BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14858
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 43/414 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEK----RRRIARKYCSPRIIS 56
+G +V+N ++++KE L+ Q +F L + + + R R + R ++
Sbjct: 55 LGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLA 114
Query: 57 SNY---------QLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLC 107
N SKI L ET AI + K L+ +A SN+ +
Sbjct: 115 VNSFRYFGYGQKSFESKI-LEETKFFNDAIET---YKGRPFDFKQLITNAVSNITNLIIF 170
Query: 108 STRFDYEDKQLQTMVRNFDEIFYEINQGHPV---DFLPWLNPF-FSKHMNKIAGWANEIR 163
RF YED Q M+ F E E+ V + PW+ F KH A +
Sbjct: 171 GERFTYEDTDFQHMIELFSENV-ELAASASVFLYNAFPWIGILPFGKHQQLFRNAA--VV 227
Query: 164 EIMLERIIKQHLDTVDYDDH-PRDFTDALLQYFREDEE-----LSWDHIMFDL-EDFIGG 216
L R+I++ +V+ P+ F DA L + + S ++++F + E I G
Sbjct: 228 YDFLSRLIEK--ASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG 285
Query: 217 HAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRI 276
N++ ++++ P+ ++++EID + G DDK KMPYTEA++ E LR
Sbjct: 286 TETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRF 345
Query: 277 CASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQD 332
C IVP H +ED V GYS+ KGT VI N + ++ + YW +P F PERF+
Sbjct: 346 CN--IVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS 403
Query: 333 GIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVP 386
G K +PF G+R C+G+ L F+ T++L + + +P+ +LVP
Sbjct: 404 GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH----ELVP 453
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 43/414 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEK----RRRIARKYCSPRIIS 56
+G +V+N ++++KE L+ Q +F L + + + R R + R ++
Sbjct: 55 LGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLA 114
Query: 57 SNY---------QLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLC 107
N SKI L ET AI + K L+ +A SN+ +
Sbjct: 115 VNSFRYFGYGQKSFESKI-LEETKFFNDAIET---YKGRPFDFKQLITNAVSNITNLIIF 170
Query: 108 STRFDYEDKQLQTMVRNFDEIFYEINQGHPV---DFLPWLNPF-FSKHMNKIAGWANEIR 163
RF YED Q M+ F E E+ V + PW+ F KH A +
Sbjct: 171 GERFTYEDTDFQHMIELFSENV-ELAASASVFLYNAFPWIGILPFGKHQQLFRNAA--VV 227
Query: 164 EIMLERIIKQHLDTVDYDDH-PRDFTDALLQYFREDEE-----LSWDHIMFDL-EDFIGG 216
L R+I++ +V+ P+ F DA L + + S ++++F + E I G
Sbjct: 228 YDFLSRLIEK--ASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG 285
Query: 217 HAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRI 276
N++ ++++ P+ ++++EID + G DDK KMPYTEA++ E LR
Sbjct: 286 TETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRF 345
Query: 277 CASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQD 332
C IVP H +ED V GYS+ KGT VI N + ++ + YW +P F PERF+
Sbjct: 346 CN--IVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS 403
Query: 333 GIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVP 386
G K +PF G+R C+G+ L F+ T++L + + +P+ +LVP
Sbjct: 404 GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH----ELVP 453
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 197/418 (47%), Gaps = 35/418 (8%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALC---------------DWSSLQEKRRRI 45
+G+TP +V++ + I++ L+ QG F G L D + RRR+
Sbjct: 51 IGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRL 110
Query: 46 ARKYCSPRIISSNYQLMSKISL-----IETPILLKAIHKRILSGNKSVKIKPLLQSAFSN 100
A+ I+S+ + L E +L+ + + +++G + + +N
Sbjct: 111 AQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQE-LMAGPGHFNPYRYVVVSVTN 169
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWAN 160
+ R+D+ ++L ++V + + G+P DF+P L + +N N
Sbjct: 170 VICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKD-LN 228
Query: 161 EIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDE-------ELSWDHIMFDLEDF 213
E +++++K+H T + H RD TD+L+++ +E + +LS + I+ + D
Sbjct: 229 EKFYSFMQKMVKEHYKTFE-KGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDL 287
Query: 214 IG-GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
G G + + L+YL+ NP KI++E+D V G R + D+ +PY EA + E
Sbjct: 288 FGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILE 347
Query: 273 TLRICA-SPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
T R + P +PH T DT++ G+ + KG V +N + +N W P++F PERF++
Sbjct: 348 TFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLT 407
Query: 331 QDGIVVK--PSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVP 386
DG + K I FG GKR CIG+ + F+ + +L + S P ++ + P
Sbjct: 408 PDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTP 465
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 216/441 (48%), Gaps = 48/441 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG---------------PLALCDWSSLQEKRRRI 45
MGT ++V +L KE+LI +G F G +A D + + RR+
Sbjct: 50 MGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRL 109
Query: 46 ARKYCSPRIISSNYQLMSKISLIETPIL--LKAIHKRILSGNKSVKIKPLLQSAFSNMFT 103
A + + Q + KI E L + A H +S+ I + A +N+ +
Sbjct: 110 AMATFA--LFKDGDQKLEKIICQEISTLCDMLATHN-----GQSIDISFPVFVAVTNVIS 162
Query: 104 QYLCSTRFDYEDKQLQTMVRNFDE-IFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEI 162
+T + D +L +++N++E I +++ VD +PWL F +K + K+ +I
Sbjct: 163 LICFNTSYKNGDPEL-NVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHV-KI 220
Query: 163 REIMLERIIKQHLDTVDYDDHPRDFTDALLQYF-----------REDEELSWDHIMFDLE 211
R +L +I++ + + D + D L+Q ++ E LS +HI+ +
Sbjct: 221 RNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIG 279
Query: 212 DFIG-GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALV 270
D G G ++V L +L+ NP K+ +EID G R + D+ ++ EA +
Sbjct: 280 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATI 339
Query: 271 FETLRI--CASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERF 328
E LR+ A ++PH A D+++ ++V KGT VI+N + L+ ++ W +P +F PERF
Sbjct: 340 REVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 329 ISQDGI-VVKPS-HFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN---MDELK 383
++ G ++ PS ++PFG G R+CIG+ L F+++ +L +D+ P+ + L+
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 459
Query: 384 LVPACVALPAETYELEFTLRK 404
+P V L ++++++ +R+
Sbjct: 460 GIPKVVFL-IDSFKVKIKVRQ 479
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 177/414 (42%), Gaps = 58/414 (14%)
Query: 4 TPCIVVNSFELIKEILIVQGS-------------LFGGPLA----LCDWSSLQEKRRRIA 46
TP +V+N ++E L+ G L GP + L + ++RR +
Sbjct: 54 TPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFS 113
Query: 47 RKYCSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYL 106
+ R + + + + E L A + + LL A SN+
Sbjct: 114 --VSTLRNLGLGKKSLEQWVTEEAACLCAAFANH---SGRPFRPNGLLDKAVSNVIASLT 168
Query: 107 CSTRFDYEDKQL-------QTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWA 159
C RF+Y+D + Q ++ E+ PVD +H+ +AG
Sbjct: 169 CGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVD----------RHIPALAGKV 218
Query: 160 NEIRE---IMLERIIKQHLDTVDYDDHPRDFTDALL---QYFREDEELSWDH-----IMF 208
++ L+ ++ +H T D PRD T+A L + + + E S++ ++
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
DL F G + L+ ++ +P +++QEID V G +R M D+ MPYT A
Sbjct: 279 DL--FSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTA 336
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R IVP H+ + D V G+ + KGT +I N + + W++P +F
Sbjct: 337 VIHEVQRF--GDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN 378
PE F+ G VKP F+PF G+R C+G+ L F+ TS+L H+ S P
Sbjct: 395 PEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPT 448
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 34/417 (8%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLAL---------------CDWSSLQEKRRRI 45
+G+TP +V++ + I++ L+ QG F G L D + RRR+
Sbjct: 56 IGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRL 115
Query: 46 ARKYCSPRIISSNYQLMSKISLIE-TPILLKAIHKRI---LSGNKSVKIKPLLQSAFSNM 101
A+ + I+S+ S L E KA+ R+ ++G + + +N+
Sbjct: 116 AQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANV 175
Query: 102 FTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANE 161
F ++ ++V+N E + G+P+DF P L + + + + N+
Sbjct: 176 IGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAF-NQ 234
Query: 162 IREIMLERIIKQHLDTVDYDDHP-RDFTDALLQYFREDEELSW-----DHIMFDLEDFIG 215
L++ +++H D+D + RD T AL ++ ++ S + I+ + D G
Sbjct: 235 RFLWFLQKTVQEHYQ--DFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFG 292
Query: 216 -GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETL 274
G + + L+YL+ P KI++E+D V G R + D+ ++PY EA + ET
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETF 352
Query: 275 RICA--SPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQD 332
R + +PH T DTT+ G+ + K V +N + +N W++P++F+PERF++ D
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTAD 412
Query: 333 GIVV-KP--SHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVP 386
G + KP + FG GKR CIG+ L F+ + +L + S P ++ L P
Sbjct: 413 GTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTP 469
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 193/431 (44%), Gaps = 45/431 (10%)
Query: 2 GTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIARKYCSPRIISSNYQL 61
G P +V + +E +KE LI G F G +RI + IISSN +
Sbjct: 52 GMNPIVVFHGYEAVKEALIDNGEEFSG-------RGNSPISQRITKGLG---IISSNGKR 101
Query: 62 MSKISLIETPILL------KAIHKRI----------LSGNKSVKIKP--LLQSAFSNMFT 103
+I L ++I R+ L K+ P +L A N+
Sbjct: 102 WKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVIC 161
Query: 104 QYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAGWANE 161
+ RFDY+D+ T+++ F+E F +N + P L F NK+
Sbjct: 162 SVVFQKRFDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVAL 221
Query: 162 IREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDE-----ELSWDHIMFDLED-FIG 215
R + E++ K+H ++D ++ PRDF D L +++ E + ++++ + D F+
Sbjct: 222 TRSYIREKV-KEHQASLDVNN-PRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVA 279
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR 275
G + L+ L+K+P K+++EID V G R CM D+ MPYT+A+V E R
Sbjct: 280 GTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQR 339
Query: 276 IC--ASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDG 333
VPH T DT Y + KGT ++ + D + P F P F+ ++G
Sbjct: 340 YSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNG 399
Query: 334 IVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVS----YPNMDELKLVPACV 389
K +F+PF GKR C G+ L F+ +T+IL ++++ N++ + V
Sbjct: 400 NFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIV 459
Query: 390 ALPAETYELEF 400
+LP +Y++ F
Sbjct: 460 SLPP-SYQICF 469
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 48/444 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLF--------------GGPLALCDWSSLQEKRRRIA 46
+G+ P +V+N I + L+ QGS F G +A +S + +RR A
Sbjct: 49 LGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAA 108
Query: 47 RKYC------SPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSN 100
PR + Q++ L E L+ A+ R + + +PL A +N
Sbjct: 109 HSMMRNFFTRQPR----SRQVLEGHVLSEARELV-ALLVRGSADGAFLDPRPLTVVAVAN 163
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPF---FSKHMNKIAG 157
+ + R+ ++D + + ++ + +E + G VD +PWL F +
Sbjct: 164 VMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQ 223
Query: 158 WANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDH----IMFDLED- 212
+L++ ++ H +++ PRD DA + +++ + D DLE+
Sbjct: 224 LNRNFSNFILDKFLR-HCESLRPGAAPRDMMDAFI--LSAEKKAAGDSHGGGARLDLENV 280
Query: 213 -------FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPY 265
F L + +L+ + P +++ E+D V G R CM D+ +PY
Sbjct: 281 PATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPY 340
Query: 266 TEALVFETLRICA-SPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKF 323
A ++E +R + P+ +PH T +T+V GY + K TVV +N + +N L W P F
Sbjct: 341 VLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENF 400
Query: 324 KPERFISQDGIVVK--PSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV-SYPNMD 380
P RF+ +DG++ K S + F GKR CIG++L F+ I+ + + D + PN
Sbjct: 401 DPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP 460
