Query psy14856
Match_columns 734
No_of_seqs 421 out of 755
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 22:30:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 99.7 1.2E-16 4.2E-21 161.3 19.7 211 289-515 3-230 (240)
2 1qg8_A Protein (spore coat pol 99.7 6E-16 2.1E-20 157.8 13.7 193 291-515 1-219 (255)
3 1xhb_A Polypeptide N-acetylgal 99.6 2.7E-15 9.1E-20 168.2 18.9 210 289-514 27-262 (472)
4 2d7i_A Polypeptide N-acetylgal 99.6 2E-15 7E-20 174.0 14.9 212 289-513 110-341 (570)
5 2z86_A Chondroitin synthase; G 99.6 5.5E-13 1.9E-17 154.5 31.8 195 289-514 373-576 (625)
6 3dkq_A PKHD-type hydroxylase S 99.6 3.1E-15 1.1E-19 154.5 8.6 158 558-732 19-193 (243)
7 4fix_A UDP-galactofuranosyl tr 99.6 1.9E-14 6.4E-19 168.6 15.4 207 289-510 178-417 (657)
8 2ffu_A Ppgalnact-2, polypeptid 99.5 6.2E-14 2.1E-18 158.6 18.0 210 289-512 64-292 (501)
9 3itq_A Prolyl 4-hydroxylase, a 99.5 1.3E-14 4.4E-19 147.5 11.1 153 557-732 37-210 (216)
10 4hg6_A Cellulose synthase subu 99.5 3.1E-13 1.1E-17 161.7 16.6 200 288-507 137-365 (802)
11 2z86_A Chondroitin synthase; G 99.4 3.2E-12 1.1E-16 148.1 19.8 212 288-515 90-335 (625)
12 2jig_A Prolyl-4 hydroxylase; h 99.4 1.9E-13 6.5E-18 139.4 8.4 156 561-732 23-215 (224)
13 3l7i_A Teichoic acid biosynthe 99.4 7.1E-14 2.4E-18 165.4 0.0 204 290-514 1-210 (729)
14 3ckj_A Putative uncharacterize 99.4 2.9E-12 9.8E-17 137.5 12.5 190 289-497 46-250 (329)
15 3f1y_A Mannosyl-3-phosphoglyce 99.2 1.2E-11 4.1E-16 136.2 10.5 192 289-498 92-296 (387)
16 2fy7_A Beta-1,4-galactosyltran 99.1 2.7E-10 9.3E-15 120.5 10.0 151 290-503 64-221 (287)
17 2nxv_A ATP synthase subunits r 99.0 9.2E-10 3.1E-14 113.3 11.3 166 289-504 14-198 (249)
18 2hbt_A EGL nine homolog 1; pro 98.7 1.3E-07 4.5E-12 97.8 14.2 168 559-732 27-211 (247)
19 2bo4_A Mannosylglycerate synth 98.6 4.4E-07 1.5E-11 100.1 14.8 188 295-500 4-207 (397)
20 2wvl_A Mannosyl-3-phosphoglyce 98.6 2E-07 6.9E-12 100.0 10.7 103 290-401 52-181 (391)
21 2c0n_A A197; thermophil protei 98.4 3.6E-06 1.2E-10 83.2 13.4 158 323-509 3-182 (203)
22 2zu9_A Mannosyl-3-phosphoglyce 97.7 0.00037 1.3E-08 76.3 14.4 102 291-402 51-182 (394)
23 2rg4_A Uncharacterized protein 97.0 0.0027 9.1E-08 64.1 10.8 83 643-732 101-205 (216)
24 1fo8_A Alpha-1,3-mannosyl-glyc 97.0 0.00045 1.5E-08 74.6 5.2 110 291-409 2-135 (343)
25 3kt7_A PKHD-type hydroxylase T 96.9 0.0032 1.1E-07 71.8 11.1 170 554-732 30-226 (633)
26 3lw6_A FI08434P, beta-4-galact 96.4 0.0095 3.2E-07 62.2 9.7 149 291-501 51-203 (287)
27 2a1x_A Phytanoyl-COA dioxygena 96.0 0.051 1.7E-06 57.0 12.7 162 561-731 37-251 (308)
28 2rdq_A 1-deoxypentalenic acid 95.2 0.19 6.4E-06 51.9 13.4 155 561-732 34-250 (288)
29 2opw_A Phyhd1 protein; double- 94.5 0.14 4.9E-06 53.0 10.1 73 653-729 146-261 (291)
30 2fct_A Syringomycin biosynthes 94.2 0.3 1E-05 51.1 12.1 30 699-730 224-256 (313)
31 3nnf_A CURA; non-HAEM Fe(II)/a 94.2 0.17 5.9E-06 53.1 9.7 121 561-689 43-174 (344)
32 3emr_A ECTD; double stranded b 93.9 0.13 4.4E-06 54.5 8.4 155 561-729 49-263 (310)
33 3gja_A CYTC3; halogenase, beta 93.8 0.15 5.2E-06 54.1 8.9 152 561-729 26-257 (319)
34 3tzt_A Glycosyl transferase fa 93.5 0.31 1.1E-05 50.6 10.5 156 33-195 35-203 (276)
35 1g9r_A Glycosyl transferase; a 89.6 0.69 2.4E-05 48.6 8.0 90 101-195 98-198 (311)
36 3s57_A Alpha-ketoglutarate-dep 88.9 1.5 5.1E-05 43.5 9.4 150 560-729 12-198 (204)
37 2iuw_A Alkylated repair protei 76.8 12 0.0004 37.9 10.2 146 561-729 43-225 (238)
38 3st8_A Bifunctional protein GL 74.5 8.5 0.00029 42.8 9.3 104 291-403 31-135 (501)
39 3i3q_A Alpha-ketoglutarate-dep 73.0 6.8 0.00023 39.0 7.1 155 555-729 3-198 (211)
40 2wee_A MOBA-related protein; u 72.3 13 0.00044 35.1 8.9 90 302-403 30-120 (197)
41 1vgw_A 4-diphosphocytidyl-2C-m 72.0 21 0.00071 34.7 10.5 93 301-403 32-128 (231)
42 2waw_A MOBA relate protein; un 71.9 14 0.0005 34.7 9.1 90 302-403 30-120 (199)
43 3ngw_A Molybdopterin-guanine d 66.3 36 0.0012 33.2 10.8 91 301-411 24-119 (208)
44 4fce_A Bifunctional protein GL 66.0 15 0.00052 39.7 8.8 88 302-403 35-123 (459)
45 2v0h_A Bifunctional protein GL 65.2 19 0.00066 38.9 9.4 89 303-404 33-121 (456)
46 2d0j_A Galactosylgalactosylxyl 64.6 51 0.0017 33.6 11.6 84 290-376 2-92 (246)
47 3ioh_A Histo-blood group ABO s 64.4 12 0.0004 39.2 6.9 98 290-393 57-162 (298)
48 3f1c_A Putative 2-C-methyl-D-e 64.1 45 0.0015 33.1 11.2 103 291-403 23-129 (246)
49 1vic_A 3-deoxy-manno-octuloson 61.1 53 0.0018 32.7 11.2 87 302-403 26-115 (262)
50 3rcq_A Aspartyl/asparaginyl be 60.7 12 0.0004 37.0 5.9 75 646-730 103-179 (197)
51 1hm9_A GLMU, UDP-N-acetylgluco 60.1 21 0.00072 38.9 8.5 87 303-402 39-125 (468)
52 3cu0_A Galactosylgalactosylxyl 58.6 75 0.0026 32.9 11.7 85 288-375 18-115 (281)
53 3pl0_A Uncharacterized protein 58.4 8.8 0.0003 39.4 4.7 70 660-732 163-245 (254)
54 1v84_A Galactosylgalactosylxyl 56.3 89 0.003 31.9 11.7 98 290-391 2-119 (253)
55 1gp6_A Leucoanthocyanidin diox 56.3 17 0.00059 38.8 6.8 82 646-734 211-307 (356)
56 2y6p_A 3-deoxy-manno-octuloson 55.7 58 0.002 31.5 10.2 81 302-402 26-109 (234)
57 1o7q_A N-acetyllactosaminide a 55.2 24 0.00083 36.7 7.3 97 291-393 48-153 (289)
58 1ezi_A CMP-N-acetylneuraminic 55.1 74 0.0025 30.7 10.8 89 302-403 28-121 (228)
59 3d5n_A Q97W15_sulso; NESG, SSR 55.0 30 0.001 33.0 7.8 92 302-411 27-122 (197)
60 2vsh_A TARI, 2-C-methyl-D-eryt 54.3 67 0.0023 30.9 10.3 95 302-403 30-130 (236)
61 2qh5_A PMI, ALGA, mannose-6-ph 53.7 69 0.0023 32.9 10.8 92 302-403 36-128 (308)
62 3k8d_A 3-deoxy-manno-octuloson 53.3 83 0.0028 31.9 11.2 87 303-403 43-131 (264)
63 3on7_A Oxidoreductase, iron/as 53.2 16 0.00053 37.8 5.7 83 645-734 150-254 (280)
64 2e8b_A Probable molybdopterin- 53.0 75 0.0026 30.3 10.3 86 303-410 40-127 (201)
65 3oam_A 3-deoxy-manno-octuloson 51.8 83 0.0028 31.2 10.8 87 302-402 26-114 (252)
66 1w9y_A 1-aminocyclopropane-1-c 51.5 20 0.00068 37.7 6.3 84 645-734 155-253 (319)
67 1h7e_A 3-deoxy-manno-octuloson 50.4 85 0.0029 30.5 10.5 85 302-402 26-112 (245)
68 4ayl_A BOGT-metal-independent 49.6 24 0.00082 35.9 6.1 94 292-394 2-103 (246)
69 3oox_A Putative 2OG-Fe(II) oxy 49.5 14 0.00047 38.7 4.7 83 645-734 169-271 (312)
70 3tqd_A 3-deoxy-manno-octuloson 49.3 1.1E+02 0.0036 30.9 11.2 86 303-402 34-121 (256)
71 4fcu_A 3-deoxy-manno-octuloson 49.2 87 0.003 31.5 10.5 89 302-402 25-114 (253)
72 3juk_A UDP-glucose pyrophospho 49.1 37 0.0013 34.2 7.7 90 303-402 33-147 (281)
73 1e5k_A Molybdopterin-guanine d 49.1 74 0.0025 30.5 9.6 89 302-410 32-125 (201)
74 1dcs_A Deacetoxycephalosporin 47.7 15 0.00053 38.4 4.6 85 645-734 157-267 (311)
75 2lnd_A De novo designed protei 47.0 19 0.00065 30.3 4.1 74 37-125 5-97 (112)
76 1odm_A Isopenicillin N synthas 44.1 40 0.0014 35.4 7.2 81 646-734 181-288 (331)
77 3q80_A 2-C-methyl-D-erythritol 43.7 94 0.0032 30.7 9.6 168 301-502 33-207 (231)
78 1qwj_A Cytidine monophospho-N- 42.6 1.4E+02 0.0048 28.9 10.6 87 302-402 27-118 (229)
79 2i5k_A UTP--glucose-1-phosphat 42.2 96 0.0033 34.6 10.2 109 299-409 117-258 (488)
80 3tht_A Alkylated DNA repair pr 40.3 16 0.00053 39.2 3.3 70 643-721 196-274 (345)
81 3rsb_A Adenosylcobinamide-phos 37.7 40 0.0014 31.8 5.5 91 302-403 26-116 (196)
82 4ecm_A Glucose-1-phosphate thy 37.3 67 0.0023 32.2 7.4 91 302-402 54-144 (269)
83 5nul_A Flavodoxin; electron tr 35.7 1.7E+02 0.0057 25.7 9.1 84 289-374 45-136 (138)
84 3pnn_A Conserved domain protei 35.5 1E+02 0.0034 31.7 8.5 92 302-403 32-138 (303)
85 2icy_A Probable UTP-glucose-1- 35.0 1.7E+02 0.0059 32.3 10.8 112 299-412 104-248 (469)
86 3u2u_A Glycogenin-1, GN-1, GN1 34.7 24 0.00083 36.1 3.6 73 101-195 98-174 (263)
87 1oih_A Putative alkylsulfatase 33.5 1.4E+02 0.0047 30.5 9.2 42 646-691 92-139 (301)
88 3bcv_A Putative glycosyltransf 33.4 1.1E+02 0.0038 29.0 8.1 55 85-142 74-128 (240)
89 2gak_A Beta-1,6-N-acetylglucos 32.3 3.7E+02 0.013 28.8 12.7 106 290-402 83-197 (391)
90 2e3d_A UTP--glucose-1-phosphat 31.6 1.3E+02 0.0044 30.5 8.6 91 303-402 39-157 (302)
91 2xme_A CTP-inositol-1-phosphat 30.7 69 0.0023 31.1 6.0 88 302-404 44-132 (232)
92 4hg6_A Cellulose synthase subu 30.5 2.7E+02 0.0091 32.8 12.1 102 31-135 139-276 (802)
93 2xwl_A 2-C-methyl-D-erythritol 30.2 1.9E+02 0.0064 27.4 9.1 89 302-403 29-117 (223)
94 2c0n_A A197; thermophil protei 29.7 2E+02 0.0069 28.3 8.9 86 33-134 2-88 (203)
95 1i52_A 4-diphosphocytidyl-2-C- 28.8 99 0.0034 30.0 6.8 90 302-403 34-123 (236)
96 1otj_A Alpha-ketoglutarate-dep 28.7 2E+02 0.0067 28.9 9.3 97 566-691 26-130 (283)
97 2p6w_A VP54, putative glycosyl 28.0 2E+02 0.0068 28.3 8.4 123 30-173 4-137 (213)
98 3f6r_A Flavodoxin; FMN binding 27.9 2.7E+02 0.0094 24.5 9.3 84 289-373 49-144 (148)
99 3brk_X Glucose-1-phosphate ade 27.8 1E+02 0.0034 33.0 7.2 95 300-402 41-147 (420)
100 2ux8_A Glucose-1-phosphate uri 26.9 1E+02 0.0035 31.2 6.8 92 303-403 45-157 (297)
101 3ewb_X 2-isopropylmalate synth 26.8 3.9E+02 0.013 27.4 11.2 109 291-403 67-187 (293)
102 2dpw_A Hypothetical protein TT 26.1 1.7E+02 0.006 28.3 8.1 87 302-412 31-119 (232)
103 1yp2_A Glucose-1-phosphate ade 24.2 2.2E+02 0.0077 30.4 9.3 97 298-402 47-157 (451)
104 2p6w_A VP54, putative glycosyl 24.0 37 0.0013 33.4 2.4 19 377-395 71-89 (213)
105 2yc3_A 2-C-methyl-D-erythritol 23.7 3E+02 0.01 26.1 9.2 91 302-403 31-122 (228)
106 1nx8_A CARC, carbapenem syntha 22.5 63 0.0021 32.5 4.1 33 658-691 96-134 (273)
107 2ggo_A 401AA long hypothetical 22.2 48 0.0017 35.1 3.3 84 302-403 30-114 (401)
108 2pa4_A UTP-glucose-1-phosphate 22.1 1E+02 0.0035 31.8 5.8 50 351-402 106-156 (323)
109 2khf_A PLNJ; anti-microbial, b 22.0 6.8 0.00023 25.1 -2.0 15 418-433 2-16 (26)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.73 E-value=1.2e-16 Score=161.25 Aligned_cols=211 Identities=12% Similarity=0.141 Sum_probs=135.5
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR 367 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar 367 (734)
..|+|+|+||+||++.+|+++|+||.+|+||+.+|. +|+| |+|.|.++++++.++. +.|+++. .++.|.+.||
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiI-vvDd~S~d~t~~~~~~~~~~~----~~i~~i~-~~n~G~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEII-LIDDESPDNCPKICDDYAAQY----PNIKVIH-KKNAGLGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEE-EEECCCSSSHHHHHHHHHHHC----SSEEEEE-CCCCCHHHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEE-EEECCCCcCHHHHHHHHHhhC----CCEEEEE-CCCCChHHHH
Confidence 469999999999999999999999999999986663 3444 9999999999988764 5788887 5699999999
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecc---cCCCcccccccccccCCccccchHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL---VRPFKAWSNFWGALNADGFYARSFDYMN 440 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l---~~~~~~wsNFWgal~~~GyY~Rsedy~~ 440 (734)
|.|++.| ++||++|+|+|.++. |+.|+.|++. +..++..-. ...+.....+........+|.+ .....
T Consensus 77 N~g~~~a---~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 151 (240)
T 3bcv_A 77 NSGLDVA---TGEYVAFCDSDDYVD-SDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK-NEIHT 151 (240)
T ss_dssp HHHHHHC---CSSEEEECCTTCCCC-TTHHHHHHHHHHHHTCSEEEC--------------------CEEECSH-HHHHH
T ss_pred HHHHHHc---CCCEEEEECCCCcCC-HHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCH-HHHHH
Confidence 9999986 689999999999997 9999999862 445553311 1111100000000001122222 22222
Q ss_pred HHhcccCCcce-------eeeceeeeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEEee
Q psy14856 441 IINGDQGGKGI-------WNVPYITNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLV 511 (734)
Q Consensus 441 i~~~~~~~~G~-------~nVP~v~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~ 511 (734)
.... . .+. ...+...++.+++++++++ .+ ..|... ...||..||.++..+|..+.+.+...|-|-.
T Consensus 152 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~rr~~~~~-~g-~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr~ 226 (240)
T 3bcv_A 152 LLKD-L--IASDPYAREERAIQVSAKVVLYRRNLIEK-KH-LRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYNYRT 226 (240)
T ss_dssp HHGG-G--TSSCHHHHHHHHHHHTCSCEEEEHHHHHH-TT-CCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--------
T ss_pred HHHH-H--hhcchhhccccccccchhheeeeHHHHHH-cC-CccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEEEEe
Confidence 2211 1 110 0011224578999999997 32 135533 3579999999999999999999988887776
Q ss_pred ccCC
Q psy14856 512 DSEN 515 (734)
Q Consensus 512 ~~~~ 515 (734)
...+
T Consensus 227 ~~~~ 230 (240)
T 3bcv_A 227 NPIS 230 (240)
T ss_dssp ----
T ss_pred CCCC
Confidence 6655
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.65 E-value=6e-16 Score=157.79 Aligned_cols=193 Identities=10% Similarity=0.071 Sum_probs=135.4
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCC--------CCC
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHN--------STV 361 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~--------~~~ 361 (734)
|+|+|+||+||++.+|.++|+||.+|+||..+|.| |++ |+|.|.++++++.+ .+.|+++..+ ++.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiiv-vDd~S~d~t~~~~~~~~~-----~~~i~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLNVIRPFLN-----DNRVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHHHHGGGGG-----STTEEEEECCCCSHHHHHSSC
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEE-EECCCCchHHHHHHHHhh-----cCCEEEEeccccccccccccc
Confidence 78999999999999999999999999999766633 444 89999988887653 4579999888 899
Q ss_pred cHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc-----CCceeeeccc-----CCCcccccccccccCCcc
Q psy14856 362 NSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR-----NESLIAPLLV-----RPFKAWSNFWGALNADGF 431 (734)
Q Consensus 362 g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~-----nk~IVaP~l~-----~~~~~wsNFWgal~~~Gy 431 (734)
|.+.|+|.|++.| ++||++|+|+|.++. |+.|+.|++. +..++.+-.. ..+.. .+....+.+.
T Consensus 75 G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~ 147 (255)
T 1qg8_A 75 RYAALINQAIEMA---EGEYITYATDDNIYM-PDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDI---VKETVRPAAQ 147 (255)
T ss_dssp HHHHHHHHHHHHC---CCSEEEEEETTEEEC-TTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CE---EEEEEECCCS
T ss_pred CHHHHHHHHHHHc---CCCEEEEeCCCCccC-hHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcc---hhhccCchHH
Confidence 9999999999886 799999999999997 9999999862 3455554321 11111 1111111010
Q ss_pred ccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhccccccc------c-cCCCchhHHHHHHHHHcCeeEEEecc
Q psy14856 432 YARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIY------T-LNSMDYDMAFCTNLRNKGIHLKIDST 504 (734)
Q Consensus 432 Y~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f------~-~~~~deDm~Fc~~ar~~Gi~myv~N~ 504 (734)
. ......+..+++.+++++++++ .+ ..| . .....||..||.++.++|- +.+.+.
T Consensus 148 ~----------------~~~~~~~~~~~~~~~rr~~~~~-~g-~~f~~~~~~~~~~~~~eD~~~~~r~~~~g~-~~~~~~ 208 (255)
T 1qg8_A 148 V----------------TWNAPCAIDHCSVMHRYSVLEK-VK-EKFGSYWDESPAFYRIGDARFFWRVNHFYP-FYPLDE 208 (255)
T ss_dssp C----------------BSCCTTTSCGGGEEEETHHHHH-HH-HHHSSSSCCCGGGSTTHHHHHHHHHTTTCC-BEEEEE
T ss_pred H----------------HHhhcCCCccceEEEEHHHHHh-hc-ccccccccCCcccchHHHHHHHHHHHHhCC-EEEecC
Confidence 0 0011112345678999999997 32 123 1 2346899999999999995 666666
Q ss_pred cceEEeeccCC
Q psy14856 505 QEYGHLVDSEN 515 (734)
Q Consensus 505 ~~~G~l~~~~~ 515 (734)
..+-|-..+.+
T Consensus 209 ~~~~~r~~~~s 219 (255)
T 1qg8_A 209 ELDLNYITDQS 219 (255)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEEcCCc
Confidence 67777766655
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.64 E-value=2.7e-15 Score=168.22 Aligned_cols=210 Identities=13% Similarity=0.203 Sum_probs=149.0
Q ss_pred CCCcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEEE-Eec-CCC-CcHHHHHHHHHHhccCcc-eEEEEeCCCCCcH
Q psy14856 289 QFPSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISMF-VYN-NQE-YHAPLFDDYIHNFKTMFK-NVKYIAHNSTVNS 363 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l~-I~n-s~D-~t~~il~~f~~~~~~~y~-~V~ii~~~~~~g~ 363 (734)
+.|+|+|+||+||++ ..|.++|+||.+++||....+|+ |+| |+| .|.++++++.++ ++ .|+++..++|.|.
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~----~~~~v~vi~~~~n~G~ 102 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK----LKVPVHVIRMEQRSGL 102 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHS----SSSCEEEEECSSCCCH
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHH----CCCcEEEEECCCCCCh
Confidence 579999999999999 99999999999999998655543 444 888 599999988764 45 6999999999999
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccC--CCccccccccc--ccCCcc----
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVR--PFKAWSNFWGA--LNADGF---- 431 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~--~~~~wsNFWga--l~~~Gy---- 431 (734)
+.|+|.|++.| .+||++|+|+|+.++ |+.|+.|++. ...+++|.+.. .+.+ .+..+ ....++
T Consensus 103 ~~a~N~g~~~A---~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 176 (472)
T 1xhb_A 103 IRARLKGAAVS---RGQVITFLDAHCECT-AGWLEPLLARIKHDRRTVVCPIIDVISDDTF--EYMAGSDMTYGGFNWKL 176 (472)
T ss_dssp HHHHHHHHHHC---CSSEEEEEESSEEEC-TTCHHHHHHHHHHCTTEEEEEEEEEECSSSC--CEECCCTTEEEEECTTC
T ss_pred HHHHHHHHHhc---cCCeEEEECCCeEeC-ccHHHHHHHHHHhCCCEEEEeeeeeEcCCCc--eeccCCCcccceeeccc
Confidence 99999999886 599999999999997 9999999962 34566665421 1110 00000 000011
Q ss_pred -ccc----hHHHHHHHhcccCCcceeeeceeee-EEeeehhhHhhcccccccccCC--C-chhHHHHHHHHHcCeeEEEe
Q psy14856 432 -YAR----SFDYMNIINGDQGGKGIWNVPYITN-CYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLRNKGIHLKID 502 (734)
Q Consensus 432 -Y~R----sedy~~i~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar~~Gi~myv~ 502 (734)
+.+ .+.+. ...... .....+|.+.+ +++|+++++++ .+ .|+... + .||..||.+++++|..+.+.
T Consensus 177 ~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~g~~~~irr~~~~~-iG--gfde~~~~~g~ED~dl~~R~~~~G~~i~~~ 250 (472)
T 1xhb_A 177 NFRWYPVPQREMD-RRKGDR--TLPVRTPTMAGGLFSIDRDYFQE-IG--TYDAGMDIWGGENLEISFRIWQCGGTLEIV 250 (472)
T ss_dssp CEEEEECCHHHHH-HTTTCT--TSCEECSBCCSSSEEEEHHHHHH-TT--SCCTTSCTTCCCCSHHHHHHHHTTCEEEEE
T ss_pred eeecccCCHHHHh-cccCCC--CCcccCccccceeEEEEHHHHHH-cC--CCCCcccccCchhHHHHHHHHhcCCeEEEc
Confidence 000 11111 111111 23456776654 67899999998 43 354322 2 69999999999999999999
Q ss_pred cccceEEeeccC
Q psy14856 503 STQEYGHLVDSE 514 (734)
Q Consensus 503 N~~~~G~l~~~~ 514 (734)
+....+|+-..+
T Consensus 251 p~~~v~H~~~~~ 262 (472)
T 1xhb_A 251 TCSHVGHVFRKA 262 (472)
T ss_dssp EEEEEEEEC---
T ss_pred cCcEEEEEccCc
Confidence 999999986554
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.62 E-value=2e-15 Score=173.97 Aligned_cols=212 Identities=14% Similarity=0.183 Sum_probs=149.1
Q ss_pred CCCcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEE-EEec-CCCCc-HHHHHHHHHHhccCcceEEEEeCCCCCcHH
Q psy14856 289 QFPSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISM-FVYN-NQEYH-APLFDDYIHNFKTMFKNVKYIAHNSTVNSK 364 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t-~~il~~f~~~~~~~y~~V~ii~~~~~~g~a 364 (734)
..|+|+|+||+||++ ..|.++|+||+++.||....+| +|+| |+|.| .++++++.++ ++.|+++..+++.|.+
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~----~~~v~vi~~~~n~G~~ 185 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMAL----FPSVRILRTKKREGLI 185 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTT----STTEEEEECSSCCCHH
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHh----CCeEEEEECCCCCCHH
Confidence 479999999999998 9999999999999999874443 3444 89999 8999888764 3689999999999999
Q ss_pred HHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccC--CCccc-cc-----ccccccCCccc
Q psy14856 365 EARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVR--PFKAW-SN-----FWGALNADGFY 432 (734)
Q Consensus 365 ~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~--~~~~w-sN-----FWgal~~~GyY 432 (734)
.|+|.|++.| ++||++|+|+|+.++ |+.|+.|++. ...+++|.+.. ...+. .. +.+...-..+|
T Consensus 186 ~A~N~G~~~A---~gd~i~fLD~D~~~~-p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (570)
T 2d7i_A 186 RTRMLGASVA---TGDVITFLDSHCEAN-VNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYY 261 (570)
T ss_dssp HHHHHHHHHC---CSSEEEECCSSEEEC-TTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCE
T ss_pred HHHHHHHHhc---CCCEEEEEcCCcccc-ccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccc
Confidence 9999999886 699999999999996 9999999862 34566675521 11100 00 00000000111
Q ss_pred cchHHHHHHHhcccCCcceeeecee-eeEEeeehhhHhhcccccccccCC--C-chhHHHHHHHHHcCeeEEEecccceE
Q psy14856 433 ARSFDYMNIINGDQGGKGIWNVPYI-TNCYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLRNKGIHLKIDSTQEYG 508 (734)
Q Consensus 433 ~Rsedy~~i~~~~~~~~G~~nVP~v-~~~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar~~Gi~myv~N~~~~G 508 (734)
.+....-..-.... ...+.+|.+ +++++|+++++++ .+ .|+... + .||+.||.+++++|..+.+.+....+
T Consensus 262 ~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~irr~~~~~-iG--gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~ 336 (570)
T 2d7i_A 262 KRIPIPPELQKADP--SDPFESPVMAGGLFAVDRKWFWE-LG--GYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVG 336 (570)
T ss_dssp EEECCCTTTCCSST--TSCEECSSCCSSSEEEEHHHHHH-TT--SSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred cccccchhhhccCC--CcceecccccceEEEEEHHHHHh-cC--CCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEE
Confidence 11000000000001 233566766 5688899999998 43 354322 1 69999999999999999999999999
Q ss_pred Eeecc
Q psy14856 509 HLVDS 513 (734)
Q Consensus 509 ~l~~~ 513 (734)
|+...
T Consensus 337 H~~r~ 341 (570)
T 2d7i_A 337 HIYRK 341 (570)
T ss_dssp ECCCS
T ss_pred EEccc
Confidence 98543
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.59 E-value=5.5e-13 Score=154.47 Aligned_cols=195 Identities=14% Similarity=0.162 Sum_probs=135.6
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
..|+|+|+||+||++.+|.++|+||.+|+||..+|.|..++|+|.|.++++++.++ ++.|+++. +++.|.+.|+|
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~----~~~i~~~~-~~n~G~~~a~n 447 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYAN----HPRVRFIS-QKNKGIGSASN 447 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTT----CTTEEEEE-ECCCCHHHHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhh----CCcEEEEe-CCCCCHHHHHH
Confidence 46899999999999999999999999999998766443334999999999987654 45788886 67899999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHH---cCC--ceeeecc---cCCCcccccccccccCCccccchHHHHH
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN---RNE--SLIAPLL---VRPFKAWSNFWGALNADGFYARSFDYMN 440 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~---~nk--~IVaP~l---~~~~~~wsNFWgal~~~GyY~Rsedy~~ 440 (734)
.|++.| ++||++++|+|.++. |+.|+.|++ .+. .++.+-. ...+..... ++....... .
T Consensus 448 ~g~~~a---~g~~i~~ld~D~~~~-~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~-~ 514 (625)
T 2z86_A 448 TAVRLC---RGFYIGQLDSDDFLE-PDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISN--------GYNWPIYSR-E 514 (625)
T ss_dssp HHHHHC---CSSEEEECCTTCEEC-TTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEE--------CCCCSSCCH-H
T ss_pred HHHHhc---CCCEEEEECCCcccC-hhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEecc--------CcccccCCH-H
Confidence 999886 689999999999997 999999985 233 3443321 111111110 111110000 0
Q ss_pred HHhcccCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEecccceEEeeccC
Q psy14856 441 IINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSE 514 (734)
Q Consensus 441 i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~ 514 (734)
.+. . ..+.+++.+++++++.+ .+ .|+.. ...+|..||.+++++| .++..+...+-|.+...
