RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14862
(263 letters)
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 78.5 bits (192), Expect = 1e-17
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 77 NQFKDFVREYERQYDSDSEIERRFDIFRNNLKTIDYYTKHEQGTATYGVNRFADMTDSEF 136
F+++ + + + Y + + E F ++K + +N +D++ EF
Sbjct: 3 KTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGG--------AINHLSDLSLDEF 54
Query: 137 -NHGLSSLDWEQIENLKSTFETYSFNSSNSYGLAESINYKDKGKVLPKVQDQHLCGSCWA 195
N L S + + + + S + I+ + V P ++ Q CGS WA
Sbjct: 55 KNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTP-IRMQGGCGSAWA 113
Query: 196 HSAVACLESAYAIKHNELIELSKQP 220
S VA ESAY ++ ++L++Q
Sbjct: 114 FSGVAATESAYLAYRDQSLDLAEQE 138
Score = 25.8 bits (55), Expect = 6.2
Identities = 8/21 (38%), Positives = 8/21 (38%)
Query: 240 CSKGPYSLNHAVLNVGYDNES 260
G HAV VGY N
Sbjct: 238 RDNGYQPNYHAVNIVGYSNAQ 258
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 74.3 bits (181), Expect = 4e-16
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 69 LEEFLDHGNQFKDFVREYERQYDSDSEIERRFDIFRNNLKTIDYY-TKHEQGTATY--GV 125
+ L+ Q+ + + R Y + E R ++ N+K I+ + ++ +G ++ +
Sbjct: 4 FDHSLEA--QWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAM 60
Query: 126 NRFADMTDSEFNHGLSSLDWEQIENLKSTFETYSFNSSNSYGLAESINYKDKGKVLPKVQ 185
N F DMT EF ++ + K F Y S+++++KG V P V+
Sbjct: 61 NAFGDMTSEEFRQVMNGFQNRKPRKGK------VFQEPLFYEAPRSVDWREKGYVTP-VK 113
Query: 186 DQHLCGSCWAHSAVACLESAYAIKHNELIELSKQP 220
+Q CGSCWA SA LE K LI LS+Q
Sbjct: 114 NQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQN 148
Score = 27.3 bits (59), Expect = 1.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 237 HMLCSKGPYSLNHAVLNVGYDNESTR 262
+ ++H VL VGY EST
Sbjct: 247 YFEPDCSSEDMDHGVLVVGYGFESTE 272
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 64.6 bits (156), Expect = 4e-13
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRF 227
S++++ KG + V++Q CGSCW S LESA AI +++ L++Q +
Sbjct: 9 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQN 68
Query: 228 YKGGVMNLPHMLCSKGPYSLNHAV 251
+ + N +
Sbjct: 69 FNNHGCQGGLPSQAFEYIRYNKGI 92
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 60.7 bits (146), Expect = 9e-12
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 170 ESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPK---THGR 226
+++ KG V V+DQ +CGSCWA S +E + + L+ LS+Q +
Sbjct: 3 PEWDWRSKGAVTK-VKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDK 61
Query: 227 FYKGGVMNLPHMLCSK 242
GG+ + +
Sbjct: 62 ACMGGLPSNAYSAIKN 77
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 60.8 bits (146), Expect = 1e-11
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQ 219
L E+++++ KG V P V+ Q CGSCWA SAVA +E I+ +L+ELS+Q
Sbjct: 1 LPENVDWRKKGAVTP-VRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQ 51
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 60.4 bits (145), Expect = 1e-11
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 170 ESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRFYK 229
+SI+++ KG V P V++Q CGSCWA S +A +E I L+ELS+Q +
Sbjct: 3 QSIDWRAKGAVTP-VKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSY 61
Query: 230 GGVMNLPHMLC 240
G
Sbjct: 62 GCKGGYQTTSL 72
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 59.7 bits (143), Expect = 2e-11
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRF 227
+ E ++++ KG V P V++Q CGSCWA SAV +E I+ L E S+Q R
Sbjct: 1 IPEYVDWRQKGAVTP-VKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR 59
Query: 228 YKGGVMNLPHMLC 240
G P
Sbjct: 60 SYGCNGGYPWSAL 72
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 60.3 bits (145), Expect = 2e-11
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 170 ESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQ 219
+ +++ V P V+DQ CGSCWA S++ +ES YAI+ N+LI LS+Q
Sbjct: 20 AAYDWRLHSGVTP-VKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQ 68
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 59.6 bits (143), Expect = 2e-11
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRF 227
L +SI++++ G V+P V++Q CGSCWA S VA +E I +LI LS+Q
Sbjct: 1 LPDSIDWRENGAVVP-VKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA 59
Query: 228 YKG 230
G
Sbjct: 60 NHG 62
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 59.2 bits (142), Expect = 3e-11
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 170 ESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQP 220
+S++Y+ KG V P V++Q CGSCWA S+V LE K +L+ LS Q
Sbjct: 3 DSVDYRKKGYVTP-VKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQN 52
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 58.8 bits (141), Expect = 3e-11
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQ 219
L E I+++ KG V P V++Q CGSCWA S V+ +ES I+ LI LS+Q
Sbjct: 1 LPEQIDWRKKGAVTP-VKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQ 51
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 58.5 bits (140), Expect = 5e-11
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELS 217
L +S+++++KG V V+ Q CG+CWA SAV LE+ +K +L+ LS
Sbjct: 1 LPDSVDWREKGCVTE-VKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLS 49
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 58.5 bits (140), Expect = 6e-11
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRF 227
L +S++++ KG V P V++Q CGSCWA SA LE K +L+ LS+Q R
