BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14872
         (414 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|149737281|ref|XP_001492836.1| PREDICTED: homeobox protein SIX1-like [Equus caballus]
          Length = 536

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/229 (78%), Positives = 193/229 (84%), Gaps = 1/229 (0%)

Query: 168 YPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACV 227
           Y  PRE    + A  L       +F SA     P ++   A    +LPSFGFTQEQVACV
Sbjct: 211 YGKPREGVRSSRAP-LPAAASPCFFGSAPCRVRPGSAPRQAPAMSMLPSFGFTQEQVACV 269

Query: 228 CEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
           CEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSP
Sbjct: 270 CEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSP 329

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
           HNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR 
Sbjct: 330 HNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRG 389

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 390 VLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 438



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 358 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 417

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 418 TQVSNWF 424


>gi|328709554|ref|XP_003243994.1| PREDICTED: hypothetical protein LOC100160072 [Acyrthosiphon pisum]
          Length = 428

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/188 (92%), Positives = 184/188 (97%)

Query: 210 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFH 269
           ++P+LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP+C+KLHK+ESVLKAKA+VAFH
Sbjct: 66  MTPLLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPSCDKLHKHESVLKAKAIVAFH 125

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
           RGNFK+LYR+LES+QFS HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR
Sbjct: 126 RGNFKELYRLLESNQFSAHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 185

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGEETSYCFKEKSR VLR+WY  NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD
Sbjct: 186 TIWDGEETSYCFKEKSRMVLREWYASNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 245

Query: 390 RAAEQKDG 397
           RAAEQKDG
Sbjct: 246 RAAEQKDG 253



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 63/67 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY  NPYPSPREKRELAEATGLTT
Sbjct: 172 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRMVLREWYASNPYPSPREKRELAEATGLTT 231

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 232 TQVSNWF 238


>gi|410898072|ref|XP_003962522.1| PREDICTED: homeobox protein SIX1-like [Takifugu rubripes]
          Length = 284

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/201 (87%), Positives = 187/201 (93%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N GG+ + Q
Sbjct: 183 EAKE-RENSENSNAGGNKQNQ 202



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|47230132|emb|CAG10546.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 284

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/201 (87%), Positives = 187/201 (93%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N GG+ + Q
Sbjct: 183 EAKE-RENSENNNAGGNKQNQ 202



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|432936891|ref|XP_004082330.1| PREDICTED: homeobox protein SIX1-like [Oryzias latipes]
          Length = 284

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/201 (87%), Positives = 187/201 (93%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N GG+ + Q
Sbjct: 183 EAKE-RENSENNNAGGNKQNQ 202



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|348531170|ref|XP_003453083.1| PREDICTED: homeobox protein SIX1-like [Oreochromis niloticus]
          Length = 284

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/201 (87%), Positives = 187/201 (93%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N GG+ + Q
Sbjct: 183 EAKE-RENSENNNAGGNKQNQ 202



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|390338697|ref|XP_781551.3| PREDICTED: homeobox protein SIX1 [Strongylocentrotus purpuratus]
 gi|374534027|gb|AEZ53927.1| Six1 [Strongylocentrotus purpuratus]
          Length = 336

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/201 (87%), Positives = 188/201 (93%), Gaps = 6/201 (2%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEHLHKNESVLKAKAIVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILES+ FSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FRELYKILESNNFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRS+LR+WY+HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRSILREWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+      R N   +SKT+
Sbjct: 181 EAKE------RENAEQESKTK 195



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRS+LR+WY+HNPYPSPREKRELAEATGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSILREWYSHNPYPSPREKRELAEATGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|440910225|gb|ELR60042.1| Homeobox protein SIX1, partial [Bos grunniens mutus]
          Length = 357

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/266 (69%), Positives = 204/266 (76%), Gaps = 8/266 (3%)

Query: 131 VRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSN 190
           V R F   R ++    +S  +      VL  +Y    +  PRE      A  L       
Sbjct: 2   VSRPFLFQRALY----SSSTYSAARLQVLTRFYA---FAQPREGVRSCRAP-LPAAASPC 53

Query: 191 WFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
           +F  A     P ++   A    +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC
Sbjct: 54  FFGFAPCRVRPGSAPRQAPAMSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPAC 113

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           + LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRG
Sbjct: 114 DHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRG 173

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEA
Sbjct: 174 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEA 233

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 234 TGLTTTQVSNWFKNRRQRDRAAEAKE 259



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 179 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 238

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 239 TQVSNWF 245


>gi|119902749|ref|XP_588692.2| PREDICTED: homeobox protein SIX1 [Bos taurus]
 gi|359069682|ref|XP_002691065.2| PREDICTED: homeobox protein SIX1 [Bos taurus]
          Length = 484

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/206 (83%), Positives = 185/206 (89%)

Query: 191 WFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
           +F  A     P ++   A    +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC
Sbjct: 181 FFGFAPCRVRPGSAPRQAPAMSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPAC 240

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           + LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRG
Sbjct: 241 DHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRG 300

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEA
Sbjct: 301 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEA 360

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 361 TGLTTTQVSNWFKNRRQRDRAAEAKE 386



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 306 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 365

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 366 TQVSNWF 372


>gi|47218210|emb|CAF97074.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 288

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 180/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|18859361|ref|NP_571858.1| homeobox protein SIX2 [Danio rerio]
 gi|13536987|dbj|BAB40699.1| homeobox protein six2.1 [Danio rerio]
 gi|50927148|gb|AAH79528.1| Sine oculis homeobox homolog 2.1 [Danio rerio]
 gi|182890536|gb|AAI64650.1| Six2.1 protein [Danio rerio]
          Length = 288

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/184 (92%), Positives = 180/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|46309555|ref|NP_996978.1| homeobox protein SIX1 [Danio rerio]
 gi|42542497|gb|AAH66396.1| Sine oculis homeobox homolog 1b [Danio rerio]
 gi|42822039|gb|AAS46283.1| homeodomain transcription factor six1a [Danio rerio]
          Length = 284

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/201 (86%), Positives = 186/201 (92%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N G + + Q
Sbjct: 183 EAKE-RENSENNNTGANKQNQ 202



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|296483047|tpg|DAA25162.1| TPA: SIX homeobox 1 [Bos taurus]
          Length = 567

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/206 (83%), Positives = 185/206 (89%)

Query: 191 WFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
           +F  A     P ++   A    +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC
Sbjct: 264 FFGFAPCRVRPGSAPRQAPAMSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPAC 323

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           + LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRG
Sbjct: 324 DHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRG 383

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEA
Sbjct: 384 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEA 443

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 444 TGLTTTQVSNWFKNRRQRDRAAEAKE 469



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 389 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 448

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 449 TQVSNWF 455


>gi|115305298|gb|AAI23734.1| SIX1 protein [Bos taurus]
          Length = 357

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/206 (83%), Positives = 185/206 (89%)

Query: 191 WFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
           +F  A     P ++   A    +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC
Sbjct: 54  FFGFAPCRVRPGSAPRQAPAMSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPAC 113

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           + LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRG
Sbjct: 114 DHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRG 173

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEA
Sbjct: 174 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEA 233

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 234 TGLTTTQVSNWFKNRRQRDRAAEAKE 259



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 179 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 238

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 239 TQVSNWF 245


>gi|410350591|gb|JAA41899.1| SIX homeobox 1 [Pan troglodytes]
          Length = 284

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/184 (92%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|270008300|gb|EFA04748.1| sine oculis [Tribolium castaneum]
          Length = 271

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/183 (92%), Positives = 180/183 (98%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GN+ERLGRFLWSLPAC+KLH NESVLKAKA+VAFHRGNF
Sbjct: 52  LPSFGFTQEQVACVCEVLQQAGNVERLGRFLWSLPACDKLHNNESVLKAKAIVAFHRGNF 111

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LY+ILESHQFSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 112 KELYKILESHQFSPHNHAKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 171

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 172 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTTTQVSNWFKNRRQRDRAAE 231

Query: 394 QKD 396
            KD
Sbjct: 232 HKD 234



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTT
Sbjct: 154 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTT 213

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 214 TQVSNWF 220


>gi|432903114|ref|XP_004077098.1| PREDICTED: homeobox protein SIX2-like [Oryzias latipes]
          Length = 290

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/183 (92%), Positives = 179/183 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|453056000|pdb|4EGC|A Chain A, Crystal Structure Of Mbp-fused Human Six1 Bound To Human
           Eya2 Eya Domain
          Length = 559

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 373 MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 432

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 433 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 492

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 493 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 552

Query: 393 EQKD 396
           E K+
Sbjct: 553 EAKE 556



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 476 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 535

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 536 TQVSNWFKN 544


>gi|410932993|ref|XP_003979877.1| PREDICTED: homeobox protein SIX2-like [Takifugu rubripes]
          Length = 288

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 180/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|242021521|ref|XP_002431193.1| Homeobox protein SIX1, putative [Pediculus humanus corporis]
 gi|212516442|gb|EEB18455.1| Homeobox protein SIX1, putative [Pediculus humanus corporis]
          Length = 282

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/178 (96%), Positives = 178/178 (100%)

Query: 221 QEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRIL 280
           +EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK+ESVLKAKA+VAFHRGNFK+LYRIL
Sbjct: 6   EEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKHESVLKAKAIVAFHRGNFKELYRIL 65

Query: 281 ESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYC 340
           ESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYC
Sbjct: 66  ESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYC 125

Query: 341 FKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           FKEKSRSVLRDWY+HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG+
Sbjct: 126 FKEKSRSVLRDWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGT 183



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELAEATGLTT
Sbjct: 101 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELAEATGLTT 160

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 161 TQVSNWF 167


>gi|189237051|ref|XP_972167.2| PREDICTED: sine oculis [Tribolium castaneum]
          Length = 301

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/183 (92%), Positives = 180/183 (98%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GN+ERLGRFLWSLPAC+KLH NESVLKAKA+VAFHRGNF
Sbjct: 52  LPSFGFTQEQVACVCEVLQQAGNVERLGRFLWSLPACDKLHNNESVLKAKAIVAFHRGNF 111

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LY+ILESHQFSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 112 KELYKILESHQFSPHNHAKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 171

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 172 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTTTQVSNWFKNRRQRDRAAE 231

Query: 394 QKD 396
            KD
Sbjct: 232 HKD 234



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTT
Sbjct: 154 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTT 213

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 214 TQVSNWF 220


>gi|240265401|gb|ACS50141.1| sine oculis [Tribolium castaneum]
          Length = 251

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/183 (92%), Positives = 180/183 (98%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GN+ERLGRFLWSLPAC+KLH NESVLKAKA+VAFHRGNF
Sbjct: 32  LPSFGFTQEQVACVCEVLQQAGNVERLGRFLWSLPACDKLHNNESVLKAKAIVAFHRGNF 91

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LY+ILESHQFSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 92  KELYKILESHQFSPHNHAKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 151

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 152 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTTTQVSNWFKNRRQRDRAAE 211

Query: 394 QKD 396
            KD
Sbjct: 212 HKD 214



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+ATGLTT
Sbjct: 134 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADATGLTT 193

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 194 TQVSNWF 200


>gi|38602680|dbj|BAD02832.1| homeodomain protein Six1/2 [Halocynthia roretzi]
          Length = 449

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/229 (76%), Positives = 190/229 (82%), Gaps = 6/229 (2%)

Query: 188 VSNWFSSANITSSPNTSTSTASISPILP----SFGFTQEQVACVCEVLQQSGNIERLGRF 243
           V++   + +++S    S S  S+ P  P    SFGFTQEQVACVCEVLQQ GNIERL RF
Sbjct: 39  VTSAGQNVHLSSGHMASHSGMSLLPAAPPTSLSFGFTQEQVACVCEVLQQGGNIERLARF 98

Query: 244 LWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYV 303
           LWSLPACE LHKNESVLKAKA+VAFHRGNF++LY++LESH FSPHNHPKLQ LWLKAHY+
Sbjct: 99  LWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKLLESHNFSPHNHPKLQQLWLKAHYI 158

Query: 304 EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPRE 363
           EAEKLRGRPLGAVGKYRVRRKFPLPR IWDGEETSYCFKEKSR+ LR+WY HNPYPSPRE
Sbjct: 159 EAEKLRGRPLGAVGKYRVRRKFPLPRCIWDGEETSYCFKEKSRAALREWYAHNPYPSPRE 218

Query: 364 KRELAEATGLTTTQVSNWFKNRRQRDRAAEQK--DGSVHSFRVNIGGDS 410
           KRELAEATGLT TQVSNWFKNRRQRDRAAE K  DGS       I GD 
Sbjct: 219 KRELAEATGLTVTQVSNWFKNRRQRDRAAEAKERDGSEAGMSGGISGDG 267



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR IWDGEETSYCFKEKSR+ LR+WY HNPYPSPREKRELAEATGLT 
Sbjct: 171 VGKYRVRRKFPLPRCIWDGEETSYCFKEKSRAALREWYAHNPYPSPREKRELAEATGLTV 230

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 231 TQVSNWF 237


>gi|405951108|gb|EKC19049.1| Homeobox protein SIX1 [Crassostrea gigas]
          Length = 295

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/194 (88%), Positives = 185/194 (95%), Gaps = 1/194 (0%)

Query: 204 STSTASISP-ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKA 262
           ++S  S +P +LPSFGFTQEQVACVCEVLQQ GNI+RL RFLWSLPACE LHKNESVLKA
Sbjct: 8   TSSVGSPNPAMLPSFGFTQEQVACVCEVLQQGGNIDRLARFLWSLPACEHLHKNESVLKA 67

Query: 263 KAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVR 322
           KA+VAFHRGNFK+LY++LES+ FSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVR
Sbjct: 68  KAVVAFHRGNFKELYKMLESNNFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVR 127

Query: 323 RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 382
           RKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTTTQVSNWF
Sbjct: 128 RKFPLPRTIWDGEETSYCFKEKSRTILREWYQHNPYPSPREKRELAEATGLTTTQVSNWF 187

Query: 383 KNRRQRDRAAEQKD 396
           KNRRQRDRAAEQKD
Sbjct: 188 KNRRQRDRAAEQKD 201



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 121 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRTILREWYQHNPYPSPREKRELAEATGLTT 180

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 181 TQVSNWF 187


>gi|213513223|ref|NP_001133100.1| sine oculis homeobox like 1 [Salmo salar]
 gi|197631933|gb|ACH70690.1| sine oculis homeobox like 1 [Salmo salar]
          Length = 284

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/184 (92%), Positives = 179/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|19309907|emb|CAC86663.1| Six2 protein [Platynereis dumerilii]
          Length = 307

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/184 (92%), Positives = 179/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GNIERL RFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPSFGFTQEQVACVCEVLQQGGNIERLARFLWSLPACEHLHKNESVLKAKAVVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           FK+LY++LESHQFSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FKELYKLLESHQFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQKD 396
           E KD
Sbjct: 181 EVKD 184



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|158301041|ref|XP_320814.4| AGAP011695-PA [Anopheles gambiae str. PEST]
 gi|157013450|gb|EAA00668.4| AGAP011695-PA [Anopheles gambiae str. PEST]
          Length = 366

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/183 (92%), Positives = 177/183 (96%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GN+ERLGRFLWSLP C+KL  +ESVLKAKA+VAFHRGNF
Sbjct: 61  LPSFGFTQEQVACVCEVLQQAGNVERLGRFLWSLPQCDKLQLHESVLKAKAVVAFHRGNF 120

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE HQ+SPHNH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 121 KELYRLLEHHQYSPHNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 180

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 181 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 240

Query: 394 QKD 396
            KD
Sbjct: 241 HKD 243



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/67 (97%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT
Sbjct: 163 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 222

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 223 TQVSNWF 229


>gi|348501598|ref|XP_003438356.1| PREDICTED: homeobox protein SIX2-like [Oreochromis niloticus]
          Length = 290

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/183 (92%), Positives = 179/183 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRS+LR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSILREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|395510199|ref|XP_003759368.1| PREDICTED: homeobox protein SIX1 [Sarcophilus harrisii]
          Length = 284

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|334310367|ref|XP_001377489.2| PREDICTED: homeobox protein SIX1-like [Monodelphis domestica]
          Length = 284

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|291621638|ref|NP_001167584.1| homeobox protein SIX1 [Ovis aries]
 gi|261291396|gb|ACX69846.1| Six1 [Ovis aries]
          Length = 284

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|296215199|ref|XP_002754023.1| PREDICTED: homeobox protein SIX1 [Callithrix jacchus]
          Length = 284

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|148234459|ref|NP_001089925.1| uncharacterized protein LOC734994 [Xenopus laevis]
 gi|83405103|gb|AAI10745.1| MGC130961 protein [Xenopus laevis]
          Length = 276

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLG FLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGSFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|444728560|gb|ELW69010.1| Homeobox protein SIX1 [Tupaia chinensis]
          Length = 284

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|209954660|ref|NP_446211.1| sine oculis-related homeobox 1 homolog [Rattus norvegicus]
 gi|226958387|ref|NP_033215.2| homeobox protein SIX1 [Mus musculus]
 gi|354502100|ref|XP_003513125.1| PREDICTED: homeobox protein SIX1-like [Cricetulus griseus]
 gi|46397863|sp|Q62231.2|SIX1_MOUSE RecName: Full=Homeobox protein SIX1; AltName: Full=Sine oculis
           homeobox homolog 1
 gi|23273881|gb|AAH23304.1| Sine oculis-related homeobox 1 homolog (Drosophila) [Mus musculus]
 gi|74203436|dbj|BAE20875.1| unnamed protein product [Mus musculus]
 gi|149051434|gb|EDM03607.1| sine oculis homeobox homolog 1 (Drosophila) [Rattus norvegicus]
 gi|344256036|gb|EGW12140.1| Homeobox protein SIX1 [Cricetulus griseus]
 gi|346577477|gb|AEO36975.1| Six1 [Microtus arvalis]
          Length = 284

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|348573555|ref|XP_003472556.1| PREDICTED: homeobox protein SIX1-like [Cavia porcellus]
          Length = 284

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|291406529|ref|XP_002719591.1| PREDICTED: SIX homeobox 1 [Oryctolagus cuniculus]
          Length = 284

 Score =  370 bits (949), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|314122371|ref|NP_001186647.1| homeobox protein SIX1 [Sus scrofa]
 gi|312233885|gb|ADQ54113.1| six homeobox 1 [Sus scrofa]
 gi|312233887|gb|ADQ54114.1| six homeobox 1 [Sus scrofa]
          Length = 284

 Score =  370 bits (949), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|297695237|ref|XP_002824855.1| PREDICTED: homeobox protein SIX1 [Pongo abelii]
 gi|332237244|ref|XP_003267814.1| PREDICTED: homeobox protein SIX1 [Nomascus leucogenys]
 gi|345804447|ref|XP_547841.3| PREDICTED: homeobox protein SIX1 [Canis lupus familiaris]
 gi|403264352|ref|XP_003924450.1| PREDICTED: homeobox protein SIX1 [Saimiri boliviensis boliviensis]
 gi|410962398|ref|XP_003987757.1| PREDICTED: homeobox protein SIX1 [Felis catus]
 gi|146325732|sp|A2D5H2.1|SIX1_LAGLA RecName: Full=Homeobox protein SIX1; AltName: Full=Sine oculis
           homeobox homolog 1
 gi|122934851|gb|ABM68164.1| SIX1 [Lagothrix lagotricha]
 gi|351713870|gb|EHB16789.1| Homeobox protein SIX1 [Heterocephalus glaber]
 gi|432096679|gb|ELK27262.1| Homeobox protein SIX1 [Myotis davidii]
          Length = 284

 Score =  370 bits (949), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|5174681|ref|NP_005973.1| homeobox protein SIX1 [Homo sapiens]
 gi|114653353|ref|XP_509988.2| PREDICTED: homeobox protein SIX1 [Pan troglodytes]
 gi|397523323|ref|XP_003831684.1| PREDICTED: homeobox protein SIX1 [Pan paniscus]
 gi|426377088|ref|XP_004055308.1| PREDICTED: homeobox protein SIX1 [Gorilla gorilla gorilla]
 gi|2495290|sp|Q15475.1|SIX1_HUMAN RecName: Full=Homeobox protein SIX1; AltName: Full=Sine oculis
           homeobox homolog 1
 gi|146325731|sp|A1YER0.1|SIX1_GORGO RecName: Full=Homeobox protein SIX1; AltName: Full=Sine oculis
           homeobox homolog 1
 gi|12744793|gb|AAK06772.1|AF323497_1 SIX1 [Homo sapiens]
 gi|1246761|emb|CAA62974.1| six1 [Homo sapiens]
 gi|119601191|gb|EAW80785.1| sine oculis homeobox homolog 1 (Drosophila), isoform CRA_b [Homo
           sapiens]
 gi|120974060|gb|ABM46628.1| SIX1 [Gorilla gorilla]
 gi|410256922|gb|JAA16428.1| SIX homeobox 1 [Pan troglodytes]
 gi|410256924|gb|JAA16429.1| SIX homeobox 1 [Pan troglodytes]
 gi|410296262|gb|JAA26731.1| SIX homeobox 1 [Pan troglodytes]
 gi|410350587|gb|JAA41897.1| SIX homeobox 1 [Pan troglodytes]
 gi|410350589|gb|JAA41898.1| SIX homeobox 1 [Pan troglodytes]
 gi|410350593|gb|JAA41900.1| SIX homeobox 1 [Pan troglodytes]
 gi|410350595|gb|JAA41901.1| SIX homeobox 1 [Pan troglodytes]
          Length = 284

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|301754477|ref|XP_002913075.1| PREDICTED: homeobox protein SIX1-like [Ailuropoda melanoleuca]
 gi|281349354|gb|EFB24938.1| hypothetical protein PANDA_000848 [Ailuropoda melanoleuca]
          Length = 284

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|109083837|ref|XP_001096585.1| PREDICTED: homeobox protein SIX1 [Macaca mulatta]
 gi|395843402|ref|XP_003794474.1| PREDICTED: homeobox protein SIX1 [Otolemur garnettii]
          Length = 284

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|431904450|gb|ELK09833.1| Homeobox protein SIX1 [Pteropus alecto]
          Length = 284

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|154147547|ref|NP_001093745.1| SIX homeobox 2 [Xenopus (Silurana) tropicalis]
 gi|134025761|gb|AAI35533.1| six2 protein [Xenopus (Silurana) tropicalis]
          Length = 289

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILE HQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILEGHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|291230538|ref|XP_002735213.1| PREDICTED: SIX homeobox 1-like [Saccoglossus kowalevskii]
 gi|337217041|gb|AEI60181.1| SIX homeobox 1 [Saccoglossus kowalevskii]
          Length = 296

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 167/184 (90%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEHLHKNESVLKAKAIVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILES+ F+P NHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FRELYKILESNNFNPQNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY+HNPYPSPREKRELAE TGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRGVLREWYSHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQKD 396
           E K+
Sbjct: 181 EAKE 184



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY+HNPYPSPREKRELAE TGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYSHNPYPSPREKRELAEGTGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|148226314|ref|NP_001082027.1| SIX homeobox 1 [Xenopus laevis]
 gi|9652166|gb|AAF91422.1|AF279254_1 homeobox protein SIX1 [Xenopus laevis]
 gi|213624978|gb|AAI69552.1| Homeobox protein SIX1 [Xenopus laevis]
 gi|213625147|gb|AAI69929.1| Homeobox protein SIX1 [Xenopus laevis]
          Length = 284

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|355693331|gb|EHH27934.1| hypothetical protein EGK_18251 [Macaca mulatta]
          Length = 282

 Score =  369 bits (947), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQKD 396
           E K+
Sbjct: 181 EAKE 184



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|148704568|gb|EDL36515.1| sine oculis-related homeobox 1 homolog (Drosophila) [Mus musculus]
          Length = 348

 Score =  369 bits (947), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 67  MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 126

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 127 FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 186

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 187 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 246

Query: 393 EQKD 396
           E K+
Sbjct: 247 EAKE 250



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 170 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 229

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 230 TQVSNWF 236


>gi|443732547|gb|ELU17231.1| hypothetical protein CAPTEDRAFT_180303 [Capitella teleta]
          Length = 346

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 170/196 (86%), Positives = 181/196 (92%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           FGFTQEQVACVCEVLQ SGNIERL RFLWSLPACE LHKNESVLKAKA+VAFHRGNFK+L
Sbjct: 33  FGFTQEQVACVCEVLQNSGNIERLARFLWSLPACEHLHKNESVLKAKAVVAFHRGNFKEL 92

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y+ILES  FSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE
Sbjct: 93  YKILESQTFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 152

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TSYCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE KD
Sbjct: 153 TSYCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKD 212

Query: 397 GSVHSFRVNIGGDSKT 412
                  +++GG S++
Sbjct: 213 REPGQSSLDVGGQSQS 228



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 132 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTT 191

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 192 TQVSNWF 198


>gi|154147583|ref|NP_001093693.1| SIX homeobox 1 [Xenopus (Silurana) tropicalis]
 gi|134023871|gb|AAI35609.1| six1 protein [Xenopus (Silurana) tropicalis]
          Length = 284

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|327280037|ref|XP_003224761.1| PREDICTED: homeobox protein SIX1-like [Anolis carolinensis]
          Length = 405

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 113 LLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 172

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFS HNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 173 FRELYKILESHQFSAHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 232

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 233 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 292

Query: 393 EQKD 396
           E K+
Sbjct: 293 EAKE 296



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 216 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 275

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 276 TQVSNWF 282


>gi|395508098|ref|XP_003758352.1| PREDICTED: homeobox protein SIX2 [Sarcophilus harrisii]
          Length = 292

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 179/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|327280963|ref|XP_003225220.1| PREDICTED: homeobox protein SIX2-like isoform 1 [Anolis
           carolinensis]
          Length = 287

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFS HNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|37955422|gb|AAO83592.1| transcription factor Six1 [Danio rerio]
          Length = 284

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 172/201 (85%), Positives = 185/201 (92%), Gaps = 1/201 (0%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAV KYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVVKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKDGSVHSFRVNIGGDSKTQ 413
           E K+   +S   N G + + Q
Sbjct: 183 EAKE-RENSENNNTGANKQNQ 202



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           ++KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VVKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|157120904|ref|XP_001659787.1| six/sine homebox transcription factors [Aedes aegypti]
 gi|108874765|gb|EAT38990.1| AAEL009170-PA [Aedes aegypti]
          Length = 397

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 169/183 (92%), Positives = 177/183 (96%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           +PSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRGNF
Sbjct: 76  MPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGNF 135

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE HQ++PHNH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 136 KELYRLLEHHQYAPHNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 195

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 196 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 255

Query: 394 QKD 396
            KD
Sbjct: 256 HKD 258



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/67 (97%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT
Sbjct: 178 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 237

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 238 TQVSNWF 244


>gi|126303909|ref|XP_001375668.1| PREDICTED: homeobox protein SIX2-like [Monodelphis domestica]
          Length = 290

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 169/183 (92%), Positives = 178/183 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|113206154|ref|NP_001038150.1| homeobox protein SIX1 [Gallus gallus]
 gi|77799783|dbj|BAE46752.1| sine oculis-related homeobox 1 homolog [Gallus gallus]
          Length = 282

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|427782593|gb|JAA56748.1| Putative sine oculis-related homeobox 2a [Rhipicephalus pulchellus]
          Length = 377

 Score =  368 bits (945), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 169/193 (87%), Positives = 180/193 (93%)

Query: 204 STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAK 263
           S    S + +LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE L KNESVLKAK
Sbjct: 8   SAGAVSSASMLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEHLQKNESVLKAK 67

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRR 323
           A+VAFHRGNFK+LYRILESH FS  +HPKLQALWLKAHY+EAE+LRGRPLGAVGKYR+RR
Sbjct: 68  ALVAFHRGNFKELYRILESHHFSAASHPKLQALWLKAHYIEAERLRGRPLGAVGKYRIRR 127

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTTTQVSNWFK
Sbjct: 128 KFPLPRTIWDGEETSYCFKEKSRNILREWYAHNPYPSPREKRELAEATGLTTTQVSNWFK 187

Query: 384 NRRQRDRAAEQKD 396
           NRRQRDRAAE KD
Sbjct: 188 NRRQRDRAAEAKD 200



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 120 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRNILREWYAHNPYPSPREKRELAEATGLTT 179

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 180 TQVSNWF 186


>gi|195123115|ref|XP_002006055.1| GI18759 [Drosophila mojavensis]
 gi|193911123|gb|EDW09990.1| GI18759 [Drosophila mojavensis]
          Length = 454

 Score =  368 bits (944), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 173/222 (77%), Positives = 190/222 (85%), Gaps = 1/222 (0%)

Query: 193 SSANITSSPNTSTSTASIS-PILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE 251
           S  +++S  +   +TA+     LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+
Sbjct: 92  SGLHLSSGGSNGGATATAGREALPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCD 151

Query: 252 KLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGR 311
           KL  NESVLKAKA+VAFHRG +K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGR
Sbjct: 152 KLQLNESVLKAKAVVAFHRGQYKELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGR 211

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 371
           PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEAT
Sbjct: 212 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEAT 271

Query: 372 GLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFRVNIGGDSKTQ 413
           GLTTTQVSNWFKNRRQRDRAAE KDGS     ++   DS+ +
Sbjct: 272 GLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEME 313



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTT
Sbjct: 216 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTT 275

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 276 TQVSNWF 282


>gi|195431178|ref|XP_002063625.1| GK21318 [Drosophila willistoni]
 gi|194159710|gb|EDW74611.1| GK21318 [Drosophila willistoni]
          Length = 443

 Score =  367 bits (943), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 180/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 119 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 178

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 179 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 238

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 239 GEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 298

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 299 HKDGSTDKQHLDSSSDSEME 318



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTT
Sbjct: 221 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTT 280

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 281 TQVSNWF 287


>gi|26327043|dbj|BAC27265.1| unnamed protein product [Mus musculus]
          Length = 284

 Score =  367 bits (943), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 177/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ER GRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERQGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|327280965|ref|XP_003225221.1| PREDICTED: homeobox protein SIX2-like isoform 2 [Anolis
           carolinensis]
          Length = 289

 Score =  367 bits (942), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFS HNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|417398566|gb|JAA46316.1| Putative transcription factor six [Desmodus rotundus]
 gi|417398568|gb|JAA46317.1| Putative transcription factor six [Desmodus rotundus]
          Length = 299

 Score =  367 bits (942), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|113206172|ref|NP_001038160.1| homeobox protein SIX2 [Gallus gallus]
 gi|77799779|dbj|BAE46750.1| sine oculis-related homeobox 2 homolog [Gallus gallus]
          Length = 287

 Score =  367 bits (941), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFS HNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|383420881|gb|AFH33654.1| homeobox protein SIX1 [Macaca mulatta]
          Length = 284

 Score =  366 bits (940), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 167/184 (90%), Positives = 177/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|195149321|ref|XP_002015606.1| GL11165 [Drosophila persimilis]
 gi|194109453|gb|EDW31496.1| GL11165 [Drosophila persimilis]
          Length = 430

 Score =  366 bits (940), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 107 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 166

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 167 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 226

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 227 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 286

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 287 HKDGSTDKQHLDSSSDSEME 306



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 209 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 268

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 269 TQVSNWF 275


>gi|391347032|ref|XP_003747769.1| PREDICTED: homeobox protein SIX1-like [Metaseiulus occidentalis]
          Length = 366

 Score =  366 bits (940), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 164/202 (81%), Positives = 184/202 (91%)

Query: 196 NITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK 255
           +++ S  T   T + +P+LP+FGFTQEQVACVCEVLQQSG++ERL RFLWSLPA E L K
Sbjct: 8   DLSQSTLTGNLTITPAPVLPTFGFTQEQVACVCEVLQQSGDVERLARFLWSLPALETLQK 67

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           NESVLKAKA+VAFHRGNFKDLY+ILESH F+P  HPKLQALWLKAHY+EAE++RGRPLGA
Sbjct: 68  NESVLKAKALVAFHRGNFKDLYKILESHAFAPSAHPKLQALWLKAHYIEAERVRGRPLGA 127

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           VG+YR+RRKFPLPRTIWDG+ETSYCFKEKSR++LRDWY HNPYPSPREKRELAE TGLTT
Sbjct: 128 VGRYRIRRKFPLPRTIWDGDETSYCFKEKSRTILRDWYAHNPYPSPREKRELAEGTGLTT 187

Query: 376 TQVSNWFKNRRQRDRAAEQKDG 397
           TQVSNWFKNRRQRDRAAE KDG
Sbjct: 188 TQVSNWFKNRRQRDRAAETKDG 209



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + +YR+RRKFPLPRTIWDG+ETSYCFKEKSR++LRDWY HNPYPSPREKRELAE TGLTT
Sbjct: 128 VGRYRIRRKFPLPRTIWDGDETSYCFKEKSRTILRDWYAHNPYPSPREKRELAEGTGLTT 187

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 188 TQVSNWF 194


>gi|195474366|ref|XP_002089462.1| GE19124 [Drosophila yakuba]
 gi|194175563|gb|EDW89174.1| GE19124 [Drosophila yakuba]
          Length = 417

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 101 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 160

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 161 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 220

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 221 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 280

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 281 HKDGSTDKQHLDSSSDSEME 300



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 203 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 262

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 263 TQVSNWF 269


>gi|440899600|gb|ELR50881.1| Homeobox protein SIX2 [Bos grunniens mutus]
          Length = 296

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|351715382|gb|EHB18301.1| Homeobox protein SIX2 [Heterocephalus glaber]
          Length = 295

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|431912719|gb|ELK14737.1| Homeobox protein SIX2 [Pteropus alecto]
          Length = 298

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|198456038|ref|XP_001360212.2| GA10770 [Drosophila pseudoobscura pseudoobscura]
 gi|198135496|gb|EAL24786.2| GA10770 [Drosophila pseudoobscura pseudoobscura]
          Length = 425

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 105 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 164

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 165 KELYRLLEHHHFSTQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 224

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 225 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 284

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 285 HKDGSTDKQHLDSSSDSEME 304



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 207 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 266

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 267 TQVSNWF 273


>gi|345777279|ref|XP_538478.3| PREDICTED: homeobox protein SIX2 [Canis lupus familiaris]
          Length = 296

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|329664112|ref|NP_001192607.1| homeobox protein SIX2 [Bos taurus]
 gi|301753230|ref|XP_002912455.1| PREDICTED: homeobox protein SIX2-like [Ailuropoda melanoleuca]
 gi|335285560|ref|XP_003125222.2| PREDICTED: homeobox protein SIX2-like [Sus scrofa]
 gi|281352627|gb|EFB28211.1| hypothetical protein PANDA_000201 [Ailuropoda melanoleuca]
 gi|296482653|tpg|DAA24768.1| TPA: SIX homeobox 1-like [Bos taurus]
          Length = 296

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|426223735|ref|XP_004006029.1| PREDICTED: homeobox protein SIX2 [Ovis aries]
          Length = 296

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|14250808|gb|AAH08874.1| SIX homeobox 1 [Homo sapiens]
 gi|30583005|gb|AAP35746.1| sine oculis homeobox homolog 1 (Drosophila) [Homo sapiens]
 gi|60656437|gb|AAX32782.1| sine oculis homeobox-like 1 [synthetic construct]
          Length = 284

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 177/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKL GRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|30585053|gb|AAP36799.1| Homo sapiens sine oculis homeobox homolog 1 (Drosophila) [synthetic
           construct]
 gi|60653399|gb|AAX29394.1| sine oculis homeobox-like 1 [synthetic construct]
 gi|60653401|gb|AAX29395.1| sine oculis homeobox-like 1 [synthetic construct]
          Length = 285

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 177/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKL GRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLCGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|57770516|ref|NP_001009904.1| sine oculis homeobox homolog 1a [Danio rerio]
 gi|49902813|gb|AAH76015.1| Sine oculis homeobox homolog 1a [Danio rerio]
 gi|158937637|gb|ABW83199.1| homeodomain transcription factor Six1b [Danio rerio]
          Length = 283

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 179/184 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           ILPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   ILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILES+QFS HNHPK+Q LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESYQFSTHNHPKMQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|224047233|ref|XP_002196559.1| PREDICTED: homeobox protein SIX2 [Taeniopygia guttata]
          Length = 287

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFS HNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|395829589|ref|XP_003787932.1| PREDICTED: homeobox protein SIX2 [Otolemur garnettii]
          Length = 296

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|33859628|ref|NP_035510.1| homeobox protein SIX2 [Mus musculus]
 gi|300793723|ref|NP_001178837.1| homeobox protein SIX2 [Rattus norvegicus]
 gi|2851595|sp|Q62232.2|SIX2_MOUSE RecName: Full=Homeobox protein SIX2; AltName: Full=Sine oculis
           homeobox homolog 2
 gi|1542815|dbj|BAA11825.1| Six2 [Mus musculus]
 gi|45751663|gb|AAH68021.1| Six2 protein [Mus musculus]
 gi|148706661|gb|EDL38608.1| sine oculis-related homeobox 2 homolog (Drosophila) [Mus musculus]
          Length = 296

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|195332103|ref|XP_002032738.1| GM20951 [Drosophila sechellia]
 gi|194124708|gb|EDW46751.1| GM20951 [Drosophila sechellia]
          Length = 414

 Score =  365 bits (938), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 94  LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 153

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 154 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 213

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 214 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 273

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 274 HKDGSTDKQHLDSSSDSEME 293



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 196 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 255

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 256 TQVSNWF 262


>gi|321453491|gb|EFX64720.1| hypothetical protein DAPPUDRAFT_14338 [Daphnia pulex]
          Length = 183

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/183 (92%), Positives = 178/183 (97%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQSGNIERL RFLWSLPAC++LHKNESVLKAKA+VAFHR NF
Sbjct: 1   LPSFGFTQEQVACVCEVLQQSGNIERLARFLWSLPACDQLHKNESVLKAKAVVAFHRANF 60

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LY++LE+H FSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 61  KELYKLLETHPFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 120

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 121 GEETSYCFKEKSRSVLRDWYGHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 180

Query: 394 QKD 396
            KD
Sbjct: 181 HKD 183



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKRELAEATGLTT
Sbjct: 103 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYGHNPYPSPREKRELAEATGLTT 162

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 163 TQVSNWFKN 171


>gi|348574664|ref|XP_003473110.1| PREDICTED: homeobox protein SIX2-like [Cavia porcellus]
          Length = 298

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|121483816|gb|ABM54202.1| SIX1 [Pan paniscus]
 gi|121503148|gb|ABM55121.1| SIX1 [Macaca mulatta]
 gi|122053820|gb|ABM65889.1| SIX1 [Ateles geoffroyi]
 gi|122938172|gb|ABM68940.1| SIX1 [Lemur catta]
 gi|124013513|gb|ABM88001.1| SIX1 [Macaca nemestrina]
 gi|124054118|gb|ABM89245.1| SIX1 [Pongo pygmaeus]
 gi|124111098|gb|ABM91925.1| SIX1 [Pan troglodytes]
          Length = 186

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 166 TQVSNWFKN 174


>gi|426335416|ref|XP_004029218.1| PREDICTED: homeobox protein SIX2 [Gorilla gorilla gorilla]
          Length = 291

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 178/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|194754657|ref|XP_001959611.1| GF12955 [Drosophila ananassae]
 gi|190620909|gb|EDV36433.1| GF12955 [Drosophila ananassae]
          Length = 419

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 98  LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 157

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 158 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 217

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 218 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 277

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 278 HKDGSTDKQHLDSSSDSEME 297



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 200 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 259

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 260 TQVSNWF 266


>gi|195025510|ref|XP_001986073.1| GH21164 [Drosophila grimshawi]
 gi|193902073|gb|EDW00940.1| GH21164 [Drosophila grimshawi]
          Length = 466

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 180/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 115 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 174

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 175 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 234

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 235 GEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 294

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 295 HKDGSTDKQHLDSSSDSEME 314



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTT
Sbjct: 217 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTT 276

