BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14871
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q62231|SIX1_MOUSE Homeobox protein SIX1 OS=Mus musculus GN=Six1 PE=1 SV=2
Length = 284
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/184 (91%), Positives = 178/184 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQKD 216
E K+
Sbjct: 183 EAKE 186
>sp|Q15475|SIX1_HUMAN Homeobox protein SIX1 OS=Homo sapiens GN=SIX1 PE=1 SV=1
Length = 284
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/184 (91%), Positives = 178/184 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQKD 216
E K+
Sbjct: 183 EAKE 186
>sp|A1YER0|SIX1_GORGO Homeobox protein SIX1 OS=Gorilla gorilla gorilla GN=SIX1 PE=3 SV=1
Length = 284
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/184 (91%), Positives = 178/184 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQKD 216
E K+
Sbjct: 183 EAKE 186
>sp|A2D5H2|SIX1_LAGLA Homeobox protein SIX1 OS=Lagothrix lagotricha GN=SIX1 PE=3 SV=1
Length = 284
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/184 (91%), Positives = 178/184 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQKD 216
E K+
Sbjct: 183 EAKE 186
>sp|Q62232|SIX2_MOUSE Homeobox protein SIX2 OS=Mus musculus GN=Six2 PE=1 SV=2
Length = 296
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/183 (91%), Positives = 177/183 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63 FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQK 215
E K
Sbjct: 183 EAK 185
>sp|Q9NPC8|SIX2_HUMAN Homeobox protein SIX2 OS=Homo sapiens GN=SIX2 PE=2 SV=1
Length = 291
Score = 362 bits (930), Expect = e-99, Method: Compositional matrix adjust.
Identities = 168/183 (91%), Positives = 177/183 (96%)
Query: 33 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 92
+LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3 MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62
Query: 93 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 152
F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63 FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122
Query: 153 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 212
DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182
Query: 213 EQK 215
E K
Sbjct: 183 EAK 185
>sp|Q27350|SO_DROME Protein sine oculis OS=Drosophila melanogaster GN=so PE=2 SV=1
Length = 416
Score = 362 bits (929), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 176/188 (93%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 93
LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL NESVLKAKA+VAFHRG +
Sbjct: 98 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 157
Query: 94 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 153
K+LYR+LE H FS NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 158 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 217
Query: 154 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 213
GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 218 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 277
Query: 214 QKDGSVTR 221
KDGS +
Sbjct: 278 HKDGSTDK 285
>sp|Q61321|SIX4_MOUSE Homeobox protein SIX4 OS=Mus musculus GN=Six4 PE=2 SV=1
Length = 775
Score = 271 bits (692), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 139/176 (78%)
Query: 35 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 94
P F+ + VACVCE LQQ GN++RL RFLWSLP + L NES+LKA+A+VAFH+G +
Sbjct: 97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156
Query: 95 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 154
+LY ILESH F NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDG
Sbjct: 157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 216
Query: 155 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 210
EET YCFKEKSR+ L++ Y N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 272
>sp|Q9UIU6|SIX4_HUMAN Homeobox protein SIX4 OS=Homo sapiens GN=SIX4 PE=1 SV=2
Length = 781
Score = 270 bits (690), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 120/174 (68%), Positives = 138/174 (79%)
Query: 37 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 96
F+ + VACVCE LQQ GN++RL RFLWSLP + L NES+LKA+A+VAFH+G + +L
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165
Query: 97 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 156
Y ILESH F NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225
Query: 157 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 210
T YCFKEKSR+ L++ Y N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 279