Query: 381 ELKLVPACVALPAETYELEFTLRK 404
+ + +++++ TLR+
Sbjct: 461 AKMNFSYGLTIKPKSFKVNVTLRE 484
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 175/414 (42%), Gaps = 58/414 (14%)
Query: 4 TPCIVVNSFELIKEILIVQGS-------------LFGGPLA----LCDWSSLQEKRRRIA 46
TP +V+N ++E L+ G L GP + L + ++RR +
Sbjct: 54 TPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFS 113
Query: 47 RKYCSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYL 106
+ R + + + + E L A + + LL A SN+
Sbjct: 114 --VSTLRNLGLGKKSLEQWVTEEAACLCAAFANH---SGRPFRPNGLLDKAVSNVIASLT 168
Query: 107 CSTRFDYEDKQL-------QTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWA 159
C RF+Y+D + Q ++ E+ PV H+ +AG
Sbjct: 169 CGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLL----------HIPALAGKV 218
Query: 160 NEIRE---IMLERIIKQHLDTVDYDDHPRDFTDALL---QYFREDEELSWDH-----IMF 208
++ L+ ++ +H T D PRD T+A L + + + E S++ ++
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
DL F G + L+ ++ +P +++QEID V G +R M D+ MPYT A
Sbjct: 279 DL--FSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTA 336
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R IVP H+ + D V G+ + KGT +I N + + W++P +F
Sbjct: 337 VIHEVQRF--GDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN 378
PE F+ G VKP F+PF G+R C+G+ L F+ TS+L H+ S P
Sbjct: 395 PEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPT 448
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 26/300 (8%)
Query: 93 LLQSAFSNMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLN-----PF 147
L+ A N+ L FDY D++ ++ F+E F+ ++ PWL P
Sbjct: 150 LIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLST-------PWLQLYNNFPS 202
Query: 148 FSKHM----NKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEE--- 200
F ++ K+ E++E + ER+ K+H ++D + PRD TD LL +++
Sbjct: 203 FLHYLPGSHRKVIKNVAEVKEYVSERV-KEHHQSLD-PNCPRDLTDCLLVEMEKEKHSAE 260
Query: 201 --LSWDHIMFDLED-FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCM 257
+ D I + D F G + L+ LMK P +K+ +EID V G R +
Sbjct: 261 RLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAI 320
Query: 258 DDKYKMPYTEALVFETLR-ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL 315
D+ +MPY +A+V E R I P +PH AT DT GY + KGTVV+ + +
Sbjct: 321 KDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQ 380
Query: 316 YWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVS 375
+ +P KFKPE F++++G +F PF TGKR C G+ L F+++ +IL H+++
Sbjct: 381 EFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 195/437 (44%), Gaps = 49/437 (11%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G P +++ E I+E L+ + F G +A+ D R Y +
Sbjct: 51 LGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDP---------FFRGYGVIFANGNR 101
Query: 59 YQLMSKISLI---ETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSNMFT 103
++++ + S+ + + +++ +RI L +K + P L QS +N+
Sbjct: 102 WKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIIC 161
Query: 104 QYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIR 163
+ RF Y+D++ M+ F + F I+ L FS + G ++
Sbjct: 162 SIVFGKRFHYQDQEFLKMLNLFYQTFSLIS-----SVFGQLFELFSGFLKHFPGAHRQVY 216
Query: 164 EIMLE------RIIKQHLDTVDYDDHPRDFTDALLQYFREDE-----ELSWDHIMFD-LE 211
+ + E +++H +T+D PRD D L + +++ E S ++ + L
Sbjct: 217 KNLQEINAYIGHSVEKHRETLD-PSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLS 275
Query: 212 DFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVF 271
F G + + ++K PH +++ +EI+ V G R + D+ KMPYTEA+++
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIY 335
Query: 272 ETLRIC-ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
E R P+ VPH+ T+ T+ GY + K T V L Y+++P F P+ F+
Sbjct: 336 EIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFL 395
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDE-LKLVPA- 387
+G + K FIPF GKR C+G+ + F+ T+IL ++ ++ P E + L P
Sbjct: 396 DANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQE 455
Query: 388 -CVALPAETYELEFTLR 403
V TY++ F R
Sbjct: 456 CGVGKIPPTYQIRFLPR 472
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 193/427 (45%), Gaps = 52/427 (12%)
Query: 2 GTTPCIVVNSFELIKEILIVQGSLFGG----PLALCDWSSLQEKRRRIARKYCSPRIISS 57
G P +V++ +E +KE LI G F G PLA R R + I+ S
Sbjct: 51 GLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA-----------ERANRGFG---IVFS 96
Query: 58 N------YQLMSKISLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFS 99
N + S ++L + ++I R+ L K+ P +L A
Sbjct: 97 NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPC 156
Query: 100 NMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAG 157
N+ + RFDY+D+Q ++ +E ++ + P L +F NK+
Sbjct: 157 NVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLK 216
Query: 158 WANEIREIMLERIIKQHLDTVDYDDHPRDFTDA-LLQYFREDEELSWDHIMFDLED---- 212
++ +LE++ K+H +++D ++ P+DF D L++ +E + + LE+
Sbjct: 217 NVAFMKSYILEKV-KEHQESMDMNN-PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVD 274
Query: 213 -FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVF 271
F G + L+ L+K+P K+++EI+ V G R CM D+ MPYT+A+V
Sbjct: 275 LFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVH 334
Query: 272 ETLR-ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
E R I P +PH T D Y + KGT ++++ + + + P F P F+
Sbjct: 335 EVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 394
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD----VSYPNMDELKLV 385
+ G K +F+PF GKR C+G+ L F+ +TSIL +++ V N+D +V
Sbjct: 395 DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVV 454
Query: 386 PACVALP 392
++P
Sbjct: 455 NGFASVP 461
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 67/442 (15%)
Query: 2 GTTPCIVVNSFELIKEILIVQGSLFGG----PLALCDWSSLQEKRRRIARKYCSPRIISS 57
G P +V++ +E +KE LI G F G PLA R R + I+ S
Sbjct: 53 GLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA-----------ERANRGFG---IVFS 98
Query: 58 N------YQLMSKISLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFS 99
N + S ++L + ++I R+ L K+ P +L A
Sbjct: 99 NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPC 158
Query: 100 NMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLN---------PFFSK 150
N+ + RFDY+D+Q ++ +E ++ PW+ +F
Sbjct: 159 NVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSS-------PWIQICNNFSPIIDYFPG 211
Query: 151 HMNKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDA-LLQYFREDEELSWDHIMFD 209
NK+ ++ +LE++ K+H +++D ++ P+DF D L++ +E + +
Sbjct: 212 THNKLLKNVAFMKSYILEKV-KEHQESMDMNN-PQDFIDCFLMKMEKEKHNQPSEFTIES 269
Query: 210 LED-----FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMP 264
LE+ F G + L+ L+K+P K+++EI+ V G R CM D+ MP
Sbjct: 270 LENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMP 329
Query: 265 YTEALVFETLR-ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTK 322
YT+A+V E R I P +PH T D Y + KGT ++++ + + + P
Sbjct: 330 YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEM 389
Query: 323 FKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD----VSYPN 378
F P F+ + G K +F+PF GKR C+G+ L F+ +TSIL +++ V N
Sbjct: 390 FDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKN 449
Query: 379 MDELKLVPACVALPAETYELEF 400
+D +V ++P Y+L F
Sbjct: 450 LDTTPVVNGFASVPP-FYQLCF 470
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 199/428 (46%), Gaps = 40/428 (9%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIARKYCSPRIISSNYQ 60
+G P +V++ +E +KE L+ G F G ++ L++ + + + + + ++
Sbjct: 51 LGMKPTVVLHGYEAVKEALVDLGEEFAGRGSV---PILEKVSKGLGIAFSN----AKTWK 103
Query: 61 LMSKISLIET---PILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSNMFTQY 105
M + SL+ + ++I RI L + P +L A N+
Sbjct: 104 EMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSV 163
Query: 106 LCSTRFDYEDKQLQTMVRNFDEIFYEINQGHP----VDFLPWLNPFFSKHMNKIAGWANE 161
+ RFDY+D++ ++ + E + G P + P L +F + A+
Sbjct: 164 IFHNRFDYKDEEFLKLMESLHENVELL--GTPWLQVYNNFPALLDYFPGIHKTLLKNADY 221
Query: 162 IREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDE--ELSWDHIMFDLEDFIG-GHA 218
I+ ++E++ K+H +D ++ PRDF D L ++ E + + ++ + D G G
Sbjct: 222 IKNFIMEKV-KEHQKLLDVNN-PRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTE 279
Query: 219 ALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR-IC 277
+ L+ L+K+P ++++EI+ V G R CM D+ +MPYT+A++ E R I
Sbjct: 280 TTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFID 339
Query: 278 ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVV 336
P +PH T D Y + KGT +I + + + + P F P F+ + G
Sbjct: 340 LLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFK 399
Query: 337 KPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD----VSYPNMDELKLVPACVALP 392
K +F+PF GKR C+G+ L F+ +TSIL ++ V ++D +V V++P
Sbjct: 400 KSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDITAVVNGFVSVP 459
Query: 393 AETYELEF 400
+Y+L F
Sbjct: 460 P-SYQLCF 466
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 184/405 (45%), Gaps = 48/405 (11%)
Query: 2 GTTPCIVVNSFELIKEILIVQGSLFGG----PLALCDWSSLQEKRRRIARKYCSPRIISS 57
G +V++ +E++KE LI G F G PLA R R + I+ S
Sbjct: 53 GLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLA-----------ERANRGFG---IVFS 98
Query: 58 N------YQLMSKISLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFS 99
N + S ++L + ++I R+ L K+ P +L A
Sbjct: 99 NGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPC 158
Query: 100 NMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAG 157
N+ + RFDY+D+Q ++ +E ++ + P + +F NK+
Sbjct: 159 NVICSIIFQKRFDYKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLK 218
Query: 158 WANEIREIMLERIIKQHLDTVDYDDHPRDFTDALL-----QYFREDEELSWDHIMFDLED 212
+ +LE++ K+H +++D ++ PRDF D L + + E + ++++ D
Sbjct: 219 NLAFMESDILEKV-KEHQESMDINN-PRDFIDCFLIKMEKEKQNQQSEFTIENLVITAAD 276
Query: 213 FIG-GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVF 271
+G G + L+ L+K+P K+++EI+ V G R CM D+ MPYT+A+V
Sbjct: 277 LLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVH 336
Query: 272 ETLR-ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
E R I P +PH T D Y + KGT ++ + + + + P F P F+
Sbjct: 337 EVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL 396
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV 374
+ G K ++F+PF GKR C+G+ L F+ +T IL ++++
Sbjct: 397 DEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNL 441
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 45/435 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCD-----WSSL--QEKRRRIARKY-- 49
+G+ P +V+ + I+E L+ Q F G +A+ D + + +R R R++
Sbjct: 51 LGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSL 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
+ R + + + E L++ + K S + L S SN+ +
Sbjct: 111 ATMRDFGMGKRSVEERIQEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGK 167
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLE- 168
RFDY+D +R D + + F + FS + G +I + E
Sbjct: 168 RFDYKDP---VFLRLLD--LFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEI 222
Query: 169 -----RIIKQHLDTVDYDDHPRDFTDALLQYFREDEE---LSWDH---IMFDLEDFIGGH 217
+ +++H T+D +PRDF D L +D+ + H I+ L F G
Sbjct: 223 NTFIGQSVEKHRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGT 281
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRIC 277
+ + ++K PH +++++EI+ V G R +DD+ KMPYT+A++ E R+
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341
Query: 278 -ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL----YWDEPTKFKPERFISQ 331
P VPH T+DT GY + K T V F + +S L Y++ P F P F+
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEV----FPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP-NMDELKLVP--AC 388
+G + + F+PF GKR C+G+ + F+ T+IL ++ ++ P +++ L P +
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG 457
Query: 389 VALPAETYELEFTLR 403
V +Y++ F R
Sbjct: 458 VGNVPPSYQIRFLAR 472
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 56/408 (13%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G +V+ + ++E L+ Q F G A DW + + Y ++ SN
Sbjct: 51 LGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW---------VFKGYG---VVFSN 98