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 277 TQVSNWF 283


>gi|403269582|ref|XP_003926802.1| PREDICTED: homeobox protein SIX2 [Saimiri boliviensis boliviensis]
          Length = 291

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|297667716|ref|XP_002812116.1| PREDICTED: homeobox protein SIX2 [Pongo abelii]
          Length = 291

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|17136492|ref|NP_476733.1| sine oculis [Drosophila melanogaster]
 gi|2495294|sp|Q27350.1|SO_DROME RecName: Full=Protein sine oculis
 gi|476606|gb|AAA21800.1| homeodomain-containing protein [Drosophila melanogaster]
 gi|957248|gb|AAB34685.1| homeodomain protein required for visual system development
           [Drosophila sp.]
 gi|7304225|gb|AAF59260.1| sine oculis [Drosophila melanogaster]
 gi|116875683|gb|ABK30893.1| FI01103p [Drosophila melanogaster]
          Length = 416

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 98  LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 157

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 158 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 217

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 218 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 277

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 278 HKDGSTDKQHLDSSSDSEME 297



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 200 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 259

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 260 TQVSNWF 266


>gi|219275578|ref|NP_058628.3| homeobox protein SIX2 [Homo sapiens]
 gi|296223960|ref|XP_002757846.1| PREDICTED: homeobox protein SIX2 [Callithrix jacchus]
 gi|332227341|ref|XP_003262851.1| PREDICTED: homeobox protein SIX2 [Nomascus leucogenys]
 gi|332813069|ref|XP_515444.3| PREDICTED: homeobox protein SIX2 [Pan troglodytes]
 gi|397504224|ref|XP_003822702.1| PREDICTED: homeobox protein SIX2 [Pan paniscus]
 gi|12230598|sp|Q9NPC8.1|SIX2_HUMAN RecName: Full=Homeobox protein SIX2; AltName: Full=Sine oculis
           homeobox homolog 2
 gi|7767243|gb|AAF69031.1|AF136939_1 sine oculis homeobox homolog 2 [Homo sapiens]
 gi|7767245|gb|AAF69032.1|AF136940_1 sine oculis homeobox homolog 2 [Homo sapiens]
 gi|12744795|gb|AAK06773.1|AF323498_1 SIX2 [Homo sapiens]
 gi|13242165|gb|AAK16582.1|AF332197_1 SIX2 [Homo sapiens]
 gi|13242167|gb|AAK16583.1|AF332198_1 SIX2 [Homo sapiens]
 gi|54697062|gb|AAV38903.1| sine oculis homeobox homolog 2 (Drosophila) [Homo sapiens]
 gi|61357734|gb|AAX41436.1| sine oculis homeobox-like 2 [synthetic construct]
 gi|119620670|gb|EAX00265.1| sine oculis homeobox homolog 2 (Drosophila) [Homo sapiens]
 gi|208967416|dbj|BAG73722.1| SIX homeobox 2 [synthetic construct]
          Length = 291

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|402890752|ref|XP_003908639.1| PREDICTED: homeobox protein SIX2 [Papio anubis]
 gi|355565666|gb|EHH22095.1| hypothetical protein EGK_05293 [Macaca mulatta]
 gi|383415295|gb|AFH30861.1| homeobox protein SIX2 [Macaca mulatta]
          Length = 290

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|297265924|ref|XP_001108575.2| PREDICTED: homeobox protein SIX2-like [Macaca mulatta]
          Length = 288

 Score =  364 bits (935), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 168/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 61  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQK 395
           E K
Sbjct: 181 EAK 183



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 104 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|427779109|gb|JAA55006.1| Putative sine oculis-related homeobox 2a [Rhipicephalus pulchellus]
          Length = 321

 Score =  364 bits (935), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 169/193 (87%), Positives = 180/193 (93%)

Query: 204 STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAK 263
           S    S + +LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE L KNESVLKAK
Sbjct: 6   SAGAVSSASMLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEHLQKNESVLKAK 65

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRR 323
           A+VAFHRGNFK+LYRILESH FS  +HPKLQALWLKAHY+EAE+LRGRPLGAVGKYR+RR
Sbjct: 66  ALVAFHRGNFKELYRILESHHFSAASHPKLQALWLKAHYIEAERLRGRPLGAVGKYRIRR 125

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTTTQVSNWFK
Sbjct: 126 KFPLPRTIWDGEETSYCFKEKSRNILREWYAHNPYPSPREKRELAEATGLTTTQVSNWFK 185

Query: 384 NRRQRDRAAEQKD 396
           NRRQRDRAAE KD
Sbjct: 186 NRRQRDRAAEAKD 198



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 118 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRNILREWYAHNPYPSPREKRELAEATGLTT 177

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 178 TQVSNWF 184


>gi|194863830|ref|XP_001970635.1| GG23277 [Drosophila erecta]
 gi|190662502|gb|EDV59694.1| GG23277 [Drosophila erecta]
          Length = 422

 Score =  364 bits (935), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 181/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 103 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 162

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 163 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 222

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 223 GEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 282

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 283 HKDGSTDKQHLDSSSDSEME 302



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 205 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 264

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 265 TQVSNWF 271


>gi|195382139|ref|XP_002049788.1| GJ21783 [Drosophila virilis]
 gi|194144585|gb|EDW60981.1| GJ21783 [Drosophila virilis]
          Length = 439

 Score =  364 bits (934), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 180/200 (90%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRG +
Sbjct: 110 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQY 169

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LE H FS  NH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 170 KELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 229

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 230 GEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 289

Query: 394 QKDGSVHSFRVNIGGDSKTQ 413
            KDGS     ++   DS+ +
Sbjct: 290 HKDGSTDKQHLDSSSDSEME 309



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKR+LAEATGLTT
Sbjct: 212 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAHNPYPSPREKRDLAEATGLTT 271

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 272 TQVSNWF 278


>gi|149481406|ref|XP_001505983.1| PREDICTED: homeobox protein SIX2-like [Ornithorhynchus anatinus]
          Length = 285

 Score =  364 bits (934), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 166/184 (90%), Positives = 177/184 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   LLPTFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILE HQFSP NHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILEGHQFSPPNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/99 (71%), Positives = 78/99 (78%), Gaps = 8/99 (8%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWFS-------SANITSSPNTSTSTASISPILPSF 217
           TQVSNWF        +A      NT  ST S +P++PS 
Sbjct: 166 TQVSNWFKNRRQRDRAAEAKERENTENST-SHNPLVPSL 203


>gi|340713881|ref|XP_003395463.1| PREDICTED: hypothetical protein LOC100649208 [Bombus terrestris]
          Length = 509

 Score =  363 bits (933), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 168/203 (82%), Positives = 185/203 (91%), Gaps = 6/203 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+G++ERLGRFLWSLPAC +LH++ESVLKAKA+VAFHRG+F
Sbjct: 80  LPSFGFTQEQVACVCEVLQQAGSVERLGRFLWSLPACTRLHRHESVLKAKAIVAFHRGHF 139

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYRILESH FSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 140 KELYRILESHTFSPHNHQKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 199

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 200 GEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAE 259

Query: 394 ---QKDGSVHSFRVNIGGDSKTQ 413
              Q++   H   +   GDS ++
Sbjct: 260 HSGQREDKTHGGGL---GDSSSE 279



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 182 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|383415293|gb|AFH30860.1| homeobox protein SIX2 [Macaca mulatta]
          Length = 290

 Score =  363 bits (932), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 167/183 (91%), Positives = 177/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|18645178|gb|AAH24033.1| SIX homeobox 2 [Homo sapiens]
          Length = 291

 Score =  363 bits (931), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 167/183 (91%), Positives = 176/183 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSRSVLR+WY HNPYPSPREKREL EATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELTEATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQK 395
           E K
Sbjct: 183 EAK 185



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKREL EATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELTEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|192455656|ref|NP_001122206.1| sine oculis-related homeobox 2b [Danio rerio]
 gi|190338284|gb|AAI63151.1| Similar to sine oculis homeobox homolog 2.1 [Danio rerio]
 gi|190339966|gb|AAI63156.1| Similar to sine oculis homeobox homolog 2.1 [Danio rerio]
          Length = 285

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 165/182 (90%), Positives = 177/182 (97%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P+FGFTQEQVACVCEVLQQ G+IERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF+
Sbjct: 5   PTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY++LESHQFSPHNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWDG
Sbjct: 65  ELYKVLESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           EETSYCFKEKSR VL++WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 
Sbjct: 125 EETSYCFKEKSRCVLKEWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query: 395 KD 396
           K+
Sbjct: 185 KE 186



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSR VL++WYTHNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRCVLKEWYTHNPYPSPREKRELAEATGLTT 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|13022007|gb|AAK11607.1|AF323957_1 homeobox protein SIX1 [Rattus norvegicus]
          Length = 272

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 166/180 (92%), Positives = 174/180 (96%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           FGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++L
Sbjct: 1   FGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFREL 60

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE
Sbjct: 61  YKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 120

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 121 TSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 180



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 100 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 159

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 160 TQVSNWF 166


>gi|157703442|gb|ABV68546.1| sine oculis [Tribolium castaneum]
          Length = 181

 Score =  362 bits (928), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 166/180 (92%), Positives = 176/180 (97%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           FGFTQEQVACVCEVLQQ+GN+ERLGRFLWSLPAC+KLH NESVLKAKA+VAFHRGNFK+L
Sbjct: 1   FGFTQEQVACVCEVLQQAGNVERLGRFLWSLPACDKLHNNESVLKAKAIVAFHRGNFKEL 60

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y+ILESHQFSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWDGEE
Sbjct: 61  YKILESHQFSPHNHAKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 120

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+A GLTTTQVSNWFKNRRQRDRAAE KD
Sbjct: 121 TSYCFKEKSRSVLRDWYSHNPYPSPREKRELADAAGLTTTQVSNWFKNRRQRDRAAEHKD 180



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKRELA+A GLTT
Sbjct: 100 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRELADAAGLTT 159

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 160 TQVSNWFKN 168


>gi|13242163|gb|AAK16581.1|AF332196_1 SIX2, partial [Homo sapiens]
          Length = 287

 Score =  361 bits (927), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 167/181 (92%), Positives = 175/181 (96%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF+
Sbjct: 1   PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 60

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWDG
Sbjct: 61  ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 120

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           EETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 
Sbjct: 121 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 180

Query: 395 K 395
           K
Sbjct: 181 K 181



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 102 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 161

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 162 TQVSNWF 168


>gi|307205681|gb|EFN83943.1| Homeobox protein SIX1 [Harpegnathos saltator]
          Length = 750

 Score =  360 bits (925), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 170/221 (76%), Positives = 190/221 (85%), Gaps = 6/221 (2%)

Query: 181 TGLTTTQVSNWFSSANITS---SPN---TSTSTASISPILPSFGFTQEQVACVCEVLQQS 234
           TG ++  V N ++     +   SP     S++  S    LPSFGFTQEQVACVCEVLQQ+
Sbjct: 530 TGHSSGSVENAYTPGTTGAASYSPQDSPASSAGGSGKGQLPSFGFTQEQVACVCEVLQQA 589

Query: 235 GNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQ 294
           G++ERL RFLWSLPAC +LH++ESVLKAKA+VAFHRG FK+LYRILESH FSP+NHPKLQ
Sbjct: 590 GSVERLSRFLWSLPACTRLHRHESVLKAKAIVAFHRGQFKELYRILESHTFSPNNHPKLQ 649

Query: 295 ALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT 354
           ALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 
Sbjct: 650 ALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYA 709

Query: 355 HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
            NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE +
Sbjct: 710 TNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAEHR 750



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 671 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 730

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 731 TQVSNWF 737


>gi|332030148|gb|EGI69942.1| Protein sine oculis [Acromyrmex echinatior]
          Length = 355

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 164/195 (84%), Positives = 183/195 (93%)

Query: 204 STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAK 263
           S++  S +  LPSFGFTQ+QVACVCEVLQQ+G++ERL RFLWSLPAC +LH++ESVLKAK
Sbjct: 76  SSAGGSGNGQLPSFGFTQDQVACVCEVLQQAGSVERLSRFLWSLPACTRLHRHESVLKAK 135

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRR 323
           A+VAFHRG FK+LYRILESH F+P+NHPKLQALWLKAHY+EAE+LRGRPLGAVGKYRVRR
Sbjct: 136 AIVAFHRGQFKELYRILESHTFNPNNHPKLQALWLKAHYIEAERLRGRPLGAVGKYRVRR 195

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSRSVLRDWY +NPYPSPREKRELAE+TGLTTTQVSNWFK
Sbjct: 196 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYANNPYPSPREKRELAESTGLTTTQVSNWFK 255

Query: 384 NRRQRDRAAEQKDGS 398
           NRRQRDRAAE + GS
Sbjct: 256 NRRQRDRAAEHRTGS 270



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY +NPYPSPREKRELAE+TGLTT
Sbjct: 188 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYANNPYPSPREKRELAESTGLTT 247

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 248 TQVSNWF 254


>gi|791086|emb|CAA56584.1| six2 [Mus musculus]
          Length = 321

 Score =  358 bits (918), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 165/179 (92%), Positives = 172/179 (96%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF++L
Sbjct: 32  FGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFREL 91

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLG VGKYRVRRKFPLPR+IWDGEE
Sbjct: 92  YKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGRVGKYRVRRKFPLPRSIWDGEE 151

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           TSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K
Sbjct: 152 TSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAK 210



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 131 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 190

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 191 TQVSNWF 197


>gi|327286757|ref|XP_003228096.1| PREDICTED: homeobox protein SIX1-like [Anolis carolinensis]
          Length = 433

 Score =  357 bits (916), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 166/181 (91%), Positives = 176/181 (97%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           +FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPAC++LHKNESVLKAKA+VAFH GNF++
Sbjct: 161 NFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACDRLHKNESVLKAKAVVAFHWGNFRE 220

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY+ILES+QFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE
Sbjct: 221 LYKILESYQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 280

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K
Sbjct: 281 ETSYCFKEKSRSVLREWYLHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAETK 340

Query: 396 D 396
           +
Sbjct: 341 E 341



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 261 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLREWYLHNPYPSPREKRELAEATGLTT 320

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 321 TQVSNWF 327


>gi|307186132|gb|EFN71857.1| Homeobox protein SIX1 [Camponotus floridanus]
          Length = 268

 Score =  357 bits (915), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 173/223 (77%), Positives = 192/223 (86%), Gaps = 8/223 (3%)

Query: 181 TGLTTTQ--VSNWFSSANITS---SPN---TSTSTASISPILPSFGFTQEQVACVCEVLQ 232
           TG TTT   V N ++     +   SP     S++  S +  LPSFGFTQEQVACVCEVLQ
Sbjct: 46  TGHTTTSGSVENAYTPGTTGAASYSPQDSPASSAGGSGNGQLPSFGFTQEQVACVCEVLQ 105

Query: 233 QSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPK 292
           Q+G++ERL RFLWSLPAC +LH++ESVLKAKA+VAFHRG FK+LYRILESH FSP+NHPK
Sbjct: 106 QAGSVERLSRFLWSLPACTRLHRHESVLKAKAIVAFHRGQFKELYRILESHTFSPNNHPK 165

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW
Sbjct: 166 LQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 225

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           Y  NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE +
Sbjct: 226 YATNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAEHR 268



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 189 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 248

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 249 TQVSNWF 255


>gi|383852700|ref|XP_003701863.1| PREDICTED: protein sine oculis-like [Megachile rotundata]
          Length = 285

 Score =  357 bits (915), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 163/182 (89%), Positives = 177/182 (97%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+G++ERLGRFLWSLPAC +LH++ESVLKAKA+VAFHRG+F
Sbjct: 79  LPSFGFTQEQVACVCEVLQQAGSVERLGRFLWSLPACTRLHRHESVLKAKAIVAFHRGHF 138

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYRILESH FSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 139 KELYRILESHTFSPHNHQKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 198

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY+ NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 199 GEETSYCFKEKSRSVLRDWYSTNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAE 258

Query: 394 QK 395
            +
Sbjct: 259 HR 260



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+ NPYPSPREKRELAE+TGLTT
Sbjct: 181 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSTNPYPSPREKRELAESTGLTT 240

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 241 TQVSNWF 247


>gi|380025414|ref|XP_003696469.1| PREDICTED: homeobox protein SIX1-like [Apis florea]
          Length = 304

 Score =  355 bits (912), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 164/185 (88%), Positives = 177/185 (95%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+G++ERLGRFLWSLPAC +LH++ESVLKAKA+VAFHRG+F
Sbjct: 80  LPSFGFTQEQVACVCEVLQQAGSVERLGRFLWSLPACTRLHRHESVLKAKAIVAFHRGHF 139

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYRILESH FSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 140 KELYRILESHTFSPHNHQKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 199

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 200 GEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAE 259

Query: 394 QKDGS 398
            +  S
Sbjct: 260 HRSKS 264



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 182 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|357604859|gb|EHJ64364.1| hypothetical protein KGM_10223 [Danaus plexippus]
          Length = 246

 Score =  355 bits (911), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 166/183 (90%), Positives = 173/183 (94%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLPACE+LH +ESVLKAKAMVAFHRGNF
Sbjct: 19  LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNF 78

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYR+LESH FS HNH KLQ LWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 79  KELYRLLESHNFSAHNHAKLQNLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 138

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY HNPYPSPREKRELAE TGLTT QVSNWFKNRRQRDR AE
Sbjct: 139 GEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 198

Query: 394 QKD 396
            KD
Sbjct: 199 HKD 201



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 64/69 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY HNPYPSPREKRELAE TGLTT
Sbjct: 121 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTT 180

Query: 186 TQVSNWFSS 194
            QVSNWF +
Sbjct: 181 VQVSNWFKN 189


>gi|350418922|ref|XP_003492012.1| PREDICTED: homeobox protein SIX2-like, partial [Bombus impatiens]
          Length = 261

 Score =  355 bits (910), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 163/181 (90%), Positives = 175/181 (96%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LPSFGFTQEQVACVCEVLQQ+G++ERLGRFLWSLPAC +LH++ESVLKAKA+VAFHRG+F
Sbjct: 81  LPSFGFTQEQVACVCEVLQQAGSVERLGRFLWSLPACTRLHRHESVLKAKAIVAFHRGHF 140

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LYRILESH FSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 141 KELYRILESHTFSPHNHQKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 200

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 201 GEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAE 260

Query: 394 Q 394
            
Sbjct: 261 H 261



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 183 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|118343982|ref|NP_001071814.1| transcription factor protein [Ciona intestinalis]
 gi|70571146|dbj|BAE06687.1| transcription factor protein [Ciona intestinalis]
          Length = 436

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/216 (77%), Positives = 183/216 (84%), Gaps = 3/216 (1%)

Query: 185 TTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFL 244
           +TQ++    S     +  T   T    P L SFGFTQEQVACVCEVLQQ GNIERL RFL
Sbjct: 41  STQMNPGMMSGYGGMTGPTQPPTTQNGPGL-SFGFTQEQVACVCEVLQQGGNIERLARFL 99

Query: 245 WSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVE 304
           WSLP CE LHKNESVLKAKA+VAFHRGNF++LY+I+E++ FS HNH KLQ LWLK+HY+E
Sbjct: 100 WSLPGCEHLHKNESVLKAKAVVAFHRGNFRELYKIIENNNFSEHNHAKLQQLWLKSHYIE 159

Query: 305 AEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREK 364
           AEKLRGRPLGAVGKYRVRRKFPLPR+IWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREK
Sbjct: 160 AEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREK 219

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDRAAEQK--DGS 398
           RELAE TGLT TQVSNWFKNRRQRDRAAE K  DGS
Sbjct: 220 RELAEGTGLTVTQVSNWFKNRRQRDRAAEAKERDGS 255



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAE TGLT 
Sbjct: 171 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEGTGLTV 230

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 231 TQVSNWF 237


>gi|144369387|dbj|BAF56234.1| Six-C [Coeloplana willeyi]
          Length = 389

 Score =  350 bits (897), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 158/188 (84%), Positives = 176/188 (93%)

Query: 209 SISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAF 268
           S+  + PS+GFTQEQVACVCEVL Q GN+ERL RFLWSLP+C+ LHKNESVLKAKA+VAF
Sbjct: 100 SVQGLNPSYGFTQEQVACVCEVLSQGGNMERLARFLWSLPSCDHLHKNESVLKAKAVVAF 159

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           HRGNFK+LY+ILE++ FS +NHPKLQ++WLKAHY+EAEKLRGR LGAVGKYRVR+KFPLP
Sbjct: 160 HRGNFKELYQILENNSFSANNHPKLQSIWLKAHYMEAEKLRGRSLGAVGKYRVRKKFPLP 219

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           RTIWDG+ETSYCFKEKSR+VLRDWY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR
Sbjct: 220 RTIWDGDETSYCFKEKSRTVLRDWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 279

Query: 389 DRAAEQKD 396
           DRAAE KD
Sbjct: 280 DRAAESKD 287



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDG+ETSYCFKEKSR+VLRDWY HNPYPSPREKRELAEATGLTT
Sbjct: 207 VGKYRVRKKFPLPRTIWDGDETSYCFKEKSRTVLRDWYAHNPYPSPREKRELAEATGLTT 266

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 267 TQVSNWF 273


>gi|328784346|ref|XP_396811.4| PREDICTED: homeobox protein SIX1-like [Apis mellifera]
          Length = 271

 Score =  349 bits (895), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 160/178 (89%), Positives = 172/178 (96%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           FGFTQEQVACVCEVLQQ+G++ERLGRFLWSLPAC +LH++ESVLKAKA+VAFHRG+FK+L
Sbjct: 83  FGFTQEQVACVCEVLQQAGSVERLGRFLWSLPACTRLHRHESVLKAKAIVAFHRGHFKEL 142

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           YRILESH FSPHNH KLQALWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWDGEE
Sbjct: 143 YRILESHTFSPHNHQKLQALWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 202

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           TSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE 
Sbjct: 203 TSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAEH 260



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTT
Sbjct: 182 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTT 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|339239153|ref|XP_003381131.1| homeobox protein SIX2 [Trichinella spiralis]
 gi|316975863|gb|EFV59253.1| homeobox protein SIX2 [Trichinella spiralis]
          Length = 413

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 158/183 (86%), Positives = 171/183 (93%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
            PS     EQVACVCEVLQQSGN++RL RFLWSLP CE+LH NE+VL+AKA+VAFH GNF
Sbjct: 86  FPSPKHPTEQVACVCEVLQQSGNVQRLARFLWSLPVCEELHNNETVLRAKALVAFHNGNF 145

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K++Y++LESHQFSP NHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 146 KEMYQVLESHQFSPENHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 205

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRS+LRDWYTHNPYPSPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 206 GEETSYCFKEKSRSILRDWYTHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAE 265

Query: 394 QKD 396
            KD
Sbjct: 266 AKD 268



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRS+LRDWYTHNPYPSPREKR+LAEATGLTT
Sbjct: 188 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSILRDWYTHNPYPSPREKRDLAEATGLTT 247

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 248 TQVSNWF 254


>gi|343098396|tpg|DAA34948.1| TPA_inf: six-type transcription factor 1/2 [Capitella teleta]
          Length = 175

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 163/175 (93%), Positives = 169/175 (96%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FTQEQVACVCEVLQ SGNIERL RFLWSLPACE LHKNESVLKAKA+VAFHRGNFK+LY+
Sbjct: 1   FTQEQVACVCEVLQNSGNIERLARFLWSLPACEHLHKNESVLKAKAVVAFHRGNFKELYK 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILES  FSPHNHPKLQALWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS
Sbjct: 61  ILESQTFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 121 YCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 175



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 98  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRTVLREWYAHNPYPSPREKRELAEATGLTT 157

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 158 TQVSNWFKN 166


>gi|444705908|gb|ELW47286.1| Homeobox protein SIX2 [Tupaia chinensis]
          Length = 358

 Score =  348 bits (893), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 162/183 (88%), Positives = 171/183 (93%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           L S     +QVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF
Sbjct: 66  LASPAVGAKQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNF 125

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           ++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWD
Sbjct: 126 RELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWD 185

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 186 GEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 245

Query: 394 QKD 396
            K+
Sbjct: 246 AKE 248



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 168 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 227

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 228 TQVSNWF 234


>gi|429836920|dbj|BAM72550.1| homeobox protein SIX2, partial [Nymphicus hollandicus]
          Length = 266

 Score =  347 bits (890), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 161/174 (92%), Positives = 168/174 (96%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           EQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY+ILE
Sbjct: 1   EQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKILE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           SHQFS HNHPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWDGEETSYCF
Sbjct: 61  SHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           KEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K
Sbjct: 121 KEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAK 174



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 95  VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 154

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 155 TQVSNWF 161


>gi|791084|emb|CAA56585.1| six1 [Mus musculus]
          Length = 273

 Score =  347 bits (889), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 159/174 (91%), Positives = 167/174 (95%)

Query: 223 QVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           Q ACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++LY+ILES
Sbjct: 2   QGACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILES 61

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           HQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK
Sbjct: 62  HQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 121

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           EKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 122 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 175



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 95  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 154

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 155 TQVSNWF 161


>gi|144369366|dbj|BAF56229.1| Six-C [Anthopleura japonica]
          Length = 268

 Score =  346 bits (888), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 158/183 (86%), Positives = 172/183 (93%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSF FT EQVACVCEVLQQSG+IERLGRFLWSLP CE + KNESVLKAKA+VAFH GN
Sbjct: 1   MLPSFSFTPEQVACVCEVLQQSGDIERLGRFLWSLPECETIQKNESVLKAKAIVAFHNGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LYR+LES  FSP +HPKLQ+LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FQELYRLLESSNFSPASHPKLQSLWLKAHYLEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRNILREWYSHNPYPSPREKRELAENTGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQK 395
           E K
Sbjct: 181 EAK 183



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRNILREWYSHNPYPSPREKRELAENTGLTT 163

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 164 TQVSNWF 170


>gi|390632768|gb|AFM29908.1| homeobox protein SIX1, partial [Xenopus laevis]
          Length = 260

 Score =  346 bits (887), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 159/173 (91%), Positives = 167/173 (96%)

Query: 224 VACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESH 283
           VACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++LY+ILESH
Sbjct: 1   VACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESH 60

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
           QFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE
Sbjct: 61  QFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 120

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           KSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 121 KSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 173



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 93  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 152

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 153 TQVSNWF 159


>gi|343098386|tpg|DAA34943.1| TPA_inf: six-type transcription factor 1/2b [Helobdella robusta]
          Length = 175

 Score =  344 bits (882), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 160/175 (91%), Positives = 168/175 (96%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FTQEQVACVCEVLQ SGN+ERL RFLWSLPAC+ LHKNESVLKAKA+V+FHRGNFK+LYR
Sbjct: 1   FTQEQVACVCEVLQNSGNVERLARFLWSLPACDHLHKNESVLKAKAVVSFHRGNFKELYR 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILESHQFSPHNH KLQ+LWLK HY EAEK RGRPLGAVGKYRVRRKFPLPRTIWDGEETS
Sbjct: 61  ILESHQFSPHNHNKLQSLWLKGHYTEAEKQRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCFKEKSR+VLRDWY+HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 121 YCFKEKSRTVLRDWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 175



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 67/69 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWY+HNPYPSPREKRELAEATGLTT
Sbjct: 98  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRTVLRDWYSHNPYPSPREKRELAEATGLTT 157

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 158 TQVSNWFKN 166


>gi|308220152|gb|ADO22648.1| SIX class homeobox transcription factor SIX41 [Mnemiopsis leidyi]
          Length = 456

 Score =  343 bits (880), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 155/188 (82%), Positives = 173/188 (92%)

Query: 209 SISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAF 268
           ++  + PS+GFTQEQVACVCEVL Q G++ERL RFLWSLPAC+ LHKNESVLKAKA+VAF
Sbjct: 110 TVQGLNPSYGFTQEQVACVCEVLSQGGSMERLARFLWSLPACDHLHKNESVLKAKAVVAF 169

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           HRGNFK+LYRILE++ FSP +H KLQ +WLKAHY+EAEKLRGR LGAVGKYRVR+KFPLP
Sbjct: 170 HRGNFKELYRILENNNFSPSSHTKLQNIWLKAHYMEAEKLRGRSLGAVGKYRVRKKFPLP 229

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           RTIWDG+ETSYCFKEKSR+VLRDWY HNPYPSPREKRELAE TGLTTTQVSNWFKNRRQR
Sbjct: 230 RTIWDGDETSYCFKEKSRTVLRDWYAHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQR 289

Query: 389 DRAAEQKD 396
           DRAAE K+
Sbjct: 290 DRAAESKE 297



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDG+ETSYCFKEKSR+VLRDWY HNPYPSPREKRELAE TGLTT
Sbjct: 217 VGKYRVRKKFPLPRTIWDGDETSYCFKEKSRTVLRDWYAHNPYPSPREKRELAEGTGLTT 276

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 277 TQVSNWF 283


>gi|121221911|gb|ABM47595.1| SIX1 [Saguinus labiatus]
          Length = 186

 Score =  343 bits (879), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/184 (90%), Positives = 176/184 (95%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKREL  ATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELXXATGLTTTQVSNWFKNRRQRDRAA 182

Query: 393 EQKD 396
           E K+
Sbjct: 183 EAKE 186



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 63/69 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKREL  ATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELXXATGLTT 165

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 166 TQVSNWFKN 174


>gi|313226211|emb|CBY21354.1| unnamed protein product [Oikopleura dioica]
          Length = 398

 Score =  340 bits (871), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 153/183 (83%), Positives = 168/183 (91%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S G T EQ++CVC+VLQ+S  I+RL RF+WSLP CE L K+ESVLKA+A+V FHRGNF+D
Sbjct: 58  SAGLTIEQISCVCDVLQKSSAIDRLSRFIWSLPNCEVLQKHESVLKARAVVNFHRGNFRD 117

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY++LESH FSP NH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE
Sbjct: 118 LYKVLESHTFSPENHSKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 177

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT TQVSNWFKNRRQRDRAAEQK
Sbjct: 178 ETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTVTQVSNWFKNRRQRDRAAEQK 237

Query: 396 DGS 398
           DG+
Sbjct: 238 DGN 240



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT 
Sbjct: 158 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTV 217

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 218 TQVSNWF 224


>gi|313240338|emb|CBY32680.1| unnamed protein product [Oikopleura dioica]
          Length = 398

 Score =  340 bits (871), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 153/183 (83%), Positives = 168/183 (91%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S G T EQ++CVC+VLQ+S  I+RL RF+WSLP CE L K+ESVLKA+A+V FHRGNF+D
Sbjct: 58  SAGLTIEQISCVCDVLQKSSAIDRLSRFIWSLPNCEVLQKHESVLKARAVVNFHRGNFRD 117

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY++LESH FSP NH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE
Sbjct: 118 LYKVLESHTFSPENHSKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 177

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT TQVSNWFKNRRQRDRAAEQK
Sbjct: 178 ETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTVTQVSNWFKNRRQRDRAAEQK 237

Query: 396 DGS 398
           DG+
Sbjct: 238 DGN 240



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT 
Sbjct: 158 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTV 217

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 218 TQVSNWF 224


>gi|71068436|gb|AAZ23140.1| Six1/2 [Oikopleura dioica]
          Length = 410

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 152/183 (83%), Positives = 168/183 (91%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S G T EQ++CVC+VLQ+S  I+RL RF+WSLP CE L K+E+VLKA+A+V FHRGNF+D
Sbjct: 64  SAGLTIEQISCVCDVLQKSSAIDRLSRFIWSLPNCEVLQKHEAVLKARAVVNFHRGNFRD 123

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY++LESH FSP NH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE
Sbjct: 124 LYKVLESHTFSPENHSKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 183

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT TQVSNWFKNRRQRDRAAEQK
Sbjct: 184 ETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTVTQVSNWFKNRRQRDRAAEQK 243

Query: 396 DGS 398
           DG+
Sbjct: 244 DGN 246



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT 
Sbjct: 164 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTV 223

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 224 TQVSNWF 230


>gi|71068438|gb|AAZ23141.1| Six1/2 [Oikopleura dioica]
          Length = 410

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 152/183 (83%), Positives = 168/183 (91%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S G T EQ++CVC+VLQ+S  I+RL RF+WSLP CE L K+E+VLKA+A+V FHRGNF+D
Sbjct: 64  SAGLTIEQISCVCDVLQKSSAIDRLSRFIWSLPNCEVLQKHEAVLKARAVVNFHRGNFRD 123

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY++LESH FSP NH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE
Sbjct: 124 LYKVLESHTFSPENHSKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 183

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT TQVSNWFKNRRQRDRAAEQK
Sbjct: 184 ETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTVTQVSNWFKNRRQRDRAAEQK 243

Query: 396 DGS 398
           DG+
Sbjct: 244 DGN 246



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT 
Sbjct: 164 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTV 223

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 224 TQVSNWF 230


>gi|156364599|ref|XP_001626434.1| predicted protein [Nematostella vectensis]
 gi|156213310|gb|EDO34334.1| predicted protein [Nematostella vectensis]
          Length = 185

 Score =  338 bits (867), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 156/183 (85%), Positives = 173/183 (94%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSF FT EQVACVCEVLQQSG+IERLGRFLWSLP CE + KNESVLKAKA+V+FH+ N
Sbjct: 1   MLPSFSFTPEQVACVCEVLQQSGDIERLGRFLWSLPECETIQKNESVLKAKAIVSFHQQN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LYRILE++ FSP+ HPKLQ+LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  FQELYRILENNNFSPNAHPKLQSLWLKAHYMEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 120

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQVSNWFKNRRQRDRAA
Sbjct: 121 DGEETSYCFKEKSRNILREWYSHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDRAA 180

Query: 393 EQK 395
           E K
Sbjct: 181 EAK 183



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTT
Sbjct: 104 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRNILREWYSHNPYPSPREKRELAEGTGLTT 163

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 164 TQVSNWFKN 172


>gi|11863177|gb|AAD39895.2|AF108810_1 homeobox protein SIX2 [Xenopus laevis]
          Length = 168

 Score =  337 bits (864), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 157/168 (93%), Positives = 163/168 (97%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY+
Sbjct: 1   FTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYK 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILE HQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR+IWDGEETS
Sbjct: 61  ILEGHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           YCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRR
Sbjct: 121 YCFKEKSRSVLREWYGHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 168



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 98  VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYGHNPYPSPREKRELAEATGLTT 157

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 158 TQVSNWFKN 166


>gi|449278505|gb|EMC86327.1| Homeobox protein SIX1 [Columba livia]
          Length = 270

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/184 (85%), Positives = 167/184 (90%), Gaps = 12/184 (6%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEETSYCFKEKSR VLR+W            RELAEATGLTTTQVSNWFKNRRQRDRAA
Sbjct: 123 DGEETSYCFKEKSRGVLREW------------RELAEATGLTTTQVSNWFKNRRQRDRAA 170

Query: 393 EQKD 396
           E K+
Sbjct: 171 EAKE 174



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 53/67 (79%), Gaps = 12/67 (17%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+W            RELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREW------------RELAEATGLTT 153

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 154 TQVSNWF 160


>gi|340375686|ref|XP_003386365.1| PREDICTED: hypothetical protein LOC100639860 [Amphimedon
           queenslandica]
          Length = 457

 Score =  335 bits (858), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 148/189 (78%), Positives = 173/189 (91%)

Query: 207 TASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMV 266
           TA+++    ++G +QEQVACVC+VLQQSGNIERL RFLWSLPACE++ KNESVLKAKA++
Sbjct: 17  TAAMAIPYNAYGLSQEQVACVCDVLQQSGNIERLARFLWSLPACEQIQKNESVLKAKALI 76

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH+GNF++LYRI+E++ FSP +HPK+Q LWL+AHY+EAE+LRG+PLGAVGKYR+RRKFP
Sbjct: 77  AFHQGNFQELYRIIETNNFSPDSHPKMQQLWLQAHYIEAERLRGKPLGAVGKYRIRRKFP 136

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGEETSYCFKEKSR VLR WYT N YPSPREKR+LAE TGLTTTQVSNWFKNRR
Sbjct: 137 LPRTIWDGEETSYCFKEKSRVVLRQWYTKNAYPSPREKRQLAEQTGLTTTQVSNWFKNRR 196

Query: 387 QRDRAAEQK 395
           QRDRAAE K
Sbjct: 197 QRDRAAETK 205



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 61/67 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR VLR WYT N YPSPREKR+LAE TGLTT
Sbjct: 126 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRVVLRQWYTKNAYPSPREKRQLAEQTGLTT 185

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 186 TQVSNWF 192


>gi|299906605|gb|ADJ58017.1| Six1/2 [Chalinula loosanoffi]
          Length = 446

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 146/187 (78%), Positives = 171/187 (91%)

Query: 207 TASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMV 266
           TA+++    ++G +QEQVACVC+VLQQSGNIERL RFLWSLPACE++ KNESVLKAKA++
Sbjct: 17  TAAMAIPYNAYGLSQEQVACVCDVLQQSGNIERLARFLWSLPACEQIQKNESVLKAKALI 76

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH+GNF +LYRI+E + F+P +HPK+Q LWL+AHY+EAE+LRG+PLGAVGKYR+RRKFP
Sbjct: 77  AFHQGNFPELYRIIELNSFTPESHPKMQQLWLQAHYIEAERLRGKPLGAVGKYRIRRKFP 136

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGEETSYCFKEKSR VLR WYT NPYPSPREKR+LAE TGLTTTQVSNWFKNRR
Sbjct: 137 LPRTIWDGEETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLAEQTGLTTTQVSNWFKNRR 196

Query: 387 QRDRAAE 393
           QRDRA+E
Sbjct: 197 QRDRASE 203



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR VLR WYT NPYPSPREKR+LAE TGLTT
Sbjct: 126 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLAEQTGLTT 185

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 186 TQVSNWF 192


>gi|343098388|tpg|DAA34944.1| TPA_inf: six-type transcription factor 1/2c [Helobdella robusta]
          Length = 175

 Score =  330 bits (847), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 151/175 (86%), Positives = 165/175 (94%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FTQEQVACVCEVLQ  GN++RL RFLWSLPAC++L K ESVLKAKA+V +HRG+FK+LYR
Sbjct: 1   FTQEQVACVCEVLQSGGNVDRLARFLWSLPACDRLQKCESVLKAKAVVCYHRGHFKELYR 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILESHQFSPH+HPK+Q LWLK HY EAEKLRGRPLGAVGKYR+RRKFPLPRTIWDGEETS
Sbjct: 61  ILESHQFSPHSHPKMQMLWLKGHYAEAEKLRGRPLGAVGKYRIRRKFPLPRTIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCFKEKSR++LRDWY HNPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 121 YCFKEKSRNLLRDWYAHNPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAE 175



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 66/69 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR++LRDWY HNPYPSPREKRELAE+TGLTT
Sbjct: 98  VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRNLLRDWYAHNPYPSPREKRELAESTGLTT 157

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 158 TQVSNWFKN 166


>gi|119601190|gb|EAW80784.1| sine oculis homeobox homolog 1 (Drosophila), isoform CRA_a [Homo
           sapiens]
          Length = 173

 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 152/165 (92%), Positives = 160/165 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQ
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQ 167



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/62 (91%), Positives = 59/62 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 165

Query: 186 TQ 187
           TQ
Sbjct: 166 TQ 167


>gi|410954713|ref|XP_003984006.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX2, partial
           [Felis catus]
          Length = 276

 Score =  330 bits (845), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 152/166 (91%), Positives = 160/166 (96%)

Query: 231 LQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNH 290
           LQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNH
Sbjct: 1   LQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNH 60

Query: 291 PKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR 350
            KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR
Sbjct: 61  AKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLR 120

Query: 351 DWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           +WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 121 EWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 166



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 86  VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 145

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 146 TQVSNWF 152


>gi|345495594|ref|XP_001600428.2| PREDICTED: hypothetical protein LOC100115806 [Nasonia vitripennis]
          Length = 530