T Consensus 515 ~~~-----~----~~~~~~~~~~~r~~~~~-~g--gfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~ 576 (625)
T 2z86_A 515 KLT-----S----AMICHHFRMFTARAWNL-TE--GFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGE 576 (625)
T ss_dssp HHT-----T----SCCCCSCEEEEHHHHTT-TT--CCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC--
T ss_pred HHh-----h----cccCCceEEEEHHHHHH-hC--CCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCC
Confidence 011 1 12345677999999987 43 24432 3679999999999999 66666666666555443
No 6
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.56 E-value=3.1e-15 Score=154.46 Aligned_cols=158 Identities=16% Similarity=0.227 Sum_probs=107.7
Q ss_pred CCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCc--ccccccC-eeeeccchHHHHHHHHHHhhchhhhhh-
Q psy14856 558 CPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGY--EAVPTRD-IHMKQVGLAGVWAEFLRKYVVPLQERE- 633 (734)
Q Consensus 558 ~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~--~~vpt~d-i~~~~~g~~~~~~~~l~~~v~P~~~~~- 633 (734)
...+....+||+++|++||+.+|.- .|..+..+ +|. ..+.+.+ +. .+- .....+.++|...+..-
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t-----~g~~~~~vr~n~~l~-~d~----~~~~~l~~~i~~~l~~~~ 87 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQT-----SGAMATTRKRNQQLD-KDD----PVAVALGQQIMDRLLAHP 87 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCC-----SSBSSCCCEEEEECC-TTC----HHHHHHHHHHHHHHHTCH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC-CCccCccc-----CCCccccceeeeEEC-CCC----HHHHHHHHHHHHHHccCc
Confidence 4556677899999999999999863 45543321 111 1233222 22 111 12223344444433322
Q ss_pred -hcCCCCCCCCCcceeEEEEcCCCCCCCCccccCC-----------ceEEEEEecCCCCcCCCccEEEeecc-ceeeccc
Q psy14856 634 -FIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSS-----------TYTINIALNQVGVDYEGGGCRFIRYN-CNVTATR 700 (734)
Q Consensus 634 -f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S-----------~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~ 700 (734)
|..... +.+.+...+.||.+|+ ++++|+|.+ .+|+.++||++. +|+||+|.|.... ...++|+
T Consensus 88 ~f~~~~L-~~~~e~~~~~rY~~G~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~-~~~GGetvf~~~~~~~~V~P~ 163 (243)
T 3dkq_A 88 QFVSAAL-PLQFYPPLFNRYQGGE--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPE-NYQGGELVIQDTYGQQSIKLS 163 (243)
T ss_dssp HHHHHHC-EEEEEEEEEEEECTTC--EEEEECBCSEEEETTEEEECCEEEEEECSCGG-GEEECCEEEEETTEEEEECCC
T ss_pred chhhccc-ccccccceEEEECCCC--eeccCCCCCCCCCCCccccceEEEEEEeCCCC-CCCCceEEEeeCCCcEEEecC
Confidence 211100 1245568999999985 599999953 589999999975 8999999998642 3446699
Q ss_pred ceeEEEeCCCcccccCcccCCceeEEEEEeee
Q psy14856 701 MGWMLMHPGRLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 701 ~G~al~h~g~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
+|.+|+|++.. +|+|.|||+|+||+++.|+
T Consensus 164 ~G~~v~F~s~~--lH~v~pV~~G~R~~~~~Wi 193 (243)
T 3dkq_A 164 AGSLVLYPSSS--LHQVTPVLSGERTAAFMWL 193 (243)
T ss_dssp TTCEEEEETTS--EEEECCEEEECEEEEEEEE
T ss_pred CCEEEEECCCC--eEcCccccccCEEEEEEeh
Confidence 99999999984 8999999999999999997
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.56 E-value=1.9e-14 Score=168.55 Aligned_cols=207 Identities=11% Similarity=0.096 Sum_probs=140.0
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceE-E-EEEec-CCCCc-HHHHHHHHHHhccCcceEEEEeCCCCCcHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKI-S-MFVYN-NQEYH-APLFDDYIHNFKTMFKNVKYIAHNSTVNSK 364 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri-~-l~I~n-s~D~t-~~il~~f~~~~~~~y~~V~ii~~~~~~g~a 364 (734)
..|+|+|+||+||++..|.+||++|.++.|+.+.. + |+|+| |+|.+ .+.+.+++++. ++.|+++..+ |.|.+
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~---~~~I~vI~~~-N~G~a 253 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL---GSRLSIHDQP-NLGGS 253 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH---GGGEEEEECC-CCHHH
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc---CCCEEEEECC-CCCHH
Confidence 46899999999999999999999999999943323 3 34555 77643 23333444333 3589999887 99999
Q ss_pred HHHHHHHHhhhhc-CccEEEEECCCccCCChHHHHHHHHc-----CCceeeecc-cC--CCcccc--cc-------cccc
Q psy14856 365 EARNLAVENSLHK-GVDFYFYVDSDSHLDNPDVLKYLVNR-----NESLIAPLL-VR--PFKAWS--NF-------WGAL 426 (734)
Q Consensus 365 ~arN~al~~a~~~-~~DYlf~vDAD~~L~np~tL~~LI~~-----nk~IVaP~l-~~--~~~~ws--NF-------Wgal 426 (734)
.|+|.|++.|+.. ++||++|+|+|+++. |+.|+.|++. +..+++|.+ .. +..+++ .+ |...
T Consensus 254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (657)
T 4fix_A 254 GGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAA 332 (657)
T ss_dssp HHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccc
Confidence 9999999999874 899999999999998 9999999962 345777643 21 111111 01 1111
Q ss_pred cCCcccc--------chHHHHHHHhcccCCcceeeeceee-eEEeeehhhHhhcccc--cccccCCCchhHHHHHHHHHc
Q psy14856 427 NADGFYA--------RSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIK--TIYTLNSMDYDMAFCTNLRNK 495 (734)
Q Consensus 427 ~~~GyY~--------Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~--~~f~~~~~deDm~Fc~~ar~~ 495 (734)
+.+.|. +...+... .. .....|++++ ++.||+++++++ .+. +.|. ..||+.||.+++++
T Consensus 333 -~~~~~~~~f~~~~l~~~~~~~~---~~--~~~~~v~~~~g~~~lirr~v~~~-vGgfd~~F~---~~ED~Dl~lR~~~~ 402 (657)
T 4fix_A 333 -PHAEYDHDFAEYPLNDNNSRSK---LL--HRRIDVDYNGWWTCMIPRQVAEE-LGQPLPLFI---KWDDADYGLRAAEH 402 (657)
T ss_dssp -TTCCSCEETTTSCSSCSSHHHH---GG--GBCCCCSBCCTTEEEEEHHHHHH-HCSCCSCSS---SSHHHHHHHHHHHT
T ss_pred -cccccccccccccccccccccc---cc--ccceeccccchhHhHhhHHHHHH-hCCChhHhc---cCcHHHHHHHHHHc
Confidence 111111 10001010 01 1223455555 577899999998 432 3333 46999999999999
Q ss_pred CeeEEEecccceEEe
Q psy14856 496 GIHLKIDSTQEYGHL 510 (734)
Q Consensus 496 Gi~myv~N~~~~G~l 510 (734)
|+.+++++....-|.
T Consensus 403 G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 403 GYPTVTLPGAAIWHM 417 (657)
T ss_dssp TCCEEEEEEEEEEEC
T ss_pred CCeEEEECCEEEEEc
Confidence 999999998888884
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.55 E-value=6.2e-14 Score=158.62 Aligned_cols=210 Identities=11% Similarity=0.142 Sum_probs=144.3
Q ss_pred CCCcEEEEEEecCChh-HHHHHHHHHHcccCCCceEEE-EEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 289 QFPSVLISVFIDKPTA-FLEEFLNKIANLNYPAKKISM-FVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~-~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
..|+|+|+||+||++. .|.++|+||.++.||....+| +|+| |+|.|.+.+ + ..++.|+++..+++.|.+.
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~----~~~~~v~vi~~~~n~G~~~ 136 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---L----GKIEKVRVLRNDRREGLMR 136 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---G----GGBTTEEEEECSSCCHHHH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---H----hcCCCEEEEECCCCcCHHH
Confidence 5799999999999987 999999999999999874554 3444 888885322 2 2356899999999999999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecccC--CCccc-----cccccccc-CCcccc
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLLVR--PFKAW-----SNFWGALN-ADGFYA 433 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l~~--~~~~w-----sNFWgal~-~~GyY~ 433 (734)
|+|.|++.| ++||++|+|+|+.++ |+.|+.|++. ...+|+|.+.. ...+. ..+.+... .-++.+
T Consensus 137 A~N~G~~~A---~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (501)
T 2ffu_A 137 SRVRGADAA---QAKVLTFLDSHCECN-EHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKW 212 (501)
T ss_dssp HHHHHHHHC---CSSEEEECCSSEEEC-TTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEE
T ss_pred HHHHHHHhc---CCCEEEEECCCcccC-ccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCcc
Confidence 999999886 699999999999997 9999999963 34588886521 11100 00000000 000100
Q ss_pred chHHHHHHHhcccCCcceeeeceee-eEEeeehhhHhhcccccccccCC--C-chhHHHHHHHHHcCeeEEEecccceEE
Q psy14856 434 RSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLRNKGIHLKIDSTQEYGH 509 (734)
Q Consensus 434 Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar~~Gi~myv~N~~~~G~ 509 (734)
..-.-.....+.........+|.+. ++++|+++++++ .+ .|+... + .||..||.+++++|..+.+.+...++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~-iG--gfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 289 (501)
T 2ffu_A 213 DYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEE-LG--KYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGH 289 (501)
T ss_dssp EECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHH-TT--CCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHH-hC--CCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEE
Confidence 0000001111110002334566655 578999999998 33 354322 2 899999999999999999999999999
Q ss_pred eec
Q psy14856 510 LVD 512 (734)
Q Consensus 510 l~~ 512 (734)
...
T Consensus 290 ~~r 292 (501)
T 2ffu_A 290 VFR 292 (501)
T ss_dssp CCC
T ss_pred Ecc
Confidence 743
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.55 E-value=1.3e-14 Score=147.48 Aligned_cols=153 Identities=19% Similarity=0.314 Sum_probs=105.1
Q ss_pred CCCceecC-CCCChHHHHHHHHHHHH-hCCCCCCCCCCcccCCCcccccccC-eeeeccchHHHHHHHHHHhhchhhhhh
Q psy14856 557 PCPDVFWF-PIVTEKFCHEFVQIMEA-YGQWSDGTNNDKRLETGYEAVPTRD-IHMKQVGLAGVWAEFLRKYVVPLQERE 633 (734)
Q Consensus 557 ~~p~Vy~f-pv~s~~fC~~Li~e~E~-~g~ws~~~~~~~r~~g~~~~vpt~d-i~~~~~g~~~~~~~~l~~~v~P~~~~~ 633 (734)
..|.|+.+ .+||+++|++|++..+. +....-+.+ . ....++|.. .-+.+ ....+.+.++|..++.
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~--~----~~~~~RtS~~~wl~~----~~~v~~i~~Ri~~~~g-- 104 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS--R----DVNDIRTSSGAFLDD----NELTAKIEKRISSIMN-- 104 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHHHC--------------CCCCGGGTTCEECCC----CHHHHHHHHHHHHHHT--
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC--C----ccCCcEeeeeEEeCC----cHHHHHHHHHHHHhcC--
Confidence 35666666 59999999999999985 333111111 0 011233333 22222 2233345556544332
Q ss_pred hcCCCCCCCCCcceeEEEEcCCCCCCCCccccCC-----------ceEEEEEecCCCCcCCCccEEEeeccceeecccce
Q psy14856 634 FIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSS-----------TYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMG 702 (734)
Q Consensus 634 f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S-----------~~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G 702 (734)
. ... ..+...++||.++++ +++|+|.. .+|+.++||+ .++||+|.|+..+.++. |++|
T Consensus 105 ---l-~~~-~~E~lqv~~Y~~G~~--y~~H~D~~~~~~~~~~~~R~~T~l~YLnd---~~~GGeT~Fp~~~~~V~-P~~G 173 (216)
T 3itq_A 105 ---V-PAS-HGEGLHILNYEVDQQ--YKAHYDYFAEHSRSAANNRISTLVMYLND---VEEGGETFFPKLNLSVH-PRKG 173 (216)
T ss_dssp ---S-CGG-GBCCCEEEEECBTCC--EEEECSSCCTTSGGGGGCEEEEEEEECSC---CSEECCEEETTTTEEEC-CCTT
T ss_pred ---c-eec-cccceeEEEeCCCCc--cccccCCCcCCCcccCCceEEEEEEeccc---CCcCceeEecCCCCEEe-cCCC
Confidence 1 001 356789999998875 89999953 2899999999 78999999998888775 9999
Q ss_pred eEEEeCCC-------cccccCcccCCceeEEEEEeee
Q psy14856 703 WMLMHPGR-------LTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 703 ~al~h~g~-------lth~H~g~~vT~G~Ryilv~F~ 732 (734)
.||+|+.. -..+|+|.||++|+||++..|+
T Consensus 174 ~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~ 210 (216)
T 3itq_A 174 MAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWV 210 (216)
T ss_dssp CEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEE
T ss_pred eEEEEeccCCCCCCCCccccccceeccccEEEEEeeE
Confidence 99999981 0248999999999999999997
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.47 E-value=3.1e-13 Score=161.72 Aligned_cols=200 Identities=13% Similarity=0.153 Sum_probs=133.5
Q ss_pred CCCCcEEEEEEecCChhHH-HHHHHHHHcccCCCceEEEEEec--CCCCcH---------------HHHHHHHHHhccCc
Q psy14856 288 DQFPSVLISVFIDKPTAFL-EEFLNKIANLNYPAKKISMFVYN--NQEYHA---------------PLFDDYIHNFKTMF 349 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L-~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~---------------~il~~f~~~~~~~y 349 (734)
++.|+|+|+||+||+++.+ +++++|+.+|+||+++++++|.+ |+|.|. +.++++.++.
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~---- 212 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL---- 212 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH----
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc----
Confidence 4679999999999999766 99999999999999877765554 788872 2344444443
Q ss_pred ceEEEEeCCCC-CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CCc--eeee-ccc-CCCccccc
Q psy14856 350 KNVKYIAHNST-VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NES--LIAP-LLV-RPFKAWSN 421 (734)
Q Consensus 350 ~~V~ii~~~~~-~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk~--IVaP-~l~-~~~~~wsN 421 (734)
.++++..+++ .|++.|+|.|++.| ++||++++|||++++ |+.|+.+++. +.. +|+. ... .++....+
T Consensus 213 -~v~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~ 287 (802)
T 4hg6_A 213 -GVVYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPS-RDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRN 287 (802)
T ss_dssp -TCEEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEEC-TTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHH
T ss_pred -CcEEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcC-hHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhh
Confidence 4566655555 78999999999886 799999999999997 9999999962 333 3333 221 11100001
Q ss_pred --ccccccCCccccchHHHHHHHhcccCCcceee-eceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHHcCee
Q psy14856 422 --FWGALNADGFYARSFDYMNIINGDQGGKGIWN-VPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIH 498 (734)
Q Consensus 422 --FWgal~~~GyY~Rsedy~~i~~~~~~~~G~~n-VP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~~Gi~ 498 (734)
.+..+. ...+.+........ ..++ ..+.+++.+++++++++ .+ .|....+.||..+|.+++++|+.
T Consensus 288 ~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~G~~~~~Rr~al~~-vG--gf~~~~~~ED~~l~~rl~~~G~r 356 (802)
T 4hg6_A 288 LALGDRCP-----PENEMFYGKIHRGL---DRWGGAFFCGSAAVLRRRALDE-AG--GFAGETITEDAETALEIHSRGWK 356 (802)
T ss_dssp HTCCTTSC-----CTTHHHHHTHHHHH---HHTTCCCCCSSSEEEEHHHHHH-HT--TCCCSSSSHHHHHHHHHHTTTCC
T ss_pred hhHHhhhh-----HHHHHHHHHHHhhH---hhcCCceecccchhhhHHHHHH-cC--CcCCCCcchHHHHHHHHHHcCCe
Confidence 011111 11122222221111 1111 22456788999999998 32 46666678999999999999999
Q ss_pred EEEecccce
Q psy14856 499 LKIDSTQEY 507 (734)
Q Consensus 499 myv~N~~~~ 507 (734)
+..++....
T Consensus 357 i~~~~~~~~ 365 (802)
T 4hg6_A 357 SLYIDRAMI 365 (802)
T ss_dssp EEECCCCCE
T ss_pred EEEecCCEE
Confidence 877775443
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.42 E-value=3.2e-12 Score=148.06 Aligned_cols=212 Identities=12% Similarity=0.081 Sum_probs=137.9
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEE-EEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCC-CCcHH
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISM-FVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-TVNSK 364 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a 364 (734)
...|+|+|+||+||++..|.++|++|.+++||. .++| +|+| |+|.|.++++++.+. ..++++..+. +.|.+
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~~~-----~~i~~i~~~~~~~g~~ 163 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFESL-----LNIKYVRQKDYGYQLC 163 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTTTT-----SCEEEEEECCCSCCHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhhhc-----CCeEEEEeCCCCcchh
Confidence 356999999999999999999999999999874 3443 3444 899999888876422 3677776553 34699
Q ss_pred HHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc---CC--ceeeeccc--CCCccccc----------------
Q psy14856 365 EARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR---NE--SLIAPLLV--RPFKAWSN---------------- 421 (734)
Q Consensus 365 ~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~---nk--~IVaP~l~--~~~~~wsN---------------- 421 (734)
.|+|.|++.| ++||++++|+|++++ |++|+.|++. +. .++++... .....+..
T Consensus 164 ~a~N~g~~~a---~g~~v~~lD~D~~~~-~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (625)
T 2z86_A 164 AVRNLGLRAA---KYNYVAILDCDMAPN-PLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIIT 239 (625)
T ss_dssp HHHHHHHHHC---CSSEEEEECTTEEEC-TTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---
T ss_pred HHHHHHHHhC---CcCEEEEECCCCCCC-HHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhcc
Confidence 9999999886 699999999999997 9999999863 32 34444321 11100000
Q ss_pred ---ccccccC-CccccchHHHHHHHhcccCCcceeeec-eeeeEEeeehhhHhhcccccccccCC--C-chhHHHHHHHH
Q psy14856 422 ---FWGALNA-DGFYARSFDYMNIINGDQGGKGIWNVP-YITNCYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLR 493 (734)
Q Consensus 422 ---FWgal~~-~GyY~Rsedy~~i~~~~~~~~G~~nVP-~v~~~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar 493 (734)
+.+.... .+.-++...+.. ..... .....++ +.+++.+++++++++ .+ .|+... + .||..||.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~g~~~~~rr~~l~~-iG--gfde~~~~~g~ED~dl~~Rl~ 313 (625)
T 2z86_A 240 NNQVAGKVEQNKSVDWRIEHFKN-TDNLR--LCNTPFRFFSGGNVAFAKKWLFR-AG--WFDEEFTHWGGEDNEFGYRLY 313 (625)
T ss_dssp ------------CCCTHHHHHHH-TTTTT--TCSCGGGGCCTTEEEEETHHHHH-HC--CCCTTCSSCCCHHHHHHHHHH
T ss_pred CCchhhhhccCCccccchhhhcc-ccccc--ccCCceeEEeeceeeeEHHHHHH-hC--CCccccccCCcchhhhhhhHH
Confidence 0000000 001111111211 11111 1111222 456788999999998 32 244322 2 69999999999
Q ss_pred HcCeeEEEecccceEEeeccCC
Q psy14856 494 NKGIHLKIDSTQEYGHLVDSEN 515 (734)
Q Consensus 494 ~~Gi~myv~N~~~~G~l~~~~~ 515 (734)
++|..+.+++....-|...+..
T Consensus 314 ~~G~~i~~~p~~~v~H~~~~~~ 335 (625)
T 2z86_A 314 REGCYFRSVEGAMAYHQEPPGK 335 (625)
T ss_dssp HTTCEEEECGGGCEEEECCC--
T ss_pred hCCceEEEcccchhhccCCccc
Confidence 9999999999988888875543
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.42 E-value=1.9e-13 Score=139.36 Aligned_cols=156 Identities=15% Similarity=0.107 Sum_probs=100.3
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCc--ccccccCeeeeccchHHHHHHHHHHhhchhhhhhhcCCC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGY--EAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYH 638 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~--~~vpt~di~~~~~g~~~~~~~~l~~~v~P~~~~~f~~~~ 638 (734)
+..-.+||+++|++||+.++..-+-+. .. +.. .|+. .++.+....+-+-+.+ .....+.++|..++. .
T Consensus 23 ~~~~~fLs~~Ec~~li~~~~~~~~~s~-v~-~~~-~g~~~~~~~R~s~~~~l~~~~~-~~~~~i~~ri~~~~g-----l- 92 (224)
T 2jig_A 23 FLLKNFLSDEECDYIVEKARPKMVKSS-VV-DNE-SGKSVDSEIRTSTGTWFAKGED-SVISKIEKRVAQVTM-----I- 92 (224)
T ss_dssp EEETTCSCHHHHHHHHHHHGGGCEECE-EE-ETT-TTEEEECSSBCSEEEECCTTCS-HHHHHHHHHHHHHHT-----C-
T ss_pred EEEcccCCHHHHHHHHHHhhccCeeee-ee-cCC-CCcccccCCEEEeeeEecCCCC-HHHHHHHHHHHHHhC-----C-
Confidence 456689999999999999986211010 00 000 0110 1233332222221111 223335555543321 1
Q ss_pred CCCCCCcceeEEEEcCCCCCCCCccccC--------------CceEEEEEecCCCCcCCCccEEEeecc-----------
Q psy14856 639 HEPVRAPMSFVVRYRPDEQPSLRPHHDS--------------STYTINIALNQVGVDYEGGGCRFIRYN----------- 693 (734)
Q Consensus 639 ~~~l~~~~~fvvrY~~~~~~~l~~H~D~--------------S~~T~ni~Ln~~~~dfeGGg~~F~~~~----------- 693 (734)
... ..+...++||.+++. +++|+|. +.+|+.++||+ ..+||+|.|+...
T Consensus 93 ~~~-~~e~~qv~rY~~G~~--y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd---~~~GGeT~Fp~~~~~~~~~~~~~c 166 (224)
T 2jig_A 93 PLE-NHEGLQVLHYHDGQK--YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTT---VEEGGETVLPNAEQKVTGDGWSEC 166 (224)
T ss_dssp CGG-GBCCCEEEEEETTCC--EEEECCSSCCTTSSSCCCCSCEEEEEEEECSC---CSEECCEEETTSSSCCCSTTSCTT
T ss_pred Ccc-cccceEEEecCCCcc--ccCcccCCCCccccccccCCCeEEEEEEEecC---CCCCCceeCCCccccccccccccc
Confidence 111 356789999999775 9999994 23999999999 6799999998753
Q ss_pred ---ceeecccceeEEEeCC-------CcccccCcccCCceeEEEEEeee
Q psy14856 694 ---CNVTATRMGWMLMHPG-------RLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 694 ---~~v~~~~~G~al~h~g-------~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
...++|++|.||+|+. .-..+|+|.||++|+||++..|+
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi 215 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWI 215 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEE
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeE
Confidence 2345699999999975 01248999999999999999997
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.35 E-value=7.1e-14 Score=165.43 Aligned_cols=204 Identities=16% Similarity=0.254 Sum_probs=0.0
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARN 368 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN 368 (734)
.|+|+|+||+||.+.+|+++|+||++|+||..+|.| |++ |+|.|.++++++.+++. ..|+++..++|.|.+.|||
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIV-VDDgStD~t~~il~~~~~~~~---~~i~~i~~~~n~G~~~arN 76 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLII-VNDGSTDQSKKLMDEAIKDYD---KNIRFIDLDENSGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCcHHHHHHHHHHhCC---CCEEEEECCCCCCHHHHHH
Confidence 389999999999999999999999999999877643 444 99999999999887643 3789998888999999999
Q ss_pred HHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc--CCcee-eecccCCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 369 LAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR--NESLI-APLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 369 ~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~--nk~IV-aP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
.|++.| ++||++|+|+|.++. |+.|+.|++. +.+++ ++....... -..+. ...... ..+......
T Consensus 77 ~gi~~A---~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~d~v~~~~~~~~~~-~~~~~---~~~~~~---~~~~~~~~~- 144 (729)
T 3l7i_A 77 IALEEV---ETPYFMFLDADDELA-SYAITFYLEKFNNTDGLIAPIHSFTTQ-RPQFV---DLDRVR---VEYFNAKEN- 144 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhc---cCCEEEEECCCCCCC-hhHHHHHHHHhcCCCEEEEeeEEeecC-CCccc---ccccee---eeeecchhh-
Confidence 999887 699999999999997 9999999974 22222 221100000 00000 000000 011111110
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhcccccccccC-CCchhHHHHHHHHHcCeeEEEe-cccceEEeeccC
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLN-SMDYDMAFCTNLRNKGIHLKID-STQEYGHLVDSE 514 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~-~~deDm~Fc~~ar~~Gi~myv~-N~~~~G~l~~~~ 514 (734)
...+--....++.+++++++++ .+ ..|... ...||..||.++..+|..+.+. +...|-|-..+.
T Consensus 145 ---~~~~~~~~~~~~~~~rr~~l~~-~g-l~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~~yr~~~~ 210 (729)
T 3l7i_A 145 ---INSFLRKQSACNIIFRTAIVRA-HH-IRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFYFRGEVYD 210 (729)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ---HHHHhhccchhheeeeHHHHHH-cC-CCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEEEEEecCC
Confidence 1011112234567899999987 32 135433 3789999999999999888777 777666555443
No 14
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.35 E-value=2.9e-12 Score=137.45 Aligned_cols=190 Identities=11% Similarity=0.080 Sum_probs=121.3
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHcccCCC-ceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEe-CCCCCcHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPA-KKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIA-HNSTVNSKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk-~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~-~~~~~g~a~ 365 (734)
..|+|+|+||+||++.+|+++|++|.++.||. .+|.| |+| |+|.|.++++++..+. ...++++. .++|.|.+.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiiv-VDdgS~D~t~~~~~~~~~~~---~~~~~~~~~~~~n~G~~~ 121 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIV-LDSGSTDDTEIRAVAAGARV---VSREQALPEVPIRPGKGE 121 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEE-EECSCCSSHHHHHHHTTCEE---EEHHHHCTTSCCCCSHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEE-EeCCCCchHHHHHHHhhhhh---ccceeeeccCCCCCCHHH
Confidence 46999999999999999999999999999995 56643 554 9999999988763221 12233332 678899999
Q ss_pred HHHHHHHhhhhcCccEEEEECCCcc-CCChHHHHHHHHc---C--CceeeecccCC---CcccccccccccCCccccc--
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSH-LDNPDVLKYLVNR---N--ESLIAPLLVRP---FKAWSNFWGALNADGFYAR-- 434 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~-L~np~tL~~LI~~---n--k~IVaP~l~~~---~~~wsNFWgal~~~GyY~R-- 434 (734)
|+|.|++.| ++||++|+|+|.. +. |+.|+.|++. + ..+|.+-.... +..-..++... .+...+
T Consensus 122 a~n~g~~~a---~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 195 (329)
T 3ckj_A 122 ALWRSLAAS---RGDIVVFVDSDLINPH-PMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATG--GGRVTELV 195 (329)
T ss_dssp HHHHHHHHC---CCSEEEECCTTEESCC-TTHHHHHHHHHHSCSSCCEEEEEEECC-----------------CHHHHHT
T ss_pred HHHHHHHhC---CCCEEEEECCCCCCcC-hHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccC--CCceehhh
Confidence 999999886 6899999999999 76 9999999863 2 34454433211 00000000000 010000
Q ss_pred hHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHHHH-cCe
Q psy14856 435 SFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRN-KGI 497 (734)
Q Consensus 435 sedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~ar~-~Gi 497 (734)
....+...... .+.+ ....+++++++++++++ . .|. ..+.+|..++.++.+ .|+
T Consensus 196 ~~~~~~~~~~~---~~~~-~~~~~g~~~~rr~~l~~-i---~f~-~~~~~D~~l~~r~~~~~g~ 250 (329)
T 3ckj_A 196 ARPLLAALRPE---LGCI-LQPLGGEYAATRELLTS-V---PFA-PGYGVEIGLLVDTFDRLGL 250 (329)
T ss_dssp HHHHHHHHCGG---GGGC-SCTTCSCEEEEHHHHTT-S---CBC-CGGGHHHHHHHHHHHHHCG
T ss_pred HHHHHHHhhhh---hccc-cCCCccceeeeHHHHHh-C---CCC-CCCcccHHHHHHHHHhcCC
Confidence 01112211111 1111 12234567999999998 2 253 446799999998875 564
No 15
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.25 E-value=1.2e-11 Score=136.19 Aligned_cols=192 Identities=11% Similarity=0.131 Sum_probs=121.8
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHc--ccCC-CceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIAN--LNYP-AKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSK 364 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~--LdYP-k~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a 364 (734)
..|+|+|+||+||++..|+++|++|.+ ++|| ..+| |+|+| |+|.|.++++++..+.. ...++++..+.+.|++
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EI-IVVDDgStD~T~~i~~~~~~~v~--~~~~~~i~~~~n~G~g 168 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQI-LVVDADSEDGTAGVAASHGAEVY--SENELMSGYGDAHGKG 168 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEE-EEEECSCSSSHHHHHHHTTCEEE--EGGGTTGGGCSCCSHH
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEE-EEEcCcCCccHHHHHHHhCchhc--ccceeEecCCccCCHH
Confidence 369999999999999999999999987 4675 5555 44554 99999999987643210 1122334556789999
Q ss_pred HHHHHHHHhhhhcCccEEEEECCCcc-CCChHHHHHHHHc-----CCceeeecccCCCcccccccccccCCccccch--H
Q psy14856 365 EARNLAVENSLHKGVDFYFYVDSDSH-LDNPDVLKYLVNR-----NESLIAPLLVRPFKAWSNFWGALNADGFYARS--F 436 (734)
Q Consensus 365 ~arN~al~~a~~~~~DYlf~vDAD~~-L~np~tL~~LI~~-----nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rs--e 436 (734)
.|+|.|++.| ++||++++|||.. +. |+.|..|++. +..+|.....+...-+...+. ...|...+. .