>sp|O95343|SIX3_HUMAN Homeobox protein SIX3 OS=Homo sapiens GN=SIX3 PE=1 SV=1
Length = 332
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP+ F+ EQVA VCE L+++G+IERLGRFLWSLP ACE ++K+ES+L+A+A+VAFH
Sbjct: 82 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 141
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GNF+DLY ILE+H+F+ +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 142 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 201
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++RS+LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 202 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 256
>sp|O42406|SIX3_CHICK Homeobox protein SIX3 OS=Gallus gallus GN=SIX3 PE=2 SV=2
Length = 314
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP+ F+ EQVA VCE L+++G+IERLGRFLWSLP ACE ++K+ES+L+A+A+VAFH
Sbjct: 64 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 123
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GNF+DLY ILE+H+F+ +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 124 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 183
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++RS+LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 184 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 238
>sp|Q62233|SIX3_MOUSE Homeobox protein SIX3 OS=Mus musculus GN=Six3 PE=1 SV=2
Length = 333
Score = 267 bits (682), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP+ F+ EQVA VCE L+++G+IERLGRFLWSLP ACE ++K+ES+L+A+A+VAFH
Sbjct: 83 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 142
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GNF+DLY ILE+H+F+ +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 143 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 202
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++RS+LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 203 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 257
>sp|O95475|SIX6_HUMAN Homeobox protein SIX6 OS=Homo sapiens GN=SIX6 PE=1 SV=2
Length = 246
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP F+ +QVA VCE L++SG++ERLGRFLWSLP ACE L+KNESVL+A+A+VAFH
Sbjct: 4 LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GN+++LY ILE+H+F+ +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++R +LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178
>sp|O93307|SIX6_CHICK Homeobox protein SIX6 OS=Gallus gallus GN=SIX6 PE=2 SV=1
Length = 246
Score = 264 bits (674), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP F+ +QVA VCE L++SG+IERLGRFLWSLP ACE L+KNESVL+A+A+VAFH
Sbjct: 4 LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GN+++LY ILE+H+F+ +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64 TGNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++R +LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178
>sp|Q9QZ28|SIX6_MOUSE Homeobox protein SIX6 OS=Mus musculus GN=Six6 PE=2 SV=2
Length = 246
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)
Query: 34 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 89
LP F+ +QVA VCE L++SG++ERLGRFLWSLP ACE L+KNESVL+A+A+VAFH
Sbjct: 4 LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63
Query: 90 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 149
GN+++LY ILE+H+F+ +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123
Query: 150 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
TIWDGE+ ++CFKE++R +LR+WY +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178
>sp|Q94166|HM33_CAEEL Homeobox protein ceh-33 OS=Caenorhabditis elegans GN=ceh-33 PE=3
SV=1
Length = 261
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 143/180 (79%), Gaps = 4/180 (2%)
Query: 39 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 98
+++EQVAC+CE L S + +L +F+W++ +++ N+ +LKA+A +AFH NFK+LYR
Sbjct: 20 YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77
Query: 99 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 158
I+ESH F+ +H LQ WL AHY EAEK+RGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 78 IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 137
Query: 159 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA--EQKD 216
YCF++KSR +LRDWY N YPSPREKRELAE T LT TQVSNWFKNRRQRDRA E KD
Sbjct: 138 YCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRAGVPEPKD 197
>sp|O73916|SIX3_ORYLA Homeobox protein SIX3 OS=Oryzias latipes GN=six3 PE=2 SV=1
Length = 272
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 144/179 (80%), Gaps = 4/179 (2%)
Query: 30 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAM 85