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 150/180 (83%), Positives = 164/180 (91%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           +P F FTQEQVACVCEVLQQ+G++ERL RFLWSLP C +L KNESVLKA+A+VAFH GNF
Sbjct: 84  VPGFTFTQEQVACVCEVLQQAGSVERLARFLWSLPECARLRKNESVLKAQAVVAFHHGNF 143

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K+LY+ILES+ FS HNH KLQ LWLKAHY+EAE+LRGRPLGAVGKYRVRRKFPLPRTIWD
Sbjct: 144 KELYQILESNTFSSHNHNKLQLLWLKAHYIEAERLRGRPLGAVGKYRVRRKFPLPRTIWD 203

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSR VLR WY  NPYPSPREK+ELAE TGLTTTQVSNWFKNRRQRDRA+E
Sbjct: 204 GEETSYCFKEKSRLVLRKWYDTNPYPSPREKQELAETTGLTTTQVSNWFKNRRQRDRASE 263



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 61/67 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR WY  NPYPSPREK+ELAE TGLTT
Sbjct: 186 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRLVLRKWYDTNPYPSPREKQELAETTGLTT 245

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 246 TQVSNWF 252


>gi|144369357|dbj|BAF56226.1| Six-C [Ephydatia fluviatilis]
          Length = 451

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 143/180 (79%), Positives = 167/180 (92%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           ++G +QEQVACVC+VLQQSGNIERL RFLWSLPACE++ KNESVLKA+A++AFH+GNF +
Sbjct: 25  AYGLSQEQVACVCDVLQQSGNIERLARFLWSLPACEQIQKNESVLKARALIAFHQGNFAE 84

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LYRI+E++ F+P +HPK+Q LWL+AHY+EAE++R +PLGAVGKYR+RRKFPLPRTIWDGE
Sbjct: 85  LYRIIENNNFAPDSHPKMQQLWLQAHYIEAERVRAKPLGAVGKYRIRRKFPLPRTIWDGE 144

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR VLR WYT NPYPSPREKR+LAE TGLTTTQVSNWFKNRRQRDRAAE K
Sbjct: 145 ETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLAEQTGLTTTQVSNWFKNRRQRDRAAETK 204



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR VLR WYT NPYPSPREKR+LAE TGLTT
Sbjct: 125 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLAEQTGLTT 184

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 185 TQVSNWF 191


>gi|11863175|gb|AAD39894.2|AF108809_1 homeobox protein SIX1 [Xenopus laevis]
          Length = 165

 Score =  327 bits (839), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 151/165 (91%), Positives = 159/165 (96%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           +QVACVCE LQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++LY+ILE
Sbjct: 1   DQVACVCEALQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           SHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF
Sbjct: 61  SHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           KEKSR VLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFKNRR
Sbjct: 121 KEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 165



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 95  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 154

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 155 TQVSNWFKN 163


>gi|379045992|gb|AFC87779.1| sine oculis-1/2 [Schmidtea mediterranea]
          Length = 486

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 146/187 (78%), Positives = 163/187 (87%)

Query: 210 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFH 269
           ISP   + GFTQEQVACVCEVL+  GNI+RL  F+WSLP C++L  NESVL AKA VAFH
Sbjct: 77  ISPDSGAMGFTQEQVACVCEVLENGGNIDRLALFIWSLPPCQQLQTNESVLTAKAAVAFH 136

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
           R NFK+LYRILES+ FSPHNH KLQALWL+AHY+E EK++GR LGAV KYR+RRK+PLPR
Sbjct: 137 RQNFKELYRILESYTFSPHNHYKLQALWLQAHYIEEEKIKGRSLGAVAKYRIRRKYPLPR 196

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTTTQVSNWFKNRRQRD
Sbjct: 197 TIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTTTQVSNWFKNRRQRD 256

Query: 390 RAAEQKD 396
           RAAE KD
Sbjct: 257 RAAENKD 263



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTT
Sbjct: 183 VAKYRIRRKYPLPRTIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTT 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|30140324|emb|CAD89530.1| six1-2 protein [Dugesia japonica]
          Length = 435

 Score =  325 bits (832), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 148/194 (76%), Positives = 166/194 (85%)

Query: 203 TSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKA 262
           TST  + IS    + GFTQEQVACVCEVL+  GNI+RL  F+WSLP C++L  NESVL A
Sbjct: 17  TSTQDSVISSDSGTMGFTQEQVACVCEVLENGGNIDRLALFIWSLPPCQQLQTNESVLTA 76

Query: 263 KAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVR 322
           KA VAFHR NFK+LYRILES+ FSPHNH KLQALWL+AHY+E EK++GR LGAV KYR+R
Sbjct: 77  KAAVAFHRQNFKELYRILESYTFSPHNHYKLQALWLQAHYIEEEKIKGRSLGAVAKYRIR 136

Query: 323 RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 382
           RK+PLPRTIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTTTQVSNWF
Sbjct: 137 RKYPLPRTIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTTTQVSNWF 196

Query: 383 KNRRQRDRAAEQKD 396
           KNRRQRDRAAE KD
Sbjct: 197 KNRRQRDRAAENKD 210



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTT
Sbjct: 130 VAKYRIRRKYPLPRTIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTT 189

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 190 TQVSNWF 196


>gi|50952793|gb|AAT90323.1| sine oculis-like protein [Schistocerca americana]
          Length = 158

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/158 (96%), Positives = 157/158 (99%)

Query: 230 VLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHN 289
           VLQQSGNIERLGRFLWSLPAC+KLHK+ESVLKAKA+VAFHRGNFK+LYRILESHQFSPHN
Sbjct: 1   VLQQSGNIERLGRFLWSLPACDKLHKHESVLKAKAIVAFHRGNFKELYRILESHQFSPHN 60

Query: 290 HPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVL 349
           HPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVL
Sbjct: 61  HPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVL 120

Query: 350 RDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           R+WYTHNPYPSPREKRELAEATGLTTTQVSNW KNRRQ
Sbjct: 121 REWYTHNPYPSPREKRELAEATGLTTTQVSNWXKNRRQ 158



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/66 (95%), Positives = 65/66 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 87  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTT 146

Query: 186 TQVSNW 191
           TQVSNW
Sbjct: 147 TQVSNW 152


>gi|377685606|gb|AFB74472.1| SO, partial [Schmidtea polychroa]
          Length = 333

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 146/187 (78%), Positives = 163/187 (87%)

Query: 210 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFH 269
           ISP   + GFTQEQVACVCEVL+  GNI+RL  F+WSLP C++L  NESVL AKA VAFH
Sbjct: 3   ISPDSGTMGFTQEQVACVCEVLENGGNIDRLALFIWSLPPCQQLQTNESVLTAKAAVAFH 62

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
           R NFK+LYRILES+ FSPHNH KLQALWL+AHY+E EK++GR LGAV KYR+RRK+PLPR
Sbjct: 63  RQNFKELYRILESYTFSPHNHYKLQALWLQAHYIEEEKIKGRSLGAVAKYRIRRKYPLPR 122

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTTTQVSNWFKNRRQRD
Sbjct: 123 TIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTTTQVSNWFKNRRQRD 182

Query: 390 RAAEQKD 396
           RAAE KD
Sbjct: 183 RAAENKD 189



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 62/67 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T LTT
Sbjct: 109 VAKYRIRRKYPLPRTIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSLTT 168

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 169 TQVSNWF 175


>gi|56694862|gb|AAW23093.1| Six12b [Oikopleura dioica]
          Length = 400

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/211 (72%), Positives = 171/211 (81%), Gaps = 11/211 (5%)

Query: 192 FSSANITSSPNTS-----TSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWS 246
            S + I   PN +     TS  + +    S G T EQ++C      +S  I+RL RF+WS
Sbjct: 29  VSRSQIVVQPNPAQAHQGTSGTATAVQASSAGLTIEQISC------KSSAIDRLSRFIWS 82

Query: 247 LPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
           LP CE L K+ESVLKA+A+V FHRGNF+DLY++LESH FSP NH KLQ LWLKAHY+EAE
Sbjct: 83  LPNCEVLQKHESVLKARAVVNFHRGNFRDLYKVLESHTFSPENHSKLQQLWLKAHYIEAE 142

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRE
Sbjct: 143 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRE 202

Query: 367 LAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           LAEATGLT TQVSNWFKNRRQRDRAAEQKDG
Sbjct: 203 LAEATGLTVTQVSNWFKNRRQRDRAAEQKDG 233



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWYTHNPYPSPREKRELAEATGLT 
Sbjct: 152 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEATGLTV 211

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 212 TQVSNWF 218


>gi|7671593|emb|CAB89515.1| homeodomain transcription factor [Girardia tigrina]
          Length = 435

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/197 (74%), Positives = 165/197 (83%), Gaps = 2/197 (1%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           + GFTQEQVACVCEVL+  GNI+RL  F+WSLP C++L  NESVL AKA VAFHR NFK+
Sbjct: 30  TMGFTQEQVACVCEVLENGGNIDRLALFIWSLPPCQQLQTNESVLTAKAAVAFHRQNFKE 89

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LYRILES+ FSPHNH KLQALWL+AHY+E EK++GR LGAV KYR+RRK+PLPRTIWDGE
Sbjct: 90  LYRILESYTFSPHNHYKLQALWLQAHYIEEEKIKGRSLGAVAKYRIRRKYPLPRTIWDGE 149

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T  TTTQVSNWFKNRRQRDRAAE K
Sbjct: 150 ETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSFTTTQVSNWFKNRRQRDRAAENK 209

Query: 396 DGSVHSFRVNIGGDSKT 412
           D   H      G DS++
Sbjct: 210 DK--HDDLSASGADSES 224



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 61/67 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCFKEKSR+VLR WY HNPYPSPREK++LAE T  TT
Sbjct: 130 VAKYRIRRKYPLPRTIWDGEETSYCFKEKSRAVLRQWYLHNPYPSPREKKDLAEMTSFTT 189

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 190 TQVSNWF 196


>gi|194220763|ref|XP_001498663.2| PREDICTED: homeobox protein SIX2-like [Equus caballus]
          Length = 292

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/158 (91%), Positives = 153/158 (96%)

Query: 239 RLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWL 298
           RLGRFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNH KLQ LWL
Sbjct: 25  RLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWL 84

Query: 299 KAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY 358
           KAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPY
Sbjct: 85  KAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPY 144

Query: 359 PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 145 PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 182



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 102 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 161

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 162 TQVSNWF 168


>gi|402230886|emb|CCG27801.1| sine oculis homeobox homolog 1/2 protein, partial [Botryllus
           schlosseri]
          Length = 165

 Score =  314 bits (805), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 145/164 (88%), Positives = 154/164 (93%)

Query: 233 QSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPK 292
           Q GNIERL RFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY++LESH FS HNHPK
Sbjct: 1   QGGNIERLARFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKLLESHSFSQHNHPK 60

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR+ LR+W
Sbjct: 61  LQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAALREW 120

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           Y HNPYPSPREKRELAEATGLT TQVSNWFKNRRQRDRAAE K+
Sbjct: 121 YAHNPYPSPREKRELAEATGLTVTQVSNWFKNRRQRDRAAEAKE 164



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 64/69 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+ LR+WY HNPYPSPREKRELAEATGLT 
Sbjct: 84  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAALREWYAHNPYPSPREKRELAEATGLTV 143

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 144 TQVSNWFKN 152


>gi|402876383|ref|XP_003901951.1| PREDICTED: homeobox protein SIX1 [Papio anubis]
          Length = 370

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/154 (91%), Positives = 149/154 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           DGEETSYCFKEKSR VLR+WY HNPYPSPREKRE
Sbjct: 123 DGEETSYCFKEKSRGVLREWYAHNPYPSPREKRE 156



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/51 (90%), Positives = 48/51 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 176
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRE
Sbjct: 106 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRE 156


>gi|260766481|gb|ACX50260.1| six-type transcription factor [Helobdella sp. MS-2000]
          Length = 443

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 142/181 (78%), Positives = 163/181 (90%), Gaps = 1/181 (0%)

Query: 217 FG-FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           FG FT+EQVACVCEVLQ SGNIERL RFLWSLP+CE++ KNESVLKA+A+VAF RG+FK+
Sbjct: 205 FGCFTEEQVACVCEVLQHSGNIERLARFLWSLPSCEQIQKNESVLKARAIVAFQRGHFKE 264

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY I+E + FS HNH KLQ+LWLKAHY EAE+ RGRPLGAVGKYRVRRK PLPRTIWDGE
Sbjct: 265 LYSIVEHNHFSAHNHAKLQSLWLKAHYAEAERSRGRPLGAVGKYRVRRKHPLPRTIWDGE 324

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCF+E+SR +LR WY+ NPYPSPR+K++LAE TGLTT QVSNWFKNRRQRDRAAE++
Sbjct: 325 ETSYCFRERSRQILRTWYSANPYPSPRDKKQLAEWTGLTTIQVSNWFKNRRQRDRAAEEQ 384

Query: 396 D 396
           D
Sbjct: 385 D 385



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK PLPRTIWDGEETSYCF+E+SR +LR WY+ NPYPSPR+K++LAE TGLTT
Sbjct: 305 VGKYRVRRKHPLPRTIWDGEETSYCFRERSRQILRTWYSANPYPSPRDKKQLAEWTGLTT 364

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 365 IQVSNWF 371


>gi|348020111|gb|AEP43997.1| sine oculis-like transcription factor Six1/2A [Craspedacusta
           sowerbyi]
          Length = 352

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 137/190 (72%), Positives = 169/190 (88%)

Query: 207 TASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMV 266
           +A+I+       FT EQVACVCEVL+QSGNI+RL RFLWSLP+ + ++ NESV+KAKA+V
Sbjct: 30  SATITGQPSVVNFTPEQVACVCEVLEQSGNIDRLARFLWSLPSYDDIYMNESVVKAKAVV 89

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH+G+ ++LY ++E++ FSP +H K+Q LWL+AHY+EAEK+RGRPLGAVGKYRVRRK+P
Sbjct: 90  AFHQGSMQELYSLIENNHFSPSSHSKMQMLWLRAHYMEAEKIRGRPLGAVGKYRVRRKYP 149

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGEETSYCFKEKSR+VLRDWYT NPYPSPREK+EL+++TGL+ TQVSNWFKNRR
Sbjct: 150 LPRTIWDGEETSYCFKEKSRAVLRDWYTSNPYPSPREKKELSDSTGLSITQVSNWFKNRR 209

Query: 387 QRDRAAEQKD 396
           QRDRAAE K+
Sbjct: 210 QRDRAAEMKE 219



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK+PLPRTIWDGEETSYCFKEKSR+VLRDWYT NPYPSPREK+EL+++TGL+ 
Sbjct: 139 VGKYRVRRKYPLPRTIWDGEETSYCFKEKSRAVLRDWYTSNPYPSPREKKELSDSTGLSI 198

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 199 TQVSNWF 205


>gi|343098384|tpg|DAA34942.1| TPA_inf: six-type transcription factor 1/2a [Helobdella robusta]
          Length = 175

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 139/175 (79%), Positives = 159/175 (90%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FT+EQVACVCEVLQ SGNIERL RFLWSLP+CE++ KNESVLKA+A+V F RG+FK+LY 
Sbjct: 1   FTEEQVACVCEVLQHSGNIERLARFLWSLPSCEQIQKNESVLKARAIVTFQRGHFKELYN 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           I+E++ FSPHNH KLQ+LWLKAHY EAE+ RGRPLGAVGKYRVRRK PLPRTIWDGEETS
Sbjct: 61  IVENNHFSPHNHAKLQSLWLKAHYAEAERSRGRPLGAVGKYRVRRKHPLPRTIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCF+E+SR +LR WY+ NPYPSPR+K++LAE TGLTT QVSNWFKNRRQRDRAAE
Sbjct: 121 YCFRERSRQILRTWYSANPYPSPRDKKQLAEWTGLTTIQVSNWFKNRRQRDRAAE 175



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK PLPRTIWDGEETSYCF+E+SR +LR WY+ NPYPSPR+K++LAE TGLTT
Sbjct: 98  VGKYRVRRKHPLPRTIWDGEETSYCFRERSRQILRTWYSANPYPSPRDKKQLAEWTGLTT 157

Query: 186 TQVSNWFSS 194
            QVSNWF +
Sbjct: 158 IQVSNWFKN 166


>gi|350297793|gb|AEQ28353.1| Six1, partial [Polyodon spathula]
          Length = 151

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 139/151 (92%), Positives = 147/151 (97%)

Query: 229 EVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPH 288
           EVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA+VAFHRGNF++LY++LESHQFSPH
Sbjct: 1   EVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKLLESHQFSPH 60

Query: 289 NHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSV 348
           NHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR V
Sbjct: 61  NHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGV 120

Query: 349 LRDWYTHNPYPSPREKRELAEATGLTTTQVS 379
           LR+WYTHNPYPSPREKRELAEATGLTTTQVS
Sbjct: 121 LREWYTHNPYPSPREKRELAEATGLTTTQVS 151



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/64 (93%), Positives = 62/64 (96%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WYTHNPYPSPREKRELAEATGLTT
Sbjct: 88  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTT 147

Query: 186 TQVS 189
           TQVS
Sbjct: 148 TQVS 151


>gi|343098390|tpg|DAA34945.1| TPA_inf: six-type transcription factor 1/2d [Helobdella robusta]
          Length = 175

 Score =  298 bits (763), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/175 (78%), Positives = 151/175 (86%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+Q+QVACVCEVLQ SGN ERL RFLWSLP+C++LHK ESVL AKA V FH GN+ DLYR
Sbjct: 1   FSQDQVACVCEVLQNSGNFERLSRFLWSLPSCDQLHKQESVLVAKAFVYFHNGNYNDLYR 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LE+  FS  NH KLQ LWLKAHY EAEKLRGRPLGAVGKYR+RRK+PLP  IWDGEETS
Sbjct: 61  LLENSTFSTQNHTKLQNLWLKAHYTEAEKLRGRPLGAVGKYRIRRKYPLPANIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCFKEKSRS+L+D Y  NPYPSPREK+ LAE TGLTTTQVSNWFKNRRQRDRA E
Sbjct: 121 YCFKEKSRSILKDCYKKNPYPSPREKKNLAENTGLTTTQVSNWFKNRRQRDRANE 175



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP  IWDGEETSYCFKEKSRS+L+D Y  NPYPSPREK+ LAE TGLTT
Sbjct: 98  VGKYRIRRKYPLPANIWDGEETSYCFKEKSRSILKDCYKKNPYPSPREKKNLAENTGLTT 157

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 158 TQVSNWFKN 166


>gi|50841484|gb|AAT69263.1| homeobox protein sine oculis six 1/2 [Aurelia aurita]
          Length = 218

 Score =  298 bits (762), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 134/169 (79%), Positives = 154/169 (91%)

Query: 228 CEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
           CEVLQQ G+I+RL RFLWSLP C+++  NESVLKAKA+VAFH GNF++LY I+E+H FS 
Sbjct: 1   CEVLQQGGSIDRLARFLWSLPNCDEISNNESVLKAKAVVAFHHGNFQELYNIIENHNFSI 60

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
            +H KLQ+LWLKAHY+EAEK+RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR+
Sbjct: 61  SSHVKLQSLWLKAHYIEAEKIRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRA 120

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           +LRDWYT NPYPSPREK++LA+ TGL+TTQVSNWFKNRRQRDRA E KD
Sbjct: 121 ILRDWYTRNPYPSPREKKDLADGTGLSTTQVSNWFKNRRQRDRAREAKD 169



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR++LRDWYT NPYPSPREK++LA+ TGL+T
Sbjct: 89  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAILRDWYTRNPYPSPREKKDLADGTGLST 148

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 149 TQVSNWF 155


>gi|47155914|gb|AAT11871.1| sine oculis-like transcription factor Six1/2 [Podocoryna carnea]
          Length = 296

 Score =  297 bits (761), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 155/172 (90%)

Query: 218 GFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLY 277
            FT EQVACVCEVL+QSGNI+RL RFLWSLP  + ++ NESVL AK++VAFH+GN ++LY
Sbjct: 22  SFTPEQVACVCEVLEQSGNIDRLARFLWSLPNYDDVYANESVLVAKSVVAFHQGNLQELY 81

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            I+E++ F+ ++H KLQ LWLKAHY+EAEK+RGRPLGAVGKYRVRRK PLPRTIWDGEET
Sbjct: 82  HIIENNNFTQNSHSKLQMLWLKAHYMEAEKIRGRPLGAVGKYRVRRKHPLPRTIWDGEET 141

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           SYCFKEKSR+VLRDWYT NPYPSPREK+EL+E TGL+TTQVSNWFKNRRQRD
Sbjct: 142 SYCFKEKSRAVLRDWYTRNPYPSPREKKELSEGTGLSTTQVSNWFKNRRQRD 193



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK PLPRTIWDGEETSYCFKEKSR+VLRDWYT NPYPSPREK+EL+E TGL+T
Sbjct: 120 VGKYRVRRKHPLPRTIWDGEETSYCFKEKSRAVLRDWYTRNPYPSPREKKELSEGTGLST 179

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 180 TQVSNWF 186


>gi|5106938|gb|AAD39897.1|AF108812_1 homeobox protein SIX1, partial [Petromyzon marinus]
          Length = 149

 Score =  297 bits (760), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 138/149 (92%), Positives = 144/149 (96%)

Query: 238 ERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALW 297
           ERLG FLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNHPKLQ LW
Sbjct: 1   ERLGSFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLW 60

Query: 298 LKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNP 357
           LKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNP
Sbjct: 61  LKAHYMEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNP 120

Query: 358 YPSPREKRELAEATGLTTTQVSNWFKNRR 386
           YPSPREKRELAEATGLTTTQVSNWFKNRR
Sbjct: 121 YPSPREKRELAEATGLTTTQVSNWFKNRR 149



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 79  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 138

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 139 TQVSNWFKN 147


>gi|157103720|ref|XP_001648097.1| six/sine homebox transcription factors [Aedes aegypti]
 gi|108869349|gb|EAT33574.1| AAEL014151-PA [Aedes aegypti]
          Length = 171

 Score =  295 bits (755), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 139/157 (88%), Positives = 147/157 (93%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           E +   C VLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRGNFK+LYR+LE
Sbjct: 2   EPLKYCCRVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGNFKELYRLLE 61

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
            HQ++PHNH KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF
Sbjct: 62  HHQYAPHNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 121

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV
Sbjct: 122 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 158



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/63 (96%), Positives = 62/63 (98%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT
Sbjct: 96  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 155

Query: 186 TQV 188
           TQV
Sbjct: 156 TQV 158


>gi|47155918|gb|AAT11873.1| sine oculis-like transcription factor Six1/2 [Cladonema radiatum]
          Length = 235

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 131/179 (73%), Positives = 158/179 (88%)

Query: 218 GFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLY 277
            FT EQ+ACVCEVL+QSGNI+RL RFLWSLP+ + ++  ESVL AK +VAFH+GN ++LY
Sbjct: 20  NFTPEQIACVCEVLEQSGNIDRLSRFLWSLPSYDDVYTTESVLVAKCVVAFHQGNLQELY 79

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            I+E++ F+   H KLQ LWL+ HY+EAEK+RGRPLGAVGKYRVRRK+PLPRTIWDGEET
Sbjct: 80  HIIENNNFTQQYHTKLQMLWLRGHYIEAEKIRGRPLGAVGKYRVRRKYPLPRTIWDGEET 139

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           SYCFKEKSR++LRDWY+ NPYPSPREK+EL++ TGL+TTQVSNWFKNRRQRDRAAE K+
Sbjct: 140 SYCFKEKSRAILRDWYSRNPYPSPREKKELSQGTGLSTTQVSNWFKNRRQRDRAAETKE 198



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 65/69 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK+PLPRTIWDGEETSYCFKEKSR++LRDWY+ NPYPSPREK+EL++ TGL+T
Sbjct: 118 VGKYRVRRKYPLPRTIWDGEETSYCFKEKSRAILRDWYSRNPYPSPREKKELSQGTGLST 177

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 178 TQVSNWFKN 186


>gi|322787039|gb|EFZ13263.1| hypothetical protein SINV_11454 [Solenopsis invicta]
          Length = 223

 Score =  294 bits (752), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 146/219 (66%), Positives = 159/219 (72%), Gaps = 52/219 (23%)

Query: 228 CEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
            +VLQQ+G++ERL RFLWSLPAC +LH++ESVLKAKA+VAFHRG FK+LYRILESH FSP
Sbjct: 5   VQVLQQAGSVERLSRFLWSLPACTRLHRHESVLKAKAIVAFHRGQFKELYRILESHTFSP 64

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAV------------------------------- 316
           +NHPKLQALWLKAHY+EAE+LRGRPLGAV                               
Sbjct: 65  NNHPKLQALWLKAHYIEAERLRGRPLGAVAINGYTLEINKLIVRHSHGVKSLKIYLFMLL 124

Query: 317 ---------------------GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH 355
                                GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  
Sbjct: 125 QNNGVQLVYRRSKRDFIFCFAGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYAT 184

Query: 356 NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           NPYPSPREKRELAE+TGLTTTQVSNWFKNRRQRDRAAE 
Sbjct: 185 NPYPSPREKRELAESTGLTTTQVSNWFKNRRQRDRAAEH 223



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY  NPYPSPREKRELAE+TGLTTTQ
Sbjct: 147 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREKRELAESTGLTTTQ 206

Query: 188 VSNWFSS 194
           VSNWF +
Sbjct: 207 VSNWFKN 213


>gi|312079730|ref|XP_003142300.1| SIX class homeodomain transcription factor [Loa loa]
 gi|307762535|gb|EFO21769.1| SIX class homeodomain transcription factor [Loa loa]
          Length = 193

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/184 (72%), Positives = 155/184 (84%)

Query: 212 PILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRG 271
           PI P   F  +QVACVCEVL QSG+I+RL  F+W++P  + L +NESVLKA+A + FHR 
Sbjct: 8   PIQPESTFDSDQVACVCEVLHQSGDIDRLAEFIWAIPNRDDLRRNESVLKAQAFICFHRQ 67

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NFK+LYRILE++QFSP NH +LQ LWLKAHY EAEK+RGR LGAVGKYR+RRKFPLPRTI
Sbjct: 68  NFKELYRILETNQFSPENHAELQDLWLKAHYSEAEKIRGRELGAVGKYRIRRKFPLPRTI 127

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           WDGEETSYCF+EKSR  L++WY  NPYPSP+EK+ELAE T LT TQVSNWFKNRRQRDRA
Sbjct: 128 WDGEETSYCFREKSRYTLKNWYAKNPYPSPKEKKELAEETHLTVTQVSNWFKNRRQRDRA 187

Query: 392 AEQK 395
           AE K
Sbjct: 188 AENK 191



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCF+EKSR  L++WY  NPYPSP+EK+ELAE T LT 
Sbjct: 112 VGKYRIRRKFPLPRTIWDGEETSYCFREKSRYTLKNWYAKNPYPSPKEKKELAEETHLTV 171

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 172 TQVSNWFKN 180


>gi|354467659|ref|XP_003496286.1| PREDICTED: homeobox protein SIX2-like, partial [Cricetulus griseus]
          Length = 260

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 135/147 (91%), Positives = 142/147 (96%)

Query: 249 ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
           ACE LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKL
Sbjct: 1   ACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKL 60

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLGAVGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELA
Sbjct: 61  RGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELA 120

Query: 369 EATGLTTTQVSNWFKNRRQRDRAAEQK 395
           EATGLTTTQVSNWFKNRRQRDRAAE K
Sbjct: 121 EATGLTTTQVSNWFKNRRQRDRAAEAK 147



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 68  VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 127

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 128 TQVSNWF 134


>gi|417411994|gb|JAA52414.1| Putative transcription factor six, partial [Desmodus rotundus]
          Length = 624

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 129/140 (92%), Positives = 136/140 (97%)

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           E LHKNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRG
Sbjct: 1   EHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRG 60

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           RPLGAVGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEA
Sbjct: 61  RPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEA 120

Query: 371 TGLTTTQVSNWFKNRRQRDR 390
           TGLTTTQVSNWFKNRRQRDR
Sbjct: 121 TGLTTTQVSNWFKNRRQRDR 140



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 66  VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 125

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 126 TQVSNWF 132


>gi|402586007|gb|EJW79946.1| hypothetical protein WUBG_09144, partial [Wuchereria bancrofti]
          Length = 182

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/177 (74%), Positives = 152/177 (85%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F  +QVACVCEVL QSG+I+RL  F+W++P  E L +NESVLKA+A + FHR NFK+LYR
Sbjct: 4   FDSDQVACVCEVLHQSGDIDRLAEFIWAIPNREDLRRNESVLKAQAFICFHRQNFKELYR 63

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILE++QFSP NH +LQ LWLKAHY EAEK+RGR LGAVGKYR+RRKFPLPRTIWDGEETS
Sbjct: 64  ILETNQFSPENHAELQDLWLKAHYSEAEKIRGRELGAVGKYRIRRKFPLPRTIWDGEETS 123

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           YCF+EKSR  L++WY  NPYPSP+EK+ELAE T LT TQVSNWFKNRRQRDRAAE K
Sbjct: 124 YCFREKSRYTLKNWYAKNPYPSPKEKKELAEETHLTVTQVSNWFKNRRQRDRAAENK 180



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCF+EKSR  L++WY  NPYPSP+EK+ELAE T LT 
Sbjct: 101 VGKYRIRRKFPLPRTIWDGEETSYCFREKSRYTLKNWYAKNPYPSPKEKKELAEETHLTV 160

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 161 TQVSNWFKN 169


>gi|350297795|gb|AEQ28354.1| Six2, partial [Polyodon spathula]
          Length = 145

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 131/143 (91%), Positives = 139/143 (97%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVACVCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 3   MLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 62

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNHPKLQ LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 63  FRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 122

Query: 333 DGEETSYCFKEKSRSVLRDWYTH 355
           DGEETSYCFKEKSR VLR+WYTH
Sbjct: 123 DGEETSYCFKEKSRGVLREWYTH 145



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 38/40 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH 165
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSR VLR+WYTH
Sbjct: 106 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRGVLREWYTH 145


>gi|343098392|tpg|DAA34946.1| TPA_inf: six-type transcription factor 1/2e [Helobdella robusta]
          Length = 175

 Score =  284 bits (726), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 129/175 (73%), Positives = 153/175 (87%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FTQEQVACVCE+L  S  ++RL RFLWSLP C ++ +NESV+K++ ++A+  GN+++LY 
Sbjct: 1   FTQEQVACVCEILLASAKLDRLYRFLWSLPDCPQIRQNESVVKSECVLAYCGGNYRELYN 60

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES +FS HNH  LQ LWLKAHY EAEK RGRPLGAVGKYRVRRK+PLPRTIWDGEETS
Sbjct: 61  LLESREFSTHNHNCLQTLWLKAHYAEAEKQRGRPLGAVGKYRVRRKYPLPRTIWDGEETS 120

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           YCFKEKSR+ LRDWY+HNPYP+P EKR+L+ +TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 121 YCFKEKSRTTLRDWYSHNPYPTPSEKRQLSASTGLTTTQVSNWFKNRRQRDRAAE 175



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 63/67 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRK+PLPRTIWDGEETSYCFKEKSR+ LRDWY+HNPYP+P EKR+L+ +TGLTT
Sbjct: 98  VGKYRVRRKYPLPRTIWDGEETSYCFKEKSRTTLRDWYSHNPYPTPSEKRQLSASTGLTT 157

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 158 TQVSNWF 164


>gi|358256484|dbj|GAA47994.1| protein sine oculis [Clonorchis sinensis]
          Length = 722

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 137/211 (64%), Positives = 164/211 (77%), Gaps = 3/211 (1%)

Query: 185 TTQVSNWFSSANITSSPNTSTSTASISPILPS--FGFTQEQVACVCEVLQQSGNIERLGR 242
           TT V N F+ A  TS+ ++ T T S     PS    FT+ Q+ C+CEVLQQ G+I RL  
Sbjct: 91  TTPVFNVFTCA-PTSNCSSETVTGSHDKQHPSCSLCFTEPQITCICEVLQQRGDITRLEY 149

Query: 243 FLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY 302
           FL +LP  E++   ESVL A+A VAFH+GN+ +LY +LESH FS  +H +LQ+LWL+AHY
Sbjct: 150 FLQTLPQLERVQLLESVLAARATVAFHKGNYSELYNLLESHSFSIEHHSRLQSLWLRAHY 209

Query: 303 VEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPR 362
            E EK +GR LGAV KYR+RRKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPR
Sbjct: 210 AEEEKAKGRVLGAVAKYRIRRKFPLPRTIWDGEETSYCFKEKSRTLLREWYNHNPYPSPR 269

Query: 363 EKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           +KRELAE TGLTTTQVSNWFKNRRQRDRA +
Sbjct: 270 DKRELAETTGLTTTQVSNWFKNRRQRDRAID 300



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/71 (81%), Positives = 66/71 (92%)

Query: 122 IIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 181
           ++  + KYR+RRKFPLPRTIWDGEETSYCFKEKSR++LR+WY HNPYPSPR+KRELAE T
Sbjct: 219 VLGAVAKYRIRRKFPLPRTIWDGEETSYCFKEKSRTLLREWYNHNPYPSPRDKRELAETT 278

Query: 182 GLTTTQVSNWF 192
           GLTTTQVSNWF
Sbjct: 279 GLTTTQVSNWF 289


>gi|344247101|gb|EGW03205.1| Homeobox protein SIX2 [Cricetulus griseus]
          Length = 299

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/141 (92%), Positives = 137/141 (97%)

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
           KNESVLKAKA+VAFHRGNF++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLG
Sbjct: 46  KNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 105

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AVGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLT
Sbjct: 106 AVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLT 165

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
           TTQVSNWFKNRRQRDRAAE K
Sbjct: 166 TTQVSNWFKNRRQRDRAAEAK 186



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 107 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 166

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 167 TQVSNWF 173


>gi|56694860|gb|AAW23092.1| Six12a [Oikopleura dioica]
 gi|313233843|emb|CBY10012.1| unnamed protein product [Oikopleura dioica]
          Length = 243

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 129/182 (70%), Positives = 151/182 (82%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           ++ EQ+ C+ EVL+ S N E+L  FL  LP  E+L  NE++LKAKA  AF RG+F++LY+
Sbjct: 8   YSIEQIICLLEVLETSQNGEKLQEFLMRLPKSEELENNEAILKAKATAAFFRGDFRELYK 67

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILES Q+SP  H +LQ LWLKAHY+EAEK+RGRPLGAVGKYRVRRKFPLPRTIWDGEETS
Sbjct: 68  ILESRQYSPAFHDRLQQLWLKAHYIEAEKVRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 127

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           YCFKEKSR+VLRDWY  +PYPSPREKRELAE T LT TQVSNWFKNRRQR+RAAE K  +
Sbjct: 128 YCFKEKSRAVLRDWYLKSPYPSPREKRELAEMTDLTVTQVSNWFKNRRQRERAAEAKGTT 187

Query: 399 VH 400
           + 
Sbjct: 188 LR 189



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 62/69 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR+VLRDWY  +PYPSPREKRELAE T LT 
Sbjct: 105 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRAVLRDWYLKSPYPSPREKRELAEMTDLTV 164

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 165 TQVSNWFKN 173


>gi|308220154|gb|ADO22649.1| SIX class homeobox transcription factor SIX27 [Mnemiopsis leidyi]
          Length = 621

 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 131/192 (68%), Positives = 152/192 (79%), Gaps = 6/192 (3%)

Query: 223 QVACVCEVLQQSGNIERLGRFLWSLPACEK-LHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           QVACVCE LQQSGNI+RL  FLW+LP  +  L  NESVLKA+A V F+ GN+ ++YRIL 
Sbjct: 131 QVACVCEALQQSGNIKRLAAFLWTLPCHDSSLMNNESVLKARAEVCFNEGNYAEVYRILS 190

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           S  +SP++H KLQ +WLK+HY+EAEK RGRPLGAV KYR+RRK+PLP TIWDGEETSYCF
Sbjct: 191 SRNYSPNSHAKLQQIWLKSHYIEAEKARGRPLGAVDKYRIRRKYPLPATIWDGEETSYCF 250

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHS 401
           KEKSR+ LRDWY  N YPSP +KR+LAE TGLT TQVSNWFKNRRQRDRAAE K     S
Sbjct: 251 KEKSRNRLRDWYAQNKYPSPHDKRQLAETTGLTLTQVSNWFKNRRQRDRAAETK-----S 305

Query: 402 FRVNIGGDSKTQ 413
            R   GG+  T+
Sbjct: 306 KRGGGGGEKDTE 317



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP TIWDGEETSYCFKEKSR+ LRDWY  N YPSP +KR+LAE TGLT 
Sbjct: 225 VDKYRIRRKYPLPATIWDGEETSYCFKEKSRNRLRDWYAQNKYPSPHDKRQLAETTGLTL 284

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 285 TQVSNWF 291


>gi|432939252|ref|XP_004082597.1| PREDICTED: homeobox protein SIX4-like [Oryzias latipes]
          Length = 680

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/193 (65%), Positives = 149/193 (77%), Gaps = 1/193 (0%)

Query: 199 SSPNT-STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE 257
           ++PNT +  T  +     S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NE
Sbjct: 44  TAPNTDAVRTELLVSAASSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNE 103

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           S+LKA+A+VAFH+  +++LY ILE+H FSP NH  LQ LW KA Y EAEK RGRPLGAV 
Sbjct: 104 SILKAQALVAFHQARYQELYSILENHSFSPSNHTFLQDLWYKARYTEAEKARGRPLGAVD 163

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQ
Sbjct: 164 KYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSLTQ 223

Query: 378 VSNWFKNRRQRDR 390
           VSNWFKNRRQRDR
Sbjct: 224 VSNWFKNRRQRDR 236



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 162 VDKYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSL 221

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 222 TQVSNWF 228


>gi|144369381|dbj|BAF56233.1| Six-B1 [Coeloplana willeyi]
          Length = 434

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 130/178 (73%), Positives = 148/178 (83%), Gaps = 1/178 (0%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACE-KLHKNESVLKAKAMVAFHRGNFKDLY 277
           FT  QVACVCE L QSGNI+RL  FLWSLP  +  L  NESV+KA+A VAF+ GNF ++Y
Sbjct: 90  FTAGQVACVCEALLQSGNIKRLAAFLWSLPCHDSNLMNNESVMKARAEVAFNNGNFSEVY 149

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
           RIL S  FSP++HPKLQ LWLK+HY+EAE  RGRPLGAV KYR+RRK+PLP TIWDGEET
Sbjct: 150 RILGSRNFSPNSHPKLQQLWLKSHYIEAETARGRPLGAVDKYRIRRKYPLPNTIWDGEET 209

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           SYCFKEKSR+ LR+WY  N YPSP EKR+LAE+TGL+ TQVSNWFKNRRQRDRAAE K
Sbjct: 210 SYCFKEKSRNRLREWYAQNKYPSPHEKRQLAESTGLSLTQVSNWFKNRRQRDRAAETK 267



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP TIWDGEETSYCFKEKSR+ LR+WY  N YPSP EKR+LAE+TGL+ 
Sbjct: 188 VDKYRIRRKYPLPNTIWDGEETSYCFKEKSRNRLREWYAQNKYPSPHEKRQLAESTGLSL 247

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 248 TQVSNWF 254


>gi|348531278|ref|XP_003453137.1| PREDICTED: homeobox protein SIX4-like [Oreochromis niloticus]
          Length = 682

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 141/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+  +++
Sbjct: 62  SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHQARYQE 121

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILE+H FSP NH  LQ LW KA Y EAEK RGRPLGAV KYR+RRK+PLPRTIWDGE
Sbjct: 122 LYSILENHSFSPSNHTFLQDLWYKARYTEAEKARGRPLGAVDKYRIRRKYPLPRTIWDGE 181

