Your job contains 1 sequence.
>psy14859
MASNPKRDTSDPQPEAKRLCHLEEKTEKIERCLAQLVQAITARKSSTLDQSPAVSDPGMA
SGVSDQSPPLSSAPANPVQASAPVQAAHQPSATVQAAPGSSASVLAAPLPSSSGQPFISP
PAQSAAFLAQPASTASLPPSAAHHLYPLPFFCDPSYYGHYLQSAMKASRGQVAQPPPPSE
SVTPIPLSPVSSDQEDFSEEDEVVDCNPPALFSFAPSTKEREPSIPDPDSELASQGVVCQ
KLGSPAWNRVRYTESQRALQAGGVFQPLAIPSEFPHSNSSTGENLVRQELFLGTLTHGLL
LQRRAFSSTMNTLVEKYPEVREELGSLFSDESVFKNVSDHLLQYVCGKRAECLESRRRLV
EPRDPHLASLLLRARRGKKSSSPQNLEPPGRVSLKVQTLQKPQRCSSPVNPPADSRIGAE
LVGGRLRRFVDAWIRLGAPAPLVRIVSGYAIPFSAKPPLVPLCSLQHLATPVSSAMSLHI
QEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLINHFRIPS
FLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSN
WVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSPAPV
LQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFASFVIPMG
RLHSRRIQRQASLLRLGAPHLTPINPAVLPKLEWWLNALPLSSPIFPRQVQHFISTDASD
LGWGSQVDSSFLSGLWSREQQNWHINKKEMFAVHQALSLNLPLLQSSVVMVQSDNQTVVS
YLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAYNSVADSLSRSKSLPDWHLSR
SATEQIFLKWGVPCIDLFASRVSAVVPNHFQVSRHVAILLLLSSGRRVHDLTLLSLDPDH
FQELDDFVVFWPVFGSKTDSSSHLQSGWKIKENSSDPLFCIPTWIRHLSTLSQRRMGSRP
LTSLFITTRGIVQPASRSVIAGWVKTALRGANIIASPGSMRSAVATFRYNSDLPLDSILR
QGNWRGGQNFFNYKNMG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14859
(1097 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0291223 - symbol:DDB_G0291223_RTE "DIRS1 O... 297 4.6e-25 1
DICTYBASE|DDB_G0267304 - symbol:DDB_G0267304_RTE "DIRS1 O... 325 6.2e-25 2
DICTYBASE|DDB_G0267210 - symbol:DDB_G0267210_RTE "DIRS1 O... 307 5.1e-24 3
DICTYBASE|DDB_G0294180 - symbol:DDB_G0294180_RTE "DIRS1 O... 287 9.1e-22 1
DICTYBASE|DDB_G0294346 - symbol:DDB_G0294346_RTE "DIRS1 O... 266 1.7e-19 1
DICTYBASE|DDB_G0267338 - symbol:DDB_G0267338_RTE "DIRS1 O... 216 2.1e-16 1
DICTYBASE|DDB_G0267326 - symbol:DDB_G0267326_RTE "DIRS1 O... 188 7.9e-13 2
DICTYBASE|DDB_G0267240 - symbol:DDB_G0267240_RTE "DIRS1 O... 197 9.3e-13 2
POMBASE|SPAC167.08 - symbol:Tf2-2 "retrotransposable elem... 210 9.6e-13 1
POMBASE|SPAC26A3.13c - symbol:Tf2-4 "retrotransposable el... 210 9.6e-13 1
POMBASE|SPAC27E2.08 - symbol:Tf2-6 "retrotransposable ele... 210 9.6e-13 1
POMBASE|SPAC2E1P3.03c - symbol:Tf2-3 "retrotransposable e... 210 9.6e-13 1
POMBASE|SPAC9.04 - symbol:Tf2-1 "retrotransposable elemen... 210 9.6e-13 1
POMBASE|SPAPB15E9.03c - symbol:Tf2-5 "retrotransposable e... 210 9.6e-13 1
POMBASE|SPCC1020.14 - symbol:Tf2-12 "retrotransposable el... 210 9.6e-13 1
POMBASE|SPAC13D1.01c - symbol:Tf2-7 "retrotransposable el... 197 2.4e-11 1
POMBASE|SPAC19D5.09c - symbol:Tf2-8 "retrotransposable el... 197 2.4e-11 1
POMBASE|SPBC1289.17 - symbol:Tf2-11 "retrotransposable el... 197 2.4e-11 1
DICTYBASE|DDB_G0267342 - symbol:DDB_G0267342_RTE "DIRS1 O... 181 1.7e-10 4
DICTYBASE|DDB_G0294338 - symbol:DDB_G0294338_RTE "DGLT-A"... 108 4.0e-05 2
ASPGD|ASPL0000032122 - symbol:AN5470 species:162425 "Emer... 134 5.0e-05 1
DICTYBASE|DDB_G0267314 - symbol:DDB_G0267314_RTE "DIRS1 O... 126 0.00012 1
ASPGD|ASPL0000036582 - symbol:AN2670 species:162425 "Emer... 134 0.00016 1
SGD|S000003537 - symbol:YIL082W-A "Retrotransposon TYA Ga... 147 0.00024 2
SGD|S000007347 - symbol:YGR109W-B "Retrotransposon TYA Ga... 146 0.00032 2
ASPGD|ASPL0000026373 - symbol:AN10649 species:162425 "Eme... 129 0.00056 1
>DICTYBASE|DDB_G0291223 [details] [associations]
symbol:DDB_G0291223_RTE "DIRS1 ORF2/ORF3 fusion
fragment" species:44689 "Dictyostelium discoideum" [GO:0006278
"RNA-dependent DNA replication" evidence=IEA] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
PROSITE:PS50878 dictyBase:DDB_G0291223 GO:GO:0003723 GO:GO:0003964
GO:GO:0006278 eggNOG:COG2801 EMBL:AAFI02000176 RefSeq:XP_635338.1
ProteinModelPortal:Q54EZ5 EnsemblProtists:DDB0219661 GeneID:8628043
KEGG:ddi:DDB_G0291223 InParanoid:Q54EZ5 OMA:WINSPSA Uniprot:Q54EZ5
Length = 300
Score = 297 (109.6 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 79/257 (30%), Positives = 133/257 (51%)
Query: 435 RLGAPAPLVR----IVSGYAIPFSAKPPLVPLCSLQHLATPVSSAMSLHIQEMLETGVLK 490
R+G+ L R I S A F A +P+ S+ P S ++ +Q++L ++
Sbjct: 41 RIGSSKLLSRGCKWINSPSASKFQADAKPIPI-SIPE--GPKSDCITKEVQDLLLDDAIE 97
Query: 491 RL----DSTTGFLSRLFLVPK-GNGGTRPVLNLKGLNQFLSPKKFSLINHFRIPSFLQKG 545
++ S F S +F+VPK G RPVL+LK LN +++ + F + +PS +++G
Sbjct: 98 QVLPNRYSKRVFYSNVFMVPKPGTNLHRPVLDLKRLNSYINNQSFKMEGIKNLPSMVKQG 157
Query: 546 DYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSNWVASL 605
YM+ +D+ +AY HV + ++ + G +PFGL+TAP+ F L V +
Sbjct: 158 YYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTMLLRPVLRM 217
Query: 606 LRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSPAPVLQFLG 665
LR + V+ YLDD L+V K A+ +L LG+ +NL+KS L P + FLG
Sbjct: 218 LRDINVSVIAYLDDLLIVGSTKEECLSNLKKAMDLLVKLGFKLNLEKSVLEPTQSITFLG 277
Query: 666 IMWDPHLDRMWLPEDKQ 682
+ D ++ +P++K+
Sbjct: 278 LQIDSVSMKLLVPKEKK 294
>DICTYBASE|DDB_G0267304 [details] [associations]
symbol:DDB_G0267304_RTE "DIRS1 ORF3 fragment"
species:44689 "Dictyostelium discoideum" [GO:0015074 "DNA
integration" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0004523 "ribonuclease H activity" evidence=IEA]
[GO:0003964 "RNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000477 InterPro:IPR002104 InterPro:IPR002156
InterPro:IPR011010 InterPro:IPR013762 Pfam:PF00075 Pfam:PF00078
Pfam:PF00589 PROSITE:PS50878 dictyBase:DDB_G0267304 GO:GO:0003677
GO:GO:0003723 GO:GO:0006310 GO:GO:0003964 GO:GO:0006278
GO:GO:0004523 GO:GO:0015074 Gene3D:1.10.443.10 SUPFAM:SSF56349
InterPro:IPR010998 SUPFAM:SSF47823 Gene3D:1.10.150.130
