RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14858
(405 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 207 bits (528), Expect = 3e-62
Identities = 117/427 (27%), Positives = 197/427 (46%), Gaps = 33/427 (7%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGG-----PLALCDWSSLQE-------KRRRIARK 48
+G P +V++ E +KE+LI +G F G A L + R R R+
Sbjct: 41 LGPKPVVVLSGPEAVKEVLIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWRQLRR 100
Query: 49 YCSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCS 108
+ +P S E L++ + K + I LL A N+ L
Sbjct: 101 FLTPTFTSFGKLSFEPRVEEEARDLVEKLRKTAGE-PGVIDITDLLFRAALNVICSILFG 159
Query: 109 TRFD-YEDKQLQTMVRNFDEIFYEINQ--GHPVDFLPWLNPFFSKHMNKIAGWANEIREI 165
RF ED + +V+ E+ ++ +D P L F H K+ +I+++
Sbjct: 160 ERFGSLEDPKFLELVKAVQELSSLLSSPSPQLLDLFPILKYFPGPHGRKLKRARKKIKDL 219
Query: 166 MLERIIKQHLDTVDYDDH-PRDFTDALL--QYFREDEELSWDHIM---FDLEDFIGGHAA 219
+ + +I++ +T+D PRDF DALL + + +L+ + + +L F G
Sbjct: 220 LDK-LIEERRETLDSAKKSPRDFLDALLLAKEEEDGSKLTDEELRATVLEL--FFAGTDT 276
Query: 220 LGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICAS 279
+ + L L K+P +K+R+EID V G R DD MPY +A++ ETLR+
Sbjct: 277 TSSTLSWALYELAKHPEVQEKLREEIDEVIGDKRSPTYDDLQNMPYLDAVIKETLRL--H 334
Query: 280 PIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIV 335
P+VP T+DT + GY + KGT+VI+N + L+ + P +F PERF+ ++G
Sbjct: 335 PVVPLLLPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDENGKF 394
Query: 336 VKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP--NMDELKLVPACVALPA 393
K F+PFG G R C+G++L + + ++L +++V P + LP
Sbjct: 395 RKSFAFLPFGAGPRNCLGERLARMEMKLFLATLLQNFEVELPPGTDPPDIDETPGLLLPP 454
Query: 394 ETYELEF 400
+ Y+L+F
Sbjct: 455 KPYKLKF 461
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 122 bits (308), Expect = 1e-30
Identities = 107/418 (25%), Positives = 175/418 (41%), Gaps = 54/418 (12%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFG---------------GPLALCDWSSLQEKRRRI 45
+G+ I + ELI+EIL+ Q +F G +AL ++ RRI
Sbjct: 72 LGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRI 131
Query: 46 ARKYCSPRIISSN-YQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFS-NMFT 103
C ++++ + +K E L++ + + +G K V ++ +L AFS N T
Sbjct: 132 ----CMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTG-KPVNLREVL-GAFSMNNVT 185
Query: 104 QYLCSTRFDYEDKQLQTMVRNFDEIFYE-------INQGHPVDFLPWLNPF-FSKHMNKI 155
+ L ++ + F I +E I G + WL+P+ K M ++
Sbjct: 186 RMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREV 245
Query: 156 AGWANEIREIMLERIIKQHLDTVDYD---DHPRDFTDALLQYFREDEELSWD--HIMFDL 210
+E + +II +H DF D LL E+ + D I +
Sbjct: 246 EKRVDEFHD----KIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALM 301
Query: 211 EDFIGG----HAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYT 266
+D I A M +I KNP + KI++E+D+V G R V D + Y
Sbjct: 302 QDMIAAATDTSAVTNEWAMAEVI---KNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYL 358
Query: 267 EALVFETLRI-CASP-IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFK 324
+V ET R+ A P ++PH + TT+ GY + T V +N L + WD+ +F+
Sbjct: 359 RCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFR 418
Query: 325 PERFISQDGIVVKPSH-----FIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
PER +G V+ SH +PF GKR C G L + + + + +D S P
Sbjct: 419 PERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPP 476
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 117 bits (295), Expect = 6e-29
Identities = 78/337 (23%), Positives = 158/337 (46%), Gaps = 30/337 (8%)
Query: 79 KRILSGNKSVKIKPLLQS-AFSNMFTQYLCSTRFDYEDK----QLQTMVRNFDEIFYEIN 133
K+I S ++ + + L S MF +Y+ + +++ +L ++ +++F ++
Sbjct: 155 KKIESSGETFEPRYYLTKFTMSAMF-KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLG 213
Query: 134 QGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQ 193
G D + P + +++ +I++ + E+ +HL T+D + PRD D L++
Sbjct: 214 SGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKY-HEHLKTIDPEV-PRDLLDLLIK 271
Query: 194 YF---REDEELSWDHIMFDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTG 250
+ +D+ LS + D F+ G + +++ L P +K EI +
Sbjct: 272 EYGTNTDDDILSILATILDF--FLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN 329
Query: 251 GLRDVCMDDKYKMPYTEALVFETLRICA-SPI-VPHVATEDTTVA-GYSVCKGTVVILNN 307
G V + D+ PYT A++ ETLR SP +P + D + G+ + K +++N
Sbjct: 330 GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINY 389
Query: 308 FDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITS 367
+ L ++ Y++ P +F P RF++ D F+PF G R C+GQ+ D ++ ++
Sbjct: 390 YSLGRNEKYFENPEQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSN 445
Query: 368 ILNHYDVSYPNMDELKLVPACVALPAETYELEFTLRK 404
I+ ++ + ++D K+ ET E TL+