+S LP F+ Q+A VCE L+++G+IERL RFLWSLP + + ++ESV +A+A+
Sbjct: 41 LSLALPGLCFSATQIASVCETLEETGDIERLARFLWSLPVNTDGRDSISEHESVQRARAV 100
Query: 86 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 145
VAFH G +++LYRILE+H+F+ +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KF
Sbjct: 101 VAFHTGCYRELYRILETHRFTRASHSKLQAMWLEAHYREAEKLRGRPLGPVDKYRVRKKF 160
Query: 146 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 204
PLPRTIWDGE+ ++CFKE++R +LR+WY +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 161 PLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTPTQVGNWFKN 219
>sp|Q95RW8|OPTIX_DROME Protein Optix OS=Drosophila melanogaster GN=Optix PE=2 SV=1
Length = 487
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 153/204 (75%), Gaps = 18/204 (8%)
Query: 6 PSNHQILGSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLW 65
P++HQI+ + I + +P+ F+ QV VC+ L+ SG+IERL RFLW
Sbjct: 18 PTHHQIIAPSPILA--------------VPTLAFSAAQVEIVCKTLEDSGDIERLARFLW 63
Query: 66 SLP-ACEKLHK---NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAH 121
SLP A +H+ E+VL+A+A+VA+H GNF++LY I+E+H+F+ ++ KLQA+WL+AH
Sbjct: 64 SLPVALPNMHEILNCEAVLRARAVVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAH 123
Query: 122 YVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSP 181
Y+EAEKLRGR LG V KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY +PYP+P
Sbjct: 124 YIEAEKLRGRSLGPVDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNP 183
Query: 182 REKRELAEATGLTTTQVSNWFKNR 205
+KRELA+ATGL TQV NWFKNR
Sbjct: 184 TKKRELAKATGLNPTQVGNWFKNR 207
>sp|Q8N196|SIX5_HUMAN Homeobox protein SIX5 OS=Homo sapiens GN=SIX5 PE=1 SV=3
Length = 739
Score = 234 bits (596), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 139/198 (70%), Gaps = 5/198 (2%)
Query: 13 GSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEK 72
GS + SP + S F+ EQVACVCE L Q+G+ RL RFL +LP E+
Sbjct: 65 GSPGVPGSPPEAASEPPTG-----LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAER 119
Query: 73 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRP 132
L ++ VL+A+A+VAF RG + +LYR+LES F +H LQ L+L+A Y EAE+ RGR
Sbjct: 120 LRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRA 179
Query: 133 LGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATG 192
LGAV KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+ Y N YP+P EKR LA TG
Sbjct: 180 LGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTG 239
Query: 193 LTTTQVSNWFKNRRQRDR 210
L+ TQVSNWFKNRRQRDR
Sbjct: 240 LSLTQVSNWFKNRRQRDR 257
>sp|P70178|SIX5_MOUSE Homeobox protein SIX5 OS=Mus musculus GN=Six5 PE=1 SV=2
Length = 719
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 132/172 (76%)
Query: 39 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 98
F+ EQVACVCE L Q+G+ RL RFL +LP E+L ++ VL+A+A+VAF RG + +LY+
Sbjct: 79 FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYQ 138
Query: 99 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 158
+LES F +H LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET
Sbjct: 139 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 198
Query: 159 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 210
YCFKE+SR+ L+ Y N YP+P EKR LA TGL+ TQVSNWFKNRRQRDR
Sbjct: 199 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 250
>sp|Q94165|HM34_CAEEL Homeobox protein ceh-34 OS=Caenorhabditis elegans GN=ceh-34 PE=3
SV=2
Length = 256
Score = 213 bits (543), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
Query: 38 GFTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 93
++++++ C+CE L Q+G E+L F+++LP C ++ ESVLKA+A+V F N+
Sbjct: 16 SYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLPQCYQVM--ESVLKAQALVYFTTQNW 73
Query: 94 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 153
K LY++LE +FSPHNH LQ LWL AHY EA K + R LGAV KYR+R+K P P TIWD
Sbjct: 74 KMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELGAVCKYRIRKKNPFPNTIWD 133
Query: 154 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 213
GEET+YCFK KSR+VLRD Y YPS +KR LA+ T L+ QVSNWFKN+RQR+RAA
Sbjct: 134 GEETNYCFKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAG 193
Query: 214 QKDGSVTRSVHSFRVNIGGGSK 235
Q D S RS S + G SK
Sbjct: 194 QLDRSSARSNDSDDGSSGCESK 215
>sp|Q23175|HM32_CAEEL Homeobox protein ceh-32 OS=Caenorhabditis elegans GN=ceh-32 PE=1
SV=2
Length = 439
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 140/199 (70%), Gaps = 15/199 (7%)
Query: 22 NTSTSTASISPILPSF-------------GFTQEQVACVCEVLQQSGNIERLGRFLWSLP 68
N ++ST S+ P +PS T +Q+ CE L+ G+++ L RF+ ++P