InterPro:IPR023109 EMBL:AAFI02000001 RefSeq:XP_647713.1
ProteinModelPortal:Q55H05 EnsemblProtists:DDB0216498 GeneID:8615835
KEGG:ddi:DDB_G0267304 OMA:PIRRESP Uniprot:Q55H05
Length = 833
Score = 325 (119.5 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 98/367 (26%), Positives = 170/367 (46%)
Query: 538 IPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFAS 597
+PS +++G YM+ +D+ +AY +V + ++ + G +PFGL+TAP+ F
Sbjct: 7 LPSMVKQGYYMVKLDIKKAYLYVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTM 66
Query: 598 LSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSP 657
L V +LR + V+ YLDD L+V K + +L LG+ +NL+KS L
Sbjct: 67 LLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLEKSVLEL 126
Query: 658 APVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFASFVI 717
+ FLG+ ++ +P++K+ ++ +R L + L G L
Sbjct: 127 TQSITFLGLQIGSISMKLLVPKEKKKSVIKEIRNFLKLDCCSPRKLAGLKGKLVALKDAF 186
Query: 718 PMGRLHSRRIQRQASLLRLGA-PHLTPINPAVLPKLEWWLNALPLSS----PIFPRQVQH 772
+ + + Q L G PI V ++ WL L + +FP +
Sbjct: 187 RLSTRRTNKFHSQCLTLANGDWDQSFPIPQDVKSEISHWLTVLNQWNGKEISLFP-SYDY 245
Query: 773 FISTDASDLGWGSQVDSS-----FLSGLWSREQQNWHINKKEMFAVHQALSLNLPLLQSS 827
++TDAS+ G G+ + S WS Q N N++EM A+ A L +
Sbjct: 246 VLTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCQKLNNC 305
Query: 828 VVMVQSDNQTVVSYLRRQGGT-KSLSLLSEVEKIFLLSQDWRIHILAQFIPGAYNSVADS 886
+ +Q+DN T +SY+ RQGG + LS+L E+++ +++++ + IPG +N A
Sbjct: 306 KLKIQTDNTTTLSYINRQGGQIQDLSVL--FEQLWKQCLKKKVNLIGEHIPGFFNVKAPQ 363
Query: 887 LS-RSKS 892
S R +S
Sbjct: 364 PSFREES 370
Score = 46 (21.3 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 1059 SMRSAVATFRYNSDLPLDSILRQGNWR 1085
S RS++A+ ++++P + + G W+
Sbjct: 766 STRSSMASLLLSNNVPFHVVKKMGRWK 792
>DICTYBASE|DDB_G0267210 [details] [associations]
symbol:DDB_G0267210_RTE "DIRS1 ORF2 fragment"
species:44689 "Dictyostelium discoideum" [GO:0015074 "DNA
integration" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR002104
InterPro:IPR011010 InterPro:IPR013762 Pfam:PF00078 Pfam:PF00589
PROSITE:PS50878 dictyBase:DDB_G0267210 GO:GO:0003677 GO:GO:0003723
GO:GO:0006310 GO:GO:0003964 GO:GO:0006278 GO:GO:0015074
Gene3D:1.10.443.10 SUPFAM:SSF56349 InterPro:IPR010998
SUPFAM:SSF47823 Gene3D:1.10.150.130 InterPro:IPR023109
EMBL:AAFI02000001 ProtClustDB:CLSZ2431571 RefSeq:XP_647766.1
ProteinModelPortal:Q55H48 EnsemblProtists:DDB0216453 GeneID:8615792
KEGG:ddi:DDB_G0267210 Uniprot:Q55H48
Length = 968
Score = 307 (113.1 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 80/272 (29%), Positives = 138/272 (50%)
Query: 471 PVSSAMSLHIQEMLETGVLKRL----DSTTGFLSRLFLVPK-GNGGTRPVLNLKGLNQFL 525
P S ++ +Q++L ++++ S F S +F VPK G RPVL+LK LN ++
Sbjct: 92 PKSDCITKEVQDLLLDDAIEQVLPNRYSKRVFYSNVFTVPKPGTTLHRPVLDLKRLNTYI 151
Query: 526 SPKKFSLINHFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLP 585
+ + F + +PS +++G YM+ +D+ +AY HV + ++ + G +P
Sbjct: 152 NNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKAMP 211
Query: 586 FGLATAPQAFASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLG 645
FGL+TAP+ F L V +LR + V+ YLDD L+V K + +L LG
Sbjct: 212 FGLSTAPRIFTMLLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLG 271
Query: 646 WIVNLQKSSLSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARS 705
+ +NL+K L P ++ FLG+ D ++ +P++K+ + +R L +
Sbjct: 272 FKLNLEKIVLEPTQLITFLGLQIDSVSMKLLVPKEKKKGVIKEIRNFLKLDCCSPRKLAG 331
Query: 706 LLGYL-SFASFVIPMGRLHSRRIQRQASLLRL 736
L G L + VIP RL++RR + S+ +L
Sbjct: 332 LKGKLIALKDAVIPF-RLYTRRTNKNQSVSKL 362
Score = 68 (29.0 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 1005 IRHLSTLSQRRMGSR-PLT--SLFITTRGIVQPASRSVIAGWVKTALR--GANIIASPG- 1058
+RHL+T + G R P + S+FI G +P + I V + L G +I+
Sbjct: 855 VRHLATYLRASKGRRKPHSGDSVFIKNEG--EPLQVNDINSIVLSTLSKSGIDIVKFKSH 912
Query: 1059 SMRSAVATFRYNSDLPLDSILRQGNWRGGQN---FFNYKNMG 1097
S RSA+A+ +++ P + + G W+ F++ + +G
Sbjct: 913 STRSAMASLLLSNNAPFHVVKKLGRWKSNDTVDTFYDKRIIG 954
Score = 37 (18.1 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 872 LAQFIPGAYNSVADSLSRSKSLPD--WHLSRSATEQIFLKWG-VP-CIDLFASRV 922
L QF G YN+ +L S + D S S++ + G +P ID SRV
Sbjct: 572 LIQFEEGFYNTDLPNLEISNLVSDDSSSSSSSSSSHVSSSTGNIPRSIDQTISRV 626
Score = 37 (18.1 bits), Expect = 7.9e-21, Sum P(3) = 7.9e-21
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 934 RHVAILLLLSSGRR 947
RH+A L S GRR
Sbjct: 856 RHLATYLRASKGRR 869
>DICTYBASE|DDB_G0294180 [details] [associations]
symbol:DDB_G0294180_RTE "DIRS1 ORF1/ORF3 fusion
fragment" species:44689 "Dictyostelium discoideum" [GO:0006278
"RNA-dependent DNA replication" evidence=IEA] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
PROSITE:PS50878 dictyBase:DDB_G0294180 GO:GO:0003723 GO:GO:0003964
GO:GO:0006278 ProtClustDB:CLSZ2846537 EMBL:AAFI02000230
RefSeq:XP_628809.1 EnsemblProtists:DDB0215083 GeneID:3385473
KEGG:ddi:DDB_G0294180 InParanoid:Q54AV5 Uniprot:Q54AV5
Length = 558
Score = 287 (106.1 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 83/285 (29%), Positives = 133/285 (46%)
Query: 378 KKSSSPQNLEPPGRVSLKVQTLQKPQRCSSPVNPPADSRIGAELVGGRLRRFVDAWIRLG 437
KKS + G S + R ++ P + + VGGRL W LG
Sbjct: 276 KKSVNSSGNNTTGNSSNSKSSSGSNGRSNNFNGSPKEQEVNLP-VGGRLFHHKQVWKELG 334
Query: 438 APAPLVRIVSGYAIPF--SAKPPLVPLCSLQHLATPVSSAMSLHIQEMLETGVLKRL--- 492
P V+G I + KP L P+ + P S ++ +Q++L ++++
Sbjct: 335 LPNFCQEFVNGLKIHLLPNFKPMLNPI-PISIPEGPKSDCITKEVQDLLLDDAIEQVLPN 393
Query: 493 -DSTTGFLSRLFLVPK-GNGGTRPVLNLKGLNQFLSPKKFSLINHFRIPSFLQKGDYMIS 550
S F S +F VPK G RPVL+LK LN +++ + F + +PS +++G YM+
Sbjct: 394 RYSKRVFYSNVFTVPKPGTNLHRPVLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVK 453
