)
T cd02517 24 AGKPMIQHVYERAKKAKGL-DE--VVVATD---D-ERIADAVESF-----GGKVVMTSPDHPSGTDRIAE-VAEKL-DAD 89 (239)
T ss_pred CCcCHHHHHHHHHHhCCCC-CE--EEEECC---c-HHHHHHHHHc-----CCEEEEcCcccCchhHHHHH-HHHhc-CCC
Confidence 3479999999999976222 22 333322 1 4455555432 34444322 2233332222 22221 122
Q ss_pred ccEEEEECCCc-cCCChHHHHHHHH
Q psy14856 379 VDFYFYVDSDS-HLDNPDVLKYLVN 402 (734)
Q Consensus 379 ~DYlf~vDAD~-~L~np~tL~~LI~ 402 (734)
.|.++++++|. +++ +++|+.|++
T Consensus 90 ~d~vlv~~gD~Pli~-~~~l~~l~~ 113 (239)
T cd02517 90 DDIVVNVQGDEPLIP-PEMIDQVVA 113 (239)
T ss_pred CCEEEEecCCCCCCC-HHHHHHHHH
Confidence 48999999999 665 999999997
No 238
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=36.86 E-value=2e+02 Score=32.74 Aligned_cols=87 Identities=9% Similarity=0.186 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|+..++++.+.. -+++.+.+ . ...+.+++.+.. ..+.++...+..|-+.+-..|++.. ...|++
T Consensus 33 kpli~~~i~~l~~~g--i~~i~vv~-~---~~~~~i~~~~~~-----~~~~~i~~~~~~Gt~~al~~a~~~l--~~~~~v 99 (456)
T PRK09451 33 KPMVQHVIDAANELG--AQHVHLVY-G---HGGDLLKQTLAD-----EPLNWVLQAEQLGTGHAMQQAAPFF--ADDEDI 99 (456)
T ss_pred hhHHHHHHHHHHhcC--CCcEEEEE-C---CCHHHHHHhhcc-----CCcEEEECCCCCCcHHHHHHHHHhh--ccCCcE
Confidence 689999999998764 23454433 2 223445554432 1455665555556666655566543 235899
Q ss_pred EEECCCc-cCCChHHHHHHHHc
Q psy14856 383 FYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~vDAD~-~L~np~tL~~LI~~ 403 (734)
+++++|. +++ +..++.|++.
T Consensus 100 lV~~gD~P~i~-~~~i~~l~~~ 120 (456)
T PRK09451 100 LMLYGDVPLIS-VETLQRLRDA 120 (456)
T ss_pred EEEeCCcccCC-HHHHHHHHHH
Confidence 9999998 555 8999999974
No 239
>KOG1476|consensus
Probab=36.68 E-value=4.2e+02 Score=29.32 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=51.7
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc--HHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN--SKEA 366 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g--~a~a 366 (734)
.|+|.++.|.|... +=..-|.+|.+ |.-=. .++-++...-+.....+..++++.+-.|..+-.-.+..... ...=
T Consensus 86 ~~~iivVTPTY~R~-~q~~~LtRlanTL~~V~-nLhWIVVEd~~~~~p~v~~~L~rtgl~ythl~~~t~~~~~~~rg~~q 163 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRP-VQAAELTRLANTLRLVP-NLHWIVVEDGEGTTPEVSGILRRTGLPYTHLVHKTPMGYKARRGWEQ 163 (330)
T ss_pred CccEEEEcccccch-hHHHHHHHHHHHHhhcC-CeeEEEEecCCCCCHHHHHHHHHcCCceEEEeccCCCCCccccchhH
Confidence 78999999999875 32223333332 22222 36544444333677888899999888776655444333322 2567
Q ss_pred HHHHHHhhh
Q psy14856 367 RNLAVENSL 375 (734)
Q Consensus 367 rN~al~~a~ 375 (734)
||+|++.-+
T Consensus 164 Rn~aL~~ir 172 (330)
T KOG1476|consen 164 RNMALRWIR 172 (330)
T ss_pred HHHHHHHHH
Confidence 999998765
No 240
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=36.49 E-value=1.7e+02 Score=29.32 Aligned_cols=88 Identities=16% Similarity=0.284 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.+.|...++++.+..-. ++. |..+ +..+.+++++.+....-..+.++..+...|.+.+. ..+++...|.+
T Consensus 29 ~pli~~~l~~l~~~~~~--~ii--vv~~--~~~~~i~~~~~~~~~~~~~i~~~~~~~~~g~~~~l----~~~~~~~~~~~ 98 (220)
T cd06426 29 KPILETIIDRFIAQGFR--NFY--ISVN--YLAEMIEDYFGDGSKFGVNISYVREDKPLGTAGAL----SLLPEKPTDPF 98 (220)
T ss_pred cchHHHHHHHHHHCCCc--EEE--EECc--cCHHHHHHHHCCccccCccEEEEECCCCCcchHHH----HHHHhhCCCCE
Confidence 48999999999987544 343 3222 23455666654321111134555443444544433 23333336889
Q ss_pred EEECCCccCCChHHHHHHHH
Q psy14856 383 FYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~ 402 (734)
+++.+|.+.. . .++.|++
T Consensus 99 lv~~~D~i~~-~-~~~~l~~ 116 (220)
T cd06426 99 LVMNGDILTN-L-NYEHLLD 116 (220)
T ss_pred EEEcCCEeec-c-CHHHHHH
Confidence 9999997553 4 5666775
No 241
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.
Probab=36.01 E-value=1.4e+02 Score=29.97 Aligned_cols=110 Identities=8% Similarity=0.119 Sum_probs=60.8
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC----CCCcHHHHHHHHHHhhhh
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN----STVNSKEARNLAVENSLH 376 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~----~~~g~a~arN~al~~a~~ 376 (734)
+..|.|...++.+.+..... + ++|.. + + +.+.+.+++.+. .+.++.+. ...+...+-..|++.+.+
T Consensus 24 ~Gkpll~~~l~~l~~~~~~~-~--IvV~~--~-~-~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~ 93 (223)
T cd02513 24 GGKPLIAWTIEAALESKLFD-R--VVVST--D-D-EEIAEVARKYGA---EVPFLRPAELATDTASSIDVILHALDQLEE 93 (223)
T ss_pred CCccHHHHHHHHHHhCCCCC-E--EEEEC--C-c-HHHHHHHHHhCC---CceeeCChHHCCCCCCcHHHHHHHHHHHHH
Confidence 34689999999998765332 2 33432 2 2 233344444331 12223222 112334444455554322
Q ss_pred --cCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccCCCcccc
Q psy14856 377 --KGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVRPFKAWS 420 (734)
Q Consensus 377 --~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~~~~~ws 420 (734)
...|+++++++|.=+-.+++++.+++. +...+.|+.......|.
T Consensus 94 ~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 143 (223)
T cd02513 94 LGRDFDIVVLLQPTSPLRSAEDIDEAIELLLSEGADSVFSVTEFHRFPWR 143 (223)
T ss_pred hCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHhCCCCEEEEEEecCcCcHH
Confidence 136999999999966679999999973 34566665533333333
No 242
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=35.96 E-value=2.2e+02 Score=30.03 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=57.7
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCC--C-CC-c---HHHHHHHHH
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHN--S-TV-N---SKEARNLAV 371 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~--~-~~-g---~a~arN~al 371 (734)
+-++.+.-.+.||..=+ +..++++|-. -++...+.++++.++.+....-+++-.+. . .. . .+..+-..+
T Consensus 11 ~y~~~~~v~l~Sll~nn--~~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~~~~~~~~~~~~y~rL~~ 88 (248)
T cd06432 11 LYERFLRIMMLSVMKNT--KSPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLHKQTEKQRIIWGYKILFL 88 (248)
T ss_pred HHHHHHHHHHHHHHHcC--CCCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhhcccccchhHHHHHHHHH
Confidence 44677888888887654 2346655554 34455677778877766544333331011 0 00 1 111222333
Q ss_pred HhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 372 ENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 372 ~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
+.-+....|=++++|+|++.. +-|+.|...
T Consensus 89 ~~lLP~~vdkvLYLD~Dilv~--~dL~eL~~~ 118 (248)
T cd06432 89 DVLFPLNVDKVIFVDADQIVR--TDLKELMDM 118 (248)
T ss_pred HHhhhhccCEEEEEcCCceec--ccHHHHHhc
Confidence 423334689999999999885 778888875
No 243
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=35.93 E-value=2.3e+02 Score=27.10 Aligned_cols=86 Identities=20% Similarity=0.321 Sum_probs=51.0
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
..+.|+.+....+++..-.+++...-.-.+.++...+. .| +-+.+...++... .| .|+++|+ |.+
T Consensus 28 ~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n--------~G---~~~a~n~g~~~a~--~d-~i~~~D~-D~~ 92 (181)
T cd04187 28 YDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN--------FG---QQAALLAGLDHAR--GD-AVITMDA-DLQ 92 (181)
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC--------CC---cHHHHHHHHHhcC--CC-EEEEEeC-CCC
Confidence 46788888888888876666665433224555533221 12 3455666666543 24 9999999 544
Q ss_pred EeCC-HHHHHHHHhcCCCcEEEc
Q psy14856 112 IDGG-VNDILERFNTFDANIVFG 133 (734)
Q Consensus 112 f~~~-~~~ll~rf~~~~~~ilfs 133 (734)
+... .+.++++ .+.+..++++
T Consensus 93 ~~~~~l~~l~~~-~~~~~~~v~g 114 (181)
T cd04187 93 DPPELIPEMLAK-WEEGYDVVYG 114 (181)
T ss_pred CCHHHHHHHHHH-HhCCCcEEEE
Confidence 4222 3677776 3345566654
No 244
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=35.83 E-value=2.8e+02 Score=31.35 Aligned_cols=106 Identities=12% Similarity=0.225 Sum_probs=60.6
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+.++-+ +..|.|...++++.+...- +++.+.+ +. ...+..+.+... +..++++.... .|..
T Consensus 23 ~pKqll~l---~GkPll~~tl~~l~~~~~i-~~IvVVv-~~--~~~~~~~~~~~~----~~~v~~v~gG~------~r~~ 85 (378)
T PRK09382 23 VKKQWLRI---GGKPLWLHVLENLSSAPAF-KEIVVVI-HP--DDIAYMKKALPE----IKFVTLVTGGA------TRQE 85 (378)
T ss_pred CCeeEEEE---CCeeHHHHHHHHHhcCCCC-CeEEEEe-Ch--HHHHHHHHhccc----CCeEEEeCCCc------hHHH
Confidence 35666544 3579999999999976421 3443322 21 223344433321 22355553321 2445
Q ss_pred HHHhhhh-cCccEEEEECCCccCCChHHHHHHHHc--CCceeeecc
Q psy14856 370 AVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVNR--NESLIAPLL 412 (734)
Q Consensus 370 al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~~--nk~IVaP~l 412 (734)
++..|++ ...|++++.|+|.=+-++++++.|++. +...+.|.+
T Consensus 86 SV~~gL~~l~~d~VLVhdadrPfv~~e~I~~li~~~~~~~a~i~~~ 131 (378)
T PRK09382 86 SVRNALEALDSEYVLIHDAARPFVPKELIDRLIEALDKADCVLPAL 131 (378)
T ss_pred HHHHHHHhcCCCeEEEeeccccCCCHHHHHHHHHHhhcCCeEEEEE
Confidence 5555544 345999999999755569999999974 223444444
No 245
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=35.29 E-value=4.8e+02 Score=28.96 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=66.5
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
+.+|+=++-++- ....|..++.++..+.=+. + +++.+|+++-....+++.+--.....+ -+++ +..+.-|.|-
T Consensus 21 ~~~PKQFl~L~~--~~Sllq~T~~R~~~l~~~~-~--~~vVtne~~~f~v~eql~e~~~~~~~~-illE-P~gRnTApAI 93 (333)
T COG0836 21 KDYPKQFLKLFG--DLSLLQQTVKRLAFLGDIE-E--PLVVTNEKYRFIVKEQLPEIDIENAAG-IILE-PEGRNTAPAI 93 (333)
T ss_pred ccCCccceeeCC--CCcHHHHHHHHHhhcCCcc-C--eEEEeCHHHHHHHHHHHhhhhhccccc-eEec-cCCCCcHHHH
Confidence 467888888777 3588999999999854332 2 567777655544444444311122234 3343 3344445555
Q ss_pred HHHHHhhhhcCcc-EEEEECCCccCCChHHHHHHHH
Q psy14856 368 NLAVENSLHKGVD-FYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 368 N~al~~a~~~~~D-Ylf~vDAD~~L~np~tL~~LI~ 402 (734)
-.|.-.+.+..+| -++++=||-++.+.+....-++
T Consensus 94 A~aa~~~~~~~~d~~~lVlpsDH~I~d~~af~~av~ 129 (333)
T COG0836 94 ALAALSATAEGGDALVLVLPSDHVIADEEAFLNAVK 129 (333)
T ss_pred HHHHHHHHHhCCCcEEEEecCcceeccHHHHHHHHH
Confidence 5555555443334 7899999999998877666664
No 246
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=33.84 E-value=1.9e+02 Score=28.62 Aligned_cols=77 Identities=9% Similarity=0.210 Sum_probs=46.1
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
....+++++++...+-.++ +|+.- .+.+.+++..+.....|+.++++......-........++.-.+.+.|
T Consensus 32 ~g~dl~~~l~~~~~~~~~~-----ifllG---~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pd 103 (172)
T PF03808_consen 32 TGSDLFPDLLRRAEQRGKR-----IFLLG---GSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPD 103 (172)
T ss_pred CHHHHHHHHHHHHHHcCCe-----EEEEe---CCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCC
Confidence 3478889999988776552 44444 334566666666677799999997544321112222233333336778
Q ss_pred EEEEE
Q psy14856 381 FYFYV 385 (734)
Q Consensus 381 Ylf~v 385 (734)
++|+-
T Consensus 104 iv~vg 108 (172)
T PF03808_consen 104 IVFVG 108 (172)
T ss_pred EEEEE
Confidence 88764
No 247
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=33.79 E-value=2.7e+02 Score=30.02 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=58.3
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCc-ceEEEEeCCCCCcHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMF-KNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y-~~V~ii~~~~~~g~a~arN 368 (734)
.|+-+ +|+.+. |.|...|++|.+..-. +| +|.. ..+..+.+++++.. +..+ -++.++..++..|-+.|--
T Consensus 20 ~pK~L--lpv~gk-PmI~~~L~~l~~aGi~--~I--~iv~-~~~~~~~~~~~lg~-g~~~g~~i~~~~q~~~~Gta~al~ 90 (286)
T TIGR01207 20 VSKQL--LPIYDK-PMIYYPLSTLMLAGIR--DI--LIIS-TPQDTPRFQQLLGD-GSQWGVNLSYAVQPSPDGLAQAFI 90 (286)
T ss_pred CCcee--eEECCE-EhHHHHHHHHHHCCCC--EE--EEEe-cCCcHHHHHHHhcc-ccccCceEEEEEccCCCCHHHHHH
Confidence 45554 455665 9999999999986532 33 2222 12334455665543 2222 1455555556778777777
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.|.+.. ...++++ +-+|.++. +..++.|++
T Consensus 91 ~a~~~l--~~~~~~l-i~gD~i~~-~~~l~~ll~ 120 (286)
T TIGR01207 91 IGEDFI--GGDPSAL-VLGDNIFY-GHDLSDLLK 120 (286)
T ss_pred HHHHHh--CCCCEEE-EECCEecc-ccCHHHHHH
Confidence 776653 1234554 45888776 456666665
No 248
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=33.50 E-value=3e+02 Score=29.75 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=60.5
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+-+ +|+.+. |.|...|++|.+..- .+| +|..+ .+..+.+++++......--++.++..++..|-+.|--.