Sbjct: 446 IILNFKLK--SIDGKKI--------DETEEYGLTLKP 472
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 114 bits (286), Expect = 1e-27
Identities = 99/390 (25%), Positives = 175/390 (44%), Gaps = 40/390 (10%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIA-----------RKY 49
MG + V+S E+ +++L VQ S+F A S L R +A RK
Sbjct: 76 MGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKL 135
Query: 50 CSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCST 109
C ++ S E +++++ I K V I L+ + N+ + +
Sbjct: 136 CVMKLFSRKRAESWASVRDEVDSMVRSVSSNI---GKPVNIGELIFTLTRNITYRAAFGS 192
Query: 110 RFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLER 169
+ + +++ F ++F N DF+PWL + +NK A + + ++
Sbjct: 193 SSNEGQDEFIKILQEFSKLFGAFNVA---DFIPWLGWIDPQGLNKRLVKARKSLDGFIDD 249
Query: 170 IIKQHL------DTVDY-DDHPRDFTDALLQYFREDE------------ELSWDHIMFDL 210
II H+ + + ++ D D LL ++ E+ +L+ D+I +
Sbjct: 250 IIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAII 309
Query: 211 EDFI-GGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEAL 269
D + GG + + + + LMK+P + +++QE+ V G R V D K+ Y +
Sbjct: 310 MDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCT 369
Query: 270 VFETLRICAS-PIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERF 328
+ ETLR+ P++ H ED VAGY + K + V++N + + W++P FKP RF
Sbjct: 370 LKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRF 429
Query: 329 ISQDGIVVKPSH--FIPFGTGKRTCIGQKL 356
+ K SH FIPFG+G+R+C G +L
Sbjct: 430 LKPGVPDFKGSHFEFIPFGSGRRSCPGMQL 459
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 104 bits (260), Expect = 3e-24
Identities = 102/414 (24%), Positives = 184/414 (44%), Gaps = 50/414 (12%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFG------------GPLALCDWSSLQEKRRRIARK 48
MG +VV+S EL KE+L QG FG G ++ + R++ R
Sbjct: 71 MGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRI 130
Query: 49 YCSPRIISSNYQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCS 108
P + Q E ++++ + + + V I+ LQ N+ + +
Sbjct: 131 MTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFD 190
Query: 109 TRFDYEDKQLQTMVRNFD------EIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEI 162
RF+ ED L ++ + +E N G DF+P L PF ++ ++
Sbjct: 191 RRFESEDDPLFLKLKALNGERSRLAQSFEYNYG---DFIPILRPFLRGYLKI----CQDV 243
Query: 163 REIML---------ERIIKQHLDTVDYDDHP-RDFTDALLQYFREDEELSWDHIMFDLED 212
+E L ER K+ + D + D +L+ ++ E ++ D++++ +E+
Sbjct: 244 KERRLALFKDYFVDER--KKLMSAKGMDKEGLKCAIDHILEAQKKGE-INEDNVLYIVEN 300
Query: 213 FIGGHAALGNLVMLI---LIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEAL 269
AA+ + I + L+ +P K+R E+D V G V D +K+PY +A+
Sbjct: 301 I--NVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAV 358
Query: 270 VFETLRICASPI---VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPE 326
V ETLR+ I VPH+ ED + GY + + +++N + L + W P +F+PE
Sbjct: 359 VKETLRL-HMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE 417
Query: 327 RFISQDGIV---VKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
RF+ ++ V F+PFG G+R+C G L IV+ ++ ++++ P
Sbjct: 418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPP 471
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 97.6 bits (243), Expect = 5e-22
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 35/319 (10%)
Query: 88 VKIKPLLQSAFSNMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEI-------NQGHPVDF 140
V + +L + +NM Q + S R +E K ++ F ++ E+ N G +
Sbjct: 169 VVVPEMLTFSMANMIGQVILSRRV-FETKGSES--NEFKDMVVELMTTAGYFNIGDFIPS 225
Query: 141 LPWLN----PFFSKHMNKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALL--QY 194
+ W++ KH++K +L R+I++H + DF D ++ Q
Sbjct: 226 IAWMDIQGIERGMKHLHKKFDK-------LLTRMIEEHTASAHERKGNPDFLDVVMANQE 278
Query: 195 FREDEELSWDHIMFDLED-FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLR 253
E+L+ +I L + F G +++ L ++KNP + + +E+D V G R
Sbjct: 279 NSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNR 338
Query: 254 DVCMDDKYKMPYTEALVFETLRICAS-PI-VPHVATEDTTVAGYSVCKGTVVILNNFDLN 311
+ D K+PY +A+ E+ R S P+ +P V+T+ V GY + K T + +N + +
Sbjct: 339 RLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIG 398
Query: 312 TSDLYWDEPTKFKPERFISQDGIVVKPS----HFIPFGTGKRTCIGQKLVTDFTFIVITS 367
W+ P +F+PERF+S+ + P IPFG G+R C G ++ ++ +
Sbjct: 399 RDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGT 458
Query: 368 ILNHYDVSYP-----NMDE 381
+++ +D P NMDE
Sbjct: 459 LVHSFDWKLPDGVELNMDE 477
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 96.0 bits (239), Expect = 8e-22
Identities = 58/278 (20%), Positives = 99/278 (35%), Gaps = 52/278 (18%)
Query: 111 FDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIREIMLERI 170
+ ++R D + ++ + + E+ L +
Sbjct: 157 LGVPLEDRPQLLRWSDALLLRLDPDLGPEEPWR----------RARAARRELDA-YLRAL 205