T Consensus 169 ~A~n~G~~~A---~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~--~~~g~v~~~~~~ 242 (387)
T 3f1y_A 169 DAMWRALSVT---RGDLVLYIDADTRDFR-PQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEE--DGGGRVTELTAK 242 (387)
T ss_dssp HHHHHHTTTC---CSSEEEECCTTCSSCC-THHHHTTHHHHHHSTTCCEEEEEEECC-------CC--BCCSHHHHHTHH
T ss_pred HHHHHHHHhc---CCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCCCceEEEEeecccccccccccc--ccCCchhhhhHH
Confidence 9999999886 6999999999999 76 9999999862 345555543222111111000 001111110 1
Q ss_pred HHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccccccccCCCchhHHHHHHH-HHcCee
Q psy14856 437 DYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNL-RNKGIH 498 (734)
Q Consensus 437 dy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~~deDm~Fc~~a-r~~Gi~ 498 (734)
..+....... .++. -..++.+++++++|+. . .|. ..+..|+.++.++ ++.|+.
T Consensus 243 ~l~~~~~~~l--~~~~--d~~sG~~a~rR~~l~~-i---~f~-~gyg~e~ell~~~~~~~G~~ 296 (387)
T 3f1y_A 243 PLFNLFYPEL--AGFV--QPLAGEFVADRELFCS-I---PFL-TGYAVETGIMIDVLKKVGLG 296 (387)
T ss_dssp HHHHHHCGGG--TTCS--CTTCSCEEEEHHHHTT-S---CEE-CSTTHHHHHHHHHHHHHCGG
T ss_pred HHHHHHhHhh--cccc--ccccccEEEEHHHHHh-C---CCC-CCcchHHHHHHHHHHhcCCC
Confidence 1111111111 1111 1134567899999998 2 353 5678899998887 677875
No 16
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.07 E-value=2.7e-10 Score=120.48 Aligned_cols=151 Identities=14% Similarity=0.094 Sum_probs=99.1
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHH---cccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIA---NLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEA 366 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~---~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~a 366 (734)
.|+|+|+||+||++..|.++|++|. ++.|+..+| ++|++++|. ..+.+.+
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EI-iVVdds~d~--------------------------~f~~a~a 116 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGI-YVINQAGDT--------------------------IFNRAKL 116 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEE-EEEEECSSS--------------------------CCCHHHH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceE-EEEEeCCCC--------------------------ccchhhh
Confidence 4899999999999999999999999 788887555 334444442 1246789
Q ss_pred HHHHHHhhhh-cCccEEEEECCCccCCChHHHHHHHHcCCceeeecccCCCcccccccccccCCccccchHHHHHHHhcc
Q psy14856 367 RNLAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGD 445 (734)
Q Consensus 367 rN~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~ 445 (734)
||.|+..|.+ +++||++|+|+|+++. |+.+.. .+. ..+ +..+-++ ..-++ +.
T Consensus 117 ~N~G~~~al~~A~gd~i~flD~D~i~~-~d~~~~--------~~~--~~p-~~~~~~~---~~~~~------------~~ 169 (287)
T 2fy7_A 117 LNVGFQEALKDYDYTCFVFSDVDLIPM-NDHNAY--------RCF--SQP-RHISVAM---DKFGF------------SL 169 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEEECTTEEES-BTTSCC--------SCC--SSC-EECCCEE---GGGTT------------SC
T ss_pred hhhHHHHHHHhCCCCEEEEECCCcccC-CCcceE--------ecC--CCC-ceEEEee---ccccc------------CC
Confidence 9999965543 7899999999999998 774210 000 000 0011111 00011 00
Q ss_pred cCCcceeeeceeeeEEeeehhhHhhcccccccccCC--C-chhHHHHHHHHHcCeeEEEec
Q psy14856 446 QGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLRNKGIHLKIDS 503 (734)
Q Consensus 446 ~~~~G~~nVP~v~~~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar~~Gi~myv~N 503 (734)
. .+ .+.+++.+++++++.+ .+ .|+... + .||++||.+++++|+.+.-..
T Consensus 170 ~--~~----~~~G~~~~~rr~~f~~-vg--GFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~ 221 (287)
T 2fy7_A 170 P--YV----QYFGGVSALSKQQFLT-IN--GFPNNYWGWGGEDDDIFNRLVFRGMSISRPN 221 (287)
T ss_dssp S--ST----TCCCSEEEEEHHHHHH-TT--SCCSCCSSCSCHHHHHHHHHHHTTCCCBCCC
T ss_pred C--cC----ceeeeEEEEEHHHHHH-cC--CCCccccccccchHHHHHHHHHcCCeEEecC
Confidence 0 11 1235678899999998 43 355432 2 499999999999998877443
No 17
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.02 E-value=9.2e-10 Score=113.28 Aligned_cols=166 Identities=12% Similarity=0.048 Sum_probs=100.6
Q ss_pred CCCcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEE-Eec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 289 QFPSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMF-VYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~-I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
..|.|+| |++||++..|++||+||.+ +..+.. ++|+ |+| |+|. .+.++
T Consensus 14 ~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~---------------------------~g~a~ 64 (249)
T 2nxv_A 14 STLMFSV-CSLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQ---------------------------FHGFS 64 (249)
T ss_dssp CCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS---------------------------CCTTT
T ss_pred CcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc---------------------------ccHHH
Confidence 4578998 4679999999999997763 333332 5544 444 4431 24578
Q ss_pred HHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc-------CCc--eeeeccc--C-CCcccccccccccCCcccc
Q psy14856 366 ARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR-------NES--LIAPLLV--R-PFKAWSNFWGALNADGFYA 433 (734)
Q Consensus 366 arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~-------nk~--IVaP~l~--~-~~~~wsNFWgal~~~GyY~ 433 (734)
|+|.|++.| ++||++|+|+|++++ |++|+.|++. +.. +++|... . ++... ++..+ ..|...
T Consensus 65 a~N~Gi~~A---~g~yl~fln~D~~~~-~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~--~~~~~-~~~~~~ 137 (249)
T 2nxv_A 65 WHKQMLPRC---KGRYVIFCHEDVELV-DRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV--TAQAL-HISDVF 137 (249)
T ss_dssp HHHHHGGGC---CSSEEEEEETTEECS-SCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS--CCCEE-EEEETT
T ss_pred HHHHHHHhc---CCCEEEEECCCcccC-ccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee--eeccc-ccCCcc
Confidence 999999886 699999999999996 9999999852 243 4444321 1 11100 00000 001000
Q ss_pred chHHHHHHHhcccCCcceeeeceeeeE-EeeehhhHhhccccccccc---CCCchhHHHHHHHHHcCeeEEEecc
Q psy14856 434 RSFDYMNIINGDQGGKGIWNVPYITNC-YLMKTSVIKATNIKTIYTL---NSMDYDMAFCTNLRNKGIHLKIDST 504 (734)
Q Consensus 434 Rsedy~~i~~~~~~~~G~~nVP~v~~~-~LI~~~vL~~~~~~~~f~~---~~~deDm~Fc~~ar~~Gi~myv~N~ 504 (734)
.. .+..+.....|+++.+| .++++++ . + .|+. ...-+|.+||.+++++|+.+++.+.
T Consensus 138 ~~--------~~~~~~~~~~v~~~~g~~~~~rr~~--~-~---gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~ 198 (249)
T 2nxv_A 138 GN--------DRRRGNVPCRVESLDECFLLMRRLK--P-V---LNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF 198 (249)
T ss_dssp EE--------EEEESCSSEEEEEECTTEEEEETTB--C-C---CCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC
T ss_pred cc--------ccccCCCceEcCeeeeEeeEEEHhh--h-C---CCCCCCCCcceehhHHHHHHHHcCCeEEEecc
Confidence 00 00000112356777654 6788888 3 2 2542 1224699999999999999988763
No 18
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.70 E-value=1.3e-07 Score=97.79 Aligned_cols=168 Identities=13% Similarity=0.109 Sum_probs=99.5
Q ss_pred CceecCCCCChHHHHHHHHHHHHh---CCCCCCCCCCcccCCCcccccccCeeeeccc---hHH--HHHHHHHHhhchhh
Q psy14856 559 PDVFWFPIVTEKFCHEFVQIMEAY---GQWSDGTNNDKRLETGYEAVPTRDIHMKQVG---LAG--VWAEFLRKYVVPLQ 630 (734)
Q Consensus 559 p~Vy~fpv~s~~fC~~Li~e~E~~---g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g---~~~--~~~~~l~~~v~P~~ 630 (734)
+.++.-.+|+++.|++|+++++.. |.+..+.-.... .+..+.+.+..+.+-+-. ... .+...+.+.+.-+.
T Consensus 27 g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~-~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ln 105 (247)
T 2hbt_A 27 GICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQK-SDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCN 105 (247)
T ss_dssp SEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECC-SSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHTT
T ss_pred CEEEECCCCCHHHHHHHHHHHHhhhhcCCcccccccccc-ccccccccccceeeecccccchhHHHHHHHHHHHHHHHHh
Confidence 456777899999999999999974 222222100000 011123444344444322 111 13333332221111
Q ss_pred hhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccCC-----ceEEEEEecCCCC-cCCCccEEEeecc---ceeecccc
Q psy14856 631 EREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSS-----TYTINIALNQVGV-DYEGGGCRFIRYN---CNVTATRM 701 (734)
Q Consensus 631 ~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S-----~~T~ni~Ln~~~~-dfeGGg~~F~~~~---~~v~~~~~ 701 (734)
+. .+.+... ......+.+|.+ .+.++.+|.|.. .+|+.++||+.-. +++||+|+|.... .....|+.
T Consensus 106 ~~-lGl~~i~--~~~e~~~~~Y~~-~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~ 181 (247)
T 2hbt_A 106 GK-LGSYKIN--GRTKAMVACYPG-NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKF 181 (247)
T ss_dssp TT-STTCCEE--EECCEEEEEECS-SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBT
T ss_pred hh-cCccccc--ccceEEEEEecC-CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCC
Confidence 11 1101000 023467899986 234699999973 5999999998221 2459999986543 23456999
Q ss_pred eeEEEeCCCcccccCcccCCceeEEEEEeee
Q psy14856 702 GWMLMHPGRLTHYHEGLQVTQGTRYIMISFV 732 (734)
Q Consensus 702 G~al~h~g~lth~H~g~~vT~G~Ryilv~F~ 732 (734)
|.+|+|+..-...|+++| +.|+||.+.+|+
T Consensus 182 grlv~F~s~~~~~H~V~p-~~~~R~sit~W~ 211 (247)
T 2hbt_A 182 DRLLFFWSDRRNPHEVQP-AYATRYAITVWY 211 (247)
T ss_dssp TEEEEEECSTTCCEEECC-BSSCEEEEEEEE
T ss_pred CEEEEEecCCCceeeecc-CCCEEEEEEEEE
Confidence 999999864213899999 679999999996
No 19
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.58 E-value=4.4e-07 Score=100.11 Aligned_cols=188 Identities=10% Similarity=0.065 Sum_probs=115.2
Q ss_pred EEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEec-CCCCcHHHHHHHHHHhc-cCcceEEEEeCC--C--CCcHHHHH
Q psy14856 295 ISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYN-NQEYHAPLFDDYIHNFK-TMFKNVKYIAHN--S--TVNSKEAR 367 (734)
Q Consensus 295 I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~-~~y~~V~ii~~~--~--~~g~a~ar 367 (734)
|+||.+ ++ .|+.++++|.. +.+|..+| |+|++ |+|+|.+++++..++.. .....|..+... . +.|++.|.
T Consensus 4 VIiP~~-eE-~I~~vl~~l~~~~~~~~~EI-IVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al 80 (397)
T 2bo4_A 4 VVFPFK-HE-HPEVLLHNVRVAAAHPRVHE-VLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGM 80 (397)
T ss_dssp EEEECC-SS-CHHHHHHHHHHHHHSTTCCE-EEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHH
T ss_pred EEEeCC-cc-CHHHHHHHHHHhccCCCeEE-EEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHH
Confidence 455555 44 58999998863 45777676 44554 99999999997766543 111123222212 2 78999999
Q ss_pred HHHHHhhh-hcCccEEEEECCCcc-CCChHHHHHHHH---cCCceeeecccCC--CcccccccccccCCccccchHHHHH
Q psy14856 368 NLAVENSL-HKGVDFYFYVDSDSH-LDNPDVLKYLVN---RNESLIAPLLVRP--FKAWSNFWGALNADGFYARSFDYMN 440 (734)
Q Consensus 368 N~al~~a~-~~~~DYlf~vDAD~~-L~np~tL~~LI~---~nk~IVaP~l~~~--~~~wsNFWgal~~~GyY~Rsedy~~ 440 (734)
+.|++.|+ .+++|+++++|||.. .+ |+.|..|++ .+.++|.+...+. +....+.. . .-.+.
T Consensus 81 ~~G~~~Al~~a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~---------~--~~ll~ 148 (397)
T 2bo4_A 81 NTALRYFLEETQWERIHFYDADITSFG-PDWITKAEEAADFGYGLVRHYFPRASTDAMITWMI---------T--RTGFA 148 (397)
T ss_dssp HHHHHHHHHHCCCSEEEECCTTCSSCC-HHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHT---------H--HHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCC-HHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHH---------H--HHHHH
Confidence 99998887 789999999999996 65 999999986 3456666543221 11101100 0 00111
Q ss_pred HHhcccCCcceeeeceeeeEEeeehhhHhhcccc-ccc-ccCCCchhHHHHHHHHHcCeeEE
Q psy14856 441 IINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK-TIY-TLNSMDYDMAFCTNLRNKGIHLK 500 (734)
Q Consensus 441 i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~-~~f-~~~~~deDm~Fc~~ar~~Gi~my 500 (734)
..-+.. ...-..-| .++-+++++++++. -.. ..+ ....++.|+.+...|.++|+.+.
T Consensus 149 ~~~~~~-~~~~i~dp-~sG~~a~~R~vl~~-l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~ 207 (397)
T 2bo4_A 149 LLWPHT-ELSWIEQP-LGGELLMRREVAAM-LYEDERVRRRSDWGIDTLYTFVTVQQGVSIY 207 (397)
T ss_dssp HHCTTS-SGGGCSCT-TCCCEEEEHHHHHH-HHHCHHHHTCCSTTHHHHHHHHHHHTTCCEE
T ss_pred HHHHHh-hccccccC-CcccEEEeHHHHHH-HhhhcccCcCCCcchHHHHHHHHHHcCCEEE
Confidence 111100 01111223 24556899999987 211 111 23457889999999999998875
No 20
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.55 E-value=2e-07 Score=99.96 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=81.4
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCc---HHHHHHHHHHhccCcceEEEEeCCCCCcHHH
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYH---APLFDDYIHNFKTMFKNVKYIAHNSTVNSKE 365 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t---~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ 365 (734)
..+++|+||+||++.. +|++++++.+.+.+| |+|+| |+|++ .+++++|.+... ..+.+|. ++|.|.+.
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d~eI-IlVdDGS~D~s~~e~dil~~~~~~~~---~ri~viH-Qkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHEALI-LVASNSSPDRFQMERDLLEEFAHLTE---RPALIFH-QKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTTSEE-EEEECCCHHHHHHHHHHHHHHHHHTT---CCEEEEE-TTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCCceE-EEEECCCCCChHhHHHHHHHHHhhcc---cceEEEe-ccChHHHH
Confidence 5789999999999975 799999999998777 45666 89999 678889986432 4688884 66888888
Q ss_pred HHHH-----------------------HHHhhhhcCccEEEEECCCccCCChHHHHHHH
Q psy14856 366 ARNL-----------------------AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLV 401 (734)
Q Consensus 366 arN~-----------------------al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI 401 (734)
|||. |+..|+...+||+-|+|||..+. .++.+.+-
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~-~~v~Eyvk 181 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFP-GAVWEYVR 181 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCH-HHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCc-cCHHHHHH
Confidence 8862 67777667899999999999995 55555443
No 21
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=98.36 E-value=3.6e-06 Score=83.17 Aligned_cols=158 Identities=14% Similarity=0.166 Sum_probs=105.0
Q ss_pred EEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhh-cCccEEEEECCC---ccCCChHH
Q psy14856 323 ISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLH-KGVDFYFYVDSD---SHLDNPDV 396 (734)
Q Consensus 323 i~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~-~~~DYlf~vDAD---~~L~np~t 396 (734)
+.+||-+ |+- .. ++.++.+.+- .+.+... ..-.+.|||..+...++ .++||++++||| .-.+ |+.
T Consensus 3 ~~~~~~~~~~~~--l~-l~~~l~~~gi---~~~l~~~--~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~Fd-Pe~ 73 (203)
T 2c0n_A 3 TLFFIPSMGSVR--LP-LIDFLVKNDI---EYVILSR--RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEID-FQK 73 (203)
T ss_dssp EEEEEECSSCCC--HH-HHHHHHHTTC---CEEEECC--CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECC-HHH
T ss_pred eEEEeccCCcee--hH-HHHHHHhCCC---eEEEEcc--ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccC-HHH
Confidence 4456665 332 22 4445555542 3444444 44578999999998766 789999999999 8886 999
Q ss_pred HHHHHHcCCceeeecccCCC-cccccccccccCCccccchHHHHHHHhcccCCcceeeeceeee-EEeeehhhHhhcccc
Q psy14856 397 LKYLVNRNESLIAPLLVRPF-KAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITN-CYLMKTSVIKATNIK 474 (734)
Q Consensus 397 L~~LI~~nk~IVaP~l~~~~-~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~-~~LI~~~vL~~~~~~ 474 (734)
+..|++.+++||+..-...+ .-.+. . +.+|...+ .+ -.|-+..+ ..+|+|+++++ -..
T Consensus 74 V~rLl~~g~DVV~GsYp~K~~~~~s~----~--------a~~y~~~i------~~-~~V~d~~tGF~lIkR~V~e~-L~~ 133 (203)
T 2c0n_A 74 VEAKFNEGYDVVCGYYYLKTLRGYSV----Y--------RKDWEKEI------FD-GEVNGCGLGFTFIKREFLEK-IKR 133 (203)
T ss_dssp HHHHHHHTCSEEEEECBCTTSSSBSE----E--------SSSBCSSC------CC-EECSEECSSEEEEEHHHHTT-SCS
T ss_pred HHHHHhCCCCEEEEEeeccCCCccch----H--------HHHHHHhc------cC-ceeeeccccEEEEhHHHHHH-Hhh
Confidence 99999999999998764322 10000 0 01221111 12 25656655 55799999998 323
Q ss_pred ccc-------ccCCCchhHHHHHHHHHcCeeE-------EEecccceEE
Q psy14856 475 TIY-------TLNSMDYDMAFCTNLRNKGIHL-------KIDSTQEYGH 509 (734)
Q Consensus 475 ~~f-------~~~~~deDm~Fc~~ar~~Gi~m-------yv~N~~~~G~ 509 (734)
+.| .....+||..||..++.+|..+ +++.+...||
T Consensus 134 p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T 2c0n_A 134 PAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFIDERLALSP 182 (203)
T ss_dssp SCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESSSSEEECT
T ss_pred hhhhcCChhhhccccCCceEEEeccccccccccccccceeeccccccCc
Confidence 666 2346789999999999999999 8888888776
No 22
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=97.69 E-value=0.00037 Score=76.31 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=71.5
Q ss_pred CcEEEEEEecCChhH-HHHHHHHHHcccCCCceEEEEEec-CCCCc------HHHHHHHHHHhccCcceEEEEeCCC---
Q psy14856 291 PSVLISVFIDKPTAF-LEEFLNKIANLNYPAKKISMFVYN-NQEYH------APLFDDYIHNFKTMFKNVKYIAHNS--- 359 (734)
Q Consensus 291 P~V~I~I~i~n~~~~-L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t------~~il~~f~~~~~~~y~~V~ii~~~~--- 359 (734)
.+|+|+||++||+.. |...|..+ .|. .+| |+|++ |.|.| .+++++|.+... +.+.++..+.
T Consensus 51 ~~iSVVIP~yNEE~~lI~~vL~~i---~~~-~eI-IvVDDgSrD~tD~~~~~~~~l~~~~~~~~---~~~~Vl~~~~p~v 122 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHLVDGVLKAI---PHK-CPI-IIVSNSKREGPNRYKLEVDLIRHFYNLTH---SKIIMIHQKDPGL 122 (394)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHS---CTT-SCE-EEEECCCCSSSCHHHHHHHHHHHHHHHHC---CCEEEEETTCHHH
T ss_pred CCEEEEEecCcccHHHHHHHHHcC---CCC-cEE-EEEECcCcccccchhhHHHHHHHHhhccc---cceEEEecCCcch
Confidence 479999999999964 45554444 443 344 45555 87777 678888876532 2344444332
Q ss_pred -------------------CCcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 360 -------------------TVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 360 -------------------~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
+.|+.+|--.|+..|+..++||+.++|||. . .|..+..+++
T Consensus 123 ~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~-iP~~v~~~~k 182 (394)
T 2zu9_A 123 AKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-Y-IPGAVNEYVK 182 (394)
T ss_dssp HHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-S-CHHHHHHHHH
T ss_pred hHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-C-CHHHHHHHHH
Confidence 148888899999888555899999999999 3 4998877775
No 23
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.04 E-value=0.0027 Score=64.12 Aligned_cols=83 Identities=12% Similarity=-0.003 Sum_probs=65.1
Q ss_pred CCcceeEEEEcCCCCCCCCcccc-CCceEEEEEecCCCCcCCCccEEEeecc-------------------c-eeecccc
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHD-SSTYTINIALNQVGVDYEGGGCRFIRYN-------------------C-NVTATRM 701 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D-~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-------------------~-~v~~~~~ 701 (734)
....+.+++|.++. ...+|.| ++.+|..++|+.++ +||.+.|...+ . ....|+.
T Consensus 101 ~i~~~W~~~~~~G~--~~~~H~H~~~~lSgV~Yl~~p~---~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~ 175 (216)
T 2rg4_A 101 RLEDIWINILPEGG--VHGSHIHPHSVISGTTYVAMPE---GTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKV 175 (216)
T ss_dssp EEEEEEEEEECTTC--CEEEECCTTCSEEEEEEEECCS---CSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCT
T ss_pred EEeeEEEEEcCCCC--cccCccCCCCeEEEEEEEECCC---CCccEEEeCCccccccccCcccccCcccCCCeeEecCCC
Confidence 34568999998876 4778888 47899999999843 79999997532 1 1457999
Q ss_pred eeEEEeCCCcccccCcccCCc-eeEEEEEeee
Q psy14856 702 GWMLMHPGRLTHYHEGLQVTQ-GTRYIMISFV 732 (734)
Q Consensus 702 G~al~h~g~lth~H~g~~vT~-G~Ryilv~F~ 732 (734)
|..|+||+.| .|+..|..+ +.|+.+..-+
T Consensus 176 G~lvlFpS~l--~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 176 GDVLLWESWL--RHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp TEEEEEETTS--CEEECCCCSSSCEEEEEEEE
T ss_pred CeEEEECCCC--EEeccCCCCCCCEEEEEEEe
Confidence 9999999997 799999776 6787765543
No 24
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.03 E-value=0.00045 Score=74.62 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=70.3
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec--CCCCcHHHHHHHHHHhccCcceEEEEe---------CCC
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN--NQEYHAPLFDDYIHNFKTMFKNVKYIA---------HNS 359 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n--s~D~t~~il~~f~~~~~~~y~~V~ii~---------~~~ 359 (734)
+.+.|+|+++|..+ |..+|++|.++..++....|+|.+ +.+.+.+++++| +. .|+.+. .++
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~----~~---~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASY----GS---AVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTT----GG---GSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHc----CC---ceEEEEcCCccccccchh
Confidence 45789999999998 999999999998665433344432 544444444443 21 233321 344
Q ss_pred CCcHH------HHHHHHHHhhhh-cCccEEEEECCCccCCChHHHHHHHH------cCCceee
Q psy14856 360 TVNSK------EARNLAVENSLH-KGVDFYFYVDSDSHLDNPDVLKYLVN------RNESLIA 409 (734)
Q Consensus 360 ~~g~a------~arN~al~~a~~-~~~DYlf~vDAD~~L~np~tL~~LI~------~nk~IVa 409 (734)
|.|.+ +....|+..+-+ ..+||++++|-|+++. |+.++.+.+ .+..|.+
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~s-pdF~~y~~~~l~~y~~D~~I~~ 135 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVA-PDFFEYFQATYPLLKADPSLWC 135 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEEC-TTHHHHHHHHHHHHHHCTTEEE
T ss_pred hcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeEC-HHHHHHHHHHHHHhhcCCcEEE
Confidence 54532 333344444332 4799999999999998 998876664 3555543
No 25
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=96.92 E-value=0.0032 Score=71.82 Aligned_cols=170 Identities=11% Similarity=0.060 Sum_probs=107.6
Q ss_pred CCCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccC------eeeeccchHHHHHHHHHHh--
Q psy14856 554 NNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRD------IHMKQVGLAGVWAEFLRKY-- 625 (734)
Q Consensus 554 ~~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~d------i~~~~~g~~~~~~~~l~~~-- 625 (734)
..+|.|.++.-.++++++-+.+.+++..--.|.. +.. . -|+-..+.| +...++.....|..+....
T Consensus 30 ~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~-Ket--D---lYk~~QsgdLanl~~l~~e~l~~lp~l~~Lr~~L~S 103 (633)
T 3kt7_A 30 DSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTK-KET--D---IYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYS 103 (633)
T ss_dssp TCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEE-EEC--S---SEEEEECCCTTCTTSCCTTCCTTCHHHHHHHHHHTS
T ss_pred cCCCcceEEECCCCCHHHHHHHHHHhhhccCccc-ccc--c---ccceeccccccccccCChhhhccChHHHHHHHHHhc
Confidence 4679999999999999999999999984333421 110 0 021122222 2223333334555544333
Q ss_pred --hchhhhhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccCC---ceEEEEEecCCC---CcCCCccEEEeecc----
Q psy14856 626 --VVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSS---TYTINIALNQVG---VDYEGGGCRFIRYN---- 693 (734)
Q Consensus 626 --v~P~~~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S---~~T~ni~Ln~~~---~dfeGGg~~F~~~~---- 693 (734)
++..++++++--...+ ...++.+.+|.+|. ++.+|.|.. .+|+.++||+++ ....||.+++....
T Consensus 104 ~~Fr~~Ls~iTGi~~Lsg-~~~D~~~a~Y~~G~--fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~ 180 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGKLSG-SKTDMSINTYTKGC--HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNV 180 (633)
T ss_dssp HHHHHHHHHHHTCCCCCS-SCCCEEEEEECTTC--EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTE
T ss_pred HHHHHHHHHHhCCcccCC-CceeEEEEEeCCCC--eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCC
Confidence 3344444444211111 23457788997776 599999963 499999999852 24579999986543
Q ss_pred -----ceeecccceeEEEeCCC-cccccCcccCC-ceeEEEEEeee
Q psy14856 694 -----CNVTATRMGWMLMHPGR-LTHYHEGLQVT-QGTRYIMISFV 732 (734)
Q Consensus 694 -----~~v~~~~~G~al~h~g~-lth~H~g~~vT-~G~Ryilv~F~ 732 (734)
.....|.-|.+++|.-. =.-.|+..+|+ ...|+.+.+|+
T Consensus 181 P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF 226 (633)
T 3kt7_A 181 PHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWY 226 (633)
T ss_dssp ECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEE
T ss_pred CCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEe
Confidence 22455999999999532 01389998887 56799999996
No 26
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=96.44 E-value=0.0095 Score=62.15 Aligned_cols=149 Identities=17% Similarity=0.136 Sum_probs=90.9
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHc-ccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIAN-LNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~-LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~ 369 (734)
-+|.|+||-||.+.-|..||..|.. |.=-+....|||.+..|. ..-..+++.|.
T Consensus 51 ~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~~~-------------------------~~FNRa~LlNv 105 (287)
T 3lw6_A 51 HKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDR-------------------------FRFNRASLINV 105 (287)
T ss_dssp CEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS-------------------------SCCCHHHHHHH
T ss_pred ceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCC-------------------------Cccchhheecc
Confidence 5899999999999999999977761 111123345677663332 12346789999
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHcCCce-eeecccCCCcccccccccccCCccccchHHHHHHHhcccCC
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESL-IAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGG 448 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~nk~I-VaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~ 448 (734)
|...|. ..+||++|-|.|.+..|...+- ..+- ..|......+ -+|--. |
T Consensus 106 Gf~ea~-~~~d~~ifHDVDLlP~dd~n~Y-----~c~~~~~P~Hls~~~-----------~~~~~~---Y---------- 155 (287)
T 3lw6_A 106 GFQFAS-DVYDYIAMHDVDLLPLNDNLLY-----EYPSSLGPLHIAGPK-----------LHPKYH---Y---------- 155 (287)
T ss_dssp HHHHSC-TTCCEEEEECTTEEECCTTSCC-----CCCCTTCCEESSCTT-----------TCSSCC---C----------
T ss_pred cHHHHh-ccCCEEEEecccccccCCCccc-----cCCCCCCceEEeecc-----------ccCCCC---c----------
Confidence 998886 4689999999999998542220 0000 0122211000 000000 0
Q ss_pred cceeeeceeeeEEeeehhhHhhcccc--cccccCCCchhHHHHHHHHHcCeeEEE
Q psy14856 449 KGIWNVPYITNCYLMKTSVIKATNIK--TIYTLNSMDYDMAFCTNLRNKGIHLKI 501 (734)
Q Consensus 449 ~G~~nVP~v~~~~LI~~~vL~~~~~~--~~f~~~~~deDm~Fc~~ar~~Gi~myv 501 (734)
..++++++.+.++.+.+ ... ..|..+. .||.+|..|++.+|+.+.=
T Consensus 156 -----~~~~GGv~a~~re~f~k-VNGFsn~f~GWG-gEDdD~~~Rl~~~G~~i~R 203 (287)
T 3lw6_A 156 -----DNFVGGILLVRREHFKQ-MNGMSNQYWGWG-LEDDEFFVRIRDAGLQVTR 203 (287)
T ss_dssp -----TTCCCSEEEEEHHHHHH-TTSCCSCCCSSS-SHHHHHHHHHHHTTCCCBC
T ss_pred -----CCccccEEeccHHHHHH-cCCCCCcCcCCC-ccchHHHHHHHHcCCcEEc
Confidence 11334667888888877 322 4454444 7899999999999987653
No 27
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=95.98 E-value=0.051 Score=56.99 Aligned_cols=162 Identities=12% Similarity=0.048 Sum_probs=85.2
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCC-CC--CcccC-CCcccccccCeeeec---cchHHHHHHHHH-Hhhchhhhh
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGT-NN--DKRLE-TGYEAVPTRDIHMKQ---VGLAGVWAEFLR-KYVVPLQER 632 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~-~~--~~r~~-g~~~~vpt~di~~~~---~g~~~~~~~~l~-~~v~P~~~~ 632 (734)
|....+|+++.|++|.++++..-...... +. ...+. +.-+.+|... .++. ......+.+++. ..|..+++.