T Consensus 24 ~pK~L--lpv~gk-PmI~~~l~~l~~aGi--~~I--~ii~~-~~~~~~~~~~l~~g~~~g~~i~y~~q~~~~Gta~Al~~ 95 (292)
T PRK15480 24 VSKQL--LPIYDK-PMIYYPLSTLMLAGI--RDI--LIIST-PQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFII 95 (292)
T ss_pred CCceE--eEECCE-EHHHHHHHHHHHCCC--CEE--EEEec-CCchHHHHHHHcCccccCceeEEEECCCCCCHHHHHHH
Confidence 45553 556776 999999999998643 233 33322 22234556666432211124566766777788888777
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|.+.. .+.++++ +-+|.++. ...++.|++
T Consensus 96 a~~~i--~~~~~~l-v~gD~i~~-~~~l~~ll~ 124 (292)
T PRK15480 96 GEEFI--GGDDCAL-VLGDNIFY-GHDLPKLME 124 (292)
T ss_pred HHHHh--CCCCEEE-EECCeeee-ccCHHHHHH
Confidence 77664 2345555 55888776 345677775
No 249
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=33.20 E-value=2.7e+02 Score=28.15 Aligned_cols=94 Identities=15% Similarity=0.269 Sum_probs=51.5
Q ss_pred EecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEE-eCCCCCcHHHHHHHHHHhhhh
Q psy14856 298 FIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYI-AHNSTVNSKEARNLAVENSLH 376 (734)
Q Consensus 298 ~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii-~~~~~~g~a~arN~al~~a~~ 376 (734)
++.+ .|.|+..|+++.+.. -.++ +++........+.+.+.+.... .+++++ .+++..|-+.+--.|++..
T Consensus 25 ~i~g-~pli~~~l~~l~~~g--~~~i-vvv~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~g~~~~l~~a~~~l-- 95 (231)
T cd04183 25 EVDG-KPMIEWVIESLAKIF--DSRF-IFICRDEHNTKFHLDESLKLLA---PNATVVELDGETLGAACTVLLAADLI-- 95 (231)
T ss_pred EECC-EEHHHHHHHhhhccC--CceE-EEEEChHHhhhhhHHHHHHHhC---CCCEEEEeCCCCCcHHHHHHHHHhhc--
Confidence 3444 499999999999865 2334 3343322222233443333222 234333 2334556665555555442
Q ss_pred cCccEEEEECCCccCCChHHHHHHH
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
...++++++.+|.++. .+..+.+.
T Consensus 96 ~~~~~~lv~~~D~i~~-~~~~~~~~ 119 (231)
T cd04183 96 DNDDPLLIFNCDQIVE-SDLLAFLA 119 (231)
T ss_pred CCCCCEEEEecceeec-cCHHHHHH
Confidence 1347888999999885 66554443
No 250
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=33.00 E-value=3.3e+02 Score=27.39 Aligned_cols=86 Identities=8% Similarity=0.154 Sum_probs=54.9
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-CCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-TVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|+..++.+...- +++ +|..+ ..+..+.... ..+.++.... ..|...+--.|++.+ ..
T Consensus 31 ~g~~ll~~~i~~l~~~~---~~i--vvv~~---~~~~~~~~~~------~~~~~i~~~~~~~G~~~si~~~l~~~---~~ 93 (200)
T PRK02726 31 QGVPLLQRVARIAAACA---DEV--YIITP---WPERYQSLLP------PGCHWLREPPPSQGPLVAFAQGLPQI---KT 93 (200)
T ss_pred CCEeHHHHHHHHHHhhC---CEE--EEECC---CHHHHHhhcc------CCCeEecCCCCCCChHHHHHHHHHhC---CC
Confidence 45799999999997541 333 33332 1222322211 1456665432 356666666677654 46
Q ss_pred cEEEEECCCccCCChHHHHHHHHc
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
|++|++++|.=+-.+++++.|++.
T Consensus 94 ~~vlv~~~D~P~i~~~~i~~l~~~ 117 (200)
T PRK02726 94 EWVLLLACDLPRLTVDVLQEWLQQ 117 (200)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHH
Confidence 999999999977679999999974
No 251
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=32.84 E-value=97 Score=32.02 Aligned_cols=86 Identities=17% Similarity=0.155 Sum_probs=49.6
Q ss_pred EEEeecCCC-chHHHHHHHHHHcCCcc-----------eeeccCcccCCCCCCCCCccchHHHHHHHHhh-cCCCCCeEE
Q psy14856 36 VITVASNET-DGYKRFIQSAEVNKLQV-----------KTLGLHQPWLGGDMSSLGGGYKVNLLKNELDE-MDITDDMII 102 (734)
Q Consensus 36 vltvat~~~-~~~~r~~~Sa~~~~y~~-----------~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~-~~~~~D~lv 102 (734)
|+.+|=+|. ..+.+.++|.....||. .|+=... |......|++.-..+..+++.+ .....-++|
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~D---gs~d~~~gk~~~~~~~~~~~~~~~~~a~~e~i 77 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFD---GAIKKNRGKRDSQLWFFNYFCRVLFPDDPEFI 77 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeC---CcccccCcchHHHHHHHHHHHHHhhcCCCCEE
Confidence 577788886 79999999999999982 3331111 1101223333222222233322 111223499
Q ss_pred EEEeccceeEeCC-HHHHHHHHhc
Q psy14856 103 LVTDSYDVIIDGG-VNDILERFNT 125 (734)
Q Consensus 103 l~vDsyDv~f~~~-~~~ll~rf~~ 125 (734)
+++|+ |+++... .+++++.|.+
T Consensus 78 ~~~Da-D~~~~~~~l~~l~~~~~~ 100 (244)
T cd04190 78 LLVDA-DTKFDPDSIVQLYKAMDK 100 (244)
T ss_pred EEECC-CCcCCHhHHHHHHHHHHh
Confidence 99999 5555444 4778888854
No 252
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=32.64 E-value=4.1e+02 Score=28.76 Aligned_cols=136 Identities=22% Similarity=0.210 Sum_probs=69.2
Q ss_pred CCcEEEEEeecCCCc---hHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEec
Q psy14856 31 EDKFLVITVASNETD---GYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDS 107 (734)
Q Consensus 31 ~~~l~vltvat~~~~---~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDs 107 (734)
+.+++|+.+.+-... .+.|..++....++.++.+..... .++ .........|-.+-++. +-| =||+.||
T Consensus 29 ~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~-~~~-----~~~~~~~~tKl~~~~l~-~y~-kvlyLDa 100 (278)
T cd06914 29 KAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIA-SGG-----DAYWAKSLTKLRAFNQT-EYD-RIIYFDS 100 (278)
T ss_pred CCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccC-CCC-----CccHHHHHHHHHhcccc-cee-eEEEecC
Confidence 345555555443332 233444444556776665543221 110 01112223333333343 234 6899999
Q ss_pred cceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccceeeee-HHHH-HHHHHhc----cCCC
Q psy14856 108 YDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGY-AKDI-KELISNR----SIKN 181 (734)
Q Consensus 108 yDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG~~iG~-a~~l-~~l~~~~----~~~d 181 (734)
|+++..+.++|.+. ....-++|....| |.|||-++=. -... .+|.+.. ....
T Consensus 101 -D~l~~~~ideLf~~----~~~~~~Aap~~~~-----------------~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~ 158 (278)
T cd06914 101 -DSIIRHPMDELFFL----PNYIKFAAPRAYW-----------------KFASHLMVIKPSKEAFKELMTEILPAYLNKK 158 (278)
T ss_pred -ChhhhcChHHHhcC----CcccceeeecCcc-----------------eecceeEEEeCCHHHHHHHHHHHHHhcccCC
Confidence 99999999999842 1111233322112 8999966533 2222 2233321 1123
Q ss_pred CCChhHHHHHhhhch
Q psy14856 182 EEDDQLYYALLFLDE 196 (734)
Q Consensus 182 ~~dDQl~~t~i~l~~ 196 (734)
..-||-++..+|-+.
T Consensus 159 ~~~DQdiLN~~~~~~ 173 (278)
T cd06914 159 NEYDMDLINEEFYNS 173 (278)
T ss_pred CCCChHHHHHHHhCC
Confidence 567999999998775
No 253
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=32.58 E-value=87 Score=33.08 Aligned_cols=105 Identities=21% Similarity=0.349 Sum_probs=64.5
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC-CcH-HHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST-VNS-KEAR 367 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~-~g~-a~ar 367 (734)
.|+.+|-+- ..+.|.+.+++|.+.-=- + ++|+.| -+-.+.+++++.+++. .++++.++.- .+. ....
T Consensus 21 ~PK~Lvev~---gr~ii~~~i~~L~~~gi~--e--~vvV~~-g~~~~lve~~l~~~~~---~~~iv~N~~y~ktN~~~Sl 89 (239)
T COG1213 21 IPKALVEVG---GREIIYRTIENLAKAGIT--E--FVVVTN-GYRADLVEEFLKKYPF---NAKIVINSDYEKTNTGYSL 89 (239)
T ss_pred CCchhhhcC---CeEeHHHHHHHHHHcCCc--e--EEEEec-cchHHHHHHHHhcCCc---ceEEEeCCCcccCCceeEE
Confidence 466666555 248899999999875422 2 333332 3556788888876642 5666654421 111 1111
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc-CCceeee
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR-NESLIAP 410 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~-nk~IVaP 410 (734)
=.|.+.+ +.+ +..++||.+.+ |..++.|++. ++..|+.
T Consensus 90 ~~akd~~---~~~-fii~~sD~vye-~~~~e~l~~a~~~~li~d 128 (239)
T COG1213 90 LLAKDYM---DGR-FILVMSDHVYE-PSILERLLEAPGEGLIVD 128 (239)
T ss_pred eeehhhh---cCc-EEEEeCCEeec-HHHHHHHHhCcCCcEEEe
Confidence 1244444 334 77899999998 9999999996 5555543
No 254
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=32.50 E-value=2.2e+02 Score=28.47 Aligned_cols=86 Identities=19% Similarity=0.208 Sum_probs=48.8
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
.++.|+.+....+++....+++.......+.++-. + ++| +-..+...++... .| +|+|.|+-|++
T Consensus 30 ~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~-~----------~~~-~~~a~N~g~~~a~--~d-~v~~lD~D~~~ 94 (249)
T cd02525 30 DLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDN-P----------KRI-QSAGLNIGIRNSR--GD-IIIRVDAHAVY 94 (249)
T ss_pred CccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeC-C----------CCC-chHHHHHHHHHhC--CC-EEEEECCCccC
Confidence 45667777777777777777665544333555411 1 111 2234555555432 34 99999997765
Q ss_pred EeCCHHHHHHHHhcCCCcEEE
Q psy14856 112 IDGGVNDILERFNTFDANIVF 132 (734)
Q Consensus 112 f~~~~~~ll~rf~~~~~~ilf 132 (734)
.-.-.+.+++.+.+.+..++.
T Consensus 95 ~~~~l~~~~~~~~~~~~~~v~ 115 (249)
T cd02525 95 PKDYILELVEALKRTGADNVG 115 (249)
T ss_pred CHHHHHHHHHHHhcCCCCEEe
Confidence 333347777766665554443
No 255
>KOG2288|consensus
Probab=32.46 E-value=2e+02 Score=30.89 Aligned_cols=90 Identities=19% Similarity=0.195 Sum_probs=52.2
Q ss_pred HHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe-CCCCCcHHHHHHHHH-Hhhhh-cCccEEEEECCC
Q psy14856 312 KIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA-HNSTVNSKEARNLAV-ENSLH-KGVDFYFYVDSD 388 (734)
Q Consensus 312 sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~-~~~~~g~a~arN~al-~~a~~-~~~DYlf~vDAD 388 (734)
.|.+|.=|+.-+.-|+...........++.-++. ..+..+-++. +++.-.+..++-++. ..|.+ -++||++=+|-|
T Consensus 40 ~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~-~~~~DfllLd~h~E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDD 118 (274)
T KOG2288|consen 40 GLKRLEEEKGVIIRFVIGTATLGASLDRALEEEN-AQHGDFLLLDRHEEAYEELSAKTKAFFSAAVAHWDAEFYVKVDDD 118 (274)
T ss_pred chhhhccccceEEEEEeccCCccHHHHHHHHHHH-HhcCCeEeechhHHHHHHHHHHHHHHHHHHHHhccceEEEEcccc
Confidence 3445555666565555542223333333333332 3344555554 444444444555444 33333 688999999999
Q ss_pred ccCCChHHHHHHHHc
Q psy14856 389 SHLDNPDVLKYLVNR 403 (734)
Q Consensus 389 ~~L~np~tL~~LI~~ 403 (734)
+++. ++.|..+++.