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 182 ETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 236



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 162 VDKYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSL 221

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 222 TQVSNWF 228


>gi|5106944|gb|AAD39900.1|AF108815_1 homeobox protein SIX11, partial [Petromyzon marinus]
          Length = 149

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 137/149 (91%)

Query: 238 ERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALW 297
           ERLG FLWSLPACE++ ++ES+L AKA+VAFH+GNF++LY +LES  FS  NHPKLQ LW
Sbjct: 1   ERLGSFLWSLPACEQIQRSESILMAKAVVAFHQGNFRELYAVLESQPFSARNHPKLQQLW 60

Query: 298 LKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNP 357
           LKAHY EAE+LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE+SR VLRDWY HNP
Sbjct: 61  LKAHYTEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKERSRGVLRDWYAHNP 120

Query: 358 YPSPREKRELAEATGLTTTQVSNWFKNRR 386
           YPSPREKRELA+ATGLTTTQVSNWFKNRR
Sbjct: 121 YPSPREKRELAQATGLTTTQVSNWFKNRR 149



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKE+SR VLRDWY HNPYPSPREKRELA+ATGLTT
Sbjct: 79  VGKYRVRRKFPLPRTIWDGEETSYCFKERSRGVLRDWYAHNPYPSPREKRELAQATGLTT 138

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 139 TQVSNWF 145


>gi|194578873|ref|NP_001124080.1| sine oculis homeobox homolog 9 [Danio rerio]
 gi|190337246|gb|AAI63024.1| Si:dkey-149j18.3 protein [Danio rerio]
          Length = 235

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 131/191 (68%), Positives = 149/191 (78%), Gaps = 8/191 (4%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKL--------HKNESVLKAKAMVA 267
           + GF+ EQVACVCEVL QSG+++RL  FL SLP+               ESVLKA+A VA
Sbjct: 2   AMGFSPEQVACVCEVLLQSGSMDRLSSFLCSLPSISTSSNMYMGFGQSQESVLKARAAVA 61

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           FH   F +LY +LE + FSP +HP LQ LWL+AHY+EAE  RGRPLGAVGKYR+RRKFPL
Sbjct: 62  FHHCRFTELYALLEGNVFSPRSHPLLQQLWLRAHYMEAELQRGRPLGAVGKYRIRRKFPL 121

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           PRTIWDGEETSYCFKEKSRSVLR+WY   PYPSPREKR+LA ATGLT TQVSNWFKNRRQ
Sbjct: 122 PRTIWDGEETSYCFKEKSRSVLREWYCRKPYPSPREKRDLAAATGLTATQVSNWFKNRRQ 181

Query: 388 RDRAAEQKDGS 398
           RDRAA  + G+
Sbjct: 182 RDRAATSRQGT 192



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 67/91 (73%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSRSVLR+WY   PYPSPREKR+LA ATGLT 
Sbjct: 110 VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRSVLREWYCRKPYPSPREKRDLAAATGLTA 169

Query: 186 TQVSNWFSSANITSSPNTSTSTASISPILPS 216
           TQVSNWF +        TS    S    L S
Sbjct: 170 TQVSNWFKNRRQRDRAATSRQGTSAGAFLSS 200


>gi|443732542|gb|ELU17226.1| hypothetical protein CAPTEDRAFT_226834 [Capitella teleta]
          Length = 371

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/191 (67%), Positives = 155/191 (81%), Gaps = 4/191 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFK 274
           F  EQVA VCE L++SG++ERLGRFLWSLP    A + L++NE+VL+A+A+VAFH GNFK
Sbjct: 103 FGTEQVAQVCETLEESGDVERLGRFLWSLPVNPAASDALNRNEAVLRARALVAFHTGNFK 162

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           DLY ILES +FS  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDG
Sbjct: 163 DLYHILESTKFSKGSHAKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDG 222

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           E+ S+CFKE++R  LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNRRQRDRAA  
Sbjct: 223 EQKSHCFKERTRHHLREWYLQDPYPNPAKKRELAAATGLTPTQVGNWFKNRRQRDRAAAV 282

Query: 395 KDGSVHSFRVN 405
           K+  +   R N
Sbjct: 283 KNRLMSHHRSN 293



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ S+CFKE++R  LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 204 VDKYRVRKKFPLPRTIWDGEQKSHCFKERTRHHLREWYLQDPYPNPAKKRELAAATGLTP 263

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 264 TQVGNWF 270


>gi|11344511|dbj|BAB18511.1| homeobox protein six4.2 [Danio rerio]
          Length = 595

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 140/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NES+L+A+A+VAFH+  +++
Sbjct: 79  SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILRAQALVAFHQARYQE 138

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILESH FSP  H  LQ LW KA Y EAEK RGRPLGAV KYR+RRKFPLPRTIWDGE
Sbjct: 139 LYSILESHSFSPSCHSALQDLWYKARYTEAEKARGRPLGAVDKYRLRRKFPLPRTIWDGE 198

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 199 ETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 253



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 179 VDKYRLRRKFPLPRTIWDGEETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSL 238

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 239 TQVSNWF 245


>gi|301605612|ref|XP_002932435.1| PREDICTED: homeobox protein SIX3-like [Xenopus (Silurana)
           tropicalis]
          Length = 301

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LPS  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 50  LPSLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 109

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 110 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 169

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 170 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 224



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 156 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 215

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 216 TQVGNWF 222


>gi|301069374|ref|NP_571793.2| sine oculis homeobox homolog 4a [Danio rerio]
 gi|134025096|gb|AAI34898.1| Sine oculis homeobox homolog 4.2 [Danio rerio]
          Length = 593

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 140/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NES+L+A+A+VAFH+  +++
Sbjct: 79  SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILRAQALVAFHQARYQE 138

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILESH FSP  H  LQ LW KA Y EAEK RGRPLGAV KYR+RRKFPLPRTIWDGE
Sbjct: 139 LYSILESHSFSPSCHSALQDLWYKARYTEAEKARGRPLGAVDKYRLRRKFPLPRTIWDGE 198

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 199 ETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 253



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 179 VDKYRLRRKFPLPRTIWDGEETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSL 238

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 239 TQVSNWF 245


>gi|33859632|ref|NP_035512.1| homeobox protein SIX4 [Mus musculus]
 gi|2495271|sp|Q61321.1|SIX4_MOUSE RecName: Full=Homeobox protein SIX4; AltName: Full=Sine oculis
           homeobox homolog 4; AltName: Full=Skeletal
           muscle-specific ARE-binding protein AREC3
 gi|1255626|dbj|BAA08915.1| AREC3 [Mus musculus]
 gi|187953747|gb|AAI37932.1| Sine oculis-related homeobox 4 homolog (Drosophila) [Mus musculus]
 gi|187957564|gb|AAI37935.1| Sine oculis-related homeobox 4 homolog (Drosophila) [Mus musculus]
          Length = 775

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 121/176 (68%), Positives = 139/176 (78%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 97  PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDG
Sbjct: 157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 216

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 272



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 198 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 257

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 258 TQVSNWF 264


>gi|157818415|ref|NP_001100209.1| homeobox protein SIX4 [Rattus norvegicus]
 gi|149051435|gb|EDM03608.1| sine oculis-related homeobox 4 homolog (Drosophila) (predicted)
           [Rattus norvegicus]
          Length = 705

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 121/176 (68%), Positives = 139/176 (78%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 27  PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 86

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDG
Sbjct: 87  ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 146

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 147 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 202



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 128 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 187

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 188 TQVSNWF 194


>gi|47230131|emb|CAG10545.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 494

 Score =  271 bits (693), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 121/175 (69%), Positives = 140/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+  F++
Sbjct: 24  SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHQARFQE 83

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           +Y ILE+H FSP NH  LQ LW KA Y EAEK RGR LGAV KYR+RRK+PLPRTIWDGE
Sbjct: 84  MYSILENHSFSPSNHTFLQDLWYKARYTEAEKARGRSLGAVDKYRIRRKYPLPRTIWDGE 143

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 144 ETVYCFKERSRNALKDMYNQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 198



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 124 VDKYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDMYNQNRYPSPAEKRNLAKITGLSL 183

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 184 TQVSNWF 190


>gi|431904451|gb|ELK09834.1| Homeobox protein SIX4 [Pteropus alecto]
          Length = 776

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 102 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 161

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 162 YSILESHSFESANHPMLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 221

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 222 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 275



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 201 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 260

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 261 TQVSNWF 267


>gi|148704567|gb|EDL36514.1| sine oculis-related homeobox 4 homolog (Drosophila) [Mus musculus]
          Length = 719

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 122/176 (69%), Positives = 140/176 (79%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P  GF+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 41  PRSGFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 100

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDG
Sbjct: 101 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 160

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 161 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 216



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 142 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 201

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 202 TQVSNWF 208


>gi|395843464|ref|XP_003794503.1| PREDICTED: homeobox protein SIX4 [Otolemur garnettii]
          Length = 727

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 52  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 111

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 112 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 171

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 172 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 225



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 151 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 210

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 211 TQVSNWF 217


>gi|410212868|gb|JAA03653.1| SIX homeobox 4 [Pan troglodytes]
 gi|410335197|gb|JAA36545.1| SIX homeobox 4 [Pan troglodytes]
          Length = 781

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 279



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 205 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 264

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 265 TQVSNWF 271


>gi|142976638|ref|NP_059116.3| homeobox protein SIX4 [Homo sapiens]
 gi|254763333|sp|Q9UIU6.2|SIX4_HUMAN RecName: Full=Homeobox protein SIX4; AltName: Full=Sine oculis
           homeobox homolog 4
          Length = 781

 Score =  271 bits (692), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 279



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 205 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 264

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 265 TQVSNWF 271


>gi|410898469|ref|XP_003962720.1| PREDICTED: homeobox protein SIX4-like [Takifugu rubripes]
          Length = 682

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 123/193 (63%), Positives = 148/193 (76%), Gaps = 1/193 (0%)

Query: 199 SSPNT-STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE 257
           ++PNT +  T  +     S  F+ EQVACVCE LQQ GN++RL RFLWSLP  + L  NE
Sbjct: 44  TTPNTDAVRTELLVSAASSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNE 103

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           S+LKA+A+VAFH+  ++++Y +LE+H FSP NH  LQ LW KA Y EAEK RGR LGAV 
Sbjct: 104 SILKAQALVAFHQARYQEMYSVLENHSFSPSNHTFLQDLWYKARYTEAEKARGRSLGAVD 163

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQ
Sbjct: 164 KYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDMYNQNRYPSPAEKRNLAKITGLSLTQ 223

Query: 378 VSNWFKNRRQRDR 390
           VSNWFKNRRQRDR
Sbjct: 224 VSNWFKNRRQRDR 236



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 162 VDKYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDMYNQNRYPSPAEKRNLAKITGLSL 221

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 222 TQVSNWF 228


>gi|347543734|ref|NP_001231543.1| homeobox protein SIX4 [Sus scrofa]
          Length = 785

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 109 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 168

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 169 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 228

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 229 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 282



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 208 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 267

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 268 TQVSNWF 274


>gi|417404555|gb|JAA49024.1| Putative transcription factor six [Desmodus rotundus]
          Length = 779

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 139/175 (79%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           +  F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +
Sbjct: 103 TLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPE 162

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGE
Sbjct: 163 LYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGE 222

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 223 ETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 277



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 203 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 262

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 263 TQVSNWF 269


>gi|296215201|ref|XP_002754024.1| PREDICTED: homeobox protein SIX4 [Callithrix jacchus]
          Length = 773

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 97  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 156

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 157 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 216

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 270



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 196 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 255

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 256 TQVSNWF 262


>gi|149737151|ref|XP_001497969.1| PREDICTED: homeobox protein SIX4 [Equus caballus]
          Length = 784

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 108 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 167

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 168 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 227

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 228 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 281



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 207 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 266

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 267 TQVSNWF 273


>gi|297297998|ref|XP_001096803.2| PREDICTED: homeobox protein SIX4 isoform 2 [Macaca mulatta]
          Length = 772

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 97  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 156

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 157 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 216

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 270



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 196 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 255

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 256 TQVSNWF 262


>gi|410258450|gb|JAA17192.1| SIX homeobox 4 [Pan troglodytes]
          Length = 781

 Score =  270 bits (691), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 279



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 205 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 264

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 265 TQVSNWF 271


>gi|363734985|ref|XP_003641490.1| PREDICTED: homeobox protein SIX4 [Gallus gallus]
          Length = 727

 Score =  270 bits (691), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 118/176 (67%), Positives = 139/176 (78%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES++KA+A+VAFH+G + 
Sbjct: 49  PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPPSDLLRGNESLMKARALVAFHQGIYA 108

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F   NHP LQ LW KA Y EAE+ RG+PLGAV KYR+RRK+PLPRTIWDG
Sbjct: 109 ELYSILESHNFDSSNHPLLQELWYKARYTEAERARGKPLGAVDKYRLRRKYPLPRTIWDG 168

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 169 EETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 224



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 150 VDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSL 209

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 210 TQVSNWF 216


>gi|403264354|ref|XP_003924451.1| PREDICTED: homeobox protein SIX4 [Saimiri boliviensis boliviensis]
          Length = 773

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 97  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 156

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 157 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 216

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 270



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 196 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 255

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 256 TQVSNWF 262


>gi|67514240|gb|AAH98282.1| SIX4 protein [Homo sapiens]
 gi|71043434|gb|AAH99722.1| SIX4 protein [Homo sapiens]
 gi|74353519|gb|AAI01935.1| SIX4 protein [Homo sapiens]
 gi|119601192|gb|EAW80786.1| sine oculis homeobox homolog 4 (Drosophila) [Homo sapiens]
 gi|167773427|gb|ABZ92148.1| SIX homeobox 4 [synthetic construct]
 gi|167773877|gb|ABZ92373.1| SIX homeobox 4 [synthetic construct]
          Length = 760

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 85  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 144

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 145 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 204

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 205 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 258



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 184 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|6230605|dbj|BAA86223.1| SIX4 [Homo sapiens]
 gi|66990113|gb|AAH98135.1| SIX4 protein [Homo sapiens]
          Length = 760

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 85  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 144

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 145 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 204

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 205 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 258



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 184 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|405975981|gb|EKC40506.1| Homeobox protein SIX4 [Crassostrea gigas]
          Length = 354

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 134/212 (63%), Positives = 158/212 (74%), Gaps = 8/212 (3%)

Query: 198 TSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE 257
           + SPN S ST S      +  F+ E VACVCE LQQ G+IERLGRFLWSLP  E L  +E
Sbjct: 58  SGSPN-SNSTNSELLSGKNLTFSPEHVACVCEALQQKGDIERLGRFLWSLPPSELLRGSE 116

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           +VLKA+A VAFHRG++++LY ILESH+F   NH  LQ LW KAHY+EA+K+RGRPLGAV 
Sbjct: 117 AVLKARATVAFHRGSYRELYAILESHKFDEGNHAFLQQLWYKAHYMEAQKIRGRPLGAVD 176

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+RRK+PLP+TIWDGEET YCFKEKSR  L++ Y +N YP+P EKR LA+ TGLT TQ
Sbjct: 177 KYRLRRKYPLPKTIWDGEETIYCFKEKSRQSLKECYKNNRYPTPDEKRNLAKKTGLTLTQ 236

Query: 378 VSNWFKNRRQRDRAAEQKDGS-------VHSF 402
           VSNWFKNRRQRDR   Q  G        +HSF
Sbjct: 237 VSNWFKNRRQRDRTPHQNQGKEMMEESMMHSF 268



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP+TIWDGEET YCFKEKSR  L++ Y +N YP+P EKR LA+ TGLT 
Sbjct: 175 VDKYRLRRKYPLPKTIWDGEETIYCFKEKSRQSLKECYKNNRYPTPDEKRNLAKKTGLTL 234

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 235 TQVSNWF 241


>gi|397523657|ref|XP_003831840.1| PREDICTED: homeobox protein SIX4 [Pan paniscus]
          Length = 771

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 96  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 155

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 156 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 215

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 216 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 269



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 195 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 254

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 255 TQVSNWF 261


>gi|443692475|gb|ELT94068.1| hypothetical protein CAPTEDRAFT_227938 [Capitella teleta]
          Length = 506

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 143/175 (81%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           +  F+ EQVACVCE LQQSGN+ERL RFLWSLP  E L  +E+VLKA+A VAFH+GNF++
Sbjct: 95  ALTFSPEQVACVCEALQQSGNMERLARFLWSLPPSELLRGSEAVLKARATVAFHKGNFRE 154

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY I ESH F P NH  +Q +W KAHY+EA+K+RGRPLGAV KYR+RRK+PLP+TIWDGE
Sbjct: 155 LYAITESHNFDPANHAVMQQMWYKAHYLEAQKVRGRPLGAVDKYRLRRKYPLPKTIWDGE 214

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKEKSR  L++ Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDR
Sbjct: 215 ETIYCFKEKSRQALKECYKQNRYPTPDEKRALAKKTGLTLTQVSNWFKNRRQRDR 269



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP+TIWDGEET YCFKEKSR  L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 195 VDKYRLRRKYPLPKTIWDGEETIYCFKEKSRQALKECYKQNRYPTPDEKRALAKKTGLTL 254

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 255 TQVSNWF 261


>gi|395510219|ref|XP_003759378.1| PREDICTED: homeobox protein SIX4, partial [Sarcophilus harrisii]
          Length = 686

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 11  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 70

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 71  YSILESHSFESANHPLLQQLWYKARYSEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 130

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 131 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 184



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 110 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 169

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 170 TQVSNWF 176


>gi|297695239|ref|XP_002824861.1| PREDICTED: homeobox protein SIX4, partial [Pongo abelii]
          Length = 698

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 23  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 82

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 83  YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 142

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 143 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 196



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 122 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 181

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 182 TQVSNWF 188


>gi|73964175|ref|XP_547842.2| PREDICTED: homeobox protein SIX4 [Canis lupus familiaris]
          Length = 785

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 110 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 169

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 170 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 229

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 230 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 283



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 209 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 268

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 269 TQVSNWF 275


>gi|402876360|ref|XP_003901940.1| PREDICTED: homeobox protein SIX4 [Papio anubis]
          Length = 772

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 119/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 97  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRANESLLKARALVAFHQGIYPEL 156

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y I+ESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 157 YSIIESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 216

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 270



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 196 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 255

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 256 TQVSNWF 262


>gi|260788242|ref|XP_002589159.1| SIX class homeodomain transcription factor [Branchiostoma floridae]
 gi|229274334|gb|EEN45170.1| SIX class homeodomain transcription factor [Branchiostoma floridae]
          Length = 273

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/175 (69%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  FT EQVA VCE L++SG+IERLGRFLWSLP    A + L+KNE+VL+A+A+VAFH
Sbjct: 7   LPTLNFTPEQVASVCETLEESGDIERLGRFLWSLPVAPGAADALNKNEAVLRARAVVAFH 66

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 67  TGNFRDLYHILENHRFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 126

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P++KRELA+ATGLT TQV NWFKN
Sbjct: 127 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPQKKRELAQATGLTPTQVGNWFKN 181



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 61/67 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P++KRELA+ATGLT 
Sbjct: 113 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPQKKRELAQATGLTP 172

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 173 TQVGNWF 179


>gi|348573561|ref|XP_003472559.1| PREDICTED: homeobox protein SIX4 [Cavia porcellus]
          Length = 766

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 92  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 151

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 152 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 211

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 212 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 265



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 191 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 250

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 251 TQVSNWF 257


>gi|291231307|ref|XP_002735606.1| PREDICTED: sine oculis-related homeobox 4-like [Saccoglossus
           kowalevskii]
          Length = 304

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/176 (70%), Positives = 145/176 (82%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ +QVACVCE LQ+SGN +RL +FLWSLP  E L  +ESVL+A+A VAFHRGNFK+
Sbjct: 35  SLTFSPQQVACVCEALQKSGNTDRLAQFLWSLPPNELLRGSESVLRARATVAFHRGNFKE 94

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY I+ES  F  H+H +LQ LW KAHY+EAEK+RGRPLGAV KYR+RRKFPLP+TIWDGE
Sbjct: 95  LYTIMESQNFDQHSHNELQNLWYKAHYIEAEKIRGRPLGAVDKYRIRRKFPLPKTIWDGE 154

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           ET YCFKEKSR+ L++ Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDRA
Sbjct: 155 ETVYCFKEKSRTALKECYKQNRYPTPDEKRNLAKVTGLTLTQVSNWFKNRRQRDRA 210



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 135 VDKYRIRRKFPLPKTIWDGEETVYCFKEKSRTALKECYKQNRYPTPDEKRNLAKVTGLTL 194

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 195 TQVSNWF 201


>gi|334310617|ref|XP_003339515.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX4-like
           [Monodelphis domestica]
          Length = 807

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 120/174 (68%), Positives = 138/174 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 131 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 190

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 191 YSILESHSFESANHPLLQQLWYKARYSEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 250

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 251 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 304



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 230 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 289

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 290 TQVSNWF 296


>gi|47218211|emb|CAF97075.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 302

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 52  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 111

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 112 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 171

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 172 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 226



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 158 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 217

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 218 TQVGNWF 224


>gi|332842086|ref|XP_003314345.1| PREDICTED: homeobox protein SIX4, partial [Pan troglodytes]
          Length = 994

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/194 (64%), Positives = 147/194 (75%), Gaps = 1/194 (0%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 59  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 118

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 119 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 178

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR-AAEQK 395
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR  +E +
Sbjct: 179 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQ 238

Query: 396 DGSVHSFRVNIGGD 409
             S H   V+ G +
Sbjct: 239 SKSCHPLPVSGGAN 252



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 158 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 217

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 218 TQVSNWF 224


>gi|410900782|ref|XP_003963875.1| PREDICTED: homeobox protein SIX3-like [Takifugu rubripes]
          Length = 294

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|171545967|ref|NP_001116400.1| putative transcription factor [Oryzias latipes]
 gi|168478518|emb|CAM35798.1| putative transcription factor [Oryzias latipes]
          Length = 294

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|37589630|gb|AAH59414.1| Sine oculis homeobox homolog 3a [Danio rerio]
          Length = 294

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|1255630|dbj|BAA08917.1| AREC3 [Mus musculus]
          Length = 719

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 138/172 (80%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +LY 
Sbjct: 45  FSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYS 104

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEET 
Sbjct: 105 ILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETV 164

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 165 YCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 216



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 142 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 201

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 202 TQVSNWF 208


>gi|348501596|ref|XP_003438355.1| PREDICTED: homeobox protein SIX3-like [Oreochromis niloticus]
          Length = 294

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|18859363|ref|NP_571437.1| homeobox protein SIX3 [Danio rerio]
 gi|3047417|gb|AAC27448.1| homeobox protein Six3 [Danio rerio]
          Length = 294

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|11344509|dbj|BAB18513.1| homeobox protein six4.1 [Danio rerio]
 gi|68085152|gb|AAH66428.2| Six4.1 protein [Danio rerio]
          Length = 615

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 139/175 (79%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE L Q GN++RL RFLWSLP  + L  NES+LKA+A+VAFH   +++
Sbjct: 62  SLAFSPEQVACVCEALMQGGNVDRLARFLWSLPQSDLLRGNESILKAQAIVAFHHARYQE 121

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILE+H FSP NH  LQ +W KA Y EAEK RGRPLGAV KYR+RRK+PLPRTIWDGE
Sbjct: 122 LYCILENHSFSPSNHSSLQDMWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGE 181

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 182 ETVYCFKERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSLTQVSNWFKNRRQRDR 236



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 162 VDKYRLRRKYPLPRTIWDGEETVYCFKERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSL 221

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 222 TQVSNWF 228


>gi|395829587|ref|XP_003787931.1| PREDICTED: homeobox protein SIX3 [Otolemur garnettii]
          Length = 325

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 75  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 134

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 135 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 194

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 195 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 249



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 181 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 240

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 241 TQVGNWF 247


>gi|18859365|ref|NP_571792.1| sine oculis homeobox homolog 4b [Danio rerio]
 gi|3892563|gb|AAC78389.1| homeodomain protein six8 [Danio rerio]
          Length = 545

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 139/175 (79%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQVACVCE L Q GN++RL RFLWSLP  + L  NES+LKA+A+VAFH   +++
Sbjct: 62  SLAFSPEQVACVCEALMQGGNVDRLARFLWSLPQSDLLRGNESILKAQAIVAFHHARYQE 121

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILE+H FSP NH  LQ +W KA Y EAEK RGRPLGAV KYR+RRK+PLPRTIWDGE
Sbjct: 122 LYCILENHSFSPSNHSSLQDMWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGE 181

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 182 ETVYCFKERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSLTQVSNWFKNRRQRDR 236



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L+D Y  N YPSP EKR LA+ TGL+ 
Sbjct: 162 VDKYRLRRKYPLPRTIWDGEETVYCFKERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSL 221

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 222 TQVSNWF 228


>gi|300797619|ref|NP_001180053.1| homeobox protein SIX3 [Bos taurus]
 gi|296482652|tpg|DAA24767.1| TPA: SIX homeobox 3-like [Bos taurus]
          Length = 328

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 78  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 137

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 138 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 197

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 198 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 252



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 184 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 243

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 244 TQVGNWF 250


>gi|45383428|ref|NP_989695.1| homeobox protein SIX3 [Gallus gallus]
 gi|6094292|sp|O42406.2|SIX3_CHICK RecName: Full=Homeobox protein SIX3; AltName: Full=CSIX3; AltName:
           Full=Sine oculis homeobox homolog 3
 gi|3319912|emb|CAA75380.1| cSIX3 protein [Gallus gallus]
 gi|34581775|gb|AAQ76043.1| sine oculis related homeobox 3 [Gallus gallus]
          Length = 314

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 64  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 123

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 124 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 183

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 184 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 238



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 170 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 229

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 230 TQVGNWF 236


>gi|296223962|ref|XP_002807587.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX3-like
           [Callithrix jacchus]
          Length = 331

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 81  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 140

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 141 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 200

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 201 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 255



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 187 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 246

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 247 TQVGNWF 253


>gi|327280967|ref|XP_003225222.1| PREDICTED: homeobox protein SIX3-like [Anolis carolinensis]
          Length = 336

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 86  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 145

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 146 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 205

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 206 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 260



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 192 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 251

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 252 TQVGNWF 258


>gi|4885597|ref|NP_005404.1| homeobox protein SIX3 [Homo sapiens]
 gi|6094293|sp|O95343.1|SIX3_HUMAN RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis
           homeobox homolog 3
 gi|3885840|gb|AAD11939.1| homeobox protein Six3 [Homo sapiens]
 gi|4321417|gb|AAD15753.1| Six3 [Homo sapiens]
 gi|4775351|emb|CAB42539.1| SIX3 protein [Homo sapiens]
 gi|5762274|gb|AAD51091.1| SIX3 protein [Homo sapiens]
 gi|62702361|gb|AAX93283.1| unknown [Homo sapiens]
 gi|119620672|gb|EAX00267.1| sine oculis homeobox homolog 3 (Drosophila), isoform CRA_a [Homo
           sapiens]
 gi|119620673|gb|EAX00268.1| sine oculis homeobox homolog 3 (Drosophila), isoform CRA_a [Homo
           sapiens]
 gi|157170306|gb|AAI53027.1| SIX homeobox 3 [synthetic construct]
          Length = 332

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 82  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 141

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 142 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 201

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 202 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 256



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 188 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 247

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 248 TQVGNWF 254


>gi|402890750|ref|XP_003908638.1| PREDICTED: homeobox protein SIX3 [Papio anubis]
          Length = 331

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 81  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 140

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 141 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 200

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 201 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 255



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 187 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 246

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 247 TQVGNWF 253


>gi|59939908|ref|NP_035511.2| homeobox protein SIX3 [Mus musculus]
 gi|6175034|sp|Q62233.2|SIX3_MOUSE RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis
           homeobox homolog 3
 gi|67867496|gb|AAH98096.1| Sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
          Length = 333

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 83  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 142

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 143 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 202

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 203 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 257



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 189 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 248

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 249 TQVGNWF 255


>gi|359320644|ref|XP_538477.4| PREDICTED: homeobox protein SIX3 [Canis lupus familiaris]
          Length = 580

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 86  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 145

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 146 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 205

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 206 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 260



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 192 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 251

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 252 TQVGNWF 258


>gi|1542811|dbj|BAA11823.1| Six3b [Mus musculus]
          Length = 330

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 80  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 139

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 140 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 199

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 200 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 254



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 186 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 245

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 246 TQVGNWF 252


>gi|148706660|gb|EDL38607.1| sine oculis-related homeobox 3 homolog (Drosophila) [Mus musculus]
          Length = 301

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 51  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 110

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 111 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 170

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 171 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 225



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 157 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 216

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 217 TQVGNWF 223


>gi|13027452|ref|NP_076480.1| homeobox protein SIX3 [Rattus norvegicus]
 gi|9836574|dbj|BAB11848.1| homeobox protein Six3 [Rattus norvegicus]
          Length = 337

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 87  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 146

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 147 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 206

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 207 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 261



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 193 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 252

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 253 TQVGNWF 259


>gi|126303913|ref|XP_001375682.1| PREDICTED: homeobox protein SIX3-like [Monodelphis domestica]
          Length = 333

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 83  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 142

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 143 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 202

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 203 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 257



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 189 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 248

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 249 TQVGNWF 255


>gi|62948139|gb|AAH94426.1| Six3 protein [Mus musculus]
          Length = 347

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 83  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 142

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 143 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 202

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 203 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 257



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 189 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 248

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 249 TQVGNWF 255


>gi|348574662|ref|XP_003473109.1| PREDICTED: homeobox protein SIX3-like [Cavia porcellus]
          Length = 320

 Score =  267 bits (682), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 70  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 129

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 130 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 189

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 190 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 244



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 176 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 235

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 236 TQVGNWF 242


>gi|363583678|gb|AEW27306.1| SIX homeobox 3 [Columba livia]
          Length = 279

 Score =  267 bits (682), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 47  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 106

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 107 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 166

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 167 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 221



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 153 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 212

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 213 TQVGNWF 219


>gi|301608435|ref|XP_002933781.1| PREDICTED: homeobox protein SIX4-like [Xenopus (Silurana)
           tropicalis]
          Length = 737

 Score =  267 bits (682), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 138/175 (78%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           +  F+ E VACVCE LQQ G+++RL RFL SLP  E L  NES+LKA+A+V FH+G + +
Sbjct: 67  TLAFSPEHVACVCEALQQGGDLDRLSRFLCSLPHSELLRGNESILKARALVTFHQGRYSE 126

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           L+ +LESH F P NH  LQ LW KA Y+EAEK RGRPLGAV KYR+RRKFPLPRTIWDGE
Sbjct: 127 LFLLLESHNFHPSNHAALQELWYKARYIEAEKARGRPLGAVDKYRLRRKFPLPRTIWDGE 186

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKEKSR+ L++ Y HN YPSP  KR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 187 ETVYCFKEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSLTQVSNWFKNRRQRDR 241



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y HN YPSP  KR LA+ TGL+ 
Sbjct: 167 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSL 226

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 227 TQVSNWF 233


>gi|126282522|ref|XP_001369291.1| PREDICTED: homeobox protein SIX6-like [Monodelphis domestica]
 gi|395510197|ref|XP_003759367.1| PREDICTED: homeobox protein SIX6 [Sarcophilus harrisii]
          Length = 246

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|7446268|pir||S74256 homeotic protein six3-alpha - mouse
 gi|1542809|dbj|BAA11822.1| Six3a [Mus musculus]
          Length = 284

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/190 (68%), Positives = 163/190 (85%), Gaps = 4/190 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 83  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 142

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 143 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 202

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRRQRD
Sbjct: 203 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 262

Query: 390 RAAEQKDGSV 399
           RAA  K+ SV
Sbjct: 263 RAAAAKNRSV 272



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 189 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 248

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 249 TQVGNWFKN 257


>gi|164521687|gb|ABY60729.1| Six3 [Euperipatoides kanangrensis]
          Length = 284

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 122/182 (67%), Positives = 153/182 (84%), Gaps = 6/182 (3%)

Query: 209 SISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKA 262
           S+ P+  LP+  FT  QVA VCE L++SG+IERLGRFLWSLP     C +L+KNESVL+A
Sbjct: 24  SLPPMFQLPTLNFTTAQVANVCETLEESGDIERLGRFLWSLPVAHPNCAELNKNESVLRA 83

Query: 263 KAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVR 322
           +A+VA+H GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR
Sbjct: 84  RALVAYHTGNFRDLYHILENHRFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVR 143

Query: 323 RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 382
           +KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWF
Sbjct: 144 KKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWF 203

Query: 383 KN 384
           KN
Sbjct: 204 KN 205



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 137 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 196

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 197 TQVGNWF 203


>gi|148226350|ref|NP_001079171.1| SIX homeobox 3 [Xenopus laevis]
 gi|7532815|gb|AAF63242.1|AF183571_1 homeobox transcription factor Six3 [Xenopus laevis]
 gi|213623370|gb|AAI69654.1| Six3 protein [Xenopus laevis]
 gi|213623376|gb|AAI69660.1| Six3 protein [Xenopus laevis]
          Length = 291

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LPS  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 40  LPSLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 99

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY +LE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 100 TGNFRELYLLLENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 159

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 160 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 214



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 146 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 205

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 206 TQVGNWF 212


>gi|301630567|ref|XP_002944388.1| PREDICTED: homeobox protein SIX3-like, partial [Xenopus (Silurana)
           tropicalis]
          Length = 230

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LPS  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 44  LPSLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 210 TQVGNWFKN 218


>gi|5734083|gb|AAD49844.1|AF141651_1 homeobox containing transcription factor SIX6 [Homo sapiens]
 gi|6138946|gb|AAF04402.1|AF031648_1 homeodomain protein OPTX2 [Homo sapiens]
 gi|4128027|emb|CAA09773.1| Six9 protein [Homo sapiens]
 gi|62739238|gb|AAH69413.2| SIX homeobox 6 [Homo sapiens]
 gi|167773477|gb|ABZ92173.1| SIX homeobox 6 [synthetic construct]
          Length = 246

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 150/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|431912721|gb|ELK14739.1| Homeobox protein SIX3 [Pteropus alecto]
          Length = 220

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/190 (68%), Positives = 163/190 (85%), Gaps = 4/190 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 4   LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRRQRD
Sbjct: 124 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 183

Query: 390 RAAEQKDGSV 399
           RAA  K+ SV
Sbjct: 184 RAAAAKNRSV 193



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 66/87 (75%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSSANITSSPNTSTSTASISP 212
           TQV NWF +         + + + + P
Sbjct: 170 TQVGNWFKNRRQRDRAAAAKNRSVVGP 196


>gi|4138225|emb|CAA09775.1| Six9 protein [Mus musculus]
          Length = 246

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 150/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|109102952|ref|XP_001108191.1| PREDICTED: homeobox protein SIX3-like [Macaca mulatta]
          Length = 360

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 113 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 172

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 173 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 232

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 233 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 287



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 219 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 278

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 279 TQVGNWF 285


>gi|56788968|gb|AAH87852.1| SIX6 protein [Homo sapiens]
          Length = 298

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 56  LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 115

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 116 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 175

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 176 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 230



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 162 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 221

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 222 TQVGNWF 228


>gi|41351380|gb|AAH65831.1| SIX6 protein [Homo sapiens]
          Length = 305

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 63  LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 122

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 123 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 182

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 183 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 237



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 169 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 228

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 229 TQVGNWF 235


>gi|410035168|ref|XP_525749.4| PREDICTED: homeobox protein SIX3 [Pan troglodytes]
          Length = 282

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 13  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 72

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 73  TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 132

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 133 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 187



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 119 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 178

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 179 TQVGNWF 185


>gi|441662594|ref|XP_003262904.2| PREDICTED: uncharacterized protein LOC100601037 [Nomascus
           leucogenys]
          Length = 551

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 102 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 161

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 162 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 221

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 222 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 276



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 208 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 267

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 268 TQVGNWF 274


>gi|344273863|ref|XP_003408738.1| PREDICTED: homeobox protein SIX6-like [Loxodonta africana]
          Length = 246

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|45384516|ref|NP_990325.1| homeobox protein SIX6 [Gallus gallus]
 gi|25091262|sp|O93307.1|SIX6_CHICK RecName: Full=Homeobox protein SIX6; AltName: Full=Optic homeobox
           2; AltName: Full=Sine oculis homeobox homolog 6;
           AltName: Full=Six9 protein
 gi|3513524|gb|AAC33851.1| Optx2 [Gallus gallus]
 gi|4127852|emb|CAA09774.1| Six9 protein [Gallus gallus]
          Length = 246

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|165928922|gb|ABY74502.1| Six3 [Strigamia maritima]
          Length = 281

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERLGRFLWSLP     C +L+KNESVL+A+A+VAFH
Sbjct: 22  LPTLNFTATQVAAVCETLEESGDIERLGRFLWSLPVAHPNCAELNKNESVLRARALVAFH 81

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+ +D+Y+ILESH+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 82  AGHLRDMYQILESHRFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 141

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CF+E++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 142 TIWDGEQKTHCFRERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 196



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CF+E++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 128 VDKYRVRKKFPLPRTIWDGEQKTHCFRERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 187

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 188 TQVGNWF 194


>gi|403269584|ref|XP_003926803.1| PREDICTED: homeobox protein SIX3 [Saimiri boliviensis boliviensis]
          Length = 313

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 47  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 106

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 107 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 166

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 167 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 221



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 153 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 212

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 213 TQVGNWF 219


>gi|186910311|ref|NP_031400.2| homeobox protein SIX6 [Homo sapiens]
 gi|332842369|ref|XP_522870.3| PREDICTED: homeobox protein SIX6 [Pan troglodytes]
 gi|397523325|ref|XP_003831685.1| PREDICTED: homeobox protein SIX6 [Pan paniscus]
 gi|115502450|sp|O95475.2|SIX6_HUMAN RecName: Full=Homeobox protein SIX6; AltName: Full=Homeodomain
           protein OPTX2; AltName: Full=Optic homeobox 2; AltName:
           Full=Sine oculis homeobox homolog 6
 gi|119601188|gb|EAW80782.1| sine oculis homeobox homolog 6 (Drosophila) [Homo sapiens]
          Length = 246

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|351713869|gb|EHB16788.1| Homeobox protein SIX6 [Heterocephalus glaber]
          Length = 341

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 99  LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 158

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 159 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 218

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 219 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 273



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 205 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 264

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 265 TQVGNWF 271


>gi|202957446|emb|CAR66435.1| six3 protein [Platynereis dumerilii]
          Length = 366

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 156/200 (78%), Gaps = 11/200 (5%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFH 269
           LP+  FT +QVA VCE L++SG++ERLGRFLWSL A    CE L+KNES+L+A+ +VAFH
Sbjct: 4   LPTLHFTPQQVAQVCETLEESGDVERLGRFLWSLTANPMACEALNKNESILRARCLVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNFKDLY ILE+H+FS  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFKDLYHILENHKFSRDSHAKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN----- 384
           TIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN     
Sbjct: 124 TIWDGEQKTHCFKERTRNLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNRRQRD 183

Query: 385 --RRQRDRAAEQKDGSVHSF 402
                ++R      G+ HS 
Sbjct: 184 RAAAAKNRMNGHSSGASHSM 203



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPTKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|147902517|ref|NP_001081933.1| SIX homeobox 6 [Xenopus laevis]
 gi|5708382|gb|AAD47356.1|AF081352_1 homeobox protein Optx2 [Xenopus laevis]
 gi|213626604|gb|AAI69705.1| Homeobox protein Optx2 [Xenopus laevis]
 gi|213626606|gb|AAI69707.1| Homeobox protein Optx2 [Xenopus laevis]
          Length = 244

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 121/175 (69%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKDSHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|449496320|ref|XP_002193827.2| PREDICTED: homeobox protein SIX3 [Taeniopygia guttata]
          Length = 345

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 69  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 128