Query: 171 IKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLEDFI-----GGHAALGNLVM 225
I + PRD +LL +D ++ D + GH N +
Sbjct: 206 IAERRA------APRDDLLSLLLSAEDDGGGRLSDD--EIRDELITLLVAGHETTANALA 257
Query: 226 LILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICAS-PIVPH 284
L L+++P + K+R E D P EA+V ETLR+ P+
Sbjct: 258 WALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARR 301
Query: 285 VATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPF 344
VATED + GY + GTVV+L+ N + +P +F PERF + +PF
Sbjct: 302 VATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFNNA---------HLPF 352
Query: 345 GTGKRTCIGQKLV-TDFTFIVITSILNHYDVSYPNMDE 381
G G C+G L + + + +L + +
Sbjct: 353 GGGPHRCLGAALARLELK-VALAELLRRFPLLLLAEPP 389
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 95.2 bits (236), Expect = 3e-21
Identities = 99/413 (23%), Positives = 183/413 (44%), Gaps = 48/413 (11%)
Query: 1 MGTTPCIVVNSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIARKYCSP-----RII 55
+G+ +V++S EL KE+L Q F + RR +A + +P R +
Sbjct: 70 IGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKM 129
Query: 56 SSNYQLMSKISLIETPILLKAIHKRIL-----SGNKS--VKIKPLLQSAFSNMFTQYLCS 108
N+ L S + + + +R++ + +KS V I L+ + F+N +C
Sbjct: 130 GMNH-LFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLT-FTN---SVVCR 184
Query: 109 TRFDYEDKQLQTMVRNFDEIFYE----INQGHPVDFLPWLNPFFSKHMNKIAGWANEIRE 164
F + + ++ F +I Y + + DF P + ++ ++G ++E
Sbjct: 185 QAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFP-----YCGFLDDLSGLTAYMKE 239
Query: 165 IM------LERIIKQHLDTVDYDDHPRDFTDALLQYFRED---EELSWDHIMFDLEDFI- 214
++ ++ + LD D L++ ++E E + D++ + D +
Sbjct: 240 CFERQDTYIQEVVNETLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVV 299
Query: 215 GGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTG--GLRDVCMDDKYKMPYTEALVFE 272
G V+ + YLMK P + K + E+ G V DD +PY ALV E
Sbjct: 300 AGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKE 359
Query: 273 TLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD-EPTKFKPER 327
TLRI P++P +DT +AGY + GT V +N + ++ + W P +F+PER
Sbjct: 360 TLRI--EPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPER 417
Query: 328 FISQDGIVVKPS--HFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN 378
F+ ++ + K + FIPFG+G+R C G +L + ++L +++ PN
Sbjct: 418 FLEKE-VDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPN 469
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 93.7 bits (233), Expect = 1e-20
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 37/259 (14%)
Query: 123 RNFDEIFYEINQGHPV----DFLP---WLNPFFSKHMNKIAGWANEIREI------MLER 169
R F E+ E+ Q V DF+P WL+ G +++ + M+
Sbjct: 204 REFKEMVVELMQLAGVFNVGDFVPALRWLDL---------QGVVGKMKRLHRRFDAMMNG 254
Query: 170 IIKQH-LDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFD-------LEDFIGGHAALG 221
II++H + +D LL RE + + D L F G
Sbjct: 255 IIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTS 314
Query: 222 NLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICAS-P 280
+ V + L+++P + K ++E+DAV G R V D ++ Y +A++ ET R+ S P
Sbjct: 315 STVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTP 374
Query: 281 I-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFI---SQDGIVV 336
+ +P +A E+ + GY + KG +++N + + W +P +F+P+RF+ G+ V
Sbjct: 375 LSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDV 434
Query: 337 KPSHF--IPFGTGKRTCIG 353
K S F IPFG G+R C G
Sbjct: 435 KGSDFELIPFGAGRRICAG 453
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 93.3 bits (232), Expect = 1e-20
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 231 LMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICA-SPIVP-HVATE 288
L KNP +++ +EI V G R V +D +PY A+ ETLR + P++P E
Sbjct: 289 LAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHE 347
Query: 289 DTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGK 348
DTT+ GY + GT + +N + N W+ P ++ PERF+ + + FG GK
Sbjct: 348 DTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGK 407
Query: 349 RTCIGQKLVTDFTFIVITSI 368
R C G I +I
Sbjct: 408 RVCAG---SLQAMLIACMAI 424
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 90.9 bits (225), Expect = 8e-20
Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 42/402 (10%)
Query: 8 VVNSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIA-----------RKYCSPRIIS 56
V++S EL KE+L Q F L ++ + R + RK C + S
Sbjct: 76 VISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFS 135
Query: 57 SN-YQLMSKISLIETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCSTRFDYED 115
N + E ++ I+K + +V + LL S F+N +C F
Sbjct: 136 PNRVASFRPVREEECQRMMDKIYKAA-DQSGTVDLSELLLS-FTNCV---VCRQAFGKRY 190