Query: 551 IDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRG 610
+D+ +AY HV + ++ + G +PFGL+TAP+ F L V +LR
Sbjct: 454 LDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTMLLRPVLRMLRDIK 513
Query: 611 MRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSL 655
+ V+ YLDD L+V K + +L LG+ +NL+KS L
Sbjct: 514 VSVIAYLDDLLIVGSTKEECLSNFKKTMELLVKLGFKLNLEKSVL 558
>DICTYBASE|DDB_G0294346 [details] [associations]
symbol:DDB_G0294346_RTE "DIRS1 ORF1/ORF3 fusion
fragment" species:44689 "Dictyostelium discoideum" [GO:0006278
"RNA-dependent DNA replication" evidence=IEA] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
PROSITE:PS50878 dictyBase:DDB_G0294346 GO:GO:0003723 GO:GO:0003964
GO:GO:0006278 EMBL:AAFI02000253 RefSeq:XP_628722.1
EnsemblProtists:DDB0220064 GeneID:3385386 KEGG:ddi:DDB_G0294346
InParanoid:Q54AM3 ProtClustDB:CLSZ2846537 Uniprot:Q54AM3
Length = 541
Score = 266 (98.7 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 67/211 (31%), Positives = 109/211 (51%)
Query: 422 VGGRLRRFVDAWIRLGAPAPLVRIVSG---YAIP-FSAKPPLVPLCSLQHLATPVSSAMS 477
VGGRL W LG P +V+G + +P F P +P+ S+ P S ++
Sbjct: 299 VGGRLFHHKQVWKELGLPNFCQEVVNGLKIHLLPNFKPMPNPIPI-SIPE--GPKSDCIT 355
Query: 478 LHIQEMLETGVLKRL----DSTTGFLSRLFLVPK-GNGGTRPVLNLKGLNQFLSPKKFSL 532
+Q++L ++++ S F S +F VPK G RPVL+LK LN +++ + F +
Sbjct: 356 KEVQDLLLDDAIEQVLPNRYSKRVFYSNVFTVPKPGTNLHRPVLDLKRLNTYINNQSFKM 415
Query: 533 INHFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAP 592
+PS +++G YM+ +D+ +AY HV + ++ + G +PFGL+TAP
Sbjct: 416 EGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAP 475
Query: 593 QAFASLSNWVASLLRSRGMRVVVYLDDFLLV 623
+ F L V +LR + V+ YLDD L+V
Sbjct: 476 RIFTMLLRHVLRMLRDINVSVIAYLDDLLIV 506
>DICTYBASE|DDB_G0267338 [details] [associations]
symbol:DDB_G0267338_RTE "DIRS1 ORF3" species:44689
"Dictyostelium discoideum" [GO:0006278 "RNA-dependent DNA
replication" evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000477 Pfam:PF00078 PROSITE:PS50878
dictyBase:DDB_G0267338 GO:GO:0003723 GO:GO:0003964 GO:GO:0006278
eggNOG:COG2801 EMBL:AAFI02000001 RefSeq:XP_647698.1
ProteinModelPortal:Q55GY9 EnsemblProtists:DDB0202373 GeneID:8615850
KEGG:ddi:DDB_G0267338 OMA:CHTEALM Uniprot:Q55GY9
Length = 161
Score = 216 (81.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 538 IPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFAS 597
+PS +++G YM+ +D+ +AY HV + ++ + G +PFGL+TAP+ F
Sbjct: 7 LPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTM 66
Query: 598 LSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSP 657
L V +LR + V+ YLDD L+V K + +L LG+ +NL+K L P
Sbjct: 67 LLRHVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLEKIVLEP 126
Query: 658 APVLQFLGIMWDPHLDRMWLPEDKQ 682
+ FLG+ D ++ +P++K+
Sbjct: 127 TQSITFLGLQIDSKSMKLLVPKEKK 151
>DICTYBASE|DDB_G0267326 [details] [associations]
symbol:DDB_G0267326_RTE "DIRS1 ORF2 fragment"
species:44689 "Dictyostelium discoideum" [GO:0015074 "DNA
integration" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR002104
InterPro:IPR011010 InterPro:IPR013762 Pfam:PF00078 Pfam:PF00589
PROSITE:PS50878 dictyBase:DDB_G0267326 GO:GO:0003677 GO:GO:0003723
GO:GO:0006310 GO:GO:0003964 GO:GO:0006278 GO:GO:0015074
Gene3D:1.10.443.10 SUPFAM:SSF56349 InterPro:IPR010998
SUPFAM:SSF47823 Gene3D:1.10.150.130 InterPro:IPR023109
EMBL:AAFI02000001 ProtClustDB:CLSZ2431571 RefSeq:XP_647724.1
ProteinModelPortal:Q55GZ4 EnsemblProtists:DDB0216509 GeneID:8615846
KEGG:ddi:DDB_G0267326 Uniprot:Q55GZ4
Length = 818
Score = 188 (71.2 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 538 IPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFAS 597
+PS +++G YM+ +D+ +AY HV + ++ + G +PFGL+TAP+ F
Sbjct: 7 LPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTM 66
Query: 598 LSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSP 657
L +LR + V+ YLDD L+V K +++L LG+ +NL+KS L P
Sbjct: 67 LLRPALRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMNLLVKLGFKLNLEKSVLEP 126
Query: 658 APVLQFL 664
+ L
Sbjct: 127 TQSITLL 133
Score = 72 (30.4 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 1005 IRHLSTLSQRRMGSR-PLT--SLFITTRGIVQPASRSVIAGWVKTALR--GANIIASPG- 1058
+RHL+T + G R P + S+FI G +P + I V + L G +I+
Sbjct: 705 VRHLATYLRASKGRRKPHSGDSVFIKNEG--EPLQVNDINSIVLSTLSKSGIDIVKFKSH 762
Query: 1059 SMRSAVATFRYNSDLPLDSILRQGNWRGGQN---FFNYKNMG 1097
S RSA+A+ ++++P + + G W+ F++ + +G
Sbjct: 763 STRSAMASLLLSNNVPFHVVKKMGRWKSNDTVDTFYDKRIIG 804
Score = 37 (18.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 934 RHVAILLLLSSGRR 947
RH+A L S GRR
Sbjct: 706 RHLATYLRASKGRR 719
>DICTYBASE|DDB_G0267240 [details] [associations]
symbol:DDB_G0267240_RTE "DIRS1 ORF2 fragment"
species:44689 "Dictyostelium discoideum" [GO:0015074 "DNA
integration" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR002104
InterPro:IPR011010 InterPro:IPR013762 Pfam:PF00078 Pfam:PF00589
PROSITE:PS50878 dictyBase:DDB_G0267240 GO:GO:0003677 GO:GO:0003723
GO:GO:0006310 GO:GO:0003964 GO:GO:0006278 GO:GO:0015074
Gene3D:1.10.443.10 SUPFAM:SSF56349 InterPro:IPR010998
SUPFAM:SSF47823 Gene3D:1.10.150.130 InterPro:IPR023109
EMBL:AAFI02000001 ProtClustDB:CLSZ2431571 RefSeq:XP_647781.1
ProteinModelPortal:Q55H37 EnsemblProtists:DDB0216468 GeneID:8615807
KEGG:ddi:DDB_G0267240 Uniprot:Q55H37
Length = 818
Score = 197 (74.4 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Query: 538 IPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFAS 597
+PS +++G YM+ +D+ +AY HV + ++ + G +PFGL+TAP+ F