T Consensus 119 v~v~-l~~L~~~la~ 132 (274)
T KOG2288|consen 119 VYVR-LARLGTLLAR 132 (274)
T ss_pred ceec-HHHHHHHHHh
Confidence 9996 9999988874
No 256
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=32.39 E-value=3.3e+02 Score=30.06 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=60.6
Q ss_pred CcEEEEEEecC-ChhHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCC---------
Q psy14856 291 PSVLISVFIDK-PTAFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHN--------- 358 (734)
Q Consensus 291 P~V~I~I~i~n-~~~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~--------- 358 (734)
..+-|+..+-+ =.+-+.-.+.||..=+ |...++++|-+ -++...+.+++..++.+. .|+++.-+
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~---~i~~~~id~~~~~~~~~ 99 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISDADKQRFSALAKQYNT---RINIYLINCERLKSLPS 99 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCHHHHHHHHHHHHhcCC---eEEEEEeCHHHHhCCcc
Confidence 56777777743 3666677777776433 44446655554 233444556666555432 34443321
Q ss_pred -CCCcHHH-HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcC
Q psy14856 359 -STVNSKE-ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 359 -~~~g~a~-arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~n 404 (734)
...+.+. +|=.+-+. +....|-++++|+|+++. +-|..|...+
T Consensus 100 ~~~~s~atY~Rl~ip~l-lp~~~dkvLYLD~Diiv~--~dl~~L~~~d 144 (334)
T PRK15171 100 TKNWTYATYFRFIIADY-FIDKTDKVLYLDADIACK--GSIKELIDLD 144 (334)
T ss_pred cCcCCHHHHHHHHHHHh-hhhhcCEEEEeeCCEEec--CCHHHHHhcc
Confidence 1122222 33322222 223689999999999995 5788888763
No 257
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=32.36 E-value=2.8e+02 Score=27.30 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=51.7
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
..+.|+.|....+|+-...+++...-.-.+.++-..+ + .| +-..+...++.-. .| +|+|.|+-+..
T Consensus 26 ~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~--n------~G---~~~a~n~g~~~a~--gd-~i~~lD~D~~~ 91 (224)
T cd06442 26 IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPG--K------RG---LGSAYIEGFKAAR--GD-VIVVMDADLSH 91 (224)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCC--C------CC---hHHHHHHHHHHcC--CC-EEEEEECCCCC
Confidence 5678888888888887777665433222334442111 1 12 3345666666543 24 99999995543
Q ss_pred EeCCHHHHHHHHhcCCCcEEEcc
Q psy14856 112 IDGGVNDILERFNTFDANIVFGA 134 (734)
Q Consensus 112 f~~~~~~ll~rf~~~~~~ilfsa 134 (734)
.-.-.+.+++.+.+.+..++.+.
T Consensus 92 ~~~~l~~l~~~~~~~~~~~v~g~ 114 (224)
T cd06442 92 PPEYIPELLEAQLEGGADLVIGS 114 (224)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEe
Confidence 21123677777666667776653
No 258
>KOG3710|consensus
Probab=32.30 E-value=2e+02 Score=30.43 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=56.9
Q ss_pred CcceeEEEEcCCCCCCCCcccc-----CCceEEEEEecCC-CCcCCCccEEE-eeccc--eeecccceeEEEeCCCcccc
Q psy14856 644 APMSFVVRYRPDEQPSLRPHHD-----SSTYTINIALNQV-GVDYEGGGCRF-IRYNC--NVTATRMGWMLMHPGRLTHY 714 (734)
Q Consensus 644 ~~~~fvvrY~~~~~~~l~~H~D-----~S~~T~ni~Ln~~-~~dfeGGg~~F-~~~~~--~v~~~~~G~al~h~g~lth~ 714 (734)
...+.|.+|- +...+--.|.| .--+|---+||+- +..-.||.++- ++-.. .-..|+-+..|.|=..-..=
T Consensus 142 RtkAMVAcYP-GNGtgYVrHVDNP~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~~~adieP~fdrLlffwSdrrnP 220 (280)
T KOG3710|consen 142 RTKAMVACYP-GNGTGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGILRIFPEGSTTFADIEPKFDRLLFFWSDRRNP 220 (280)
T ss_pred ceeEEEEEec-CCCceeeEeccCCCCCceEEEEEEEcccCcceeeccceeEeccCCCCcccccCcCCCeEEEEEecCCCc
Confidence 3467889995 44444555666 4458988889862 11245888874 33322 23458899999884332346
Q ss_pred cCcccCCceeEEEEEeeeC
Q psy14856 715 HEGLQVTQGTRYIMISFVD 733 (734)
Q Consensus 715 H~g~~vT~G~Ryilv~F~~ 733 (734)
||.+|..+++=.|.|.++|
T Consensus 221 hev~Pa~~tryaitvwyfd 239 (280)
T KOG3710|consen 221 HEVQPAYATRYAITVWYFD 239 (280)
T ss_pred cccccccccceEEEEEEec
Confidence 9999999876555565555
No 259
>KOG1461|consensus
Probab=30.88 E-value=3.5e+02 Score=32.54 Aligned_cols=113 Identities=19% Similarity=0.239 Sum_probs=70.2
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHh----ccCcceEEEEeCCCCCcH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNF----KTMFKNVKYIAHNSTVNS 363 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~----~~~y~~V~ii~~~~~~g~ 363 (734)
.++|+| .+|+-| .|.|++.|+.|.+.---. +|+.+| .+...+.+.+++. ...+.-+.++.+ +.++.
T Consensus 43 ~~~p~~--LLPlaN-VpmIdYtL~~L~~agV~e----Vfvfc~--~~~~qi~e~i~~sew~~~~~~~v~ti~s~-~~~S~ 112 (673)
T KOG1461|consen 43 LEKPRV--LLPLAN-VPMIDYTLEWLERAGVEE----VFVFCS--AHAAQIIEYIEKSEWYLPMSFIVVTICSG-ESRSV 112 (673)
T ss_pred cCCCce--EeeecC-chHHHHHHHHHHhcCceE----EEEEec--ccHHHHHHHHhhccccccccceEEEEcCC-CcCcH
Confidence 367999 778888 699999999999865332 666653 2334444444441 112334445555 45555
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH-------cCCceeeecccC
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN-------RNESLIAPLLVR 414 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~-------~nk~IVaP~l~~ 414 (734)
+.|....=+.++ ..+||++ +-+|++- | -.|+.+++ ++|.-|.-|+.+
T Consensus 113 GDamR~id~k~l-itgDFiL-Vsgd~vs-N-~pl~~~l~eHr~r~k~Dk~~iMTmv~k 166 (673)
T KOG1461|consen 113 GDAMRDIDEKQL-ITGDFIL-VSGDTVS-N-MPLRNVLEEHRKRRKEDKDAIMTMVFK 166 (673)
T ss_pred HHHHHHHHhcce-eecceEE-EeCCeee-c-CchHHHHHHHHHHhhhCccceEEEEEe
Confidence 555544433433 5688876 6678776 3 67777775 377788877754
No 260
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.86 E-value=89 Score=27.45 Aligned_cols=46 Identities=24% Similarity=0.352 Sum_probs=34.5
Q ss_pred HHHHHHHhhcC-CCCCeEEEEE----eccceeEeCC---HHHHHHHHhcCCCcE
Q psy14856 85 NLLKNELDEMD-ITDDMIILVT----DSYDVIIDGG---VNDILERFNTFDANI 130 (734)
Q Consensus 85 ~~l~~~L~~~~-~~~D~lvl~v----DsyDv~f~~~---~~~ll~rf~~~~~~i 130 (734)
-.+|.+|++-. +++|.+.+|. -||-|+|... .||+-+.|.++|++|
T Consensus 23 v~~kA~l~k~~L~dDde~aIfnI~gT~Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 23 VRLKAHLAKVDLNDDDELAIFNIEGTSSYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred HHHHHHhcccccCCCCcEEEEEecCceeEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 35666777643 3566687774 8999999876 488888999998875
No 261
>PLN02917 CMP-KDO synthetase
Probab=30.85 E-value=3.4e+02 Score=29.35 Aligned_cols=87 Identities=11% Similarity=0.213 Sum_probs=53.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe-C-CCCCcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA-H-NSTVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~-~-~~~~g~a~arN~al~~a~~~~~ 379 (734)
..|.|...++.+.+.. +.+. ++|..+ . +.+.+.+.+. .++++. + ....|-..+. .|++.. +...
T Consensus 71 GkPLL~~vi~~a~~~~-~~~~--VVV~~~---~-e~I~~~~~~~-----~v~vi~~~~~~~~GT~~~~-~a~~~l-~~~~ 136 (293)
T PLN02917 71 GKPMIQRTWERAKLAT-TLDH--IVVATD---D-ERIAECCRGF-----GADVIMTSESCRNGTERCN-EALKKL-EKKY 136 (293)
T ss_pred CEEHHHHHHHHHHcCC-CCCE--EEEECC---h-HHHHHHHHHc-----CCEEEeCCcccCCchHHHH-HHHHhc-cCCC
Confidence 4789999999999876 3333 334332 2 3344444432 234442 2 2333444453 565543 2357
Q ss_pred cEEEEECCCccCCChHHHHHHHH
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|+++++++|.=+-.+++|+.|++
T Consensus 137 d~Vlil~gD~PlI~~~tI~~li~ 159 (293)
T PLN02917 137 DIVVNIQGDEPLIEPEIIDGVVK 159 (293)
T ss_pred CEEEEecCCcCCCCHHHHHHHHH
Confidence 99999999997667999999997
No 262
>TIGR01753 flav_short flavodoxin, short chain. Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction.
Probab=30.69 E-value=2.4e+02 Score=26.01 Aligned_cols=58 Identities=12% Similarity=0.193 Sum_probs=40.4
Q ss_pred CCCcEEEEEEecCC--h--hHHHHHHHHHHcccCCCceEEEEEec-CCC---CcHHHHHHHHHHhc
Q psy14856 289 QFPSVLISVFIDKP--T--AFLEEFLNKIANLNYPAKKISMFVYN-NQE---YHAPLFDDYIHNFK 346 (734)
Q Consensus 289 ~~P~V~I~I~i~n~--~--~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D---~t~~il~~f~~~~~ 346 (734)
++..|.++.|+|+. . +.+..|++.|...+....++.+|--. +.. ...+.+.+++++.+
T Consensus 45 ~~d~iilgspty~~g~~p~~~~~~f~~~l~~~~~~gk~~~vfgt~g~~~~f~~~~~~~~~~l~~~g 110 (140)
T TIGR01753 45 SYDAVLLGCSTWGDEDLEQDDFEPFFEELEDIDLGGKKVALFGSGDWGYEFCEAVDDWEERLKEAG 110 (140)
T ss_pred cCCEEEEEcCCCCCCCCCcchHHHHHHHhhhCCCCCCEEEEEecCCCCchhhHHHHHHHHHHHHCC
Confidence 36789999999863 3 58899999998877777776555432 222 45666777776654
No 263
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=30.23 E-value=2.6e+02 Score=29.16 Aligned_cols=101 Identities=14% Similarity=0.196 Sum_probs=57.4
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHH----------HhccC-----------
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIH----------NFKTM----------- 348 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~----------~~~~~----------- 348 (734)
.|+-++ |+-.. |.|...|+++.+.... ++.|++... .+.+.+++. +.+..
T Consensus 21 ~pK~ll--pv~gk-pli~~~l~~l~~~gi~--~i~iv~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (267)
T cd02541 21 IPKEML--PIVDK-PVIQYIVEEAVAAGIE--DIIIVTGRG----KRAIEDHFDRSYELEETLEKKGKTDLLEEVRIISD 91 (267)
T ss_pred CCceee--EECCE-EHHHHHHHHHHHCCCC--EEEEEeCCc----hHHHHHHhCCcHHHHHHHHhcccHHHhhhhhcccC
Confidence 455544 34444 9999999999986433 343333221 122222221 11100
Q ss_pred cceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChH-HHHHHHH
Q psy14856 349 FKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPD-VLKYLVN 402 (734)
Q Consensus 349 y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~-tL~~LI~ 402 (734)
-..+.++..++..|-+.|-..|++.. ..+-++++.+|.++.+.+ .++.|++
T Consensus 92 ~~~i~~~~~~~~~Gt~~al~~~~~~i---~~~~~lv~~gD~~~~~~~~~~~~l~~ 143 (267)
T cd02541 92 LANIHYVRQKEPLGLGHAVLCAKPFI---GDEPFAVLLGDDLIDSKEPCLKQLIE 143 (267)
T ss_pred CceEEEEEcCCCCChHHHHHHHHHHh---CCCceEEEECCeEEeCCchHHHHHHH
Confidence 11445555555677777777776653 225677788999887554 7888886
No 264
>PLN03133 beta-1,3-galactosyltransferase; Provisional
Probab=29.30 E-value=1.1e+03 Score=28.66 Aligned_cols=156 Identities=11% Similarity=0.118 Sum_probs=72.6
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH-HHHhhhh-cCccEEEEECCCccCCChHHHHH
Q psy14856 322 KISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL-AVENSLH-KGVDFYFYVDSDSHLDNPDVLKY 399 (734)
Q Consensus 322 ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~-al~~a~~-~~~DYlf~vDAD~~L~np~tL~~ 399 (734)
++.++|..+.+ +.+++-+++....|.++-+..-.+.-..-..|-. ++..+.. .+++|++-+|-|+++. .+.|-.
T Consensus 420 ~~rFvVG~s~n---~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVn-v~~Ll~ 495 (636)
T PLN03133 420 AVRFFVGLHKN---QMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVR-VDEVLA 495 (636)
T ss_pred EEEEEEecCCc---HHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEc-HHHHHH
Confidence 33344444433 2344444444455666665544332211111111 2333333 4679999999999996 665544
Q ss_pred HHHcCCceeeecccCCCcccccccccc----c-CCccccchHHHHHHHhcccCCcceeeeceeee-EEeeehhhHhhccc
Q psy14856 400 LVNRNESLIAPLLVRPFKAWSNFWGAL----N-ADGFYARSFDYMNIINGDQGGKGIWNVPYITN-CYLMKTSVIKATNI 473 (734)
Q Consensus 400 LI~~nk~IVaP~l~~~~~~wsNFWgal----~-~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~ 473 (734)
.++..+. +++-+|..++... . ..-+|.-.++| ++-.=-||+++ .|++++++++. ..