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 129 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 188

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 189 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 243



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 175 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 234

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 235 TQVGNWF 241


>gi|426377084|ref|XP_004055306.1| PREDICTED: homeobox protein SIX6 [Gorilla gorilla gorilla]
          Length = 246

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|357622768|gb|EHJ74165.1| hypothetical protein KGM_20665 [Danaus plexippus]
          Length = 381

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 120/178 (67%), Positives = 142/178 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F  EQV CVCE LQQ G+IE+L  FLWSLP  E L  NE+VL+A+A+VA+HRG F++L
Sbjct: 163 LNFNSEQVQCVCEALQQKGDIEKLAAFLWSLPPSELLRGNETVLRARALVAYHRGVFQEL 222

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILE+H FSP +H  LQ LW KAHY EA+K+RGRPLGAV KYR+R+K+PLP+TIWDGEE
Sbjct: 223 YAILETHTFSPRHHTDLQNLWFKAHYKEAQKVRGRPLGAVDKYRLRKKYPLPKTIWDGEE 282

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           T YCFKEKSR+ L+D Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDR  +Q
Sbjct: 283 TVYCFKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQ 340



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EKR LA+ TGLT 
Sbjct: 262 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTL 321

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 322 TQVSNWFKN 330


>gi|391344687|ref|XP_003746627.1| PREDICTED: homeobox protein SIX6-like [Metaseiulus occidentalis]
          Length = 286

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 150/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFH 269
           LP+  F+ +QVA VCE L++SG+IERLGRFLWSLP     C +L+++ESVL+A+A+VAFH
Sbjct: 89  LPTLNFSVQQVAAVCETLEESGDIERLGRFLWSLPVAHPNCAELNRDESVLRARALVAFH 148

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILESH+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 149 SGNFRELYAILESHRFTKSSHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 208

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 209 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 263



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 195 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 254

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 255 TQVGNWF 261


>gi|224051865|ref|XP_002200636.1| PREDICTED: homeobox protein SIX6 [Taeniopygia guttata]
          Length = 246

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|449278504|gb|EMC86326.1| Homeobox protein SIX6, partial [Columba livia]
          Length = 222

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 8   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 67

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 68  TGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 127

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 128 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 182



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 114 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 173

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 174 TQVGNWFKN 182


>gi|335280337|ref|XP_003121893.2| PREDICTED: homeobox protein SIX6-like [Sus scrofa]
          Length = 325

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 121/185 (65%), Positives = 155/185 (83%), Gaps = 5/185 (2%)

Query: 205 TSTASISPI-LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESV 259
           T++ ++S   LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESV
Sbjct: 73  TASGAVSMFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESV 132

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKY 319
           L+A+A+VAFH GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KY
Sbjct: 133 LRARAIVAFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKY 192

Query: 320 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVS 379
           RVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV 
Sbjct: 193 RVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVG 252

Query: 380 NWFKN 384
           NWFKN
Sbjct: 253 NWFKN 257



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 189 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 248

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 249 TQVGNWF 255


>gi|208967418|dbj|BAG73723.1| SIX homeobox 3 [synthetic construct]
          Length = 332

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 150/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 82  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 141

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 142 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 201

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K ELA+ATGLT TQV NWFKN
Sbjct: 202 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKCELAQATGLTPTQVGNWFKN 256



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K ELA+ATGLT 
Sbjct: 188 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKCELAQATGLTP 247

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 248 TQVGNWF 254


>gi|410929387|ref|XP_003978081.1| PREDICTED: homeobox protein SIX3-like [Takifugu rubripes]
          Length = 260

 Score =  264 bits (674), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 154/190 (81%), Gaps = 6/190 (3%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC------EKLHKNESVLKAKAMV 266
           + P   FT +QVA VCE L+++G+IERLGRFLWSLPA       E L+++ESV++A+A+V
Sbjct: 1   MFPLPMFTPDQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESVMRARALV 60

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH GNF  LY+IL++H+F+  +H KLQ LWL AHY EAE+LRGRPLG V KYR+R+KFP
Sbjct: 61  AFHGGNFDALYQILQTHRFTRESHSKLQELWLDAHYREAERLRGRPLGPVEKYRIRKKFP 120

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT TQV NWFKNRR
Sbjct: 121 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR 180

Query: 387 QRDRAAEQKD 396
           QRDRAA  K+
Sbjct: 181 QRDRAASAKN 190



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT 
Sbjct: 110 VEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|1143519|emb|CAA62379.1| SIX3 protein [Mus musculus]
          Length = 352

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 105 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPWPPGACEAINKHESILRARAVVAFH 164

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 165 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 224

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 225 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 279



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 211 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 270

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 271 TQVGNWFKN 279


>gi|432936893|ref|XP_004082331.1| PREDICTED: homeobox protein SIX6-like [Oryzias latipes]
          Length = 245

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEVLNKNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKESHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|348531172|ref|XP_003453084.1| PREDICTED: homeobox protein SIX6-like [Oreochromis niloticus]
          Length = 245

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEVLNKNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKESHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|41055462|ref|NP_957399.1| sine oculis-related homeobox 6a [Danio rerio]
 gi|31418747|gb|AAH53123.1| Sine oculis-related homeobox 6a [Danio rerio]
          Length = 245

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    AC+ L KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACDVLGKNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  AGNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|47230134|emb|CAG10548.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 245

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEVLNKNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKESHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|18859371|ref|NP_571429.1| sine oculis homeobox homolog 7 [Danio rerio]
 gi|3337445|gb|AAC32188.1| homeobox protein Six7 [Danio rerio]
 gi|40555751|gb|AAH64701.1| Sine oculis homeobox homolog 7 [Danio rerio]
          Length = 256

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 123/190 (64%), Positives = 155/190 (81%), Gaps = 6/190 (3%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC------EKLHKNESVLKAKAMV 266
           + P   FT EQVA VCE L+++G+IERLGRFLWSLPA       E L+++ESV++A+A+V
Sbjct: 1   MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGELLNRHESVMRARALV 60

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH GNF+ LY+IL+SH+F+  +H KLQ LWL AHY EAE+LRGRPLG V KYR+R+KFP
Sbjct: 61  AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP 120

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT TQV NWFKNRR
Sbjct: 121 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR 180

Query: 387 QRDRAAEQKD 396
           QRDRAA  K+
Sbjct: 181 QRDRAASAKN 190



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT 
Sbjct: 110 VEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|355778643|gb|EHH63679.1| hypothetical protein EGM_16693 [Macaca fascicularis]
          Length = 246

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|355693328|gb|EHH27931.1| hypothetical protein EGK_18248 [Macaca mulatta]
          Length = 246

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|410898070|ref|XP_003962521.1| PREDICTED: homeobox protein SIX6-like [Takifugu rubripes]
          Length = 245

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEVLNKNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKESHTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|348520262|ref|XP_003447647.1| PREDICTED: homeobox protein SIX3-like [Oreochromis niloticus]
          Length = 319

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 155/190 (81%), Gaps = 6/190 (3%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC------EKLHKNESVLKAKAMV 266
           + P   FT +QVA VCE L+++G+IERLGRFLWSLPA       E L+++ES+++A+A+V
Sbjct: 60  MFPLPMFTPDQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESIMRARALV 119

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH GNF+ LY+IL+SH+F+  +H KLQ LWL AHY EAE+LRGRPLG V KYR+R+KFP
Sbjct: 120 AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP 179

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT TQV NWFKNRR
Sbjct: 180 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR 239

Query: 387 QRDRAAEQKD 396
           QRDRAA  K+
Sbjct: 240 QRDRAASAKN 249



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT 
Sbjct: 169 VEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTP 228

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 229 TQVGNWF 235


>gi|348573549|ref|XP_003472553.1| PREDICTED: homeobox protein SIX6-like [Cavia porcellus]
          Length = 246

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILETHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|432920669|ref|XP_004079977.1| PREDICTED: homeobox protein SIX3-like [Oryzias latipes]
          Length = 259

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 122/190 (64%), Positives = 155/190 (81%), Gaps = 6/190 (3%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC------EKLHKNESVLKAKAMV 266
           + P   FT +QVA VCE L+++G+IERLGRFLWSLPA       E L+++ESV++A+A+V
Sbjct: 1   MFPLPMFTPDQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESVMRARALV 60

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH GNF+ LY+IL+SH+F+  +H KLQ LWL AHY EAE+LRGRPLG V KYR+R+KFP
Sbjct: 61  AFHVGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP 120

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT TQV NWFKNRR
Sbjct: 121 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR 180

Query: 387 QRDRAAEQKD 396
           QRDRAA  K+
Sbjct: 181 QRDRAASAKN 190



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 1/96 (1%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT 
Sbjct: 110 VEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTP 169

Query: 186 TQVSNWFSSANITSSPNTSTSTASISP-ILPSFGFT 220
           TQV NWF +        ++ +     P +LPS G T
Sbjct: 170 TQVGNWFKNRRQRDRAASAKNRLQQDPSLLPSEGST 205


>gi|402876358|ref|XP_003901939.1| PREDICTED: homeobox protein SIX6 [Papio anubis]
          Length = 246

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|410962396|ref|XP_003987756.1| PREDICTED: homeobox protein SIX6 [Felis catus]
          Length = 246

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|301754475|ref|XP_002913074.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX6-like
           [Ailuropoda melanoleuca]
          Length = 245

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|47210789|emb|CAF91099.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 264

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 154/190 (81%), Gaps = 6/190 (3%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC------EKLHKNESVLKAKAMV 266
           + P   FT +QVA VCE L+++G+IERLGRFLWSLPA       E L+++ESV++A+A+V
Sbjct: 5   MFPLPMFTPDQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESVMRARALV 64

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AFH GNF  LY+IL++H+F+  +H KLQ LWL AHY EAE+LRGRPLG V KYR+R+KFP
Sbjct: 65  AFHGGNFDALYQILQAHRFTRESHSKLQELWLDAHYREAERLRGRPLGPVEKYRIRKKFP 124

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT TQV NWFKNRR
Sbjct: 125 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR 184

Query: 387 QRDRAAEQKD 396
           QRDRAA  K+
Sbjct: 185 QRDRAASAKN 194



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P  KR LA+ATGLT 
Sbjct: 114 VEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTP 173

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 174 TQVGNWF 180


>gi|332237242|ref|XP_003267813.1| PREDICTED: homeobox protein SIX6 [Nomascus leucogenys]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|196051133|gb|ACG68734.1| optix [Parhyale hawaiensis]
          Length = 543

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/187 (63%), Positives = 154/187 (82%), Gaps = 4/187 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LPS  FT  QVA VCE L++SG+IERLGRFLWSLP      + L+K+E+V++A+A+VAFH
Sbjct: 35  LPSLSFTATQVAAVCETLEESGDIERLGRFLWSLPVAHPHLKDLNKHEAVIRARALVAFH 94

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ++E ++F+  ++P+LQALWL++HY EAE+LRGRPLG V KYRVR+KFP PR
Sbjct: 95  LGNFRELYSLIECNRFTRASYPRLQALWLESHYQEAERLRGRPLGPVDKYRVRKKFPFPR 154

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           TIWDGE+ S+CFKE++RS+LR+ Y  +PYP+P  KRELA+AT LT TQV NWFKNRRQRD
Sbjct: 155 TIWDGEQKSHCFKERTRSLLREAYLQDPYPNPSRKRELAQATTLTPTQVGNWFKNRRQRD 214

Query: 390 RAAEQKD 396
           RAA  K+
Sbjct: 215 RAAAIKN 221



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP PRTIWDGE+ S+CFKE++RS+LR+ Y  +PYP+P  KRELA+AT LT 
Sbjct: 141 VDKYRVRKKFPFPRTIWDGEQKSHCFKERTRSLLREAYLQDPYPNPSRKRELAQATTLTP 200

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 201 TQVGNWF 207


>gi|405969921|gb|EKC34864.1| Homeobox protein SIX3 [Crassostrea gigas]
          Length = 265

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  FT +QVA VCE L++SG+IERLGRFLWSLP    ACE L+K+ESVL+A+A+V+FH
Sbjct: 4   LPTLHFTPQQVAQVCETLEESGDIERLGRFLWSLPVNPSACEALNKHESVLRARALVSFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN++DLY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNYRDLYHILEHHKFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRNLLREWYLQDPYPNPTKKRELASATGLTPTQVGNWFKN 178



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPTKKRELASATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|354500552|ref|XP_003512363.1| PREDICTED: homeobox protein SIX6-like [Cricetulus griseus]
 gi|344247359|gb|EGW03463.1| Homeobox protein SIX6 [Cricetulus griseus]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|259013340|ref|NP_001158378.1| SIX homeobox 3 [Saccoglossus kowalevskii]
 gi|32307769|gb|AAP79281.1| six3 [Saccoglossus kowalevskii]
          Length = 252

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFH 269
           LP+  F+  QVA VCE L++SG+IERL RFLWSLP     CE L+KNESVL+A+A+V FH
Sbjct: 4   LPTLNFSPLQVASVCETLEESGDIERLARFLWSLPVAPGTCEALNKNESVLRARAVVTFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
           +GNF++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  QGNFRELYNILENHKFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 178



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|345804445|ref|XP_547840.3| PREDICTED: homeobox protein SIX6 [Canis lupus familiaris]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|390469142|ref|XP_002807285.2| PREDICTED: homeobox protein SIX6 [Callithrix jacchus]
 gi|403264348|ref|XP_003924448.1| PREDICTED: homeobox protein SIX6 [Saimiri boliviensis boliviensis]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|50841486|gb|AAT69264.1| homeobox protein sine oculis six 1/2 [Haliclona sp. DKJ-2004]
          Length = 148

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 118/147 (80%), Positives = 136/147 (92%)

Query: 249 ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
           ACE++ KNESVLKAKA++AFH+GNF +LYRI+E + F+P +HPK+Q LWL+AHY+EAE+L
Sbjct: 1   ACEQIQKNESVLKAKALIAFHQGNFPELYRIIELNSFTPESHPKMQQLWLQAHYIEAERL 60

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RG+PLGAVGKYR+RRKFPLPRTIWDGEETSYCFKEKSR VLR WYT NPYPSPREKR+LA
Sbjct: 61  RGKPLGAVGKYRIRRKFPLPRTIWDGEETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLA 120

Query: 369 EATGLTTTQVSNWFKNRRQRDRAAEQK 395
           E TGLTTTQVSNWFKNRRQRDRA+E K
Sbjct: 121 EQTGLTTTQVSNWFKNRRQRDRASETK 147



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 63/69 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEETSYCFKEKSR VLR WYT NPYPSPREKR+LAE TGLTT
Sbjct: 68  VGKYRIRRKFPLPRTIWDGEETSYCFKEKSRVVLRQWYTKNPYPSPREKRQLAEQTGLTT 127

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 128 TQVSNWFKN 136


>gi|291406527|ref|XP_002719589.1| PREDICTED: SIX homeobox 3 [Oryctolagus cuniculus]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|240849269|ref|NP_001155330.1| homeobox protein SIX6 [Ovis aries]
 gi|238477339|gb|ACR43481.1| sine oculis homeobox 6 [Ovis aries]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|431904449|gb|ELK09832.1| Homeobox protein SIX6 [Pteropus alecto]
          Length = 246

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHSKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|332029789|gb|EGI69658.1| Homeobox protein SIX4 [Acromyrmex echinatior]
          Length = 264

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 157/209 (75%), Gaps = 2/209 (0%)

Query: 187 QVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWS 246
           Q S   S+ N ++S NT+ S  S  P L S  FT EQ++C+CE L QS +IE+L RFLWS
Sbjct: 57  QYSQEISTCN-SASVNTNISNISSLP-LSSSNFTPEQISCMCEALSQSQDIEKLSRFLWS 114

Query: 247 LPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
           LP  E L   ESVL A+A VAFHRG + +LY ILESH FSP  HP+LQ +W K+HY EAE
Sbjct: 115 LPPGELLRGGESVLMARAAVAFHRGAYHELYSILESHPFSPRRHPELQQMWFKSHYREAE 174

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           K+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ 
Sbjct: 175 KIRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKESYMRNRYPTPDEKKN 234

Query: 367 LAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           LA+ TGLT TQVSNWFKNRRQRDR  + +
Sbjct: 235 LAKKTGLTLTQVSNWFKNRRQRDRTPQTR 263



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT 
Sbjct: 184 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKESYMRNRYPTPDEKKNLAKKTGLTL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|193580188|ref|XP_001942738.1| PREDICTED: homeobox protein SIX5-like [Acyrthosiphon pisum]
          Length = 359

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 148/199 (74%), Gaps = 5/199 (2%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+ EQV+C+CE LQQSG+++RL RFLW LP  E L   E+VL+A+A+VAFHR  F +
Sbjct: 53  SLSFSSEQVSCMCEALQQSGDVDRLARFLWYLPPSELLRGQETVLRARALVAFHRNAFHE 112

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILES  F   +H +LQ LW KAHY+EAEK+RGR LGAV KYR+R+K+PLP+TIWDGE
Sbjct: 113 LYAILESQSFDSRHHLQLQQLWFKAHYLEAEKIRGRSLGAVDKYRLRKKYPLPKTIWDGE 172

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ET YCFKEKSR+ L+D Y  N YP+P EKRELA  TGLT TQVSNWFKNRRQRDR  +Q 
Sbjct: 173 ETVYCFKEKSRNALKDCYLKNRYPTPDEKRELARRTGLTLTQVSNWFKNRRQRDRTPQQ- 231

Query: 396 DGSVHSFRVNIGGDSKTQY 414
               HS  ++IG      Y
Sbjct: 232 ----HSDLLSIGSSDSRNY 246



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EKRELA  TGLT 
Sbjct: 153 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLKNRYPTPDEKRELARRTGLTL 212

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 213 TQVSNWF 219


>gi|440910224|gb|ELR60041.1| Homeobox protein SIX6, partial [Bos grunniens mutus]
          Length = 274

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 32  LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 91

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 92  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 151

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 152 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 206



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 138 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|6755524|ref|NP_035514.1| homeobox protein SIX6 [Mus musculus]
 gi|157820289|ref|NP_001101502.1| homeobox protein SIX6 [Rattus norvegicus]
 gi|25091281|sp|Q9QZ28.2|SIX6_MOUSE RecName: Full=Homeobox protein SIX6; AltName: Full=Optic homeobox
           2; AltName: Full=Sine oculis homeobox homolog 6;
           AltName: Full=Six9 protein
 gi|5731996|gb|AAD48911.1|AF135267_1 homeobox protein SIX6 [Mus musculus]
 gi|3513522|gb|AAC33850.1| homeodomain protein [Mus musculus]
 gi|26325266|dbj|BAC26387.1| unnamed protein product [Mus musculus]
 gi|148704570|gb|EDL36517.1| sine oculis-related homeobox 6 homolog (Drosophila) [Mus musculus]
 gi|149051431|gb|EDM03604.1| sine oculis-related homeobox 6 homolog (Drosophila) (predicted)
           [Rattus norvegicus]
 gi|187953025|gb|AAI38840.1| Sine oculis-related homeobox 6 homolog (Drosophila) [Mus musculus]
 gi|187954087|gb|AAI38839.1| Sine oculis-related homeobox 6 homolog (Drosophila) [Mus musculus]
          Length = 246

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|109083902|ref|XP_001094228.1| PREDICTED: homeobox protein SIX6-like [Macaca mulatta]
          Length = 396

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 154 LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 213

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 214 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 273

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 274 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 328



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 260 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 319

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 320 TQVGNWF 326


>gi|148233070|ref|NP_001079186.1| SIX homeobox 3, gene 2 [Xenopus laevis]
 gi|27503891|gb|AAH42277.1| Six6-A protein [Xenopus laevis]
          Length = 244

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESV++A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVIRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY I+E H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRDLYHIVEHHKFTKESHMKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGL+ TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPGKKRELAQATGLSATQVGNWFKN 178



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGL+ 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPGKKRELAQATGLSA 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|426233482|ref|XP_004010746.1| PREDICTED: homeobox protein SIX4 [Ovis aries]
          Length = 780

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/174 (67%), Positives = 136/174 (78%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 104 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 163

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP  +  W KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 164 YSILESHSFESANHPLREEXWYKARYPEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 223

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 224 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 277



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 203 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 262

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 263 TQVSNWF 269


>gi|322789489|gb|EFZ14769.1| hypothetical protein SINV_09236 [Solenopsis invicta]
          Length = 270

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 147/196 (75%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FT EQ++C+CE L QS +IERL RFLWSLP  E L  NESVL A+A VAFHRG + +LY 
Sbjct: 71  FTPEQISCMCEALSQSQDIERLARFLWSLPPGELLRGNESVLMARAAVAFHRGAYHELYS 130

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILESH FSP  HP+LQ +W K+HY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET 
Sbjct: 131 ILESHPFSPRRHPELQQMWFKSHYREAEKIRGRPLGAVDKYRLRKKYPLPKTIWDGEETV 190

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  + +   
Sbjct: 191 YCFKERSRNALKECYMRNRYPTPDEKKNLAKKTGLTLTQVSNWFKNRRQRDRTPQARTAE 250

Query: 399 VHSFRVNIGGDSKTQY 414
           +     N+      +Y
Sbjct: 251 LLRAESNLNSKINKEY 266



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT 
Sbjct: 168 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYMRNRYPTPDEKKNLAKKTGLTL 227

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 228 TQVSNWF 234


>gi|395843462|ref|XP_003794502.1| PREDICTED: homeobox protein SIX6 [Otolemur garnettii]
          Length = 377

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 135 LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 194

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 195 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 254

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 255 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 309



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 241 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 300

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 301 TQVGNWF 307


>gi|348534783|ref|XP_003454881.1| PREDICTED: homeobox protein SIX1-like [Oreochromis niloticus]
          Length = 230

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/187 (68%), Positives = 143/187 (76%), Gaps = 3/187 (1%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH---KNESVLKAKAMVAFHRGNFKD 275
           FT EQV CVCEVL QSG I+RL  FL +LP         + ESVLKAKA VAFH+G F D
Sbjct: 3   FTAEQVTCVCEVLLQSGCIDRLASFLRTLPPASSSSCPGELESVLKAKAAVAFHQGRFSD 62

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY +LE   FSP +HP LQ LWL+AHY+EAE+ RGRPLGAVGKYRVRRKFPLP TIWDGE
Sbjct: 63  LYTLLEGFPFSPRSHPLLQQLWLQAHYIEAERQRGRPLGAVGKYRVRRKFPLPNTIWDGE 122

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ETSYCFKEKSRS+LR+WY   PYPS REKRELA ATGLT  QVSNWFKNRRQRDR    +
Sbjct: 123 ETSYCFKEKSRSILREWYHRKPYPSTREKRELAAATGLTAIQVSNWFKNRRQRDRITGSR 182

Query: 396 DGSVHSF 402
             S  ++
Sbjct: 183 GPSEQAY 189



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLP TIWDGEETSYCFKEKSRS+LR+WY   PYPS REKRELA ATGLT 
Sbjct: 103 VGKYRVRRKFPLPNTIWDGEETSYCFKEKSRSILREWYHRKPYPSTREKRELAAATGLTA 162

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 163 IQVSNWF 169


>gi|426223737|ref|XP_004006030.1| PREDICTED: homeobox protein SIX3 [Ovis aries]
          Length = 313

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 118/176 (67%), Positives = 150/176 (85%), Gaps = 4/176 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A A+VAFH
Sbjct: 63  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRAAAVVAFH 122

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 123 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 182

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           TIW+ E+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 183 TIWESEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 238



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIW+ E+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 169 VDKYRVRKKFPLPRTIWESEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 228

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 229 TQVGNWF 235


>gi|313906877|gb|ADR83537.1| Six3 [Patiria miniata]
          Length = 266

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 149/177 (84%), Gaps = 4/177 (2%)

Query: 212 PILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVA 267
           P LP+  FT  Q+A VCE L++SG+++RL RFLWSLP     CE L+KNESVL+A+++V+
Sbjct: 9   PTLPTLSFTPAQIASVCETLEESGDVDRLARFLWSLPVAPGTCEALNKNESVLRARSVVS 68

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           FH+GNF++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPL
Sbjct: 69  FHQGNFRELYHILENHRFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPL 128

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 129 PRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAHATGLTPTQVGNWFKN 185



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 117 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAHATGLTP 176

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 177 TQVGNWF 183


>gi|348600221|dbj|BAK93300.1| homeobox protein SIX3 [Parasteatoda tepidariorum]
          Length = 362

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/177 (67%), Positives = 149/177 (84%), Gaps = 4/177 (2%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAF 268
            LP+  F+  QVA VCE L+ SG+IERLGRFLWSLP     C +L+KNESVL+A+A+VAF
Sbjct: 25  FLPTLNFSINQVAAVCETLEDSGDIERLGRFLWSLPVAHPNCAELNKNESVLRARALVAF 84

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           H GNF++LY ILESH+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+K+PLP
Sbjct: 85  HTGNFRELYGILESHRFTKVSHSKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKYPLP 144

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           RTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 145 RTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNR 201



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+PLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 132 VDKYRVRKKYPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 191

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 192 TQVGNWF 198


>gi|154147575|ref|NP_001093696.1| SIX homeobox 6 [Xenopus (Silurana) tropicalis]
 gi|134024105|gb|AAI35853.1| six6 protein [Xenopus (Silurana) tropicalis]
          Length = 244

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  ++ KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  TGNFRELYHILENHKFTKDSYTKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|281349353|gb|EFB24937.1| hypothetical protein PANDA_000847 [Ailuropoda melanoleuca]
          Length = 252

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 65  LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 124

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 125 GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 184

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 185 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 239



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 171 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 230

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 231 TQVGNWF 237


>gi|241602752|ref|XP_002405217.1| SIX/SINE homebox transcription factor, putative [Ixodes scapularis]
 gi|215500587|gb|EEC10081.1| SIX/SINE homebox transcription factor, putative [Ixodes scapularis]
          Length = 206

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/176 (66%), Positives = 150/176 (85%), Gaps = 4/176 (2%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAF 268
           +LP+  F+  QVA VCE L++SG++ERLGRFLWSLP     C +L+K+E+VL+A+A+VAF
Sbjct: 18  MLPTLNFSVSQVAAVCETLEESGDVERLGRFLWSLPVAHPNCAELNKSEAVLRARALVAF 77

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           H GNF++LYRILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLP
Sbjct: 78  HAGNFRELYRILEGHRFARGSHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLP 137

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           RTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 138 RTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 193



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 125 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 184

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 185 TQVGNWFKN 193


>gi|321465022|gb|EFX76026.1| hypothetical protein DAPPUDRAFT_107399 [Daphnia pulex]
          Length = 273

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 126/192 (65%), Positives = 162/192 (84%), Gaps = 4/192 (2%)

Query: 212 PILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVA 267
           P LP+  F+  QVA VCE L++SG+IERLGRFLWSLP       +L+K+E+VL+A+A+VA
Sbjct: 63  PALPTLNFSVSQVATVCETLEESGDIERLGRFLWSLPVAHPNIGELNKSEAVLRARALVA 122

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           +H GN+++LY I+ESH+F+  +H KLQA+WL+AHY+EAEKLRGRPLG V KYRVR+KFPL
Sbjct: 123 YHMGNYRELYHIVESHRFTKDSHGKLQAMWLEAHYLEAEKLRGRPLGPVDKYRVRKKFPL 182

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRRQ
Sbjct: 183 PRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNRRQ 242

Query: 388 RDRAAEQKDGSV 399
           RDRAA  K+ SV
Sbjct: 243 RDRAAAAKNRSV 254



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 171 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 230

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 231 TQVGNWF 237


>gi|355693332|gb|EHH27935.1| hypothetical protein EGK_18252 [Macaca mulatta]
          Length = 780

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/174 (67%), Positives = 135/174 (77%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 105 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 164

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 165 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 224

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVS   KNRRQRDR
Sbjct: 225 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSTGLKNRRQRDR 278



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 204 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 263

Query: 186 TQVSNWF 192
           TQVS   
Sbjct: 264 TQVSTGL 270


>gi|307205328|gb|EFN83676.1| Homeobox protein SIX4 [Harpegnathos saltator]
          Length = 267

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 120/185 (64%), Positives = 147/185 (79%), Gaps = 5/185 (2%)

Query: 216 SFG-----FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHR 270
           SFG     FT EQ++C+CE L QS +IE+L RFLWSLP  E LH +ESVL A+A VAFHR
Sbjct: 82  SFGGTTSNFTPEQISCMCEALSQSQDIEKLSRFLWSLPPGELLHGSESVLMARAAVAFHR 141

Query: 271 GNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT 330
           G++ +LY ILESH FSP  HP+LQ +W K+HY EAEK+RGRPLGAV KYR+R+K+PLP+T
Sbjct: 142 GSYHELYSILESHPFSPRRHPELQQMWFKSHYREAEKIRGRPLGAVDKYRLRKKYPLPKT 201

Query: 331 IWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           IWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR
Sbjct: 202 IWDGEETVYCFKERSRNALKECYMKNRYPTPDEKKNLAKKTGLTLTQVSNWFKNRRQRDR 261

Query: 391 AAEQK 395
             + +
Sbjct: 262 TPQTR 266



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT 
Sbjct: 187 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYMKNRYPTPDEKKNLAKKTGLTL 246

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 247 TQVSNWF 253


>gi|66472580|ref|NP_001018421.1| sine oculis-related homeobox 6b [Danio rerio]
 gi|63101837|gb|AAH95226.1| Sine oculis-related homeobox 6b [Danio rerio]
          Length = 245

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 150/176 (85%), Gaps = 4/176 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L++NESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEVLNRNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL++HY EAEKLRGRPLG V KYRVR+KFPLP+
Sbjct: 64  TGNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLGPVDKYRVRKKFPLPK 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 179



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP+TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPKTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 170 TQVGNWF 176


>gi|156389434|ref|XP_001634996.1| predicted protein [Nematostella vectensis]
 gi|156222085|gb|EDO42933.1| predicted protein [Nematostella vectensis]
          Length = 182

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 124/176 (70%), Positives = 143/176 (81%), Gaps = 1/176 (0%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPA-CEKLHKNESVLKAKAMVAFHRGNFKDLY 277
           F+ EQ+  VCE LQ SGNIERL RFLWSLP   E++H  E++L AKA+VAFH+ NFK+LY
Sbjct: 3   FSMEQIISVCECLQNSGNIERLARFLWSLPKDSEEIHACETILVAKAVVAFHQNNFKELY 62

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            ILES +F    H KLQ LW  AHY+EAE++RGRPLGAVGKYRVRRKFPLPRTIWDGEET
Sbjct: 63  SILESRKFQRSEHEKLQCLWRTAHYIEAERVRGRPLGAVGKYRVRRKFPLPRTIWDGEET 122

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           +YCFKEKSRS+L   Y  +PYP+PREK ELA+ T LT TQVSNWFKN+RQR RAAE
Sbjct: 123 TYCFKEKSRSILNKAYVDSPYPTPREKHELAKMTDLTVTQVSNWFKNKRQRVRAAE 178



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 57/67 (85%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYRVRRKFPLPRTIWDGEET+YCFKEKSRS+L   Y  +PYP+PREK ELA+ T LT TQ
Sbjct: 103 KYRVRRKFPLPRTIWDGEETTYCFKEKSRSILNKAYVDSPYPTPREKHELAKMTDLTVTQ 162

Query: 188 VSNWFSS 194
           VSNWF +
Sbjct: 163 VSNWFKN 169


>gi|115681495|ref|XP_781616.2| PREDICTED: uncharacterized protein LOC576184 [Strongylocentrotus
           purpuratus]
          Length = 565

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 112/174 (64%), Positives = 143/174 (82%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ +QV CVCE L+Q GNI+RL RFLW+LPA E L  +E+VL+A+A VA+H+G++K+L
Sbjct: 93  LSFSAQQVVCVCEALRQEGNIDRLARFLWTLPADETLQNDETVLRARAAVAYHQGHYKEL 152

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y +L++H F+P  H +LQ LW +AHY E+EKLRGRPLGAV KYR+RRK PLPRTIWDGEE
Sbjct: 153 YNLLQNHNFNPAFHTELQDLWYQAHYKESEKLRGRPLGAVDKYRIRRKHPLPRTIWDGEE 212

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
            +YCFKEKSR++L++ Y  N YP+P EKR LA+ TGLT TQ+SNWFKNRRQRD+
Sbjct: 213 MAYCFKEKSRNMLKECYKQNRYPTPDEKRNLAKVTGLTMTQISNWFKNRRQRDK 266



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK PLPRTIWDGEE +YCFKEKSR++L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 192 VDKYRIRRKHPLPRTIWDGEEMAYCFKEKSRNMLKECYKQNRYPTPDEKRNLAKVTGLTM 251

Query: 186 TQVSNWF 192
           TQ+SNWF
Sbjct: 252 TQISNWF 258


>gi|444728562|gb|ELW69012.1| Homeobox protein SIX6 [Tupaia chinensis]
          Length = 246

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN ++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNCRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|293631907|gb|ADE59460.1| sine oculis homeobox-like protein 3 [Metacrinus rotundus]
          Length = 278

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 147/177 (83%), Gaps = 4/177 (2%)

Query: 212 PILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVA 267
           P  P+  F+  Q+A VCE L++SG+IERL RFLWSLP     CE L K+ESVL+A+A+V+
Sbjct: 33  PAFPTLSFSPGQIASVCETLEESGDIERLARFLWSLPVAPGTCEALSKHESVLRARAVVS 92

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           FH+GNF++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPL
Sbjct: 93  FHQGNFRELYHILENHRFTKESHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPL 152

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 153 PRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAHATGLTPTQVGNWFKN 209



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 141 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAHATGLTP 200

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 201 TQVGNWF 207


>gi|72005242|ref|XP_781696.1| PREDICTED: homeobox protein SIX6-like [Strongylocentrotus
           purpuratus]
          Length = 324

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFH 269
           LP+  F+  Q+A VCE L++SG+IERL RFLWSLP     CE L KNESVL+A+A+V+FH
Sbjct: 69  LPTLCFSPTQIASVCETLEESGDIERLARFLWSLPVAPGTCEALSKNESVLRARAVVSFH 128

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
           +GN+++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 129 QGNYRELYHILENHRFTKDSHAKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 188

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 189 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 243



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 175 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 234

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 235 TQVGNWF 241


>gi|327280039|ref|XP_003224762.1| PREDICTED: homeobox protein SIX6-like [Anolis carolinensis]
          Length = 296

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 147/175 (84%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L +NESVL+A+A+VAFH
Sbjct: 4   LPLLNFSAQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALSRNESVLRARAVVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+F++LY ILESH+F   +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGHFRELYHILESHKFPKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPGKKRELAQATGLTPTQVGNWFKN 178



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPGKKRELAQATGLTP 169

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 170 TQVGNWFKN 178


>gi|307182948|gb|EFN69948.1| Homeobox protein SIX4 [Camponotus floridanus]
          Length = 429

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 141/177 (79%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           FT EQ++C+CE L QS +IE+L RFLWSLP  E L   ESVL A+A VAFHRG + +LY 
Sbjct: 87  FTPEQISCMCEALSQSQDIEKLSRFLWSLPPGELLRGGESVLMARAAVAFHRGAYHELYS 146

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILESH FSP  HP+LQ +W K+HY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET 
Sbjct: 147 ILESHPFSPRRHPELQQMWFKSHYREAEKIRGRPLGAVDKYRLRKKYPLPKTIWDGEETV 206

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  + +
Sbjct: 207 YCFKERSRNALKECYMRNRYPTPDEKKNLAKKTGLTLTQVSNWFKNRRQRDRTPQTR 263



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ LA+ TGLT 
Sbjct: 184 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYMRNRYPTPDEKKNLAKKTGLTL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|215509407|gb|EEC18860.1| protein sine oculis, putative [Ixodes scapularis]
          Length = 271

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/172 (69%), Positives = 140/172 (81%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE LQQ+ N++RL RFLWSLP  + LH NE+VL+A+A VAFHRGN+K+LY 
Sbjct: 94  FSLEQVACVCEALQQAKNLDRLARFLWSLPPGDLLHANEAVLRAQAAVAFHRGNYKELYT 153

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILE H F+P  H +LQ +W KAHY EAEK+RGR LGAV KYR+RRK+PLP+TIWDGE+T 
Sbjct: 154 ILEGHNFNPRYHNELQQMWYKAHYREAEKIRGRQLGAVDKYRLRRKYPLPKTIWDGEDTV 213

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKEKSR  L++ Y HN YP+P EKR L   TGLT TQVSNWFKNRRQRDR
Sbjct: 214 YCFKEKSRVALKECYKHNRYPTPDEKRTLVNKTGLTFTQVSNWFKNRRQRDR 265



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP+TIWDGE+T YCFKEKSR  L++ Y HN YP+P EKR L   TGLT 
Sbjct: 191 VDKYRLRRKYPLPKTIWDGEDTVYCFKEKSRVALKECYKHNRYPTPDEKRTLVNKTGLTF 250

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 251 TQVSNWFKN 259


>gi|348600223|dbj|BAK93301.1| homeobox protein SIX3 [Parasteatoda tepidariorum]
          Length = 362

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 150/177 (84%), Gaps = 4/177 (2%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAF 268
           +LP+  FT  QVA VCE L++SG+IERLGRFLWSLP     C +L+KNE+VL+A+A+VAF
Sbjct: 18  VLPTLNFTVNQVAAVCETLEESGDIERLGRFLWSLPVAHPNCSELNKNEAVLRARALVAF 77

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           H G+F++LY ILESH+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+K+PLP
Sbjct: 78  HTGSFRELYHILESHRFTKASHTKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKYPLP 137

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           RTI DGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 138 RTIGDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNR 194



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+PLPRTI DGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 125 VDKYRVRKKYPLPRTIGDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 184

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 185 TQVGNWF 191


>gi|157125891|ref|XP_001654439.1| six/sine homebox transcription factors [Aedes aegypti]
 gi|108873504|gb|EAT37729.1| AAEL010327-PA [Aedes aegypti]
          Length = 300

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 163/241 (67%), Gaps = 12/241 (4%)

Query: 163 YTHNPYP-SPREKRELAEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPS----- 216
           Y  N YP   + + E+A  TG   ++        N+    N      +I P L +     
Sbjct: 22  YNENVYPIKVQSQSEVAYFTGKAVSE----HQPTNVRDGTNNVQFLQNIPPQLNNNDVDR 77

Query: 217 --FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
               F+ EQ+ C+CE LQQ G+IE+L  FLWS+P  E +  NES+L+A+ MVA+HRG F 
Sbjct: 78  KILSFSPEQIQCMCEALQQQGDIEKLATFLWSIPQNELISSNESLLRARCMVAYHRGAFH 137

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY +LESH +SP +HP LQ LW KAHY EAEK+RGR LGAV KYR+R+K+PLP+TIWDG
Sbjct: 138 ELYALLESHFYSPKHHPDLQNLWFKAHYREAEKVRGRLLGAVDKYRLRKKYPLPKTIWDG 197

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           EET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  + 
Sbjct: 198 EETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQA 257

Query: 395 K 395
           +
Sbjct: 258 R 258



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 60/73 (82%)

Query: 122 IIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 181
           ++  + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ T
Sbjct: 175 LLGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKT 234

Query: 182 GLTTTQVSNWFSS 194
           GLT TQVSNWF +
Sbjct: 235 GLTLTQVSNWFKN 247


>gi|144369378|dbj|BAF56232.1| Six-A [Coeloplana willeyi]
          Length = 268

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 121/195 (62%), Positives = 153/195 (78%), Gaps = 2/195 (1%)

Query: 203 TSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP--ACEKLHKNESVL 260
           T      I    P F F+ EQVA VC+ L+ SG+I+RL RFLWSLP    E+ +KNE +L
Sbjct: 24  TFQDETGIPTTFPPFSFSVEQVASVCDSLEASGDIDRLARFLWSLPLSQMEEFNKNEKIL 83

