Query psy14865
Match_columns 98
No_of_seqs 94 out of 103
Neff 4.9
Searched_HMMs 13730
Date Fri Aug 16 22:47:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14865.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14865hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ji8a_ d.203.1.1 (A:) DsrC, t 47.8 7.2 0.00053 24.5 3.0 54 25-79 9-71 (111)
2 d2v4jc1 d.203.1.1 (C:3-105) Ds 36.4 23 0.0017 21.6 4.1 48 31-78 7-62 (103)
3 d1n5ua2 a.126.1.1 (A:197-388) 33.1 19 0.0014 23.7 3.4 36 42-77 125-160 (192)
4 d1n5ua1 a.126.1.1 (A:2-196) Se 31.1 20 0.0015 23.6 3.3 36 42-77 128-163 (195)
5 d1kxpd1 a.126.1.1 (D:17-214) V 27.2 24 0.0017 23.4 3.1 35 43-77 135-169 (198)
6 d1kxpd2 a.126.1.1 (D:215-404) 25.7 28 0.0021 22.7 3.3 45 31-77 113-157 (190)
7 d1kxpd3 a.126.1.1 (D:405-473) 23.3 45 0.0033 19.2 3.4 29 45-73 12-40 (69)
8 d1r7ma2 d.95.2.1 (A:121-225) D 23.3 22 0.0016 21.3 2.1 41 4-45 42-85 (105)
9 d1w96a1 b.84.2.1 (A:451-566) A 22.9 24 0.0018 21.7 2.3 49 12-70 67-115 (116)
10 d1tska_ g.3.7.2 (A:) Toxin ts 18.7 9.6 0.0007 19.2 -0.3 15 4-18 3-17 (35)
No 1
>d1ji8a_ d.203.1.1 (A:) DsrC, the gamma subunit of dissimilatory sulfite reductase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=47.83 E-value=7.2 Score=24.47 Aligned_cols=54 Identities=19% Similarity=0.263 Sum_probs=39.5
Q ss_pred ccCCCceeeeccceeecCChhHHHHHHhHHhhcc-C--CCCc------HHHHHHHHhccccCch
Q psy14865 25 FALPKFYLLFGVSLCIPANNTIFIKSISETLAKN-E--PHLT------LEFLEECISGFKQSTI 79 (98)
Q Consensus 25 F~L~k~~Ll~s~~l~vP~d~t~Fi~~IS~~LA~~-~--P~LT------l~Fl~e~~~g~~~~~~ 79 (98)
+.+++ +-+...+-.+..|..++...|.+.||+. + .+|| .+|+.+|+.-+..++.
T Consensus 9 ~~v~g-~~ie~D~~GfL~~~~dW~e~vA~~lA~~~eGi~~Lt~~Hw~vI~~lR~~y~~~~~~P~ 71 (111)
T d1ji8a_ 9 YQVDG-KKVILDEDCFMQNPEDWDEKVAEWLARELEGIQKMTEEHWKLVKYLREYWETFGTCPP 71 (111)
T ss_dssp EECSS-CEEEEEGGGEECCGGGCCHHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHTTTTSCCCC
T ss_pred EEECC-EEEEECCCCccCChhhcCHHHHHHHHHcccCccccCHHHHHHHHHHHHHHHHHCCCCc
Confidence 33443 3334444568899999999999999975 5 6799 5788888888776654
No 2
>d2v4jc1 d.203.1.1 (C:3-105) DsrC, the gamma subunit of dissimilatory sulfite reductase {Desulfovibrio vulgaris [TaxId: 881]}
Probab=36.35 E-value=23 Score=21.62 Aligned_cols=48 Identities=8% Similarity=-0.034 Sum_probs=37.1
Q ss_pred eeeeccceeecCChhHHHHHHhHHhhccC--CCCcH------HHHHHHHhccccCc
Q psy14865 31 YLLFGVSLCIPANNTIFIKSISETLAKNE--PHLTL------EFLEECISGFKQST 78 (98)
Q Consensus 31 ~Ll~s~~l~vP~d~t~Fi~~IS~~LA~~~--P~LTl------~Fl~e~~~g~~~~~ 78 (98)
+-+...+-.+-.|..++...|.+.||+.+ .+||- +|+.+|+.-+..++
T Consensus 7 ~~ie~D~~GyL~~~~dW~e~vA~~lA~~egI~eLt~~HW~vI~~lR~~y~~~~~~P 62 (103)
T d2v4jc1 7 KSFEVDEDGFLLRFDDWCPEWVEYVKESEGISDISPDHQKIIDFLQDYYKKNGIAP 62 (103)
T ss_dssp EEECBCTTSCBSCGGGCCHHHHHHHGGGGTCSSCCHHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEeECCCcccCCcccCCHHHHHHHHHHCCchhcCHHHHHHHHHHHHHHHHhCCCC
Confidence 34444555677788889999999999988 57994 78899998886664
No 3
>d1n5ua2 a.126.1.1 (A:197-388) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.06 E-value=19 Score=23.73 Aligned_cols=36 Identities=11% Similarity=0.282 Sum_probs=30.4
Q ss_pred CChhHHHHHHhHHhhccCCCCcHHHHHHHHhccccC
Q psy14865 42 ANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQS 77 (98)
Q Consensus 42 ~d~t~Fi~~IS~~LA~~~P~LTl~Fl~e~~~g~~~~ 77 (98)
.+...|..+.==.+++.+|+++.++|..+..+|++.