T Consensus 496 ~L~~~~~-------~~~Ly~G~v~~~~~PiRd~~sKWYVs~~ey----------p~~~YPpYasG~gYVlS~Dla~~-L~ 557 (636)
T PLN03133 496 SLKRTNV-------SHGLLYGLINSDSQPHRNPDSKWYISPEEW----------PEETYPPWAHGPGYVVSRDIAKE-VY 557 (636)
T ss_pred HHHhcCC-------CCceEEEEeccCCCcccCCCCCCCCCHHHC----------CCCCCCCCCCcCEEEEcHHHHHH-HH
Confidence 4432110 0011111111110 0 11234344454 12112366665 89999999986 21
Q ss_pred c--c-ccccCCCchhHHHHHHHH---HcCeeE
Q psy14856 474 K--T-IYTLNSMDYDMAFCTNLR---NKGIHL 499 (734)
Q Consensus 474 ~--~-~f~~~~~deDm~Fc~~ar---~~Gi~m 499 (734)
. . ......--||..+..-++ +.|+..
T Consensus 558 ~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v 589 (636)
T PLN03133 558 KRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEV 589 (636)
T ss_pred HhhhhcccCcCChhhHhHHHHHHHhcccCCCc
Confidence 1 0 011222367777655543 456654
No 265
>KOG2287|consensus
Probab=29.14 E-value=8.3e+02 Score=27.14 Aligned_cols=186 Identities=15% Similarity=0.241 Sum_probs=92.4
Q ss_pred CcEEEEEEecCChhHHH-HHHHHH-HcccC-CCceEE-EEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 291 PSVLISVFIDKPTAFLE-EFLNKI-ANLNY-PAKKIS-MFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~-~fL~sL-~~LdY-Pk~ri~-l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
|.++|+|... +.+|=. +.++.- .+..+ ...++. +|+.. ..+.. .+++.+.+....|.++-+..-.+.-..-.
T Consensus 95 ~~lLl~V~S~-~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~--~~~~~l~~Ea~~ygDIi~~df~Dty~nlt 171 (349)
T KOG2287|consen 95 PELLLLVKSA-PDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNED--KLNKLLADEARLYGDIIQVDFEDTYFNLT 171 (349)
T ss_pred ceEEEEEecC-CCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHH--HHHHHHHHHHHHhCCEEEEecccchhchH
Confidence 5677766654 334422 222211 11111 123354 55554 22222 44666666666777877776655544333
Q ss_pred HHHH-----HHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCC-c----eeeecccCCCcccccccccccCCccccch
Q psy14856 366 ARNL-----AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNE-S----LIAPLLVRPFKAWSNFWGALNADGFYARS 435 (734)
Q Consensus 366 arN~-----al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk-~----IVaP~l~~~~~~wsNFWgal~~~GyY~Rs 435 (734)
.+-. +-..| ..++|++=+|.|+++. ++-|-.++++.. + +.+-+... ...-.+. ..-+|--.
T Consensus 172 lKtl~~l~w~~~~c--p~akfi~K~DDDvfv~-~~~L~~~L~~~~~~~~~~~~G~v~~~-~~p~R~~-----~~KwyVp~ 242 (349)
T KOG2287|consen 172 LKTLAILLWGVSKC--PDAKFILKIDDDVFVN-PDNLLEYLDKLNDPSSDLYYGRVIQN-APPIRDK-----TSKWYVPE 242 (349)
T ss_pred HHHHHHHHHHHhcC--CcceEEEeccCceEEc-HHHHHHHHhccCCCCcceEEEeeccc-CCCCCCC-----CCCCccCH
Confidence 3333 33333 4789999999999996 777777776543 1 11111110 0000000 00123333
Q ss_pred HHHHHHHhcccCCcceeeeceeee-EEeeehhhHhhcccc-cccccCCCchhHHHHHHHHHc-CeeE
Q psy14856 436 FDYMNIINGDQGGKGIWNVPYITN-CYLMKTSVIKATNIK-TIYTLNSMDYDMAFCTNLRNK-GIHL 499 (734)
Q Consensus 436 edy~~i~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~~-~~f~~~~~deDm~Fc~~ar~~-Gi~m 499 (734)
+.| +...=.||.++ .|+|.+++.+. ... .....-..-||.-+..-+++. ||.-
T Consensus 243 ~~y----------~~~~YP~Y~sG~gYvis~~~a~~-l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~ 298 (349)
T KOG2287|consen 243 SEY----------PCSVYPPYASGPGYVISGDAARR-LLKASKHLKFFPIEDVFVGGCLAEDLGIKP 298 (349)
T ss_pred HHC----------CCCCCCCcCCCceeEecHHHHHH-HHHHhcCCCccchHHHHHHHHHHHhcCCCc
Confidence 333 11112355554 78999999886 333 111112247888887777776 5543
No 266
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=29.08 E-value=3.6e+02 Score=27.27 Aligned_cols=99 Identities=11% Similarity=0.158 Sum_probs=55.1
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhc-cCc--ceEEEEeCCCCCcHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFK-TMF--KNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~-~~y--~~V~ii~~~~~~g~a~a 366 (734)
.|+-++- +-| .|.|...++++.+.. -.++.+.+ +. ...+.+++++++.. ... ..+.++...+..|-+.+
T Consensus 21 ~pK~Llp--v~g-~pli~~~l~~l~~~g--~~~iivv~--~~-~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~gt~~a 92 (214)
T cd04198 21 IPKALLP--VAN-KPMIWYPLDWLEKAG--FEDVIVVV--PE-EEQAEISTYLRSFPLNLKQKLDEVTIVLDEDMGTADS 92 (214)
T ss_pred CCcccCE--ECC-eeHHHHHHHHHHHCC--CCeEEEEE--CH-HHHHHHHHHHHhcccccCcceeEEEecCCCCcChHHH
Confidence 4554433 334 499999999999853 33443333 21 23455666665431 011 12333444556676666
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
-..+.+.. . +.++++.+|.+ . +..+..+++
T Consensus 93 l~~~~~~i---~-~d~lv~~~D~i-~-~~~l~~~l~ 122 (214)
T cd04198 93 LRHIRKKI---K-KDFLVLSCDLI-T-DLPLIELVD 122 (214)
T ss_pred HHHHHhhc---C-CCEEEEeCccc-c-ccCHHHHHH
Confidence 66665542 3 44788899965 4 345666665
No 267
>PLN02769 Probable galacturonosyltransferase
Probab=29.06 E-value=1.1e+02 Score=36.59 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=40.0
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCC---CCCCcccccceeeeeHHHHHH
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAV---GSGYRYLNSGGFIGYAKDIKE 172 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~---~~g~R~LNSG~~iG~a~~l~~ 172 (734)
=||+.|+ |||++.+.++|.+- +++..++ +|=..|+-.......|-.. .....|.|||-.+=-....++
T Consensus 454 KVLYLD~-DVVVqgDLseLw~i--DL~gkvi-AAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLLINL~~WRk 524 (629)
T PLN02769 454 KVVVLDD-DVVVQRDLSFLWNL--DMGGKVN-GAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRE 524 (629)
T ss_pred eEEEEeC-CEEecCcHHHHhcC--CCCCCeE-EEehhhhhhhhhhhhhhcccCCCccccccccCeeEeeHHHHHH
Confidence 5788898 99999999999743 5666654 4434574211111112110 112346799988766655553
No 268
>PLN03181 glycosyltransferase; Provisional
Probab=28.54 E-value=44 Score=37.97 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=18.3
Q ss_pred cCccEEEEECCCccCCChHH
Q psy14856 377 KGVDFYFYVDSDSHLDNPDV 396 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~t 396 (734)
..++|++++|+|++++||+.
T Consensus 197 PeAEWfWWLDsDALIMNp~~ 216 (453)
T PLN03181 197 PEAEWIWWVDSDAVFTDMDF 216 (453)
T ss_pred CCceEEEEecCCceeecCCC
Confidence 78999999999999999864
No 269
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=28.44 E-value=1.9e+02 Score=32.27 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=25.1
Q ss_pred CCCCccccCC------ceEEEEEecCCCCcCCCccEEEee
Q psy14856 658 PSLRPHHDSS------TYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 658 ~~l~~H~D~S------~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
..|.+|+|.+ .+++.-|+.. +=+||+|.|..
T Consensus 177 ~~l~~HtD~~y~~~pp~~~~L~c~~~---~~~GG~t~~~d 213 (362)
T TIGR02410 177 LAIDMHTDGTYWDETPGLQLFHCLTH---DGTGGETVLVD 213 (362)
T ss_pred CCccccccCCCCCCCCcceeEeeeec---CCCCCceeeee
Confidence 3688999975 4888889987 34999999965
No 270
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=28.39 E-value=4.1e+02 Score=29.04 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=56.8
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+.++-+ -+. +.|...|+++.+.. -.++.+.+ . .. ..+.+++.+.+....-..+.++..++..|-+.+--.
T Consensus 20 ~pK~l~pv--~g~-pli~~~l~~l~~~g--i~~i~vv~-~-~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~G~~~al~~ 91 (353)
T TIGR01208 20 RPKQLIPV--ANK-PILQYAIEDLAEAG--ITDIGIVV-G-PV-TGEEIKEIVGEGERFGAKITYIVQGEPLGLAHAVYT 91 (353)
T ss_pred CCccccEE--CCE-eHHHHHHHHHHHCC--CCEEEEEe-C-CC-CHHHHHHHHhcccccCceEEEEECCCCCCHHHHHHH
Confidence 45555544 344 99999999999864 34454433 1 11 445556655432111114455555556676666666
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|++.. ...+ ++++.+|.+++ ..++.|++
T Consensus 92 a~~~l--~~~~-~li~~gD~~~~--~~l~~l~~ 119 (353)
T TIGR01208 92 ARDFL--GDDD-FVVYLGDNLIQ--DGISRFVK 119 (353)
T ss_pred HHHhc--CCCC-EEEEECCeecC--ccHHHHHH
Confidence 66543 1335 45667999874 45666775
No 271
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=27.57 E-value=3.2e+02 Score=27.35 Aligned_cols=88 Identities=17% Similarity=0.183 Sum_probs=44.9
Q ss_pred cEEEEEeecCCCchHH-HHH-HHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEeccce
Q psy14856 33 KFLVITVASNETDGYK-RFI-QSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDV 110 (734)
Q Consensus 33 ~l~vltvat~~~~~~~-r~~-~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv 110 (734)
++.|+.|....+|+-. ..+ +.++.++..++++-..+ ..| .|...+...++..+.+-| +|+|.|+-++
T Consensus 28 ~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~--------~~G--~~~~a~n~g~~~a~~~~d-~i~~lD~D~~ 96 (236)
T cd06435 28 NFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEP--------LPG--AKAGALNYALERTAPDAE-IIAVIDADYQ 96 (236)
T ss_pred CcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCC--------CCC--CchHHHHHHHHhcCCCCC-EEEEEcCCCC
Confidence 4566777766676642 222 33333444454442211 112 244456666665443234 9999999543
Q ss_pred eEeCCHHHHHHHHhcCCCcEE
Q psy14856 111 IIDGGVNDILERFNTFDANIV 131 (734)
Q Consensus 111 ~f~~~~~~ll~rf~~~~~~il 131 (734)
+--.-.+++++.+++.+..+|
T Consensus 97 ~~~~~l~~l~~~~~~~~~~~v 117 (236)
T cd06435 97 VEPDWLKRLVPIFDDPRVGFV 117 (236)
T ss_pred cCHHHHHHHHHHhcCCCeeEE
Confidence 322223777777754344444
No 272
>PF09967 DUF2201: VWA-like domain (DUF2201); InterPro: IPR018698 This family of various hypothetical bacterial proteins has no known function.
Probab=26.84 E-value=63 Score=30.47 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=26.1
Q ss_pred CCccchHHHHHHHHhhcCCCCCeEEEEEeccc
Q psy14856 78 LGGGYKVNLLKNELDEMDITDDMIILVTDSYD 109 (734)
Q Consensus 78 ~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyD 109 (734)
-|||--.+-.-+++++.......+|+|||++-
T Consensus 63 GgGGTdf~pvf~~~~~~~~~~~~vi~fTDg~~ 94 (126)
T PF09967_consen 63 GGGGTDFRPVFEYLEENRPRPSVVIYFTDGEG 94 (126)
T ss_pred CCCCCcchHHHHHHHhcCCCCCEEEEEeCCCC
Confidence 47888999999999987766777788999754
No 273
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=26.76 E-value=4.2e+02 Score=25.58 Aligned_cols=91 Identities=13% Similarity=0.229 Sum_probs=49.4
Q ss_pred cEEEEEeecCCCch-HHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 33 KFLVITVASNETDG-YKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 33 ~l~vltvat~~~~~-~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
.+.|+.+.+..+++ ....+++-......+.++-..+ ...+.+.+...++..+ .| .|+|.|+-|++
T Consensus 31 ~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~a~n~g~~~a~--~d-~i~~ld~D~~~ 96 (202)
T cd04184 31 NWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREE-----------NGGISAATNSALELAT--GE-FVALLDHDDEL 96 (202)
T ss_pred CeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEccc-----------CCCHHHHHHHHHHhhc--CC-EEEEECCCCcC
Confidence 45666666666664 3344443222222333331111 1112334444454332 35 99999997755
Q ss_pred EeCCHHHHHHHH-hcCCCcEEEccCCc
Q psy14856 112 IDGGVNDILERF-NTFDANIVFGAERL 137 (734)
Q Consensus 112 f~~~~~~ll~rf-~~~~~~ilfsae~~ 137 (734)
-..-.+.+++.+ ...+..++++....