Query: 261 KAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR 320
           +++A+V+FHR +F++LY I+E+ +F   +H KLQ LW +AHY+EAEKLRGRPLGAV KYR
Sbjct: 84  RSRAVVSFHRQDFRELYSIIENCRFKKSSHEKLQYLWNEAHYMEAEKLRGRPLGAVDKYR 143

Query: 321 VRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSN 380
           VR+KFPLPRTIWDG+  ++CFKEKSR++L++WY+ NPYPSP  KRELA+A GLT TQVSN
Sbjct: 144 VRKKFPLPRTIWDGKIQNHCFKEKSRNILKEWYSKNPYPSPHTKRELADAAGLTPTQVSN 203

Query: 381 WFKNRRQRDRAAEQK 395
           WFKNRRQRDRAA  K
Sbjct: 204 WFKNRRQRDRAAISK 218



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDG+  ++CFKEKSR++L++WY+ NPYPSP  KRELA+A GLT 
Sbjct: 139 VDKYRVRKKFPLPRTIWDGKIQNHCFKEKSRNILKEWYSKNPYPSPHTKRELADAAGLTP 198

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 199 TQVSNWF 205


>gi|432096680|gb|ELK27263.1| Homeobox protein SIX6 [Myotis davidii]
          Length = 237

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 116/167 (69%), Positives = 145/167 (86%), Gaps = 4/167 (2%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLY 277
           +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH GN+++LY
Sbjct: 3   KQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHGGNYRELY 62

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ 
Sbjct: 63  HILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQK 122

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 123 THCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 169



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 101 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 160

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 161 TQVGNWF 167


>gi|312381801|gb|EFR27458.1| hypothetical protein AND_05828 [Anopheles darlingi]
          Length = 433

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 117/193 (60%), Positives = 147/193 (76%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           F F+ EQ+ C+CE LQQ G++E+L  FLWSL   + +  NES+L+A+A+VA+HRG + +L
Sbjct: 209 FSFSPEQIQCMCEALQQEGDLEKLATFLWSLSPSDLISGNESLLRARALVAYHRGLYHEL 268

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y +LESH FSP  HP LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEE
Sbjct: 269 YAVLESHFFSPKYHPDLQTLWFKAHYREAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEE 328

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           T YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  +   
Sbjct: 329 TVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQSSR 388

Query: 397 GSVHSFRVNIGGD 409
             +    + +G D
Sbjct: 389 PDLMMSVLPVGPD 401



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT 
Sbjct: 308 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTL 367

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 368 TQVSNWF 374


>gi|24308522|ref|NP_571438.1| sine oculis homeobox homolog 3b [Danio rerio]
 gi|3047419|gb|AAC27449.1| homeobox protein Six6 [Danio rerio]
 gi|3336988|dbj|BAA31752.1| Six3 [Danio rerio]
 gi|37590313|gb|AAH59425.1| Sine oculis homeobox homolog 3b [Danio rerio]
          Length = 293

 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    AC+ ++K+ES+ +A+A+VA+H
Sbjct: 44  LPTLNFSAEQVASVCETLEETGDIERLGRFLWSLPVAPGACDAINKHESIQRARAVVAYH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+F++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGSFRELYHILETHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRGLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|444301779|gb|AGD98926.1| Six3/6 [Nematostella vectensis]
          Length = 243

 Score =  257 bits (656), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  F+  Q+A VCE L++SG++ERL RFLWSLP      E L K+ESVL+A+A+VAFH
Sbjct: 5   LPALSFSAHQIAQVCETLEESGDVERLARFLWSLPVAPGTLEALGKHESVLRARAIVAFH 64

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFPLPR
Sbjct: 65  MGNFRDLYHILETHRFTRESHAKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPR 124

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 125 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 179



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 111 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 170

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 171 TQVGNWF 177


>gi|350297797|gb|AEQ28355.1| Six4, partial [Polyodon spathula]
          Length = 533

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 132/163 (80%)

Query: 228 CEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
           CE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH G +++LY ILE+  F+P
Sbjct: 1   CEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHHGRYQELYSILENQSFTP 60

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
            NH  LQ LW KA Y EAEK RGRPLGAV KYR+RRK+PLPRTIWDGEET YCFKE+SR+
Sbjct: 61  SNHSSLQDLWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKERSRN 120

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
            L++ Y HN YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 121 ALKELYKHNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDR 163



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKE+SR+ L++ Y HN YPSP EKR LA+ TGL+ 
Sbjct: 89  VDKYRLRRKYPLPRTIWDGEETVYCFKERSRNALKELYKHNRYPSPAEKRNLAKITGLSL 148

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 149 TQVSNWF 155


>gi|144369363|dbj|BAF56228.1| Six-A [Anthopleura japonica]
          Length = 237

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/176 (65%), Positives = 147/176 (83%), Gaps = 4/176 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP   F+ +Q+A VCE L++SG++ERL RFLWSLP      E L K+ESVL+A+A+VAFH
Sbjct: 5   LPMLSFSPQQIAQVCETLEESGDVERLARFLWSLPVAPGTLEALSKHESVLRARAIVAFH 64

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILESH+F+  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFP+PR
Sbjct: 65  MGNFRDLYHILESHRFTKESHAKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPMPR 124

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 125 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNR 180



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 111 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 170

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 171 TQVGNWFKN 179


>gi|270004898|gb|EFA01346.1| sine oculis-related homeobox 4 [Tribolium castaneum]
          Length = 363

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 140/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S GF+ EQV C+CE L Q G+IERL  FLWSLP  E L  NES+L+A+A VAF+RG++ +
Sbjct: 133 SIGFSPEQVQCMCEALHQRGDIERLATFLWSLPPSELLRGNESILRARAAVAFYRGSYHE 192

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILESH F+   H +LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGE
Sbjct: 193 LYSILESHAFNQRWHAELQTLWFKAHYNEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGE 252

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L++ Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDR
Sbjct: 253 ETVYCFKERSRNALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR 307



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 233 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYARNRYPTPDEKRALAKRTGLTL 292

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 293 TQVSNWF 299


>gi|158287589|ref|XP_309580.4| AGAP011065-PA [Anopheles gambiae str. PEST]
 gi|157019724|gb|EAA05081.4| AGAP011065-PA [Anopheles gambiae str. PEST]
          Length = 270

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 119/192 (61%), Positives = 147/192 (76%), Gaps = 2/192 (1%)

Query: 204 STSTASISPILPS--FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLK 261
            +S   I P L    F F+ EQ+ C+CE LQQ G++E+L  FLWSL   + +  NES+L+
Sbjct: 33  GSSNGPIGPDLERKCFSFSPEQIQCMCEALQQEGDLEKLATFLWSLSPSDLISGNESLLR 92

Query: 262 AKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRV 321
           A+A+VA+HRG + +LY +LESH FSP  H  LQALW KAHY EAEK+RGRPLGAV KYR+
Sbjct: 93  ARALVAYHRGLYHELYAVLESHFFSPKYHADLQALWFKAHYREAEKVRGRPLGAVDKYRL 152

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNW 381
           R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT TQVSNW
Sbjct: 153 RKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTLTQVSNW 212

Query: 382 FKNRRQRDRAAE 393
           FKNRRQRDR  +
Sbjct: 213 FKNRRQRDRTPQ 224



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 6/93 (6%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT 
Sbjct: 147 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTL 206

Query: 186 TQVSNWFSS------ANITSSPNTSTSTASISP 212
           TQVSNWF +         +S P+   S   ++P
Sbjct: 207 TQVSNWFKNRRQRDRTPQSSRPDLMMSVLPVTP 239


>gi|449278506|gb|EMC86328.1| Homeobox protein SIX4, partial [Columba livia]
          Length = 682

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 114/174 (65%), Positives = 133/174 (76%), Gaps = 4/174 (2%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES++KA+A+VAFH+G + +L
Sbjct: 10  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPPSDLLRGNESLMKARALVAFHQGIYAEL 69

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y      RGRPLGAV KYR+RRK+PLPRTIWDGEE
Sbjct: 70  YSILESHNFDSSNHPLLQELWYKARYTA----RGRPLGAVDKYRLRRKYPLPRTIWDGEE 125

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           T YCFKEKSR+ L++ Y  N YPSP  KR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 126 TVYCFKEKSRNALKELYKQNRYPSPAAKRNLAKITGLSLTQVSNWFKNRRQRDR 179



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP  KR LA+ TGL+ 
Sbjct: 105 VDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAAKRNLAKITGLSL 164

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 165 TQVSNWF 171


>gi|310769604|gb|ADP21385.1| Six2 [Ovis aries]
          Length = 130

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 117/130 (90%), Positives = 125/130 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           +LP+FGFTQEQVA VCEVLQQ GNIERLGRFLWSLPACE LHKNESVLKAKA+VAFHRGN
Sbjct: 1   MLPTFGFTQEQVAYVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGN 60

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY+ILESHQFSPHNH KLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPR+IW
Sbjct: 61  FRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIW 120

Query: 333 DGEETSYCFK 342
           DGEETSYCFK
Sbjct: 121 DGEETSYCFK 130



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/27 (88%), Positives = 26/27 (96%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFK 152
           + KYRVRRKFPLPR+IWDGEETSYCFK
Sbjct: 104 VGKYRVRRKFPLPRSIWDGEETSYCFK 130


>gi|156360691|ref|XP_001625159.1| predicted protein [Nematostella vectensis]
 gi|156211978|gb|EDO33059.1| predicted protein [Nematostella vectensis]
          Length = 192

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  F+  Q+A VCE L++SG++ERL RFLWSLP      E L K+ESVL+A+A+VAFH
Sbjct: 5   LPALSFSAHQIAQVCETLEESGDVERLARFLWSLPVAPGTLEALGKHESVLRARAIVAFH 64

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFPLPR
Sbjct: 65  MGNFRDLYHILETHRFTRESHAKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPR 124

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 125 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 179



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 111 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 170

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 171 TQVGNWFKN 179


>gi|295798062|emb|CBL87028.1| six4 protein [Tribolium castaneum]
          Length = 319

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 140/175 (80%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S GF+ EQV C+CE L Q G+IERL  FLWSLP  E L  NES+L+A+A VAF+RG++ +
Sbjct: 89  SIGFSPEQVQCMCEALHQRGDIERLATFLWSLPPSELLRGNESILRARAAVAFYRGSYHE 148

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           LY ILESH F+   H +LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGE
Sbjct: 149 LYSILESHAFNQRWHAELQTLWFKAHYNEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGE 208

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           ET YCFKE+SR+ L++ Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDR
Sbjct: 209 ETVYCFKERSRNALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR 263



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 189 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYARNRYPTPDEKRALAKRTGLTL 248

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 249 TQVSNWF 255


>gi|347970800|ref|XP_003436640.1| AGAP003871-PC [Anopheles gambiae str. PEST]
 gi|347970802|ref|XP_559661.3| AGAP003871-PA [Anopheles gambiae str. PEST]
 gi|333466837|gb|EAL41355.3| AGAP003871-PA [Anopheles gambiae str. PEST]
 gi|333466839|gb|EGK96395.1| AGAP003871-PC [Anopheles gambiae str. PEST]
          Length = 598

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 145/175 (82%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP       +L ++E+VL+A+A+VA+H
Sbjct: 34  LPTLNFTASQVATVCETLEESGDIERLARFLWSLPVAHPNVTELDRSEAVLRARAIVAYH 93

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+F++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 94  TGHFRELYSILERHKFTKTSHGKLQAMWLEAHYHEAEKLRGRPLGPVDKYRVRKKFPLPR 153

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 154 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 208



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 140 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 199

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 200 TQVGNWF 206


>gi|443732540|gb|ELU17224.1| hypothetical protein CAPTEDRAFT_180297 [Capitella teleta]
          Length = 314

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 147/185 (79%), Gaps = 6/185 (3%)

Query: 218 GFTQEQVACVCEVLQQSGNIERLGRFLWSLP------ACEKLHKNESVLKAKAMVAFHRG 271
           G +  QV  VCE L++SG++ERL RFLWSLP      +     + E+VL+A+A+VAFH G
Sbjct: 63  GLSSSQVTQVCETLEESGDVERLARFLWSLPPPGPGLSSSDPARCEAVLRARALVAFHAG 122

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF++LY +LESH+FS  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTI
Sbjct: 123 NFRELYALLESHKFSKDSHSKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTI 182

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           WDGE+ S+CFKE++R  LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNRRQRDRA
Sbjct: 183 WDGEQKSHCFKERTRHHLREWYLQDPYPNPAKKRELAAATGLTPTQVGNWFKNRRQRDRA 242

Query: 392 AEQKD 396
           A  K+
Sbjct: 243 AAVKN 247



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ S+CFKE++R  LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 167 VDKYRVRKKFPLPRTIWDGEQKSHCFKERTRHHLREWYLQDPYPNPAKKRELAAATGLTP 226

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 227 TQVGNWF 233


>gi|158287585|ref|XP_001237244.2| AGAP011067-PA [Anopheles gambiae str. PEST]
 gi|157019722|gb|EAU77547.2| AGAP011067-PA [Anopheles gambiae str. PEST]
          Length = 224

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 119/192 (61%), Positives = 147/192 (76%), Gaps = 2/192 (1%)

Query: 204 STSTASISPILPS--FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLK 261
            +S   I P L    F F+ EQ+ C+CE LQQ G++E+L  FLWSL   + +  NES+L+
Sbjct: 29  GSSNGPIGPDLERKCFSFSPEQIQCMCEALQQEGDLEKLATFLWSLSPSDLISGNESLLR 88

Query: 262 AKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRV 321
           A+A+VA+HRG + +LY +LESH FSP  H  LQALW KAHY EAEK+RGRPLGAV KYR+
Sbjct: 89  ARALVAYHRGLYHELYAVLESHFFSPKYHADLQALWFKAHYREAEKVRGRPLGAVDKYRL 148

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNW 381
           R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT TQVSNW
Sbjct: 149 RKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTLTQVSNW 208

Query: 382 FKNRRQRDRAAE 393
           FKNRRQRDR  +
Sbjct: 209 FKNRRQRDRTPQ 220



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT 
Sbjct: 143 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTL 202

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 203 TQVSNWF 209


>gi|121544132|gb|ABM55679.1| sine oculis homeobox homolog 3 [Carassius auratus]
 gi|121544134|gb|ABM55680.1| sine oculis homeobox homolog 3 [Carassius auratus]
          Length = 293

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 149/175 (85%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    AC+ ++K+ES+ +A+A+VA+H
Sbjct: 44  LPTLNFSAEQVASVCETLEETGDIERLGRFLWSLPVAPGACDSINKHESIQRARAVVAYH 103

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+F++LY ILE+++F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 104 TGSFRELYHILENYKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 163

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 164 TIWDGEQKTHCFKERTRGLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 150 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPSKKRELAQATGLTP 209

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 210 TQVGNWF 216


>gi|374277730|gb|AEZ03831.1| Six3/6, partial [Terebratalia transversa]
          Length = 348

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 145/175 (82%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
            P   F+  Q+A VCE L++SG+IERLGRFLWSLP    A E L+K+ES+L+A+A+VA+H
Sbjct: 38  FPMLNFSPTQIAQVCETLEESGDIERLGRFLWSLPINPAAHEALNKHESILRARALVAYH 97

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGR LG V KYRVR+KFPLPR
Sbjct: 98  TGNFRNLYHILENHRFTKDSHAKLQAMWLEAHYQEAEKLRGRSLGPVDKYRVRKKFPLPR 157

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 158 TIWDGEQKTHCFKERTRGLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 212



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 144 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPTKKRELAQATGLTP 203

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 204 TQVGNWF 210


>gi|197359128|gb|ACH69780.1| sine oculis homeobox-like protein 3a [Anabarilius grahami]
          Length = 238

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 112/162 (69%), Positives = 142/162 (87%), Gaps = 4/162 (2%)

Query: 227 VCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+
Sbjct: 1   VCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILEN 60

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 61  HKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFK 120

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           E++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 121 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 162



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 94  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 153

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 154 TQVGNWF 160


>gi|170068005|ref|XP_001868701.1| six/sine homebox transcription factors [Culex quinquefasciatus]
 gi|167864128|gb|EDS27511.1| six/sine homebox transcription factors [Culex quinquefasciatus]
          Length = 321

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 118/198 (59%), Positives = 153/198 (77%), Gaps = 6/198 (3%)

Query: 193 SSANITSSPNTSTSTASISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
            S N   +P       + SP+  LP+  FT  QVA VCE L++SG+IERL RFLWSLP  
Sbjct: 9   GSGNPPQAPVQPHPIIAPSPLFALPTLNFTASQVATVCETLEESGDIERLARFLWSLPVA 68

Query: 251 E----KLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
                +L ++E+VL+A+A+VA+H G+F++LY ILE H+F+  +H KLQA+WL+AHY EAE
Sbjct: 69  HPNVTELDRSEAVLRARAIVAYHTGHFRELYSILERHKFTKSSHGKLQAMWLEAHYHEAE 128

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           KLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRE
Sbjct: 129 KLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRE 188

Query: 367 LAEATGLTTTQVSNWFKN 384
           LA+ATGLT TQV NWFKN
Sbjct: 189 LAQATGLTPTQVGNWFKN 206



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 138 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|343098394|tpg|DAA34947.1| TPA_inf: six-type transcription factor 1/2f [Helobdella robusta]
          Length = 173

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 146/174 (83%), Gaps = 2/174 (1%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F  EQ+AC+CEVL +S +I  L + + +LP  E+  K ESVLKA+A +AFH G+FKDLY+
Sbjct: 1   FNDEQIACLCEVLLRSSDISPLYKLVPTLP--ERAMKVESVLKARAYLAFHSGSFKDLYK 58

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           ILE +QF+P +HP +Q+LW  AHY+EAE++RGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 59  ILEENQFTPSSHPSMQSLWTTAHYLEAERMRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 118

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           YCFK++SR +LRDWY  N YP+P+EKR+LA+ TGL++TQVSNWFKNRRQRDR A
Sbjct: 119 YCFKDRSRILLRDWYAKNQYPNPKEKRDLAKQTGLSSTQVSNWFKNRRQRDRTA 172



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 61/67 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCFK++SR +LRDWY  N YP+P+EKR+LA+ TGL++
Sbjct: 96  VGKYRIRRKYPLPRTIWDGEETSYCFKDRSRILLRDWYAKNQYPNPKEKRDLAKQTGLSS 155

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 156 TQVSNWF 162


>gi|340710920|ref|XP_003394031.1| PREDICTED: hypothetical protein LOC100650676 [Bombus terrestris]
          Length = 474

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP      ++L+++E+VL+A+A+VAFH
Sbjct: 28  LPTLSFTVGQVATVCETLEESGDIERLARFLWSLPVAHPNIQELNQSEAVLRARAIVAFH 87

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 88  SGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 147

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 148 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTPTQVGNWFKN 202



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 193

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 194 TQVGNWF 200


>gi|307206529|gb|EFN84555.1| Homeobox protein SIX3 [Harpegnathos saltator]
          Length = 262

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 118/197 (59%), Positives = 155/197 (78%), Gaps = 7/197 (3%)

Query: 194 SANITSSPNTSTSTASISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC- 250
           + N T+ PN +      +P+  LP+  FT  QVA VCE L++SG+IERL RFLWSLP   
Sbjct: 7   AGNSTAGPNGNGPIVP-APVFALPTLSFTVGQVATVCETLEESGDIERLARFLWSLPVAH 65

Query: 251 ---EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEK 307
              ++L+++E+VL+A+A+VAFH G +++LY ILE H+F+  +H KLQA+WL+AHY EAEK
Sbjct: 66  PNIQELNQSEAVLRARAIVAFHSGQYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEK 125

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKREL 367
           LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KREL
Sbjct: 126 LRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKREL 185

Query: 368 AEATGLTTTQVSNWFKN 384
           A ATGLT TQV NWFKN
Sbjct: 186 ASATGLTPTQVGNWFKN 202



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELASATGLTP 193

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 194 TQVGNWF 200


>gi|350400783|ref|XP_003485959.1| PREDICTED: hypothetical protein LOC100748444 [Bombus impatiens]
          Length = 474

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP      ++L+++E+VL+A+A+VAFH
Sbjct: 28  LPTLSFTVGQVATVCETLEESGDIERLARFLWSLPVAHPNIQELNQSEAVLRARAIVAFH 87

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 88  SGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 147

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 148 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTPTQVGNWFKN 202



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 193

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 194 TQVGNWF 200


>gi|11991851|gb|AAG42359.1|AF276993_1 homeobox protein Six6.2, partial [Xenopus laevis]
          Length = 164

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/164 (70%), Positives = 142/164 (86%), Gaps = 4/164 (2%)

Query: 227 VCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           VCE L++SG+IERLGRFLWSLP    ACE L+KNESV++A+A+VAFH GNF+DLY I+E 
Sbjct: 1   VCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVIRARAIVAFHTGNFRDLYHIVEH 60

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 61  HKFTKESHMKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFK 120

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           E++R +LR+WY  +PYP+P +KRELA+ATGL+ TQV NWFKNRR
Sbjct: 121 ERTRHLLREWYLQDPYPNPGKKRELAQATGLSATQVGNWFKNRR 164



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGL+ 
Sbjct: 94  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPGKKRELAQATGLSA 153

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 154 TQVGNWFKN 162


>gi|193713747|ref|XP_001944833.1| PREDICTED: homeobox protein SIX6-like [Acyrthosiphon pisum]
          Length = 328

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 145/175 (82%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFH 269
           LP   F+  QVA VCE L++SG+IERL RFLWSLP       +L+K+E+VL+A+A+V+FH
Sbjct: 48  LPMLNFSVSQVASVCETLEESGDIERLARFLWSLPVAHPNIVELNKSEAVLRARAIVSFH 107

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN++D+Y ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 108 SGNYRDMYTILEHHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 167

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA+ATGLT TQV NWFKN
Sbjct: 168 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKKELAQATGLTPTQVGNWFKN 222



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA+ATGLT 
Sbjct: 154 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKKELAQATGLTP 213

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 214 TQVGNWF 220


>gi|110751050|ref|XP_623764.2| PREDICTED: hypothetical protein LOC551364 [Apis mellifera]
          Length = 475

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP      ++L+++E+VL+A+A+VAFH
Sbjct: 29  LPTLSFTVNQVATVCETLEESGDIERLARFLWSLPVAHPNIQELNQSEAVLRARAIVAFH 88

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 89  SGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 148

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 149 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTPTQVGNWFKN 203



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 135 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 194

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 195 TQVGNWF 201


>gi|380010955|ref|XP_003689581.1| PREDICTED: uncharacterized protein LOC100866364 [Apis florea]
          Length = 473

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 146/175 (83%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP      ++L+++E+VL+A+A+VAFH
Sbjct: 28  LPTLSFTVGQVATVCETLEESGDIERLARFLWSLPVAHPNIQELNQSEAVLRARAIVAFH 87

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 88  SGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 147

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 148 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTPTQVGNWFKN 202



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 193

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 194 TQVGNWF 200


>gi|11991847|gb|AAG42357.1|AF276991_1 homeobox protein Six3.1, partial [Xenopus laevis]
          Length = 164

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 113/164 (68%), Positives = 144/164 (87%), Gaps = 4/164 (2%)

Query: 227 VCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           VC+ L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+
Sbjct: 1   VCDTLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILEN 60

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 61  HKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFK 120

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           E++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 121 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 164



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 94  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 153

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 154 TQVGNWFKN 162


>gi|383864974|ref|XP_003707952.1| PREDICTED: uncharacterized protein LOC100883606 [Megachile
           rotundata]
          Length = 464

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 119/199 (59%), Positives = 148/199 (74%), Gaps = 3/199 (1%)

Query: 200 SPNTSTSTASISPI---LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKN 256
           S N+ST+  +I+ +     S  FT EQ++C+CE L QS +IE+L RFLWSLP  E L   
Sbjct: 100 STNSSTNIGNIAGLSLGTTSSNFTPEQISCMCEALSQSQDIEKLTRFLWSLPPGELLRGG 159

Query: 257 ESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAV 316
           ESVL A+A VAFHRG + +LY ILESH FSP  H  LQ +W K+HY EAEK+RGRPLGAV
Sbjct: 160 ESVLMARATVAFHRGAYHELYSILESHPFSPRRHQDLQDMWFKSHYREAEKIRGRPLGAV 219

Query: 317 GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 376
            KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L++ Y  N YP+  EK+ LA+ TGLT T
Sbjct: 220 DKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKECYMRNKYPASDEKKNLAKKTGLTLT 279

Query: 377 QVSNWFKNRRQRDRAAEQK 395
           QVSNWFKNRRQRDR  + +
Sbjct: 280 QVSNWFKNRRQRDRTPQTR 298



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L++ Y  N YP+  EK+ LA+ TGLT 
Sbjct: 219 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKECYMRNKYPASDEKKNLAKKTGLTL 278

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 279 TQVSNWF 285


>gi|170044560|ref|XP_001849911.1| six/sine homebox transcription factors [Culex quinquefasciatus]
 gi|167867665|gb|EDS31048.1| six/sine homebox transcription factors [Culex quinquefasciatus]
          Length = 286

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 113/179 (63%), Positives = 142/179 (79%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F  EQ+ C+CE LQQ G++E+L  FLWS+P  E +  NES+L+A+ +VA+HRG+F +L
Sbjct: 69  LNFNPEQIQCMCEALQQQGDVEKLTSFLWSIPQNEIVSNNESLLRARCLVAYHRGSFHEL 128

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y +LESH +SP +H  LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEE
Sbjct: 129 YALLESHFYSPKHHSDLQNLWFKAHYREAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEE 188

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           T YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  + +
Sbjct: 189 TVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQAR 247



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D YT N YP+P EK+ LA+ TGLT 
Sbjct: 168 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYTRNRYPTPDEKKTLAKKTGLTL 227

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 228 TQVSNWFKN 236


>gi|345482090|ref|XP_001607088.2| PREDICTED: hypothetical protein LOC100123443 [Nasonia vitripennis]
          Length = 482

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/199 (58%), Positives = 155/199 (77%), Gaps = 6/199 (3%)

Query: 193 SSANITSSPNTSTSTASISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
           +    T+ P+        SP+  LP+  FT  QV+ VCE L++SG+IERL RFLWSLP  
Sbjct: 7   AGPGATTVPSAGNGPIVPSPVFALPTLSFTVGQVSTVCETLEESGDIERLARFLWSLPVA 66

Query: 251 ----EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
               ++L+++E+VL+A+A+VAFH G++++LY ILE H+F+  +H KLQA+WL+AHY EAE
Sbjct: 67  HPNIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAE 126

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           KLRGRPLG V KYRVR+K+PLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRE
Sbjct: 127 KLRGRPLGPVDKYRVRKKYPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRE 186

Query: 367 LAEATGLTTTQVSNWFKNR 385
           LA ATGLT TQV NWFKNR
Sbjct: 187 LAAATGLTPTQVGNWFKNR 205



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+PLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 136 VDKYRVRKKYPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 195

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 196 TQVGNWF 202


>gi|242014095|ref|XP_002427733.1| Homeobox protein SIX6, putative [Pediculus humanus corporis]
 gi|212512174|gb|EEB14995.1| Homeobox protein SIX6, putative [Pediculus humanus corporis]
          Length = 214

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 115/180 (63%), Positives = 148/180 (82%), Gaps = 6/180 (3%)

Query: 211 SPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKA 264
           SP+  LP+  FT  QVA VCE L++SG+IERL RFLWSLP       +L+KNE+VL+A+A
Sbjct: 22  SPLFALPTLNFTVSQVAAVCETLEESGDIERLARFLWSLPVAHPNISELNKNEAVLRARA 81

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +V+FH G+++++Y ILE H+F   +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+K
Sbjct: 82  IVSFHSGHYREMYSILEHHKFGKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKK 141

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 142 FPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 201



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 133 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 192

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 193 TQVGNWFKN 201


>gi|70571151|dbj|BAE06688.1| transcription factor protein [Ciona intestinalis]
          Length = 456

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 115/186 (61%), Positives = 151/186 (81%), Gaps = 7/186 (3%)

Query: 206 STASISPILP--SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESV 259
           ++ S +P+LP  +  F+  Q+A VCE LQ+SG+IERL RFLWSLPA     E L+ NE V
Sbjct: 69  ASQSPNPLLPFPALTFSPSQIATVCESLQESGDIERLARFLWSLPAAPGVLEVLNTNEVV 128

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEKLRGRPLGAVGK 318
           L+A+A+VAFH+G+++DLY ILE+H+F+  + H KLQA+WL+AHY EA KLRGRPLG V K
Sbjct: 129 LRARAIVAFHQGHYRDLYAILETHRFTEKDSHGKLQAMWLEAHYQEAAKLRGRPLGPVDK 188

Query: 319 YRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           YR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT TQV
Sbjct: 189 YRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLRDPYPNPSKKKELAHATGLTPTQV 248

Query: 379 SNWFKN 384
            NWFKN
Sbjct: 249 GNWFKN 254



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 186 VDKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLRDPYPNPSKKKELAHATGLTP 245

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 246 TQVGNWF 252


>gi|157134757|ref|XP_001656427.1| six/sine homebox transcription factors [Aedes aegypti]
 gi|108884304|gb|EAT48529.1| AAEL000414-PA [Aedes aegypti]
          Length = 219

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 118/198 (59%), Positives = 152/198 (76%), Gaps = 6/198 (3%)

Query: 193 SSANITSSPNTSTSTASISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC 250
            S N    P       + SP+  LP+  FT  QVA VCE L++SG+IERL RFLWSLP  
Sbjct: 9   GSGNPPQIPVQPHPILAPSPLFALPTLNFTASQVATVCETLEESGDIERLARFLWSLPVA 68

Query: 251 E----KLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
                +L ++E+VL+A+A+VA+H G+F++LY ILE H+F+  +H KLQA+WL+AHY EAE
Sbjct: 69  HPNISELDRSEAVLRARAIVAYHTGHFRELYTILERHKFTKSSHGKLQAMWLEAHYHEAE 128

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           KLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRE
Sbjct: 129 KLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRE 188

Query: 367 LAEATGLTTTQVSNWFKN 384
           LA+ATGLT TQV NWFKN
Sbjct: 189 LAQATGLTPTQVGNWFKN 206



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 138 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTP 197

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 198 TQVGNWFKN 206


>gi|156353875|ref|XP_001623134.1| predicted protein [Nematostella vectensis]
 gi|156209800|gb|EDO31034.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 142/174 (81%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           +QVACVC+ L+Q+G+IERL RFLWSLP  + L+ +ESVLKA+A+V+FHRG ++++Y ILE
Sbjct: 1   DQVACVCDALRQAGDIERLSRFLWSLPPDDLLNGSESVLKARAIVSFHRGRYREVYNILE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           +++F P +H  LQ LW KAHY EAEKLRGR LGAV KYR+RRKFPLPRTIWDGEET YCF
Sbjct: 61  TNEFDPSSHELLQCLWYKAHYSEAEKLRGRSLGAVDKYRIRRKFPLPRTIWDGEETVYCF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           KEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWFKNRRQRDR    K
Sbjct: 121 KEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQRDRIPSNK 174



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT 
Sbjct: 95  VDKYRIRRKFPLPRTIWDGEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTL 154

Query: 186 TQVSNWFSS 194
            QVSNWF +
Sbjct: 155 KQVSNWFKN 163


>gi|198423279|ref|XP_002119543.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 406

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/186 (61%), Positives = 151/186 (81%), Gaps = 7/186 (3%)

Query: 206 STASISPILP--SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESV 259
           ++ S +P+LP  +  F+  Q+A VCE LQ+SG+IERL RFLWSLPA     E L+ NE V
Sbjct: 72  ASQSPNPLLPFPALTFSPSQIATVCESLQESGDIERLARFLWSLPAAPGVLEVLNTNEVV 131

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEKLRGRPLGAVGK 318
           L+A+A+VAFH+G+++DLY ILE+H+F+  + H KLQA+WL+AHY EA KLRGRPLG V K
Sbjct: 132 LRARAIVAFHQGHYRDLYAILETHRFTEKDSHGKLQAMWLEAHYQEAAKLRGRPLGPVDK 191

Query: 319 YRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           YR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT TQV
Sbjct: 192 YRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLRDPYPNPSKKKELAHATGLTPTQV 251

Query: 379 SNWFKN 384
            NWFKN
Sbjct: 252 GNWFKN 257



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 189 VDKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLRDPYPNPSKKKELAHATGLTP 248

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 249 TQVGNWF 255


>gi|307187691|gb|EFN72663.1| Homeobox protein SIX3 [Camponotus floridanus]
          Length = 224

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 154/192 (80%), Gaps = 6/192 (3%)

Query: 199 SSPNTSTSTASISPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EK 252
           ++P+ +      +PI  LP+  F+  QVA VCE L++SG+IERL RFLWSLP      ++
Sbjct: 6   TTPSNANGPLVPAPIFALPTLSFSVSQVATVCETLEESGDIERLARFLWSLPVAHPNIQE 65

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRP 312
           L+++E+VL+A+A+VAFH G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRGRP
Sbjct: 66  LNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRGRP 125

Query: 313 LGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATG 372
           LG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATG
Sbjct: 126 LGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATG 185

Query: 373 LTTTQVSNWFKN 384
           LT TQV NWFKN
Sbjct: 186 LTPTQVGNWFKN 197



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 129 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 188

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 189 TQVGNWFKN 197


>gi|11991849|gb|AAG42358.1|AF276992_1 homeobox protein Six3.2, partial [Xenopus laevis]
          Length = 164

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 112/164 (68%), Positives = 144/164 (87%), Gaps = 4/164 (2%)

Query: 227 VCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF++LY +LE+
Sbjct: 1   VCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRELYLLLEN 60

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 61  HKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFK 120

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           E++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 121 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 164



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 94  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 153

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 154 TQVGNWFKN 162


>gi|383850546|ref|XP_003700856.1| PREDICTED: uncharacterized protein LOC100878325 [Megachile
           rotundata]
          Length = 474

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/194 (59%), Positives = 155/194 (79%), Gaps = 7/194 (3%)

Query: 198 TSSPNTSTSTASI-SPI--LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC---- 250
           T +P  +T+   + +P+  LP+  FT  QVA VCE L++SG+IERL RFLWSLP      
Sbjct: 9   TGAPAPTTNGPIVPAPVFALPTLSFTVSQVATVCETLEESGDIERLARFLWSLPVAHPNI 68

Query: 251 EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG 310
           ++L+++E+VL+A+A+VAFH G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKLRG
Sbjct: 69  QELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKLRG 128

Query: 311 RPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEA 370
           R LG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA A
Sbjct: 129 RALGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAA 188

Query: 371 TGLTTTQVSNWFKN 384
           TGLT TQV NWFKN
Sbjct: 189 TGLTPTQVGNWFKN 202



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 193

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 194 TQVGNWF 200


>gi|322782656|gb|EFZ10519.1| hypothetical protein SINV_00102 [Solenopsis invicta]
          Length = 234

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/196 (59%), Positives = 154/196 (78%), Gaps = 5/196 (2%)

Query: 194 SANITSSPNTSTSTASISPI-LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC-- 250
           SA  T+ PN +        + LP+  F+  QVA VCE L++SG+IERL RFLWSLP    
Sbjct: 2   SAAGTTPPNANGPLVPCPYLALPTLSFSVSQVATVCETLEESGDIERLARFLWSLPVAHP 61

Query: 251 --EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
             ++L+++E+VL+A+A+VAFH G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKL
Sbjct: 62  NIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKL 121

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA
Sbjct: 122 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELA 181

Query: 369 EATGLTTTQVSNWFKN 384
            ATGLT TQV NWFKN
Sbjct: 182 AATGLTPTQVGNWFKN 197



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 129 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 188

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 189 TQVGNWF 195


>gi|332016378|gb|EGI57291.1| Homeobox protein SIX3 [Acromyrmex echinatior]
          Length = 235

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/196 (59%), Positives = 154/196 (78%), Gaps = 5/196 (2%)

Query: 194 SANITSSPNTSTSTASISPI-LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC-- 250
           SA  T+ PN +        + LP+  F+  QVA VCE L++SG+IERL RFLWSLP    
Sbjct: 2   SAAGTTPPNANGPLVPCPYLALPTLSFSVSQVATVCETLEESGDIERLARFLWSLPVAHP 61

Query: 251 --EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
             ++L+++E+VL+A+A+VAFH G++++LY ILE H+F+  +H KLQA+WL+AHY EAEKL
Sbjct: 62  NIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEKL 121

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA
Sbjct: 122 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELA 181

Query: 369 EATGLTTTQVSNWFKN 384
            ATGLT TQV NWFKN
Sbjct: 182 AATGLTPTQVGNWFKN 197



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 70/99 (70%), Gaps = 2/99 (2%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 129 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRELAAATGLTP 188

Query: 186 TQVSNWFSSANITSSPNTSTSTASISPIL--PSFGFTQE 222
           TQV NWF +         + +   +  I+  P F F ++
Sbjct: 189 TQVGNWFKNRRQRDRAAAAKNRCVVKLIVFFPVFSFIRK 227


>gi|332376553|gb|AEE63416.1| unknown [Dendroctonus ponderosae]
          Length = 360

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 153/209 (73%), Gaps = 7/209 (3%)

Query: 194 SANITS--SPNTSTSTASISPILPSFG-----FTQEQVACVCEVLQQSGNIERLGRFLWS 246
           +A+I S  + N      S+   + +FG     F+ +QV C+CE LQQ G+++RL  FLW 
Sbjct: 101 AADIFSCGTQNKGKLAESVVLKVDTFGKKAVSFSPDQVQCMCEALQQRGDLDRLATFLWY 160

Query: 247 LPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAE 306
           LP  + L KNES+L+A+A VAFHRG + +LY ILE+H F P  H +LQ LW K+HY EAE
Sbjct: 161 LPETDTLQKNESILRARAAVAFHRGFYHELYAILENHSFHPRWHTELQTLWFKSHYKEAE 220

Query: 307 KLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           K+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ 
Sbjct: 221 KVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYARNRYPTPDEKKA 280

Query: 367 LAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           L++ TGLT TQVSNWFKNRRQRDR  + +
Sbjct: 281 LSKRTGLTLTQVSNWFKNRRQRDRTPQSR 309



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ L++ TGLT 
Sbjct: 230 VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYARNRYPTPDEKKALSKRTGLTL 289

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 290 TQVSNWF 296


>gi|443732541|gb|ELU17225.1| hypothetical protein CAPTEDRAFT_180301 [Capitella teleta]
          Length = 242

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/184 (63%), Positives = 148/184 (80%), Gaps = 6/184 (3%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLP------ACEKLHKNESVLKAKAMVAFHRGN 272
           F+  QV  VCE L++SG++ERL RFLWSLP      +     + E+VL+A+A+VAFH GN
Sbjct: 58  FSSSQVTQVCETLEESGDVERLARFLWSLPPPGPGLSSSDPARCEAVLRARALVAFHAGN 117

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY +LESH+FS  +H KLQA+WL+AHY EAE+LRGRPLG V KYRVR+KFP P +IW
Sbjct: 118 FRELYALLESHKFSKDSHSKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKFPFPCSIW 177

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGE+ S+CFKEK+R++LR+WY  +PYP+P +KRELA+AT LT TQV NWFKNRRQRDRAA
Sbjct: 178 DGEQKSHCFKEKTRNLLREWYLQDPYPNPTKKRELAKATSLTPTQVGNWFKNRRQRDRAA 237

Query: 393 EQKD 396
            QK+
Sbjct: 238 AQKN 241



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP P +IWDGE+ S+CFKEK+R++LR+WY  +PYP+P +KRELA+AT LT 
Sbjct: 161 VDKYRVRKKFPFPCSIWDGEQKSHCFKEKTRNLLREWYLQDPYPNPTKKRELAKATSLTP 220