Sbjct: 7 LPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIFTM 66
Query: 598 LSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSP 657
L V +LR + V+ YLDD L+V K + +L LG+ +NL+KS L P
Sbjct: 67 LLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLEKSVLEP 126
Query: 658 APVLQFL 664
+ FL
Sbjct: 127 TQSITFL 133
Score = 62 (26.9 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 1005 IRHLSTLSQRRMGSR-PLT--SLFITTRGIVQPASRSVIAGWVKTALRGANIIASP---G 1058
+RHL+T + G R P + S+FI G + + I V + L + I S
Sbjct: 705 VRHLATYLRASKGRRKPHSGDSVFIKNEG--ESLQVNDINSIVLSTLSKSGIDISKFKSH 762
Query: 1059 SMRSAVATFRYNSDLPLDSILRQGNWRGGQN---FFNYKNMG 1097
S RSA+A+ ++++P + + G W+ F++ + +G
Sbjct: 763 STRSAMASLLLSNNVPFHVVKKMGRWKSNDTVDTFYDKRIIG 804
Score = 37 (18.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 934 RHVAILLLLSSGRR 947
RH+A L S GRR
Sbjct: 706 RHLATYLRASKGRR 719
>POMBASE|SPAC167.08 [details] [associations]
symbol:Tf2-2 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC26A3.13c [details] [associations]
symbol:Tf2-4 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004190 "aspartic-type endopeptidase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015074
"DNA integration" evidence=IEA] InterPro:IPR000477
InterPro:IPR001584 InterPro:IPR001969 InterPro:IPR012337
Pfam:PF00078 Pfam:PF00665 PROSITE:PS00141 PROSITE:PS50878
PROSITE:PS50994 PomBase:SPBC9B6.02c PomBase:SPAC167.08
PomBase:SPAC26A3.13c PomBase:SPAC9.04 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0033554 EMBL:CU329672
GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC27E2.08 [details] [associations]
symbol:Tf2-6 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC2E1P3.03c [details] [associations]
symbol:Tf2-3 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC9.04 [details] [associations]
symbol:Tf2-1 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0033554 "cellular response to stress"
evidence=IEP] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAPB15E9.03c [details] [associations]
symbol:Tf2-5 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPCC1020.14 [details] [associations]
symbol:Tf2-12 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC9B6.02c
PomBase:SPAC167.08 PomBase:SPAC26A3.13c PomBase:SPAC9.04
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0033554
EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671 GO:GO:0006508
GenomeReviews:CU329671_GR GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 GO:GO:0004190 GO:GO:0015074 KO:K07497
EMBL:L10324 PIR:T38401 RefSeq:NP_001018800.2 RefSeq:NP_593347.1
RefSeq:NP_593385.2 RefSeq:NP_594156.1 ProteinModelPortal:Q05654
MEROPS:A02.051 EnsemblFungi:SPAC167.08.1
EnsemblFungi:SPAC26A3.13c.1 EnsemblFungi:SPAC9.04.1
EnsemblFungi:SPBC9B6.02c.1 GeneID:2542672 GeneID:2542797
GeneID:2543673 GeneID:3361218 KEGG:spo:SPAC167.08
KEGG:spo:SPAC26A3.13c KEGG:spo:SPAC9.04 KEGG:spo:SPBC9B6.02c
HOGENOM:HOG000154219 OMA:FHTEVET OrthoDB:EOG44N213 NextBio:20803720
InterPro:IPR024648 Pfam:PF12382 Uniprot:Q05654
Length = 1333
Score = 210 (79.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 96/429 (22%), Positives = 188/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++TAP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + L ++ VV Y+DD L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTI--LGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC13D1.01c [details] [associations]
symbol:Tf2-7 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004190 "aspartic-type endopeptidase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015074
"DNA integration" evidence=IEA] InterPro:IPR000477
InterPro:IPR001584 InterPro:IPR001969 InterPro:IPR012337
Pfam:PF00078 Pfam:PF00665 PROSITE:PS00141 PROSITE:PS50878
PROSITE:PS50994 PomBase:SPAC13D1.01c PomBase:SPAC19D5.09c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006508 GO:GO:0003723
SUPFAM:SSF53098 GO:GO:0003964 GO:GO:0006278 GO:GO:0004190
GO:GO:0015074 HOGENOM:HOG000154219 OrthoDB:EOG44N213
InterPro:IPR024648 Pfam:PF12382 RefSeq:NP_594897.1
RefSeq:NP_594898.2 ProteinModelPortal:Q9C0R2
EnsemblFungi:SPAC13D1.01c.1 EnsemblFungi:SPAC19D5.09c.1
GeneID:2542763 GeneID:2542903 KEGG:spo:SPAC13D1.01c
KEGG:spo:SPAC19D5.09c NextBio:20803808 Uniprot:Q9C0R2
Length = 1333
Score = 197 (74.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 93/429 (21%), Positives = 186/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++ AP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + ++ VV Y+D+ L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTILGEVKES--HVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPAC19D5.09c [details] [associations]
symbol:Tf2-8 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003964
"RNA-directed DNA polymerase activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994
PomBase:SPAC13D1.01c PomBase:SPAC19D5.09c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006508 GO:GO:0003723
SUPFAM:SSF53098 GO:GO:0003964 GO:GO:0006278 GO:GO:0004190
GO:GO:0015074 HOGENOM:HOG000154219 OrthoDB:EOG44N213
InterPro:IPR024648 Pfam:PF12382 RefSeq:NP_594897.1
RefSeq:NP_594898.2 ProteinModelPortal:Q9C0R2
EnsemblFungi:SPAC13D1.01c.1 EnsemblFungi:SPAC19D5.09c.1
GeneID:2542763 GeneID:2542903 KEGG:spo:SPAC13D1.01c
KEGG:spo:SPAC19D5.09c NextBio:20803808 Uniprot:Q9C0R2
Length = 1333
Score = 197 (74.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 93/429 (21%), Positives = 186/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++ AP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + ++ VV Y+D+ L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTILGEVKES--HVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>POMBASE|SPBC1289.17 [details] [associations]