Query: 116 KQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHMNKIAGWANEIR------EIMLER 169
+ T ++ F +I YE F L P+F ++ + G + ++ + L+
Sbjct: 191 NEYGTEMKRFIDILYETQALLGTLFFSDLFPYFG-FLDNLTGLSARLKKAFKELDTYLQE 249
Query: 170 IIKQHLDTVDYDDHPRDFTDALLQYFREDE-ELSWDH-----IMFDLEDFIGGHAALGNL 223
++ + LD F D L+Q +++ + + H ++ D+ + G +
Sbjct: 250 LLDETLDPNRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDI--VVPGTDTAAAV 307
Query: 224 VMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVP 283
V+ + YL+K P + K + E+ V G V +D +PY +A++ E+LR+ P++P
Sbjct: 308 VVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRL--EPVIP 365
Query: 284 ---HVAT-EDTTVAGYSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFISQ-DGIVVK 337
H T D + GY + T++ +N + ++ W D P +F PERF+ + G+ K
Sbjct: 366 ILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFK 425
Query: 338 PSHF--IPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
F +PFG+G+R C L I ++L +D S P
Sbjct: 426 GQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLP 467
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 90.4 bits (224), Expect = 1e-19
Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 15/139 (10%)
Query: 227 ILIYLMKNPHCIDKIRQEIDAVTGGLRD-VCMDDKYKMPYTEALVFETLR--ICASPIVP 283
I+ L+KNP K+ EI A TG ++ V +D +KMPY +A+V E LR A ++P
Sbjct: 329 IMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLP 388
Query: 284 HVATEDTTVAGYSVCKGTVVILNNF---DLNTSDLYWDEPTKFKPERFIS---QDGIVVK 337
H A ED V GY + KG V NF ++ + W+ P +F PERF++ +G+ V
Sbjct: 389 HKAAEDMEVGGYLIPKGATV---NFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVT 445
Query: 338 PSHFI---PFGTGKRTCIG 353
S I PFG G+R C G
Sbjct: 446 GSREIRMMPFGVGRRICAG 464
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 87.8 bits (217), Expect = 9e-19
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 222 NLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRI--CAS 279
N V + ++ P + K +EID V G R V D K+ Y +A++ E R+ A+
Sbjct: 345 NAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAA 404
Query: 280 PIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPS 339
+PHVA DTTVAGY + KG+ V+L+ + L + W +P FKPER +++ V
Sbjct: 405 FNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTE 464
Query: 340 H---FIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYP 377
+ FI F TGKR C L T T +++ +L +
Sbjct: 465 NDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLA 505
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 80.4 bits (198), Expect = 2e-16
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 231 LMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASP--IVPHVATE 288
++KNP + K +E+D V G R V D + Y +A ET RI S + PHVA +
Sbjct: 341 MLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400
Query: 289 DTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI------VVKPSHFI 342
DTT+ GY + KG+ + + L + W +P ++PER + DGI V F+
Sbjct: 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFV 460
Query: 343 PFGTGKRTCIGQKLVTDFTFIVITSILNHYD 373
F TG+R C+G K+ T +++ L ++
Sbjct: 461 SFSTGRRGCVGVKVGTIMMVMMLARFLQGFN 491
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 74.7 bits (184), Expect = 1e-14
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 216 GHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTG----GLRDVCMDDKYKMPYTEALVF 271
GH + G+L M I+L ++P + K + E + + G + + + D KM Y ++
Sbjct: 299 GHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVID 358
Query: 272 ETLR-ICASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
ETLR I S V A D V GY++ KG V+ ++ + P +F P R+
Sbjct: 359 ETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRW-- 416
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPN 378
D K F+PFG G R C G L I + L Y + N
Sbjct: 417 -DNYTPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLN 463
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 72.3 bits (177), Expect = 1e-13
Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Query: 214 IGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFET 273
I GH ++ L K P + K+++E+D+V G R ++D K+ YT ++ E+
Sbjct: 401 IAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINES 459
Query: 274 LRICASP-IVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQD 332
LR+ P ++ + E+ + GY + +G + ++ ++L+ S +WD+ KF PER+ D
Sbjct: 460 LRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERW-PLD 518
Query: 333 GIVVKPSH----FIPFGTGKRTCIGQKLVTDFTFIVITSIL 369
G ++ ++PFG G R C+G + F +V T++L
Sbjct: 519 GPNPNETNQNFSYLPFGGGPRKCVGDMFAS-FENVVATAML 558
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 71.4 bits (175), Expect = 2e-13
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 22/282 (7%)