T Consensus 97 ~~~~l~~~~~~~~~~~~~~~v~~~~~~ 123 (202)
T cd04184 97 APHALYEVVKALNEHPDADLIYSDEDK 123 (202)
T ss_pred ChHHHHHHHHHHHhCCCCCEEEccHHh
Confidence 444458999998 55677788765543
No 274
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=26.67 E-value=5.5e+02 Score=25.57 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=60.5
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
+..+.|...++++.+.. -+++ +|..+ .+.+.++.++++. +. .+. .....|....-..|++.. ...+
T Consensus 25 ~GkplI~~vi~~l~~~~--i~~I--~Vv~~--~~~~~~~~~l~~~---~~--~~~-~~~g~G~~~~l~~al~~~--~~~~ 90 (183)
T TIGR00454 25 CGRCLIDHVLSPLLKSK--VNNI--IIATS--PHTPKTEEYINSA---YK--DYK-NASGKGYIEDLNECIGEL--YFSE 90 (183)
T ss_pred CCEEHHHHHHHHHHhCC--CCEE--EEEeC--CCHHHHHHHHhhc---Cc--EEE-ecCCCCHHHHHHHHhhcc--cCCC
Confidence 35799999999998765 2344 33322 2344566666442 11 222 245566666666666532 2357
Q ss_pred EEEEECCCccCCChHHHHHHHHc----CCceeeecc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL 412 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l 412 (734)
.++++-||.-+-.+++++.|++. +++..+.++
T Consensus 91 ~~lv~~~D~P~i~~~~i~~li~~~~~~~~~~~~~~~ 126 (183)
T TIGR00454 91 PFLVVSSDLINLRSKIIDSIVDYYYCIKAPALAVMI 126 (183)
T ss_pred CEEEEeCCcCcCCHHHHHHHHHHHHhcCCCceEEEe
Confidence 89999999965449999999973 445555444
No 275
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=26.52 E-value=2.1e+02 Score=31.80 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=65.1
Q ss_pred CcEEEEEeecCCCc-hHHHHHHHHHHcCCcc-eee--cc-Cccc---------CCC--C--CC--CCCccchHHHHHHHH
Q psy14856 32 DKFLVITVASNETD-GYKRFIQSAEVNKLQV-KTL--GL-HQPW---------LGG--D--MS--SLGGGYKVNLLKNEL 91 (734)
Q Consensus 32 ~~l~vltvat~~~~-~~~r~~~Sa~~~~y~~-~vl--g~-g~~W---------~gg--~--~~--~~ggg~Ki~~l~~~L 91 (734)
+++-|++|+=.|.. -+.+.++|+...+||. .|+ .- +++. ..- . .. +...+.|.+.+..+|
T Consensus 54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al~~~l 133 (439)
T COG1215 54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGALNNGL 133 (439)
T ss_pred CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHHHHHHH
Confidence 78999999999988 9999999999999984 333 21 1111 000 1 00 135667888898888
Q ss_pred hhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCc
Q psy14856 92 DEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDAN 129 (734)
Q Consensus 92 ~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ 129 (734)
...+ .| +|++.||-.+.--.-..+++..|.....-
T Consensus 134 ~~~~--~d-~V~~~DaD~~~~~d~l~~~~~~f~~~~~~ 168 (439)
T COG1215 134 KRAK--GD-VVVILDADTVPEPDALRELVSPFEDPPVG 168 (439)
T ss_pred hhcC--CC-EEEEEcCCCCCChhHHHHHHhhhcCCCee
Confidence 8754 34 99999996655444457777777765444
No 276
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=26.45 E-value=4.3e+02 Score=29.46 Aligned_cols=99 Identities=18% Similarity=0.303 Sum_probs=67.4
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
.|+-++-|. | .|.|+..|++|.+.- -.++.|. ..+..+.++++..+....-..+.++...+.+|-+.+--.
T Consensus 22 ~PKPllpI~--g-kPii~~~l~~L~~~G--v~eivi~----~~y~~~~i~~~~~d~~~~~~~I~y~~e~~~lGTag~l~~ 92 (358)
T COG1208 22 RPKPLLPIA--G-KPLIEYVLEALAAAG--VEEIVLV----VGYLGEQIEEYFGDGEGLGVRITYVVEKEPLGTAGALKN 92 (358)
T ss_pred CCcccceeC--C-ccHHHHHHHHHHHCC--CcEEEEE----eccchHHHHHHHhcccccCCceEEEecCCcCccHHHHHH
Confidence 344444333 4 599999999999844 3344333 367778888877664332347788877777786666666
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|.+.- ..|=++++.+|++.+ -+ |+.|++
T Consensus 93 a~~~l---~~~~f~v~~GDv~~~-~d-l~~l~~ 120 (358)
T COG1208 93 ALDLL---GGDDFLVLNGDVLTD-LD-LSELLE 120 (358)
T ss_pred HHHhc---CCCcEEEEECCeeec-cC-HHHHHH
Confidence 66553 337788899999997 66 888886
No 277
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=26.39 E-value=94 Score=34.39 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhhhcCccEEEEECCCccCCChHH
Q psy14856 363 SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDV 396 (734)
Q Consensus 363 ~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~t 396 (734)
..+.|+.|.-.+ +.||++++|-|++..+...
T Consensus 79 ~~a~R~fGyL~s---~~~yivsiDDD~~P~~D~~ 109 (348)
T PF03214_consen 79 GDACRNFGYLVS---KKDYIVSIDDDCLPAKDDF 109 (348)
T ss_pred ccchhhhHhhhc---ccceEEEEccccccccCCc
Confidence 357899997654 5799999999999985443
No 278
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=26.27 E-value=3.9e+02 Score=30.38 Aligned_cols=104 Identities=9% Similarity=0.015 Sum_probs=58.5
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhcc----C-cceEEEEeCC-----
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKT----M-FKNVKYIAHN----- 358 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~----~-y~~V~ii~~~----- 358 (734)
..|+.++- +-+..+.|...|++|.+..-. ++.|++ .+..+.+.+++.+... . ...+.++.+.
T Consensus 35 ~~PK~llp--v~gkp~lI~~~l~~l~~~Gi~--~i~vv~----~~~~~~i~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 106 (425)
T PRK00725 35 KRAKPAVY--FGGKFRIIDFALSNCINSGIR--RIGVLT----QYKAHSLIRHIQRGWSFFREELGEFVDLLPAQQRVDE 106 (425)
T ss_pred CCcceeEE--ECCEEEEhHHHHHHHHHCCCC--eEEEEe----cCCHHHHHHHHHhhhcccccCCCCeEEEeCCcccCCC
Confidence 35666544 344456999999999986543 343333 2333444444433110 0 1123322211
Q ss_pred --CCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 359 --STVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 359 --~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
...|-+.|--.|++...+...|+++++.+|++.+ ..++.|++
T Consensus 107 e~~~lGTa~al~~a~~~l~~~~~d~~lVl~gD~l~~--~dl~~ll~ 150 (425)
T PRK00725 107 ENWYRGTADAVYQNLDIIRRYDPKYVVILAGDHIYK--MDYSRMLA 150 (425)
T ss_pred CccccCcHHHHHHHHHHHHhcCCCEEEEecCCeEec--cCHHHHHH
Confidence 1256677777777665434468999999999764 45777775
No 279
>PRK05568 flavodoxin; Provisional
Probab=26.22 E-value=2e+02 Score=26.98 Aligned_cols=56 Identities=13% Similarity=0.128 Sum_probs=34.9
Q ss_pred CCCcEEEEEEecCCh----hHHHHHHHHHHcccCCCceEEEEEec---CCCCcHHHHHHHHHHhc
Q psy14856 289 QFPSVLISVFIDKPT----AFLEEFLNKIANLNYPAKKISMFVYN---NQEYHAPLFDDYIHNFK 346 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~----~~L~~fL~sL~~LdYPk~ri~l~I~n---s~D~t~~il~~f~~~~~ 346 (734)
++-.|.++.|+|+.. ..+..|++.+... .+..++ .++.+ +.....+.+.+.+++.+
T Consensus 48 ~~d~iilgsp~y~~~~~~~~~~~~f~~~~~~~-~~~k~~-~~f~t~G~~~~~~~~~~~~~l~~~g 110 (142)
T PRK05568 48 GADVVALGSPAMGDEVLEEGEMEPFVESISSL-VKGKKL-VLFGSYGWGDGEWMRDWVERMEGYG 110 (142)
T ss_pred hCCEEEEECCccCcccccchhHHHHHHHhhhh-hCCCEE-EEEEccCCCCChHHHHHHHHHHHCC
Confidence 456899999998743 4688898888543 344444 44444 22345666666665543
No 280
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=26.20 E-value=3.7e+02 Score=32.90 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=57.4
Q ss_pred CcEEEEEeecCCCchH-HHHHHHHHHcCCc---ce--eeccCcc--------------------cC------CCC--CCC
Q psy14856 32 DKFLVITVASNETDGY-KRFIQSAEVNKLQ---VK--TLGLHQP--------------------WL------GGD--MSS 77 (734)
Q Consensus 32 ~~l~vltvat~~~~~~-~r~~~Sa~~~~y~---~~--vlg~g~~--------------------W~------gg~--~~~ 77 (734)
+.+-|+.|+=+|.... .+.++|+....|| .+ |+.-|.. ++ |-. .+.
T Consensus 131 P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~ 210 (713)
T TIGR03030 131 PTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRP 210 (713)
T ss_pred CeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECC
Confidence 5678888888777665 5799999999998 33 4433310 00 000 123
Q ss_pred CCccchHHHHHHHHhhcCCCCCeEEEEEeccceeEeCC-HHHHHHHHhc
Q psy14856 78 LGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGG-VNDILERFNT 125 (734)
Q Consensus 78 ~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~-~~~ll~rf~~ 125 (734)
.+.+.|-..|..+|+..+ .| +|++.|+-+++ ... .++++..|.+
T Consensus 211 ~n~~~KAgnLN~al~~a~--gd-~Il~lDAD~v~-~pd~L~~~v~~f~~ 255 (713)
T TIGR03030 211 RNVHAKAGNINNALKHTD--GE-LILIFDADHVP-TRDFLQRTVGWFVE 255 (713)
T ss_pred CCCCCChHHHHHHHHhcC--CC-EEEEECCCCCc-ChhHHHHHHHHHHh
Confidence 345678788888887653 34 99999995554 333 3677777754
No 281
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=26.11 E-value=3.4e+02 Score=30.56 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCc-ceEEEEe--C-CC-----
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMF-KNVKYIA--H-NS----- 359 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y-~~V~ii~--~-~~----- 359 (734)
..|+.++ |+-+..|.|+..|++|.+..--+ +.|.+ -+..+.+.+++.+..... ..+.++. + .+
T Consensus 25 ~~PK~ll--Pv~gk~plI~~~L~~l~~~Gi~~--i~iv~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (407)
T PRK00844 25 DRAKPAV--PFGGSYRLIDFVLSNLVNSGYLR--IYVLT----QYKSHSLDRHISQTWRLSGLLGNYITPVPAQQRLGKR 96 (407)
T ss_pred CCcccce--eeCCcceEhHHHHHHHHHCCCCE--EEEEe----ccCHHHHHHHHHhCcCccccCCCeEEECCcccCCCCC
Confidence 3465544 44454589999999999975443 43434 234455555554221100 0111221 1 11
Q ss_pred -CCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 360 -TVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 360 -~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.+|-+.|-..|++.......|+++++.+|++.+ ..++.|++
T Consensus 97 ~~lGta~al~~a~~~i~~~~~~~~lv~~gD~v~~--~dl~~l~~ 138 (407)
T PRK00844 97 WYLGSADAIYQSLNLIEDEDPDYVVVFGADHVYR--MDPRQMVD 138 (407)
T ss_pred cccCCHHHHHHHHHHHHhcCCCEEEEecCCEEEc--CCHHHHHH
Confidence 356677777777765433458999999998763 45556665
No 282
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=25.87 E-value=3.9e+02 Score=25.31 Aligned_cols=89 Identities=19% Similarity=0.290 Sum_probs=54.1
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI 111 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~ 111 (734)
....|+.+....+++....+++.....-.+.++-..+ ..| +...+...++.-.. | .|+|.|+.|++
T Consensus 27 ~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~--------n~G---~~~a~n~g~~~a~g--d-~i~~lD~D~~~ 92 (185)
T cd04179 27 YDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSR--------NFG---KGAAVRAGFKAARG--D-IVVTMDADLQH 92 (185)
T ss_pred CCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccC--------CCC---ccHHHHHHHHHhcC--C-EEEEEeCCCCC
Confidence 4567777777777887777776654332333332111 112 44556666665432 4 99999997765
Q ss_pred EeCCHHHHHHHHhcCCCcEEEcc
Q psy14856 112 IDGGVNDILERFNTFDANIVFGA 134 (734)
Q Consensus 112 f~~~~~~ll~rf~~~~~~ilfsa 134 (734)
.-.-.+++++...+.+..++++.
T Consensus 93 ~~~~l~~l~~~~~~~~~~~v~g~ 115 (185)
T cd04179 93 PPEDIPKLLEKLLEGGADVVIGS 115 (185)
T ss_pred CHHHHHHHHHHHhccCCcEEEEE
Confidence 33334777777666677777766
No 283
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=25.85 E-value=1.1e+02 Score=32.10 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=26.7
Q ss_pred CCCCCCccccCC------ceEEEEEecCCCCcCCCccEEEee
Q psy14856 656 EQPSLRPHHDSS------TYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 656 ~~~~l~~H~D~S------~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
....|.+|+|.| .+.+.-|+.. +-+||.|.|..