T Consensus 37 vvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~l~~~~~~ 115 (308)
T 2a1x_A 37 LVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEK-MITKVQDFQEDKELFRYCTLPEILKYVEC 115 (308)
T ss_dssp EEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----E-ECCEEECCTTSHHHHHHHHCHHHHHHHHH
T ss_pred EEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHH-HHhhhhhhhhCHHHHHHHhCHHHHHHHHH
Confidence 55667999999999999999863311100 00 00000 0000011110 1111 112333444332 345556666
Q ss_pred hhcCCCCCCCCCcceeEEEEcCCCCC---CCCccccCC---------ceEEEEEecCCCCcCCCccEEEee-c-------
Q psy14856 633 EFIGYHHEPVRAPMSFVVRYRPDEQP---SLRPHHDSS---------TYTINIALNQVGVDYEGGGCRFIR-Y------- 692 (734)
Q Consensus 633 ~f~~~~~~~l~~~~~fvvrY~~~~~~---~l~~H~D~S---------~~T~ni~Ln~~~~dfeGGg~~F~~-~------- 692 (734)
+.+. .+......+..-.|+... ...+|.|.+ .+|+-|+|.+. .=+.|++.|.. .
T Consensus 116 llG~----~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~~p~~~~v~~wiaL~D~--~~enG~l~~vPGSH~~~~~~ 189 (308)
T 2a1x_A 116 FTGP----NIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHI--SRNNGCLVVLPGTHKGSLKP 189 (308)
T ss_dssp HHCS----SEEEEEEEEEEECCC--------CCBCGGGGCCEECGGGEEEEEEESSCB--CTTBTCEEECTTGGGSCCCC
T ss_pred hcCC----CcceecceEEEcCCCCCCCccCCCCccCCccccCCCCCCeEEEEEEeecc--CCCCCcEEEEcCCCCCcccc
Confidence 6652 112222222223454332 268999953 37899999985 45678888731 0
Q ss_pred ------------------------cceeecccceeEEEeCCCcccccCcccCC-ceeEEEEEee
Q psy14856 693 ------------------------NCNVTATRMGWMLMHPGRLTHYHEGLQVT-QGTRYIMISF 731 (734)
Q Consensus 693 ------------------------~~~v~~~~~G~al~h~g~lth~H~g~~vT-~G~Ryilv~F 731 (734)
......-++|.+++|.|++ +|++.+-+ ...|.++..-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~~~~--~H~s~~N~s~~~R~~~~~~ 251 (308)
T 2a1x_A 190 HDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLL--IHGSGQNKTQGFRKAISCH 251 (308)
T ss_dssp CCC-----------CCCCC-CCCSCCEEECBCTTCEEEECTTC--CEEECCBCSSSCEEEEEEE
T ss_pred ccccccccCccccccCCccccccCCeEEccCCCccEEEECCCc--cccCCCCCCCCceEEEEEE
Confidence 0011235899999999996 89999864 4678777653
No 28
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=95.20 E-value=0.19 Score=51.91 Aligned_cols=155 Identities=19% Similarity=0.209 Sum_probs=86.3
Q ss_pred eecCCCCChHHHHHHHHHHHHhCC---CCCCCCCCcccCCCcccccccCeeeeccc---hHH--HHHHHH-HHhhchhhh
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQ---WSDGTNNDKRLETGYEAVPTRDIHMKQVG---LAG--VWAEFL-RKYVVPLQE 631 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~---ws~~~~~~~r~~g~~~~vpt~di~~~~~g---~~~--~~~~~l-~~~v~P~~~ 631 (734)
|....+|+++.|++|.++++..-. ....... ..+.. +.. +.+.. +.+ .+.+++ ...|..+++
T Consensus 34 vvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p~~~---~~~~~--~~~----~~~~~~~~~~~~~~~~~l~~~p~l~~~~~ 104 (288)
T 2rdq_A 34 LFLRNVLDRDLVKTVAEQMREGLVALGAADPHAT---LEELT--IDS----FESVDEVAMHDYVKYDAFWNNPSTIKVFE 104 (288)
T ss_dssp EEECSCSCHHHHHHHHHHHHHHHHHHSCCCTTCC---TTTCC--CSC----STTSCHHHHHHHCCHHHHHTSHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHhcCCCCCCCC---cchhh--hhh----hcccccccccchHHHHHHHcCHHHHHHHH
Confidence 455579999999999999996521 0111000 00000 000 01110 111 122222 224445556
Q ss_pred hhhcCCCCCCCCCcceeEEEEcCCC--------CCCCCccccC-------CceEEEEEecCCCCcCCCccEEEeec----
Q psy14856 632 REFIGYHHEPVRAPMSFVVRYRPDE--------QPSLRPHHDS-------STYTINIALNQVGVDYEGGGCRFIRY---- 692 (734)
Q Consensus 632 ~~f~~~~~~~l~~~~~fvvrY~~~~--------~~~l~~H~D~-------S~~T~ni~Ln~~~~dfeGGg~~F~~~---- 692 (734)
.+++. ........+++..|+. .....+|.|. ..+|+.|+|.+. .=+.|+++|..-
T Consensus 105 ~llG~----~~~l~~~~~~~~~p~~~~~k~p~~g~~~~wHqD~~~~~~~~~~v~~wiaL~d~--~~enG~l~vvPGSH~~ 178 (288)
T 2rdq_A 105 QVFGE----PVFVFLSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIGPNQDFRTFWIPLIRT--TRESGGVALADGSHRR 178 (288)
T ss_dssp HHHSS----CEEEEEEEEEEEECCCTTCSSCCCTTSCCSBCHHHHSCSCCCCEEEEEESSCC--CTTTCEEEEETTTTSS
T ss_pred HHhCC----CceeeeeeeeeecCCcccccccCcCCCcCccccccccCCCCCeEEEEEECCCC--CccCCcEEEEeCCccc
Confidence 66542 1122222334434554 4578999995 357899999985 457888888310
Q ss_pred --cc----------------------------eeecccceeEEEeCCCcccccCcccCCce----eEEEEEeee
Q psy14856 693 --NC----------------------------NVTATRMGWMLMHPGRLTHYHEGLQVTQG----TRYIMISFV 732 (734)
Q Consensus 693 --~~----------------------------~v~~~~~G~al~h~g~lth~H~g~~vT~G----~Ryilv~F~ 732 (734)
.+ ....-++|.+++|.|++ +|++.+-++. +|+.++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~lf~~~~--~H~s~~N~s~~~R~~R~s~~~~~ 250 (288)
T 2rdq_A 179 GKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFHAHM--CHKSIPNLSKDPRLMRMSMDTRV 250 (288)
T ss_dssp CCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEEEEETTC--CEEEECCCCCTTCCCEEEEEEEE
T ss_pred cccccccchhhhccCcccccCCCccccccCceeecccCCCCEEEEeCCc--eecCCCCCCCCccceEEEEEEEE
Confidence 00 01235899999999996 8999997765 477776643
No 29
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=94.46 E-value=0.14 Score=52.96 Aligned_cols=73 Identities=23% Similarity=0.325 Sum_probs=50.8
Q ss_pred cCCCCCCCCccccCC---------ceEEEEEecCCCCcCCCccEEEee----cc-------c------------------
Q psy14856 653 RPDEQPSLRPHHDSS---------TYTINIALNQVGVDYEGGGCRFIR----YN-------C------------------ 694 (734)
Q Consensus 653 ~~~~~~~l~~H~D~S---------~~T~ni~Ln~~~~dfeGGg~~F~~----~~-------~------------------ 694 (734)
.|+......+|.|.+ .+|+.|+|.+. .=++|+++|.. .. +
T Consensus 146 ~Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~--~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T 2opw_A 146 QPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA--TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARD 223 (291)
T ss_dssp CTTTBCCEEEECGGGTSCEESSSCEEEEEEESSCB--CTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCC
T ss_pred CCCCCCCcCCeeCCcccccCCCCceEEEEEEcccC--CCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCC
Confidence 366555689999963 58888999885 45788888831 00 0
Q ss_pred ----eeecccceeEEEeCCCcccccCcccCCc-eeEEEEE
Q psy14856 695 ----NVTATRMGWMLMHPGRLTHYHEGLQVTQ-GTRYIMI 729 (734)
Q Consensus 695 ----~v~~~~~G~al~h~g~lth~H~g~~vT~-G~Ryilv 729 (734)
....-++|.+++|.|++ +|++.+-++ ..|.+++
T Consensus 224 ~~~~v~~~~~aGd~~~f~~~~--~H~s~~N~s~~~R~~~~ 261 (291)
T 2opw_A 224 NSLFVPTPVQRGALVLIHGEV--VHKSKQNLSDRSRQAYT 261 (291)
T ss_dssp GGGCEEECBCTTCEEEEETTC--EEEECCBCSSSCCCEEE
T ss_pred cCCeeecccCCCcEEEEcCCc--eecCCCCCCCCceEEEE
Confidence 11235899999999996 899988654 4565554
No 30
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=94.21 E-value=0.3 Score=51.13 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=24.1
Q ss_pred ccceeEEEeCCCcccccCcccCC---ceeEEEEEe
Q psy14856 699 TRMGWMLMHPGRLTHYHEGLQVT---QGTRYIMIS 730 (734)
Q Consensus 699 ~~~G~al~h~g~lth~H~g~~vT---~G~Ryilv~ 730 (734)
.++|.+++|.+++ +|++.+-+ ...|..++.
T Consensus 224 ~~aGd~v~f~~~l--~H~s~~N~~ss~~~R~a~~~ 256 (313)
T 2fct_A 224 MKAGQFIIFWSTL--MHASYPHSGESQEMRMGFAS 256 (313)
T ss_dssp BCTTEEEEEETTS--EEEECCBCSSSSSCEEEEEE
T ss_pred eCCceEEEEeCCc--eeeCCCCCCCCCCceEEEEE
Confidence 5899999999996 89999976 446776653
No 31
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=94.17 E-value=0.17 Score=53.07 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=67.0
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCCCCCccc-CCCcccccccCeeeeccchHHHHHHHHHHhhchhhhhhhcCCCC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRL-ETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHH 639 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~-~g~~~~vpt~di~~~~~g~~~~~~~~l~~~v~P~~~~~f~~~~~ 639 (734)
++.-.|||+++-++|.++++...+-+........+ .++-+.+.+.+-..+.++.. ....+..++.-+++.+.+
T Consensus 43 Lvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h--~~s~l~~rll~vl~~LlG---- 116 (344)
T 3nnf_A 43 CQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYD--FVSSFIQEKLALLNYITG---- 116 (344)
T ss_dssp EEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHH--HHHHHHGGGHHHHHHHHT----
T ss_pred EEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHH--HHHHHHHHHHHHHHHHhC----
Confidence 44557999999999999999884312211111110 01122333333334445432 211122233233333333
Q ss_pred CCCCCcceeEEEEcCCCCCCCCcccc----------CCceEEEEEecCCCCcCCCccEEE
Q psy14856 640 EPVRAPMSFVVRYRPDEQPSLRPHHD----------SSTYTINIALNQVGVDYEGGGCRF 689 (734)
Q Consensus 640 ~~l~~~~~fvvrY~~~~~~~l~~H~D----------~S~~T~ni~Ln~~~~dfeGGg~~F 689 (734)
..+..+....+.+.|+ ...|.||.| +.-+|+-|.|.+.++ -++||+.+
T Consensus 117 ~el~i~qs~~fe~kPG-~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~-e~nGGM~~ 174 (344)
T 3nnf_A 117 KNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITK-EHRGGMQY 174 (344)
T ss_dssp SCEEEEEEEEEEECBT-CCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCT-TTBCSEEE
T ss_pred CceeeeecceEeeCCC-CCCCCceecccccccccCCCCeEEEEEECCCCCc-cCCCceEE
Confidence 2223455566778888 778999999 446999999987553 45666655
No 32
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=93.88 E-value=0.13 Score=54.46 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=84.1
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccC-e-eeecc-chHHHHHHHH-HHhhchhhhhhhcC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRD-I-HMKQV-GLAGVWAEFL-RKYVVPLQEREFIG 636 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~d-i-~~~~~-g~~~~~~~~l-~~~v~P~~~~~f~~ 636 (734)
|....+|+++.|++|.++++..-........+..+. + +..+ + .+..+ ...+.+..++ ...|..+++.+++.
T Consensus 49 vvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~---~--~~~~~~r~~~~~~~~~~~f~~l~~~p~l~~i~~~llG~ 123 (310)
T 3emr_A 49 LQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIR---E--PESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGS 123 (310)
T ss_dssp EEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEE---C--TTTCCEEEEECHHHHCHHHHHHHTCHHHHHHHHHHHTS
T ss_pred EEccCCCCHHHHHHHHHHHHHHHhcccccCCcccee---c--CCCcceeEEeehhhccHHHHHHHhChHHHHHHHHHcCC
Confidence 566689999999999999987633111111111000 0 0000 1 11111 1123333332 23555556666652
Q ss_pred CCCCCCCCcceeEEEEc-CCCCCCCCccccC------------CceEEEEEecCCCCcCCCccEEEee----c--c----
Q psy14856 637 YHHEPVRAPMSFVVRYR-PDEQPSLRPHHDS------------STYTINIALNQVGVDYEGGGCRFIR----Y--N---- 693 (734)
Q Consensus 637 ~~~~~l~~~~~fvvrY~-~~~~~~l~~H~D~------------S~~T~ni~Ln~~~~dfeGGg~~F~~----~--~---- 693 (734)
.+...... +-++ |+......+|.|. ..+|+-|+|.+.. =+.|+++|.. . .
T Consensus 124 ----~~~l~~s~-~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t--~enG~l~viPGSH~~~~~~~g~ 196 (310)
T 3emr_A 124 ----DVYVHQSR-INYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNY--SFNGPLMLIPGSHNYFVSCVGE 196 (310)
T ss_dssp ----CEEEEEEE-EECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBC--SSSCCCEECTTGGGEEEECCC-
T ss_pred ----ceEEEeeE-EEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCC--CcCCCEEEEeCCCCCccccccc
Confidence 11222221 2333 3345678899994 2488999999853 4677888731 0 0
Q ss_pred --------------------------------ceeecccceeEEEeCCCcccccCcccCC-ceeEEEEE
Q psy14856 694 --------------------------------CNVTATRMGWMLMHPGRLTHYHEGLQVT-QGTRYIMI 729 (734)
Q Consensus 694 --------------------------------~~v~~~~~G~al~h~g~lth~H~g~~vT-~G~Ryilv 729 (734)
.....-++|.+++|.|++ +|++.+-+ ...|.++.
T Consensus 197 ~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~~~--~H~s~~N~S~~~R~~l~ 263 (310)
T 3emr_A 197 TPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNT--MHGSTSNITPYPRNNLF 263 (310)
T ss_dssp ----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEETTC--CEEECCCCSSCCCCEEE
T ss_pred ccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeCCc--eecCCCCCCCCCeEEEE
Confidence 011124789999999996 89998854 45565544
No 33
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=93.80 E-value=0.15 Score=54.08 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=83.9
Q ss_pred eecCCCCChHHHHHHHHHHHHh-CCCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHH-HHhhchhhhhhhcCCC
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAY-GQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFL-RKYVVPLQEREFIGYH 638 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~-g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l-~~~v~P~~~~~f~~~~ 638 (734)
|....+|+++.|++|.++++.. ..-...... . ..|.......+.+.. .+.+.+++ ...|..+++.+++.-
T Consensus 26 v~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~-~--~~g~~~~~~~~~~~~----~~~f~~l~~~p~l~~~~~~llG~~- 97 (319)
T 3gja_A 26 IGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYP-D--SNGKANISNYDRHLD----IDLLAEHIMRPEIVDRVGSLIGRN- 97 (319)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHHCCTTCSSC-S--CSSHHHHTTTTGGGT----CHHHHHHHHCHHHHHHHHHHHCSS-
T ss_pred EECcCCCCHHHHHHHHHHHHHHhhcCcccccc-C--CCccchhhhhhhccc----CHHHHHHHcChHHHHHHHHHcCCc-
Confidence 5667899999999999999863 210111000 0 011111111222221 23333333 235556666666521
Q ss_pred CCCCCCc-ceeEEEEcCCCCCCCCccccCC-----------------------ceEEEEEecCCCCcCCCccEEEee---
Q psy14856 639 HEPVRAP-MSFVVRYRPDEQPSLRPHHDSS-----------------------TYTINIALNQVGVDYEGGGCRFIR--- 691 (734)
Q Consensus 639 ~~~l~~~-~~fvvrY~~~~~~~l~~H~D~S-----------------------~~T~ni~Ln~~~~dfeGGg~~F~~--- 691 (734)
. ... ..+.++. |+... ..+|.|.+ .+|+-|+|.+. .=+-|+|+|..
T Consensus 98 --~-~~~~s~~~~k~-Pg~~~-~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~--t~enG~l~vvPGSH 170 (319)
T 3gja_A 98 --L-LCWRSEFFPKY-QGDEG-TDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHS--TEQNGCLQLMPGTH 170 (319)
T ss_dssp --E-EEEEEEEEEEC-TTCCC-EEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCB--CTTTTCEEECSCC-
T ss_pred --e-EEeeeeEeecC-CCCCC-CCcccCCcccccCCCccccCccccccccccceEEEEEEeccC--CCcCcCEEEEeCCc
Confidence 1 222 2233343 55433 78999953 37888999885 34677777731
Q ss_pred -cc---------------------------------------------c--eeecccceeEEEeCCCcccccCcccCC--
Q psy14856 692 -YN---------------------------------------------C--NVTATRMGWMLMHPGRLTHYHEGLQVT-- 721 (734)
Q Consensus 692 -~~---------------------------------------------~--~v~~~~~G~al~h~g~lth~H~g~~vT-- 721 (734)
.. + ....-++|.+|+|.|++ +|++.+-+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~~~--~H~s~~N~~t 248 (319)
T 3gja_A 171 TSMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSNT--MHASLPHTGS 248 (319)
T ss_dssp --CEECCC------------------------------------------CCBCCBCTTEEEEEETTS--CEEECCCCSC
T ss_pred cCcccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcCCc--cccCCCCCCC
Confidence 00 0 01225689999999997 89998866
Q ss_pred -ceeEEEEE
Q psy14856 722 -QGTRYIMI 729 (734)
Q Consensus 722 -~G~Ryilv 729 (734)
...|..++
T Consensus 249 s~~~R~a~~ 257 (319)
T 3gja_A 249 KTDYRMGFA 257 (319)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEE
Confidence 44576554
No 34
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=93.53 E-value=0.31 Score=50.56 Aligned_cols=156 Identities=15% Similarity=0.096 Sum_probs=72.5
Q ss_pred cEEEEEeecCCCch-HHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcC-CCCCeEEEEEeccce
Q psy14856 33 KFLVITVASNETDG-YKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMD-ITDDMIILVTDSYDV 110 (734)
Q Consensus 33 ~l~vltvat~~~~~-~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~-~~~D~lvl~vDsyDv 110 (734)
++++......-++. ..++.+.+..+|..+..+-..+.+-.+- .....-......|=.+..+- .+-| =||+.|+ |+
T Consensus 35 ~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~s~~~~~rl~~~~l~p~~~~-kvlylD~-D~ 111 (276)
T 3tzt_A 35 IFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFA-KVTDRYPKEMYYRLLAGEFLPENLG-EILYLDP-DM 111 (276)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC--------------CHHHHHHHTHHHHSCTTCC-EEEEECS-SE
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcC-ccccccCHHHHHHHHHHHHcccccC-eEEEEeC-Ce
Confidence 45444444444444 4455566677888888775555432211 01111223333333444432 2234 7899999 99
Q ss_pred eEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCC--CCcccccceeeeeHHHHH---------HHHHhccC
Q psy14856 111 IIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGS--GYRYLNSGGFIGYAKDIK---------ELISNRSI 179 (734)
Q Consensus 111 ~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~--g~R~LNSG~~iG~a~~l~---------~l~~~~~~ 179 (734)
+++.+.++|.+. .++...+-+++..+++.. ...+..... ...|.|||-++=-....| ++++....
T Consensus 112 iv~~di~~L~~~--dl~~~~~aav~d~~~~~~--~~~~~~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~ 187 (276)
T 3tzt_A 112 LVINPLDDLLRT--DISDYILAAASHTGKTDM--ANNVNRIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHM 187 (276)
T ss_dssp EECSCSHHHHTC--CCTTSSEEEEEC----------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC--
T ss_pred eecCCHHHHhhc--CCCCCeEEEEEecccchH--HHHHHHhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccc
Confidence 999999999863 455454433333223321 111111111 138999998876655443 33333222
Q ss_pred CCCCChhHHHHHhhhc
Q psy14856 180 KNEEDDQLYYALLFLD 195 (734)
Q Consensus 180 ~d~~dDQl~~t~i~l~ 195 (734)
+-...||-.+..+|-+
T Consensus 188 ~~~~~DQd~LN~~f~~ 203 (276)
T 3tzt_A 188 NLLLPDQDILNAMYGD 203 (276)
T ss_dssp ------CHHHHHHHGG
T ss_pred cccCCChhHHHHHHhC
Confidence 2235799999888755
No 35
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=89.60 E-value=0.69 Score=48.60 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=51.0
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCccc-C-CCcCcccCCCCCCCCcccccceeeeeHHH---------
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCW-P-DTSLYDKYPAVGSGYRYLNSGGFIGYAKD--------- 169 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cw-P-~~~l~~~yP~~~~g~R~LNSG~~iG~a~~--------- 169 (734)
=||+.|+ |++++.+.++|.+- .++..++-++. .|+ + ........+. ..+..|.|||-++=....
T Consensus 98 kvlyLD~-D~iv~~di~eL~~~--~l~~~~~aav~-d~~~~~~~~~~~~~~~-~~~~~yfNsGv~linl~~~r~~~~~~~ 172 (311)
T 1g9r_A 98 KVLYLDI-DVLVRDSLTPLWDT--DLGDNWLGASI-DLFVERQEGYKQKIGM-ADGEYYFNAGVLLINLKKWRRHDIFKM 172 (311)
T ss_dssp CEEEECS-SEEECSCCHHHHTC--CCTTCSEEEEE-CHHHHTSTTHHHHTTC-CTTSCCEEEEEEEECHHHHTTSCHHHH
T ss_pred EEEEEcC-CeEeccCHHHHhcc--CCCCcEEEEEe-ccchhhhHHHHHhcCC-CCCCceEeeeeeeeeHHHHHhcchHHH
Confidence 4789999 99999999999853 34433333222 232 2 1111111111 123568999987755443
Q ss_pred HHHHHHhccCCCCCChhHHHHHhhhc
Q psy14856 170 IKELISNRSIKNEEDDQLYYALLFLD 195 (734)
Q Consensus 170 l~~l~~~~~~~d~~dDQl~~t~i~l~ 195 (734)
+.++++.....-...||-++..+|-+
T Consensus 173 ~~~~~~~~~~~~~~~DQd~lN~~f~~ 198 (311)
T 1g9r_A 173 SSEWVEQYKDVMQYQDQDILNGLFKG 198 (311)
T ss_dssp HHHHHHHHTTTCSSHHHHHHHHHHTT
T ss_pred HHHHHHhccCcCccCCcCHHHHHHcC
Confidence 33344332223346799999877654
No 36
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=88.86 E-value=1.5 Score=43.48 Aligned_cols=150 Identities=14% Similarity=0.129 Sum_probs=85.5
Q ss_pred ceecCCCCChHHHHHHHHHHHHhCCCCCCC----------CCCcccCCCcc----cccccCeeeeccchHHHHHHHHHHh
Q psy14856 560 DVFWFPIVTEKFCHEFVQIMEAYGQWSDGT----------NNDKRLETGYE----AVPTRDIHMKQVGLAGVWAEFLRKY 625 (734)
Q Consensus 560 ~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~----------~~~~r~~g~~~----~vpt~di~~~~~g~~~~~~~~l~~~ 625 (734)
.++...+|+++.+++|.+++.+--.|..+. ...+|+.+=|- .+.-.+..+...++- .|+..+++.
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp-~~L~~l~~~ 90 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWI-PVLERIRDH 90 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECC-HHHHHHHHH
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCC-HHHHHHHHH
Confidence 577889999999999999998888884321 11123221110 001112333333432 344445555
Q ss_pred hchhhhhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccCC-c-----eEEEEEecCCCCcCCCccEEEe--ec-----
Q psy14856 626 VVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSS-T-----YTINIALNQVGVDYEGGGCRFI--RY----- 692 (734)
Q Consensus 626 v~P~~~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S-~-----~T~ni~Ln~~~~dfeGGg~~F~--~~----- 692 (734)
+. .+++ . ..+...+-.|.++.+ ++.+|.|+. + .-++|+|+. .+.|. ..
T Consensus 91 ~~----~~~g-~-----~~n~~LvN~Y~~G~d-~i~~H~D~~~~~~~~~~IasvSLG~--------~~~f~~~~~~~~~~ 151 (204)
T 3s57_A 91 VS----GVTG-Q-----TFNFVLINRYKDGSD-HICEHRDDERELAPGSPIASVSFGA--------SRDFVFRHKDSRGK 151 (204)
T ss_dssp HH----HHHC-C-----CCSEEEEEEESSTTC-CEEEECCCCTTBCTTCCEEEEEEES--------CEEEEEEEGGGCSS
T ss_pred HH----HHhC-C-----CCceeEEEEECCCCC-cccceecChhhccCCCcEEEEECCC--------ceEEEEEEcCCCcc
Confidence 42 2222 1 356678999998763 699999973 2 335565653 22331 10
Q ss_pred ------cceeecccceeEEEeCCCccc--ccCcccCC--ceeEEEEE
Q psy14856 693 ------NCNVTATRMGWMLMHPGRLTH--YHEGLQVT--QGTRYIMI 729 (734)
Q Consensus 693 ------~~~v~~~~~G~al~h~g~lth--~H~g~~vT--~G~Ryilv 729 (734)
.......+.|..++.+|.... .|+-.++. .|.|.+|.
T Consensus 152 ~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislT 198 (204)
T 3s57_A 152 SPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLT 198 (204)
T ss_dssp SCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEE
T ss_pred ccccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEE
Confidence 111233688999999886543 46655444 28888875
No 37
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=76.81 E-value=12 Score=37.88 Aligned_cols=146 Identities=13% Similarity=0.071 Sum_probs=79.0
Q ss_pred eecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeee------------ecc-chHHHHHHHHHHhhc
Q psy14856 561 VFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHM------------KQV-GLAGVWAEFLRKYVV 627 (734)
Q Consensus 561 Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~------------~~~-g~~~~~~~~l~~~v~ 627 (734)
.|...+++++..++|++++.+--.|...... ..|....+|..-... ... ++- .|+..+.+.+
T Consensus 43 ~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~---~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp-~~l~~l~~~~- 117 (238)
T 2iuw_A 43 CLYPGFVDVKEADWILEQLCQDVPWKQRTGI---REDITYQQPRLTAWYGELPYTYSRITMEPNPHWH-PVLRTLKNRI- 117 (238)
T ss_dssp EEETTSSCHHHHHHHHHHHHHHSCCBCCEEE---SSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCC-HHHHHHHHHH-
T ss_pred EEECCCCCHHHHHHHHHHHHHhCCCccCcee---cCCcccccCCeeEEcCCCccccCCcccCCCCCCC-HHHHHHHHHH-
Confidence 4566789999999999999765667653311 001000111111111 111 111 1222233333
Q ss_pred hhhhhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccCCc------eEEEEEecCCCCcCCCccEEEe--e--------
Q psy14856 628 PLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSST------YTINIALNQVGVDYEGGGCRFI--R-------- 691 (734)
Q Consensus 628 P~~~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~S~------~T~ni~Ln~~~~dfeGGg~~F~--~-------- 691 (734)
+.+++ . ..+...+-.|.++.+ .+.+|.|+.. .-++|+|+. .+.|. .
T Consensus 118 ---~~~~g----~--~~n~~LvN~Y~~G~d-~i~~H~D~~~~~~~~~~IaslSLG~--------~~~f~f~~~~~~~~~~ 179 (238)
T 2iuw_A 118 ---EENTG----H--TFNSLLCNLYRNEKD-SVDWHSDDEPSLGRCPIIASLSFGA--------TRTFEMRKKPPPEENG 179 (238)
T ss_dssp ---HHHHS----C--CCCEEEEEEECSTTC-CEEEECCCCGGGCSSCCEEEEEEES--------CEEEEEEECCC-----
T ss_pred ---HHHhC----C--CCCEEEEEEECCCCC-ceeCCcCChhhcCCCCcEEEEECCC--------CEEEEEeccCCccccC
Confidence 22222 1 356678899987753 6999999742 345555643 22221 0
Q ss_pred ----ccceeecccceeEEEeCCCcc--cccCcccCC--ceeEEEEE
Q psy14856 692 ----YNCNVTATRMGWMLMHPGRLT--HYHEGLQVT--QGTRYIMI 729 (734)
Q Consensus 692 ----~~~~v~~~~~G~al~h~g~lt--h~H~g~~vT--~G~Ryilv 729 (734)
........+.|..++..|... +.|+-.++. .|.|.+|.
T Consensus 180 ~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLT 225 (238)
T 2iuw_A 180 DYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLT 225 (238)
T ss_dssp ---CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEE
T ss_pred cccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEE
Confidence 011123367899998888642 358877763 78888875
No 38
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=74.46 E-value=8.5 Score=42.85 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=72.5
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccC-cceEEEEeCCCCCcHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTM-FKNVKYIAHNSTVNSKEARNL 369 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~-y~~V~ii~~~~~~g~a~arN~ 369 (734)
|++++ |+-+ .|.|...|+.+.++.- ++|.+.+ -+..+.+++++.+.+.. -..++++..++.+|-+.|-.+
T Consensus 31 pK~l~--pv~g-kp~i~~~l~~~~~~g~--~~i~vv~----~~~~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~ 101 (501)
T 3st8_A 31 PKVLH--TLAG-RSMLSHVLHAIAKLAP--QRLIVVL----GHDHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLC 101 (501)
T ss_dssp CGGGC--EETT-EEHHHHHHHHHHHHCC--SEEEEEE----CTTHHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHH
T ss_pred CHHHe--EECC-hhHHHHHHHHHHhCCC--CEEEEEe----CCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHH
Confidence 55543 4455 3799999999998864 3454444 23456677776553322 236788888888998888888
Q ss_pred HHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 370 AVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 370 al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
|++...+...+.++++.+|..|.++++++.|++.