Query: 94 LQSAFSNMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGH--PVDFLP-WLNPFFSK 150
+++ FS + + + F+Y L T ++ + + D LP W F K
Sbjct: 154 MEAKFSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCK 213
Query: 151 ---HMNKIAGWANEIREIMLE------RIIKQHLDTVDYDDHPRDFTDALLQYF-REDEE 200
K IRE + + I++ + ++ +++ D ++L++ EE
Sbjct: 214 ISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASREE 273
Query: 201 LSWDHIMFDLED-FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDD 259
+S + DL + GH G+++ L L KNP + K ++E+D V G R +D
Sbjct: 274 VSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYED 332
Query: 260 KYKMPYTEALVFETLRICASPIV--PHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYW 317
++ Y + E++R+ P V ED GY V G ++++ ++++ S W
Sbjct: 333 IKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW 392
Query: 318 DEPTKFKPERFISQDGIVVKPSH----FIPFGTGKRTCIGQK 355
+ +F PERF DG V ++ +IPF G R C+G +
Sbjct: 393 ERAEEFVPERF-DLDGPVPNETNTDFRYIPFSGGPRKCVGDQ 433
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 64.6 bits (157), Expect = 3e-11
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 184 PRDFTDALLQYFREDEELSWDHIMFDLEDFI-GGHAALGNLVMLILIYLMKNPHCIDKIR 242
D L + + E L+ + I ++ I +++ IL YL +NP ++ +
Sbjct: 243 GSSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVT 302
Query: 243 QEIDAVTGGLRD---VCMDDKYKMPYTEALVFETLRICASPIVPHV---ATEDTTVAGYS 296
+E A+ + + +D KMP T ++ ETLR+ + I+ A ED GY
Sbjct: 303 EEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVAS--ILSFTFREAVEDVEYEGYL 360
Query: 297 VCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKL 356
+ KG V+ +++ S + +P KF P RF + KP+ F+PFG G +C G +L
Sbjct: 361 IPKGWKVLPLFRNIHHSADIFSDPGKFDPSRF----EVAPKPNTFMPFGNGTHSCPGNEL 416
Query: 357 VTDFTFIVITSILNHYDVSY 376
+ I+ +++H Y
Sbjct: 417 AK----LEISVLIHHLTTKY 432
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 63.3 bits (154), Expect = 7e-11
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 213 FIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFE 272
F GH L+ L+ L NP DK+R E+ V GG +D K+ ++ E
Sbjct: 325 FFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG-ETPSVDHLSKLTLLNMVINE 383
Query: 273 TLRIC-ASPIVPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYW-DEPTKFKPERFIS 330
+LR+ + ++P +A ED + + KG + + ++ S+ W + +F P+RF
Sbjct: 384 SLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAG 443
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHY 372
+ HFIPF G R CIGQ I++ +++ +
Sbjct: 444 RP--FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKF 483
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 62.4 bits (152), Expect = 1e-10
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 166 MLERIIKQ---HLDTVDYDDH--PRDFTDALLQYFREDEELSWDHI---MFDLEDFIGGH 217
++++II++ + + D+ P+D D LL+ +EL+ D I M D+ I G
Sbjct: 209 LVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLR--DGSDELTDDLISDNMIDM--MIPGE 264
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQE------IDAVTGGLRDVCMDDKYKMPYTEALVF 271
++ L+ L + +L P + ++ +E + A TG + D +P+T+ ++
Sbjct: 265 DSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTG--EPLYWTDYMSLPFTQNVIT 322
Query: 272 ETLRICASPI-VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFIS 330
ETLR+ V A +D + GY + KG V+ ++ + +D P +F P R+
Sbjct: 323 ETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQE 382
Query: 331 QDGIVVKPSHFIPFGTGKRTCIGQKL 356
+D + S F PFG G+R C G L
Sbjct: 383 KD---MNNSSFTPFGGGQRLCPGLDL 405
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 60.8 bits (147), Expect = 5e-10
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 18/249 (7%)
Query: 146 PFFSKHMNKIAGWANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDH 205
P FS + ++ E + ++K+ + + + +D ALL D+ S +
Sbjct: 211 PLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLA---SDDGFSDEE 267
Query: 206 IM-FDLEDFIGGHAALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRD---VCMDDKY 261
I+ F + + G+ ++ L + +L + P + ++++E + + D + D
Sbjct: 268 IVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYK 327
Query: 262 KMPYTEALVFETLRICASPI--VPHVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDE 319
MP+T+ +V ETLR+ A+ I + A D V GY++ KG V + ++ Y+ +
Sbjct: 328 SMPFTQCVVNETLRV-ANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKD 386
Query: 320 PTKFKPERFISQDGIVVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV---SY 376
F P R+ S G V + F PFG G R C G +L V S+ H V S+
Sbjct: 387 ARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELAR-----VALSVFLHRLVTRFSW 441
Query: 377 PNMDELKLV 385
++ KLV
Sbjct: 442 VPAEQDKLV 450
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 57.1 bits (138), Expect = 7e-09