T Consensus 92 t~~~l~~HtD~~y~~~pp~~~~L~cl~~---~~~GG~T~~vd 130 (262)
T cd00250 92 TNTLLPLHTDLAYHEYRPGLQILHCLRN---TATGGATLLVD 130 (262)
T ss_pred ccCCcCccccCCCCCCCCceEEEEEecc---CCCCCcceeee
Confidence 345688999975 6999999988 45799999964
No 284
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=25.48 E-value=1.6e+02 Score=31.18 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=54.7
Q ss_pred EEEEEe-cCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHH
Q psy14856 294 LISVFI-DKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVE 372 (734)
Q Consensus 294 ~I~I~i-~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~ 372 (734)
+|+|.+ ++....|...++++.+..+=.+-+.+| |+ +....-...|.. ....|+++..+.+. ..|.-.-
T Consensus 2 Tvvi~t~~~R~~~L~~~l~~l~~~~~l~~IvVvW--n~-~~~~P~~~~~~~----~~vpV~~~~~~~ns----LnnRF~p 70 (247)
T PF09258_consen 2 TVVINTSYKRSDLLKRLLRHLASSPSLRKIVVVW--NN-PNPPPPSSKWPS----TGVPVRVVRSSRNS----LNNRFLP 70 (247)
T ss_dssp EEEEEE-SS-HHHHHHHHHHHTTSTTEEEEEEEE--E--TS--THHHHHT-------S-EEEEEESSHH----GGGGGS-
T ss_pred EEEEEecccchHHHHHHHHHHHcCCCCCeEEEEe--CC-CCCCCcccccCC----CCceEEEEecCCcc----HHhcCcC
Confidence 466666 889999999999998887644332222 33 332221222322 12478888765431 1222111
Q ss_pred hhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 373 NSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 373 ~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
. .+...|-+|++|-|+.+. ++.|+...+
T Consensus 71 ~-~~i~T~AVl~~DDDv~~~-~~~l~faF~ 98 (247)
T PF09258_consen 71 D-PEIETDAVLSLDDDVMLS-CDELEFAFQ 98 (247)
T ss_dssp --TT--SSEEEEEETTEEE--HHHHHHHHH
T ss_pred c-cccCcceEEEecCCcccC-HHHHHHHHH
Confidence 1 125789999999999997 999998886
No 285
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=25.29 E-value=5.6e+02 Score=26.66 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=57.1
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
-.|.|...|+.+.+-..-. +|. |..+ +...+.+++++.+ ..++++.+...+. +.--.||+.. +..+|+
T Consensus 27 Gkpvl~~tl~~f~~~~~i~-~Iv--vv~~-~~~~~~~~~~~~~-----~~v~iv~GG~tR~--~SV~ngL~~l-~~~~d~ 94 (221)
T PF01128_consen 27 GKPVLEYTLEAFLASPEID-EIV--VVVP-PEDIDYVEELLSK-----KKVKIVEGGATRQ--ESVYNGLKAL-AEDCDI 94 (221)
T ss_dssp TEEHHHHHHHHHHTTTTES-EEE--EEES-GGGHHHHHHHHHH-----TTEEEEE--SSHH--HHHHHHHHCH-HCTSSE
T ss_pred CeEeHHHHHHHHhcCCCCC-eEE--EEec-chhHHHHHHhhcC-----CCEEEecCChhHH--HHHHHHHHHH-HcCCCE
Confidence 4689999999998754432 332 2222 2334556666665 4677776544321 1112233322 245699
Q ss_pred EEEECCCccCCChHHHHHHHHc---CCceeeecc
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVNR---NESLIAPLL 412 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~~---nk~IVaP~l 412 (734)
+++-||===+-.++.|..+++. +...+.|.+
T Consensus 95 VlIHDaaRPfv~~~~i~~~i~~~~~~~~aai~~~ 128 (221)
T PF01128_consen 95 VLIHDAARPFVSPELIDRVIEAAREGHGAAIPAL 128 (221)
T ss_dssp EEEEETTSTT--HHHHHHHHHHHHHTCSEEEEEE
T ss_pred EEEEccccCCCCHHHHHHHHHHHHhhcCcEEEEE
Confidence 9999987755559999999973 345555544
No 286
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=25.24 E-value=6.4e+02 Score=26.55 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.+.|+..|+.+....- =++|. |..+.+. .+.++++.. ...-+.|+++.+.+.+ .+---.|++...+...||+
T Consensus 32 ~pll~~tl~~f~~~~~-i~~Iv--vv~~~~~-~~~~~~~~~--~~~~~~v~~v~GG~~R--~~SV~~gL~~~~~~~~~~V 103 (230)
T COG1211 32 RPLLEHTLEAFLESPA-IDEIV--VVVSPED-DPYFEKLPK--LSADKRVEVVKGGATR--QESVYNGLQALSKYDSDWV 103 (230)
T ss_pred EEehHHHHHHHHhCcC-CCeEE--EEEChhh-hHHHHHhhh--hccCCeEEEecCCccH--HHHHHHHHHHhhccCCCEE
Confidence 5777888887775433 24443 3333211 122333332 1122357777554321 2222234433332468999
Q ss_pred EEECCCccCCChHHHHHHHHc
Q psy14856 383 FYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~~ 403 (734)
+.-||-==+..++.|+.+++.
T Consensus 104 lvHDaaRPf~~~~~i~~li~~ 124 (230)
T COG1211 104 LVHDAARPFLTPKLIKRLIEL 124 (230)
T ss_pred EEeccccCCCCHHHHHHHHHh
Confidence 999998766669999999964
No 287
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=24.81 E-value=5.7e+02 Score=26.43 Aligned_cols=100 Identities=10% Similarity=0.174 Sum_probs=55.1
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEE---------EeC--
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKY---------IAH-- 357 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~i---------i~~-- 357 (734)
..|+.++-+ -+ .|.|...++++.+..- ++|.+.+ + +..+.+++++.+....-..+++ ..+
T Consensus 18 ~~pK~llpv--~~-~p~i~~~~~~~~~~gi--~~i~iv~-~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
T cd02524 18 LKPKPMVEI--GG-RPILWHIMKIYSHYGH--NDFILCL-G---YKGHVIKEYFLNYFLHNSDVTIDLGTNRIELHNSDI 88 (253)
T ss_pred CCCceEEEE--CC-EEHHHHHHHHHHhCCC--ceEEEEC-C---CCHHHHHHHHHhhhhhcCceeEeecccceeeecccc
Confidence 356665543 33 4699999999988743 3343333 2 3346667776553211112222 211
Q ss_pred ----------CCCCcHHHHHHHHHHhhhhcCc-cEEEEECCCccCCChHHHHHHHH
Q psy14856 358 ----------NSTVNSKEARNLAVENSLHKGV-DFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 358 ----------~~~~g~a~arN~al~~a~~~~~-DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
.+..+.+.|.-.|++.. .. |+++++++|++.+ .+. +.|++
T Consensus 89 ~~~~~~~~~~~~~~~t~~al~~a~~~~---~~~~~~lv~~gD~i~~-~dl-~~ll~ 139 (253)
T cd02524 89 EDWKVTLVDTGLNTMTGGRLKRVRRYL---GDDETFMLTYGDGVSD-VNI-NALIE 139 (253)
T ss_pred cccceeecccCcccccHHHHHHHHHhc---CCCCeEEEEcCCEEEC-CCH-HHHHH
Confidence 11223344444454443 33 8999999999875 665 77775
No 288
>PLN03183 acetylglucosaminyltransferase family protein; Provisional
Probab=24.58 E-value=9.5e+02 Score=27.68 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=63.7
Q ss_pred CCCcEEEEEEec-CChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHH--hccCcceEEEEeCCCC--Cc
Q psy14856 289 QFPSVLISVFID-KPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHN--FKTMFKNVKYIAHNST--VN 362 (734)
Q Consensus 289 ~~P~V~I~I~i~-n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~--~~~~y~~V~ii~~~~~--~g 362 (734)
..|++.-.|.++ ++.+-+.+ -|.+++.|+..+-|-|+. +.+.-...+.+.++. ....+.+|.++..... .|
T Consensus 76 ~~~r~AYLI~~h~~d~~~l~R---LL~aLYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~vl~k~~~V~WG 152 (421)
T PLN03183 76 KLPRFAYLVSGSKGDLEKLWR---TLRALYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYMITKANLVTYR 152 (421)
T ss_pred CCCeEEEEEEecCCcHHHHHH---HHHHhcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEEEecceeeccC
Confidence 468999999998 55455444 445567788877666665 333222223333322 1234668888764321 12
Q ss_pred ---HHHHHHHHHHhhhh--cCccEEEEECCCccC--CChHHHHHHHHcC--Cceee
Q psy14856 363 ---SKEARNLAVENSLH--KGVDFYFYVDSDSHL--DNPDVLKYLVNRN--ESLIA 409 (734)
Q Consensus 363 ---~a~arN~al~~a~~--~~~DYlf~vDAD~~L--~np~tL~~LI~~n--k~IVa 409 (734)
-.+|-=.+++.+++ .+.||+..+-+..+. ++.+.+..+...+ +..|.
T Consensus 153 G~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~ 208 (421)
T PLN03183 153 GPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIE 208 (421)
T ss_pred ChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeee
Confidence 12222223333322 577999999888765 3223355555544 34443
No 289
>PRK10018 putative glycosyl transferase; Provisional
Probab=24.31 E-value=4.7e+02 Score=28.05 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=55.0
Q ss_pred CcEEEEEeecCCCchHHHHHHHHHHcCCc-ce--eeccCcc-------cCC--CC------CCCCCccchHHHHHHHHhh
Q psy14856 32 DKFLVITVASNETDGYKRFIQSAEVNKLQ-VK--TLGLHQP-------WLG--GD------MSSLGGGYKVNLLKNELDE 93 (734)
Q Consensus 32 ~~l~vltvat~~~~~~~r~~~Sa~~~~y~-~~--vlg~g~~-------W~g--g~------~~~~ggg~Ki~~l~~~L~~ 93 (734)
+.+.|++|+=++...+.+.++|.....|+ .. |+.-|.. |.. ++ .....+| .-..+...++.
T Consensus 5 p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n~G-~~~a~N~gi~~ 83 (279)
T PRK10018 5 PLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSG-ACAVRNQAIML 83 (279)
T ss_pred CEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCCCC-HHHHHHHHHHH
Confidence 45667777777777777777777655553 22 3322221 000 00 0011111 22233445554
Q ss_pred cCCCCCeEEEEEeccceeEeCCHHHHHHHHhc-CCCcEEEccCCcc
Q psy14856 94 MDITDDMIILVTDSYDVIIDGGVNDILERFNT-FDANIVFGAERLC 138 (734)
Q Consensus 94 ~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~-~~~~ilfsae~~c 138 (734)
-. -| .|+|.|+-|.+.-.-.+.+++...+ ....++++.+..|
T Consensus 84 a~--g~-~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (279)
T PRK10018 84 AQ--GE-YITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVC 126 (279)
T ss_pred cC--CC-EEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceee
Confidence 32 34 9999999888865445777777666 3446667665433
No 290
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=24.27 E-value=1.3e+02 Score=30.00 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=37.1
Q ss_pred CCcceeEEEEcCCCCCCCCccccCCceE-----EEEEecCCCCcCCCccEEEeeccceeecccceeEEEeCCC
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHDSSTYT-----INIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGR 710 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D~S~~T-----~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G~al~h~g~ 710 (734)
..+-..|-.|.++ .++++|.|.++.. +.|.|+.+- .|.=|+..-.+...++ ..+.|.++|..|.
T Consensus 93 ~~n~~LvN~Y~~G--d~mg~H~D~~e~~~~~pI~SvSLG~~r-~F~~~~~~~~~~~~~l-~L~sGsllvM~G~ 161 (169)
T TIGR00568 93 QPDACLVNRYAPG--ATLSLHQDRDEPDLRAPLLSVSLGLPA-IFLIGGLKRNDPPKRL-RLHSGDVVIMGGE 161 (169)
T ss_pred CCCEEEEEeecCC--CccccccccccccCCCCEEEEeCCCCE-EEEecCCcCCCceEEE-EeCCCCEEEECCc
Confidence 4667889999988 4799999987653 566666522 2321111100111222 3667777777664
No 291
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=24.18 E-value=3.6e+02 Score=26.65 Aligned_cols=76 Identities=12% Similarity=0.262 Sum_probs=44.8
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC-CcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST-VNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~-~g~a~arN~al~~a~~~~~ 379 (734)
+...+++++|+...+-++ + +|+.- .+++.+++..++....|+.++++..... .+.... ...++...+...
T Consensus 30 ~g~dl~~~ll~~~~~~~~---~--v~llG---~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~-~~i~~~I~~~~p 100 (171)
T cd06533 30 TGSDLMPALLELAAQKGL---R--VFLLG---AKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEE-EEIIERINASGA 100 (171)
T ss_pred CcHHHHHHHHHHHHHcCC---e--EEEEC---CCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhH-HHHHHHHHHcCC
Confidence 347888889888886543 3 44433 3456666666666677999999873222 222211 113444444677
Q ss_pred cEEEEE
Q psy14856 380 DFYFYV 385 (734)
Q Consensus 380 DYlf~v 385 (734)
|++|+-
T Consensus 101 div~vg 106 (171)
T cd06533 101 DILFVG 106 (171)
T ss_pred CEEEEE
Confidence 887753
No 292
>KOG3889|consensus
Probab=24.11 E-value=1.3e+02 Score=32.54 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=49.2
Q ss_pred cccCeeeec-cchHHHHHHHHHHhhchhhhhhhcCC--CCCCCCCcceeEEEEcCCCCCCCCccccCCce------EEEE
Q psy14856 603 PTRDIHMKQ-VGLAGVWAEFLRKYVVPLQEREFIGY--HHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTY------TINI 673 (734)
Q Consensus 603 pt~di~~~~-~g~~~~~~~~l~~~v~P~~~~~f~~~--~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S~~------T~ni 673 (734)
-.|||.+.| +.-...-...+.++|.|+-...|+.. ++..+...+ .-| ..-.|++|+|++-| -+-=
T Consensus 135 v~YGi~fvd~V~pT~e~TEkl~~r~~pv~~TffG~mW~Fsd~p~~~D---TAY---tkl~lg~HTD~TYF~~~~GiQvfH 208 (371)
T KOG3889|consen 135 VKYGIIFVDGVEPTSEATEKLCQRLVPVHDTFFGQMWVFSDEPAYED---TAY---TKLELGPHTDGTYFDQTPGIQVFH 208 (371)
T ss_pred HheeEEEEcCCCchhHHHHHHHHHhhHHHHhhhheeEEecCCCcccc---ccc---eeeeecccCCCceeccCCCceEEE
Confidence 346655544 33334455667889999999888652 121111111 122 23359999998754 4666
Q ss_pred EecCCCCcCCCccEEEee
Q psy14856 674 ALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 674 ~Ln~~~~dfeGGg~~F~~ 691 (734)
||... =+||.|.|..
T Consensus 209 Cl~h~---gtGG~t~lVD 223 (371)
T KOG3889|consen 209 CLTHA---GTGGDTVLVD 223 (371)
T ss_pred eeccc---CCCCceEEEe
Confidence 89884 4999999954
No 293
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.98 E-value=1.9e+02 Score=31.50 Aligned_cols=78 Identities=21% Similarity=0.154 Sum_probs=51.6
Q ss_pred CCcceeEEEEcCCCCCC----CCccccCC--------ceEEEEEecCCCCcCCCccEEEeec------------------
Q psy14856 643 RAPMSFVVRYRPDEQPS----LRPHHDSS--------TYTINIALNQVGVDYEGGGCRFIRY------------------ 692 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~----l~~H~D~S--------~~T~ni~Ln~~~~dfeGGg~~F~~~------------------ 692 (734)
..++.++..=.|+.|.. -++|.|-. .+.+-|+|-+- .=+-|.|++.-.