T Consensus 125 ~~~~~~~~~flye~srrhP~~~~~~ll~~~~~y~~~ 160 (192)
T d1n5ua2 125 EAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETT 160 (192)
T ss_dssp HSHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 345667777777789999999999999999999887
No 4
>d1n5ua1 a.126.1.1 (A:2-196) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.05 E-value=20 Score=23.59 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=28.5
Q ss_pred CChhHHHHHHhHHhhccCCCCcHHHHHHHHhccccC
Q psy14865 42 ANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQS 77 (98)
Q Consensus 42 ~d~t~Fi~~IS~~LA~~~P~LTl~Fl~e~~~g~~~~ 77 (98)
.+.-.|..+.==.+++.+|+++.+.|..+..+|++.
T Consensus 128 e~~~~~~~~fLye~srrhP~~~~~~ll~~a~~y~~~ 163 (195)
T d1n5ua1 128 DNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAA 163 (195)
T ss_dssp HCHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 345555555555678999999999999999999887
No 5
>d1kxpd1 a.126.1.1 (D:17-214) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.22 E-value=24 Score=23.38 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=27.3
Q ss_pred ChhHHHHHHhHHhhccCCCCcHHHHHHHHhccccC
Q psy14865 43 NNTIFIKSISETLAKNEPHLTLEFLEECISGFKQS 77 (98)
Q Consensus 43 d~t~Fi~~IS~~LA~~~P~LTl~Fl~e~~~g~~~~ 77 (98)
|.-.|..+.==.+|+.+|+++.+.|..+..+|++.
T Consensus 135 ~~~~~~~~flye~srrhP~~~~~~ll~~a~~y~~~ 169 (198)
T d1kxpd1 135 DPKEYANQFMWEYSTNYGQAPLSLLVSYTKSYLSM 169 (198)
T ss_dssp CHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 34444555555678889999999999999999887
No 6
>d1kxpd2 a.126.1.1 (D:215-404) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.74 E-value=28 Score=22.69 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=34.2
Q ss_pred eeeeccceeecCChhHHHHHHhHHhhccCCCCcHHHHHHHHhccccC
Q psy14865 31 YLLFGVSLCIPANNTIFIKSISETLAKNEPHLTLEFLEECISGFKQS 77 (98)
Q Consensus 31 ~Ll~s~~l~vP~d~t~Fi~~IS~~LA~~~P~LTl~Fl~e~~~g~~~~ 77 (98)
..-+...++- .+...|..+..-.+++.+| ++.++|..+..+|.+.
T Consensus 113 ~~~~~e~~C~-~~~~~~l~~flye~srrhp-~~~~~ll~~~~~y~~~ 157 (190)
T d1kxpd2 113 ELPTNKDVCD-PGNTKVMDKYTFELSRRTH-LPEVFLSKVLEPTLKS 157 (190)
T ss_dssp CCCCHHHHHS-SCCHHHHHHHHHHHHTTCC-SCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHh-hhHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHH
Confidence 3444555554 4556788888888899877 9999999999999875
No 7
>d1kxpd3 a.126.1.1 (D:405-473) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.28 E-value=45 Score=19.20 Aligned_cols=29 Identities=24% Similarity=0.295 Sum_probs=26.1
Q ss_pred hHHHHHHhHHhhccCCCCcHHHHHHHHhc
Q psy14865 45 TIFIKSISETLAKNEPHLTLEFLEECISG 73 (98)
Q Consensus 45 t~Fi~~IS~~LA~~~P~LTl~Fl~e~~~g 73 (98)
|.|-.+++++|....|..+..=|++-++.