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 166 MLERIIKQHLDTVDYDDHPRDFTDALL-----QYFREDEELSWDHIMFDLEDFIGGHAAL 220
ML ++I++ + + D L+ +Y DEE+ D I+ L G+ +
Sbjct: 228 MLRQLIQERRASGETHT---DMLGYLMRKEGNRYKLTDEEII-DQIITIL---YSGYETV 280
Query: 221 GNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRD---VCMDDKYKMPYTEALVFETLRIC 277
M+ + YL +P + ++R+E A+ R + +D M +T A++FET R+
Sbjct: 281 STTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLA 340
Query: 278 ASPIVPHV---ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDEPTKFKPERFISQDGI 334
IV V T+D + GY + KG + + ++N + +P F P R++ D
Sbjct: 341 T--IVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWL--DKS 396
Query: 335 VVKPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDVSY 376
+ ++F FG G R C G++L + I++ L+++ Y
Sbjct: 397 LESHNYFFLFGGGTRLCPGKELGI----VEISTFLHYFVTRY 434
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 56.6 bits (136), Expect = 1e-08
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 231 LMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPH----VA 286
L K+P + KIR EI+ +D K+ Y A + E++R+ P +P A
Sbjct: 328 LSKHPQVMAKIRHEINTKFDN------EDLEKLVYLHAALSESMRL--YPPLPFNHKAPA 379
Query: 287 TEDTTVAGYSVCKGTVVILNNFDLNTSDLYWDE-PTKFKPERFISQDG-IVVKPSH-FIP 343
D +G+ V + +++ + L W E FKPER+IS +G + +PS+ F+
Sbjct: 380 KPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMA 439
Query: 344 FGTGKRTCIGQKLVTDFTFIVITSILNHYDVSYPNMDELKLVPA 387
F +G RTC+G+ L IV I+ +YD +++ +P+
Sbjct: 440 FNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPS 483
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 51.4 bits (123), Expect = 5e-07
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 162 IREIMLERI--IKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIM-FDLEDFIGGHA 218
I M ERI +K+ ++V+ DD LL + + LS + I+ L GH
Sbjct: 242 IERKMEERIEKLKEEDESVEEDD--------LLGWVLKHSNLSTEQILDLILSLLFAGHE 293
Query: 219 ALGNLVMLILIYLMKNPHCIDKIRQEIDAVT-----GGLRDVCMDDKYKMPYTEALVFET 273
+ L + +L P + ++R+E + G ++ +D KM +T+ ++ ET
Sbjct: 294 TSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINET 353
Query: 274 LRICASPIVPH-VATEDTTVAGYSVCKGTVV--ILNNFDLNTSDLYWDEPTKFKPERFIS 330
LR+ H A +D GY + G V ++ L++S +D+P F P R+
Sbjct: 354 LRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSS--LYDQPQLFNPWRWQQ 411
Query: 331 QD-------GIVVKPSHFIPFGTGKRTCIGQKL 356
+ ++F+PFG G R C G +L
Sbjct: 412 NNNRGGSSGSSSATTNNFMPFGGGPRLCAGSEL 444
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 48.5 bits (116), Expect = 4e-06
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 218 AALGNLVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDKYK-MPYTEALVFETLRI 276
+AL + L L K+P IR+E D V G ++ ++ K M Y A ++E++R
Sbjct: 311 SALTSFFWL----LSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMR- 365
Query: 277 CASPIVPHV-------ATEDTTVAGYSVCKGTVVILNNFDLNTSDLYWD-EPTKFKPERF 328
+ P V A +D G V KGT V + + + + W + +FKPER+
Sbjct: 366 ----LFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERW 421
Query: 329 ISQDGIVV--KPSHFIPFGTGKRTCIGQKLVTDFTFIVITSILNHYDV 374
+ ++G+ V P + F G R C+G+++ V +++ +D+
Sbjct: 422 L-KNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDI 468
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 48.2 bits (115), Expect = 5e-06
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 30/151 (19%)
Query: 231 LMKNPHCIDKIRQEIDA--------------------VTGGLRDVCMDDKYKMPYTEALV 270
+M NPH +K+ E+ A VT + D K+ Y A++
Sbjct: 319 IMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVI 378
Query: 271 FETLRICASPIVP----HVATEDTTVAGYSVCKGTVVILNNFDLNTSDLYW-DEPTKFKP 325
ETLR+ P VP + +D G V G +V + + + W + FKP
Sbjct: 379 TETLRL--YPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKP 436
Query: 326 ERFISQDGIV--VKPSHFIPFGTGKRTCIGQ 354
ER+I +DG+ P F F G R C+G+
Sbjct: 437 ERWI-KDGVFQNASPFKFTAFQAGPRICLGK 466
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 40.7 bits (96), Expect = 0.001
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 240 KIRQEI-DAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHV---ATEDTTV--- 292
++ +E+ AV G V KMP +++V+E LRI P VP A ED +
Sbjct: 309 RLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRI--EPPVPFQYGRAREDFVIESH 366
Query: 293 -AGYSVCKGTVVILNNFD-LNTSD-LYWDEPTKFKPERFISQDG 333
A + + KG +L + L T D +D P +F P+RF+ ++G
Sbjct: 367 DAAFEIKKGE--MLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEG 408
>gnl|CDD|219580 pfam07793, DUF1631, Protein of unknown function (DUF1631). The
members of this family are sequences derived from a
group of hypothetical proteins expressed by certain
bacterial species. The region concerned is approximately
440 amino acid residues in length.