symbol:Tf2-11 "retrotransposable element/transposon
Tf2-type" species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004190 "aspartic-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0015074 "DNA
integration" evidence=IEA] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001969 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS00141 PROSITE:PS50878 PROSITE:PS50994 PomBase:SPBC1289.17
GO:GO:0005634 EMBL:CU329671 GO:GO:0006508 GenomeReviews:CU329671_GR
GO:GO:0003723 SUPFAM:SSF53098 GO:GO:0003964 GO:GO:0006278
GO:GO:0004190 GO:GO:0015074 eggNOG:COG2801 KO:K07497
HOGENOM:HOG000154219 OrthoDB:EOG44N213 InterPro:IPR024648
Pfam:PF12382 RefSeq:NP_596839.1 ProteinModelPortal:Q9UR07
EnsemblFungi:SPBC1289.17.1 GeneID:2540036 KEGG:spo:SPBC1289.17
NextBio:20801177 Uniprot:Q9UR07
Length = 1333
Score = 197 (74.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 93/429 (21%), Positives = 186/429 (43%)
Query: 475 AMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLIN 534
AM+ I + L++G+++ + + VPK G R V++ K LN+++ P + L
Sbjct: 427 AMNDEINQGLKSGIIRESKAINA--CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 484
Query: 535 HFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQA 594
++ + +Q +DL AY + ++ + LA V +P+G++ AP
Sbjct: 485 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAH 544
Query: 595 FASLSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSS 654
F N + ++ VV Y+D+ L+ ++ K + L + I+N K
Sbjct: 545 FQYFINTILGEVKES--HVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602
Query: 655 LSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFAS 714
+ V +F+G H+ ++ NI + L + N R LG +++
Sbjct: 603 FHQSQV-KFIGY----HISEKGFTPCQE----NIDKVLQWKQPKNRKELRQFLGSVNYLR 653
Query: 715 FVIPMGRLHSRRIQRQASLLRLGAP-HLTPINPAVLPKLEWWLNALPLSSPI-FPRQVQH 772
IP S+ +LL+ TP + ++ L + P+ F +++
Sbjct: 654 KFIPKT---SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKI-- 708
Query: 773 FISTDASDLGWGSQVDSS----------FLSGLWSREQQNWHINKKEMFAVHQALSLNLP 822
+ TDASD+ G+ + + S S+ Q N+ ++ KEM A+ ++L
Sbjct: 709 LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768
Query: 823 LLQSSV--VMVQSDNQTVVSYLRRQGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAY 880
L+S++ + +D++ ++ + + ++ L ++FL QD+ I + PG+
Sbjct: 769 YLESTIEPFKILTDHRNLIGRITNESEPENKRLARW--QLFL--QDFNFEI--NYRPGSA 822
Query: 881 NSVADSLSR 889
N +AD+LSR
Sbjct: 823 NHIADALSR 831
>DICTYBASE|DDB_G0267342 [details] [associations]
symbol:DDB_G0267342_RTE "DIRS1 ORF2 fragment"
species:44689 "Dictyostelium discoideum" [GO:0015074 "DNA
integration" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR002104
InterPro:IPR011010 InterPro:IPR013762 Pfam:PF00078 Pfam:PF00589
PROSITE:PS50878 dictyBase:DDB_G0267342 GO:GO:0003677 GO:GO:0003723
GO:GO:0006310 GO:GO:0003964 GO:GO:0006278 GO:GO:0015074
Gene3D:1.10.443.10 SUPFAM:SSF56349 InterPro:IPR010998
SUPFAM:SSF47823 Gene3D:1.10.150.130 InterPro:IPR023109
EMBL:AAFI02000001 RefSeq:XP_647701.1 ProteinModelPortal:Q55GY6
EnsemblProtists:DDB0216513 GeneID:8615853 KEGG:ddi:DDB_G0267342
ProtClustDB:CLSZ2431571 Uniprot:Q55GY6
Length = 925
Score = 181 (68.8 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 40/127 (31%), Positives = 65/127 (51%)
Query: 538 IPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFAS 597
+PS +++G YM+ +D+ +AY HV + ++ + G +PFGL+TA + F
Sbjct: 114 LPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAHRIFTM 173
Query: 598 LSNWVASLLRSRGMRVVVYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSP 657
L V +LR + V+ YLDD L+V K + +L LG+ +NL+KS L P
Sbjct: 174 LLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLIKLGFKLNLEKSVLEP 233
Query: 658 APVLQFL 664
+ L
Sbjct: 234 TQSITLL 240
Score = 69 (29.3 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 1005 IRHLSTLSQRRMGSRPLTS---LFITTRGIVQPASRSVIAGWVKTALR--GANIIASPG- 1058
+RHL+T + G R S +FI G +P + I V + L G +I+
Sbjct: 812 VRHLATYLRASKGRRKPHSGDPVFIKNEG--EPLQVNDINSIVLSTLSKSGIDIVKFKSH 869
Query: 1059 SMRSAVATFRYNSDLPLDSILRQGNWRGGQ---NFFNYKNMG 1097
S RSA+A+ ++++P + + G W+ +F++ + +G
Sbjct: 870 STRSAMASLLLSNNVPFHVVKKMGRWKSNDTVDSFYDKRIIG 911
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 17/75 (22%), Positives = 31/75 (41%)
Query: 350 AECLESRRRLVEPRDPHLASLLLRARRGKKSSSPQNLEP-PGRVSLKVQTLQKPQRCSSP 408
AE + R + +E + +L+ R + SS N P + + Q S+
Sbjct: 21 AESFDLRIKSMEDQINNLSLAFTRFMKEPIFSSNSNSRSQPSHDNSDTENEQSEDESSNN 80
Query: 409 VNPPADSRIGAELVG 423
V+ P D ++ L+G
Sbjct: 81 VDVPTDYQLSDTLLG 95
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 872 LAQFIPGAYNSVADSLSRSKSLPD--WHLSRSATEQIFLKWG-VP-CIDLFASRV 922
L QF G YN+ +L S + D S S++ + G +P ID SRV
Sbjct: 529 LIQFEEGFYNTDLPNLEISNLVSDDSSSSSSSSSSHVSSSTGNIPRSIDQTISRV 583
Score = 37 (18.1 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 934 RHVAILLLLSSGRR 947
RH+A L S GRR
Sbjct: 813 RHLATYLRASKGRR 826
>DICTYBASE|DDB_G0294338 [details] [associations]
symbol:DDB_G0294338_RTE "DGLT-A" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006278 "RNA-dependent DNA replication"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR001878
Pfam:PF00078 Pfam:PF00098 PROSITE:PS50158 PROSITE:PS50878
SMART:SM00343 dictyBase:DDB_G0294338 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0003964 GO:GO:0006278 Gene3D:4.10.60.10
InterPro:IPR005162 Pfam:PF03732 EMBL:AAFI02000250
RefSeq:XP_628729.1 ProteinModelPortal:Q54AM7