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 221 TQVGNWF 227


>gi|281349355|gb|EFB24939.1| hypothetical protein PANDA_000849 [Ailuropoda melanoleuca]
          Length = 661

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 111/158 (70%), Positives = 127/158 (80%)

Query: 233 QSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPK 292
           Q GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +LY ILESH F   NHP 
Sbjct: 1   QGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPL 60

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ 
Sbjct: 61  LQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKEL 120

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 121 YKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 158



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 84  VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 143

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 144 TQVSNWF 150


>gi|17559042|ref|NP_504420.1| Protein CEH-33 [Caenorhabditis elegans]
 gi|3023979|sp|Q94166.1|HM33_CAEEL RecName: Full=Homeobox protein ceh-33
 gi|351050079|emb|CCD64165.1| Protein CEH-33 [Caenorhabditis elegans]
          Length = 261

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/180 (64%), Positives = 143/180 (79%), Gaps = 4/180 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           +++EQVAC+CE L  S +  +L +F+W++   +++  N+ +LKA+A +AFH  NFK+LYR
Sbjct: 20  YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           I+ESH F+  +H  LQ  WL AHY EAEK+RGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 78  IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 137

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA--EQKD 396
           YCF++KSR +LRDWY  N YPSPREKRELAE T LT TQVSNWFKNRRQRDRA   E KD
Sbjct: 138 YCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRAGVPEPKD 197



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCF++KSR +LRDWY  N YPSPREKRELAE T LT 
Sbjct: 115 VGKYRIRRKYPLPRTIWDGEETSYCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTV 174

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 175 TQVSNWF 181


>gi|195378624|ref|XP_002048083.1| GJ13766 [Drosophila virilis]
 gi|194155241|gb|EDW70425.1| GJ13766 [Drosophila virilis]
          Length = 391

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 148/201 (73%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S +  S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 159 SNLTAAHNMS-AVGSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTNFLCSLPPSEFFK 217

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 218 TNESVLRARAMVAYNLGQFHELYSLLETHCFSMKYHVDLQNLWFKAHYKEAEKVRGRPLG 277

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 278 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 337

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 338 LTQVSNWFKNRRQRDRTPQQR 358



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 279 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 338

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 339 TQVSNWF 345


>gi|308503825|ref|XP_003114096.1| CRE-CEH-33 protein [Caenorhabditis remanei]
 gi|308261481|gb|EFP05434.1| CRE-CEH-33 protein [Caenorhabditis remanei]
          Length = 597

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 119/197 (60%), Positives = 148/197 (75%), Gaps = 9/197 (4%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           +T+EQVAC+CE L  + +  +L +F+W+    + +  N+ +LKA+A +A+H  NFK+LYR
Sbjct: 58  YTEEQVACICEAL--TNDAGKLSQFVWNTLERDDMRNNQYILKAQAFLAYHSNNFKELYR 115

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           I+E+HQF+  +H  LQ  WL AHY EAEKLRGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 116 IIETHQFASEHHLPLQEWWLNAHYHEAEKLRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 175

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA--EQKD 396
           YCF++KSR +LRDWY  N YPSPREKRELAE T LT TQVSNWFKNRRQRDRA   E KD
Sbjct: 176 YCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRAGLPEGKD 235

Query: 397 GSVHSFRVNIGGDSKTQ 413
                   +IGG  + +
Sbjct: 236 S-----LKDIGGSEEEE 247



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 109/199 (54%), Positives = 138/199 (69%), Gaps = 8/199 (4%)

Query: 218 GFTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
            ++++++ C+CE L     Q+G  E+L  F+++LP C      ES LKA+A+V F   N+
Sbjct: 356 SYSEQEIVCICESLFNEGLQNGRTEQLATFIYNLPQC--YQNMESALKAQALVYFTTQNW 413

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K LYR+LE H+FSPHNH  LQ LWL AHY EAEK + R LGAV KYR+R+K P P TIWD
Sbjct: 414 KSLYRLLECHKFSPHNHTVLQNLWLDAHYKEAEKTKERELGAVCKYRIRKKNPFPNTIWD 473

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEET+YCFK KSR+VLRD Y    YPS  +KR LA+ T L+  QVSNWFKN+RQR+RAA 
Sbjct: 474 GEETNYCFKSKSRNVLRDAYKKCHYPSVDDKRRLAQQTELSIIQVSNWFKNKRQRERAAG 533

Query: 394 QKDGSVHSFRVNIGGDSKT 412
           Q DGS  S R N   D+ +
Sbjct: 534 QLDGS--SARSNDSDDASS 550



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCF++KSR +LRDWY  N YPSPREKRELAE T LT 
Sbjct: 153 VGKYRIRRKYPLPRTIWDGEETSYCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTV 212

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 213 TQVSNWF 219



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 50/67 (74%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K P P TIWDGEET+YCFK KSR+VLRD Y    YPS  +KR LA+ T L+ 
Sbjct: 456 VCKYRIRKKNPFPNTIWDGEETNYCFKSKSRNVLRDAYKKCHYPSVDDKRRLAQQTELSI 515

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 516 IQVSNWF 522


>gi|353232880|emb|CCD80236.1| homeobox protein six-related [Schistosoma mansoni]
          Length = 435

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 142/188 (75%), Gaps = 2/188 (1%)

Query: 207 TASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE-KLHKNESVLKAKAM 265
           T + +P   +F F + Q+ C+CE LQQ G+I+RL  F+ +LP    +LH  E +  AKAM
Sbjct: 162 TTTTTPNDSNF-FNEIQIICICETLQQRGDIDRLELFIQTLPKWNIQLHNLECIQVAKAM 220

Query: 266 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 325
           +AFH   +  LY ILE+  FS   H +LQ LWL+AHY E EK++GR LGAV KYR+RRK+
Sbjct: 221 IAFHHEQYTQLYHILENCNFSSIYHSRLQNLWLRAHYAEEEKIKGRILGAVAKYRIRRKY 280

Query: 326 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           PLP TIWDGEETSYCFKEKSR++LR+WY  NPYPSPR+KR+LAE TGLT TQVSNWFKNR
Sbjct: 281 PLPHTIWDGEETSYCFKEKSRNLLREWYHQNPYPSPRDKRQLAEITGLTITQVSNWFKNR 340

Query: 386 RQRDRAAE 393
           RQRDRA +
Sbjct: 341 RQRDRATD 348



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 63/71 (88%)

Query: 122 IIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 181
           I+  + KYR+RRK+PLP TIWDGEETSYCFKEKSR++LR+WY  NPYPSPR+KR+LAE T
Sbjct: 267 ILGAVAKYRIRRKYPLPHTIWDGEETSYCFKEKSRNLLREWYHQNPYPSPRDKRQLAEIT 326

Query: 182 GLTTTQVSNWF 192
           GLT TQVSNWF
Sbjct: 327 GLTITQVSNWF 337


>gi|195127696|ref|XP_002008304.1| GI11887 [Drosophila mojavensis]
 gi|193919913|gb|EDW18780.1| GI11887 [Drosophila mojavensis]
          Length = 400

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 148/201 (73%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S +  S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 168 SNLTAAHNMS-AVGSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTNFLCSLPPSEFFK 226

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 227 TNESVLRARAMVAYNLGQFHELYSLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 286

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 287 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 346

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 347 LTQVSNWFKNRRQRDRTPQQR 367



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 288 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 347

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 348 TQVSNWF 354


>gi|323652550|gb|ADX98526.1| sine oculis-related homeobox 3 [Coturnix japonica]
          Length = 216

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 113/166 (68%), Positives = 143/166 (86%), Gaps = 4/166 (2%)

Query: 224 VACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRI 279
           VA VCE L+++G+IERLGR LWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY I
Sbjct: 1   VASVCETLEETGDIERLGRSLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHI 60

Query: 280 LESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSY 339
           LE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KF LPRTIWDGE+ ++
Sbjct: 61  LENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFLLPRTIWDGEQKTH 120

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 121 CFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 166



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KF LPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 97  VDKYRVRKKFLLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 156

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 157 TQVGNWF 163


>gi|348508528|ref|XP_003441806.1| PREDICTED: homeobox protein SIX3-like [Oreochromis niloticus]
          Length = 277

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 153/197 (77%), Gaps = 5/197 (2%)

Query: 193 SSANITSSPNTSTSTASISPI-LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC- 250
            S  +T S +   S+ + +P+ LP   F+  Q+A VCE L+++G+IERL RFLWSLP   
Sbjct: 23  GSPVLTRSQSPDDSSGACAPVALPGMCFSAAQIASVCETLEETGDIERLARFLWSLPVTS 82

Query: 251 ---EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEK 307
              + + ++ESV +A+A+VAFH G+F++LY ILE+H+F+  +H KLQA+WL+AHY EAEK
Sbjct: 83  DGRDSISEHESVQRARAVVAFHTGSFRELYHILETHRFTRASHGKLQAMWLEAHYREAEK 142

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKREL 367
           LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KREL
Sbjct: 143 LRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKREL 202

Query: 368 AEATGLTTTQVSNWFKN 384
           A ATGLT TQV NWFKN
Sbjct: 203 AHATGLTPTQVGNWFKN 219



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 151 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTP 210

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 211 TQVGNWF 217


>gi|301754479|ref|XP_002913091.1| PREDICTED: homeobox protein SIX4-like [Ailuropoda melanoleuca]
          Length = 708

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 110/156 (70%), Positives = 126/156 (80%)

Query: 235 GNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQ 294
           GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +LY ILESH F   NHP LQ
Sbjct: 50  GNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQ 109

Query: 295 ALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT 354
            LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y 
Sbjct: 110 QLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYK 169

Query: 355 HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
            N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 170 QNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 205



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 131 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 190

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 191 TQVSNWF 197


>gi|344288882|ref|XP_003416175.1| PREDICTED: hypothetical protein LOC100672458 [Loxodonta africana]
          Length = 523

 Score =  247 bits (631), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           NESVLKAKA+V FH    + L R   SHQFSPHN P    LWLKAHY+EAEKLRGRPLGA
Sbjct: 303 NESVLKAKAVVPFHAAIPRALTRSWRSHQFSPHNTPSCSKLWLKAHYIEAEKLRGRPLGA 362

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           VGKYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 363 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 422

Query: 376 TQVSNWFKNRRQRDRAAEQKD 396
           TQVSNWFKNRRQRDRAAE K+
Sbjct: 423 TQVSNWFKNRRQRDRAAEAKE 443



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPR+IWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 363 VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTT 422

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 423 TQVSNWF 429


>gi|341886564|gb|EGT42499.1| hypothetical protein CAEBREN_29690 [Caenorhabditis brenneri]
          Length = 455

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 115/180 (63%), Positives = 142/180 (78%), Gaps = 4/180 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           ++ EQVAC+CE L  + + ++L +F+W+    E +  N+ +LK++A +A+H  NFK+LYR
Sbjct: 22  YSDEQVACICEAL--TNDAKKLSQFVWNTLEREDMRSNQYILKSQAFLAYHSNNFKELYR 79

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           I+E+HQFS  +H  LQ  WL AHY EAEK+RGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 80  IIETHQFSSEHHLSLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 139

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA--EQKD 396
           YCF++KSR +LRDWY  N YPSPREKRELAE T LT TQVSNWFKNRRQRDRA   E KD
Sbjct: 140 YCFRDKSRILLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRAGVHEGKD 199



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 6/164 (3%)

Query: 219 FTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           ++++++ C+CE L     Q+G  E+L  F+++LP C      ES LKA+A+V F   N+K
Sbjct: 294 YSEQEIVCICESLFNEGLQTGRTEQLAAFIYNLPTC--YQNIESALKAQALVHFTTQNWK 351

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
            LYR+LE H+FSP NH  LQ LWL AHY EAEK + R LGAV KYR+R+K P P TIWDG
Sbjct: 352 MLYRLLECHKFSPQNHTVLQNLWLDAHYKEAEKTKERELGAVCKYRIRKKNPFPNTIWDG 411

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           EET+YCFK KSR+VLRD Y    YPS  EK+ LA  T L+  QV
Sbjct: 412 EETNYCFKSKSRAVLRDAYNKCQYPSVEEKKRLALQTELSIIQV 455



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCF++KSR +LRDWY  N YPSPREKRELAE T LT 
Sbjct: 117 VGKYRIRRKYPLPRTIWDGEETSYCFRDKSRILLRDWYCRNSYPSPREKRELAEKTHLTV 176

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 177 TQVSNWF 183



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 45/63 (71%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K P P TIWDGEET+YCFK KSR+VLRD Y    YPS  EK+ LA  T L+ 
Sbjct: 393 VCKYRIRKKNPFPNTIWDGEETNYCFKSKSRAVLRDAYNKCQYPSVEEKKRLALQTELSI 452

Query: 186 TQV 188
            QV
Sbjct: 453 IQV 455


>gi|195019120|ref|XP_001984913.1| GH14784 [Drosophila grimshawi]
 gi|193898395|gb|EDV97261.1| GH14784 [Drosophila grimshawi]
          Length = 390

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 121/216 (56%), Positives = 155/216 (71%), Gaps = 2/216 (0%)

Query: 181 TGLTTTQVSNWFS-SANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIER 239
           TGL+ T  S+     +N+T++ N S +  S         F+ +Q+ C+CE LQQ G++E+
Sbjct: 143 TGLSGTGASSGGHLISNLTAAHNMS-AVGSFPIDAKMLQFSTDQIQCMCEALQQKGDVEK 201

Query: 240 LGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLK 299
           L  FL +LP  E    NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW K
Sbjct: 202 LTNFLCNLPPSEFFKTNESVLRARAMVAYNLGQFHELYSLLETHCFSIKYHVDLQNLWFK 261

Query: 300 AHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYP 359
           AHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP
Sbjct: 262 AHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYP 321

Query: 360 SPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           +P EK+ LA+ TGLT TQVSNWFKNRRQRDR  +Q+
Sbjct: 322 TPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQR 357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 338 TQVSNWF 344


>gi|195480260|ref|XP_002086645.1| GE22732 [Drosophila yakuba]
 gi|195495790|ref|XP_002095417.1| GE22381 [Drosophila yakuba]
 gi|194181518|gb|EDW95129.1| GE22381 [Drosophila yakuba]
 gi|194186435|gb|EDX00047.1| GE22732 [Drosophila yakuba]
          Length = 392

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 277 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 336

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 337 LTQVSNWFKNRRQRDRTPQQR 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 338 TQVSNWF 344


>gi|212288005|gb|ABI34233.3| RT01127p [Drosophila melanogaster]
          Length = 397

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 163 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 221

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 222 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 281

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 282 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 341

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 342 LTQVSNWFKNRRQRDRTPQQR 362



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 283 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 342

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 343 TQVSNWF 349


>gi|194875144|ref|XP_001973537.1| GG13283 [Drosophila erecta]
 gi|190655320|gb|EDV52563.1| GG13283 [Drosophila erecta]
          Length = 392

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 277 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 336

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 337 LTQVSNWFKNRRQRDRTPQQR 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 338 TQVSNWF 344


>gi|194749785|ref|XP_001957317.1| GF24111 [Drosophila ananassae]
 gi|190624599|gb|EDV40123.1| GF24111 [Drosophila ananassae]
          Length = 392

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 148/201 (73%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S +  S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVGSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 277 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 336

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 337 LTQVSNWFKNRRQRDRTPQQR 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 338 TQVSNWFKN 346


>gi|432892189|ref|XP_004075697.1| PREDICTED: homeobox protein SIX1-like [Oryzias latipes]
          Length = 230

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 125/182 (68%), Positives = 140/182 (76%), Gaps = 3/182 (1%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFKDLY 277
           FT EQV CVCEVL Q+G I+RL  FL ++P +   L + E VLKAKA VAFH G F DLY
Sbjct: 49  FTPEQVICVCEVLLQAGCIDRLAGFLRTIPPSSSGLEELEGVLKAKAAVAFHHGRFSDLY 108

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            +LES  FS  +H  LQ LWL+A Y EAE+ RGRPLGAVGKYRVRRKFPLP TIWDGEET
Sbjct: 109 ALLESFPFSSSSHWFLQQLWLRARYTEAERQRGRPLGAVGKYRVRRKFPLPHTIWDGEET 168

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
            YCFKEKSR +L++WY   PYPS REKRELA ATGLT TQVSNWFKNRRQR+RA   + G
Sbjct: 169 IYCFKEKSRRILKEWYRRGPYPSTREKRELAAATGLTATQVSNWFKNRRQRERAT--RVG 226

Query: 398 SV 399
           SV
Sbjct: 227 SV 228



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLP TIWDGEET YCFKEKSR +L++WY   PYPS REKRELA ATGLT 
Sbjct: 147 VGKYRVRRKFPLPHTIWDGEETIYCFKEKSRRILKEWYRRGPYPSTREKRELAAATGLTA 206

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 207 TQVSNWF 213


>gi|195591956|ref|XP_002085702.1| GD12161 [Drosophila simulans]
 gi|194197711|gb|EDX11287.1| GD12161 [Drosophila simulans]
          Length = 392

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 277 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 336

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 337 LTQVSNWFKNRRQRDRTPQQR 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 338 TQVSNWF 344


>gi|195440522|ref|XP_002068091.1| GK12359 [Drosophila willistoni]
 gi|194164176|gb|EDW79077.1| GK12359 [Drosophila willistoni]
          Length = 414

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/227 (54%), Positives = 157/227 (69%), Gaps = 13/227 (5%)

Query: 182 GLTTTQVSNWFSSANITSSPNTS-------TSTASISPI--LP----SFGFTQEQVACVC 228
           GL    V     +AN++ S N+S       T+  ++S +   P       F+ +Q+ C+C
Sbjct: 152 GLQRVGVVGVAGTANLSHSSNSSGHLISNLTTAHNMSAVGNFPIDAKMLQFSTDQIQCMC 211

Query: 229 EVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPH 288
           E LQQ G+IE+L  FL SLP  E    NESVL+A+AMVA++ G F +LY +LE+H FS  
Sbjct: 212 EALQQKGDIEKLTTFLCSLPPSEFFRTNESVLRARAMVAYNLGQFHELYNLLETHCFSIK 271

Query: 289 NHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSV 348
            H  LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ 
Sbjct: 272 YHVDLQNLWFKAHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNA 331

Query: 349 LRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           L+D Y  N YP+P EK+ LA+ TGLT TQVSNWFKNRRQRDR  +Q+
Sbjct: 332 LKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQR 378



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 299 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 358

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 359 TQVSNWF 365


>gi|21356333|ref|NP_649256.1| Six4, isoform A [Drosophila melanogaster]
 gi|24667695|ref|NP_730566.1| Six4, isoform B [Drosophila melanogaster]
 gi|5106878|gb|AAD39864.1|AF099185_1 homeobox protein SIX4 [Drosophila melanogaster]
 gi|7547018|gb|AAF63760.1|AF247709_1 myotonix [Drosophila melanogaster]
 gi|23094186|gb|AAF51640.3| Six4, isoform A [Drosophila melanogaster]
 gi|23094187|gb|AAN12144.1| Six4, isoform B [Drosophila melanogaster]
 gi|115646558|gb|ABI34201.2| RT01027p [Drosophila melanogaster]
 gi|162951733|gb|ABY21728.1| GM13131p [Drosophila melanogaster]
          Length = 392

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 277 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 336

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 337 LTQVSNWFKNRRQRDRTPQQR 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 337

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 338 TQVSNWF 344


>gi|432892191|ref|XP_004075698.1| PREDICTED: uncharacterized protein LOC101162386 [Oryzias latipes]
          Length = 928

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 112/176 (63%), Positives = 140/176 (79%), Gaps = 1/176 (0%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFK 274
           +  F+ +QV+C+CE L Q+GN++RL RFL ++P + E L  NE++LKA+A+VAFHR  FK
Sbjct: 45  ALSFSTDQVSCLCEALLQAGNVDRLWRFLSTIPPSSELLRGNETLLKAQALVAFHREEFK 104

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F P NH  LQ L+LKA Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 105 ELYAILESHDFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDG 164

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 165 EETVYCFKEKSRNALKECYKSNRYPTPDEKKNLAKVTGLSLTQVSNWFKNRRQRDR 220



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ 
Sbjct: 146 VDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKSNRYPTPDEKKNLAKVTGLSL 205

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 206 TQVSNWF 212


>gi|348534781|ref|XP_003454880.1| PREDICTED: homeobox protein SIX5-like [Oreochromis niloticus]
          Length = 928

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/176 (63%), Positives = 140/176 (79%), Gaps = 1/176 (0%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFK 274
           +  F+ +QV+C+CE L Q+GN++RL RFL ++P + E L  NE++LKA+A+VAFHR  FK
Sbjct: 45  ALSFSTDQVSCLCEALLQAGNVDRLWRFLSTIPPSSELLRGNETLLKAQALVAFHREEFK 104

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILESH F P NH  LQ L+LKA Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 105 ELYAILESHNFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDG 164

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 165 EETVYCFKEKSRNALKECYKSNRYPTPDEKKNLAKVTGLSLTQVSNWFKNRRQRDR 220



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 55/65 (84%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+KFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ TQ
Sbjct: 148 KYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKSNRYPTPDEKKNLAKVTGLSLTQ 207

Query: 188 VSNWF 192
           VSNWF
Sbjct: 208 VSNWF 212


>gi|164698402|ref|NP_001106938.1| optix [Tribolium castaneum]
 gi|162417305|emb|CAP58434.1| Optix [Tribolium castaneum]
 gi|270002745|gb|EEZ99192.1| sine oculis-related homeobox 3 [Tribolium castaneum]
          Length = 458

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 142/176 (80%), Gaps = 4/176 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFH 269
           LP+  FT  QVA VCE L++SG+IERL RFLWSLP       +L+KNE+VL+A+A+V FH
Sbjct: 46  LPTLNFTVAQVAAVCETLEESGDIERLARFLWSLPVAHPNIGELNKNEAVLRARAIVCFH 105

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILES++FS  +H KLQ +W  AHY EAEKLRGR LG V KYRVR+KFP PR
Sbjct: 106 SGNFRELYSILESNKFSKSSHHKLQEIWQLAHYQEAEKLRGRALGPVDKYRVRKKFPWPR 165

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNR
Sbjct: 166 TIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNR 221



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 7/91 (7%)

Query: 107 KEVWKSPVKTYQSSS-----IIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRD 161
           +E+W+  +  YQ +       +  + KYRVR+KFP PRTIWDGE+ ++CFKE++RS+LR+
Sbjct: 130 QEIWQ--LAHYQEAEKLRGRALGPVDKYRVRKKFPWPRTIWDGEQKTHCFKERTRSLLRE 187

Query: 162 WYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           WY  +PYP+P +KRELA+ATGLT TQV NWF
Sbjct: 188 WYLQDPYPNPTKKRELAQATGLTPTQVGNWF 218


>gi|340708883|ref|XP_003393047.1| PREDICTED: hypothetical protein LOC100645933 [Bombus terrestris]
 gi|350419086|ref|XP_003492066.1| PREDICTED: hypothetical protein LOC100742225 [Bombus impatiens]
          Length = 434

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 113/200 (56%), Positives = 148/200 (74%), Gaps = 3/200 (1%)

Query: 199 SSPNTSTSTASISPI---LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK 255
           SS NTST+  +I  +   + +  +T +Q++C+C+ L Q  +IE+L R LWSLP  E L +
Sbjct: 68  SSANTSTNIGNIGGLSLGITASNYTPDQISCMCKALSQRQDIEKLTRLLWSLPPGELLRR 127

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           +E+VL A+A VAFHRG + +LY ILESH FSP  HP+LQ +W K+HY EAEK+RGRPLGA
Sbjct: 128 DENVLIARATVAFHRGAYHELYSILESHPFSPDRHPELQQMWFKSHYSEAEKIRGRPLGA 187

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           V KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 188 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 247

Query: 376 TQVSNWFKNRRQRDRAAEQK 395
           TQV+NWFKNRRQRDR  + +
Sbjct: 248 TQVANWFKNRRQRDRTPQTR 267



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 51/67 (76%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 188 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 247

Query: 186 TQVSNWF 192
           TQV+NWF
Sbjct: 248 TQVANWF 254


>gi|308220156|gb|ADO22650.1| SIX class homeobox transcription factor SIX28 [Mnemiopsis leidyi]
          Length = 275

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 121/200 (60%), Positives = 150/200 (75%), Gaps = 3/200 (1%)

Query: 199 SSPNTSTSTASISPILPSFG-FTQEQVACVCEVLQQSGNIERLGRFLWSLP--ACEKLHK 255
           S P    S  +  P   SF  FT EQVA VCE L+ SG+I+RL RFLWSLP    E+ +K
Sbjct: 10  SPPGMECSVITSYPDETSFPHFTVEQVASVCESLESSGDIDRLSRFLWSLPLTQIEEFNK 69

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           NE +++++A+V FHR  +++LY I+E+  FS  +H KLQ LW +AHY EAEKLRGR LGA
Sbjct: 70  NERIMRSRAVVCFHRQEYRELYSIIENCGFSRDSHEKLQYLWNEAHYNEAEKLRGRALGA 129

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           V KYRVR+KFPLP+TIWDG+  ++CFKEKSR++L++WY+ NPYPSP  KRELA   GLT 
Sbjct: 130 VDKYRVRKKFPLPQTIWDGKIQNHCFKEKSRAILKEWYSKNPYPSPHTKRELANTAGLTA 189

Query: 376 TQVSNWFKNRRQRDRAAEQK 395
           TQVSNWFKNRRQRDRAA  K
Sbjct: 190 TQVSNWFKNRRQRDRAALTK 209



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 13/96 (13%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP+TIWDG+  ++CFKEKSR++L++WY+ NPYPSP  KRELA   GLT 
Sbjct: 130 VDKYRVRKKFPLPQTIWDGKIQNHCFKEKSRAILKEWYSKNPYPSPHTKRELANTAGLTA 189

Query: 186 TQVSNWF-------------SSANITSSPNTSTSTA 208
           TQVSNWF             S+  +  SP+ ST+T+
Sbjct: 190 TQVSNWFKNRRQRDRAALTKSNKTLIMSPDRSTTTS 225


>gi|18859369|ref|NP_571795.1| homeobox protein SIX5 [Danio rerio]
 gi|11344513|dbj|BAB18512.1| homeobox protein six4.3 [Danio rerio]
          Length = 797

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 140/176 (79%), Gaps = 1/176 (0%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFK 274
           +  F+ +QVAC+CE L Q+GN++RL RFL ++P + + L  NE++LKA+A+VAFHR  FK
Sbjct: 47  ALSFSTDQVACLCEALLQAGNVDRLWRFLATIPPSADLLRGNETLLKAQALVAFHRDEFK 106

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY IL+SH F P NH  LQ L+LKA Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 107 ELYAILDSHDFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDG 166

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 167 EETVYCFKEKSRNALKECYKINRYPTPAEKKNLAKVTGLSLTQVSNWFKNRRQRDR 222



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 55/65 (84%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+KFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EK+ LA+ TGL+ TQ
Sbjct: 150 KYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKINRYPTPAEKKNLAKVTGLSLTQ 209

Query: 188 VSNWF 192
           VSNWF
Sbjct: 210 VSNWF 214


>gi|125977962|ref|XP_001353014.1| GA17741 [Drosophila pseudoobscura pseudoobscura]
 gi|54641765|gb|EAL30515.1| GA17741 [Drosophila pseudoobscura pseudoobscura]
          Length = 395

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 147/201 (73%), Gaps = 1/201 (0%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T+  N S +  +         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 161 SNLTAGHNMS-AVGNFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 219

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW KAHY EAEK+RGRPLG
Sbjct: 220 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 279

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 280 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 339

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 340 LTQVSNWFKNRRQRDRTPQQR 360



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 3/97 (3%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 281 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 340

Query: 186 TQVSNWFSSANITS-SPNTSTSTASISPI--LPSFGF 219
           TQVSNWF +      +P   +   S+ P+  L   GF
Sbjct: 341 TQVSNWFKNRRQRDRTPQQRSDIMSVLPVGQLDGNGF 377


>gi|397504344|ref|XP_003822758.1| PREDICTED: homeobox protein SIX3 [Pan paniscus]
          Length = 252

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 110/160 (68%), Positives = 140/160 (87%), Gaps = 4/160 (2%)

Query: 229 EVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQ 284
           E L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+
Sbjct: 43  ETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHK 102

Query: 285 FSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEK 344
           F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE+
Sbjct: 103 FTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKER 162

Query: 345 SRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           +RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 163 TRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 202



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 134 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 193

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 194 TQVGNWFKN 202


>gi|11991853|gb|AAG42360.1|AF276994_1 homeobox protein Six4.1, partial [Xenopus laevis]
          Length = 163

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 132/163 (80%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           EQVACVCE LQQ G+++RL RFL SLP  E L  NES+LKA+A+VAFH+G++ +L+ +LE
Sbjct: 1   EQVACVCEALQQGGDLDRLARFLCSLPHSELLRGNESILKARALVAFHQGSYSELFLLLE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           SH F P NH  LQ LW KA Y+EAEK RGRPLGAV KYR+RRKFPLPRTIWDGEET YCF
Sbjct: 61  SHNFHPSNHAALQELWYKARYIEAEKARGRPLGAVDKYRLRRKFPLPRTIWDGEETIYCF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           KEKSR+ L++ Y HN YPSP  KR LA+ TGL+ TQVSNWFKN
Sbjct: 121 KEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSLTQVSNWFKN 163



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y HN YPSP  KR LA+ TGL+ 
Sbjct: 95  VDKYRLRRKFPLPRTIWDGEETIYCFKEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSL 154

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 155 TQVSNWFKN 163


>gi|440910226|gb|ELR60043.1| Homeobox protein SIX4, partial [Bos grunniens mutus]
          Length = 696

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 109/168 (64%), Positives = 128/168 (76%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 18  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 77

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 78  YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 137

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           T YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQ S+   N
Sbjct: 138 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQASDQMGN 185



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 117 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 176

Query: 186 TQVSNWF 192
           TQ S+  
Sbjct: 177 TQASDQM 183


>gi|348020119|gb|AEP44001.1| sine oculis-like transcription factor Six4/5B [Craspedacusta
           sowerbyi]
          Length = 275

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 113/192 (58%), Positives = 143/192 (74%), Gaps = 3/192 (1%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
            G+T +QV C+C+ L QS + E L +FLWS+P  +    +ESV+KAKA VAF +  +++L
Sbjct: 21  LGYTADQVDCICDALVQSQDHETLAKFLWSIPRSDLFLSSESVVKAKAHVAFQQCRYREL 80

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           Y +LE+H+F P  HP LQ +W +AHY EAEK+RGRPLGAV KYR+RRKFPLPRTIWDGEE
Sbjct: 81  YSLLETHEFDPDCHPILQQMWHEAHYAEAEKVRGRPLGAVEKYRIRRKFPLPRTIWDGEE 140

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR---AAE 393
           T YCFKEKSR +LR+WY  N YP+P++KR LA+ T LT  QVSNWFKNRRQRD+    AE
Sbjct: 141 TVYCFKEKSRQILREWYDKNKYPTPQDKRLLAKRTELTLVQVSNWFKNRRQRDKPQGEAE 200

Query: 394 QKDGSVHSFRVN 405
              G V S  ++
Sbjct: 201 DNKGHVRSMSMD 212



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR +LR+WY  N YP+P++KR LA+ T LT 
Sbjct: 120 VEKYRIRRKFPLPRTIWDGEETVYCFKEKSRQILREWYDKNKYPTPQDKRLLAKRTELTL 179

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 180 VQVSNWF 186


>gi|256087174|ref|XP_002579750.1| homeobox protein six-related [Schistosoma mansoni]
          Length = 1436

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 113/184 (61%), Positives = 139/184 (75%), Gaps = 2/184 (1%)

Query: 207 TASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE-KLHKNESVLKAKAM 265
           T + +P   +F F + Q+ C+CE LQQ G+I+RL  F+ +LP    +LH  E +  AKAM
Sbjct: 81  TTTTTPNDSNF-FNEIQIICICETLQQRGDIDRLELFIQTLPKWNIQLHNLECIQVAKAM 139

Query: 266 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 325
           +AFH   +  LY ILE+  FS   H +LQ LWL+AHY E EK++GR LGAV KYR+RRK+
Sbjct: 140 IAFHHEQYTQLYHILENCNFSSIYHSRLQNLWLRAHYAEEEKIKGRILGAVAKYRIRRKY 199

Query: 326 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           PLP TIWDGEETSYCFKEKSR++LR+WY  NPYPSPR+KR+LAE TGLT TQVSNWFKNR
Sbjct: 200 PLPHTIWDGEETSYCFKEKSRNLLREWYHQNPYPSPRDKRQLAEITGLTITQVSNWFKNR 259

Query: 386 RQRD 389
           RQRD
Sbjct: 260 RQRD 263



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 63/71 (88%)

Query: 122 IIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 181
           I+  + KYR+RRK+PLP TIWDGEETSYCFKEKSR++LR+WY  NPYPSPR+KR+LAE T
Sbjct: 186 ILGAVAKYRIRRKYPLPHTIWDGEETSYCFKEKSRNLLREWYHQNPYPSPRDKRQLAEIT 245

Query: 182 GLTTTQVSNWF 192
           GLT TQVSNWF
Sbjct: 246 GLTITQVSNWF 256


>gi|410909988|ref|XP_003968472.1| PREDICTED: homeobox protein SIX5-like [Takifugu rubripes]
          Length = 903

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 139/176 (78%), Gaps = 1/176 (0%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFK 274
           +  F+ +Q++C+CE L Q+GN+ERL RFL ++P + E L  NE++LKA+A+VAFHR  FK
Sbjct: 45  ALTFSTDQISCLCEALLQAGNVERLWRFLSTIPLSSELLRGNETLLKAQALVAFHREEFK 104

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           DLY ILES+ F P NH  LQ L+LKA Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 105 DLYAILESYAFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDG 164

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YP+P EK+ L + TGL+ TQVSNWFKNRRQRDR
Sbjct: 165 EETVYCFKEKSRNALKECYKRNRYPTPDEKKNLTKVTGLSLTQVSNWFKNRRQRDR 220



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 54/65 (83%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+KFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EK+ L + TGL+ TQ
Sbjct: 148 KYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKRNRYPTPDEKKNLTKVTGLSLTQ 207

Query: 188 VSNWF 192
           VSNWF
Sbjct: 208 VSNWF 212


>gi|11991855|gb|AAG42361.1|AF276995_1 homeobox protein Six4.2, partial [Xenopus laevis]
          Length = 165

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 132/165 (80%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           +QVACVCE LQQ G+++RL RFL SLP  E L  NES+L+A+A+VAFH+G F +L+ +LE
Sbjct: 1   DQVACVCEALQQGGDLDRLARFLCSLPHSELLRGNESILRARALVAFHQGMFSELFLLLE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           SH F P +H  LQ LW KA Y+EAEK RGR LGAV KYR+RRKFPLPRTIWDGEET YCF
Sbjct: 61  SHNFQPSHHAALQELWYKARYIEAEKARGRALGAVDKYRLRRKFPLPRTIWDGEETVYCF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           KEKSR+ L++ Y HN YPSP  KR LA+ TGL+ TQVSNWFKNRR
Sbjct: 121 KEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSLTQVSNWFKNRR 165



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y HN YPSP  KR LA+ TGL+ 
Sbjct: 95  VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKHNRYPSPAAKRNLAKVTGLSL 154

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 155 TQVSNWFKN 163


>gi|425906033|gb|AFY10813.1| Six1/2, partial [Isodiametra pulchra]
          Length = 181

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 108/178 (60%), Positives = 145/178 (81%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           L SF F+ +Q AC+C +++ S  I++L +FLW+LP  E   ++E+VL+++A +AF+   +
Sbjct: 4   LGSFPFSADQAACLCHLMEVSSEIKKLEKFLWTLPNYENYQQHENVLRSRAFLAFNEQQY 63

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K++YRI++S  +S +N   LQ LWL +HY E+E  R +PLG+VGK+R+RRKFPLPRTIWD
Sbjct: 64  KEVYRIIQSKPYSMNNLFALQQLWLNSHYAESENSRKKPLGSVGKHRIRRKFPLPRTIWD 123

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           GEETSYCFKEK+R++LRD+Y HNPYPSPREKR+LAEAT L+ TQVSNWFKNRRQRDRA
Sbjct: 124 GEETSYCFKEKTRNMLRDYYGHNPYPSPREKRDLAEATDLSITQVSNWFKNRRQRDRA 181



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 63/67 (94%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + K+R+RRKFPLPRTIWDGEETSYCFKEK+R++LRD+Y HNPYPSPREKR+LAEAT L+ 
Sbjct: 106 VGKHRIRRKFPLPRTIWDGEETSYCFKEKTRNMLRDYYGHNPYPSPREKRDLAEATDLSI 165

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 166 TQVSNWF 172


>gi|91079702|ref|XP_968740.1| PREDICTED: similar to AGAP011067-PA, partial [Tribolium castaneum]
          Length = 223

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/167 (67%), Positives = 134/167 (80%)

Query: 224 VACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESH 283
           V C+CE L Q G+IERL  FLWSLP  E L  NES+L+A+A VAF+RG++ +LY ILESH
Sbjct: 1   VQCMCEALHQRGDIERLATFLWSLPPSELLRGNESILRARAAVAFYRGSYHELYSILESH 60

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
            F+   H +LQ LW KAHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKE
Sbjct: 61  AFNQRWHAELQTLWFKAHYNEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKE 120

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           +SR+ L++ Y  N YP+P EKR LA+ TGLT TQVSNWFKNRRQRDR
Sbjct: 121 RSRNALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR 167



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EKR LA+ TGLT 
Sbjct: 93  VDKYRLRKKYPLPKTIWDGEETVYCFKERSRNALKECYARNRYPTPDEKRALAKRTGLTL 152

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 153 TQVSNWF 159


>gi|157278262|ref|NP_001098230.1| homeobox protein SIX3 [Oryzias latipes]
 gi|6094294|sp|O73916.1|SIX3_ORYLA RecName: Full=Homeobox protein SIX3; AltName: Full=Sine oculis
           homeobox homolog 3
 gi|3115307|emb|CAA04394.1| Six3 [Oryzias latipes]
          Length = 272

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 110/179 (61%), Positives = 144/179 (80%), Gaps = 4/179 (2%)

Query: 210 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAM 265
           +S  LP   F+  Q+A VCE L+++G+IERL RFLWSLP      + + ++ESV +A+A+
Sbjct: 41  LSLALPGLCFSATQIASVCETLEETGDIERLARFLWSLPVNTDGRDSISEHESVQRARAV 100

Query: 266 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 325
           VAFH G +++LYRILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KF
Sbjct: 101 VAFHTGCYRELYRILETHRFTRASHSKLQAMWLEAHYREAEKLRGRPLGPVDKYRVRKKF 160

Query: 326 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           PLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 161 PLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTPTQVGNWFKN 219



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 151 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTP 210

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 211 TQVGNWF 217


>gi|391336838|ref|XP_003742785.1| PREDICTED: uncharacterized protein LOC100903508 [Metaseiulus
           occidentalis]
          Length = 431

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/193 (59%), Positives = 142/193 (73%)

Query: 198 TSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE 257
           T+  N  TS  +   +     F+ EQVACVCEVLQQSG+  RL  FLWSLP  E+    E
Sbjct: 102 TTRNNHPTSCPTPPSVRKKMSFSLEQVACVCEVLQQSGDTNRLESFLWSLPKTEEFQYCE 161

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           +VL+AKA+VAF + ++K++Y ILESH F P +H +LQ +W  AHY EA K RGR LGAV 
Sbjct: 162 AVLRAKAIVAFKKESYKEMYSILESHAFGPTHHDELQFMWFTAHYNEAAKSRGRKLGAVD 221

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+RRKFPLP+TIWDGE+T YCFKE+SR  L++ Y  N YPSP +KR L+E TGL+ TQ
Sbjct: 222 KYRIRRKFPLPKTIWDGEDTIYCFKERSRQALKESYKLNAYPSPDDKRTLSEKTGLSLTQ 281