Length = 729
Score = 30.3 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 19/72 (26%)
Query: 147 FFSKH-------MNKIA----GWANE---IREIMLERIIKQHLDTV--DYDDHPRDFTDA 190
FFS+ +N+IA GW + +R+ + +I ++ + + ++DD P F +
Sbjct: 392 FFSRGEHPARRLLNEIAEAGIGWGGDDDGLRDSLYAKI-EEIVQRILNEFDDDPSLFAEL 450
Query: 191 L--LQYFREDEE 200
L Q F E E
Sbjct: 451 LEEFQAFLEQER 462
>gnl|CDD|237186 PRK12740, PRK12740, elongation factor G; Reviewed.
Length = 668
Score = 29.7 bits (68), Expect = 3.1
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 14/53 (26%)
Query: 159 ANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLE 211
A E RE +LE + ++DD + L E EELS + I L
Sbjct: 190 AEEAREELLEALA-------EFDDE---LMEKYL----EGEELSEEEIKAGLR 228
>gnl|CDD|206733 cd04170, EF-G_bact, Elongation factor G (EF-G) family.
Translocation is mediated by EF-G (also called
translocase). The structure of EF-G closely resembles
that of the complex between EF-Tu and tRNA. This is an
example of molecular mimicry; a protein domain evolved
so that it mimics the shape of a tRNA molecule. EF-G in
the GTP form binds to the ribosome, primarily through
the interaction of its EF-Tu-like domain with the 50S
subunit. The binding of EF-G to the ribosome in this
manner stimulates the GTPase activity of EF-G. On GTP
hydrolysis, EF-G undergoes a conformational change that
forces its arm deeper into the A site on the 30S
subunit. To accommodate this domain, the peptidyl-tRNA
in the A site moves to the P site, carrying the mRNA and
the deacylated tRNA with it. The ribosome may be
prepared for these rearrangements by the initial binding
of EF-G as well. The dissociation of EF-G leaves the
ribosome ready to accept the next aminoacyl-tRNA into
the A site. This group contains only bacterial members.
Length = 268
Score = 29.1 bits (66), Expect = 3.4
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 15/60 (25%)
Query: 159 ANEIREIMLERIIKQHLDTVDYDDHPRDFTDALLQYFREDEELSWDHIMFDLE-DFIGGH 217
E RE +LE + + D+ L++ + E+ EL+ + + L G
Sbjct: 194 VAEAREELLEAV-------AETDEE-------LMEKYLEEGELTEEELRAGLRRALRAGL 239
>gnl|CDD|237673 PRK14325, PRK14325, (dimethylallyl)adenosine tRNA
methylthiotransferase; Provisional.
Length = 444
Score = 29.3 bits (67), Expect = 3.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 183 HPRDFTDALLQYFREDEEL 201
HPRDFTD L++ + + +L
Sbjct: 240 HPRDFTDDLIEAYADLPKL 258
>gnl|CDD|151634 pfam11192, DUF2977, Protein of unknown function (DUF2977). This
family of proteins has no known function.
Length = 62
Score = 26.6 bits (59), Expect = 4.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 306 NNFDLNTSDLYWDEPTKFKPERFISQDGIVVKPSHFIP 343
N D++ +L D T+FKP +++ +G +V+ +++P
Sbjct: 22 NGIDVDEGNLPADFFTEFKPSKYLLYNGEIVENPNYVP 59
>gnl|CDD|227253 COG4916, COG4916, Uncharacterized protein containing a TIR
(Toll-Interleukin 1-resistance) domain [Function
unknown].
Length = 329
Score = 28.8 bits (64), Expect = 5.4
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 93 LLQSAFSNMFTQYLCSTRFDYEDKQLQTMVRNFDEIFYEINQGHPVDFLPWLNPFFSKHM 152
+ + + + +E+ L +N + EI Q D + F S+H
Sbjct: 20 YVDRVANLLREAGVTVFYDIFEEANLWG--KNLYDYLSEIYQ----DKALFTIMFISEHY 73
Query: 153 NKIAGWANEIREIMLERIIKQH 174
++ W N R+ M R ++H
Sbjct: 74 SR-KMWTNHERQAMQARAFQEH 94
>gnl|CDD|216021 pfam00611, FCH, Fes/CIP4, and EFC/F-BAR homology domain. Alignment
extended from. Highly alpha-helical. The cytosolic
endocytic adaptor proteins in fungi carry this domain at
the N-terminus; several of these have been referred to
as muniscin proteins. These N-terminal BAR, N-BAR, and
EFC/F-BAR domains are found in proteins that regulate
membrane trafficking events by inducing membrane
tubulation. The domain dimerises into a curved structure
that binds to liposomes and either senses or induces the
curvature of the membrane bilayer to cause biophysical
changes to the shape of the bilayer; it also thereby
recruits other trafficking factors, such as the GTPase
dynamin. Most EFC/F-BAR domain-family members localise
to actin-rich structures.