T Consensus 102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~ 135 (501)
T 3st8_A 102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIAT 135 (501)
T ss_dssp HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHhccccccceeeecCcceeecHHHHHHHHHH
Confidence 8876544445678888888877679999999863
No 39
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=72.98 E-value=6.8 Score=39.04 Aligned_cols=155 Identities=13% Similarity=0.140 Sum_probs=80.9
Q ss_pred CCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCC-ccccccc-----------------Cee-eeccchH
Q psy14856 555 NQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETG-YEAVPTR-----------------DIH-MKQVGLA 615 (734)
Q Consensus 555 ~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~-~~~vpt~-----------------di~-~~~~g~~ 615 (734)
++.+|++.+.|=|-.+.-++|+++++... |..+-.++. ..|| ..+|..+ ++. ....+..
T Consensus 3 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~-~~~p~~~~~-~pgg~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~ 80 (211)
T 3i3q_A 3 EPLAAGAVILRRFAFNAAEQLIRDINDVA-SQSPFRQMV-TPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWP 80 (211)
T ss_dssp CCCBTTBEEETTTTTTTHHHHHHHHHHHH-HHSCCBCCB-CTTSCBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCC
T ss_pred eecCCCCEEECCcChHHHHHHHHHHHHHH-hcCCCceeE-cCCCCcCchhhcccccceeecCCCCcCcCCCccCCCCCCC
Confidence 45577888887765567788998888653 232211222 1222 2222211 011 1111221
Q ss_pred --HHHHHHHHHhhchhhhhhhcCCCCCCCCCcceeEEEEcCCCCCCCCccccC-C-c---eEEEEEecCCCCcCCCccEE
Q psy14856 616 --GVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDS-S-T---YTINIALNQVGVDYEGGGCR 688 (734)
Q Consensus 616 --~~~~~~l~~~v~P~~~~~f~~~~~~~l~~~~~fvvrY~~~~~~~l~~H~D~-S-~---~T~ni~Ln~~~~dfeGGg~~ 688 (734)
..|+..+.+.+.-. .-|+.+ ..+...+-.|+++. ++.+|.|. . . --++|+|+. .+.
T Consensus 81 ~~P~~L~~l~~~~~~~--~g~~~~-----~pn~~LvN~Y~~G~--~i~~H~D~~e~~~~~pI~svSLG~--------~~~ 143 (211)
T 3i3q_A 81 AMPQSFHNLCQRAATA--AGYPDF-----QPDACLINRYAPGA--KLSLHQDKDEPDLRAPIVSVSLGL--------PAI 143 (211)
T ss_dssp CCCHHHHHHHHHHHHH--TTCTTC-----CCCEEEEEEECTTC--CEEEECCCCCSCTTSCEEEEEEES--------CEE
T ss_pred chHHHHHHHHHHHHHh--cCCCCc-----CCCEEEEEEEcCCC--CcccccCCCccccCCCEEEEECCC--------CeE
Confidence 12444444443211 112211 34667889999887 79999994 2 1 234555553 233
Q ss_pred Ee--ec----cceeecccceeEEEeCC--CcccccCcccCCc-------eeEEEEE
Q psy14856 689 FI--RY----NCNVTATRMGWMLMHPG--RLTHYHEGLQVTQ-------GTRYIMI 729 (734)
Q Consensus 689 F~--~~----~~~v~~~~~G~al~h~g--~lth~H~g~~vT~-------G~Ryilv 729 (734)
|. .. .......+.|..++.+| +. ++|+-.++.. |.|.+|.
T Consensus 144 f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLT 198 (211)
T 3i3q_A 144 FQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLT 198 (211)
T ss_dssp EEECCSSTTSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEE
T ss_pred EEEecccCCCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEE
Confidence 31 10 11123367899888877 43 6788888776 4588775
No 40
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=72.32 E-value=13 Score=35.07 Aligned_cols=90 Identities=9% Similarity=0.022 Sum_probs=53.1
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~D 380 (734)
..+.|...++++.+.. -+++. |..+. ..+.+++++.+. .++++..+ ...|.+.+-..|++.+. ...|
T Consensus 30 g~pll~~~l~~l~~~~--~~~i~--vv~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~i~~al~~~~-~~~~ 97 (197)
T 2wee_A 30 DTTVLGATLDVARQAG--FDQLI--LTLGG--AASAVRAAMALD-----GTDVVVVEDVERGCAASLRVALARVH-PRAT 97 (197)
T ss_dssp TEEHHHHHHHHHHHTT--CSEEE--EEECT--THHHHHHHSCCT-----TSEEEECC----CCHHHHHHHHTTSC-TTEE
T ss_pred CccHHHHHHHHHHhcC--CCcEE--EEeCC--CHHHHHHHhccC-----CCEEEECCCcccCHHHHHHHHHHHhc-ccCC
Confidence 4689999999998875 23443 33221 133444443321 35555432 22344444445554331 2579
Q ss_pred EEEEECCCccCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~ 403 (734)
+++++++|.-+-++++++.|++.
T Consensus 98 ~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 98 GIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEETTCTTCCHHHHHHHHHH
T ss_pred eEEEEeCCcCCCCHHHHHHHHhh
Confidence 99999999954349999999985
No 41
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=72.05 E-value=21 Score=34.68 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=57.4
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhc---
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHK--- 377 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~--- 377 (734)
+..|.|...++++.+..... ++ +|..+.+. +.+++ +.+.+ ...+.++ .+..+.+.+-..|++.+.+.
T Consensus 32 ~gkpli~~~l~~l~~~~~~~-~i--vvv~~~~~--~~~~~-~~~~~--~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~ 101 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAVD-LT--VVVVSPED--TFADK-VQTAF--PQVRVWK--NGGQTRAETVRNGVAKLLETGLA 101 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTCC-EE--EEECCTTC--STHHH-HHHHC--TTSEEEC--CCCSSHHHHHHHHHHHHHHHSSS
T ss_pred CCeEHHHHHHHHHHcCCCCC-eE--EEEECccH--HHHHH-HHhcC--CCceEEE--cCCCcHHHHHHHHHHHHhhhccC
Confidence 35799999999999875432 33 34432222 12334 33332 1345555 23455556666666654321
Q ss_pred -CccEEEEECCCccCCChHHHHHHHHc
Q psy14856 378 -GVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 378 -~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
.+|+++++++|.-+-++++++.|++.
T Consensus 102 ~~~~~vlv~~~D~p~~~~~~i~~l~~~ 128 (231)
T 1vgw_A 102 AETDNILVHDAARCCLPSEALARLIEQ 128 (231)
T ss_dssp CTTSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcccCCHHHHHHHHHH
Confidence 57999999999865559999999974
No 42
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=71.88 E-value=14 Score=34.72 Aligned_cols=90 Identities=9% Similarity=-0.049 Sum_probs=55.5
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~D 380 (734)
..+.|...++++.+.. -+++. |..+ ...+.+++++.+. .++++..+ ...|...+-..|++.+. ...|
T Consensus 30 g~pli~~~l~~l~~~~--~~~i~--vv~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~i~~al~~~~-~~~~ 97 (199)
T 2waw_A 30 DTTLLGATLAMARRCP--FDQLI--VTLG--GAADEVLEKVELD-----GLDIVLVDDAGLGCSSSLKSALTWVD-PTAE 97 (199)
T ss_dssp TEEHHHHHHHHHHTSS--CSEEE--EEEC--TTHHHHHHHSCCT-----TSEEEECCCCCTTCCCHHHHHHHTSC-TTCS
T ss_pred ccCHHHHHHHHHHhCC--CCcEE--EEeC--CCHHHHHHHhccC-----CCEEEECCCcccCHHHHHHHHHHhhh-ccCC
Confidence 4689999999999875 23443 3322 1123444444322 34555432 23344445555665542 2579
Q ss_pred EEEEECCCccCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~ 403 (734)
+++++++|.-+-++++++.|++.
T Consensus 98 ~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 98 GIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp EEEEEETTCTTCCHHHHHHHHHH
T ss_pred eEEEEeCCcccCCHHHHHHHHhh
Confidence 99999999976559999999975
No 43
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=66.33 E-value=36 Score=33.24 Aligned_cols=91 Identities=14% Similarity=0.138 Sum_probs=60.2
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~ 379 (734)
+..+.|+..++.+.+. +++|..+ ..+.++.+.+.. .++++... ...|...+-..|++.+ +
T Consensus 24 ~G~pli~~~~~~l~~~-------~vvvv~~---~~~~~~~~~~~~-----~~~~v~d~~~~~G~~~si~~gl~~~----~ 84 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-------QTVFVCR---DEKQAEKLSSRY-----EAEFIWDLHKGVGSIAGIHAALRHF----G 84 (208)
T ss_dssp TTEEHHHHHHHHHTTS-------EEEEECS---SHHHHHHHHTTS-----CSCEECCTTCCCSHHHHHHHHHHHH----S
T ss_pred CCeeHHHHHHHHhcCC-------CEEEEEC---CHHHHHHHHHhc-----CCeEEecCCCCCChHHHHHHHHHHc----C
Confidence 4579999999999876 3445442 134455444322 34555432 3345556666666654 7
Q ss_pred cEEEEECCCccCCChHHHHHHHHc----CCceeeec
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPL 411 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~ 411 (734)
|++ ++++|.=+-++++++.|++. +.+++.|.
T Consensus 85 ~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 85 SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 999 99999955459999999974 67788777
No 44
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=66.01 E-value=15 Score=39.74 Aligned_cols=88 Identities=10% Similarity=0.197 Sum_probs=57.3
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|+..++++.+.. -+++. |..+.+ .+.+++++.+. .++++..++..|.+.+-..|++.. ...|+
T Consensus 35 g~pli~~~l~~l~~~~--~~~i~--vv~~~~--~~~i~~~~~~~-----~~~~v~~~~~~g~~~~i~~~~~~~--~~~~~ 101 (459)
T 4fce_A 35 GKPMVQHVIDAAMKLG--AQHVH--LVYGHG--GELLKKTLADP-----SLNWVLQAEQLGTGHAMQQAAPHF--ADDED 101 (459)
T ss_dssp TEEHHHHHHHHHHHHT--CSCEE--EEESSC--HHHHHHHC----------CEEECSSCCCHHHHHHHHGGGS--CTTSE
T ss_pred CeeHHHHHHHHHHhCC--CCcEE--EEeCCC--HHHHHHHhccC-----CcEEEeCCCCCCcHHHHHHHHHhc--CCCCc
Confidence 4699999999999876 23443 333222 35555555432 456666666677666666666543 24699
Q ss_pred EEEECCCc-cCCChHHHHHHHHc
Q psy14856 382 YFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~-~L~np~tL~~LI~~ 403 (734)
++++++|. +++ ++.++.|++.
T Consensus 102 ~lv~~~D~P~i~-~~~i~~l~~~ 123 (459)
T 4fce_A 102 ILMLYGDVPLIS-VDTLQRLLAA 123 (459)
T ss_dssp EEEEETTCTTCC-HHHHHHHHHH
T ss_pred EEEEeCCcccCC-HHHHHHHHHH
Confidence 99999999 555 9999999985
No 45
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=65.25 E-value=19 Score=38.90 Aligned_cols=89 Identities=13% Similarity=0.206 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|...++++.+.. -+++.+.+ + ...+.+++++.+. .++++..++..|.+.+-..|++.. ...|++
T Consensus 33 kpli~~~l~~l~~~~--~~~iivv~-~---~~~~~i~~~~~~~-----~~~~v~~~~~~g~~~~~~~~~~~~--~~~~~v 99 (456)
T 2v0h_A 33 KPMVKHVIDTAHQLG--SENIHLIY-G---HGGDLMRTHLANE-----QVNWVLQTEQLGTAHAVQQAAPFF--KDNENI 99 (456)
T ss_dssp EEHHHHHHHHHHHTT--CSCEEEEE-C---TTHHHHHHHTTTC-----CCEEEECSCCCCHHHHHHHHGGGC--CTTSEE
T ss_pred ccHHHHHHHHHHhCC--CCcEEEEe-C---CCHHHHHHHhhcC-----CcEEEeCCCCCCcHHHHHHHHHhc--CCCCeE
Confidence 599999999999875 23443333 2 2234455544322 466666666666665555555443 137999
Q ss_pred EEECCCccCCChHHHHHHHHcC
Q psy14856 383 FYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~~n 404 (734)
+++++|.-+-.+..++.|++.-
T Consensus 100 lv~~~D~P~i~~~~i~~l~~~~ 121 (456)
T 2v0h_A 100 VVLYGDAPLITKETLEKLIEAK 121 (456)
T ss_dssp EEEETTCTTCCHHHHHHHHHHC
T ss_pred EEEcCCcceeCHHHHHHHHHHH
Confidence 9999999543499999999853
No 46
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=64.58 E-value=51 Score=33.55 Aligned_cols=84 Identities=10% Similarity=0.118 Sum_probs=49.3
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHc-c-cCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC----C-Cc
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIAN-L-NYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS----T-VN 362 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~-L-dYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~----~-~g 362 (734)
.|.|.++.|.|.. ++=..-|.+|.+ | .=|. ++-+|......+.+.+.+++++.+-.|..+..-.++. . ..
T Consensus 2 ~p~I~vVTPTy~R-~~Q~a~LtRLa~TL~~Vp~--l~WIVVEd~~~~~~~v~~lL~~sgl~y~HL~~~~~~~~~~~~~pr 78 (246)
T 2d0j_A 2 LPTIYAITPTYSR-PVQKAELTRLANTFRQVAQ--LHWILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPR 78 (246)
T ss_dssp CCCEEEEEEECCS-TTHHHHHHHHHHHHTTSTT--EEEEEEESSSSCCHHHHHHHHHSCSCEEEEECCCCCC----CCCC
T ss_pred CCEEEEEeCCCCc-cchhHHHHHHHHHHhcCCc--eEEEEEcCCCCCCHHHHHHHHHcCCceEEEecCCccccCCCCCcc
Confidence 5899999999987 333334444432 2 2244 6544444334455668888988887665443221110 0 12
Q ss_pred HHHHHHHHHHhhhh
Q psy14856 363 SKEARNLAVENSLH 376 (734)
Q Consensus 363 ~a~arN~al~~a~~ 376 (734)
...-||.||..-++
T Consensus 79 g~~qRn~AL~~Ir~ 92 (246)
T 2d0j_A 79 ATEQRNAGLAWLRQ 92 (246)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 24779999987765
No 47
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=64.40 E-value=12 Score=39.19 Aligned_cols=98 Identities=17% Similarity=0.264 Sum_probs=58.6
Q ss_pred CCcEEEEEEecCC-hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCc---HHH
Q psy14856 290 FPSVLISVFIDKP-TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN---SKE 365 (734)
Q Consensus 290 ~P~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g---~a~ 365 (734)
..+|.|.+++--. ..|++.|++|-++-=-|..+++.+|-. |....+ -. + +.+ .-..++++.-.+..+ ..-
T Consensus 57 n~tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFT--D~~~~v-P~-v-~l~-~~r~~~V~~v~~~~~Wqd~sm 130 (298)
T 3ioh_A 57 NTTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFT--DQPAAV-PR-V-TLG-TGRQLSVLEVRAYKRWQDVSM 130 (298)
T ss_dssp TCEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEE--SCGGGS-CC-C-CCC-TTEEEEEEECCCCSSHHHHHH
T ss_pred CCcEEEEEEEeCcHHHHHHHHHHhHHHhccCCceEEEEEEe--CChhhC-Cc-c-ccC-CCCeEEEEEeccccCCccccH
Confidence 3678888888322 569999999999988888888866654 221110 00 0 001 124677775543332 111
Q ss_pred HHHH----HHHhhhhcCccEEEEECCCccCCC
Q psy14856 366 ARNL----AVENSLHKGVDFYFYVDSDSHLDN 393 (734)
Q Consensus 366 arN~----al~~a~~~~~DYlf~vDAD~~L~n 393 (734)
.|=. .++.......||+|++|+|..+.+
T Consensus 131 ~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~ 162 (298)
T 3ioh_A 131 RRMEMISDFCERRFLSEVDYLVCVDVDMEFRD 162 (298)
T ss_dssp HHHHHHHHHHHHTHHHHCSEEEEEESSEEECS
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEecCCCeecc
Confidence 1222 222222367999999999999974
No 48
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=64.13 E-value=45 Score=33.06 Aligned_cols=103 Identities=11% Similarity=0.091 Sum_probs=61.3
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHH
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLA 370 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~a 370 (734)
|+.++-+ +..|.|...++++.+.... ++|.+.+ + .+ ..+.+++.++++... ..+.++.+.. +...+-..|
T Consensus 23 pK~l~~l---~Gkpll~~~l~~~~~~~~~-~~ivvv~-~-~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~sv~~a 92 (246)
T 3f1c_A 23 PKQFLPL---NGKPIIVHTVEKFILNTRF-DKILISS-P-KE-WMNHAEDNIKKYISD-DRIVVIEGGE--DRNETIMNG 92 (246)
T ss_dssp CGGGSEE---TTEEHHHHHHHHHHTCTTC-SEEEEEE-C-GG-GHHHHHHHHHHHCCC-TTEEEEECCS--SHHHHHHHH
T ss_pred CCeEEEE---CCeeHHHHHHHHHHcCCCC-CEEEEEe-C-HH-HHHHHHHHHHHhCCC-CCEEEECCCC--chHHHHHHH
Confidence 4544433 3459999999999887543 3443323 2 22 233445555544321 2466665432 334444556
Q ss_pred HHhhhh----cCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 371 VENSLH----KGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 371 l~~a~~----~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
++.+.+ ...|+++++|+|.-+-.+++|+.|++.
T Consensus 93 l~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~ 129 (246)
T 3f1c_A 93 IRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDA 129 (246)
T ss_dssp HHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHH
Confidence 655533 247999999999844459999999973
No 49
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=61.13 E-value=53 Score=32.70 Aligned_cols=87 Identities=10% Similarity=0.194 Sum_probs=51.7
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-C-CCcHHHHHHHHHHhhhh-cC
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-S-TVNSKEARNLAVENSLH-KG 378 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~-~~g~a~arN~al~~a~~-~~ 378 (734)
..|.|...++++.+... ++|.+ ..+ . +.+.+++++. .++++... + ..|.+ +-.+...+.+ ..
T Consensus 26 gkpli~~~l~~l~~~~~--~~ivv--v~~--~--~~i~~~~~~~-----~~~~~~~~~~~~~g~~--~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SRVII--ATD--N--ENVADVAKSF-----GAEVCMTSVNHNSGTE--RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SEEEE--EES--C--HHHHHHHHHT-----TCEEEECCCSSCCHHH--HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ceEEE--ECC--c--HHHHHHHHhc-----CCEEEECCccccCChH--HHHHHHHHhccCC
Confidence 46999999999998765 45533 322 1 2355555443 34455432 2 22332 2222222222 35
Q ss_pred ccEEEEECCCccCCChHHHHHHHHc
Q psy14856 379 VDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 379 ~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
.|+++++++|.-+-++++++.|++.
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~ 115 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADN 115 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHH
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHH
Confidence 7999999999954449999999863
No 50
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=60.66 E-value=12 Score=36.97 Aligned_cols=75 Identities=19% Similarity=0.245 Sum_probs=55.6
Q ss_pred ceeEEEEcCCCCCCCCccccCCc--eEEEEEecCCCCcCCCccEEEeeccceeecccceeEEEeCCCcccccCcccCCce
Q psy14856 646 MSFVVRYRPDEQPSLRPHHDSST--YTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQG 723 (734)
Q Consensus 646 ~~fvvrY~~~~~~~l~~H~D~S~--~T~ni~Ln~~~~dfeGGg~~F~~~~~~v~~~~~G~al~h~g~lth~H~g~~vT~G 723 (734)
.+++.+-.|+. ++.+|+|.+. +++-+.|-.+. ++|+|. .+-..+.-+.|.+++|-.+ ..|++---+.+
T Consensus 103 ~a~fs~L~pG~--~I~pH~g~~n~~lR~HL~L~~p~-----~~~~i~-V~~~~~~w~eGe~~~fDds--~~Hev~N~~d~ 172 (197)
T 3rcq_A 103 QIKYSIMHPGT--HVWPHTGPTNCRLRMHLGLVIPK-----EGCKIR-CANETKTWEEGKVLIFDDS--FEHEVWQDASS 172 (197)
T ss_dssp EEEEEEECTTE--EEEEECCSCTTEEEEEEEEECCS-----SSEEEE-ETTEEECCCBTCEEEECTT--SCEEEEECSSS
T ss_pred eEEEEEeCCCC--CcCCeeCCCCCeEEEEEEEEeCC-----CCcEEE-ECCEEEEeeCCcEEEEcCC--eEEEEEECCCC
Confidence 56777777775 5999999765 44555554432 357663 3334556899999999997 48999999999
Q ss_pred eEEEEEe
Q psy14856 724 TRYIMIS 730 (734)
Q Consensus 724 ~Ryilv~ 730 (734)
.|++|+.
T Consensus 173 ~RvvL~~ 179 (197)
T 3rcq_A 173 FRLIFIV 179 (197)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 9999975
No 51
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=60.05 E-value=21 Score=38.87 Aligned_cols=87 Identities=13% Similarity=0.210 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFY 382 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYl 382 (734)
.|.|+..++++.+.. -+++.+ ..+ ...+.+++++.+ .++++..++..|-+.+-..|++... ...|++
T Consensus 39 kpli~~~l~~l~~~g--~~~iiv--v~~--~~~~~i~~~~~~------~i~~v~~~~~~G~~~sl~~a~~~~~-~~~~~v 105 (468)
T 1hm9_A 39 ISMLEHVFRSVGAIQ--PEKTVT--VVG--HKAELVEEVLAG------QTEFVTQSEQLGTGHAVMMTEPILE-GLSGHT 105 (468)
T ss_dssp EEHHHHHHHHHHTTC--CSEEEE--EEC--TTHHHHHHSSSS------SSEEEECSSCCCHHHHHHTTHHHHT-TCCSEE
T ss_pred ccHHHHHHHHHHhcC--CCCEEE--EEC--CCHHHHHHHhCC------CcEEEeCCccCChHHHHHHHHHHhc-cCCCeE
Confidence 599999999998874 344433 322 123444433321 4566666666677766666666542 236999
Q ss_pred EEECCCccCCChHHHHHHHH
Q psy14856 383 FYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 383 f~vDAD~~L~np~tL~~LI~ 402 (734)
+++++|.-+-.+..++.|++
T Consensus 106 lv~~~D~P~i~~~~i~~l~~ 125 (468)
T 1hm9_A 106 LVIAGDTPLITGESLKNLID 125 (468)
T ss_dssp EEEETTCTTCCHHHHHHHHH
T ss_pred EEEeCCccccCHHHHHHHHH
Confidence 99999996434999999986
No 52
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=58.64 E-value=75 Score=32.89 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=46.2
Q ss_pred CCCCcEEEEEEecCChhHHHHHHHHHHc-c-cCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC-----
Q psy14856 288 DQFPSVLISVFIDKPTAFLEEFLNKIAN-L-NYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST----- 360 (734)
Q Consensus 288 ~~~P~V~I~I~i~n~~~~L~~fL~sL~~-L-dYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~----- 360 (734)
...|.|.++.|.|... +=..-|.+|.+ | .=| .++-+|..........+.+++++.+-.|..+..-.+..-
T Consensus 18 ~~~p~IivVTPTy~R~-~Q~a~LtRLa~TL~~Vp--~L~WIVVEd~~~~t~~va~lL~rsGl~y~HL~~~~p~~~~~~~~ 94 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARL-VQKAELVRLSQTLSLVP--RLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREG 94 (281)
T ss_dssp ---CEEEEEEEECCST-THHHHHHHHHHHHTTSS--SEEEEEEESSSSCCHHHHHHHHHHCSEEEEEECCCC--------
T ss_pred CCCCeEEEEeCCCCCc-chhHHHHHHHHHHhcCC--ceEEEEEcCCCCCCHHHHHHHHHcCCceEEeccCCCcccccccc
Confidence 4679999999999873 32333344332 2 124 365444443333455677888888876655433211110
Q ss_pred ------CcHHHHHHHHHHhhh
Q psy14856 361 ------VNSKEARNLAVENSL 375 (734)
Q Consensus 361 ------~g~a~arN~al~~a~ 375 (734)
.-...-||.||+.-+
T Consensus 95 dp~w~~~rg~~QRN~AL~~Ir 115 (281)
T 3cu0_A 95 EPGWVHPRGVEQRNKALDWLR 115 (281)
T ss_dssp ---CCCCCSHHHHHHHHHHHT
T ss_pred ccccccchhHHHHHHHHHHHH
Confidence 012456999998866
No 53
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=58.39 E-value=8.8 Score=39.38 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCccccCCceEEEEEecCCCCcCCCccEEEeeccc----eeecccceeEEEeCCCcccccCcccCCc---------eeEE
Q psy14856 660 LRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNC----NVTATRMGWMLMHPGRLTHYHEGLQVTQ---------GTRY 726 (734)
Q Consensus 660 l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~~----~v~~~~~G~al~h~g~lth~H~g~~vT~---------G~Ry 726 (734)
=+.|+|+..|++...++..+ =+||+++-...+- ...-..+|.+++.--+- -+|++.||.+ |.|-
T Consensus 163 EGiHrDG~d~v~v~lv~R~N--i~GGet~I~~~~~~~~~~~~l~~p~d~llv~D~~-~~H~vTpI~~~~~~~~~~~g~RD 239 (254)
T 3pl0_A 163 EGAHRDGVDFVAVVFIGRQG--VRGGETRVFDAAGPQGVRFTLEQPWTVLLLDDQQ-VIHESTPLLPLDPADPAVPAHRD 239 (254)
T ss_dssp TCSBCCSSSEEEEEEEEEES--EEECCEEEEETTSSEEEEECCCSTTCEEEEETTT-EEEEECCEEESCTTCTTSCCEEE
T ss_pred cccccCCCCEEEEEEecCCc--cccceEEEEcCCCCccceeEecCCCcEEEEeCCc-ccCCCCccccCCCCCCCCceEEE
Confidence 45799999999999998743 4699998865421 11225788888886542 3899999874 8899
Q ss_pred EEEeee
Q psy14856 727 IMISFV 732 (734)
Q Consensus 727 ilv~F~ 732 (734)
+||...
T Consensus 240 vlVvtf 245 (254)
T 3pl0_A 240 TLVLTY 245 (254)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998643
No 54
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=56.28 E-value=89 Score=31.90 Aligned_cols=98 Identities=13% Similarity=0.232 Sum_probs=52.8
Q ss_pred CCcEEEEEEecCChh---HHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC--------
Q psy14856 290 FPSVLISVFIDKPTA---FLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-------- 358 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~---~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-------- 358 (734)
.|.|.++.|.|...- .|-+.-+.|... | .++-+|..........+.+++++.+-.|..+..-.++
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~V--p--~L~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~p~~~~~~~~~ 77 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLHV--P--NLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDA 77 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTTS--S--SEEEEEEESSSSCCHHHHHHHHHHCCEEEEEECCCCHHHHCC---
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhccC--C--ceEEEEEeCCCCCCHHHHHHHHHcCCceEEeecCCCccccccccc
Confidence 589999999998732 233333334222 4 4654444422333455778888887665443332110
Q ss_pred --C-CCcHHHHHHHHHHhhhhc------CccEEEEECCCccC
Q psy14856 359 --S-TVNSKEARNLAVENSLHK------GVDFYFYVDSDSHL 391 (734)
Q Consensus 359 --~-~~g~a~arN~al~~a~~~------~~DYlf~vDAD~~L 391 (734)
. ......-||.||..-++. ..-.+.|.|-|...
T Consensus 78 ~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY 119 (253)
T 1v84_A 78 RDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTY 119 (253)
T ss_dssp ----CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEE
T ss_pred cCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcc
Confidence 0 012346799999876641 12344555555544
No 55
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=56.27 E-value=17 Score=38.80 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=56.9
Q ss_pred ceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc--------
Q psy14856 646 MSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT-------- 712 (734)
Q Consensus 646 ~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt-------- 712 (734)
...+.+|-|- ..-.+++|+|.+.+|+... + + -||+.....+ =.-+.|.+|..||.-|.+-
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d---~--v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~ 283 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVSALTFILH--N---M--VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKY 283 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE--C---S--CCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred eeeeeecCCCCCcccccCcCCccCCCeEEEEEE--c---C--CCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEe
Confidence 4567888653 3456889999999998764 3 2 4667765422 1124588999998877421
Q ss_pred --cccCcccCCceeEEEEEeeeCC
Q psy14856 713 --HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 --h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-.|++..-....||-+..|+.|
T Consensus 284 kS~~HRVv~~~~~~R~Sia~F~~P 307 (356)
T 1gp6_A 284 KSILHRGLVNKEKVRISWAVFCEP 307 (356)
T ss_dssp CCCCEEECCCSSCCEEEEEEEEEC
T ss_pred eccCceecCCCCCCEEEEEEeecC
Confidence 1588876666789999999987
No 56
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=55.66 E-value=58 Score=31.47 Aligned_cols=81 Identities=7% Similarity=0.157 Sum_probs=49.1
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeC-C-CCCcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAH-N-STVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~-~-~~~g~a~arN~al~~a~~~~~ 379 (734)
..|.|...++++.+. . +++. |..+ . +.+.+++++ + ++++.. + ...|.+.+. .|++ ....