Query: 59 YQLMSKI------SLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSN 100
+ ++ +L + + + I +RI L G I P L SN
Sbjct: 99 GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN 158
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWAN 160
+ + + RFDY+DK+ +++R IF + L FS M + G
Sbjct: 159 VISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTS-----TGQLYEMFSSVMKHLPGPQQ 213
Query: 161 EIREIM--LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWDHIMF 208
+ +++ LE I + ++ T+D + PRDF D+ L +E+E+ + +M
Sbjct: 214 QAFQLLQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMT 272
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
L+ FIGG + + + LMK+P K+ +EID V G R +D+ KMPY EA
Sbjct: 273 TLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R ++P +DT + + KGT V + ++ P F
Sbjct: 333 VIHEIQRF--GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFN 390
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
P+ F+++ G K F+PF GKR C G+ L F+ T+++ ++
Sbjct: 391 PQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 45/435 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCD-----WSSL--QEKRRRIARKY-- 49
+G+ P +V+ + I+E L+ Q F G +A+ D + + +R R R++
Sbjct: 51 LGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSL 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
+ R + + + E L++ + K S + L S SN+ +
Sbjct: 111 ATMRDFGMGKRSVEERIQEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGK 167
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLE- 168
RFDY+D +R D + + F + FS + G +I + E
Sbjct: 168 RFDYKDP---VFLRLLD--LFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 169 -----RIIKQHLDTVDYDDHPRDFTDALLQYFREDEE---LSWDH---IMFDLEDFIGGH 217
+ +++H T+D +PRDF D L +D+ + H I+ L F G
Sbjct: 223 NTFIGQSVEKHRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGT 281
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRIC 277
+ + ++K PH +++++EI+ V G R +DD+ KMPYT+A++ E R+
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341
Query: 278 -ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL----YWDEPTKFKPERFISQ 331
P VPH T+DT GY + K T V F + +S L Y++ P F P F+
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEV----FPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP-NMDELKLVP--AC 388
+G + + F+PF GKR C+G+ + F+ T+IL ++ ++ P +++ L P +
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG 457
Query: 389 VALPAETYELEFTLR 403
V +Y++ F R
Sbjct: 458 VGNVPPSYQIRFLAR 472
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 45/435 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCD-----WSSL--QEKRRRIARKY-- 49
+G+ P +V+ + I+E L+ Q F G +A+ D + + +R R R++
Sbjct: 51 LGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSL 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
+ R + + + E L++ + K S + L S SN+ +
Sbjct: 111 ATMRDFGMGKRSVEERIQEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGK 167
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLE- 168
RFDY+D +R D + + F + FS + G +I + E
Sbjct: 168 RFDYKDP---VFLRLLD--LFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 169 -----RIIKQHLDTVDYDDHPRDFTDALLQYFREDEE---LSWDH---IMFDLEDFIGGH 217
+ +++H T+D +PRDF D L +D+ + H I+ L F G
Sbjct: 223 NTFIGQSVEKHRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGT 281
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRIC 277
+ + ++K PH +++++EI+ V G R +DD+ KMPYT+A++ E R+
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341
Query: 278 -ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL----YWDEPTKFKPERFISQ 331
P VPH T+DT GY + K T V F + +S L Y++ P F P F+
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEV----FPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP-NMDELKLVP--AC 388
+G + + F+PF GKR C+G+ + F+ T+IL ++ ++ P +++ L P +
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG 457
Query: 389 VALPAETYELEFTLR 403
V +Y++ F R
Sbjct: 458 VGNVPPSYQIRFLAR 472
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 176/408 (43%), Gaps = 56/408 (13%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G +V+ + ++E L+ Q F G A DW + + Y ++ SN
Sbjct: 51 LGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW---------VFKGYG---VVFSN 98
Query: 59 YQLMSKI------SLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSN 100
+ ++ +L + + + I +RI L G I P L SN
Sbjct: 99 GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN 158
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWAN 160
+ + + RFDY+DK+ +++R IF + L FS M + G
Sbjct: 159 VISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTS-----TGQLYEMFSSVMKHLPGPQQ 213
Query: 161 EIREIM--LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWDHIMF 208
+ +++ LE I + ++ T+D + PRDF D+ L +E+E+ + +M
Sbjct: 214 QAFQLLQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMT 272
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
L+ F+GG + + + LMK+P K+ +EID V G R +D+ KMPY EA
Sbjct: 273 TLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R ++P +DT + + KGT V + ++ P F
Sbjct: 333 VIHEIQRF--GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFN 390
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
P+ F+++ G K F+PF GKR C G+ L F+ T+++ ++
Sbjct: 391 PQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 45/435 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCD-----WSSL--QEKRRRIARKY-- 49
+G+ P +V+ + I+E L+ Q F G +A+ D + + +R R R++
Sbjct: 51 LGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSL 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
+ R + + + E L++ + K S + L S SN+ +
Sbjct: 111 ATMRDFGMGKRSVEERIQEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGK 167
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLE- 168
RFDY+D +R D + + F + FS + G +I + E
Sbjct: 168 RFDYKDP---VFLRLLD--LFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 169 -----RIIKQHLDTVDYDDHPRDFTDALLQYFREDEE---LSWDH---IMFDLEDFIGGH 217
+ +++H T+D +PRDF D L +D+ + H I+ L F G
Sbjct: 223 NTFIGQSVEKHRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGT 281
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRIC 277
+ + ++K PH +++++EI+ V G R +DD+ KMPYT+A++ E R+
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341
Query: 278 -ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL----YWDEPTKFKPERFISQ 331
P VPH T+DT GY + K T V F + +S L Y++ P F P F+
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEV----FPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP-NMDELKLVP--AC 388
+G + + F+PF GKR C+G+ + F+ T+IL ++ ++ P +++ L P +
Sbjct: 398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG 457
Query: 389 VALPAETYELEFTLR 403
V +Y++ F R
Sbjct: 458 VGNVPPSYQIRFLAR 472
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 174/409 (42%), Gaps = 46/409 (11%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDW--------SSLQEKRRRIAR-KY 49
+G +V+ + +KE L+ Q F G A DW S E+ +++ R
Sbjct: 51 LGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSI 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKP--LLQSAFSNMFTQYLC 107
+ R + + + E L+ A L G I P L SN+ + +
Sbjct: 111 ATLRGFGVGKRGIEERIQEEAGFLIDA-----LRGTHGANIDPTFFLSRTVSNVISSIVF 165
Query: 108 STRFDYEDKQ----LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANE-I 162
RFDYEDK+ L+ M+ +F F + G L FS M + G +
Sbjct: 166 GDRFDYEDKEFLSLLRMMLGSFQ--FTATSTGQ-------LYEMFSSVMKHLPGPQQQAF 216
Query: 163 REIM-LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWDHIMFDLE 211
+E+ LE I + ++ T+D + PRDF D+ L +E+E+ + +M L
Sbjct: 217 KELQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLN 275
Query: 212 DFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVF 271
F G + + + LMK+P K+ +EID V G R +D+ KMPYTEA++
Sbjct: 276 LFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIH 335
Query: 272 ETLRICAS-PI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
E R P+ + H +DT + + KGT V + ++ P F P+ F+
Sbjct: 336 EIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL 395
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN 378
+ G K F+PF GKR C G+ L F+ T+I+ ++ P
Sbjct: 396 DKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQ 444
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 175/408 (42%), Gaps = 56/408 (13%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G +V+ + ++E L+ Q F G A DW + + Y ++ SN
Sbjct: 51 LGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW---------VFKGYG---VVFSN 98
Query: 59 YQLMSKI------SLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSN 100
+ ++ +L + + + I +RI L G I P L SN
Sbjct: 99 GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN 158
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWAN 160
+ + + RFDY+DK+ +++R IF + L FS M + G
Sbjct: 159 VISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTS-----TGQLYEMFSSVMKHLPGPQQ 213
Query: 161 EIREIM--LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWDHIMF 208
+ +++ LE I + ++ T+D + PRDF D+ L +E+E+ + +M
Sbjct: 214 QAFQLLQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMT 272
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
L FIGG + + + LMK+P K+ +EID V G R +D+ KMPY EA
Sbjct: 273 TLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R ++P +DT + + KGT V + ++ P F
Sbjct: 333 VIHEIQRF--GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFN 390
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
P+ F+++ G K F+PF GKR C G+ L F+ T+++ ++
Sbjct: 391 PQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 193/435 (44%), Gaps = 45/435 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCD-----WSSL--QEKRRRIARKY-- 49
+G+ P +V+ + I+E L+ Q F G +A+ D + + +R R R++
Sbjct: 51 LGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSL 110
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
+ R + + + E L++ + K S + L S SN+ +
Sbjct: 111 ATMRDFGMGKRSVEERIQEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGK 167
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLE- 168
RFDY+D +R D + + F + FS + G +I + E
Sbjct: 168 RFDYKDP---VFLRLLD--LFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 169 -----RIIKQHLDTVDYDDHPRDFTDALLQYFREDEE---LSWDH---IMFDLEDFIGGH 217
+ +++H T+D +PRDF D L +D+ + H I+ L F G
Sbjct: 223 NTFIGQSVEKHRATLD-PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGT 281
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRIC 277
+ + ++K PH +++++EI+ V G R +DD+ KMPYT+A++ E R+
Sbjct: 282 ETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341
Query: 278 -ASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDL----YWDEPTKFKPERFISQ 331
P VPH T+DT GY + K T V F + +S L Y++ P F P F+
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEV----FPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP-NMDELKLVP--AC 388
+G + + F+PF GKR C G+ + F+ T+IL ++ ++ P +++ L P +
Sbjct: 398 NGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG 457
Query: 389 VALPAETYELEFTLR 403
V +Y++ F R
Sbjct: 458 VGNVPPSYQIRFLAR 472
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 175/408 (42%), Gaps = 56/408 (13%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G +V+ + ++E L+ Q F G A DW + + Y ++ SN
Sbjct: 51 LGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW---------VFKGYG---VVFSN 98
Query: 59 YQLMSKI------SLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSN 100
+ ++ +L + + + I +RI L G I P L SN
Sbjct: 99 GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN 158
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWAN 160
+ + + RFDY+DK+ +++R IF + L FS M + G
Sbjct: 159 VISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTS-----TGQLYEMFSSVMKHLPGPQQ 213
Query: 161 EIREIM--LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWDHIMF 208
+ + + LE I + ++ T+D + PRDF D+ L +E+E+ + +M
Sbjct: 214 QAFQCLQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMT 272
Query: 209 DLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEA 268