T Consensus 12 te~kkkL~e~lr~k~P~as~~~l~~mVek 40 (69)
T d1kxpd3 12 TEYKKKLAERLKAKLPDATPKELAKLVNK 40 (69)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHH
Confidence 67899999999999999999999988753
No 8
>d1r7ma2 d.95.2.1 (A:121-225) DNA endonuclease I-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.26 E-value=22 Score=21.28 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=27.8
Q ss_pred cccccccchHHHHHHHHhhhhccCCCceeeeccc---eeecCChh
Q psy14865 4 LNVRCYRHEEAQRVLRLSLDEFALPKFYLLFGVS---LCIPANNT 45 (98)
Q Consensus 4 ~~~~~~~~~~ay~lL~~~~~~F~L~k~~Ll~s~~---l~vP~d~t 45 (98)
++..||-.||...|...+.+-|+|+-. +.-.++ +++++...
T Consensus 42 l~T~~Ft~~e~~~L~~~L~~kf~l~~~-i~~~~~~~~i~i~~~s~ 85 (105)
T d1r7ma2 42 LNTQSFTFEEVEYLVKGLRNKFQLNCY-VKINKNKPIIYIDSMSY 85 (105)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHCCCEE-EEEETTEEEEEECGGGH
T ss_pred EEeCCCCHHHHHHHHHHHHHHhCceEE-EEecCCeEEEEEehhHH
Confidence 677899888888888888889999721 222222 55666554
No 9
>d1w96a1 b.84.2.1 (A:451-566) Acetyl-CoA carboxylase, BC-C subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.87 E-value=24 Score=21.68 Aligned_cols=49 Identities=12% Similarity=0.260 Sum_probs=29.6
Q ss_pred hHHHHHHHHhhhhccCCCceeeeccceeecCChhHHHHHHhHHhhccCCCCcHHHHHHH
Q psy14865 12 EEAQRVLRLSLDEFALPKFYLLFGVSLCIPANNTIFIKSISETLAKNEPHLTLEFLEEC 70 (98)
Q Consensus 12 ~~ay~lL~~~~~~F~L~k~~Ll~s~~l~vP~d~t~Fi~~IS~~LA~~~P~LTl~Fl~e~ 70 (98)
++|.+-|+..|+++.+.|. |+ .+..|..+|=+.=.=..-+.+-.||+++
T Consensus 67 ~~Ai~rl~~aL~e~~I~G~---------v~-TN~~fL~~iL~~~~F~~g~~~T~fle~~ 115 (116)
T d1w96a1 67 QASRKHMVVALKELSIRGD---------FR-TTVEYLIKLLETEDFEDNTITTGWLDDL 115 (116)
T ss_dssp HHHHHHHHHHHHHHTTCC--------------CCHHHHHHHTSHHHHTTCCCTTHHHHH
T ss_pred HHHHHHHHHHHHhceEecc---------cc-ccHHHHHHHhCChhhccCCcchHHHHhh
Confidence 7888888889999988761 23 3445555554443333445666666665
No 10
>d1tska_ g.3.7.2 (A:) Toxin ts kappa {Scorpion (Tityus serrulatus) [TaxId: 6887]}
Probab=18.68 E-value=9.6 Score=19.22 Aligned_cols=15 Identities=27% Similarity=0.658 Sum_probs=11.0
Q ss_pred cccccccchHHHHHH
Q psy14865 4 LNVRCYRHEEAQRVL 18 (98)
Q Consensus 4 ~~~~~~~~~~ay~lL 18 (98)
+.-||||+-+.|.--
T Consensus 3 igqrcyrspdcysac 17 (35)
T d1tska_ 3 IGQRCYRSPDCYSAC 17 (35)
T ss_dssp ECCCCSSSCSSHHHH
T ss_pred ccccccCCccHHHHH
Confidence 356999998877643
Done!