T Consensus 26 g~pli~~~l~~~~~~--~-~~i~--v~~~--~--~~i~~~~~~----~--~~~~~~~~~~~~g~~~~~-~~~~---~~~~ 86 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT--G-ERVI--LATD--S--ERVKEVVED----L--CEVFLTPSDLPSGSDRVL-YVVR---DLDV 86 (234)
T ss_dssp TEEHHHHHHHHHHTT--T-SCEE--EEES--C--HHHHHHHTT----T--SEEEECCTTCCSHHHHHH-HHHT---TCCC
T ss_pred CEEHHHHHHHHHHHh--C-CEEE--EECC--h--HHHHHHHHh----c--eEEEECCcccccchHHHH-HHHH---hCCC
Confidence 359999999999987 2 3443 3322 2 344555432 2 344432 2 233433333 2332 2467
Q ss_pred cEEEEECCCc-cCCChHHHHHHHH
Q psy14856 380 DFYFYVDSDS-HLDNPDVLKYLVN 402 (734)
Q Consensus 380 DYlf~vDAD~-~L~np~tL~~LI~ 402 (734)
|+++++++|. +++ +..++.|++
T Consensus 87 ~~vlv~~~D~P~~~-~~~i~~l~~ 109 (234)
T 2y6p_A 87 DLIINYQGDEPFVY-EEDIKLIFR 109 (234)
T ss_dssp SEEEECCTTCCCCC-HHHHHHHHH
T ss_pred CEEEEecCCcCcCC-HHHHHHHHH
Confidence 9999999999 665 999999996
No 57
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=55.17 E-value=24 Score=36.65 Aligned_cols=97 Identities=18% Similarity=0.266 Sum_probs=55.2
Q ss_pred CcEEEEEEecCC-h-hHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcH---HH
Q psy14856 291 PSVLISVFIDKP-T-AFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNS---KE 365 (734)
Q Consensus 291 P~V~I~I~i~n~-~-~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~---a~ 365 (734)
-+|.|.+++=-. . .|++.|++|-++-=-|.-+++.+|-. |....+- . + +.+. -.+++++.-.+...- .-
T Consensus 48 ~tIGl~vfa~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFT--D~~~~~p-~-v-~l~~-~r~~~V~~i~~~~~W~d~sm 121 (289)
T 1o7q_A 48 ITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMV--DDVSRMP-L-I-ELGP-LRSFKVFKIKPEKRWQDISM 121 (289)
T ss_dssp CCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEE--SCGGGCC-C-C-CCCT-TEEEEEEECCCCSSHHHHHH
T ss_pred CeEEEEEEEecccHHHHHHHHHHHHHHhccCCCeEEEEEEe--CChhhCC-c-c-ccCC-CCeEEEEEeccccCCchhHH
Confidence 468888887444 4 89999999999977777788766654 2211100 0 0 0111 134666653322221 11
Q ss_pred HHHHHHHh----hhhcCccEEEEECCCccCCC
Q psy14856 366 ARNLAVEN----SLHKGVDFYFYVDSDSHLDN 393 (734)
Q Consensus 366 arN~al~~----a~~~~~DYlf~vDAD~~L~n 393 (734)
.|=..+.. -....+||+|++|+|..+.+
T Consensus 122 ~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~ 153 (289)
T 1o7q_A 122 MRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQD 153 (289)
T ss_dssp HHHHHHHHHHHHTHHHHCSEEEEECSSEEECS
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEeeCCcEeec
Confidence 22222222 11257999999999999874
No 58
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=55.05 E-value=74 Score=30.72 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=52.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-----CCcHHHHHHHHHHhhhh
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-----TVNSKEARNLAVENSLH 376 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-----~~g~a~arN~al~~a~~ 376 (734)
..|.|...++++.+...- ++| +|..+ . +.+.+++++.+ ++++..++ ..+...+-..|++.+ .
T Consensus 28 gkpll~~~l~~~~~~~~~-~~i--vvv~~---~-~~i~~~~~~~~-----~~~~~~~~~~~~~~~g~~~sv~~~l~~~-~ 94 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DRI--IVSTD---G-GLIAEEAKNFG-----VEVVLRPAELASDTASSISGVIHALETI-G 94 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SEE--EEEES---C-HHHHHHHHHTT-----CEEEECCC------CHHHHHHHHHHHHH-T
T ss_pred CcCHHHHHHHHHHhCCCC-CEE--EEECC---C-HHHHHHHHHcC-----CEEEeCchHHcCCCCChHHHHHHHHHHh-C
Confidence 468999999999876432 344 33332 1 33455554432 33333221 223344444455443 2
Q ss_pred cCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
..+|+++++++|.-+-++++++.|++.
T Consensus 95 ~~~d~vlv~~~D~P~~~~~~i~~l~~~ 121 (228)
T 1ezi_A 95 SNSGTVTLLQPTSPLRTGAHIREAFSL 121 (228)
T ss_dssp CCSEEEEECCTTCTTCCHHHHHHHHTT
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHH
Confidence 357999999999965459999999974
No 59
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=55.04 E-value=30 Score=33.03 Aligned_cols=92 Identities=10% Similarity=0.069 Sum_probs=54.7
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-CCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-TVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a~arN~al~~a~~~~~D 380 (734)
..+.|...++++.+. ++ +|..+.+ .+.+++++. ..+ ++..+. ..|...+-..|++.+. ..|
T Consensus 27 g~pll~~~l~~l~~~-----~i--vvv~~~~--~~~~~~~~~------~~~-~v~~~~~~~G~~~si~~al~~~~--~~~ 88 (197)
T 3d5n_A 27 NTPIIMRTIRIYGDL-----EK--IIIVGKY--VNEMLPLLM------DQI-VIYNPFWNEGISTSLKLGLRFFK--DYD 88 (197)
T ss_dssp SSBHHHHHHHHTTTS-----BC--CEEECTT--HHHHGGGCT------TSC-EEECTTGGGCHHHHHHHHHHHTT--TSS
T ss_pred ceEHHHHHHHHHHhC-----CE--EEEECCC--HHHHHHHhc------CCE-EEECCCCCCCHHHHHHHHHHhhc--cCC
Confidence 358999999999877 33 2333222 233333222 134 454322 2455555566665542 358
Q ss_pred EEEEECCCccCCChHHHHHHHHc---CCceeeec
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR---NESLIAPL 411 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~---nk~IVaP~ 411 (734)
+++++++|.-+-++++++.|++. +..++.|.
T Consensus 89 ~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~ 122 (197)
T 3d5n_A 89 AVLVALGDMPFVTKEDVNKIINTFKPNCKAVIPT 122 (197)
T ss_dssp EEEEEETTCCCSCHHHHHHHHHTCCTTCSEEEEE
T ss_pred cEEEEeCCccccCHHHHHHHHHHhcCCCcEEEEE
Confidence 99999999944349999999985 23444444
No 60
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=54.28 E-value=67 Score=30.94 Aligned_cols=95 Identities=12% Similarity=0.061 Sum_probs=56.7
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcc-eEEEEeCCCCCcHHHHHHHHHHhhhh--c-
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFK-NVKYIAHNSTVNSKEARNLAVENSLH--K- 377 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~-~V~ii~~~~~~g~a~arN~al~~a~~--~- 377 (734)
..+.|...++++.+...-. ++. |..+. ...+.+++++++.+-... .+.+... ..+...+-..|++.+.+ .
T Consensus 30 g~pli~~~l~~l~~~~~~~-~i~--vv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~~~~ 103 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPSIE-KIV--VGVHG-DWVSHAEDLVDKYLPLYKERIIITKG--GADRNTSIKNIIEAIDAYRPL 103 (236)
T ss_dssp TEEHHHHHHHHHHTCTTCC-CEE--EEECG-GGHHHHHHHHHHHCGGGGGGEEEEEC--CSSHHHHHHHHHHHHHHHSCC
T ss_pred CccHHHHHHHHHHcCCCCC-eEE--EEeCH-HHHHHHHHHHHhccccccCceEEECC--CCchHHHHHHHHHHHHhhccC
Confidence 4699999999999764332 342 33221 222456666655441111 2333322 23445555556655432 2
Q ss_pred -CccEEEEECCCc-cCCChHHHHHHHHc
Q psy14856 378 -GVDFYFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 378 -~~DYlf~vDAD~-~L~np~tL~~LI~~ 403 (734)
.+|+++++++|. +++ +++++.|++.
T Consensus 104 ~~~~~vlv~~~D~P~~~-~~~i~~l~~~ 130 (236)
T 2vsh_A 104 TPEDIVVTHDSVRPFIT-LRMIQDNIQL 130 (236)
T ss_dssp CTTCEEEEEETTCTTCC-HHHHHHHHHH
T ss_pred CCCCEEEEecCCcccCC-HHHHHHHHHH
Confidence 469999999999 665 9999999963
No 61
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=53.70 E-value=69 Score=32.93 Aligned_cols=92 Identities=20% Similarity=0.220 Sum_probs=58.1
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHH-hccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHN-FKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~-~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
..|.|...++++.+. . .++.|.+ + . .+.+.+.+.+.+ .+ .+.+.++..+...|-+.+-..|++.. ...+
T Consensus 36 g~pli~~~l~~l~~~--~-~~i~vv~-~-~-~~~~~i~~~~~~~~~--~~~~~~i~~~~~~gt~~al~~a~~~l--~~~~ 105 (308)
T 2qh5_A 36 HKSLFELSFKRNASL--V-DETLIVC-N-E-KHYFLALEEIKNEIK--NKSVGFLLESLSKNTANAIALSALMS--DKED 105 (308)
T ss_dssp TBCHHHHHHHHHHTT--C-SEEEEEE-E-G-GGHHHHHHHTTTTCS--SCEEEEEEESSCCCHHHHHHHHHHTS--CTTS
T ss_pred CCCHHHHHHHHHHcc--C-CCEEEEE-C-h-hHHHHHHHHHHHhhC--CCccEEEeCCCCCChHHHHHHHHHHh--CCCC
Confidence 468999999999987 2 3443323 2 1 233455555443 21 12455565556667776666666543 2346
Q ss_pred EEEEECCCccCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~ 403 (734)
+++++.+|..+.++++++.+++.
T Consensus 106 ~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 106 LLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp EEEEEESSCBCCCHHHHHHHHHH
T ss_pred eEEEEcCCccccCHHHHHHHHHH
Confidence 89999999998558989988853
No 62
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=53.33 E-value=83 Score=31.88 Aligned_cols=87 Identities=10% Similarity=0.132 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEe--CCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIA--HNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~--~~~~~g~a~arN~al~~a~~~~~D 380 (734)
.|.|...++++.+.. -++|. |.. + . +.+++++++.+ ++++. .+...|-+. -..+++.....++|
T Consensus 43 kPmi~~~l~~l~~~~--i~~Iv--V~t--~-~-~~i~~~~~~~g-----~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 43 KPMIVHVLERARESG--AERII--VAT--D-H-EDVARAVEAAG-----GEVCMTRADHQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EEHHHHHHHHHHHTT--CSEEE--EEE--S-C-HHHHHHHHHTT-----CEEEECCTTCCSHHHH-HHHHHHHHTCCTTC
T ss_pred eEHHHHHHHHHHhCC--CCEEE--EEC--C-H-HHHHHHHHHcC-----CEEEEecCCCCCCHHH-HHHHHHHhccCCCC
Confidence 589999999998875 24543 333 2 2 45566665543 34432 333444332 22333332113689
Q ss_pred EEEEECCCccCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~ 403 (734)
+++++++|.-+-.+++|+.|++.
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~ 131 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADN 131 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHH
Confidence 99999999955459999999973
No 63
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=53.16 E-value=16 Score=37.75 Aligned_cols=83 Identities=14% Similarity=0.224 Sum_probs=55.8
Q ss_pred cceeEEEEcCCCC------CCCCccccCCceEEEEEecCCCCcCCCccEEEeecc--ceeecccceeEEEeCCCccc---
Q psy14856 645 PMSFVVRYRPDEQ------PSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN--CNVTATRMGWMLMHPGRLTH--- 713 (734)
Q Consensus 645 ~~~fvvrY~~~~~------~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--~~v~~~~~G~al~h~g~lth--- 713 (734)
....+.+|-|-.+ -.+++|+|.+.+|+... + +-||+.....+ =.-+.|.+|..||.-|.+-.
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q--d-----~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT--A-----NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC--C-----SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe--c-----CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 4567889975432 34679999999998752 2 34677775322 22345889999998775311
Q ss_pred -------ccCcccCC----ceeEEEEEeeeCC
Q psy14856 714 -------YHEGLQVT----QGTRYIMISFVDP 734 (734)
Q Consensus 714 -------~H~g~~vT----~G~Ryilv~F~~p 734 (734)
.|+...-. ...||-+..|+.|
T Consensus 223 ng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P 254 (280)
T 3on7_A 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHP 254 (280)
T ss_dssp TTSSCCCCEEEECCTTCCTTSCEEECCEEECC
T ss_pred CCcccCCCceEeCCCCCCCCCCeEEEEEEEcC
Confidence 57765432 4579999999988
No 64
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=53.04 E-value=75 Score=30.31 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CCCcHHHHHHHHHHhhhhcCccE
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-STVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~~g~a~arN~al~~a~~~~~DY 381 (734)
.+.|+..++++.+. -+++. |..+.+.. +. .. .++++..+ ...|.+.+-..|++.+ ..|+
T Consensus 40 ~pll~~~l~~l~~~---~~~i~--vv~~~~~~----~~----~~----~~~~v~~~~~~~g~~~~i~~al~~~---~~~~ 99 (201)
T 2e8b_A 40 KKVIERVYETAKSV---FKEVY--IVAKDREK----FS----FL----NAPVVLDEFEESASIIGLYTALKHA---KEEN 99 (201)
T ss_dssp HHHHHHHHHHHHTT---CSEEE--EEESCSGG----GG----GG----TCCEEECCCSSCCHHHHHHHHHHHC---SSSE
T ss_pred eEHHHHHHHHHHHh---CCEEE--EEeCcHHH----hh----cC----CceEEecCCCCCCcHHHHHHHHHHc---CCCC
Confidence 58899999999876 24443 33221111 11 11 34555533 4456666666666553 4799
Q ss_pred EEEECCCccCCChHHHHH-HHHcCCceeee
Q psy14856 382 YFYVDSDSHLDNPDVLKY-LVNRNESLIAP 410 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~-LI~~nk~IVaP 410 (734)
++++.+|.-+-++++++. |+ +.+++.|
T Consensus 100 ~lv~~~D~P~i~~~~i~~~l~--~~~~~v~ 127 (201)
T 2e8b_A 100 VFVLSGDLPLMKKETVLYVLE--NFKEPVS 127 (201)
T ss_dssp EEEEETTCTTCCHHHHHHHHH--TCCSSEE
T ss_pred EEEEeCCcCcCCHHHHHHHHh--cCCEEEE
Confidence 999999996645999999 98 3344433
No 65
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=51.76 E-value=83 Score=31.25 Aligned_cols=87 Identities=8% Similarity=0.152 Sum_probs=53.0
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEE--eCCCCCcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYI--AHNSTVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii--~~~~~~g~a~arN~al~~a~~~~~ 379 (734)
..|.|...++++.+.. . ++|. |.. + + +.+++++++.+ ++++ ..+...|-+.+.. +++......+
T Consensus 26 GkPli~~~l~~l~~~~-~-~~iv--Vv~--~-~-~~i~~~~~~~g-----~~v~~~~~~~~~Gt~~~~~-~~~~l~~~~~ 91 (252)
T 3oam_A 26 GKPMIQWVYEQAMQAG-A-DRVI--IAT--D-D-ERVEQAVQAFG-----GVVCMTSPNHQSGTERLAE-VVAKMAIPAD 91 (252)
T ss_dssp TEEHHHHHHHHHHHTT-C-SEEE--EEE--S-C-HHHHHHHHHTT-----CEEEECCTTCCSHHHHHHH-HHHHTTCCTT
T ss_pred CEEHHHHHHHHHHhCC-C-CeEE--EEC--C-H-HHHHHHHHHcC-----CEEEEcCCCCCCcHHHHHH-HHHhcCcCCC
Confidence 4689999999999875 2 4553 332 2 2 55666665543 3343 3334445444332 2322111257
Q ss_pred cEEEEECCCccCCChHHHHHHHH
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|+++++++|.-+-.+++|+.|++
T Consensus 92 d~vlv~~gD~Pli~~~~i~~l~~ 114 (252)
T 3oam_A 92 HIVVNVQGDEPLIPPAIIRQVAD 114 (252)
T ss_dssp SEEEECCTTCTTCCHHHHHHHHH
T ss_pred CEEEEEeCCeeecCHHHHHHHHH
Confidence 99999999994434999999996
No 66
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=51.54 E-value=20 Score=37.70 Aligned_cols=84 Identities=18% Similarity=0.225 Sum_probs=58.0
Q ss_pred cceeEEEEcCCC----CCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc-ceeecccceeEEEeCCCcc-------
Q psy14856 645 PMSFVVRYRPDE----QPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN-CNVTATRMGWMLMHPGRLT------- 712 (734)
Q Consensus 645 ~~~fvvrY~~~~----~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~-~~v~~~~~G~al~h~g~lt------- 712 (734)
....+.+|-|-. ...+++|.|.+.+|+...=+ +-||+...+.+ =.-+.|.+|..||.-|.+-
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~------~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~ 228 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD------KVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESS------SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEecC------CCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCe
Confidence 356778886532 34689999999999886311 23667764322 1224588999998877421
Q ss_pred ---cccCcccCCceeEEEEEeeeCC
Q psy14856 713 ---HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 713 ---h~H~g~~vT~G~Ryilv~F~~p 734 (734)
-.|++..-..+.||-+..|+.|
T Consensus 229 ~kS~~HRVv~~~~~~R~Sia~F~~p 253 (319)
T 1w9y_A 229 YKSVMHRVIAQKDGARMSLASFYNP 253 (319)
T ss_dssp SCCCCEEECCCSSSCCEEEEEEEEC
T ss_pred eecccceecCCCCCCceEEEEEecC
Confidence 1688877667789999999987
No 67
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=50.38 E-value=85 Score=30.54 Aligned_cols=85 Identities=12% Similarity=0.207 Sum_probs=52.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-C-CCcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-S-TVNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~-~~g~a~arN~al~~a~~~~~ 379 (734)
..|.|...++++.+.... +++. |..+ . +.+.+++++. .++++... + ..+-+.+. .+++. ...
T Consensus 26 g~pli~~~i~~~~~~~~~-~~iv--vv~~--~--~~i~~~~~~~-----~~~~~~~~~~~~~g~~~~~-~~~~~---~~~ 89 (245)
T 1h7e_A 26 GKPMIQHVYERALQVAGV-AEVW--VATD--D--PRVEQAVQAF-----GGKAIMTRNDHESGTDRLV-EVMHK---VEA 89 (245)
T ss_dssp TEEHHHHHHHHHHTCTTC-CEEE--EEES--C--HHHHHHHHHT-----TCEEEECCSCCSSHHHHHH-HHHHH---SCC
T ss_pred CchHHHHHHHHHHhCCCC-CeEE--EECC--c--HHHHHHHHHc-----CCeEEeCCCccCCcHHHHH-HHHHh---CCC
Confidence 469999999999987542 3443 3332 1 4455555543 35555532 2 23333333 23332 357
Q ss_pred cEEEEECCCccCCChHHHHHHHH
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
|+++++++|.-+-++++++.|++
T Consensus 90 ~~~lv~~~D~P~~~~~~i~~l~~ 112 (245)
T 1h7e_A 90 DIYINLQGDEPMIRPRDVETLLQ 112 (245)
T ss_dssp SEEEECCTTCTTCCHHHHHHHHH
T ss_pred CEEEEEcCCcCcCCHHHHHHHHH
Confidence 99999999996545999999996
No 68
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=49.59 E-value=24 Score=35.93 Aligned_cols=94 Identities=13% Similarity=0.201 Sum_probs=52.6
Q ss_pred cEEEEEEecCC-hhHHHHHHHHHHcccCCCce--EEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCC-cH-HHH
Q psy14856 292 SVLISVFIDKP-TAFLEEFLNKIANLNYPAKK--ISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTV-NS-KEA 366 (734)
Q Consensus 292 ~V~I~I~i~n~-~~~L~~fL~sL~~LdYPk~r--i~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~-g~-a~a 366 (734)
+|.|.+++--. ..|++.|++|-++-=-|..+ ++.+|-.........++ -..|.++..++.. .. .-.
T Consensus 2 tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp~~~---------~~~v~~~~~~~~~Wqd~sm~ 72 (246)
T 4ayl_A 2 RIGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYDEEN---------NKHIHRIKQKNLGWPDNTLK 72 (246)
T ss_dssp EEEEEEECCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTTTTT---------CTTEEEEECCCCCTTHHHHT
T ss_pred eEEEEEEEeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCCcCC---------CceEEEEeCCcCCCcccchH
Confidence 46666666222 68999999999997778888 77555431111111011 1235555433322 11 111
Q ss_pred HHHHHH---hhhhcCccEEEEECCCccCCCh
Q psy14856 367 RNLAVE---NSLHKGVDFYFYVDSDSHLDNP 394 (734)
Q Consensus 367 rN~al~---~a~~~~~DYlf~vDAD~~L~np 394 (734)
|=..+. ...+...||+|++|+|..+.++
T Consensus 73 Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~ 103 (246)
T 4ayl_A 73 RFHIFLRIKEQLERETDYLFFFNANLLFTSP 103 (246)
T ss_dssp HHHHHHTTHHHHHHHCSEEEEECTTEEECSC
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCceeecc
Confidence 211221 2222458999999999999854
No 69
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=49.55 E-value=14 Score=38.68 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=54.7
Q ss_pred cceeEEEEcCC----CCCCCCccccCCceEEEEEecCCCCcCCCccEEEeecc--ceeecccceeEEEeCCCccc-----
Q psy14856 645 PMSFVVRYRPD----EQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYN--CNVTATRMGWMLMHPGRLTH----- 713 (734)
Q Consensus 645 ~~~fvvrY~~~----~~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~~~~--~~v~~~~~G~al~h~g~lth----- 713 (734)
....+.+|-|- +.-.+++|+|.+.+|+.. .+ +-||+.....+ =.-+.|.+|..||.-|.+..
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~--qd-----~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG 241 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDINTITLLL--GA-----EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNN 241 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCCSSEEEEE--CC-----TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTT
T ss_pred ceeeeEecCCCCCCcCCcCccceecCceEEEEe--Ec-----CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCC
Confidence 35677888763 234677999999999875 33 24677774222 12345889999998775321
Q ss_pred -----ccCcccCC----ceeEEEEEeeeCC
Q psy14856 714 -----YHEGLQVT----QGTRYIMISFVDP 734 (734)
Q Consensus 714 -----~H~g~~vT----~G~Ryilv~F~~p 734 (734)
.|+..... ...||-+..|+.|
T Consensus 242 ~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P 271 (312)
T 3oox_A 242 VLPSTVHRVVNPPPERRGVPRYSTPFFLHF 271 (312)
T ss_dssp SSCCCCEEECCCCGGGTTSCEEECCEEECC
T ss_pred eecCCCceEeCCCccCCCCCEEEEEEEecC
Confidence 48875432 3459999999987
No 70
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=49.32 E-value=1.1e+02 Score=30.92 Aligned_cols=86 Identities=9% Similarity=0.168 Sum_probs=52.6
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEE--eCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYI--AHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii--~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
.|.|...++++.+.. -++| +|.. + + +.+++++++.+ ++++ .++...|-+.. ..|++.......|
T Consensus 34 kPli~~~l~~l~~~~--i~~V--vVvt--~-~-~~i~~~~~~~g-----~~v~~~~~~~~~Gt~~i-~~a~~~l~~~~~d 99 (256)
T 3tqd_A 34 KPMIQHVYESAIKSG--AEEV--VIAT--D-D-KRIRQVAEDFG-----AVVCMTSSDHQSGTERI-AEAAVALGFEDDE 99 (256)
T ss_dssp EEHHHHHHHHHHHTT--CSEE--EEEE--S-C-HHHHHHHHHTT-----CEEEECCTTCCSHHHHH-HHHHHHTTCCTTC
T ss_pred chHHHHHHHHHHhCC--CCEE--EEEC--C-H-HHHHHHHHHcC-----CeEEEeCCCCCCcHHHH-HHHHHHhCcCCCC
Confidence 589999999998764 2444 3333 2 2 55666665543 3333 23333444332 2344332113679
Q ss_pred EEEEECCCccCCChHHHHHHHH
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~ 402 (734)
+++++++|.-+-.+++|+.|++
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~ 121 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAE 121 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHH
T ss_pred EEEEEeCCcccCCHHHHHHHHH
Confidence 9999999995545999999986
No 71
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=49.15 E-value=87 Score=31.45 Aligned_cols=89 Identities=7% Similarity=0.039 Sum_probs=52.5
Q ss_pred ChhHHHHHH-HHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFL-NKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL-~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~D 380 (734)
..|.|...+ +++.+.. -++| +|..+ + +.+.+++++.+. .+....++...|- .+-..|++.+.....|
T Consensus 25 GkPli~~~i~~~~~~~~--~~~v--vVvt~---~-~~i~~~~~~~g~---~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d 92 (253)
T 4fcu_A 25 DRPMILRVVDQAKKVEG--FDDL--CVATD---D-ERIAEICRAEGV---DVVLTSADHPSGT-DRLSEVARIKGWDADD 92 (253)
T ss_dssp TEEHHHHHHHHHHTCTT--CCEE--EEEES---C-HHHHHHHHTTTC---CEEECCTTCCCHH-HHHHHHHHHHTCCTTC
T ss_pred CeEhHHHHHHHHHHhcC--CCEE--EEECC---H-HHHHHHHHHcCC---eEEEeCCCCCChH-HHHHHHHHhcCcCCCC
Confidence 468999999 9988753 3444 33332 1 445566654431 2222223333332 3334455443223579
Q ss_pred EEEEECCCccCCChHHHHHHHH
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~ 402 (734)
+++++++|.=+-+|++|+.|++
T Consensus 93 ~vlv~~gD~Pli~~~~i~~li~ 114 (253)
T 4fcu_A 93 IIVNVQGDEPLLPAQLVQQVAK 114 (253)
T ss_dssp EEEECCTTCTTCCHHHHHHHHH
T ss_pred EEEEEeCCcccCCHHHHHHHHH
Confidence 9999999994445999999996
No 72
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=49.12 E-value=37 Score=34.19 Aligned_cols=90 Identities=10% Similarity=0.096 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhcc---------------------CcceEEEEeCCCCC
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKT---------------------MFKNVKYIAHNSTV 361 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~---------------------~y~~V~ii~~~~~~ 361 (734)
.|.|...++++.+.. -.++.|.+ + +..+.+++++.+... .-..+.++..++..
T Consensus 33 kpli~~~l~~l~~~g--i~~i~vv~-~---~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 106 (281)
T 3juk_A 33 KPLIQYAVEEAMEAG--CEVMAIVT-G---RNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQKQMK 106 (281)
T ss_dssp SBHHHHHHHHHHHHT--CCEEEEEE-C---TTHHHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEEECSSCC
T ss_pred EEHHHHHHHHHHhCC--CCEEEEEe-c---CCHHHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEEecCCCC
Confidence 399999999999864 23443322 2 222444444322100 01245566666677
Q ss_pred cHHHHHHHHHHhhhhcCccEEEEECCCccCCChH----HHHHHHH
Q psy14856 362 NSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPD----VLKYLVN 402 (734)
Q Consensus 362 g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~----tL~~LI~ 402 (734)
|-+.+-..|++.. ..|+++++.+|.+++ ++ +++.|++
T Consensus 107 Gt~~al~~a~~~l---~~~~~lv~~~D~~~~-~~~~~~~l~~l~~ 147 (281)
T 3juk_A 107 GLGHAILTGEALI---GNEPFAVILADDLCI-SHDHPSVLKQMTS 147 (281)
T ss_dssp CHHHHHHHTHHHH---CSSCEEEECTTEEEE-CTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHc---CCCCEEEEeCCeecc-CccchHHHHHHHH
Confidence 7777666666554 357899999999775 88 8999986
No 73
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=49.11 E-value=74 Score=30.45 Aligned_cols=89 Identities=10% Similarity=0.218 Sum_probs=54.5
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-CC-CcHHHHHHHHHHhhhhcCc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-ST-VNSKEARNLAVENSLHKGV 379 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-~~-~g~a~arN~al~~a~~~~~ 379 (734)
..+.|...++++... -++| +|..+.+. + ++. + ..++++... .. .|...+-..|++.+ ..
T Consensus 32 G~pli~~~l~~l~~~---~~~i--vvv~~~~~--~---~~~-~-----~~~~~v~~~~~~~~G~~~si~~~l~~~---~~ 92 (201)
T 1e5k_A 32 GKPLWQHVADALMTQ---LSHV--VVNANRHQ--E---IYQ-A-----SGLKVIEDSLADYPGPLAGMLSVMQQE---AG 92 (201)
T ss_dssp TEEHHHHHHHHHHHH---CSCE--EEECSSSH--H---HHH-T-----TSCCEECCCTTCCCSHHHHHHHHHHHC---CS
T ss_pred ceeHHHHHHHHHHhh---CCEE--EEEcCCcH--H---HHh-h-----cCCeEEecCCCCCCCHHHHHHHHHHhC---CC
Confidence 468999999998853 2343 34332221 2 221 1 145556443 22 46666666666553 57
Q ss_pred cEEEEECCCc-cCCChHHHHHHHHc--CCceeee
Q psy14856 380 DFYFYVDSDS-HLDNPDVLKYLVNR--NESLIAP 410 (734)
Q Consensus 380 DYlf~vDAD~-~L~np~tL~~LI~~--nk~IVaP 410 (734)
|+++++++|. +++ +++++.|++. +..++.|
T Consensus 93 ~~vlv~~~D~P~i~-~~~i~~l~~~~~~~~~~~~ 125 (201)
T 1e5k_A 93 EWFLFCPCDTPYIP-PDLAARLNHQRKDAPVVWV 125 (201)
T ss_dssp SEEEEEETTCTTCC-TTHHHHHHHTCTTCSEEEE
T ss_pred CcEEEEeCCcCcCC-HHHHHHHHhhcCCCCEEEE
Confidence 9999999999 565 9999999985 3345444
No 74
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=47.68 E-value=15 Score=38.37 Aligned_cols=85 Identities=16% Similarity=0.092 Sum_probs=54.3
Q ss_pred cceeEEEEcCCC--------CCCCCccccCCceEEEEEecCCCCcCCCcc--EEEeecc-ceeecccceeEEEeCCCcc-
Q psy14856 645 PMSFVVRYRPDE--------QPSLRPHHDSSTYTINIALNQVGVDYEGGG--CRFIRYN-CNVTATRMGWMLMHPGRLT- 712 (734)
Q Consensus 645 ~~~fvvrY~~~~--------~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg--~~F~~~~-~~v~~~~~G~al~h~g~lt- 712 (734)
....+.+|-|-. +..+++|+|.+.+|+...=+. .||+ +.....+ =.-+.|.+|..||.-|.+.