EnsemblProtists:DDB0215166 GeneID:3385393 KEGG:ddi:DDB_G0294338
InParanoid:Q54AM7 Uniprot:Q54AM7
Length = 693
Score = 108 (43.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 479 HIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLINHFRI 538
HI+E+L+ +++ +S S + L PK +G R +N LN ++ + + I
Sbjct: 306 HIKELLKYKIIRESNSQVS--SSVVLRPKPDGSMRMCINYTKLNNITVKDRYPIPDINEI 363
Query: 539 PSFLQKGDYMIS-IDLSQAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAF 595
+ + KG ++ S +D+ Y+ + I+ + A S + +PFGL AP F
Sbjct: 364 WNQI-KGSHVYSKLDMISGYYQIRIREGDKYLTAFSVPQGLFEFNVMPFGLCNAPAVF 420
Score = 78 (32.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 741 LTPINPAVLPKLEWWLNALPLSSPIFPRQVQHF-ISTDASDLGWGSQV--DSSFLSGLWS 797
L P+ + PK L L + + F R+ + F + TDASD+G G+ + D +S +S
Sbjct: 502 LDPLMKLLDPKNVKELQRL-IGTLNFFRKFKPFKLETDASDIGVGATLCQDHGIIS-FYS 559
Query: 798 RE----QQNWHINKKEMFAVHQALSLNLPLLQSSVVMVQSDNQTVVSYLRRQ-GGTKSLS 852
R ++N+ ++KE +V AL ++ + +V +DN + VS+LR G ++
Sbjct: 560 RTIRDTEKNYSASEKECLSVVCALEEFHYIIGTQETLVVTDN-SAVSFLRNDLGKIRNKR 618
Query: 853 LLSEVEKIFLLSQDWRIHILAQFIPGAYNSVADSLS 888
++ K L S + I ++ G N+ AD+LS
Sbjct: 619 FINWNVK--LASYN----ITFKYRSGKENTFADALS 648
>ASPGD|ASPL0000032122 [details] [associations]
symbol:AN5470 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006278
"RNA-dependent DNA replication" evidence=IEA] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
PROSITE:PS50878 GO:GO:0003723 EMBL:BN001305 GO:GO:0003964
GO:GO:0006278 EMBL:AACD01000094 OrthoDB:EOG44N213
HOGENOM:HOG000137563 RefSeq:XP_663074.1 ProteinModelPortal:Q5B1W0
EnsemblFungi:CADANIAT00003618 GeneID:2871760 KEGG:ani:AN5470.2
OMA:ATHHEYL Uniprot:Q5B1W0
Length = 608
Score = 134 (52.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 104/472 (22%), Positives = 182/472 (38%)
Query: 454 SAKPPLVPLCSLQHLATPVSSAMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTR 513
S K P VP L ++ + + E+L+ G + R+ + LF V K GG R
Sbjct: 79 SGKDPEVPWGPLYNMTQEELIVLRKTLSELLQKGFI-RVSHSPAAAPVLF-VRKPGGGLR 136
Query: 514 PVLNLKGLNQFLSPKKFSL-INHFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLAL 572
++ + LN ++ L + H + Q + +D+S A+ + I + A
Sbjct: 137 FCVDYRALNAITKKDRYPLPLIHETLNQIGQ-ARWFTKLDVSAAFHKIRIAKGQEWMTAF 195
Query: 573 SYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVVVYLDDFLL-VNQDPRILE 631
+ PFGLA AP F NW +L Y+DD L+ N D R
Sbjct: 196 RTRYGLFEWLVTPFGLANAPSTFQKYINW--TLREYLDEFCSAYIDDVLVYTNGDLRQHR 253
Query: 632 IQGKLAVSILGSLGWIVNLQKSSLSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRT 691
++ + L G ++++K ++LG + + K + +
Sbjct: 254 KHVRMVLKKLEEAGLYLDIKKCEFE-CKETKYLGFI---------IQAGKGIKMDP--EK 301
Query: 692 LLASKTWNLDSA-RSLLGYLSFASFVIPMGRLHSRRIQRQASLLRLGAPHL-TPINPAVL 749
+ A K W + + + G+L FA+F S ++ +L + G P L T
Sbjct: 302 VKAIKEWETPTTIKGVRGFLGFANFYRRFIPNFSGIVRPLNNLTKKGTPFLWTKECQDSF 361
Query: 750 PKLEWWLNALPLSSPIFPRQVQHFISTDASDLGWG---SQVDS-------SFLSGLWSRE 799
L+ P+ + P + + TD+S G SQ + ++ S S
Sbjct: 362 DLLKEKFITGPVLATFNP-SYRTVVETDSSGYNTGGVLSQYNEKGELHPCAYFSKRNSPA 420
Query: 800 QQNWHINKKEMFAVHQALSL-NLPLLQSSVVMVQSDNQTVVSYLRRQGGTKSLSLLSEVE 858
+ N+ I KE+ A+ + L + L V +D++ + + + T+ V
Sbjct: 421 ECNYEIYDKELLAIVRCLEAWDAELRSCGEFQVITDHKNLEYFFSPRKLTER-----HVR 475
Query: 859 KIFLLSQDWRIHILAQFIPGAYNSVADSLSR-SKSLPDWHLSR--SATEQIF 907
LS R + + G+ N AD+LSR + +PD R S T Q+F
Sbjct: 476 WSLFLS---RFNFKLVYRKGSANQRADALSRRDQDMPDDEDDRVKSRTMQLF 524
>DICTYBASE|DDB_G0267314 [details] [associations]
symbol:DDB_G0267314_RTE "DIRS1 ORF2/ORF3 fusion
fragment" species:44689 "Dictyostelium discoideum" [GO:0006278
"RNA-dependent DNA replication" evidence=IEA] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
dictyBase:DDB_G0267314 GO:GO:0003723 GO:GO:0003964 GO:GO:0006278
EMBL:AAFI02000001 RefSeq:XP_647718.1 ProteinModelPortal:Q55H00
EnsemblProtists:DDB0216503 GeneID:8615840 KEGG:ddi:DDB_G0267314
ProtClustDB:CLSZ2429590 Uniprot:Q55H00
Length = 316
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 555 QAYFHVPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVV 614
++ HV + ++ + G + FGL+TAP+ F L V +LR + V+
Sbjct: 205 ESLLHVLVDPQYRDLFRFLWKGSHYRWKTMSFGLSTAPRIFTMLLRPVLRMLRDIKVSVI 264
Query: 615 VYLDDFLLVNQDPRILEIQGKLAVSILGSLGWIVNLQKSSLSPAPVLQFL 664
YLDD L+V K + +L LG+ +NL+KS L P ++ L
Sbjct: 265 AYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLEKSVLEPTQSIKNL 314
>ASPGD|ASPL0000036582 [details] [associations]
symbol:AN2670 species:162425 "Emericella nidulans"
[GO:0006278 "RNA-dependent DNA replication" evidence=IEA]
[GO:0003964 "RNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0015074 "DNA integration"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000477 InterPro:IPR000953 InterPro:IPR001584
InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665 PROSITE:PS50013
PROSITE:PS50878 PROSITE:PS50994 SMART:SM00298 Pfam:PF00385
GO:GO:0005634 EMBL:BN001306 GO:GO:0003723 SUPFAM:SSF53098
GO:GO:0003964 GO:GO:0006278 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0015074 InterPro:IPR023780 HOGENOM:HOG000137554
ProteinModelPortal:C8VKE8 EnsemblFungi:CADANIAT00010444 OMA:CLRANAY
Uniprot:C8VKE8
Length = 1530
Score = 134 (52.2 bits), Expect = 0.00016, P = 0.00016
Identities = 104/472 (22%), Positives = 182/472 (38%)
Query: 454 SAKPPLVPLCSLQHLATPVSSAMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTR 513
S K P VP L ++ + + E+L+ G + R+ + LF V K GG R
Sbjct: 527 SGKDPEVPWGPLYNMTQEELIVLRKTLSELLQKGFI-RVSHSPAAAPVLF-VRKPGGGLR 584
Query: 514 PVLNLKGLNQFLSPKKFSL-INHFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLAL 572