L+ FIGG + + + LMK+P K+ +EID V G R +D+ KMPY EA
Sbjct: 273 TLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 269 LVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
++ E R ++P +DT + + KGT V + ++ P F
Sbjct: 333 VIHEIQRF--GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFN 390
Query: 325 PERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
P+ F+++ G K F+PF GKR C G+ L F+ T+++ ++
Sbjct: 391 PQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 175/412 (42%), Gaps = 64/412 (15%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG--PLALCDWSSLQEKRRRIARKYCSPRIISSN 58
+G +V+ + ++E L+ Q F G A DW + + Y ++ SN
Sbjct: 51 LGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW---------VFKGYG---VVFSN 98
Query: 59 YQLMSKI------SLIETPILLKAIHKRI----------LSGNKSVKIKP--LLQSAFSN 100
+ ++ +L + + + I +RI L G I P L SN
Sbjct: 99 GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN 158
Query: 101 MFTQYLCSTRFDYEDKQ----LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIA 156
+ + + RFDY+DK+ L+ M+ +F F + G L FS M +
Sbjct: 159 VISSIVFGDRFDYKDKEFLSLLRMMLGSFQ--FTSTSTGQ-------LYEMFSSVMKHLP 209
Query: 157 GWANEIREIM--LERIIKQHLD----TVDYDDHPRDFTDALLQYFREDEE------LSWD 204
G + +++ LE I + ++ T+D + PRDF D+ L +E+E+ +
Sbjct: 210 GPQQQAFQLLQGLEDFIAKKVEHNQRTLD-PNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 205 HIMFDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMP 264
+M L F G + + + LMK+P K+ +EID V G R +D+ KMP
Sbjct: 269 LVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMP 328
Query: 265 YTEALVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEP 320
Y EA++ E R ++P +DT + + KGT V + ++ P
Sbjct: 329 YMEAVIHEIQRF--GDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 321 TKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
F P+ F+++ G K F+PF GKR C G+ L F+ T+++ ++
Sbjct: 387 QDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 148/311 (47%), Gaps = 35/311 (11%)
Query: 94 LQSAFSNMFTQYLCSTRFDYEDKQL--------QTMVRNFDEIFYEINQGHPVDFLPWLN 145
+Q FS + +C F ++ L Q +++ +D +I +D +P+L
Sbjct: 161 IQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQI-----LDMVPFLR 215
Query: 146 PFFSKHMNKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYF---REDE--- 199
F + + ++ A E R+ M+E+ +++H +++ RD TD +LQ R +E
Sbjct: 216 FFPNPGLWRLKQ-AIENRDHMVEKQLRRHKESMVAGQW-RDMTDYMLQGVGRQRVEEGPG 273
Query: 200 ELSWDHIMFDLED-FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTG---GLRDV 255
+L H+ + D FIGG + + + +L+ +P ++++E+D G V
Sbjct: 274 QLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRV 333
Query: 256 CMDDKYKMPYTEALVFETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLN 311
D+ ++P A + E LR+ P+VP H T +++ GY + +G VVI N +
Sbjct: 334 TYKDRARLPLLNATIAEVLRL--RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH 391
Query: 312 TSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNH 371
+ W++P +F+P+RF+ PS + FG G R C+G+ L F+V+ +L
Sbjct: 392 LDETVWEQPHEFRPDRFLEPGA---NPSA-LAFGCGARVCLGESLARLELFVVLARLLQA 447
Query: 372 YDVSYPNMDEL 382
+ + P + L
Sbjct: 448 FTLLPPPVGAL 458
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Query: 221 GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICAS- 279
N +M IL L +NP ++ QE+ +V + +D MPY +A + E++R+ S
Sbjct: 300 ANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSV 359
Query: 280 PIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPS 339
P + T + Y++ KGTV+ LN L +S+ +++ KF+PER++ ++ + P
Sbjct: 360 PFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK-KINPF 418
Query: 340 HFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVPACVALPAETYELE 399
+PFG GKR CIG++L + + I+ YD+ + + ++++ + +P+ +
Sbjct: 419 AHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIA 478
Query: 400 FTLR 403
F R
Sbjct: 479 FRPR 482
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 160/398 (40%), Gaps = 38/398 (9%)
Query: 2 GTTPCIVVNSFELIKEILIVQG-SLFG-----GPLALCDW--SSLQEKRRRIARKYCSPR 53
G P + + ++IK +L+ + S+F GP+ S +++ + R SP
Sbjct: 55 GQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPT 114
Query: 54 IISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCSTRFDY 113
S + M I +L++ + + +G K V +K + + ++ T D
Sbjct: 115 FTSGKLKEMVPIIAQYGDVLVRNLRREAETG-KPVTLKDVFGAYSMDVITSTSFGVNIDS 173
Query: 114 EDKQLQTMVRN---------FDEIFYEINQGHPVDFLPWLNP---------FFSKHMNKI 155
+ V N D F I P+L P F + N +
Sbjct: 174 LNNPQDPFVENTKKLLRFDFLDPFFLSIT------VFPFLIPILEVLNICVFPREVTNFL 227
Query: 156 AGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFIG 215
++E LE K +D + ++ + D EL I+F
Sbjct: 228 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF----IFA 283
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR 275
G+ +++ I+ L +P K+++EIDAV D +M Y + +V ETLR
Sbjct: 284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 343
Query: 276 ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI 334
+ + + V +D + G + KG VV++ ++ L+ YW EP KF PERF ++
Sbjct: 344 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 403
Query: 335 VVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+ P + PFG+G R CIG + + + +L ++
Sbjct: 404 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 441
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 160/398 (40%), Gaps = 38/398 (9%)
Query: 2 GTTPCIVVNSFELIKEILIVQG-SLFG-----GPLALCDW--SSLQEKRRRIARKYCSPR 53
G P + + ++IK +L+ + S+F GP+ S +++ + R SP
Sbjct: 57 GQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPT 116
Query: 54 IISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCSTRFDY 113
S + M I +L++ + + +G K V +K + + ++ T D
Sbjct: 117 FTSGKLKEMVPIIAQYGDVLVRNLRREAETG-KPVTLKDVFGAYSMDVITSTSFGVNIDS 175
Query: 114 EDKQLQTMVRN---------FDEIFYEINQGHPVDFLPWLNP---------FFSKHMNKI 155
+ V N D F I P+L P F + N +
Sbjct: 176 LNNPQDPFVENTKKLLRFDFLDPFFLSIT------VFPFLIPILEVLNICVFPREVTNFL 229
Query: 156 AGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFIG 215
++E LE K +D + ++ + D EL I+F
Sbjct: 230 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF----IFA 285
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR 275
G+ +++ I+ L +P K+++EIDAV D +M Y + +V ETLR
Sbjct: 286 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 345
Query: 276 ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI 334
+ + + V +D + G + KG VV++ ++ L+ YW EP KF PERF ++
Sbjct: 346 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 405
Query: 335 VVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+ P + PFG+G R CIG + + + +L ++
Sbjct: 406 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 160/398 (40%), Gaps = 38/398 (9%)
Query: 2 GTTPCIVVNSFELIKEILIVQG-SLFG-----GPLALCDW--SSLQEKRRRIARKYCSPR 53
G P + + ++IK +L+ + S+F GP+ S +++ + R SP
Sbjct: 56 GQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPT 115
Query: 54 IISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCSTRFDY 113
S + M I +L++ + + +G K V +K + + ++ T D
Sbjct: 116 FTSGKLKEMVPIIAQYGDVLVRNLRREAETG-KPVTLKDVFGAYSMDVITSTSFGVNIDS 174
Query: 114 EDKQLQTMVRN---------FDEIFYEINQGHPVDFLPWLNP---------FFSKHMNKI 155
+ V N D F I P+L P F + N +
Sbjct: 175 LNNPQDPFVENTKKLLRFDFLDPFFLSIT------VFPFLIPILEVLNICVFPREVTNFL 228
Query: 156 AGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFIG 215
++E LE K +D + ++ + D EL I+F
Sbjct: 229 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF----IFA 284
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR 275
G+ +++ I+ L +P K+++EIDAV D +M Y + +V ETLR
Sbjct: 285 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 344
Query: 276 ICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI 334
+ + + V +D + G + KG VV++ ++ L+ YW EP KF PERF ++
Sbjct: 345 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 404
Query: 335 VVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+ P + PFG+G R CIG + + + +L ++
Sbjct: 405 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 442
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH A L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHEATSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERII--KQHL 175
+ +MVR DE+ ++ + +P D P + + I + + +I+ +R +Q
Sbjct: 175 ITSMVRALDEVMNKLQRANPDD--PAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD 232
Query: 176 DTVDYDDHPRD-FTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
D + + H +D T L +DE + + I F I GH L+ L +L+KN
Sbjct: 233 DLLTHMLHGKDPETGEPL----DDENIRYQIITF----LIAGHETTSGLLTFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LRI +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTM 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH A L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHEATSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH A L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHEATSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 177 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 230
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 286
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ SP A EDT
Sbjct: 287 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTV 343
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 344 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 400
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFD 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 197 EDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVC 256
+D +S+ I F I GH L+ L +L+KNPH + K+ +E V L D
Sbjct: 250 DDGNISYQIITF----LIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRV---LVDPV 302
Query: 257 MDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTTVAG-YSVCKGTVVILNNFDLNT 312
K ++ Y ++ E LR+ +P A EDT + G Y + KG V++ L+
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHR 362
Query: 313 SDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
W D+ +F+PERF + I P H F PFG G+R CIGQ+ +V+ +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLK 419
Query: 371 HYD 373
H+D
Sbjct: 420 HFD 422
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH + L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHESTSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH + L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHESTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH + L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHESTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 177 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 230
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 286
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 287 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 343
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 344 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 400
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFD 425
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 29/267 (10%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 177 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 230
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 286
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRICASPIVPHV---ATED 289
PH + K +E V L D K ++ Y ++ E LR+ P VP A ED
Sbjct: 287 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLW--PTVPAFSLYAKED 341
Query: 290 TTVAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGT 346
T + G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG
Sbjct: 342 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGN 398
Query: 347 GKRTCIGQKLVTDFTFIVITSILNHYD 373
G+R CIGQ+ +V+ +L H+D
Sbjct: 399 GQRACIGQQFALHEATLVLGMMLKHFD 425