T Consensus 157 ~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~-----v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~ 231 (311)
T 1dcs_A 157 PLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPC-----ANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIAT 231 (311)
T ss_dssp CEEEEEEECC-----------CCEEEEEECSSEEEEEEECC-----TTCCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred hhhheecCCCCCcccccCccccccccccCCCeEEEEecCCC-----CCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHH
Confidence 346778886532 334889999999998875212 2332 6664421 1124588999998877421
Q ss_pred ---------cccCcccCC-----ceeEEEEEeeeCC
Q psy14856 713 ---------HYHEGLQVT-----QGTRYIMISFVDP 734 (734)
Q Consensus 713 ---------h~H~g~~vT-----~G~Ryilv~F~~p 734 (734)
-.|++..-. ...||-+..|+.|
T Consensus 232 ~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p 267 (311)
T 1dcs_A 232 LVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRP 267 (311)
T ss_dssp HHTTSCSCCCCEEECCC----CTTCCEEEEEEEECC
T ss_pred HHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcC
Confidence 158877654 4579999999988
No 75
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=46.98 E-value=19 Score=30.35 Aligned_cols=74 Identities=14% Similarity=0.240 Sum_probs=46.7
Q ss_pred EEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEe----------
Q psy14856 37 ITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTD---------- 106 (734)
Q Consensus 37 ltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vD---------- 106 (734)
+.|-+..+.-.....+-| ..|||-..+. .....|.||-+ +++++|.-..+|+||.
T Consensus 5 llvistdtniissvqera-khnypgryir-----------tatssqdirdi---iksmkdngkplvvfvngasqndvnef 69 (112)
T 2lnd_A 5 LLVISTDTNIISSVQERA-KHNYPGRYIR-----------TATSSQDIRDI---IKSMKDNGKPLVVFVNGASQNDVNEF 69 (112)
T ss_dssp EEEECSCHHHHHHHHHHH-HHHSCTTTEE-----------EECSHHHHHHH---HHHHTTCCSCEEEEECSCCHHHHHHH
T ss_pred EEEEecCchHHHHHHHHh-hcCCCCceee-----------eccchhhHHHH---HHHHHhcCCeEEEEecCcccccHHHH
Confidence 334444444444444444 4678766552 12234666544 4455565667999994
Q ss_pred ---------ccceeEeCCHHHHHHHHhc
Q psy14856 107 ---------SYDVIIDGGVNDILERFNT 125 (734)
Q Consensus 107 ---------syDv~f~~~~~~ll~rf~~ 125 (734)
||||+=...||||-+|-.+
T Consensus 70 qneakkegvsydvlkstdpeeltqrvre 97 (112)
T 2lnd_A 70 QNEAKKEGVSYDVLKSTDPEELTQRVRE 97 (112)
T ss_dssp HHHHHHHTCEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHhcCcchhhhccCCHHHHHHHHHH
Confidence 7999999999999998766
No 76
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=44.06 E-value=40 Score=35.44 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=54.9
Q ss_pred cee--EEEEc------C-------CC-CCCCCccccCCceEEEEEecCCCCcCCCccEEEe-eccceeecccceeEEEeC
Q psy14856 646 MSF--VVRYR------P-------DE-QPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFI-RYNCNVTATRMGWMLMHP 708 (734)
Q Consensus 646 ~~f--vvrY~------~-------~~-~~~l~~H~D~S~~T~ni~Ln~~~~dfeGGg~~F~-~~~~~v~~~~~G~al~h~ 708 (734)
... +.+|- | +. .-.+++|.|.+.+|+... + +-||+... +.+=.-+.|.+|..||.-
T Consensus 181 ~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q--d-----~v~GLQV~~~~gWi~V~p~pgalvVNi 253 (331)
T 1odm_A 181 LASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ--S-----NVQNLQVETAAGYQDIEADDTGYLINC 253 (331)
T ss_dssp CCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE--C-----SSCCEEEEETTEEEECCCCTTSEEEEE
T ss_pred HHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee--C-----CCCCEEEEcCCCeEECCCCCCeEEEEc
Confidence 445 88897 5 22 345789999999998764 3 24677775 222222458889999887
Q ss_pred CCcc----------cccCcccCCceeEEEEEeeeCC
Q psy14856 709 GRLT----------HYHEGLQVTQGTRYIMISFVDP 734 (734)
Q Consensus 709 g~lt----------h~H~g~~vT~G~Ryilv~F~~p 734 (734)
|.+- -.|++.. ....||-+..|+.|
T Consensus 254 GD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P 288 (331)
T 1odm_A 254 GSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNL 288 (331)
T ss_dssp CHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECC
T ss_pred cHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcC
Confidence 6421 1588763 35679999999987
No 77
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=43.67 E-value=94 Score=30.75 Aligned_cols=168 Identities=13% Similarity=0.156 Sum_probs=85.3
Q ss_pred CChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhh-cCc
Q psy14856 301 KPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLH-KGV 379 (734)
Q Consensus 301 n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~-~~~ 379 (734)
+..|.|...++++.+.... ++|. |..+.+ ..+.+++.+.. .++++.... +...+--.|++.+.. ..+
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~iv--Vv~~~~-~~~~~~~~~~~------~v~~v~gg~--~r~~sv~~gl~~~~~~~~~ 100 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DTVV--VAVPAD-RTDEARQILGH------RAMIVAGGS--NRTDTVNLALTVLSGTAEP 100 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CEEE--EEECGG-GHHHHHHHHGG------GCEEEECCS--SHHHHHHHHHGGGC---CC
T ss_pred CCeEHHHHHHHHHHhCCCC-CeEE--EECChH-HHHHHHHHhcC------CeEEEcCCC--chHHHHHHHHHHhhhcCCC
Confidence 4579999999999876433 3443 333222 22344444432 455664322 222333345544321 126
Q ss_pred cEEEEECCCccCCChHHHHHHHHc--C-CceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcceeeece
Q psy14856 380 DFYFYVDSDSHLDNPDVLKYLVNR--N-ESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPY 456 (734)
Q Consensus 380 DYlf~vDAD~~L~np~tL~~LI~~--n-k~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~ 456 (734)
|+++++|+|.=+-++++|+.|++. + ...+.|.+.-.+..+ . ..++|...++ ++ | .++|.+-
T Consensus 101 d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~~~p~~dt~~----~-~~~~g~v~~~------~~--r--~~l~~~q- 164 (231)
T 3q80_A 101 EFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIK----A-VDANGVVLGT------PE--R--AGLRAVQ- 164 (231)
T ss_dssp SEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEEEECCSSCEE----E-ECTTSBEEEC------CC--G--GGEEEEC-
T ss_pred CEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEEEEeccCCEE----E-EcCCCcEEEe------cc--h--hheEEEc-
Confidence 999999999855569999999974 3 445445443222221 1 1234443333 22 3 5677642
Q ss_pred eeeEEeeehhhHhhcccccccc---cCCCchhHHHHHHHHHcCeeEEEe
Q psy14856 457 ITNCYLMKTSVIKATNIKTIYT---LNSMDYDMAFCTNLRNKGIHLKID 502 (734)
Q Consensus 457 v~~~~LI~~~vL~~~~~~~~f~---~~~~deDm~Fc~~ar~~Gi~myv~ 502 (734)
+.+..+.+.|.+ -...... ...+.||..... +.|..+.+.
T Consensus 165 --TPq~F~~~~L~~-a~~~~~~~n~~~~~TD~~~~~~---~~g~~v~~v 207 (231)
T 3q80_A 165 --TPQGFTTDLLLR-SYQRGSLDLPAAEYTDDASLVE---HIGGQVQVV 207 (231)
T ss_dssp --SCEEEEHHHHHH-HHHHHTC-----CCSSSHHHHH---HTTCCCEEE
T ss_pred --CCcEEEHHHHHH-HHHHHHhhcCCCCCCcHHHHHH---HcCCcEEEE
Confidence 235666666654 1110010 112455655543 467766653
No 78
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=42.61 E-value=1.4e+02 Score=28.86 Aligned_cols=87 Identities=13% Similarity=0.142 Sum_probs=52.5
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC-----CCCcHHHHHHHHHHhhhh
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN-----STVNSKEARNLAVENSLH 376 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~-----~~~g~a~arN~al~~a~~ 376 (734)
..|.|...++++.+...- ++| +|.. + . +.+++++++. .++++..+ ...+...+-..|++.+
T Consensus 27 Gkpli~~~i~~~~~~~~~-~~i--vv~~--~-~-~~i~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~v~~al~~~-- 92 (229)
T 1qwj_A 27 GVPLIGWVLRAALDAGVF-QSV--WVST--D-H-DEIENVAKQF-----GAQVHRRSSETSKDSSTSLDAIVEFLNYH-- 92 (229)
T ss_dssp TEEHHHHHHHHHHHHTCC-SEE--EEEE--S-C-HHHHHHHHHT-----TCEEEECCGGGSSTTCCHHHHHHHHHTTC--
T ss_pred CEEHHHHHHHHHHhCCCc-CEE--EEEC--C-h-HHHHHHHHHc-----CCEEEeChhhhcCCCCcHHHHHHHHHHhc--
Confidence 468999999999876532 344 3333 1 2 3355555543 34444332 1223233334444433
Q ss_pred cCccEEEEECCCccCCChHHHHHHHH
Q psy14856 377 KGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
..+|+++++++|.-+-++++|+.|++
T Consensus 93 ~~~d~vlv~~~D~Pli~~~~i~~l~~ 118 (229)
T 1qwj_A 93 NEVDIVGNIQATSPCLHPTDLQKVAE 118 (229)
T ss_dssp TTCSEEEEECTTCTTCCHHHHHHHHH
T ss_pred CCCCEEEEecCCCCcCCHHHHHHHHH
Confidence 25799999999996656999999996
No 79
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=42.15 E-value=96 Score=34.59 Aligned_cols=109 Identities=12% Similarity=0.245 Sum_probs=60.2
Q ss_pred ecCChhHHHHHHHHHHccc--CCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC------------------
Q psy14856 299 IDKPTAFLEEFLNKIANLN--YPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN------------------ 358 (734)
Q Consensus 299 i~n~~~~L~~fL~sL~~Ld--YPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~------------------ 358 (734)
+.+..++|+..++++.++. | ...|.++|-+| +++.+.++++++++...-..|.++..+
T Consensus 117 V~~gk~~Le~~i~~i~~l~~~~-G~~Ip~vImts-~~t~e~t~~~~~~~~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~ 194 (488)
T 2i5k_A 117 VREGNTFLDLSVRQIEYLNRQY-DSDVPLLLMNS-FNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYD 194 (488)
T ss_dssp CBTTBCHHHHHHHHHHHHHHHH-TCCCEEEEECC-TTTHHHHHHHHGGGCSSSCEEEEECCCCEECEETTTCCBSCSSSS
T ss_pred cCCCCcHHHHHHHHHHHhHHhc-CCCccEEEEEC-CCCHHHHHHHHHhccccCceEEEEEeCccceEccccceeeccCCC
Confidence 3556799999999998872 1 12344555554 366667788887643211135544222
Q ss_pred ------CCCcHHHHHH----HH-HHhhhhcCccEEEEECCCccCC--ChHHHHHHHHcCCceee
Q psy14856 359 ------STVNSKEARN----LA-VENSLHKGVDFYFYVDSDSHLD--NPDVLKYLVNRNESLIA 409 (734)
Q Consensus 359 ------~~~g~a~arN----~a-l~~a~~~~~DYlf~vDAD~~L~--np~tL~~LI~~nk~IVa 409 (734)
+..|-+.+-. .+ ++.-.+...+|++++..|+... +|..|...++.+..+..
T Consensus 195 ~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~~L~~~~~~~a~~t~ 258 (488)
T 2i5k_A 195 SPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGAEYIM 258 (488)
T ss_dssp SCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHHHHHHHHHSCCSEEE
T ss_pred CCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHHHHHHHHhcCCcEEE
Confidence 2233333322 12 3333234578999999999553 34445444455544433
No 80
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=40.33 E-value=16 Score=39.18 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=40.1
Q ss_pred CCcceeEEEEcCCCCCCCCccccCC-ce---EEEEEecCCCCcCCCccEEEee---ccceeecccceeEEEeCCCcc--c
Q psy14856 643 RAPMSFVVRYRPDEQPSLRPHHDSS-TY---TINIALNQVGVDYEGGGCRFIR---YNCNVTATRMGWMLMHPGRLT--H 713 (734)
Q Consensus 643 ~~~~~fvvrY~~~~~~~l~~H~D~S-~~---T~ni~Ln~~~~dfeGGg~~F~~---~~~~v~~~~~G~al~h~g~lt--h 713 (734)
..+...+-.|.++. .+.+|.|+. .+ -+.|+|+... .|. |.. ....+ ..+.|..++.+|... +
T Consensus 196 ~~n~~lvN~Y~~G~--~I~~H~D~~~~~~~~I~slSLG~~~-~f~-----f~~~~~~~~~l-~L~~gsLlvM~G~~r~~w 266 (345)
T 3tht_A 196 KPDQMTINQYEPGQ--GIPAHIDTHSAFEDEIVSLSLGSEI-VMD-----FKHPDGIAVPV-MLPRRSLLVMTGESRYLW 266 (345)
T ss_dssp CCSEEEEEEECTTC--CEEEECCCTTTBCSCEEEEEESSCE-EEE-----EECTTSCEEEE-EECTTEEEEECTHHHHTS
T ss_pred CCCEEEEEEecCCC--CEeeccCCchhcCCeEEEEECCCce-eEE-----EccCCCceEEE-EcCCCcEEEEChHHhhce
Confidence 35677899999876 799999985 32 3455555321 111 111 01122 367888888888432 3
Q ss_pred ccCcccCC
Q psy14856 714 YHEGLQVT 721 (734)
Q Consensus 714 ~H~g~~vT 721 (734)
.|+-.++.
T Consensus 267 ~H~I~~~~ 274 (345)
T 3tht_A 267 THGITCRK 274 (345)
T ss_dssp EEEECCCS
T ss_pred EccCCccc
Confidence 36544443
No 81
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=37.75 E-value=40 Score=31.76 Aligned_cols=91 Identities=12% Similarity=0.206 Sum_probs=51.3
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|...++++.+.. - ++ ++|..+.+ . +.+++++.+.-.....+.++... . ..+..++..|.+.-.|+
T Consensus 26 g~pli~~~l~~l~~~~-~-~~--v~vv~~~~-~-~~i~~~~~~~~~~~~~~~~~~~~-~----~g~~~si~~al~~~~~~ 94 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSK-V-NN--IFIATSPN-T-PKTKEYINSAYKDYKNIVVIDTS-G----KGYIEDLNECIGYFSEP 94 (196)
T ss_dssp TEEHHHHHHHHHHSSS-C-CC--EEEECCTT-C-HHHHHHHHHHTTTTTEEEE-------------CCCCCTTTTTCSSC
T ss_pred CEEHHHHHHHHHHHCC-C-CE--EEEEeCCC-h-HHHHHHHHhhccCCCCEEEEECC-C----CCcHHHHHHHHHhCCCC
Confidence 4699999999999876 2 23 34444333 2 44555655421111255555322 1 22222343443322799
Q ss_pred EEEECCCccCCChHHHHHHHHc
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~~ 403 (734)
++++++|.-+-++++|+.|++.
T Consensus 95 vlv~~~D~P~i~~~~i~~l~~~ 116 (196)
T 3rsb_A 95 FLVVSSDLINLKSKIINSIVDY 116 (196)
T ss_dssp EEEEETTEESCCHHHHHHHHHH
T ss_pred EEEEeCCcccCCHHHHHHHHHH
Confidence 9999999954449999999963
No 82
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=37.30 E-value=67 Score=32.17 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=55.2
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|...++++.+.. -+++.| ..+.++. +.+.+++......-..+.++..++..|-+.+-..|++.. ..|+
T Consensus 54 g~pli~~~l~~l~~~g--~~~iiv--v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~---~~~~ 125 (269)
T 4ecm_A 54 RYPMIYHAVYKLKQCD--ITDIMI--ITGKEHM-GDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFV---GNDR 125 (269)
T ss_dssp TEEHHHHHHHHHHHTT--CCEEEE--EECTTTH-HHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHH---TTSE
T ss_pred CEEHHHHHHHHHHHCC--CCEEEE--ECChhhH-HHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhc---CCCc
Confidence 5799999999999874 234433 3222222 334444432111112455665666677776666666553 3689
Q ss_pred EEEECCCccCCChHHHHHHHH
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~ 402 (734)
++++.+|..+. ..++.|++
T Consensus 126 ~lv~~~D~~~~--~~l~~l~~ 144 (269)
T 4ecm_A 126 MVVILGDNIFS--DDIRPYVE 144 (269)
T ss_dssp EEEEETTEEES--SCSHHHHH
T ss_pred EEEEeCCccCc--cCHHHHHH
Confidence 99999999774 56667775
No 83
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=35.67 E-value=1.7e+02 Score=25.69 Aligned_cols=84 Identities=8% Similarity=0.127 Sum_probs=51.6
Q ss_pred CCCcEEEEEEecCCh--h--HHHHHHHHHHcccCCCceEEEEEec-CC-CCcHHHHHHHHHHhccCc--ceEEEEeCCCC
Q psy14856 289 QFPSVLISVFIDKPT--A--FLEEFLNKIANLNYPAKKISMFVYN-NQ-EYHAPLFDDYIHNFKTMF--KNVKYIAHNST 360 (734)
Q Consensus 289 ~~P~V~I~I~i~n~~--~--~L~~fL~sL~~LdYPk~ri~l~I~n-s~-D~t~~il~~f~~~~~~~y--~~V~ii~~~~~ 360 (734)
++..|.|+.|+|+.. | .+..|++.+..+ ....++-+|.-. .. ....+.+++.+++.+-.. ..+++...++.
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~-l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~p~~ 123 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEISTK-ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPDE 123 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHGGG-CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCEEEESSCGG
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHHhh-cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCceEEecCCCH
Confidence 467899999999853 3 699999999876 445555454432 22 345677777777665432 23555444333
Q ss_pred CcHHHHHHHHHHhh
Q psy14856 361 VNSKEARNLAVENS 374 (734)
Q Consensus 361 ~g~a~arN~al~~a 374 (734)
.. .++++.|-+.|
T Consensus 124 ~d-~~~~~~~~~l~ 136 (138)
T 5nul_A 124 AE-QDCIEFGKKIA 136 (138)
T ss_dssp GH-HHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHh
Confidence 34 55665555443
No 84
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=35.46 E-value=1e+02 Score=31.66 Aligned_cols=92 Identities=7% Similarity=0.103 Sum_probs=52.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC---------------CCCcHHHH
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN---------------STVNSKEA 366 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~---------------~~~g~a~a 366 (734)
..+.|...++++.+... .++.+.+ + ....+.+++++.........+.++..+ +..|-+.|
T Consensus 32 g~pli~~~l~~~~~~~~--~~i~vv~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~a 106 (303)
T 3pnn_A 32 GDTIMDYSVYDAIRAGF--GRLVFVI-R--HSFEKEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNHA 106 (303)
T ss_dssp SCCHHHHHHHHHHHHTC--CEEEEEE-C--GGGHHHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHH
T ss_pred CeeHHHHHHHHHHHCCC--CeEEEEc-C--chHHHHHHHHHHHHhccCCcEEEEecccccccccccccccccccCCcHHH
Confidence 35899999999987642 3443333 2 122345555554322112346665544 34555554
Q ss_pred HHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 367 RNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 367 rN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
-..|++. .+ +.++++.+|.+++ +++++.|++.
T Consensus 107 l~~a~~~---i~-~~~lV~~gD~l~~-~~~~~~l~~~ 138 (303)
T 3pnn_A 107 VLMGRDA---IR-EPFAVINADDFYG-RNGFEVLARK 138 (303)
T ss_dssp HHTTTTT---CC-SCEEEEESSCBCC-HHHHHHHHHH
T ss_pred HHHHHHh---cC-CCEEEEECCeecC-HHHHHHHHHH
Confidence 4444333 23 4556778999775 9999999863
No 85
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=34.97 E-value=1.7e+02 Score=32.35 Aligned_cols=112 Identities=16% Similarity=0.270 Sum_probs=65.7
Q ss_pred ecCChhHHHHHHHHHHccc--CCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCC------------------
Q psy14856 299 IDKPTAFLEEFLNKIANLN--YPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHN------------------ 358 (734)
Q Consensus 299 i~n~~~~L~~fL~sL~~Ld--YPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~------------------ 358 (734)
+.+.-++|+..+++|.++. | ...|.++|-+| .+|.+.+++|.+++...--.|.++..+
T Consensus 104 v~~gkp~Le~~i~~l~~~~~~~-G~~ip~vimts-~~t~e~t~~~f~~~~~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~ 181 (469)
T 2icy_A 104 VRDGLTFLDLIVIQIENLNNKY-GCKVPLVLMNS-FNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGK 181 (469)
T ss_dssp EETTEEHHHHHHHHHHHHHHHH-SCCCCEEEEEC-TTTHHHHHHHHGGGTTSSSCEEEEECCCEECEETTTTEEGGGGTC
T ss_pred cCCCCCHHHHHHHHHHHHHHhc-CCCccEEEEeC-CCCHHHHHHHHHhcccCCceEEEEEecceeeEccccCccccCCCC
Confidence 3456899999999999873 1 12244545554 477788888887753211134433111
Q ss_pred ------CCCcHHH----HHHHH-HHhhhhcCccEEEEECCCccCC--ChHHHHHHHHcCCceeeecc
Q psy14856 359 ------STVNSKE----ARNLA-VENSLHKGVDFYFYVDSDSHLD--NPDVLKYLVNRNESLIAPLL 412 (734)
Q Consensus 359 ------~~~g~a~----arN~a-l~~a~~~~~DYlf~vDAD~~L~--np~tL~~LI~~nk~IVaP~l 412 (734)
+..|-+. +++.+ ++.-.+...+|+|+..+|+... +|..|...++.+..+..-+.
T Consensus 182 ~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll~~~~~~~a~~t~~v~ 248 (469)
T 2icy_A 182 TDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVT 248 (469)
T ss_dssp CSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHHHHHHHHTCSEEEEEE
T ss_pred CccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHHHHHHHcCCCeeEEEE
Confidence 1222222 22223 3333334579999999998642 57777777777766655544
No 86
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=34.70 E-value=24 Score=36.12 Aligned_cols=73 Identities=22% Similarity=0.339 Sum_probs=45.0
Q ss_pred EEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccceeeeeHH--HHHHHHHhc-
Q psy14856 101 IILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAK--DIKELISNR- 177 (734)
Q Consensus 101 lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG~~iG~a~--~l~~l~~~~- 177 (734)
=||+.|+ |++++.+.++|.+. . -|+|- ||. . -+.+.|||-++=... ...++++..
T Consensus 98 ~vlylD~-D~~v~~~~~~Lf~~----~---~~aA~----~d~---------~-~~~~fNsGv~li~p~~~~~~~l~~~~~ 155 (263)
T 3u2u_A 98 KCVFMDA-DTLVLANIDDLFDR----E---ELSAA----PDP---------G-WPDCFNSGVFVYQPSVETYNQLLHLAS 155 (263)
T ss_dssp EEEEECT-TEEECSCCGGGGGS----C---SSEEE----ECT---------T-STTSEEEEEEEECCCHHHHHHHHHHHH
T ss_pred eEEEEcC-CEeeccCHHHHhCC----C---cceEe----ccC---------C-CCccccCeEEEEcccHHHHHHHHHHHH
Confidence 7899999 99999999988643 1 12221 221 0 136899997765422 223333322
Q ss_pred -cCCCCCChhHHHHHhhhc
Q psy14856 178 -SIKNEEDDQLYYALLFLD 195 (734)
Q Consensus 178 -~~~d~~dDQl~~t~i~l~ 195 (734)
...-...||-++..+|-+
T Consensus 156 ~~~~~~~~DQd~LN~~f~~ 174 (263)
T 3u2u_A 156 EQGSFDGGDQGILNTFFSS 174 (263)
T ss_dssp HHCCTTSSHHHHHHHHTTT
T ss_pred hcCCCCcccHHHHHHHhcc
Confidence 123455799999998865
No 87
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=33.52 E-value=1.4e+02 Score=30.49 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=29.1
Q ss_pred ceeEEEEcCCCCCCCCccccCC------ceEEEEEecCCCCcCCCccEEEee
Q psy14856 646 MSFVVRYRPDEQPSLRPHHDSS------TYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 646 ~~fvvrY~~~~~~~l~~H~D~S------~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
..+.+..+++ ...+.+|.|.| .+++.-|+..+. +||+|.|..
T Consensus 92 ~v~~v~~~~~-~~~~~wHtD~sy~~~pP~~~~L~c~~~p~---~GG~T~~ad 139 (301)
T 1oih_A 92 YLLQLDGAQG-QRANSWHTDVTFVEAYPKASILRSVVAPA---SGGDTVWAN 139 (301)
T ss_dssp SCEEEC------CCCSCBCTTTTSSSCCSEEEEEEEECCS---SCCCEEEEE
T ss_pred ceEEEecCCC-CcCcCCEecccCcCCCCceEEEEEeecCC---CCCcccccc
Confidence 4455543333 44688999988 699999998753 899999954
No 88
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=33.43 E-value=1.1e+02 Score=29.04 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=31.5
Q ss_pred HHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhcCCCcEEEccCCcccCCC
Q psy14856 85 NLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDT 142 (734)
Q Consensus 85 ~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~~~~~ilfsae~~cwP~~ 142 (734)
......++.-+ . +.|+|.|+-|++--.-.+.+++.+.+.+..++++.-...+++.
T Consensus 74 ~a~N~g~~~a~--g-~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~ 128 (240)
T 3bcv_A 74 MACNSGLDVAT--G-EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAG 128 (240)
T ss_dssp HHHHHHHHHCC--S-SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC---------
T ss_pred HHHHHHHHHcC--C-CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCC
Confidence 34444555432 2 4999999977654333488888888777788887655555554
No 89
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=32.30 E-value=3.7e+02 Score=28.76 Aligned_cols=106 Identities=12% Similarity=0.126 Sum_probs=58.6
Q ss_pred CCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCC-CCcHHHHHHHHHHhccCcceEEEEeCCCCC--c---H
Q psy14856 290 FPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQ-EYHAPLFDDYIHNFKTMFKNVKYIAHNSTV--N---S 363 (734)
Q Consensus 290 ~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~-D~t~~il~~f~~~~~~~y~~V~ii~~~~~~--g---~ 363 (734)
.++|..+|.+++..+.++++|+.| .-|...+-|-++... +.-.+.+++.. ..+++|.++...... | -
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~n~y~IHvD~ks~~~~~~~~~~~~----~~f~NV~v~~~~~~v~WGg~S~ 155 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCIHVDRKAEESFLAAVQGIA----SCFDNVFVASQLESVVYASWTR 155 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEEEECTTSCHHHHHHHHHHH----HTCTTEEECSSCCCCCTTSHHH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEEEEeCCCCHHHHHHHHHHH----hcCCCEEEeccCcccccCCchH
Confidence 357999999998877777777666 447666555554322 21122222222 236788887433222 2 2
Q ss_pred HHHHHHHHHhhhh--cCccEEEEE-CCCccCCChHHHHHHHH
Q psy14856 364 KEARNLAVENSLH--KGVDFYFYV-DSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 364 a~arN~al~~a~~--~~~DYlf~v-DAD~~L~np~tL~~LI~ 402 (734)
.+|--.+++.|++ .+-||+..+ .+|.=|.+.+.|...++
T Consensus 156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~ 197 (391)
T 2gak_A 156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLK 197 (391)
T ss_dssp HHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHH
Confidence 3455555666654 245665555 55555555555555444
No 90
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=31.57 E-value=1.3e+02 Score=30.47 Aligned_cols=91 Identities=10% Similarity=0.031 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHh----------c------------cCcceEEEEeCCCC
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNF----------K------------TMFKNVKYIAHNST 360 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~----------~------------~~y~~V~ii~~~~~ 360 (734)
.+.|...++++.+.. -+++.|.+ + +..+.+++.+... + ..-..+.++..++.
T Consensus 39 kpli~~~l~~l~~~g--i~~i~vv~-~---~~~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 112 (302)
T 2e3d_A 39 KPLIQYVVNECIAAG--ITEIVLVT-H---SSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLA 112 (302)
T ss_dssp EEHHHHHHHHHHHTT--CCEEEEEE-C---GGGHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEECSSC
T ss_pred eEHHHHHHHHHHHCC--CCEEEEEe-C---CCHHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeCCcc
Confidence 599999999999874 23453333 2 1123344433210 0 00124556666667
Q ss_pred CcHHHHHHHHHHhhhhcCccEEEEECCCccCCC---hH---HHHHHHH
Q psy14856 361 VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDN---PD---VLKYLVN 402 (734)
Q Consensus 361 ~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~n---p~---tL~~LI~ 402 (734)
.|-+.+-..|++.. ..|.++++.+|..++. +. +++.|++
T Consensus 113 ~Gt~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~ 157 (302)
T 2e3d_A 113 KGLGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIR 157 (302)
T ss_dssp CCHHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHH
T ss_pred CCHHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHH
Confidence 78777766666553 2478999999999852 45 7888886
No 91
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=30.70 E-value=69 Score=31.09 Aligned_cols=88 Identities=10% Similarity=0.104 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCC-CcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNST-VNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~-~g~a~arN~al~~a~~~~~D 380 (734)
..+.|+..++++.+. -+++.+ .. ....++.+.+.++.+ ..++++..... .|.+.+-..|++. .. +
T Consensus 44 g~pli~~~l~~l~~~---~~~i~v--v~--~~~~~~~~~~~~~~~---~~~~~v~~~~~~~g~~~~i~~a~~~---~~-~ 109 (232)
T 2xme_A 44 GCEIILRTMKLLSPH---VSEFII--VA--SRYADDIDAFLKDKG---FNYKIVRHDRPEKGNGYSLLVAKNH---VE-D 109 (232)
T ss_dssp TEEHHHHHHHHHGGG---EEEEEE--EE--STTHHHHHHHHTTSC---CCEEEEECSCGGGCHHHHHHTTGGG---CC-S
T ss_pred CEEHHHHHHHHHHHh---CCEEEE--Ee--CChHHHHHHHHHhcC---CcEEEEECCCCCCCcHHHHHHHHHH---CC-C
Confidence 358999999999876 234433 22 223344444433221 24677764332 4444444444433 23 4
Q ss_pred EEEEECCCccCCChHHHHHHHHcC
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNRN 404 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~n 404 (734)
.++++.+|..+ ++++++.|++..