Sbjct: 1 LPKSVDWRKKGYVTP-VKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP 59
Query: 228 YKGGVMNLPHMLCSKGPYSLNHAV 251
N M + N +
Sbjct: 60 QGNQGCNGGFMARAFQYVKENGGL 83
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 58.1 bits (139), Expect = 7e-11
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQPPKTHGRF 227
L ++++ G V+ ++ Q CG CWA SA+A +E I LI LS+Q GR
Sbjct: 1 LPSYVDWRSAGAVVD-IKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRT 59
Query: 228 YKGGVMN 234
N
Sbjct: 60 QNTRGCN 66
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 57.7 bits (138), Expect = 1e-10
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQ 219
L ++++ KG V +++Q CGSCWA SAVA +ES I+ +LI LS+Q
Sbjct: 1 LPSFVDWRSKGAVNS-IKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQ 51
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 56.9 bits (136), Expect = 2e-10
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 168 LAESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNELIELSKQP-----PK 222
+ S++++ KG V V+DQ CGSCWA S + +E IK N+L+ LS+Q
Sbjct: 2 VPASVDWRKKGAVTS-VKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD 60
Query: 223 THGRFYKGGVMNLPHMLCSKGPYSLNHAVLNVGYDN 258
+ G + + +G + YD
Sbjct: 61 QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDG 96
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 54.6 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 170 ESINYKDKGKVLPKVQDQHLCGSCWAHSAVACLESAYAIKHNE 212
+++++ +G V V+DQ CGSCWA SA+ +E + + +
Sbjct: 3 AAVDWRARGAVTA-VKDQGQCGSCWAFSAIGNVECQWFLAGHP 44
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 53.4 bits (127), Expect = 5e-09
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 168 LAESINYKDKGKVLPK---VQDQHLCGSCWAHSAVACLESAYAIKHNELI--ELSKQPPK 222
L S + +++ P ++DQ CGSCWA AV + I N + E+S +
Sbjct: 2 LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLL 61
Query: 223 THGRFYKGGVMN 234
T G N
Sbjct: 62 TCCGSMCGDGCN 73
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 50.8 bits (120), Expect = 3e-08
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 168 LAESINYKDKGKV--LPKVQDQHLCGSCWAHSAVACLESAYAIKHN 211
L S ++++ + + V++Q CGSC++ +++ LE+ I N
Sbjct: 1 LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTN 46
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 45.4 bits (106), Expect = 2e-06
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 168 LAESINYKDKGKV--LPKVQDQHL---CGSCWAHSAVACLESAYAIKHNELIELSKQPPK 222
L +S ++++ V ++QH+ CGSCWAH++ + + IK + +
Sbjct: 34 LPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQ 93
Query: 223 T-----HGRFYKGGVMNLPHMLCSKGPYSLNHAVLNVGYDN 258
+ +GG + D
Sbjct: 94 NVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQ 134
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga
maritima [TaxId: 2336]}
Length = 149
Score = 31.5 bits (71), Expect = 0.048
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 93 DSEIERRFDIFRNNLKTIDYYTKHEQGTATYGVN 126
++++RR D+ N ++T+ Y HE+ N
Sbjct: 16 QNQLQRRADLIPNLVETVKGYAAHEKEILEEIAN 49
>d2qtpa1 d.79.9.1 (A:3-171) Uncharacterized protein SPO0826
{Silicibacter pomeroyi [TaxId: 89184]}
Length = 169
Score = 28.1 bits (63), Expect = 0.77
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 12 GKASVRGLTFQYEAEWASGCVHTYLGWHPR 41
GK+++ G E E A+ +H LG R
Sbjct: 78 GKSAMVGE--NGELEHAAAILHPKLGAPLR 105
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 28.8 bits (64), Expect = 0.79
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 183 KVQDQHLCGSCWAHSAVACLESAYAIKHN-ELIELS 217
V +Q G W +A L + N + ELS
Sbjct: 68 PVTNQKSSGRAWLFAATNQLRLNVLSELNLKEFELS 103
>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,
phenylalanine-repressible {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 462
Score = 27.9 bits (62), Expect = 1.5
Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 2/73 (2%)
Query: 45 RVHNLILQRSQPNSYGSEEASTFDLEEFLDHGNQFKDFVREYERQYDSDSEIERRFDIFR 104
NL+ + ++ E + + D +
Sbjct: 178 AAMNLVRALTSSGLASLHLVHDWNREFV--RTSPAGARYEALATEIDRGLRFMSACGVAD 235
Query: 105 NNLKTIDYYTKHE 117
NL+T + Y HE
Sbjct: 236 RNLQTAEIYASHE 248
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 27.6 bits (61), Expect = 1.9
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 19/78 (24%)
Query: 141 SSLDWEQIENLKSTFETYSFNSSNSYGLAESINYKDKGKVLPKVQDQHLCGSCWAHSAVA 200
L ++ + F+ ++ + K + +Q G W S +
Sbjct: 38 ICLKRATVQRAQHVFQH-------------AVPQEGK-----PITNQKSSGRSWIFSCLN 79
Query: 201 CLESAYAIKHN-ELIELS 217
+ + K N E E S
Sbjct: 80 VMRLPFMKKLNIEEFEFS 97
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubc9 [TaxId: 9606]}
Length = 156
Score = 26.3 bits (57), Expect = 3.2
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 31 CVHTYLGWHPRWTGRVHNLILQRSQPNSYGSEEASTFDLEEFLDHGNQFKDFVREYERQY 90
+ W P T + L +Q + A + + +++ VR +++
Sbjct: 94 ILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKF 153
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.132 0.409
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,002,913
Number of extensions: 45429
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 157
Number of HSP's successfully gapped: 39
Length of query: 263
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 179
Effective length of database: 1,254,276
Effective search space: 224515404
Effective search space used: 224515404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.5 bits)