T Consensus 112 ~~~~~~v~~~~~~~~~p~~~~t~~HqD~~~~~~~~~~lV~~wiAl~d~--~~dnGat~vvPgSH~~~~~~~r~d~~~y~~ 189 (299)
T COG5285 112 LLRHGHVLWKMPGFQKPGAVATRWHQDYPLVSPGYPALVNAWIALCDF--TEDNGATLVVPGSHKWDVIPERPDHETYLE 189 (299)
T ss_pred hccCCeEEEecCCCCCCcccccccccccccccCCccceEEEEEecccc--ccccCceEEEecccccccCCCCCCccchhh
Confidence 34566776666765555 88999932 36677777652 234566666311
Q ss_pred -cceeecccceeEEEeCCCcccccCcccCCcee
Q psy14856 693 -NCNVTATRMGWMLMHPGRLTHYHEGLQVTQGT 724 (734)
Q Consensus 693 -~~~v~~~~~G~al~h~g~lth~H~g~~vT~G~ 724 (734)
+-....-.+|.+|+|.|+| +|++..-++|.
T Consensus 190 ~~~~pv~lekGDallF~~~L--~HaA~aNrT~~ 220 (299)
T COG5285 190 RNAVPVELEKGDALLFNGSL--WHAAGANRTSA 220 (299)
T ss_pred hcceeeeecCCCEEEEcchh--hhhhhcCCCCc
Confidence 0112346899999999997 89999987773
No 294
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=23.85 E-value=7.7e+02 Score=24.95 Aligned_cols=96 Identities=13% Similarity=0.105 Sum_probs=57.0
Q ss_pred EEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhh
Q psy14856 295 ISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENS 374 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a 374 (734)
|+|++-.....+..+++.+.+-..+ ..|.++|.|..+ ....+++++++-.+ ..+.++.-.+..+.-...++..
T Consensus 3 iail~sg~gs~~~~ll~~~~~~~l~-~~I~~vi~~~~~---~~~~~~A~~~gip~---~~~~~~~~~~~~~~~~~~~~~l 75 (190)
T TIGR00639 3 IVVLISGNGSNLQAIIDACKEGKIP-ASVVLVISNKPD---AYGLERAAQAGIPT---FVLSLKDFPSREAFDQAIIEEL 75 (190)
T ss_pred EEEEEcCCChhHHHHHHHHHcCCCC-ceEEEEEECCcc---chHHHHHHHcCCCE---EEECccccCchhhhhHHHHHHH
Confidence 6777777788999999999887655 346555555433 23356776665322 2222221111111111223333
Q ss_pred hhcCccEEEEECCCccCCChHHHH
Q psy14856 375 LHKGVDFYFYVDSDSHLDNPDVLK 398 (734)
Q Consensus 375 ~~~~~DYlf~vDAD~~L~np~tL~ 398 (734)
++.+.|+++++.-.-++. ++.|+
T Consensus 76 ~~~~~D~iv~~~~~~il~-~~~l~ 98 (190)
T TIGR00639 76 RAHEVDLVVLAGFMRILG-PTFLS 98 (190)
T ss_pred HhcCCCEEEEeCcchhCC-HHHHh
Confidence 446899999999999997 77665
No 295
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members. are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A ....
Probab=23.85 E-value=5.8e+02 Score=26.11 Aligned_cols=107 Identities=13% Similarity=0.176 Sum_probs=59.2
Q ss_pred EEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCC-----------CCcHHHHHHHHHHhccCcceEEEEeCCC-C
Q psy14856 293 VLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQ-----------EYHAPLFDDYIHNFKTMFKNVKYIAHNS-T 360 (734)
Q Consensus 293 V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~-----------D~t~~il~~f~~~~~~~y~~V~ii~~~~-~ 360 (734)
..+...++-....++..++.+.. ...+.+.+++.-|+ +...+.+.+.++..+..-..|.+-.... .
T Consensus 56 ~~~~~~~~~~~~~i~~~~~~~~~--~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~v~~ak~~g~~v~~~~~~~~~ 133 (237)
T PF00682_consen 56 ARLQALCRANEEDIERAVEAAKE--AGIDIIRIFISVSDLHIRKNLNKSREEALERIEEAVKYAKELGYEVAFGCEDASR 133 (237)
T ss_dssp SEEEEEEESCHHHHHHHHHHHHH--TTSSEEEEEEETSHHHHHHHTCSHHHHHHHHHHHHHHHHHHTTSEEEEEETTTGG
T ss_pred cccceeeeehHHHHHHHHHhhHh--ccCCEEEecCcccHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCceEeCcccccc
Confidence 55556666667778887877754 45667777776543 2223344444433332222343332221 2
Q ss_pred CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 361 VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 361 ~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
.......+ ..+.+.+...|.+-+.|+.-.++ |+.+..|++.
T Consensus 134 ~~~~~~~~-~~~~~~~~g~~~i~l~Dt~G~~~-P~~v~~lv~~ 174 (237)
T PF00682_consen 134 TDPEELLE-LAEALAEAGADIIYLADTVGIMT-PEDVAELVRA 174 (237)
T ss_dssp SSHHHHHH-HHHHHHHHT-SEEEEEETTS-S--HHHHHHHHHH
T ss_pred ccHHHHHH-HHHHHHHcCCeEEEeeCccCCcC-HHHHHHHHHH
Confidence 22333333 33444446788999999999997 9988888864
No 296
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=23.16 E-value=87 Score=32.56 Aligned_cols=32 Identities=19% Similarity=0.474 Sum_probs=24.3
Q ss_pred cCccEEEEECCCccCCChHH-HHHHHHcCCcee
Q psy14856 377 KGVDFYFYVDSDSHLDNPDV-LKYLVNRNESLI 408 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~t-L~~LI~~nk~IV 408 (734)
..+||++|+|||+-+-||+. |++.|..+.+|+
T Consensus 40 ~~~~~vlflDaDigVvNp~~~iEefid~~~Di~ 72 (222)
T PF03314_consen 40 PEYDWVLFLDADIGVVNPNRRIEEFIDEGYDII 72 (222)
T ss_pred ccCCEEEEEcCCceeecCcccHHHhcCCCCcEE
Confidence 57899999999998888864 555555555554
No 297
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=23.02 E-value=7.7e+02 Score=27.47 Aligned_cols=93 Identities=12% Similarity=0.237 Sum_probs=51.7
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CC-CcHHHHHHHHHHhhhhcC
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-ST-VNSKEARNLAVENSLHKG 378 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~-~g~a~arN~al~~a~~~~ 378 (734)
+..++|+..++++... -+++ +|..+.+ .+.+++.. ..+.++... .. .|...+-..|++. .+
T Consensus 30 ~Gkpll~~~i~~l~~~---~~~i--ivvv~~~--~~~~~~~~-------~~~~~i~d~~~g~~G~~~si~~gl~~---~~ 92 (366)
T PRK14489 30 GGKPLIERVVDRLRPQ---FARI--HLNINRD--PARYQDLF-------PGLPVYPDILPGFQGPLSGILAGLEH---AD 92 (366)
T ss_pred CCeeHHHHHHHHHHhh---CCEE--EEEcCCC--HHHHHhhc-------cCCcEEecCCCCCCChHHHHHHHHHh---cC
Confidence 4579999999999742 2233 3322211 12222221 122333221 22 3444455555554 35
Q ss_pred ccEEEEECCCccCCChHHHHHHHHc----CCceeee
Q psy14856 379 VDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAP 410 (734)
Q Consensus 379 ~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP 410 (734)
.|++|++++|.=+-.+++++.|++. +..++.|
T Consensus 93 ~~~vlv~~~D~P~i~~~~i~~L~~~~~~~~~~~v~~ 128 (366)
T PRK14489 93 SEYLFVVACDTPFLPENLVKRLSKALAIEGADIAVP 128 (366)
T ss_pred CCcEEEeeCCcCCCCHHHHHHHHHHhhccCCeEEEE
Confidence 7999999999744349999999973 3345555
No 298
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=23.00 E-value=1.5e+02 Score=30.82 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=44.7
Q ss_pred HHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHH--HHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcE
Q psy14856 53 SAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKN--ELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANI 130 (734)
Q Consensus 53 Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~--~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~i 130 (734)
.|++.||++.+.- ...+++ .+|-...++ .+.++-..-| -|||.|+ |+-.. .|+..|+.|.+-+-.|
T Consensus 4 Y~~~~~Y~~~l~~-d~~~~C--------~~kd~fFrRHCvva~~L~~~~-~vlflDa-DigVv-Np~~~iEefid~~~Di 71 (222)
T PF03314_consen 4 YCKIHGYPFILAH-DTDFKC--------DQKDKFFRRHCVVAKILPEYD-WVLFLDA-DIGVV-NPNRRIEEFIDEGYDI 71 (222)
T ss_pred EeeccCCeEEEEe-cCCCCC--------cchhHHHHHHHHHHHHhccCC-EEEEEcC-Cceee-cCcccHHHhcCCCCcE
Confidence 3678999998773 333443 234444444 2233222234 9999999 76554 6788999999988888
Q ss_pred EEc
Q psy14856 131 VFG 133 (734)
Q Consensus 131 lfs 133 (734)
+|=
T Consensus 72 ~fy 74 (222)
T PF03314_consen 72 IFY 74 (222)
T ss_pred EEE
Confidence 874
No 299
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose. UGPase (UDP-Glucose Pyrophosphorylase) catalyzes the reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids, glycoproteins, and proteoglycans. UGPase is found in both prokaryotes and eukaryotes. Interestingly, while the prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity. This family consists of mainly eukaryotic UTP-glucose-1-phosphate uridylyltransferases.
Probab=22.90 E-value=7.8e+02 Score=26.96 Aligned_cols=122 Identities=15% Similarity=0.231 Sum_probs=75.4
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCC-CceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC----------
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYP-AKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN---------- 358 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYP-k~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~---------- 358 (734)
.|+.++-| .+...+++-.++.|.++.-- ...|-++|=+| +.|.+.+.+|++++...-..|......
T Consensus 21 ~pKg~~~v--~~~~s~l~l~~~~i~~l~~~~~~~iPl~iMtS-~~T~~~T~~~l~~~~~~~~~v~~F~Q~~~P~~~~~~~ 97 (300)
T cd00897 21 GPKSLIEV--RDGKTFLDLTVQQIEHLNKTYGVDVPLVLMNS-FNTDEDTKKILKKYAGVNVDIHTFNQSRYPRISKETL 97 (300)
T ss_pred CCceeeec--CCCCcHHHHHHHHHHHHHHHcCCCceEEEECC-CcchHHHHHHHHHcCCCccCeEEEecCCcccCccccC
Confidence 47766655 56778999999988876421 23465666665 455556677777775311122222100
Q ss_pred -------CC--C-----c----HHHHHHH-HHHhhhhcCccEEEEECCCccC--CChHHHHHHHHcCCceeeecccC
Q psy14856 359 -------ST--V-----N----SKEARNL-AVENSLHKGVDFYFYVDSDSHL--DNPDVLKYLVNRNESLIAPLLVR 414 (734)
Q Consensus 359 -------~~--~-----g----~a~arN~-al~~a~~~~~DYlf~vDAD~~L--~np~tL~~LI~~nk~IVaP~l~~ 414 (734)
+. . | ..+.++. .++.-++.+-+|+++...|+.. -||..|..+++++.+..+-++.+
T Consensus 98 ~~l~~~~~~~~~~~~P~GhG~i~~aL~~sG~L~~l~~~G~~yi~v~nvDNL~a~~Dp~~lg~~~~~~~~~~~evv~K 174 (300)
T cd00897 98 LPVPSWADSPDEEWYPPGHGDIFESLYNSGLLDTLLAQGKEYLFVSNIDNLGATVDLRILNHMVDNKAEYIMEVTDK 174 (300)
T ss_pred ccccccCCCcceeeccCCCchHHHHHHHCCcHHHHHhcCCEEEEEEecccccccCCHHHHHHHHhcCCceEEEEeec
Confidence 00 0 0 1233333 3444455778999999999832 25999999999999998888854
No 300
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=22.78 E-value=4.3e+02 Score=27.35 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=51.0
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCC-----------CcHHHHH
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNST-----------VNSKEAR 367 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~-----------~g~a~ar 367 (734)
|-.+.+.-.+.||.+-+-. .++++|.. -++...+.+++..+..+ .+++++..+.. ...+...
T Consensus 11 ~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~y~ 85 (246)
T cd00505 11 EYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYN---FNYELIPVDILDSVDSEHLKRPIKIVTLT 85 (246)
T ss_pred chhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccC---ceEEEEeccccCcchhhhhcCccccceeH
Confidence 4566777778888764432 35544443 22334455555443322 24554443211 1112222
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHcC
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~n 404 (734)
...+..-.. ..|=++++|+|+++. +-|++|.+.+
T Consensus 86 RL~i~~llp-~~~kvlYLD~D~iv~--~di~~L~~~~ 119 (246)
T cd00505 86 KLHLPNLVP-DYDKILYVDADILVL--TDIDELWDTP 119 (246)
T ss_pred HHHHHHHhh-ccCeEEEEcCCeeec--cCHHHHhhcc
Confidence 222322233 689999999999885 5677777753
No 301
>PRK11204 N-glycosyltransferase; Provisional
Probab=22.47 E-value=4.8e+02 Score=29.14 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=59.5
Q ss_pred CCcEEEEEeecCCCchHHHHHHHHHHcCCcc-e--eeccCcc---------cCCC--C---CCCCCccchHHHHHHHHhh
Q psy14856 31 EDKFLVITVASNETDGYKRFIQSAEVNKLQV-K--TLGLHQP---------WLGG--D---MSSLGGGYKVNLLKNELDE 93 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~~r~~~Sa~~~~y~~-~--vlg~g~~---------W~gg--~---~~~~ggg~Ki~~l~~~L~~ 93 (734)
.+++-|+.|+-++.+.+.+.++|....+||. + |+.-|.. +... . -.....+-|...+...++.