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLRRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F GH A L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LAAGHEATSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHELQKAAEEAARV---LVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F GH A L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LAAGHEATSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRICAS-PIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ + P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F GH A L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LAAGHEATSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRICAS-PIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ + P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHENTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIKGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFD 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIQGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 197 EDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVC 256
+DE + + + F I GH L+ L +L+KNPH + K +E V L D
Sbjct: 256 DDENIRYQIVTF----LIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARV---LVDPV 308
Query: 257 MDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTTVAG-YSVCKGTVVILNNFDLNT 312
K ++ Y ++ E LR+ +P A EDT + G Y + KG +++ L+
Sbjct: 309 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHR 368
Query: 313 SDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
W D+ +F+PERF + I P H F PFG G+R CIGQ+ +V+ +L
Sbjct: 369 DKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLK 425
Query: 371 HYD 373
H+D
Sbjct: 426 HFD 428
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIEGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIHGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLRRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F GH A L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LAAGHEATSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHELQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LICGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIMGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F P+G G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPYGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIG++ +V+ +L H+D
Sbjct: 398 RACIGKQFALHEATLVLGMMLKHFD 422
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I + I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIIT----ELIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F P+G G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPWGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 175 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 228
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 284
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 285 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 398
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R C GQ+ +V+ +L H+D
Sbjct: 399 RACPGQQFALHEATLVLGMMLKHFD 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F PFG G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPFGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R C GQ+ +V+ +L H+D
Sbjct: 398 RACEGQQFALHEATLVLGMMLKHFD 422
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F P G G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPHGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 118 LQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDT 177
+ +MVR DE ++ + +P D P + ++ + + +++ + I +
Sbjct: 174 ITSMVRALDEAMNKLQRANPDD------PAYDENKRQFQEDIKVMNDLVDKIIADRKASG 227
Query: 178 VDYDD---HPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKN 234
DD H + D +DE + + I F I GH L+ L +L+KN
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF----LIAGHETTSGLLSFALYFLVKN 283
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKY--KMPYTEALVFETLRIC-ASPIVPHVATEDTT 291
PH + K +E V L D K ++ Y ++ E LR+ +P A EDT
Sbjct: 284 PHVLQKAAEEAARV---LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 292 VAG-YSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQDGIVVKPSH-FIPFGTGK 348
+ G Y + KG +++ L+ W D+ +F+PERF + I P H F P G G+
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQHAFKPAGNGQ 397
Query: 349 RTCIGQKLVTDFTFIVITSILNHYD 373
R CIGQ+ +V+ +L H+D
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 188 TDALLQYFREDEELSWDHIMFD--LEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEI 245
D L Q + +E D + D + FI GH N + ++ L + P + +++ E+
Sbjct: 225 ADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEV 284
Query: 246 DAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVP-HVATEDTTVAGYSVCKGTVVI 304
D V G R + +D ++ Y ++ E+LR+ + E+T + G V T ++
Sbjct: 285 DEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLL 344
Query: 305 LNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIV 364
+ + + D Y+++P F P+RF G + PF G R+CIGQ+ +V
Sbjct: 345 FSTYVMGRMDTYFEDPLTFNPDRF--GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVV 402
Query: 365 ITSILNHYDVSYPNMDELKLVPA 387
+ +L E +LVP
Sbjct: 403 MAKLLQRL--------EFRLVPG 417
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLR 275
G + + +M +L L +P D+IR E++AVTGG R V +D K+ +T ++ E +R
Sbjct: 275 GSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVEAMR 333
Query: 276 I-CASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI 334
+ A ++ A ++ + GY + G +I + + + +D+ +F P+R++ +
Sbjct: 334 LRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA 393
Query: 335 VVKPSHFIPFGTGKRTC 351
V PF GKR C
Sbjct: 394 NVPKYAMKPFSAGKRKC 410
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 210 LEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEAL 269
LE I + + +L + K+P+ + I +EI V G RD+ +DD K+ E
Sbjct: 301 LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE-RDIKIDDIQKLKVMENF 359
Query: 270 VFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPE 326
++E++R P+V V A ED + GY V KGT +ILN ++ + ++ +P +F E
Sbjct: 360 IYESMRY--QPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRLE-FFPKPNEFTLE 416
Query: 327 RFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV 374
F V +F PFG G R C G+ + ++ ++L + V
Sbjct: 417 NFAKN----VPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAGW 158
M C F ED + + R+F ++ ++ F+PWL +
Sbjct: 151 MIINTACQCLFG-EDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREA 209
Query: 159 ANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIG 215
E+++I+ E I+ + + D++ D LL+ +R+ +S + M F G
Sbjct: 210 RAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAG 269
Query: 216 GHAAL--GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFE 272
H + + ML L++ KN +DK+ +EID L D MD+ MP+ E V E
Sbjct: 270 QHTSTITTSWSMLHLMH-PKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCVRE 325
Query: 273 TLRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
++R P +V + + V Y V KG ++ + + + + P + PER
Sbjct: 326 SIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDE 383
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
DG FI FG G CIGQK ++ + YD
Sbjct: 384 KVDGA------FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 421
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAGW 158
M C F ED + + R+F ++ ++ F+PWL +
Sbjct: 145 MIINTACQCLFG-EDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREA 203
Query: 159 ANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIG 215
E+++I+ E I+ + + D++ D LL+ +R+ +S + M F G
Sbjct: 204 RAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAG 263
Query: 216 GHAAL--GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFE 272
H + + ML L++ KN +DK+ +EID L D MD+ MP+ E V E
Sbjct: 264 QHTSTITTSWSMLHLMH-PKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCVRE 319
Query: 273 TLRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
++R P +V + + V Y V KG ++ + + + + P + PER
Sbjct: 320 SIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDE 377
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
DG FI FG G CIGQK ++ + YD
Sbjct: 378 KVDGA------FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 415
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 24/284 (8%)
Query: 101 MFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIAGW 158
M C F ED + + R+F ++ ++ F+PWL +
Sbjct: 160 MIINTACQCLFG-EDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREA 218
Query: 159 ANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIG 215
E+++I+ E I+ + + D++ D LL+ +R+ +S + M F G
Sbjct: 219 RAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAG 278
Query: 216 GHAAL--GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFE 272
H + + ML L++ KN +DK+ +EID L D MD+ MP+ E V E
Sbjct: 279 QHTSTITTSWSMLHLMH-PKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCVRE 334
Query: 273 TLRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI 329
++R P +V + + V Y V KG ++ + + + + P + PER
Sbjct: 335 SIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDE 392
Query: 330 SQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
DG FI FG G CIGQK ++ + YD
Sbjct: 393 KVDGA------FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 430
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 34/290 (11%)
Query: 124 NFDEIFYEINQGHPVDFLPWLNPF-----FSKHMNKIAGWANEIREIMLERIIKQHLDTV 178
F ++++E+ +G D L +++P+ F + G + +IM RI D
Sbjct: 164 RFAKLYHELERG--TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 179 DYDDHPRDFTDALLQYFRED--EELSWDHI--MFDLEDFIGGHAALGNLVMLILIYLMKN 234
D RD D L+ E S D I MF F G H + G LI LM++
Sbjct: 222 D-----RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGT-ASWTLIELMRH 275
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIV-PHVATEDTTVA 293
+ E+D + G R V ++P E ++ ETLR+ I+ VA + V
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 294 GYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS--QDGIVVKPSHFIPFGTGKRTC 351
G+ + +G +V + N + +P F P R+ Q+ ++ + + +IPFG G+ C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT-WIPFGAGRHRC 394
Query: 352 IGQKLVTDFTFIVITSILNHYDV-------SYPNMDELKLV-----PACV 389
+G + + +L Y+ SY N D K+V PACV
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN-DHSKMVVQLAQPACV 443
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 182 DHPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIY-LMKNPHCIDK 240
+ P+ +T + + + ELS + I + + G +L+ ++ L +NP
Sbjct: 255 NRPQHYTGIVAELLLK-AELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQI 313
Query: 241 IRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPI-VPHVATEDTTVAGYSVCK 299
+RQE A + + ++P A + ETLR+ + + V + D + Y +
Sbjct: 314 LRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPA 373
Query: 300 GTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTD 359
GT+V + + L + + P ++ P+R++ G + H +PFG G R C+G++L
Sbjct: 374 GTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRG-SGRNFHHVPFGFGMRQCLGRRLAEA 432
Query: 360 FTFIVITSILNHYDVSYPNMDELKLVPACVALPAETYELEF 400
+++ +L H+ V +++K+V + + P + L F
Sbjct: 433 EMLLLLHHVLKHFLVETLTQEDIKMVYSFILRPGTSPLLTF 473
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 34/290 (11%)
Query: 124 NFDEIFYEINQGHPVDFLPWLNPF-----FSKHMNKIAGWANEIREIMLERIIKQHLDTV 178
F ++++E+ +G D L +++P+ F + G + +IM RI D
Sbjct: 164 RFAKLYHELERG--TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 179 DYDDHPRDFTDALLQYFRED--EELSWDHI--MFDLEDFIGGHAALGNLVMLILIYLMKN 234
D RD D L+ E S D I MF F G H + G LI LM++
Sbjct: 222 D-----RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGT-ASWTLIELMRH 275
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIV-PHVATEDTTVA 293
+ E+D + G R V ++P E ++ ETLR+ I+ VA + V
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 294 GYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS--QDGIVVKPSHFIPFGTGKRTC 351
G+ + +G +V + N + +P F P R+ Q+ ++ + + +IPFG G+ C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT-WIPFGAGRHRC 394
Query: 352 IGQKLVTDFTFIVITSILNHYDV-------SYPNMDELKLV-----PACV 389
+G + + +L Y+ SY N D K+V PA V
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN-DHSKMVVQLAQPAAV 443
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 34/290 (11%)
Query: 124 NFDEIFYEINQGHPVDFLPWLNPF-----FSKHMNKIAGWANEIREIMLERIIKQHLDTV 178
F ++++E+ +G D L +++P+ F + G + +IM RI D