Sbjct: 38 NGASSTPSLFPAMPSVIPSLAAPSSPTTSNLTADQIVKTCEQLETDGDVDGLFRFMCTIP 97
Query: 69 A--CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 126
+++ NE+ L+A+A+V FH +F++LY ILE+++FSP HPKLQ +W +AHY E E
Sbjct: 98 PQKTQEVAGNEAFLRARALVCFHASHFRELYAILENNKFSPKYHPKLQEMWHEAHYREQE 157
Query: 127 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 186
K RG+ L AV KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY +PYP+P +K+E
Sbjct: 158 KNRGKSLCAVDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKE 217
Query: 187 LAEATGLTTTQVSNWFKNR 205
LA ATGLT QV NWFKNR
Sbjct: 218 LANATGLTQMQVGNWFKNR 236
>sp|P53147|TOS8_YEAST Homeobox protein TOS8 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TOS8 PE=3 SV=1
Length = 276
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 167 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVTRSV 223
S+L W + +NPYP+ +EKREL TGLT Q+SNWF N R+R + Q D + R
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDANNFRRK 266
Query: 224 HSFRVNIG 231
S N+
Sbjct: 267 FSSSTNLA 274
>sp|A8WL06|UNC62_CAEBR Homeobox protein unc-62 OS=Caenorhabditis briggsae GN=unc-62 PE=3
SV=2
Length = 725
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 130 GRPLGAVGKYRVRRKFPLPRTIWDGEETSY----------------CFKEKSRSVLRDWY 173
G P G VGK R R +F + + DG ++ F +++ + R W
Sbjct: 512 GTPNGRVGKSRGRDEFSVCGSNEDGRDSVLSDSANGSQNGKRKVPKVFSKEAITKFRAWL 571
Query: 174 THN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
N PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 572 FQNLAHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 609
>sp|E9PGG2|ANHX_HUMAN Anomalous homeobox protein OS=Homo sapiens GN=ANHX PE=2 SV=1
Length = 379
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 73 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 131
L N V A A V + + R+LE Q P +L LW HY + +L
Sbjct: 55 LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113
Query: 132 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 190
L V K+R R++ P P ++ S F + R L ++ N PS E+ LA
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173
Query: 191 TGLTTTQVSNWFKNRRQRDRAAEQ 214
T LT QV NWF N R+R RA Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197
>sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2 OS=Homo sapiens GN=PBX2
PE=1 SV=2
Length = 430
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 214
F +++ VL ++ Y+H NPYPS K ELA+ G+T +QVSNWF N+R +++ Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310
Query: 215 KDGSVTRSVHSFRVNIGGGSKT 236
++ ++ + V GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332
>sp|P48731|ATH1_ARATH Homeobox protein ATH1 OS=Arabidopsis thaliana GN=ATH1 PE=1 SV=1
Length = 473
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 163 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
EKS SVLR+W N PYP EK LA +GLT +QVSNWF N R R
Sbjct: 381 EKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVR 429
>sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2 OS=Mus musculus GN=Pbx2
PE=1 SV=1
Length = 430
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 214
F +++ VL ++ Y+H NPYPS K ELA+ G+T +QVSNWF N+R +++ Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310
Query: 215 KDGSVTRSVHSFRVNIGGGSKT 236
++ ++ + V GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332
>sp|P41778|PBX1_MOUSE Pre-B-cell leukemia transcription factor 1 OS=Mus musculus GN=Pbx1
PE=1 SV=2
Length = 430
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ +L ++ Y+H NPYPS K ELA+ G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290
>sp|P40424|PBX1_HUMAN Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens GN=PBX1
PE=1 SV=1
Length = 430
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ +L ++ Y+H NPYPS K ELA+ G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290
>sp|Q9BYU1|PBX4_HUMAN Pre-B-cell leukemia transcription factor 4 OS=Homo sapiens GN=PBX4
PE=2 SV=2
Length = 374
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ VL ++ Y+H NPYPS K ELA GLT +QVSNWF N+R R
Sbjct: 217 FSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIR 267
>sp|B3DM47|PBX2_XENTR Pre-B-cell leukemia transcription factor 2 OS=Xenopus tropicalis
GN=pbx2 PE=2 SV=1
Length = 422
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ VL ++ Y+H NPYPS K ELA+ G+T +QVSNWF N+R R
Sbjct: 244 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 294
>sp|Q9N5D6|UNC62_CAEEL Homeobox protein unc-62 OS=Caenorhabditis elegans GN=unc-62 PE=1
SV=1
Length = 564