T Consensus 110 ~~lv~~~D~p~-~~~~~~~l~~~~ 132 (232)
T 2xme_A 110 RFILTMGDHVY-SQQFIEKAVRGE 132 (232)
T ss_dssp SEEEEETTEEE-CHHHHHHHTTCC
T ss_pred CEEEEcCCccc-CHHHHHHHHhCC
Confidence 56678999998 599999998753
No 92
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=30.51 E-value=2.7e+02 Score=32.79 Aligned_cols=102 Identities=12% Similarity=0.032 Sum_probs=63.1
Q ss_pred CCcEEEEEeecCCCchH-HHHHHHHHHcCCcc---e--eeccCcc------------------------cC---CCC--C
Q psy14856 31 EDKFLVITVASNETDGY-KRFIQSAEVNKLQV---K--TLGLHQP------------------------WL---GGD--M 75 (734)
Q Consensus 31 ~~~l~vltvat~~~~~~-~r~~~Sa~~~~y~~---~--vlg~g~~------------------------W~---gg~--~ 75 (734)
.+++-|++|+=++.+.+ .+.++|+....||- . |+.-|.. +. +-. .
T Consensus 139 ~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~ 218 (802)
T 4hg6_A 139 LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYST 218 (802)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEE
Confidence 35788999888887766 88999999998874 3 3332210 00 000 0
Q ss_pred CCCCccchHHHHHHHHhhcCCCCCeEEEEEeccceeEeCCHHHHHHHHhc-CCCcEEEccC
Q psy14856 76 SSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNT-FDANIVFGAE 135 (734)
Q Consensus 76 ~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~f~~~~~~ll~rf~~-~~~~ilfsae 135 (734)
...+.+.|...+...++..+ .| +|++.|+-|++--.-.+.+++.+.+ .+..++.+.-
T Consensus 219 ~~~~~~GKa~alN~gl~~a~--gd-~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~ 276 (802)
T 4hg6_A 219 RERNEHAKAGNMSAALERLK--GE-LVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPH 276 (802)
T ss_dssp CSSCCSHHHHHHHHHHHHCC--CS-EEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCC
T ss_pred ecCCCCcchHHHHHHHHhcC--CC-EEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccE
Confidence 12333567777888887653 34 9999999554422224788888854 4555555543
No 93
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=30.16 E-value=1.9e+02 Score=27.41 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=52.6
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..+.|...++++.+.... +++ +|..+. ...+.++++.+ ...|.++... .+...+-..|++.+ ...|+
T Consensus 29 g~pli~~~l~~l~~~~~~-~~i--~vv~~~-~~~~~~~~~~~-----~~~v~~~~~~--~~~~~~i~~al~~~--~~~~~ 95 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVI-DRI--VIAVPP-ALTDESKLVFG-----GEDSVIVSGG--VDRTESVALALEAA--GDAEF 95 (223)
T ss_dssp TEEHHHHHHHHHHHHSCC-SEE--EEEECG-GGHHHHHHHTC-----BTTEEEEECC--SSHHHHHHHHHTTC--TTCSE
T ss_pred CeEHHHHHHHHHhcCCCC-CeE--EEEEcc-cHHHHHHHHhc-----cCCeEEEcCC--CCHHHHHHHHHHhc--CCCCE
Confidence 469999999999876533 244 233222 22233444332 1246666432 23344444444433 26799
Q ss_pred EEEECCCccCCChHHHHHHHHc
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~~ 403 (734)
++++++|.-+-++++++.|++.
T Consensus 96 vlv~~~D~P~~~~~~i~~l~~~ 117 (223)
T 2xwl_A 96 VLVHDAARALTPPALIARVVAA 117 (223)
T ss_dssp EEECCTTCTTCCHHHHHHHHHH
T ss_pred EEEEcCCcccCCHHHHHHHHHH
Confidence 9999999954349999999973
No 94
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=29.67 E-value=2e+02 Score=28.27 Aligned_cols=86 Identities=16% Similarity=0.137 Sum_probs=51.9
Q ss_pred cEEEEEeecCCCchHHHHHHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEEEecccee-
Q psy14856 33 KFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVI- 111 (734)
Q Consensus 33 ~l~vltvat~~~~~~~r~~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~vDsyDv~- 111 (734)
++|.++|.-...- -.++..+...|+++.++-. + +.=.-++=..+..+|++. +-| .+||.|| ||+
T Consensus 2 ~~~~~~~~~~~~~--l~l~~~l~~~gi~~~l~~~-------~--SlI~raRN~lv~~Fl~~~--~~d-hllfIDA-D~~~ 66 (203)
T 2c0n_A 2 RTLFFIPSMGSVR--LPLIDFLVKNDIEYVILSR-------R--NHVAVQREIALDMFLEMK--DYD-TLAFLDE-DVVP 66 (203)
T ss_dssp CEEEEEECSSCCC--HHHHHHHHHTTCCEEEECC-------C--SCHHHHHHHHHHHHHHCT--TCC-EEEEECT-TEEE
T ss_pred ceEEEeccCCcee--hHHHHHHHhCCCeEEEEcc-------c--cchHHHHHHHHHHHHhcC--CCC-EEEEEeC-CCCc
Confidence 3555655443322 5566777779999998822 1 110112333455566643 224 9999999 755
Q ss_pred EeCCHHHHHHHHhcCCCcEEEcc
Q psy14856 112 IDGGVNDILERFNTFDANIVFGA 134 (734)
Q Consensus 112 f~~~~~~ll~rf~~~~~~ilfsa 134 (734)
+.-+|+.+.+.. +.+..||.|.
T Consensus 67 I~FdPe~V~rLl-~~g~DVV~Gs 88 (203)
T 2c0n_A 67 IEIDFQKVEAKF-NEGYDVVCGY 88 (203)
T ss_dssp EECCHHHHHHHH-HHTCSEEEEE
T ss_pred cccCHHHHHHHH-hCCCCEEEEE
Confidence 556677666555 7788888865
No 95
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=28.78 E-value=99 Score=29.96 Aligned_cols=90 Identities=9% Similarity=0.090 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|...++++.+.... ++| +|..+.+. .+ +.+ +...+. ..|+++.+. .+...+-..|++.+ ...|+
T Consensus 34 g~pll~~~i~~l~~~~~~-~~i--vvv~~~~~-~~-~~~-~~~~~~--~~v~~~~~~--~g~~~~i~~al~~~--~~~~~ 101 (236)
T 1i52_A 34 NQTILEHSVHALLAHPRV-KRV--VIAISPGD-SR-FAQ-LPLANH--PQITVVDGG--DERADSVLAGLKAA--GDAQW 101 (236)
T ss_dssp TEEHHHHHHHHHHTSTTE-EEE--EEEECTTC-CS-GGG-SGGGGC--TTEEEEECC--SSHHHHHHHHHHTS--TTCSE
T ss_pred CEEHHHHHHHHHHhCCCC-CeE--EEEeCccH-HH-HHH-HHhcCC--CCEEEECCC--CCHHHHHHHHHHhc--CCCCE
Confidence 469999999999875432 233 33332111 11 112 222221 246666432 34444444455443 24799
Q ss_pred EEEECCCccCCChHHHHHHHHc
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~~ 403 (734)
++++++|.-+-++++++.|++.
T Consensus 102 ~lv~~~D~P~~~~~~i~~l~~~ 123 (236)
T 1i52_A 102 VLVHDAARPCLHQDDLARLLAL 123 (236)
T ss_dssp EEECCTTCTTCCHHHHHHHHGG
T ss_pred EEEEcCccccCCHHHHHHHHHH
Confidence 9999999865559999999974
No 96
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=28.74 E-value=2e+02 Score=28.92 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeeccchH-HHHHHHHHHhhchhhhhhhcCCCCCCCCC
Q psy14856 566 IVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLA-GVWAEFLRKYVVPLQEREFIGYHHEPVRA 644 (734)
Q Consensus 566 v~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~-~~~~~~l~~~v~P~~~~~f~~~~~~~l~~ 644 (734)
.++++.-++|.+.+..+|- +.+....++ ....+ +.+++.++.. .+.+...+ ..
T Consensus 26 ~l~~~~~~~l~~~l~~~Gv----------------------v~frg~~~~~~~~~~-~~~~~G~~~~--~~~~~~~~-~~ 79 (283)
T 1otj_A 26 PLSDNQFEQLYHAVLRHQV----------------------VFLRDQAITPQQQRA-LAQRFGELHI--HPVYPHAE-GV 79 (283)
T ss_dssp CCCHHHHHHHHHHHHHHSE----------------------EEECSCCCCHHHHHH-HHHTTSCBCC--CSSSCEET-TE
T ss_pred cCCHHHHHHHHHHHHHCCE----------------------EEECCCCCCHHHHHH-HHHHhCCCCc--CCCCCCCC-CC
Confidence 4688888899998888764 111111111 12222 3344555321 12111111 22
Q ss_pred cceeEEEEcCCC-CCCCCccccCC------ceEEEEEecCCCCcCCCccEEEee
Q psy14856 645 PMSFVVRYRPDE-QPSLRPHHDSS------TYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 645 ~~~fvvrY~~~~-~~~l~~H~D~S------~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
...+++.-.++. .....+|.|.| .+++.-|+..+. +||+|.|..
T Consensus 80 ~~i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~---~GG~T~~~d 130 (283)
T 1otj_A 80 DEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPS---TGGDTLWTS 130 (283)
T ss_dssp EEEEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCS---SCCCEEEEE
T ss_pred CeEEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCC---CCCcceeee
Confidence 245666665531 23457999998 689999998743 899999954
No 97
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=28.00 E-value=2e+02 Score=28.29 Aligned_cols=123 Identities=12% Similarity=0.090 Sum_probs=72.7
Q ss_pred CCCcEEEEEeecCCCchHHHH-----HHHHHHcCCcceeeccCcccCCCCCCCCCccchHHHHHHHHhhcCCCCCeEEEE
Q psy14856 30 DEDKFLVITVASNETDGYKRF-----IQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILV 104 (734)
Q Consensus 30 ~~~~l~vltvat~~~~~~~r~-----~~Sa~~~~y~~~vlg~g~~W~gg~~~~~ggg~Ki~~l~~~L~~~~~~~D~lvl~ 104 (734)
.++++++||-.+-..-.+.|- +..|+..||.+-+--+... +.+ --.+.-.|+-+||.++.++++ -.-+-.
T Consensus 4 ~~p~IllvtGs~p~ew~yl~ksiKNK~DYArrHGYelfy~d~~l~--k~~-e~a~eW~ksW~IR~AM~khPe--AEWfWW 78 (213)
T 2p6w_A 4 TTPCITILSGHFPKETIYARKTKELVEEYCSIHGYNFYYEESEPL--ETE-EHALHFRRSWIIQQAAEKFPS--TEWFLW 78 (213)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEECSCCS--CCS-HHHHHHTHHHHHHHHHHHCTT--CSEEEE
T ss_pred CCceEEEEeCCCCCCcHHHHHHHHHHHHHHHHcCCeEEEeecccc--cch-hhcccchhhHHHHHHHHHCCC--ceEEEE
Confidence 357788888776665544443 4789999998887422111 000 001112455589999999974 348999
Q ss_pred EeccceeEe-CCHHHHHHHHh---cCCCcEEEccCCcccCCCcCcccCCCCCCCCcccccceee--eeHHHHHHH
Q psy14856 105 TDSYDVIID-GGVNDILERFN---TFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFI--GYAKDIKEL 173 (734)
Q Consensus 105 vDsyDv~f~-~~~~~ll~rf~---~~~~~ilfsae~~cwP~~~l~~~yP~~~~g~R~LNSG~~i--G~a~~l~~l 173 (734)
.|+ |++|. ..++.=|++|. ..+- |+=+-+..-| +.+=||+|.|. --|-.|+..
T Consensus 79 LDs-DAlIMDmnf~lPLe~yldl~~~Nl-vvHGw~e~~~--------------~~~~lNtGvfL~~~~~~~irnc 137 (213)
T 2p6w_A 79 LDS-DVYVNPKNKNKPITSFIDLSDPNI-LYHTFHEAPW--------------GSYPINTGVKFVHKDALEIEKI 137 (213)
T ss_dssp ECT-TEEECGGGTTSCGGGTCCCCCTTC-CEEEECCTTT--------------SSSSCCTTEEEEEGGGHHHHHH
T ss_pred ecC-CceeecCCCCCcHHHccccccCce-eecccccccc--------------ccccccceeeeecccchhhhhc
Confidence 999 77777 34466678883 3333 3323333322 22349999998 444455554
No 98
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=27.87 E-value=2.7e+02 Score=24.54 Aligned_cols=84 Identities=11% Similarity=0.174 Sum_probs=52.8
Q ss_pred CCCcEEEEEEecCC-----hhHHHHHHHHHHcccCCCceEEEEEecCC-----CCcHHHHHHHHHHhccC--cceEEEEe
Q psy14856 289 QFPSVLISVFIDKP-----TAFLEEFLNKIANLNYPAKKISMFVYNNQ-----EYHAPLFDDYIHNFKTM--FKNVKYIA 356 (734)
Q Consensus 289 ~~P~V~I~I~i~n~-----~~~L~~fL~sL~~LdYPk~ri~l~I~ns~-----D~t~~il~~f~~~~~~~--y~~V~ii~ 356 (734)
.+..|.|+.|+|+. .+.+..|++.|...+....++.+|-..+. ....+.+++.+++.+-. ...+.+-.
T Consensus 49 ~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~~~ 128 (148)
T 3f6r_A 49 GYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKMEG 128 (148)
T ss_dssp TCSEEEEEECEECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEEES
T ss_pred cCCEEEEEecccCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEeec
Confidence 45689999999983 45789999999887777777766544222 33467777777776542 12344433
Q ss_pred CCCCCcHHHHHHHHHHh
Q psy14856 357 HNSTVNSKEARNLAVEN 373 (734)
Q Consensus 357 ~~~~~g~a~arN~al~~ 373 (734)
..+. ...++++.+-+.
T Consensus 129 ~p~~-~~~~~~~~~~~l 144 (148)
T 3f6r_A 129 DASN-DPEAVASFAEDV 144 (148)
T ss_dssp SGGG-CHHHHHHHHHHH
T ss_pred Ccch-HHHHHHHHHHHH
Confidence 3333 445555555443
No 99
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=27.77 E-value=1e+02 Score=33.02 Aligned_cols=95 Identities=8% Similarity=0.106 Sum_probs=53.5
Q ss_pred cCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHH-hcc----CcceEEEEeCCC----C---CcHHHHH
Q psy14856 300 DKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHN-FKT----MFKNVKYIAHNS----T---VNSKEAR 367 (734)
Q Consensus 300 ~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~-~~~----~y~~V~ii~~~~----~---~g~a~ar 367 (734)
-+..+.|...++++.+.. -+++.+ ..+. ..+.+++++.+ .+. ....++++.... . .|-+.+-
T Consensus 41 ~gk~pli~~~l~~l~~~g--i~~i~v--v~~~--~~~~i~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al 114 (420)
T 3brk_X 41 GGKARIIDFALSNALNSG--IRRIGV--ATQY--KAHSLIRHLQRGWDFFRPERNESFDILPASQRVSETQWYEGTADAV 114 (420)
T ss_dssp TTTEETHHHHHHHHHHTT--CCEEEE--EECT--TCHHHHHHHHHHSCCCCGGGTCEEEEECCC-------CCCCHHHHH
T ss_pred CCCCcHHHHHHHHHHhCC--CCeEEE--EeCC--ChHHHHHHHhhhhccccccccCCEEEeCccccccCCccccCCHHHH
Confidence 343489999999999864 234433 3221 12445555544 211 011366654321 2 5666666
Q ss_pred HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
..|++.......|+++++.+|.+. +..++.|++
T Consensus 115 ~~a~~~l~~~~~~~~lv~~~D~~~--~~~l~~l~~ 147 (420)
T 3brk_X 115 YQNIDIIEPYAPEYMVILAGDHIY--KMDYEYMLQ 147 (420)
T ss_dssp HTTHHHHHHHCCSEEEEEESSCEE--CBCTHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecccEEE--chHHHHHHH
Confidence 666665533346899999999954 334666665
No 100
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=26.93 E-value=1e+02 Score=31.20 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHh----------cc----------CcceEEEEeCCCCCc
Q psy14856 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNF----------KT----------MFKNVKYIAHNSTVN 362 (734)
Q Consensus 303 ~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~----------~~----------~y~~V~ii~~~~~~g 362 (734)
.|.|...++++.+.. -+++.+.+ + ...+.+++++.+. +. .-..+.++..++..|
T Consensus 45 kpli~~~l~~l~~~g--~~~i~vv~-~---~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~~~~G 118 (297)
T 2ux8_A 45 RPLIQYAVDEAVEAG--IEQMIFVT-G---RGKSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQEPMG 118 (297)
T ss_dssp EEHHHHHHHHHHHTT--CCEEEEEE-C---TTCHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECCSCCC
T ss_pred eEHHHHHHHHHHhCC--CCEEEEEe-C---CCHHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCCCCCC
Confidence 599999999999864 23453333 2 1123333333210 00 012466666666677
Q ss_pred HHHHHHHHHHhhhhcCccEEEEECCCccCCC-hHHHHHHHHc
Q psy14856 363 SKEARNLAVENSLHKGVDFYFYVDSDSHLDN-PDVLKYLVNR 403 (734)
Q Consensus 363 ~a~arN~al~~a~~~~~DYlf~vDAD~~L~n-p~tL~~LI~~ 403 (734)
-+.+-..|++.. ..|+++++.+|..++. +..++.|++.
T Consensus 119 t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~ 157 (297)
T 2ux8_A 119 LGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDA 157 (297)
T ss_dssp HHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHH
T ss_pred hHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHH
Confidence 776666666543 3589999999999743 5889999863
No 101
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=26.82 E-value=3.9e+02 Score=27.38 Aligned_cols=109 Identities=10% Similarity=0.136 Sum_probs=61.7
Q ss_pred CcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEecCC-------CCc----HHHHHHHHHHhccCcceEEEEeCCC
Q psy14856 291 PSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQ-------EYH----APLFDDYIHNFKTMFKNVKYIAHNS 359 (734)
Q Consensus 291 P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~-------D~t----~~il~~f~~~~~~~y~~V~ii~~~~ 359 (734)
+.+.+...+++...-++..++++..-. ..+|.+|+..|+ ..| .+.+++.++..+..-..|.+-....
T Consensus 67 ~~~~i~~l~~~~~~di~~a~~~~~~ag--~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~ 144 (293)
T 3ewb_X 67 KHCSVTGLARCVEGDIDRAEEALKDAV--SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDA 144 (293)
T ss_dssp CSSEEEEEEESSHHHHHHHHHHHTTCS--SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETG
T ss_pred CCCEEEEEecCCHHHHHHHHHHHhhcC--CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccC
Confidence 345556666666677888888876533 457888876432 112 2223333322222222444432221
Q ss_pred C-CcHHHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc
Q psy14856 360 T-VNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 360 ~-~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~ 403 (734)
. ......... ++.+.+..++.+-+.|.--..+ |..+..|++.
T Consensus 145 ~~~~~~~~~~~-~~~~~~~G~~~i~l~DT~G~~~-P~~v~~lv~~ 187 (293)
T 3ewb_X 145 TRSDRAFLIEA-VQTAIDAGATVINIPDTVGYTN-PTEFGQLFQD 187 (293)
T ss_dssp GGSCHHHHHHH-HHHHHHTTCCEEEEECSSSCCC-HHHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEecCCCCCCC-HHHHHHHHHH
Confidence 1 222222222 2344457899999999999998 9999999864
No 102
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=26.10 E-value=1.7e+02 Score=28.28 Aligned_cols=87 Identities=9% Similarity=0.102 Sum_probs=53.7
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..+.|...++++.+..- ++ +|..+.+ .++++. .+++ ....|-+.+-..|++.. . |+
T Consensus 31 g~pll~~~l~~l~~~~~---~i--vvv~~~~----~i~~~~--------~~~~---~~~~g~~~~i~~a~~~~---~-~~ 86 (232)
T 2dpw_A 31 GRPMVEWVLEALYAAGL---SP--VYVGENP----GLVPAP--------ALTL---PDRGGLLENLEQALEHV---E-GR 86 (232)
T ss_dssp TEETHHHHHHHHHHTTC---EE--EEESCCS----SCSSCC--------SEEE---CCCSSHHHHHHHHHHTC---C-SE
T ss_pred CEEHHHHHHHHHHhcCC---EE--EEEeChH----HHhhhc--------CeEe---cCCCCHHHHHHHHHHHc---C-CC
Confidence 46999999999988753 44 3433221 121111 4555 34556666555665543 3 89
Q ss_pred EEEECCCccCCChHHHHHHHHc--CCceeeecc
Q psy14856 382 YFYVDSDSHLDNPDVLKYLVNR--NESLIAPLL 412 (734)
Q Consensus 382 lf~vDAD~~L~np~tL~~LI~~--nk~IVaP~l 412 (734)
++++++|.-+-++++++.|++. +..++.|..
T Consensus 87 ~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~ 119 (232)
T 2dpw_A 87 VLVATGDIPHLTEEAVRFVLDKAPEAALVYPIV 119 (232)
T ss_dssp EEEEETTCTTCCHHHHHHHHHHCCSCSEEEEEE
T ss_pred EEEEeCCcccCCHHHHHHHHhcCCCCCEEEEEe
Confidence 9999999964449999999973 234544543
No 103
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=24.17 E-value=2.2e+02 Score=30.45 Aligned_cols=97 Identities=10% Similarity=0.055 Sum_probs=53.7
Q ss_pred EecCChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHH-hccCc------ceEEEEeCCC-------CCcH
Q psy14856 298 FIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHN-FKTMF------KNVKYIAHNS-------TVNS 363 (734)
Q Consensus 298 ~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~-~~~~y------~~V~ii~~~~-------~~g~ 363 (734)
|+-+..+.|...+++|.+... .++.+.+ . . .. +.+++++.+ .+... ..++++..+. ..|-
T Consensus 47 pi~g~~pli~~~l~~l~~~g~--~~i~vv~-~-~-~~-~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 120 (451)
T 1yp2_A 47 PLGANYRLIDIPVSNCLNSNI--SKIYVLT-Q-F-NS-ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGT 120 (451)
T ss_dssp EETTTEETTHHHHHHHHHTTC--CEEEEEE-S-C-CC-HHHHHHHHHHCC--------CCEEEEEESCSSTTSCCCCCSH
T ss_pred EECCcceeHHHHHHHHHHCCC--CEEEEEe-c-c-CH-HHHHHHHhhhhhcccccccccCcEEEecccccccccccccCc
Confidence 334444899999999988642 3443322 2 1 12 233333332 21011 1255653211 2566
Q ss_pred HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH
Q psy14856 364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN 402 (734)
Q Consensus 364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~ 402 (734)
+.+-..|++.......|+++++.+|.+.. . .++.|++
T Consensus 121 ~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~-~l~~l~~ 157 (451)
T 1yp2_A 121 ADAVRQYLWLFEEHTVLEYLILAGDHLYR-M-DYEKFIQ 157 (451)
T ss_dssp HHHHHHTHHHHTTSCCSEEEEECSCEECC-C-CHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEecCcEEEc-C-CHHHHHH
Confidence 66666676655333468999999999653 3 4777775
No 104
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=24.04 E-value=37 Score=33.40 Aligned_cols=19 Identities=16% Similarity=0.565 Sum_probs=17.2
Q ss_pred cCccEEEEECCCccCCChH
Q psy14856 377 KGVDFYFYVDSDSHLDNPD 395 (734)
Q Consensus 377 ~~~DYlf~vDAD~~L~np~ 395 (734)
.+++|++.+|+|++++|++
T Consensus 71 PeAEWfWWLDsDAlIMDmn 89 (213)
T 2p6w_A 71 PSTEWFLWLDSDVYVNPKN 89 (213)
T ss_dssp TTCSEEEEECTTEEECGGG
T ss_pred CCceEEEEecCCceeecCC
Confidence 8999999999999999655
No 105
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=23.69 E-value=3e+02 Score=26.13 Aligned_cols=91 Identities=7% Similarity=0.142 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccE
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDF 381 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DY 381 (734)
..|.|...++++.+...- ++ ++|..+. ...++.+.+....+ ..+.++.+ ..+...+-..|++.+. ...++
T Consensus 31 g~pli~~~l~~l~~~~~~-~~--ivvv~~~-~~~~~~~~~~~~~~---~~v~~~~~--~~~~~~sv~~al~~~~-~~~~~ 100 (228)
T 2yc3_A 31 GQPIALYSFFTFSRMPEV-KE--IVVVCDP-FFRDIFEEYEESID---VDLSFAIP--GKERQDSVYSGLQEID-VNSEL 100 (228)
T ss_dssp TEEHHHHHHHHHHHCTTE-EE--EEEECCG-GGHHHHHTTTTTSS---SEEEEECC--CSSHHHHHHHHHTTSC-TTCSE
T ss_pred CEEHHHHHHHHHHcCCCC-Ce--EEEEECh-HHHHHHHHHHHhCC---CcEEEECC--CCCHHHHHHHHHHhhc-cCCCE
Confidence 468999999999876321 23 3343321 22233333322111 24555543 2344444444554332 24689
Q ss_pred EEEECCCc-cCCChHHHHHHHHc
Q psy14856 382 YFYVDSDS-HLDNPDVLKYLVNR 403 (734)
Q Consensus 382 lf~vDAD~-~L~np~tL~~LI~~ 403 (734)
++.+|+|. +++ +++++.|++.
T Consensus 101 vl~~d~d~P~~~-~~~i~~l~~~ 122 (228)
T 2yc3_A 101 VCIHDSARPLVN-TEDVEKVLKD 122 (228)
T ss_dssp EEEEETTCTTCC-HHHHHHHHHH
T ss_pred EEEecCCCccCC-HHHHHHHHHH
Confidence 99999997 555 9999999963
No 106
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=22.45 E-value=63 Score=32.50 Aligned_cols=33 Identities=15% Similarity=-0.015 Sum_probs=26.1
Q ss_pred CCCCccccCC------ceEEEEEecCCCCcCCCccEEEee
Q psy14856 658 PSLRPHHDSS------TYTINIALNQVGVDYEGGGCRFIR 691 (734)
Q Consensus 658 ~~l~~H~D~S------~~T~ni~Ln~~~~dfeGGg~~F~~ 691 (734)
..+.+|.|.| .+++.-|+..+. +=+||+|.|..
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~-~~~GG~T~~~d 134 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKN-VKFRGATTVCD 134 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEES-CSSSSCEEEEE
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCC-CCCCCcchhhh
Confidence 4688999998 799999997631 22799999964
No 107
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=22.17 E-value=48 Score=35.08 Aligned_cols=84 Identities=11% Similarity=0.179 Sum_probs=53.5
Q ss_pred ChhHHHHHHHHHHcccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCC-CCcHHHHHHHHHHhhhhcCcc
Q psy14856 302 PTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNS-TVNSKEARNLAVENSLHKGVD 380 (734)
Q Consensus 302 ~~~~L~~fL~sL~~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~-~~g~a~arN~al~~a~~~~~D 380 (734)
..+.|+..+++|.+.. -+++. |..+.+ +++++.+.. ..++++..++ ..+.+. ++..+++ .|
T Consensus 30 g~pli~~~l~~l~~~~--~~~i~--vv~~~~-----i~~~~~~~~---~~i~~~~~~~~~~g~~~----~l~~~~~--~~ 91 (401)
T 2ggo_A 30 SKPLIEYQIEYLRKCG--IRDIT--VIVSSK-----NKEYFEKKL---KEISIVTQKDDIKGTGA----AILSAKF--ND 91 (401)
T ss_dssp TEEHHHHHHHHHHHTT--CCEEE--EEECGG-----GHHHHHHHC---TTCEEEECCTTCCBSTT----TGGGCCC--SS
T ss_pred CEeHHHHHHHHHHHCC--CCEEE--EEeCHH-----HHHHhhccC---CcEEEEeCCCCCCChHH----HHHHhcc--CC
Confidence 3599999999999875 23443 333222 444444332 2466666554 344332 3333332 68
Q ss_pred EEEEECCCccCCChHHHHHHHHc
Q psy14856 381 FYFYVDSDSHLDNPDVLKYLVNR 403 (734)
Q Consensus 381 Ylf~vDAD~~L~np~tL~~LI~~ 403 (734)
+++++.+|..+.++..|+.|++.
T Consensus 92 ~~lv~~~D~~~~~~~~~~~l~~~ 114 (401)
T 2ggo_A 92 EALIIYGDLFFSNEKEICNIITL 114 (401)
T ss_dssp EEEEEETTEEESCSHHHHHHTTC
T ss_pred CEEEEeCccccccHHHHHHHHHh
Confidence 99999999998778999999984
No 108
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=22.13 E-value=1e+02 Score=31.77 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=34.3
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCC-hHHHHHHHH
Q psy14856 351 NVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDN-PDVLKYLVN 402 (734)
Q Consensus 351 ~V~ii~~~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~n-p~tL~~LI~ 402 (734)
.+.++..++..|-+.+-..|++... ...|+++++.+|..+ + +..++.|++
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~-~~~d~~lv~~~D~~~-~~~~~l~~l~~ 156 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLD-DDEDVVAVMLPDDLV-LPTGVMERMAQ 156 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSC-SSCCEEEEECTTEEE-ESSCHHHHHHH
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhc-CCCCeEEEEeCCccc-CchHHHHHHHH
Confidence 4555655556676666555554432 234679999999999 6 789999986
No 109
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=22.03 E-value=6.8 Score=25.10 Aligned_cols=15 Identities=60% Similarity=1.533 Sum_probs=10.4
Q ss_pred ccccccccccCCcccc
Q psy14856 418 AWSNFWGALNADGFYA 433 (734)
Q Consensus 418 ~wsNFWgal~~~GyY~ 433 (734)
.|.|||..+. .|||.
T Consensus 2 awknfwsslr-kgfyd 16 (26)
T 2khf_A 2 AWKNFWSSLR-KGFYD 16 (26)
T ss_dssp CHHHHHHHHH-HHHTT
T ss_pred cHHHHHHHHH-hhccc
Confidence 5899998763 35653
Done!