Sbjct: 164 RFAKLYHELERG--TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 179 DYDDHPRDFTDALLQYFRED--EELSWDHI--MFDLEDFIGGHAALGNLVMLILIYLMKN 234
D RD D L+ E S D I MF F G H + G LI LM++
Sbjct: 222 D-----RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGT-ASWTLIELMRH 275
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIV-PHVATEDTTVA 293
+ E+D + G R V ++P E ++ ETLR+ I+ VA + V
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 294 GYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS--QDGIVVKPSHFIPFGTGKRTC 351
G+ + +G +V + N + +P F P R+ Q+ ++ + + +IPFG G+ C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT-WIPFGAGRHRC 394
Query: 352 IGQKLVTDFTFIVITSILNHYDV-------SYPNMDELKLV-----PACV 389
+G + + +L Y+ SY N D K+V PA V
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN-DHSKMVVQLAQPAAV 443
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 34/290 (11%)
Query: 124 NFDEIFYEINQGHPVDFLPWLNPF-----FSKHMNKIAGWANEIREIMLERIIKQHLDTV 178
F ++++E+ +G D L +++P+ F + G + +IM RI D
Sbjct: 164 RFAKLYHELERG--TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 179 DYDDHPRDFTDALLQYFRED--EELSWDHI--MFDLEDFIGGHAALGNLVMLILIYLMKN 234
D RD D L+ E S D I MF F G H + G LI LM++
Sbjct: 222 D-----RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGT-ASWTLIELMRH 275
Query: 235 PHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIV-PHVATEDTTVA 293
+ E+D + G R V ++P E ++ ETLR+ I+ VA + V
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 294 GYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS--QDGIVVKPSHFIPFGTGKRTC 351
G+ + +G +V + N + +P F P R+ Q+ ++ + + +IPFG G+ C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT-WIPFGAGRHRC 394
Query: 352 IGQKLVTDFTFIVITSILNHYDV-------SYPNMDELKLV-----PACV 389
+G + + +L Y+ SY N D K+V PA V
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN-DHSKMVVQLAQPAAV 443
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 40/278 (14%)
Query: 135 GHPVDFLPWLNPFFSKHM-----------NKIAGWANEIREIML---ERIIKQHLDTVDY 180
G V P L P+F ++ N + G + R ++L E+IIK
Sbjct: 161 GEKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKAR------ 214
Query: 181 DDHPRDFTDALLQYFREDEELSWDHIMFDLEDFI-----GGHAALGNLVMLILIYLMKNP 235
P DAL ++ + + +L+D I GH L + + + L ++
Sbjct: 215 QQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHS 274
Query: 236 HCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVAT------ED 289
+++RQE + + +++ + KMPY + ++ E LR+ +P V +D
Sbjct: 275 DIRERVRQEQNKLQLS-QELTAETLKKMPYLDQVLQEVLRL-----IPPVGGGFRELIQD 328
Query: 290 TTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVV--KPSHFIPFGTG 347
G+ KG +V + + +P KF PERF + DG P +PFG G
Sbjct: 329 CQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF-TPDGSATHNPPFAHVPFGGG 387
Query: 348 KRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLV 385
R C+G++ + T ++ +D + L+LV
Sbjct: 388 LRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELV 425
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + + V+ D D LL +R+ +S + M F G
Sbjct: 207 TELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 266
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 267 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 322
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 323 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 380
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 381 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 417
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + + V+ D D LL +R+ +S + M F G
Sbjct: 207 TELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 266
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 267 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 322
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 323 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 380
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 381 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 417
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + + V+ D D LL +R+ +S + M F G
Sbjct: 208 TELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 267
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 268 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 323
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 324 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 381
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 382 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 418
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + V+ D D LL +R+ +S + M F G
Sbjct: 220 TELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 279
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 280 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 335
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 336 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 393
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 394 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 430
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + + V+ D D LL +R+ +S + M F G
Sbjct: 206 TELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 265
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 266 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 321
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 322 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 379
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 380 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 416
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 160 NEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ-YFREDEELSWDHI--MFDLEDFIGG 216
E+++I+ E II + + V+ D D LL +R+ +S + M F G
Sbjct: 220 TELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQ 279
Query: 217 HAA--LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALVFET 273
H + ML L++ H ++ +R+EI+ L + MD+ MP+ E E+
Sbjct: 280 HTSSITTTWSMLHLMHPANVKH-LEALRKEIEEFPAQLNYNNVMDE---MPFAERCARES 335
Query: 274 LRICASP---IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
+R P ++ D V Y V KG ++ + + + + EP ++ PER
Sbjct: 336 IR--RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK 393
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+G FI FG G CIGQK ++ + YD
Sbjct: 394 VEGA------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 430
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 23/286 (8%)
Query: 99 SNMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQG--HPVDFLPWLNPFFSKHMNKIA 156
S M C F ED + + R F ++ ++ FLPW+ +
Sbjct: 144 SAMIINTACQCLFG-EDLRKRLDARQFAQLLAKMESCLIPAAVFLPWILKLPLPQSYRCR 202
Query: 157 GWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALL-QYFREDEELSWDHI--MFDLEDF 213
E+++I+ E II + + D + D LL +R+ +S + M F
Sbjct: 203 DARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMF 262
Query: 214 IGGHAALGNLVMLILIYLM--KNPHCIDKIRQEIDAVTGGLR-DVCMDDKYKMPYTEALV 270
G H + L++LM +N + K+ QEID L D M++ MP+ E
Sbjct: 263 AGQHTSTIT-TTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYDNVMEE---MPFAEQCA 318
Query: 271 FETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERF 328
E++R P+V + V Y V +G ++ + + + + P ++ PER
Sbjct: 319 RESIRR-DPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERN 377
Query: 329 IS-QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
+ DG F FG G CIG+K V+ ++L YD
Sbjct: 378 MKLVDGA------FCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYD 417
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 198 DEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLM-KNPHCIDKIRQEIDAVTGGLRDVC 256
D ++S++ I ++ + + G ++ + +Y M +N D +R E+ A R
Sbjct: 268 DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAA----RHQA 323
Query: 257 MDDKYKM----PYTEALVFETLRICA-SPIVPHVATEDTTVAGYSVCKGTVVILNNFDLN 311
D M P +A + ETLR+ S + D + Y + T+V + + L
Sbjct: 324 QGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALG 383
Query: 312 TSDLYWDEPTKFKPERFISQDGIVVKPSHF--IPFGTGKRTCIGQKLVTDFTFIVITSIL 369
++ +P F P R++S+D + ++F + FG G R C+G+++ I + ++L
Sbjct: 384 REPTFFFDPENFDPTRWLSKDKNI---TYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 440
Query: 370 NHYDVSYPNMDELKLVPACVALPAETYELEF 400
++ V ++ ++ + +P + F
Sbjct: 441 ENFRVEIQHLSDVGTTFNLILMPEKPISFTF 471
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 198 DEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLM-KNPHCIDKIRQEIDAVTGGLRDVC 256
D ++S++ I ++ + + G ++ + +Y M +N D +R E+ A R
Sbjct: 265 DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAA----RHQA 320
Query: 257 MDDKYKM----PYTEALVFETLRICA-SPIVPHVATEDTTVAGYSVCKGTVVILNNFDLN 311
D M P +A + ETLR+ S + D + Y + T+V + + L
Sbjct: 321 QGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALG 380
Query: 312 TSDLYWDEPTKFKPERFISQDGIVVKPSHF--IPFGTGKRTCIGQKLVTDFTFIVITSIL 369
++ +P F P R++S+D + ++F + FG G R C+G+++ I + ++L
Sbjct: 381 REPTFFFDPENFDPTRWLSKDKNI---TYFRNLGFGWGVRQCLGRRIAELEMTIFLINML 437
Query: 370 NHYDVSYPNMDELKLVPACVALPAETYELEF 400
++ V ++ ++ + +P + F
Sbjct: 438 ENFRVEIQHLSDVGTTFNLILMPEKPISFTF 468
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 214 IGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFET 273
IGG+ NL+ ++ + +NP ID DA+ V ET
Sbjct: 187 IGGNETTTNLIGNMIRVIDENPDIID------DALKN---------------RSGFVEET 225
Query: 274 LRICASPI--VPH-VATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR SPI +PH A ED+ + + KG VI+ N + ++DEP FK R
Sbjct: 226 LRYY-SPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR--- 281
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+ H + FG G C+G L I + ILNH+
Sbjct: 282 ------REMH-LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 33/175 (18%)
Query: 189 DALLQYF--REDEELSWDH---IMFDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQ 243
D LL R+ EE DH +M L + GH N + L + L+++P ID + +
Sbjct: 212 DGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLR 271
Query: 244 EIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICA-SPIVPHVATEDTTVAGYSVCKGTV 302
+ AV+G +V E LR + S + +A ED V G ++ G
Sbjct: 272 DPGAVSG------------------VVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDA 313
Query: 303 VILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLV 357
V+++ +N ++ P F R H + FG G C+GQ L
Sbjct: 314 VLVSITLMNRDAKAYENPDIFDARR---------NARHHVGFGHGIHQCLGQNLA 359
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 297 VCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPS-HFIPFGTGKRTCIGQK 355
+ +GT ++L+ + T LY+ E F+PERF+++ G PS + PFG G+R C+G+
Sbjct: 286 LPQGTTLVLSPY--VTQRLYFPEGEAFQPERFLAERGT---PSGRYFPFGLGQRLCLGRD 340
Query: 356 LVTDFTFIVITSILNHY---DVSYPN-MDELKLVPACVALPAETYE 397
IV+ + + + +P + ++ L P LPA E
Sbjct: 341 FALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEG-GLPARPRE 385
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 161 EIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFI-GGHAA 219
EI++I + I K+ DD + DA +++ L+ D + L + G
Sbjct: 211 EIKDIFYKAIQKRRQSQEKIDDILQTLLDAT---YKDGRPLTDDEVAGMLIGLLLAGQHT 267
Query: 220 LGNLVMLILIYLMKNPHCIDKIRQEIDAVTG-GLRDVCMDDKYKMPYTEALVFETLRICA 278
+ +L ++ K E V G L + D + + + ETLR+
Sbjct: 268 SSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRP 327
Query: 279 S-PIVPHVATEDTTVAGYSVCKGTVVILN---NFDLNTSDLYWDEPTKFKPERFISQDGI 334
I+ +A TVAGY++ G V ++ N L S W E F P+R++ +
Sbjct: 328 PIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDS---WVERLDFNPDRYLQDNPA 384
Query: 335 VVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSI 368
+ ++PFG G+ CIG+ +F ++ I +I
Sbjct: 385 SGEKFAYVPFGAGRHRCIGE----NFAYVQIKTI 414
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 28/168 (16%)
Query: 193 QYFREDEELSWDHIMFDLEDFI---GGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVT 249
Q R+ +E + DH F+ GH N++ L ++ L+ +P + ++
Sbjct: 220 QIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN----- 274
Query: 250 GGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVATEDTTVAGYSVCKGTVVILNNFD 309