++ + LN ++ L + H + Q + +D+S A+ + I + A
Sbjct: 585 FCVDYRALNAITKKDRYPLPLIHETLNQIGQ-ARWFTKLDVSAAFHKIRIAKGQEWMTAF 643
Query: 573 SYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVVVYLDDFLL-VNQDPRILE 631
+ PFGLA AP F NW +L Y+DD L+ N D R
Sbjct: 644 RTRYGLFEWLVTPFGLANAPSTFQKYINW--TLREYLDEFCSAYIDDVLVYTNGDLRQHR 701
Query: 632 IQGKLAVSILGSLGWIVNLQKSSLSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRT 691
++ + L G ++++K ++LG + + K + +
Sbjct: 702 KHVRMVLKKLEEAGLYLDIKKCEFE-CKETKYLGFI---------IQAGKGIKMDP--EK 749
Query: 692 LLASKTWNLDSA-RSLLGYLSFASFVIPMGRLHSRRIQRQASLLRLGAPHL-TPINPAVL 749
+ A K W + + + G+L FA+F S ++ +L + G P L T
Sbjct: 750 VKAIKEWETPTTIKGVRGFLGFANFYRRFIPNFSGIVRPLNNLTKKGTPFLWTKECQDSF 809
Query: 750 PKLEWWLNALPLSSPIFPRQVQHFISTDASDLGWG---SQVDS-------SFLSGLWSRE 799
L+ P+ + P + + TD+S G SQ + ++ S S
Sbjct: 810 DLLKEKFITGPVLATFNP-SYRTVVETDSSGYNTGGVLSQYNEKGELHPCAYFSKRNSPA 868
Query: 800 QQNWHINKKEMFAVHQALSL-NLPLLQSSVVMVQSDNQTVVSYLRRQGGTKSLSLLSEVE 858
+ N+ I KE+ A+ + L + L V +D++ + + + T+ V
Sbjct: 869 ECNYEIYDKELLAIVRCLEAWDAELRSCGEFQVITDHKNLEYFFSPRKLTER-----HVR 923
Query: 859 KIFLLSQDWRIHILAQFIPGAYNSVADSLSR-SKSLPDWHLSR--SATEQIF 907
LS R + + G+ N AD+LSR + +PD R S T Q+F
Sbjct: 924 WSLFLS---RFNFKLVYRKGSANQRADALSRRDQDMPDDEDDRVKSRTMQLF 972
>SGD|S000003537 [details] [associations]
symbol:YIL082W-A "Retrotransposon TYA Gag and TYB Pol genes"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003964 "RNA-directed DNA polymerase activity"
evidence=IEA;ISS] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA;ISS] [GO:0032197 "transposition,
RNA-mediated" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0015074 "DNA integration" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0046797 "viral
procapsid maturation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006278 "RNA-dependent DNA replication" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000943
"retrotransposon nucleocapsid" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=IEA;ISS] [GO:0004523 "ribonuclease H activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000477
InterPro:IPR001584 InterPro:IPR001878 InterPro:IPR012337
Pfam:PF00078 Pfam:PF00665 PROSITE:PS50158 PROSITE:PS50878
PROSITE:PS50994 SMART:SM00343 SGD:S000003537 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006942
GO:GO:0008270 GO:GO:0006508 GO:GO:0003723 GO:GO:0006310
SUPFAM:SSF53098 GO:GO:0008233 GO:GO:0003964 GO:GO:0006278
EMBL:Z46728 EMBL:Z37997 GO:GO:0004540 GO:GO:0004190
InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004523 GO:GO:0015074
GO:GO:0003887 GO:GO:0032197 KO:K07497 InterPro:IPR005162
Pfam:PF03732 GO:GO:0046797 OrthoDB:EOG44N213 GO:GO:0000943
HOGENOM:HOG000172599 InterPro:IPR024650 Pfam:PF12384 EMBL:M23367
PIR:S53577 RefSeq:NP_012184.1 ProteinModelPortal:Q7LHG5 SMR:Q7LHG5
IntAct:Q7LHG5 MINT:MINT-541560 STRING:Q7LHG5 GeneID:854728
KEGG:sce:YIL082W-A NextBio:977418 Genevestigator:Q7LHG5
Uniprot:Q7LHG5
Length = 1498
Score = 147 (56.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 94/406 (23%), Positives = 171/406 (42%)
Query: 500 SRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLINHFRIPSFLQKGDYMISIDLSQAYFH 559
S + LVPK +G R ++ + LN+ F L + S + ++DL Y
Sbjct: 660 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQ 719
Query: 560 VPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVV-VYLD 618
+P++ + A T +PFGL AP FA ++A R +R V VYLD
Sbjct: 720 IPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFA---RYMADTFRD--LRFVNVYLD 774
Query: 619 DFLLVNQDPRILEIQGKLAVSILGSL---GWIVNLQKSSLSPAPVLQFLGIMWDPHLDRM 675
D L+ ++ P E K ++L L IV +K + +FLG + + ++
Sbjct: 775 DILIFSESP---EEHWKHLDTVLERLKNENLIVKKKKCKFASEET-EFLG--YSIGIQKI 828
Query: 676 WLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFASFVIPMGRLHSRRIQRQASLLR 735
P + +R KT + A+ LG +++ IP + +I + L
Sbjct: 829 -APLQHKCAA---IRDFPTPKT--VKQAQRFLGMINYYRRFIP----NCSKIAQPIQLFI 878
Query: 736 LGAPHLTPINPAVLPKLEWWLNALPLSSPIFPRQVQHFISTDASDLGWGS---QVDSSF- 791
T + KL+ L P+ P F + + ++TDAS G G+ +VD+
Sbjct: 879 CDKSQWTEKQDKAIEKLKAALCNSPVLVP-FNNKANYRLTTDASKDGIGAVLEEVDNKNK 937
Query: 792 ---LSGLWSRE----QQNWHINKKEMFAVHQALSLNLPLLQSSVVMVQSDNQTVVSYLRR 844
+ G +S+ Q+N+ + E+ + +AL +L +++D+ +++S +
Sbjct: 938 LVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNK 997
Query: 845 QGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAYNSVADSLSRS 890
+ + + L + D+ + LA G N VAD++SR+
Sbjct: 998 NEPARRVQRWLDD----LATYDFTLEYLA----GPKNVVADAISRA 1035
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 5 PKRDTSDPQPEAKRLCHLE--EKTEKIERCLAQLVQAITARKSSTLDQSPAVS 55
P + + +P A RL L+ TEK E+ + ++VQ + K +SP S
Sbjct: 609 PVKHDIEIKPGA-RLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSS 660
>SGD|S000007347 [details] [associations]
symbol:YGR109W-B "Retrotransposon TYA Gag and TYB Pol genes"
species:4932 "Saccharomyces cerevisiae" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;ISS] [GO:0003964
"RNA-directed DNA polymerase activity" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0006278 "RNA-dependent DNA
replication" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015074 "DNA integration" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004190 "aspartic-type endopeptidase
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA;ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0046797 "viral procapsid maturation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0090305 "nucleic acid
phosphodiester bond hydrolysis" evidence=IEA] [GO:0032197