Length = 91
Score = 26.9 bits (60), Expect = 6.3
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 13/72 (18%)
Query: 150 KHMNKIAGWANEIREIM-------------LERIIKQHLDTVDYDDHPRDFTDALLQYFR 196
K + + E+ + + L ++ K++L + + A
Sbjct: 16 KRLKQGIKLLEELAKFLRERAEIEKEYAKKLRKLAKKYLKKKEGSSEYGSLSKAWDTLLS 75
Query: 197 EDEELSWDHIMF 208
E E+L+ H+
Sbjct: 76 ETEKLAKQHLKL 87
>gnl|CDD|239840 cd04375, RhoGAP_DLC1, RhoGAP_DLC1: RhoGAP (GTPase-activator protein
[GAP] for Rho-like small GTPases) domain of DLC1-like
proteins. DLC1 shows in vitro GAP activity towards RhoA
and CDC42. Beside its C-terminal GAP domain, DLC1 also
contains a SAM (sterile alpha motif) and a START
(StAR-related lipid transfer action) domain. DLC1 has
tumor suppressor activity in cell culture. Small GTPases
cluster into distinct families, and all act as molecular
switches, active in their GTP-bound form but inactive
when GDP-bound. The Rho family of GTPases activates
effectors involved in a wide variety of developmental
processes, including regulation of cytoskeleton
formation, cell proliferation and the JNK signaling
pathway. GTPases generally have a low intrinsic GTPase
hydrolytic activity but there are family-specific groups
of GAPs that enhance the rate of GTP hydrolysis by
several orders of magnitude.
Length = 220
Score = 28.2 bits (63), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 167 LERIIKQHLDTVDYDD-HPRDFTDALLQYFRE 197
L +I+ D V+YD D D L QYFR+
Sbjct: 54 LRSMIESSTDNVNYDGQQAYDVADMLKQYFRD 85
>gnl|CDD|220053 pfam08876, DUF1836, Domain of unknown function (DUF1836). This
family of proteins are functionally uncharacterized.
Length = 102
Score = 27.2 bits (61), Expect = 6.4
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 223 LVMLILIYLMKNPHCIDKIRQEIDAVTGGLRDVCMDDK 260
L +LILI +K+ +D I++ + + + D + +
Sbjct: 59 LALLILISDLKSVLSLDDIKKLLTLLFNNINDDLISPE 96
>gnl|CDD|222201 pfam13529, Peptidase_C39_2, Peptidase_C39 like family.
Length = 136
Score = 27.7 bits (62), Expect = 6.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 112 DYEDKQLQTMVRNFDEIFYEINQGHPV 138
Y K +FDEI E++ G PV
Sbjct: 73 KYGLKATDLTGTSFDEIKKELDAGRPV 99
>gnl|CDD|223556 COG0480, FusA, Translation elongation factors (GTPases)
[Translation, ribosomal structure and biogenesis].
Length = 697
Score = 28.4 bits (64), Expect = 8.4
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 10 NSFELIKEILIVQGSLFGGPLALCDWSSLQEKRRRIARKYCSP---RIISSNYQLMSKIS 66
FE + +++ ++ FG A +W + + IA + + + +LM K
Sbjct: 171 EEFEGVIDLVEMKAVAFGDG-AKYEWIEIPADLKEIAEEAREKLLEALAEFDEELMEKYL 229
Query: 67 L---IETPILLKAIHKRILSGNKSVKIKPLLQSAFSNMFTQYLCSTRFDY 113
+ KA+ K ++G + L SAF N Q L DY
Sbjct: 230 EGEEPTEEEIKKALRKGTIAGKI---VPVLCGSAFKNKGVQPLLDAVVDY 276
>gnl|CDD|226678 COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase
involved in regulation of bacterial surface properties,
and related proteins [General function prediction only].
Length = 357
Score = 28.1 bits (63), Expect = 9.4
Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 22/101 (21%)
Query: 111 FDYEDKQLQTMVRNFDE----IFYEINQGHPVDFL---PWLNPFFSKHMNKIAGWANEIR 163
FD Q + + ++Y H D PW N + A WA
Sbjct: 157 FDEALYQFSLHEKYLRDPETGLYY-----HGWDEDGTMPWANNE----SGEPAFWARGNG 207
Query: 164 EI------MLERIIKQHLDTVDYDDHPRDFTDALLQYFRED 198
+LE + + H D + + RD DAL++Y E
Sbjct: 208 WYAMALADLLELLPEDHPDRRELLNVLRDLVDALIRYQDES 248
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA. This
domain is found mainly hydrophobic tRNA synthetases. The
domain binds to the anticodon of the tRNA.
Length = 148
Score = 27.4 bits (61), Expect = 9.4
Identities = 9/44 (20%), Positives = 14/44 (31%)
Query: 245 IDAVTGGLRDVCMDDKYKMPYTEALVFETLRICASPIVPHVATE 288
++ L D V ETL +P +P + E
Sbjct: 44 LELSKDRLYGEAPDSDRSAQTVLYEVLETLLRLLAPFMPFITEE 87
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.324 0.140 0.430
Gapped
Lambda K H
0.267 0.0709 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,528,621
Number of extensions: 2156398
Number of successful extensions: 2472
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2405
Number of HSP's successfully gapped: 49
Length of query: 405
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 306
Effective length of database: 6,546,556
Effective search space: 2003246136
Effective search space used: 2003246136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (26.9 bits)