+ M E L + T+ A + +ATED + G S+ G VI++
Sbjct: 275 --------PGRTPMAVEELLRYFTI---ADGVTSRLATEDVEIGGVSIKAGEGVIVSMLS 323
Query: 310 LNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLV 357
N + +P ER H + FG G C+GQ L
Sbjct: 324 ANWDPAVFKDPAVLDVER---------GARHHLAFGFGPHQCLGQNLA 362
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 221 GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASP 280
G ++ YL+ +P + +R+EI GG + + P +++++ETLR+ A+
Sbjct: 270 GPAAFWVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAAA 326
Query: 281 IVPHVATEDTTV-----AGYSVCKGTVVILNNFDLNTSD-LYWDEPTKFKPERFISQD-- 332
++ T+D + Y + +G + + F D +P F+ +RF++ D
Sbjct: 327 LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRT 386
Query: 333 --------GIVVK-PSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV 374
G VK PS +P+GT C G+ ++ +IL +DV
Sbjct: 387 EKKDFFKNGARVKYPS--VPWGTEDNLCPGRHFAVHAIKELVFTILTRFDV 435
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 265 YTEALVFETLRICA-SPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKF 323
Y E V E R P V A++D G + +G V+L+ + N W +P +F
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 324 KPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYPNM 379
+PERF + D +FIP G G C G+ +V + ++N P+
Sbjct: 333 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 389
Query: 380 D 380
D
Sbjct: 390 D 390
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 265 YTEALVFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
Y E V E R P P V A++D G + +G V+L+ + N W +P
Sbjct: 265 YAELFVQEVRRFY--PFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 322 KFKPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+F+PERF + D +FIP G G C G+ +V + ++N P
Sbjct: 323 EFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 378 NMD 380
+ D
Sbjct: 380 DQD 382
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 265 YTEALVFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
Y E V E R P P V A++D G + +G V+L+ + N W +P
Sbjct: 265 YAELFVQEVRRFY--PFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 322 KFKPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+F+PERF + D +FIP G G C G+ +V + ++N P
Sbjct: 323 EFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 378 NMD 380
+ D
Sbjct: 380 DQD 382
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 265 YTEALVFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
Y E V E R P P V A++D G + +G V+L+ + N W +P
Sbjct: 265 YAELFVQEVRRFY--PFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 322
Query: 322 KFKPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+F+PERF + D +FIP G G C G+ +V + ++N P
Sbjct: 323 EFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
Query: 378 NMD 380
+ D
Sbjct: 380 DQD 382
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 265 YTEALVFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
Y E V E R P P V A++D G + +G V+L+ + N W +P
Sbjct: 273 YAELFVQEVRRFY--PFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 322 KFKPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+F+PERF + D +FIP G G C G+ +V + ++N P
Sbjct: 331 EFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
Query: 378 NMD 380
+ D
Sbjct: 388 DQD 390
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 265 YTEALVFETLRICASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
Y E V E R P P V A++D G + +G V+L+ + N W +P
Sbjct: 273 YAELFVQEVRRFY--PFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 322 KFKPERFISQDGIVVKPSHFIPFGTG----KRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+F+PERF + D +FIP G G C G+ +V + ++N P
Sbjct: 331 EFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
Query: 378 NMD 380
+ D
Sbjct: 388 DQD 390
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 263 MPYTEALVFETLRICA-SPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPT 321
+P +A + ETLR+ S + D + Y + T+V + + + ++ P
Sbjct: 335 VPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPD 394
Query: 322 KFKPERFISQDGIVVKPSHF--IPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNM 379
KF P R++S+D ++ HF + FG G R C+G+++ + + IL ++ V ++
Sbjct: 395 KFDPTRWLSKDKDLI---HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHI 451
Query: 380 DELKLVPACVALP 392
++ + + P
Sbjct: 452 GDVDTIFNLILTP 464
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 300 GTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPS-HFIPFGTGKRTCIGQKLVT 358
GT ++L+ + T L++ + F+PERF+ + G PS + PFG G+R C+G+
Sbjct: 289 GTTLVLSPY--VTQRLHFPDGEAFRPERFLEERGT---PSGRYFPFGLGQRLCLGRDFAL 343
Query: 359 DFTFIVITSILNHY---DVSYPN-MDELKLVPACVALPAETYE 397
IV+ + + + +P + ++ L P LPA E
Sbjct: 344 LEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEG-GLPARPRE 385
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 37/181 (20%)
Query: 233 KNPHCIDKIRQEIDAV----------TGGLRDVCMDDKYKMPYTEALVFETLRICASPIV 282
KNP + +R E++++ T L +D P ++++ E+LR+ A+P +
Sbjct: 291 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLD---STPVLDSVLSESLRLTAAPFI 347
Query: 283 PHVATEDTTVA-----GYSVCKGTVVILNNFDLNTSD--LYWDEPTKFKPERFISQDGIV 335
D + +++ +G ++L F D +Y D P FK RF++ DG
Sbjct: 348 TREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTD-PEVFKYNRFLNPDGSE 406
Query: 336 VK---------PSHFIPFGTGKRTCIGQKL----VTDFTFIVITSI---LNHYDVSYPNM 379
K ++ +P+G G C+G+ + F F+V+ + L + DV P
Sbjct: 407 KKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEF 466
Query: 380 D 380
D
Sbjct: 467 D 467
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 37/181 (20%)
Query: 233 KNPHCIDKIRQEIDAV----------TGGLRDVCMDDKYKMPYTEALVFETLRICASPIV 282
KNP + +R E++++ T L +D P ++++ E+LR+ A+P +
Sbjct: 279 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLD---STPVLDSVLSESLRLTAAPFI 335
Query: 283 PHVATEDTTVA-----GYSVCKGTVVILNNFDLNTSD--LYWDEPTKFKPERFISQDGIV 335
D + +++ +G ++L F D +Y D P FK RF++ DG
Sbjct: 336 TREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTD-PEVFKYNRFLNPDGSE 394
Query: 336 VK---------PSHFIPFGTGKRTCIGQKL----VTDFTFIVITSI---LNHYDVSYPNM 379
K ++ +P+G G C+G+ + F F+V+ + L + DV P
Sbjct: 395 KKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEF 454
Query: 380 D 380
D
Sbjct: 455 D 455
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 285 VATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPF 344
VAT D + G + KG V+ + + + +EP +F I +P+ + F
Sbjct: 291 VATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAF 341
Query: 345 GTGKRTCIGQKLV 357
G G CIGQ+L
Sbjct: 342 GFGAHQCIGQQLA 354
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 285 VATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPF 344
VAT D + G + KG V+ + + + +EP +F I +P+ + F
Sbjct: 291 VATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAF 341
Query: 345 GTGKRTCIGQKLV 357
G G CIGQ+L
Sbjct: 342 GFGAHQCIGQQLA 354
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 285 VATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPF 344
VAT D + G + KG V+ + + + +EP +F I +P+ + F
Sbjct: 291 VATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAF 341
Query: 345 GTGKRTCIGQKLV 357
G G CIGQ+L
Sbjct: 342 GFGAHQCIGQQLA 354
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 26/157 (16%)
Query: 214 IGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFET 273
I GH NL+ ++ L+++P + K+R+ D + G + C+ +Y+ P
Sbjct: 233 IAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLI-GTAVEECL--RYESP--------- 280
Query: 274 LRICASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDG 333
+ + VA+ED + G ++ +G V L N + P F
Sbjct: 281 -----TQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD--------- 326
Query: 334 IVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
I P+ + FG G C+G L I I ++L
Sbjct: 327 ITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQ 363
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 29/171 (16%)
Query: 189 DALLQYFREDEELSWDHIMFDLED-FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDA 247
D L+ D++L+ D ++ + ++ IGG+ + + + L P + +R
Sbjct: 227 DDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRD---- 282
Query: 248 VTGGLRDVCMDDKYKMPYTEALVFETLRICASPI-VPHVATEDTTVAGYSVCKGTVVILN 306
G DV + +V E LR + + V V T D T+ G + GT V+
Sbjct: 283 ---GSADV-----------DTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAW 328
Query: 307 NFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLV 357
N +D+P F P R KP+ I FG G C+G L
Sbjct: 329 LPAANRDPAEFDDPDTFLPGR---------KPNRHITFGHGMHHCLGSALA 370
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 236 HCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVATEDTTV--- 292
++IR I + G +V ++ +MP T+++V+E+LRI P+ P +
Sbjct: 302 QLAEEIRGAIKSYGDG--NVTLEAIEQMPLTKSVVYESLRI-EPPVPPQYGKAKSNFTIE 358
Query: 293 ---AGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKR 349
A + V KG ++ +D P ++ P+RF+ ++K ++ + G
Sbjct: 359 SHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLK---YVWWSNGPE 415
Query: 350 T---------CIGQKLVTDFTFIVITSILNHYD 373
T C G+ V T + + + YD
Sbjct: 416 TESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 40/213 (18%)
Query: 182 DHPRDFTDALLQYFREDEELSWDHIMFDLEDFIG------GHAALGNLVMLILIYLMKNP 235
++P T + + R ++ ++ H+ +L IG G + G+ + LI L++ P
Sbjct: 194 ENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 253
Query: 236 HCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVATEDTTVAGY 295
+ + ++ + + G+ ++ + + + + L P +AT D V
Sbjct: 254 QLRNLLHEKPELIPAGVEELL---RINLSFADGL-------------PRLATADIQVGDV 297
Query: 296 SVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVV---KPSHFIPFGTGKRTCI 352
V KG +V L E F PE F + I + P+ + FG G+ C+
Sbjct: 298 LVRKGELV-----------LVLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCL 346
Query: 353 GQKLVTDFTFIVITSILNHY---DVSYPNMDEL 382
G L I I ++L D++ P +D+L
Sbjct: 347 GSALGRRHAQIGIEALLKKMPGVDLAVP-IDQL 378
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 228 LIYLMKNPHCIDKIRQEI--------DAVTGGLRDVCMDDK--YKMPYTEALVFETLRIC 277
L +++NP + +E+ V+ +C+ +P ++++ E+LR+
Sbjct: 281 LFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLS 340
Query: 278 ASPIVPHVATEDTTV----AGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDG 333
++ + A ED T+ Y++ K ++ L ++ + +P FK +R++ ++G
Sbjct: 341 SASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENG 400
Query: 334 IVVK---------PSHFIPFGTGKRTCIGQ 354
+++PFG+G C G+
Sbjct: 401 KTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 228 LIYLMKNPHCIDKIRQEI--------DAVTGGLRDVCMDDK--YKMPYTEALVFETLRIC 277
L +++NP + +E+ V+ +C+ +P ++++ E+LR+
Sbjct: 281 LFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLS 340
Query: 278 ASPIVPHVATEDTTV----AGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDG 333
++ + A ED T+ Y++ K ++ L ++ + +P FK +R++ ++G
Sbjct: 341 SASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENG 400
Query: 334 IVVK---------PSHFIPFGTGKRTCIGQ 354
+++PFG+G C G+
Sbjct: 401 KTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 213 FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
I GH ++ L +I L+ +P +R + V G V E
Sbjct: 242 LIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGA------------------VEE 283
Query: 273 TLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR A + VAT D V G + G VI+ N N +++P R
Sbjct: 284 LLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--- 340
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
H + FG G C+GQ L +++ ++++
Sbjct: 341 ------SARHHLAFGFGVHQCLGQNLARLELEVILNALMD 374
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 213 FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
I GH ++ L +I L+ +P +R + V G V E
Sbjct: 242 LIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGA------------------VEE 283
Query: 273 TLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR A + VAT D V G + G VI+ N N +++P R
Sbjct: 284 LLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--- 340