"transposition, RNA-mediated" evidence=ISS] [GO:0004540
"ribonuclease activity" evidence=ISS] [GO:0000943 "retrotransposon
nucleocapsid" evidence=ISS] InterPro:IPR000477 InterPro:IPR001584
InterPro:IPR001878 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS50158 PROSITE:PS50878 PROSITE:PS50994 SMART:SM00343
SGD:S000007347 GO:GO:0005524 GO:GO:0005737 EMBL:BK006941
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006508
GO:GO:0003723 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008233
GO:GO:0003964 GO:GO:0006278 GO:GO:0004540 GO:GO:0004190
InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004523 GO:GO:0015074
EMBL:Z72894 GO:GO:0003887 EMBL:Z72895 GO:GO:0032197 eggNOG:COG2801
KO:K07497 InterPro:IPR005162 Pfam:PF03732 GO:GO:0046797
OrthoDB:EOG44N213 GO:GO:0000943 EMBL:M34549 EMBL:M18353 PIR:S22875
PIR:S69842 RefSeq:NP_011624.1 ProteinModelPortal:Q99315 SMR:Q99315
STRING:Q99315 MEROPS:A02.022 GeneID:853006 KEGG:sce:YGR109W-B
HOGENOM:HOG000172599 NextBio:972857 PMAP-CutDB:Q99315
Genevestigator:Q99315 InterPro:IPR024650 Pfam:PF12384
Uniprot:Q99315
Length = 1547
Score = 146 (56.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 94/406 (23%), Positives = 171/406 (42%)
Query: 500 SRLFLVPKGNGGTRPVLNLKGLNQFLSPKKFSLINHFRIPSFLQKGDYMISIDLSQAYFH 559
S + LVPK +G R ++ + LN+ F L + S + ++DL Y
Sbjct: 634 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQ 693
Query: 560 VPIKTTHQRFLALSYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVV-VYLD 618
+P++ + A T +PFGL AP FA ++A R +R V VYLD
Sbjct: 694 IPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFA---RYMADTFRD--LRFVNVYLD 748
Query: 619 DFLLVNQDPRILEIQGKLAVSILGSL---GWIVNLQKSSLSPAPVLQFLGIMWDPHLDRM 675
D L+ ++ P E K ++L L IV +K + +FLG + + ++
Sbjct: 749 DILIFSESP---EEHWKHLDTVLERLKNENLIVKKKKCKFASEET-EFLG--YSIGIQKI 802
Query: 676 WLPEDKQLTLGNILRTLLASKTWNLDSARSLLGYLSFASFVIPMGRLHSRRIQRQASLLR 735
P + +R KT + A+ LG +++ IP + +I + L
Sbjct: 803 -APLQHKCAA---IRDFPTPKT--VKQAQRFLGMINYYRRFIP----NCSKIAQPIQLFI 852
Query: 736 LGAPHLTPINPAVLPKLEWWLNALPLSSPIFPRQVQHFISTDASDLGWGS---QVDSSF- 791
T + KL+ L P+ P F + + ++TDAS G G+ +VD+
Sbjct: 853 CDKSQWTEKQDKAIDKLKDALCNSPVLVP-FNNKANYRLTTDASKDGIGAVLEEVDNKNK 911
Query: 792 ---LSGLWSRE----QQNWHINKKEMFAVHQALSLNLPLLQSSVVMVQSDNQTVVSYLRR 844
+ G +S+ Q+N+ + E+ + +AL +L +++D+ +++S +
Sbjct: 912 LVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNK 971
Query: 845 QGGTKSLSLLSEVEKIFLLSQDWRIHILAQFIPGAYNSVADSLSRS 890
+ + + L + D+ + LA G N VAD++SR+
Sbjct: 972 NEPARRVQRWLDD----LATYDFTLEYLA----GPKNVVADAISRA 1009
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 5 PKRDTSDPQPEAKRLCHLE--EKTEKIERCLAQLVQAITARKSSTLDQSPAVS 55
P + + +P A RL L+ TEK E+ + ++VQ + K +SP S
Sbjct: 583 PVKHDIEIKPGA-RLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSS 634
>ASPGD|ASPL0000026373 [details] [associations]
symbol:AN10649 species:162425 "Emericella nidulans"
[GO:0006278 "RNA-dependent DNA replication" evidence=IEA]
[GO:0003964 "RNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0015074 "DNA integration"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000477 InterPro:IPR000953
InterPro:IPR001584 InterPro:IPR012337 Pfam:PF00078 Pfam:PF00665
PROSITE:PS50013 PROSITE:PS50878 PROSITE:PS50994 SMART:SM00298
Pfam:PF00385 GO:GO:0005634 GO:GO:0003723 EMBL:BN001305
SUPFAM:SSF53098 GO:GO:0003964 GO:GO:0006278 InterPro:IPR016197
SUPFAM:SSF54160 GO:GO:0015074 InterPro:IPR023780
ProteinModelPortal:C8VFC1 EnsemblFungi:CADANIAT00003243 OMA:ERIACSA
Uniprot:C8VFC1
Length = 1562
Score = 129 (50.5 bits), Expect = 0.00056, P = 0.00056
Identities = 103/472 (21%), Positives = 181/472 (38%)
Query: 454 SAKPPLVPLCSLQHLATPVSSAMSLHIQEMLETGVLKRLDSTTGFLSRLFLVPKGNGGTR 513
S K P VP L ++ + + E+L+ G + R+ + LF V K GG R
Sbjct: 502 SGKDPEVPWGPLYNMTQEELIVLRKTLSELLQKGFI-RVSHSPAAAPVLF-VRKPGGGLR 559
Query: 514 PVLNLKGLNQFLSPKKFSL-INHFRIPSFLQKGDYMISIDLSQAYFHVPIKTTHQRFLAL 572
++ + LN ++ L + H + Q + +D+S A+ + I + A
Sbjct: 560 FCVDYRALNAITKKDRYPLPLIHETLNQIGQ-ARWFTKLDVSAAFHKIRIAKGQEWMTAF 618
Query: 573 SYNGDVLAMTCLPFGLATAPQAFASLSNWVASLLRSRGMRVVVYLDDFLL-VNQDPRILE 631
+ PFGLA AP F NW +L Y+DD L+ N D R
Sbjct: 619 RTRYGLFEWLVTPFGLANAPSTFQKYINW--TLREYLDEFCSAYIDDVLVYTNGDLRQHR 676
Query: 632 IQGKLAVSILGSLGWIVNLQKSSLSPAPVLQFLGIMWDPHLDRMWLPEDKQLTLGNILRT 691
++ + L G ++++K ++LG + + K + +
Sbjct: 677 KHVRMVLKKLEEAGLYLDIKKCEFE-CKETKYLGFI---------IQAGKGIKMDP--EK 724
Query: 692 LLASKTWNLDSA-RSLLGYLSFASFVIPMGRLHSRRIQRQASLLRLGAPHL-TPINPAVL 749
+ A K W + + + G+L FA+F S ++ +L + G P L T
Sbjct: 725 VKAIKEWETPTTIKGVRGFLGFANFYRRFIPNFSGIVRPLNNLTKKGTPFLWTKECQDSF 784
Query: 750 PKLEWWLNALPLSSPIFPRQVQHFISTDASDLGWG---SQVDS-------SFLSGLWSRE 799
L+ P+ + P + + TD+S G SQ + ++ S S
Sbjct: 785 DLLKEKFITGPVLATFNP-SYRTVVETDSSGYNTGGVLSQYNEKGELHPCAYFSKRNSPA 843
Query: 800 QQNWHINKKEMFAVHQALSL-NLPLLQSSVVMVQSDNQTVVSYLRRQGGTKSLSLLSEVE 858
+ N+ I KE+ A+ + L + L V +D++ + + + T+ V
Sbjct: 844 ECNYEIYDKELLAIVRCLEAWDAELRSCGEFQVITDHKNLEYFFSPRKLTER-----HVR 898
Query: 859 KIFLLSQDWRIHILAQFIPGAYNSVADSLSR-SKSLPDWHLSR--SATEQIF 907
LS R + + G+ N AD+L R + +PD R S T Q+F
Sbjct: 899 WSLFLS---RFNFKLVYRKGSANQRADALHRRDQDMPDDEDDRVKSRTMQLF 947
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1097 1024 0.00080 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 634 (67 KB)
Total size of DFA: 470 KB (2218 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 87.73u 0.10s 87.83t Elapsed: 00:01:11
Total cpu time: 87.74u 0.10s 87.84t Elapsed: 00:01:12
Start: Thu Aug 15 14:01:06 2013 End: Thu Aug 15 14:02:18 2013