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 160 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ + R W HN PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 398 VFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449
>sp|P41779|HM20_CAEEL Homeobox protein ceh-20 OS=Caenorhabditis elegans GN=ceh-20 PE=2
SV=1
Length = 338
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 214
F +++ VL ++ Y H NPYPS K +LA +T +QVSNWF N+R +++ A Q
Sbjct: 195 FSKQATEVLNEYFYGHLSNPYPSEEAKEDLARQCNITVSQVSNWFGNKRIRYKKNMAKAQ 254
Query: 215 KDGSVTRSVHSFRVNIGG 232
++ S+ + + V +GG
Sbjct: 255 EEASMYAAKKNAHVTLGG 272
>sp|Q7PMT1|EXD_ANOGA Homeobox protein extradenticle OS=Anopheles gambiae GN=exd PE=3
SV=2
Length = 362
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ +L ++ Y+H NPYPS K ELA G+T +QVSNWF N+R R
Sbjct: 233 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 283
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 164 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRD-RAAEQKDGSV 219
++R L DW++ + PYPS ++K LAE+TGL Q++NWF N+R+R + +E V
Sbjct: 295 EARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 354
Query: 220 ---TRSVHSFRVNIGG 232
T +H F N+ G
Sbjct: 355 MDATHPLHYFMGNVLG 370
>sp|P40427|EXD_DROME Homeobox protein extradenticle OS=Drosophila melanogaster GN=exd
PE=1 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ +L ++ Y+H NPYPS K ELA G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295
>sp|Q29CT2|EXD_DROPS Homeobox protein extradenticle OS=Drosophila pseudoobscura
pseudoobscura GN=exd PE=3 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ +L ++ Y+H NPYPS K ELA G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295
>sp|P97367|MEIS2_MOUSE Homeobox protein Meis2 OS=Mus musculus GN=Meis2 PE=1 SV=2
Length = 477
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>sp|Q6DIF3|MEIS3_XENTR Homeobox protein meis3 OS=Xenopus tropicalis GN=meis3 PE=2 SV=2
Length = 453
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 274 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 324
>sp|O14770|MEIS2_HUMAN Homeobox protein Meis2 OS=Homo sapiens GN=MEIS2 PE=1 SV=2
Length = 477
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>sp|Q7ZY13|MEI3B_XENLA Homeobox protein meis3-B OS=Xenopus laevis GN=meis3-b PE=2 SV=2
Length = 451
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 274 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 324
>sp|Q5U4X3|MEI3A_XENLA Homeobox protein meis3-A OS=Xenopus laevis GN=meis3-a PE=2 SV=1
Length = 453
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 274 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 324
>sp|Q99NE9|PBX4_MOUSE Pre-B-cell leukemia transcription factor 4 OS=Mus musculus GN=Pbx4
PE=2 SV=2
Length = 378
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F +++ VL ++ Y+H NPYPS K ELA G+T +QVSNWF N+R R
Sbjct: 222 FSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIR 272
>sp|Q8S897|BLH5_ARATH BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5
PE=2 SV=2
Length = 431
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 163 EKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
EK+ SVLR W + H +PYP +K LA+ TGLT +QVSNWF N R R
Sbjct: 237 EKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVR 285
>sp|O00470|MEIS1_HUMAN Homeobox protein Meis1 OS=Homo sapiens GN=MEIS1 PE=1 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 279 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|Q60954|MEIS1_MOUSE Homeobox protein Meis1 OS=Mus musculus GN=Meis1 PE=1 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 279 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|O46339|HTH_DROME Homeobox protein homothorax OS=Drosophila melanogaster GN=hth PE=1
SV=1
Length = 487
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + ++LR W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 372 FPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRR 422
>sp|P79937|MEIS1_XENLA Homeobox protein Meis1 OS=Xenopus laevis GN=meis1 PE=1 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + H +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 279 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 161 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 208
F + + +++R W + +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 269 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,386,418
Number of Sequences: 539616
Number of extensions: 3503239
Number of successful extensions: 10571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 9423
Number of HSP's gapped (non-prelim): 1227
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)