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
H + FG G C+GQ L +++ ++++
Sbjct: 341 ------SARHHLAFGFGVHQCLGQNLARLELEVILNALMD 374
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 213 FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
I GH ++ L +I L+ +P +R + V G V E
Sbjct: 242 LIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGA------------------VEE 283
Query: 273 TLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR A + VAT D V G + G VI+ N N +++P R
Sbjct: 284 LLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--- 340
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
H + FG G C+GQ L +++ ++++
Sbjct: 341 ------SARHHLAFGFGVHQCLGQNLARLELEVILNALMD 374
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 213 FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
I GH ++ L +I L+ +P +R + V G V E
Sbjct: 242 LIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGA------------------VEE 283
Query: 273 TLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR A + VAT D V G + G VI+ N N +++P R
Sbjct: 284 LLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--- 340
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILN 370
H + FG G C+GQ L +++ ++++
Sbjct: 341 ------SARHHLAFGFGVHQCLGQNLARLELEVILNALMD 374
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 299 KGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGK----RTCIGQ 354
KGT V+L+ + N WD P +F+PERF ++ + IP G G C G+
Sbjct: 310 KGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFD---MIPQGGGHAEKGHRCPGE 366
Query: 355 KLVTDFTFIVITSILNHYDVSYPNMDELKLVPACVALPAETYELEFTLRK 404
+ + + +++ + P + +LP + + RK
Sbjct: 367 GITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK 416
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 29/161 (18%)
Query: 214 IGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFET 273
+GG+ N + ++ L KNP K+ K E +V E
Sbjct: 264 VGGNDTTRNSMTGGVLALHKNPDQFAKL------------------KANPALVETMVPEI 305
Query: 274 LRICASPI--VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQ 331
+R +P+ + A D+ + G ++ KG V++ + N D D P +F +R
Sbjct: 306 IR-WQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR---- 360
Query: 332 DGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+P + FG G C+G +L I+ IL +
Sbjct: 361 ----PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 265 YTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTK 322
+ EA+ FE SP+ T D +AG ++ +G V++ N WD+P +
Sbjct: 288 FEEAVRFE------SPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDR 341
Query: 323 FKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSIL 369
+ I K S + FG+G C+GQ LV V+ + L
Sbjct: 342 YD---------ITRKTSGHVGFGSGVHMCVGQ-LVARLEGEVVLAAL 378
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 284 HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIP 343
A DT + G + G ++LN N + EP KF P R ++ +
Sbjct: 341 RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANR---------HLA 391
Query: 344 FGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
FG G C+G L +++ +L+ D
Sbjct: 392 FGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3PJW|A Chain A, Structure Of Pseudomonas Fluorescence Lapd Ggdef-Eal Dual
Domain, I23
pdb|3PJX|A Chain A, Structure Of Pseudomonas Fluorescence Lapd Ggdef-Eal Dual
Domain, P32
Length = 430
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 70/193 (36%), Gaps = 52/193 (26%)
Query: 97 AFSNMFTQYLCSTRFDY--------EDKQLQTMVRNFDEIFYEINQGHPVD-FLPWLNPF 147
A+ + Q L RF+ +D QL + + E Q P FLPWL F
Sbjct: 194 AWHRLLDQALNQRRFELFFQPVVAAQDTQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERF 253
Query: 148 FSKHMNKIAGWANEIREIMLERIIKQ---HLDTVDYDDHPRDFTD--ALLQYFR------ 196
GW + +MLER+++Q H +++ + D AL + F
Sbjct: 254 ---------GWTARLDRLMLERVLEQMAGHEESLALNLSSATLADPQALNKVFEILRAHS 304
Query: 197 ----------EDEELSWDHIM-------------FDLEDFIGGHAALGNLVMLILIYLMK 233
+E+L ++ L+ F G + +GNL L L YL
Sbjct: 305 NLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKI 364
Query: 234 NPHCIDKIRQEID 246
+ I I QE D
Sbjct: 365 DGSYIRAIDQESD 377
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 284 HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIP 343
V T DT G ++C G ++L N + + EP KF +R P+ +
Sbjct: 282 RVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR---------NPNSHLA 332
Query: 344 FGTGKRTCIGQKLV 357
FG G C+G +L
Sbjct: 333 FGFGTHFCLGNQLA 346
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A ED + G + KG V+++ N + ++
Sbjct: 277 YKKERPETAADEIVR-WATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFE 335
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPF-GTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+P F I+ P+ + F GTG CIG L ++ +I +
Sbjct: 336 DPHTFN---------ILRSPNPHVGFGGTGAHYCIGANLARMTINLIFNAIAD------- 379
Query: 378 NMDELKLVPA 387
NM +LK + A
Sbjct: 380 NMPDLKPIGA 389
>pdb|3PJT|A Chain A, Structure Of Pseudomonas Fluorescence Lapd Eal Domain
Complexed With C-Di-Gmp, C2221
pdb|3PJT|B Chain B, Structure Of Pseudomonas Fluorescence Lapd Eal Domain
Complexed With C-Di-Gmp, C2221
pdb|3PJU|A Chain A, Structure Of Pseudomonas Fluorescence Lapd Eal Domain
Complexed With C-Di-Gmp, P6522
Length = 249
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 70/193 (36%), Gaps = 52/193 (26%)
Query: 97 AFSNMFTQYLCSTRFDY--------EDKQLQTMVRNFDEIFYEINQGHPVD-FLPWLNPF 147
A+ + Q L RF+ +D QL + + E Q P FLPWL F
Sbjct: 13 AWHRLLDQALNQRRFELFFQPVVAAQDTQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERF 72
Query: 148 FSKHMNKIAGWANEIREIMLERIIKQ---HLDTVDYDDHPRDFTD--ALLQYFR------ 196
GW + +MLER+++Q H +++ + D AL + F
Sbjct: 73 ---------GWTARLDRLMLERVLEQMAGHEESLALNLSSATLADPQALNKVFEILRAHS 123
Query: 197 ----------EDEELSWDHIM-------------FDLEDFIGGHAALGNLVMLILIYLMK 233
+E+L ++ L+ F G + +GNL L L YL
Sbjct: 124 NLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKI 183
Query: 234 NPHCIDKIRQEID 246
+ I I QE D
Sbjct: 184 DGSYIRAIDQESD 196
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 224 VMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVP 283
+ L++ +L+ NP ++ + + V R + +YK P ++P
Sbjct: 278 LALMIYHLLNNPEQMNDVLADRSLVP---RAIAETLRYKPPVQ--------------LIP 320
Query: 284 HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERF-ISQDGIVVKPSHFI 342
++DT V G + K T+V N +++P F R + + +
Sbjct: 321 RQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHL 380
Query: 343 PFGTGKRTCIGQKLVTDFTFIVITSILN 370
FG+G C+G + IV +L+
Sbjct: 381 AFGSGIHNCVGTAFAKNEIEIVANIVLD 408
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 29/145 (20%)
Query: 215 GGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETL 274
G +++ L + L+ P ++R++ D MP A V E L
Sbjct: 249 AGRETTTSMIALSTLLLLDRPELPAELRKDPDL---------------MP---AAVDELL 290
Query: 275 RI--CASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQD 332
R+ A I VA ED ++G +V VI N +D+P + F D
Sbjct: 291 RVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVD---FHRTD 347
Query: 333 GIVVKPSHFIPFGTGKRTCIGQKLV 357
+H + FG G C+GQ L
Sbjct: 348 ------NHHVAFGYGVHQCVGQHLA 366
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 239 DKIRQEIDAV---TGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHV--ATEDTTVA 293
+++ +EI +V GG ++ M KM T+++V+E LR P+ A +D +
Sbjct: 319 NRLAEEIRSVIKSNGG--ELTMGAIEKMELTKSVVYECLRF-EPPVTAQYGRAKKDLVIE 375
Query: 294 GYSVC---KGTVVILNNFDLNTSD-LYWDEPTKFKPERFISQDGIVV--------KPSHF 341
+ K ++ L T D +D +F PERF+ ++G + P
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETE 435
Query: 342 IPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
P G + C G+ V + + I YD
Sbjct: 436 TP-TVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 239 DKIRQEIDAV---TGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHV--ATEDTTVA 293
+++ +EI +V GG ++ M KM T+++V+E LR P+ A +D +
Sbjct: 319 NRLAEEIRSVIKSNGG--ELTMGAIEKMELTKSVVYECLRF-EPPVTAQYGRAKKDLVIE 375
Query: 294 GYSVC---KGTVVILNNFDLNTSD-LYWDEPTKFKPERFISQDGIVV--------KPSHF 341
+ K ++ L T D +D +F PERF+ ++G + P
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETE 435
Query: 342 IPFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
P G + C G+ V + + I YD
Sbjct: 436 TP-TVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A D ++G + KG V++ N + +
Sbjct: 284 YKKVRPETAADEIVR-WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQ 342
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPFG-TGKRTCIGQKLVTDFTFIVITSILNH 371
+P F I+ P+ + FG TG CIG L ++ ++ +H
Sbjct: 343 DPFTFN---------ILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 387
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A D ++G + KG V++ N + +
Sbjct: 285 YKKVRPETAADEIVR-WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQ 343
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPFG-TGKRTCIGQKLVTDFTFIVITSILNH 371
+P F I+ P+ + FG TG CIG L ++ ++ +H
Sbjct: 344 DPFTFN---------ILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 388
>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
pdb|3ZWL|D Chain D, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
Length = 369
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 19/89 (21%)
Query: 221 GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASP 280
GN + IL +MKNP I+ E D+ T L V + +K
Sbjct: 127 GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK------------------ 168
Query: 281 IVPHVATEDTTVAGYSVCKGTVVILNNFD 309
I+ H + TVAG+S KG +I + D
Sbjct: 169 IITHEGLDAATVAGWST-KGKYIIAGHKD 196
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A D ++G + KG V++ N + +
Sbjct: 301 YKKVRPETAADEIVR-WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQ 359
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPFG-TGKRTCIGQKLVTDFTFIVITSILNH 371
+P F I+ P+ + FG TG CIG L ++ ++ +H
Sbjct: 360 DPFTFN---------ILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 404
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A D ++G + KG V++ N + +
Sbjct: 294 YKKVRPETAADEIVR-WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQ 352
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPFG-TGKRTCIGQKLVTDFTFIVITSILNH 371
+P F I+ P+ + FG TG CIG L ++ ++ +H
Sbjct: 353 DPFTFN---------ILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 397
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 261 YKMPYTEALVFETLRICASPIVP--HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD 318
YK E E +R A+P+ A D ++G + KG V++ N + +
Sbjct: 292 YKKVRPETAADEIVR-WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQ 350
Query: 319 EPTKFKPERFISQDGIVVKPSHFIPFG-TGKRTCIGQKLVTDFTFIVITSILNH 371
+P F I+ P+ + FG TG CIG L ++ ++ +H
Sbjct: 351 DPFTFN---------ILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADH 395
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 25/173 (14%)
Query: 186 DFTDALLQYFREDEELSWDHIM-FDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQE 244
D AL+Q + + LS ++ + + G+ + + + LM P
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPE-------- 275
Query: 245 IDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVATEDTTVAGYSVCKGTVVI 304
LR +D +P + + + VP A ED T+ G ++ G V+
Sbjct: 276 -------LRRQLLDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVL 328
Query: 305 LNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLV 357
+ N + + + +R P+ + FG G C+G L
Sbjct: 329 ASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHGVHHCLGAPLA 372
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 176 DTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMK 233
D D DD P+ F D + +F+ +EL I+ +E + G AA ++ I +Y K
Sbjct: 126 DWKDIDDVPKAFLDEIAHFFKRYKELQGKEII--VEGWEGAEAAKREILRAIEMYKEK 181
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,471,511
Number of Sequences: 62578
Number of extensions: 527068
Number of successful extensions: 1762
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1451
Number of HSP's gapped (non-prelim): 164
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)