T Consensus 53 ~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g~~~ 132 (420)
T PRK11204 53 YPGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALNTGAAA 132 (420)
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHHHHH
Confidence 4679999999999999999999999888863 3 3322211 0000 0 0001222377888888876
Q ss_pred cCCCCCeEEEEEeccceeEeCCHHHHHHHHhc
Q psy14856 94 MDITDDMIILVTDSYDVIIDGGVNDILERFNT 125 (734)
Q Consensus 94 ~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~ 125 (734)
.. .| +|++.|+-+++--.-.+++++.|.+
T Consensus 133 a~--~d-~i~~lDaD~~~~~d~L~~l~~~~~~ 161 (420)
T PRK11204 133 AR--SE-YLVCIDGDALLDPDAAAYMVEHFLH 161 (420)
T ss_pred cC--CC-EEEEECCCCCCChhHHHHHHHHHHh
Confidence 42 34 9999999665533334788888854
No 302
>PRK10073 putative glycosyl transferase; Provisional
Probab=22.42 E-value=9.9e+02 Score=26.04 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=32.2
Q ss_pred eEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCC
Q psy14856 100 MIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPD 141 (734)
Q Consensus 100 ~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~ 141 (734)
+.|+|+|+-|.+.-.-.+.+++...+.+..|+++.-..++.+
T Consensus 87 ~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~ 128 (328)
T PRK10073 87 KYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRD 128 (328)
T ss_pred CEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeC
Confidence 499999999987655567888888877888887765555544
No 303
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=22.15 E-value=4.5e+02 Score=26.13 Aligned_cols=40 Identities=25% Similarity=0.423 Sum_probs=27.3
Q ss_pred hHHHHHHHHhhcCCCCCeEEEEEeccceeEeCC-HHHHHHHHhcC
Q psy14856 83 KVNLLKNELDEMDITDDMIILVTDSYDVIIDGG-VNDILERFNTF 126 (734)
Q Consensus 83 Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~-~~~ll~rf~~~ 126 (734)
|...+...++.- +.| +|+|.|+ |+++... .+.+++.+.+.
T Consensus 65 ~~~a~n~g~~~a--~~d-~v~~lD~-D~~~~~~~l~~l~~~~~~~ 105 (235)
T cd06434 65 KRRALAEGIRHV--TTD-IVVLLDS-DTVWPPNALPEMLKPFEDP 105 (235)
T ss_pred hHHHHHHHHHHh--CCC-EEEEECC-CceeChhHHHHHHHhccCC
Confidence 566676677653 235 9999999 5555544 58888888743
No 304
>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane]
Probab=22.12 E-value=8.3e+02 Score=25.87 Aligned_cols=89 Identities=10% Similarity=0.125 Sum_probs=66.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
.+|.|..+|+++.+..+-.+ ++|..|.+.+...++++..++| +.+..+ ++....+.-+..+.+..+|-
T Consensus 27 ~~pmI~~~lervrks~~~d~---ivvATS~~~~d~~l~~~~~~~G-----~~vfrG----s~~dVL~Rf~~a~~a~~~~~ 94 (241)
T COG1861 27 GEPMIEYQLERVRKSKDLDK---IVVATSDKEEDDALEEVCRSHG-----FYVFRG----SEEDVLQRFIIAIKAYSADV 94 (241)
T ss_pred CCchHHHHHHHHhccccccc---eEEEecCCcchhHHHHHHHHcC-----eeEecC----CHHHHHHHHHHHHHhcCCCe
Confidence 46999999999999877332 5678899999999999998875 444433 34455555555555578899
Q ss_pred EEEECCCccCCChHHHHHHHH
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~ 402 (734)
++=+-+|+=+.+|+.+...+.
T Consensus 95 VVRvTGD~P~~dp~l~d~~v~ 115 (241)
T COG1861 95 VVRVTGDNPFLDPELVDAAVD 115 (241)
T ss_pred EEEeeCCCCCCCHHHHHHHHH
Confidence 999999998878988876654
No 305
>KOG3200|consensus
Probab=21.76 E-value=1.4e+02 Score=30.07 Aligned_cols=90 Identities=20% Similarity=0.347 Sum_probs=60.1
Q ss_pred ceecCCCCChHHHHHHHHHHHHhC--CCCCCCCCCcccCCCcccccccCeeeeccch----HHHHHHHHHHhhchhhhhh
Q psy14856 560 DVFWFPIVTEKFCHEFVQIMEAYG--QWSDGTNNDKRLETGYEAVPTRDIHMKQVGL----AGVWAEFLRKYVVPLQERE 633 (734)
Q Consensus 560 ~Vy~fpv~s~~fC~~Li~e~E~~g--~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~----~~~~~~~l~~~v~P~~~~~ 633 (734)
.+|.+...++|+=..+..-+|+-- +|..-+| .| ..++|=.++.-|| -..|++.+...|. ---+
T Consensus 14 ~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~N--RR-------LqNyGGvvh~~glipeelP~wLq~~v~kin--nlgl 82 (224)
T KOG3200|consen 14 MIYIPNFITEEEENLYLSHIENAPQPKWRVLAN--RR-------LQNYGGVVHKTGLIPEELPPWLQYYVDKIN--NLGL 82 (224)
T ss_pred EEEcCCccChHHHHHHHHHHhcCCCchhHHHHh--hh-------hhhcCCccccCCcCccccCHHHHHHHHHhh--cccc
Confidence 367777889999999998888753 4554444 23 3345545555555 2468776655554 2233
Q ss_pred hcCCCCCCCCCcceeEEEEcCCCCCCCCccccCCc
Q psy14856 634 FIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSST 668 (734)
Q Consensus 634 f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S~ 668 (734)
|+ .+ .++..|-.|.|++. .-||.|+-.
T Consensus 83 F~----s~--~NHVLVNeY~pgqG--ImPHtDGPa 109 (224)
T KOG3200|consen 83 FK----SP--ANHVLVNEYLPGQG--IMPHTDGPA 109 (224)
T ss_pred cC----CC--cceeEeecccCCCC--cCcCCCCCc
Confidence 44 23 78889999999996 999999754
No 306
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.
Probab=21.37 E-value=6.1e+02 Score=27.98 Aligned_cols=124 Identities=10% Similarity=0.206 Sum_probs=76.0
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCC-------ceEEEEEecCCCCcHHHHHHHHHHhcc---CcceEEEEeCCC
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPA-------KKISMFVYNNQEYHAPLFDDYIHNFKT---MFKNVKYIAHNS 359 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk-------~ri~l~I~ns~D~t~~il~~f~~~~~~---~y~~V~ii~~~~ 359 (734)
.|+-++-|...+..++++..+++|.++.--. ..|.++|-+|. .|.+.+++|.+++.. .-.+|.+.....
T Consensus 33 ~PK~l~pv~~~~~k~ll~~~~e~l~~l~~~~~~~~~~~~~ip~~imtS~-~t~~~t~~~~~~~~~fGl~~~~i~~f~Q~~ 111 (323)
T cd04193 33 GPKGMFPVGLPSKKSLFQLQAERILKLQELAGEASGKKVPIPWYIMTSE-ATHEETRKFFKENNYFGLDPEQVHFFQQGM 111 (323)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHHHHhhccCCCCCceEEEEcCh-hHhHHHHHHHHhCCcCCCCCceEEEEecCc
Confidence 4666666654566789999999999864111 23556665554 455667777776431 111333322110
Q ss_pred ----------------CC-----c----HHHHHHH-HHHhhhhcCccEEEEECCCcc---CCChHHHHHHHHcCCceeee
Q psy14856 360 ----------------TV-----N----SKEARNL-AVENSLHKGVDFYFYVDSDSH---LDNPDVLKYLVNRNESLIAP 410 (734)
Q Consensus 360 ----------------~~-----g----~a~arN~-al~~a~~~~~DYlf~vDAD~~---L~np~tL~~LI~~nk~IVaP 410 (734)
.. | ....++. .++.-++..-+|+++...|+. .-+|..|...++.+.++.+-
T Consensus 112 ~P~~~~~g~~~l~~~~~~~~~P~GhG~i~~aL~~sG~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~k 191 (323)
T cd04193 112 LPCVDFDGKILLEEKGKIAMAPNGNGGLYKALQTAGILEDMKKRGIKYIHVYSVDNILVKVADPVFIGFCISKGADVGAK 191 (323)
T ss_pred eeeEcCCCccccCCCCccccCCCCchHHHHHHHHCChHHHHHhCCCEEEEEEecCcccccccCHHHhHHHHHcCCceEEE
Confidence 00 1 1233333 455555578899999999995 34699999999998888877
Q ss_pred cccC
Q psy14856 411 LLVR 414 (734)
Q Consensus 411 ~l~~ 414 (734)
++.+
T Consensus 192 vv~k 195 (323)
T cd04193 192 VVRK 195 (323)
T ss_pred EEEC
Confidence 6643
No 307
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.85 E-value=3.1e+02 Score=24.97 Aligned_cols=76 Identities=16% Similarity=0.056 Sum_probs=43.1
Q ss_pred EEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCC--CCCCcc-chHHHHHHHHhhcCCCCCeEEEEEeccceeE
Q psy14856 36 VITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDM--SSLGGG-YKVNLLKNELDEMDITDDMIILVTDSYDVII 112 (734)
Q Consensus 36 vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~--~~~ggg-~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f 112 (734)
++.|++.+-.-+.-+.+--..+|+|.=.+=+ ..|.+... -..|.+ .|...|.+-++.+++ -++||+-||-
T Consensus 2 f~YvS~SPwnly~~l~~Fl~~~~~P~G~~~L-r~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~--~kfiLIGDsg---- 74 (100)
T PF09949_consen 2 FFYVSNSPWNLYPFLRDFLRRNGFPAGPLLL-RDYGPSLSGLFKSGAEEHKRDNIERILRDFPE--RKFILIGDSG---- 74 (100)
T ss_pred EEEEcCCHHHHHHHHHHHHHhcCCCCCceEc-ccCCccccccccCCchhHHHHHHHHHHHHCCC--CcEEEEeeCC----
Confidence 3445555522222222333456787764422 33422211 123444 899999999999864 5799999985
Q ss_pred eCCHHH
Q psy14856 113 DGGVND 118 (734)
Q Consensus 113 ~~~~~~ 118 (734)
|..||.
T Consensus 75 q~Dpei 80 (100)
T PF09949_consen 75 QHDPEI 80 (100)
T ss_pred CcCHHH
Confidence 455543
No 308
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=20.13 E-value=1.2e+02 Score=33.99 Aligned_cols=57 Identities=26% Similarity=0.416 Sum_probs=36.4
Q ss_pred EEeeccCCCCCCCCCccceecccCcchhhhhccchHHHhhhCCCCCCCCCCCceecCCCCChHHHHHHHHHHHHhC
Q psy14856 508 GHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYG 583 (734)
Q Consensus 508 G~l~~~~~~~~~~~h~~l~~~~~n~~dw~e~yihp~y~~~~~~~~~~~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g 583 (734)
|++.+...|+ ++|+| |+.. -.--.|.+.+. .||.-..+-+.||.||++.++.++..|
T Consensus 122 ~~~f~~~~yD------~VW~l---Pq~~---~~~~~yl~~l~-------r~Pv~~vP~iWsP~F~~~~~~~l~~~~ 178 (364)
T PF10933_consen 122 GHLFNGAPYD------EVWTL---PQFE---NTCAPYLETLH-------RCPVRVVPHIWSPRFLDQRIAQLPEHG 178 (364)
T ss_pred CccCCCCCCc------eeEec---cchh---hhchHHHHHHh-------cCCceeeCccCCchhHHHHHHhhhhcC
Confidence 6677776666 77776 1110 01112333333 577777777899999999999998544
No 309
>PF09864 MliC: Membrane-bound lysozyme-inhibitor of c-type lysozyme; InterPro: IPR018660 This entry contains proteins that represent a novel family of bacterial lysozyme inhibitors with widespread homologues in Gram-negative bacteria, that may function as colonization or virulence factors in bacteria interacting with an animal host []. ; PDB: 3OE3_F 2F09_A 3F6Z_D.
Probab=20.09 E-value=76 Score=26.61 Aligned_cols=46 Identities=30% Similarity=0.478 Sum_probs=37.5
Q ss_pred ceeEEEEcCCCCCCCCccccCCceEEEEEecCCCCcCCCccEEEee
Q psy14856 646 MSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 646 ~~fvvrY~~~~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
.-+.|+|..+.+.....-.++.++++....+..|.-|++|++.|+.
T Consensus 7 ~~i~v~~~~~~~~~a~l~~~~~~~~L~~~~SaSGarY~~~~~~~w~ 52 (72)
T PF09864_consen 7 QRISVTYINDDDPSAVLRYDDQEYTLPQAPSASGARYSNGGYEFWT 52 (72)
T ss_dssp CEEEEEEEECTTEEEEEECCTEEEEEEEECTSSSEEEECCTEEEEE
T ss_pred CEEEEEEcCCCCcEEEEEECCEEEEEEEeecCCCCcEeCCCEEEEE
Confidence 4578999887775466677788899999998888889999999974
No 310
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=20.02 E-value=7.4e+02 Score=25.13 Aligned_cols=94 Identities=18% Similarity=0.314 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|.+.++.+.+ --++|.+.+ +.|...+++++++. .|+++... ..|.-+=.+.|++.. +.=+
T Consensus 27 kpLI~~v~~al~~---~~d~i~v~i----sp~tp~t~~~~~~~-----gv~vi~tp-G~GYv~Dl~~al~~l----~~P~ 89 (177)
T COG2266 27 KPLIDRVLEALRK---IVDEIIVAI----SPHTPKTKEYLESV-----GVKVIETP-GEGYVEDLRFALESL----GTPI 89 (177)
T ss_pred ccHHHHHHHHHHh---hcCcEEEEe----CCCCHhHHHHHHhc-----CceEEEcC-CCChHHHHHHHHHhc----CCce
Confidence 5788888888887 234554444 33344455555543 27777643 445566666677553 4478
Q ss_pred EEECCCccCCChHHHHHHHHcCCceeeeccc
Q psy14856 383 FYVDSDSHLDNPDVLKYLVNRNESLIAPLLV 413 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~~nk~IVaP~l~ 413 (734)
+.+-||..+-||..|..+++.-..+.+|+.+
T Consensus 90 lvvsaDLp~l~~~~i~~vi~~~~~~~~p~~~ 120 (177)
T COG2266 90 LVVSADLPFLNPSIIDSVIDAAASVEVPIVT 120 (177)
T ss_pred EEEecccccCCHHHHHHHHHHHhhccCceeE
Confidence 9999999888999999999876677777664
Done!