Query: 378 VSNWFKNRRQRDR 390
           +SNWFKNRRQRDR
Sbjct: 282 ISNWFKNRRQRDR 294



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 55/67 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLP+TIWDGE+T YCFKE+SR  L++ Y  N YPSP +KR L+E TGL+ 
Sbjct: 220 VDKYRIRRKFPLPKTIWDGEDTIYCFKERSRQALKESYKLNAYPSPDDKRTLSEKTGLSL 279

Query: 186 TQVSNWF 192
           TQ+SNWF
Sbjct: 280 TQISNWF 286


>gi|196166485|gb|ACG70801.1| Six3/6 [Convolutriloba longifissura]
          Length = 588

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 137/171 (80%), Gaps = 2/171 (1%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA--CEKLHKNESVLKAKAMVAFHRGNFK 274
            GF  EQVA VC+ L++SG+ +RL RFLWSLP    E   KNES+LKA+A V FH G F+
Sbjct: 79  MGFNPEQVAQVCDTLEESGDFDRLSRFLWSLPPHLLESTMKNESILKAQATVYFHNGQFR 138

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           DLY +LE+++F    HPKLQA+WL+AHY EAE+LRGRPLG V KYRVR+K+PLPRTIWDG
Sbjct: 139 DLYVLLENNRFKKDYHPKLQAMWLEAHYQEAERLRGRPLGPVDKYRVRKKYPLPRTIWDG 198

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           E+ ++CFKE++R +LR++Y  +PYP+P +K+ELA+ TGLT TQV NWFKNR
Sbjct: 199 EQKTHCFKERTRGLLREYYLTDPYPNPNKKKELAQLTGLTPTQVGNWFKNR 249



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+PLPRTIWDGE+ ++CFKE++R +LR++Y  +PYP+P +K+ELA+ TGLT 
Sbjct: 180 VDKYRVRKKYPLPRTIWDGEQKTHCFKERTRGLLREYYLTDPYPNPNKKKELAQLTGLTP 239

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 240 TQVGNWF 246


>gi|268566867|ref|XP_002647657.1| C. briggsae CBR-CEH-33 protein [Caenorhabditis briggsae]
          Length = 264

 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 113/181 (62%), Positives = 141/181 (77%), Gaps = 5/181 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           +++EQVAC+CE L  + +  +L +F+W+    +++  N+ +LKA+A +A+H  NFK+LYR
Sbjct: 20  YSEEQVACICEAL--TNDAGKLSQFVWTTLERDEMRNNQYILKAQAFLAYHSNNFKELYR 77

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           I+E+H F+  +H  LQ  WL AHY EAEK+RGR LGAVGKYR+RRK+PLPRTIWDGEETS
Sbjct: 78  IIETHHFASEHHLSLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 137

Query: 339 YCFK-EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA--EQK 395
           YCF+  KSR +LRDWY  N YPSPREKRELAE T LT TQVSNWFKNRRQRDRA   E K
Sbjct: 138 YCFRARKSRVLLRDWYVRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRAGIPEGK 197

Query: 396 D 396
           D
Sbjct: 198 D 198



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFK-EKSRSVLRDWYTHNPYPSPREKRELAEATGLT 184
           + KYR+RRK+PLPRTIWDGEETSYCF+  KSR +LRDWY  N YPSPREKRELAE T LT
Sbjct: 115 VGKYRIRRKYPLPRTIWDGEETSYCFRARKSRVLLRDWYVRNSYPSPREKRELAEKTHLT 174

Query: 185 TTQVSNWF 192
            TQVSNWF
Sbjct: 175 VTQVSNWF 182


>gi|317419552|emb|CBN81589.1| Homeobox protein SIX3 [Dicentrarchus labrax]
          Length = 277

 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/175 (61%), Positives = 142/175 (81%), Gaps = 4/175 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
           LP   F+  Q+A VCE L+++G+IERL RFLWSLP      + + ++ESV +A+A+VA+H
Sbjct: 45  LPGLCFSAAQIASVCETLEETGDIERLARFLWSLPVTTDGRDSISEHESVQRARAVVAYH 104

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G+F++LY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 105 TGSFRELYHILETHRFTRASHGKLQAMWLEAHYREAEKLRGRPLGPVDKYRVRKKFPLPR 164

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 165 TIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTPTQVGNWFKN 219



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 151 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTP 210

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 211 TQVGNWF 217


>gi|410931910|ref|XP_003979338.1| PREDICTED: homeobox protein SIX3-like [Takifugu rubripes]
          Length = 272

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 111/198 (56%), Positives = 148/198 (74%), Gaps = 6/198 (3%)

Query: 194 SANITSSPNTSTSTASISP--ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC- 250
            A +     +     S+ P   LP   F+  Q+A VCE L+++G++ERL RFLWSLP   
Sbjct: 23  GAPVGGRSQSPEDLKSVGPPLALPGLCFSATQIASVCETLEETGDVERLARFLWSLPVTG 82

Query: 251 ---EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEK 307
              + + + ESV +A+A+VAFH G+F++LY ILE+H+F+  +H KLQA+WL+AHY EAEK
Sbjct: 83  DGRDSISEQESVQRARAVVAFHTGSFRELYHILETHRFTRASHGKLQAMWLEAHYREAEK 142

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKREL 367
           LRGRPLG V KYRVR+KFPLP+TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KREL
Sbjct: 143 LRGRPLGPVDKYRVRKKFPLPKTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKREL 202

Query: 368 AEATGLTTTQVSNWFKNR 385
           A ATGLT TQV NWFKNR
Sbjct: 203 AHATGLTPTQVGNWFKNR 220



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP+TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 151 VDKYRVRKKFPLPKTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTP 210

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 211 TQVGNWF 217


>gi|440899601|gb|ELR50882.1| Homeobox protein SIX3, partial [Bos grunniens mutus]
          Length = 229

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/153 (69%), Positives = 134/153 (87%), Gaps = 4/153 (2%)

Query: 236 NIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHP 291
           +IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H 
Sbjct: 1   DIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHG 60

Query: 292 KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRD 351
           KLQA+WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+
Sbjct: 61  KLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLRE 120

Query: 352 WYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 121 WYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 153



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 85  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 144

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 145 TQVGNWF 151


>gi|221121056|ref|XP_002156969.1| PREDICTED: homeobox protein SIX4 [Hydra magnipapillata]
 gi|144369375|dbj|BAF56231.1| Six-B [Hydra vulgaris]
          Length = 226

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/189 (57%), Positives = 142/189 (75%), Gaps = 4/189 (2%)

Query: 218 GFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLY 277
            +T +Q+ CVCE L QS +   L +FLWS+P  + +  +E V+KAKA VA ++  +++LY
Sbjct: 21  SYTYDQIDCVCEALIQSQDFNTLAKFLWSIPRNDIVRNSEHVVKAKAHVAMYQERYRELY 80

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            ILE+H+F   NHP LQ +W  AHY++AEK+RGRPLGAV KYR+RRK+PLPRTIWDGEET
Sbjct: 81  NILENHKFKSENHPILQQMWHDAHYLDAEKMRGRPLGAVEKYRIRRKYPLPRTIWDGEET 140

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR----AAE 393
            YCFKEKSR VLRDWY +N YP+P++KR LA+ T LT  QVSNWFKNRRQRD+    + +
Sbjct: 141 VYCFKEKSRQVLRDWYENNKYPTPQDKRILAKRTELTLVQVSNWFKNRRQRDKPQSDSGD 200

Query: 394 QKDGSVHSF 402
           +K  S+ S 
Sbjct: 201 EKPSSIRSI 209



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 62/86 (72%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+RRK+PLPRTIWDGEET YCFKEKSR VLRDWY +N YP+P++KR LA+ T LT  Q
Sbjct: 121 KYRIRRKYPLPRTIWDGEETVYCFKEKSRQVLRDWYENNKYPTPQDKRILAKRTELTLVQ 180

Query: 188 VSNWFSSANITSSPNTSTSTASISPI 213
           VSNWF +      P + +     S I
Sbjct: 181 VSNWFKNRRQRDKPQSDSGDEKPSSI 206


>gi|229487376|emb|CAY54143.1| unnamed protein product [Heliconius melpomene]
 gi|345647503|gb|AEO13432.1| optix [Heliconius erato emma]
 gi|345647505|gb|AEO13433.1| optix [Heliconius erato favorinus]
 gi|345647507|gb|AEO13434.1| optix [Heliconius erato petiverana]
 gi|345647509|gb|AEO13435.1| optix [Heliconius melpomene rosina]
 gi|345647511|gb|AEO13436.1| optix [Heliconius cydno galanthus]
 gi|345647513|gb|AEO13437.1| optix [Heliconius pachinus]
 gi|443429449|gb|AGC92733.1| six sine homebox transcription factor [Heliconius erato]
          Length = 267

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 137/170 (80%), Gaps = 4/170 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFHRGNFK 274
           F+  QVA VCE L++SG++ERL RFLWSLP       +L + E+VL+A+A+VAFH G  +
Sbjct: 57  FSAAQVATVCETLEESGDVERLARFLWSLPVAHPNVAELERCEAVLRARAVVAFHAGRHR 116

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILE H+F   +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDG
Sbjct: 117 ELYSILERHRFQRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDG 176

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           E+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 177 EQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 226



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 158 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 217

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 218 TQVGNWF 224


>gi|71068440|gb|AAZ23142.1| Six3/6a [Oikopleura dioica]
 gi|71068442|gb|AAZ23143.1| Six3/6a [Oikopleura dioica]
          Length = 299

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/184 (59%), Positives = 146/184 (79%), Gaps = 4/184 (2%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGN 272
           F F+   VA +C VL+++G+ +RL RFLWSLPA     + L  +E++L+A+A+VA+H+GN
Sbjct: 24  FPFSPASVAQLCTVLEETGDFDRLARFLWSLPALPPILDALANDETLLRARAVVAYHQGN 83

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F+++YRI+ES +FS  +H KLQ LWL+AHY EAE  RGR LG V KYR+R+K+PLPRTIW
Sbjct: 84  FREMYRIVESKRFSKVHHTKLQELWLEAHYGEAEATRGRSLGPVDKYRIRKKYPLPRTIW 143

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT TQV NWFKNRRQRDRAA
Sbjct: 144 DGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTPTQVGNWFKNRRQRDRAA 203

Query: 393 EQKD 396
             K+
Sbjct: 204 ATKN 207



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLPRTIWDGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT 
Sbjct: 127 VDKYRIRKKYPLPRTIWDGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTP 186

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 187 TQVGNWF 193


>gi|357624570|gb|EHJ75294.1| hypothetical protein KGM_08309 [Danaus plexippus]
          Length = 269

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 137/170 (80%), Gaps = 4/170 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFHRGNFK 274
           F+  QVA VCE L++SG++ERL RFLWSLP       +L + E+VL+A+A+VAFH G  +
Sbjct: 59  FSAAQVATVCETLEESGDVERLARFLWSLPVAHPNVAELERCEAVLRARAVVAFHAGRHR 118

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILE H+F   +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDG
Sbjct: 119 ELYSILERHRFQRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDG 178

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           E+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 179 EQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 228



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 160 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 219

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 220 TQVGNWF 226


>gi|229487368|emb|CAY54142.1| unnamed protein product [Heliconius melpomene]
          Length = 251

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 137/170 (80%), Gaps = 4/170 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACE----KLHKNESVLKAKAMVAFHRGNFK 274
           F+  QVA VCE L++SG++ERL RFLWSLP       +L + E+VL+A+A+VAFH G  +
Sbjct: 57  FSAAQVATVCETLEESGDVERLARFLWSLPVAHPNVAELERCEAVLRARAVVAFHAGRHR 116

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILE H+F   +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDG
Sbjct: 117 ELYSILERHRFQRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDG 176

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           E+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 177 EQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 226



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 158 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 217

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 218 TQVGNWF 224


>gi|195172235|ref|XP_002026904.1| GL12751 [Drosophila persimilis]
 gi|194112672|gb|EDW34715.1| GL12751 [Drosophila persimilis]
          Length = 392

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/216 (54%), Positives = 150/216 (69%), Gaps = 1/216 (0%)

Query: 180 ATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIER 239
           A  L    V+     +N+T+  N S +  +         F+ +Q+ C+CE LQQ G+IE+
Sbjct: 143 AGSLGGNPVTGGHLISNLTAGHNMS-AVGNFPIDAKMLQFSTDQIQCMCEALQQKGDIEK 201

Query: 240 LGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLK 299
           L  FL SLP  E    NESVL+A+AMVA++ G F +LY +LE+H FS   H  LQ LW K
Sbjct: 202 LTTFLCSLPPSEFFKTNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFK 261

Query: 300 AHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYP 359
           AHY EAEK+RGRPLGAV KYR+R+K+PLP+TIWDGEET YCFKEK R+ L+D Y  N YP
Sbjct: 262 AHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKWRNALKDCYLTNRYP 321

Query: 360 SPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           +P EK+ L++ TGLT TQVSNWFKNRRQRDR  +Q+
Sbjct: 322 TPDEKKTLSKKTGLTLTQVSNWFKNRRQRDRTPQQR 357



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 3/97 (3%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEK R+ L+D Y  N YP+P EK+ L++ TGLT 
Sbjct: 278 VDKYRLRKKYPLPKTIWDGEETVYCFKEKWRNALKDCYLTNRYPTPDEKKTLSKKTGLTL 337

Query: 186 TQVSNWFSSANITS-SPNTSTSTASISPI--LPSFGF 219
           TQVSNWF +      +P   +   S+ P+  L   GF
Sbjct: 338 TQVSNWFKNRRQRDRTPQQRSDIMSVLPVGQLDGNGF 374


>gi|321476633|gb|EFX87593.1| hypothetical protein DAPPUDRAFT_27769 [Daphnia pulex]
          Length = 167

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 112/167 (67%), Positives = 133/167 (79%), Gaps = 2/167 (1%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACE--KLHKNESVLKAKAMVAFHRGNFKDLYRI 279
           +QVACVCE LQQ+G++ERL RFLWSLPA E      +ESVL+A+  VAFHRGN+++LY +
Sbjct: 1   DQVACVCEALQQAGDMERLSRFLWSLPASELSGSASSESVLRARVAVAFHRGNYRELYNL 60

Query: 280 LESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSY 339
           LESH FS   H +LQ +W  AHY EAEK+R R LGAV KYR+RRK+PLP+TIWDGEET Y
Sbjct: 61  LESHSFSSQYHQELQNIWYGAHYKEAEKVRNRALGAVDKYRLRRKYPLPKTIWDGEETIY 120

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           CFKEKSR+ L+D Y  N YP+P EKR LA+ TGLT TQVSNWFKNRR
Sbjct: 121 CFKEKSRAALKDCYRQNRYPTPDEKRTLAKKTGLTLTQVSNWFKNRR 167



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EKR LA+ TGLT 
Sbjct: 97  VDKYRLRRKYPLPKTIWDGEETIYCFKEKSRAALKDCYRQNRYPTPDEKRTLAKKTGLTL 156

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 157 TQVSNWF 163


>gi|328791573|ref|XP_001120698.2| PREDICTED: hypothetical protein LOC724796 [Apis mellifera]
          Length = 436

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/200 (55%), Positives = 145/200 (72%), Gaps = 3/200 (1%)

Query: 199 SSPNTSTSTASISPI---LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK 255
           SS NTST+  +I  +   + +  +T +Q++C+C+ L Q  +IE+L R LWSLP  E   +
Sbjct: 70  SSANTSTNIGNIGGLSLGITASNYTPDQISCMCKALSQRQDIEKLTRLLWSLPPGELFRR 129

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           +E+VL A+A VAFHRG + +LY ILESH FS   HP+LQ +W K+HY EAEK+RGRPLG 
Sbjct: 130 DENVLIARATVAFHRGAYHELYSILESHPFSSDRHPELQQMWYKSHYREAEKIRGRPLGP 189

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           V KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 190 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 249

Query: 376 TQVSNWFKNRRQRDRAAEQK 395
           TQV+NWFKNRRQRDR  + +
Sbjct: 250 TQVANWFKNRRQRDRTPQTR 269



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 51/67 (76%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 190 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 249

Query: 186 TQVSNWF 192
           TQV+NWF
Sbjct: 250 TQVANWF 256


>gi|380028445|ref|XP_003697912.1| PREDICTED: uncharacterized protein LOC100870522 [Apis florea]
          Length = 436

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/200 (55%), Positives = 145/200 (72%), Gaps = 3/200 (1%)

Query: 199 SSPNTSTSTASISPI---LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK 255
           SS NTST+  +I  +   + +  +T +Q++C+C+ L Q  +IE+L R LWSLP  E   +
Sbjct: 70  SSANTSTNIGNIGGLSLGITASNYTPDQISCMCKALSQRQDIEKLTRLLWSLPPGELFRR 129

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           +E+VL A+A VAFHRG + +LY ILESH FS   HP+LQ +W K+HY EAEK+RGRPLG 
Sbjct: 130 DENVLIARATVAFHRGAYHELYSILESHPFSSDRHPELQQMWYKSHYREAEKIRGRPLGP 189

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           V KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 190 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 249

Query: 376 TQVSNWFKNRRQRDRAAEQK 395
           TQV+NWFKNRRQRDR  + +
Sbjct: 250 TQVANWFKNRRQRDRTPQTR 269



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 51/67 (76%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEE  YCFKE+SR+ L+  Y    YP   EK+ LA+ TGLT 
Sbjct: 190 VDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKETGLTL 249

Query: 186 TQVSNWF 192
           TQV+NWF
Sbjct: 250 TQVANWF 256


>gi|195150607|ref|XP_002016242.1| GL11483 [Drosophila persimilis]
 gi|194110089|gb|EDW32132.1| GL11483 [Drosophila persimilis]
          Length = 493

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 122/207 (58%), Positives = 161/207 (77%), Gaps = 6/207 (2%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHSFRVNIGGDSK 411
           RRQRDRAA  K+   H+    +G  S+
Sbjct: 207 RRQRDRAAAAKNRLQHNQNSGMGCRSR 233



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|24586477|ref|NP_524695.2| optix, isoform A [Drosophila melanogaster]
 gi|27923824|sp|Q95RW8.1|OPTIX_DROME RecName: Full=Protein Optix; AltName: Full=Homeobox protein SIX3;
           Short=D-Six3
 gi|16768812|gb|AAL28625.1| LD05472p [Drosophila melanogaster]
 gi|21627756|gb|AAF59147.3| optix, isoform A [Drosophila melanogaster]
 gi|220943272|gb|ACL84179.1| Optix-PA [synthetic construct]
 gi|220953450|gb|ACL89268.1| Optix-PA [synthetic construct]
          Length = 487

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 157/197 (79%), Gaps = 6/197 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHS 401
           RRQRDRAA  K+   HS
Sbjct: 207 RRQRDRAAAAKNRIQHS 223



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|195332329|ref|XP_002032851.1| GM21001 [Drosophila sechellia]
 gi|194124821|gb|EDW46864.1| GM21001 [Drosophila sechellia]
          Length = 487

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 157/197 (79%), Gaps = 6/197 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHS 401
           RRQRDRAA  K+   HS
Sbjct: 207 RRQRDRAAAAKNRIQHS 223



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|125808175|ref|XP_001360662.1| GA14941 [Drosophila pseudoobscura pseudoobscura]
 gi|54635834|gb|EAL25237.1| GA14941 [Drosophila pseudoobscura pseudoobscura]
          Length = 492

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/203 (59%), Positives = 159/203 (78%), Gaps = 6/203 (2%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHSFRVNIG 407
           RRQRDRAA  K+   H+    +G
Sbjct: 207 RRQRDRAAAAKNRLQHNQNSGMG 229



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|195474578|ref|XP_002089568.1| GE19170 [Drosophila yakuba]
 gi|194175669|gb|EDW89280.1| GE19170 [Drosophila yakuba]
          Length = 492

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 157/197 (79%), Gaps = 6/197 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHS 401
           RRQRDRAA  K+   HS
Sbjct: 207 RRQRDRAAAAKNRIQHS 223



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|442622861|ref|NP_001260793.1| optix, isoform C [Drosophila melanogaster]
 gi|440214189|gb|AGB93326.1| optix, isoform C [Drosophila melanogaster]
          Length = 492

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 157/197 (79%), Gaps = 6/197 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHS 401
           RRQRDRAA  K+   HS
Sbjct: 207 RRQRDRAAAAKNRIQHS 223



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|194863616|ref|XP_001970528.1| GG23326 [Drosophila erecta]
 gi|190662395|gb|EDV59587.1| GG23326 [Drosophila erecta]
          Length = 490

 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 157/197 (79%), Gaps = 6/197 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 RRQRDRAAEQKDGSVHS 401
           RRQRDRAA  K+   HS
Sbjct: 207 RRQRDRAAAAKNRIQHS 223



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|5106950|gb|AAD39903.1|AF108818_1 homeobox protein SIX10, partial [Squalus acanthias]
          Length = 153

 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 110/153 (71%), Positives = 133/153 (86%), Gaps = 4/153 (2%)

Query: 238 ERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKL 293
           ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH GNF++LY ILE+H+F+  +H KL
Sbjct: 1   ERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHTGNFRELYHILENHKFTKESHGKL 60

Query: 294 QALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 353
           QALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY
Sbjct: 61  QALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWY 120

Query: 354 THNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
             +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 121 LQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 153



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 83  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 142

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 143 TQVGNWFKN 151


>gi|195455202|ref|XP_002074608.1| GK23166 [Drosophila willistoni]
 gi|194170693|gb|EDW85594.1| GK23166 [Drosophila willistoni]
          Length = 490

 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 29  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 88

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 89  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 148

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 149 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 208

Query: 385 R 385
           R
Sbjct: 209 R 209



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 140 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 199

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 200 TQVGNWF 206


>gi|195383344|ref|XP_002050386.1| GJ22125 [Drosophila virilis]
 gi|194145183|gb|EDW61579.1| GJ22125 [Drosophila virilis]
          Length = 481

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 R 385
           R
Sbjct: 207 R 207



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|7592989|dbj|BAA94484.1| homeodomain protein OPTX2 [Homo sapiens]
 gi|7592991|dbj|BAA94485.1| homeodomain protein OPTX2 [Pan troglodytes]
 gi|7592993|dbj|BAA94486.1| homeodomain protein OPTX2 [Gorilla gorilla]
 gi|7592995|dbj|BAA94487.1| homeodomain protein OPTX2 [Pongo pygmaeus]
          Length = 165

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 108/162 (66%), Positives = 138/162 (85%), Gaps = 4/162 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 371
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+AT
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQAT 165



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/56 (66%), Positives = 50/56 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 181
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+AT
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQAT 165


>gi|195120776|ref|XP_002004897.1| GI19347 [Drosophila mojavensis]
 gi|193909965|gb|EDW08832.1| GI19347 [Drosophila mojavensis]
          Length = 501

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 R 385
           R
Sbjct: 207 R 207



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|350645311|emb|CCD60026.1| six/sine homebox transcription factors,putative [Schistosoma
           mansoni]
          Length = 1097

 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 136/174 (78%), Gaps = 4/174 (2%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRG 271
           S  F+ +++  VC+  +++G+IE L RFLWSLP      E L+K+E +L+A+A+ AFH  
Sbjct: 303 SLPFSSQEIIRVCQTFEEAGDIEHLSRFLWSLPLNPNLWEVLNKSEVILRARALAAFHTR 362

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF++LY ILE H FS  +H KLQALWL+AHY EAE LRGRPLG V KYRVR+KFP+PRTI
Sbjct: 363 NFRELYAILERHTFSKSSHVKLQALWLEAHYQEAENLRGRPLGPVDKYRVRKKFPMPRTI 422

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           WDGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT TQV NWFKNR
Sbjct: 423 WDGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELANATGLTPTQVGNWFKNR 476



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT 
Sbjct: 407 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELANATGLTP 466

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 467 TQVGNWF 473


>gi|256072209|ref|XP_002572429.1| six/sine homebox transcription factors [Schistosoma mansoni]
          Length = 1097

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 136/174 (78%), Gaps = 4/174 (2%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRG 271
           S  F+ +++  VC+  +++G+IE L RFLWSLP      E L+K+E +L+A+A+ AFH  
Sbjct: 303 SLPFSSQEIIRVCQTFEEAGDIEHLSRFLWSLPLNPNLWEVLNKSEVILRARALAAFHTR 362

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF++LY ILE H FS  +H KLQALWL+AHY EAE LRGRPLG V KYRVR+KFP+PRTI
Sbjct: 363 NFRELYAILERHTFSKSSHVKLQALWLEAHYQEAENLRGRPLGPVDKYRVRKKFPMPRTI 422

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           WDGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT TQV NWFKNR
Sbjct: 423 WDGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELANATGLTPTQVGNWFKNR 476



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT 
Sbjct: 407 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELANATGLTP 466

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 467 TQVGNWF 473


>gi|195029065|ref|XP_001987395.1| GH21899 [Drosophila grimshawi]
 gi|193903395|gb|EDW02262.1| GH21899 [Drosophila grimshawi]
          Length = 474

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 R 385
           R
Sbjct: 207 R 207



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|194757519|ref|XP_001961012.1| GF13656 [Drosophila ananassae]
 gi|190622310|gb|EDV37834.1| GF13656 [Drosophila ananassae]
          Length = 489

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 29  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 88

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 89  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 148

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 149 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 208

Query: 385 R 385
           R
Sbjct: 209 R 209



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 140 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 199

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 200 TQVGNWF 206


>gi|195581424|ref|XP_002080534.1| GD10533 [Drosophila simulans]
 gi|194192543|gb|EDX06119.1| GD10533 [Drosophila simulans]
          Length = 292

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 R 385
           R
Sbjct: 207 R 207



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 6/117 (5%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGR 242
           TQV NWF +         + +        P+ G  +       EV   +G  +R GR
Sbjct: 198 TQVGNWFKNRRQRDRAAAAKNRK------PTLGQNRSAPRKSMEVAAGAGKRDREGR 248


>gi|5106876|gb|AAD39863.1|AF099184_1 homeobox protein SIX3 [Drosophila melanogaster]
          Length = 292

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 6/181 (3%)

Query: 211 SPIL--PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKN---ESVLKAKA 264
           SPIL  P+  F+  QV  VC+ L+ SG+IERL RFLWSLP A   +H+    E+VL+A+A
Sbjct: 27  SPILAVPTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARA 86

Query: 265 MVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRK 324
           +VA+H GNF++LY I+E+H+F+  ++ KLQA+WL+AHY+EAEKLRGR LG V KYRVR+K
Sbjct: 87  VVAYHVGNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKK 146

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           FPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKN
Sbjct: 147 FPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 206

Query: 385 R 385
           R
Sbjct: 207 R 207



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP TIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  
Sbjct: 138 VDKYRVRKKFPLPPTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNP 197

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 198 TQVGNWF 204


>gi|313228937|emb|CBY18089.1| unnamed protein product [Oikopleura dioica]
          Length = 208

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/184 (58%), Positives = 146/184 (79%), Gaps = 4/184 (2%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGN 272
           F F+   V+ +C VL+++G+ +RL RFLWSLPA     + L  +E++L+A+A+VA+H+GN
Sbjct: 24  FPFSPASVSQLCAVLEETGDFDRLARFLWSLPALPPILDALANDETLLRARAVVAYHQGN 83

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F+++YRI+ES +FS  +H KLQ LWL+AHY EAE  RGR LG V KYR+R+K+PLPRTIW
Sbjct: 84  FREMYRIVESKRFSKVHHSKLQELWLEAHYGEAEATRGRSLGPVDKYRIRKKYPLPRTIW 143

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT TQV NWFKNRRQRDRAA
Sbjct: 144 DGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTPTQVGNWFKNRRQRDRAA 203

Query: 393 EQKD 396
             K+
Sbjct: 204 ATKN 207



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLPRTIWDGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT 
Sbjct: 127 VDKYRIRKKYPLPRTIWDGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTP 186

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 187 TQVGNWF 193


>gi|56694866|gb|AAW23095.1| Six36b, partial [Oikopleura dioica]
          Length = 205

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/184 (58%), Positives = 146/184 (79%), Gaps = 4/184 (2%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGN 272
           F F+   V+ +C VL+++G+ +RL RFLWSLPA     + L  +E++L+A+A+VA+H+GN
Sbjct: 21  FPFSPASVSQLCAVLEETGDFDRLARFLWSLPALPPILDALANDETLLRARAVVAYHQGN 80

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F+++YRI+ES +FS  +H KLQ LWL+AHY EAE  RGR LG V KYR+R+K+PLPRTIW
Sbjct: 81  FREMYRIVESKRFSKVHHSKLQELWLEAHYGEAEATRGRSLGPVDKYRIRKKYPLPRTIW 140

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT TQV NWFKNRRQRDRAA
Sbjct: 141 DGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTPTQVGNWFKNRRQRDRAA 200

Query: 393 EQKD 396
             K+
Sbjct: 201 ATKN 204



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 58/69 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLPRTIWDGE+ S+CFKE++R++LR+ Y  +PYP+P +KRELAE T LT 
Sbjct: 124 VDKYRIRKKYPLPRTIWDGEQKSHCFKERTRTLLRESYIKDPYPNPTKKRELAEQTNLTP 183

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 184 TQVGNWFKN 192


>gi|395854168|ref|XP_003799570.1| PREDICTED: homeobox protein SIX5 [Otolemur garnettii]
          Length = 737

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 2/189 (1%)

Query: 215 PSFG--FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGN 272
           PS G  F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG 
Sbjct: 79  PSTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGE 138

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           + +LYR+LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIW
Sbjct: 139 YAELYRLLESRPFPVAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIW 198

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR  
Sbjct: 199 DGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTG 258

Query: 393 EQKDGSVHS 401
               G   S
Sbjct: 259 AGGGGPCKS 267



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 182 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|5106936|gb|AAD39896.1|AF108811_1 homeobox protein SIX6.1 [Xenopus laevis]
          Length = 153

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 4/153 (2%)

Query: 238 ERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKL 293
           ERLG FLWSLP    ACE L+KNESVL+A+A+VAFH GNF++LY ILE+H+F+  +H KL
Sbjct: 1   ERLGSFLWSLPVAPAACEALNKNESVLRARAIVAFHTGNFRELYHILENHKFTKDSHTKL 60

Query: 294 QALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 353
           QALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY
Sbjct: 61  QALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWY 120

Query: 354 THNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
             +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 121 LQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 153



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 83  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 142

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 143 TQVGNWFKN 151


>gi|118344364|ref|NP_001072005.1| transcription factor protein [Ciona intestinalis]
 gi|70571157|dbj|BAE06689.1| transcription factor protein [Ciona intestinalis]
          Length = 555

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 114/196 (58%), Positives = 139/196 (70%)

Query: 204 STSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAK 263
           S S  +++  L S  FT +QV+C+C+ L Q   I+ L  FL +LP       NE++LKA+
Sbjct: 91  SQSECTVTSNLESSAFTLDQVSCICQDLLQRRQIDCLSSFLVTLPKHLLYGANENMLKAR 150

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRR 323
           A+VAF +  F DLY++LESH FSP NH  LQ LW  AHY EAEK RGRPLGAV KYR+RR
Sbjct: 151 ALVAFKQRKFTDLYQLLESHTFSPSNHKLLQNLWYSAHYAEAEKARGRPLGAVDKYRIRR 210

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KF LPRTIWDGEE  YCFKEKSR  L++ Y  N YP+P +KR LAE TGL+  QVSNWFK
Sbjct: 211 KFSLPRTIWDGEEMVYCFKEKSRLALKECYKKNKYPTPDDKRHLAEDTGLSILQVSNWFK 270

Query: 384 NRRQRDRAAEQKDGSV 399
           NRRQRDR+ + K  +V
Sbjct: 271 NRRQRDRSPQNKKQNV 286



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 52/67 (77%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKF LPRTIWDGEE  YCFKEKSR  L++ Y  N YP+P +KR LAE TGL+ 
Sbjct: 203 VDKYRIRRKFSLPRTIWDGEEMVYCFKEKSRLALKECYKKNKYPTPDDKRHLAEDTGLSI 262

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 263 LQVSNWF 269


>gi|345480843|ref|XP_001606147.2| PREDICTED: hypothetical protein LOC100122540 [Nasonia vitripennis]
          Length = 463

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 110/198 (55%), Positives = 149/198 (75%), Gaps = 5/198 (2%)

Query: 198 TSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE 257
           T+SP T   + ++   + +  +  E+VAC+CE L Q  +IE+L +F++SLP    +  +E
Sbjct: 79  TASPATIFGSGNV---VGAQSYDPEKVACICEALLQRRDIEKLSQFIYSLPKQRMM--SE 133

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           SVL A A VAFHR N+ ++Y+ILES+QFS   HP+LQ +W K+HY+E EK+RGRPLGAV 
Sbjct: 134 SVLVASATVAFHRRNYYEVYKILESNQFSQRRHPELQQMWFKSHYLEQEKVRGRPLGAVD 193

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ L++ TGLT TQ
Sbjct: 194 KYRLRKKFPLPKTIWDGEETIYCFKERSRNALKEMYLKNRYPNPEEKKNLSKKTGLTLTQ 253

Query: 378 VSNWFKNRRQRDRAAEQK 395
           VSNWFKNRRQRDR  + +
Sbjct: 254 VSNWFKNRRQRDRTPQPR 271



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L++ Y  N YP+P EK+ L++ TGLT 
Sbjct: 192 VDKYRLRKKFPLPKTIWDGEETIYCFKERSRNALKEMYLKNRYPNPEEKKNLSKKTGLTL 251

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 252 TQVSNWF 258


>gi|348557656|ref|XP_003464635.1| PREDICTED: homeobox protein SIX5-like [Cavia porcellus]
          Length = 734

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 84  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 143

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 144 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 203

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 204 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 255



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 181 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 240

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 241 TQVSNWF 247


>gi|296234134|ref|XP_002762295.1| PREDICTED: homeobox protein SIX5 [Callithrix jacchus]
          Length = 737

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 85  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 144

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 145 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 204

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 205 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 256



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 182 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|393906428|gb|EJD74276.1| Six3/6 [Loa loa]
          Length = 504

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 103/174 (59%), Positives = 135/174 (77%), Gaps = 7/174 (4%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLP-------ACEKLHKNESVLKAKAMVAFHRG 271
           FT EQ+  +CE L+ +GNIERL  FLWS+            L  +ES+L+A+A+V FH G
Sbjct: 51  FTGEQIVKICEQLEDAGNIERLAAFLWSISHQQHTDEVTTILRNHESILRARALVCFHMG 110

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF+++YRILESH+F+  +H KLQA+W +AHY EAEKLRGRPLG V KYRVR+K+P+PRTI
Sbjct: 111 NFQEMYRILESHKFTNGSHSKLQAMWQEAHYQEAEKLRGRPLGPVDKYRVRKKYPMPRTI 170

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           WDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT  QV NWFKNR
Sbjct: 171 WDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTAMQVGNWFKNR 224



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT 
Sbjct: 155 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTA 214

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 215 MQVGNWF 221


>gi|329664814|ref|NP_001192695.1| homeobox protein SIX5 [Bos taurus]
 gi|296477568|tpg|DAA19683.1| TPA: SIX homeobox 5-like [Bos taurus]
          Length = 738

 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 86  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 257



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 183 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|403299418|ref|XP_003940484.1| PREDICTED: homeobox protein SIX5 [Saimiri boliviensis boliviensis]
          Length = 721

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 70  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 129

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 130 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 189

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 190 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 241



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 167 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 226

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 227 TQVSNWF 233


>gi|402905979|ref|XP_003915785.1| PREDICTED: homeobox protein SIX5 [Papio anubis]
          Length = 741

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 88  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 147

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 148 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 207

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 208 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 259



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 185 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 244

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 245 TQVSNWF 251


>gi|388490110|ref|NP_001252681.1| homeobox protein SIX5 [Macaca mulatta]
 gi|387541368|gb|AFJ71311.1| homeobox protein SIX5 [Macaca mulatta]
          Length = 740

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 87  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 146

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 147 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 206

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 207 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 258



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 184 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|324514259|gb|ADY45809.1| Homeobox protein SIX3 [Ascaris suum]
          Length = 430

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/202 (54%), Positives = 148/202 (73%), Gaps = 17/202 (8%)

Query: 201 PNTSTSTASISPILPSF----------GFTQEQVACVCEVLQQSGNIERLGRFLWSL--- 247
           P  S+   ++ P+  SF           F+ EQ+  VCE L+++GN+ERL  FLW++   
Sbjct: 24  PQGSSLFPAVRPLTNSFPGTTTHPETSAFSAEQIVKVCEQLEEAGNVERLAAFLWTVSHQ 83

Query: 248 PACEK----LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYV 303
           P  E+    L  +ESVL+AKA+V FH GNF+++YRILESH+F+  +H KLQA+W +AHY 
Sbjct: 84  PYGEEVSNVLRAHESVLRAKALVCFHMGNFQEMYRILESHKFTNGSHSKLQAMWQEAHYQ 143

Query: 304 EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPRE 363
           EAEKLRGRPLG V KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +
Sbjct: 144 EAEKLRGRPLGPVDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSK 203

Query: 364 KRELAEATGLTTTQVSNWFKNR 385
           K+ELA  TGLT  QV NWFKNR
Sbjct: 204 KKELASKTGLTAMQVGNWFKNR 225



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT 
Sbjct: 156 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTA 215

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 216 MQVGNWF 222


>gi|40354216|ref|NP_787071.2| homeobox protein SIX5 [Homo sapiens]
 gi|119577783|gb|EAW57379.1| sine oculis homeobox homolog 5 (Drosophila) [Homo sapiens]
 gi|162317604|gb|AAI56209.1| SIX homeobox 5 [synthetic construct]
 gi|162318078|gb|AAI56984.1| SIX homeobox 5 [synthetic construct]
          Length = 739

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 86  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 257



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 183 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|114677805|ref|XP_512758.2| PREDICTED: homeobox protein SIX5 [Pan troglodytes]
          Length = 709

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 56  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 115

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 116 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 175

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 176 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 227



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 153 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 212

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 213 TQVSNWF 219


>gi|47225024|emb|CAF97439.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 230

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLHKNESVLKAKAMVAFHRGNFK 274
           +  F+ EQ++C+CE L Q+GN++RL  FL ++P + + L  NE++LKA+A+VAFHR  FK
Sbjct: 45  ALSFSTEQISCLCEALLQAGNVDRLWSFLSTIPLSSDLLRGNETLLKARALVAFHREEFK 104

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILES+ F P NH  LQ L+LKA Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 105 ELYAILESYAFQPSNHGFLQDLYLKARYKEAERTRGRSLGAVDKYRLRKKFPLPKTIWDG 164

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EET YCFKEKSR+ L++ Y  N YP+P EK+ L + TGL+ TQVSNWFKNRRQRDR
Sbjct: 165 EETVYCFKEKSRNALKECYKRNRYPTPDEKKNLTKVTGLSLTQVSNWFKNRRQRDR 220



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 55/67 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKEKSR+ L++ Y  N YP+P EK+ L + TGL+ 
Sbjct: 146 VDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKRNRYPTPDEKKNLTKVTGLSL 205

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 206 TQVSNWF 212


>gi|208967420|dbj|BAG73724.1| SIX homeobox 5 [synthetic construct]
          Length = 739

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 86  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 257



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 183 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|297705204|ref|XP_002829472.1| PREDICTED: homeobox protein SIX5 [Pongo abelii]
          Length = 738

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 85  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 144

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 145 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 204

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 205 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 256



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 182 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|150421671|sp|Q8N196.3|SIX5_HUMAN RecName: Full=Homeobox protein SIX5; AltName: Full=DM
           locus-associated homeodomain protein; AltName: Full=Sine
           oculis homeobox homolog 5
          Length = 739

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 86  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 257



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 183 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 242

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 243 TQVSNWF 249


>gi|410982776|ref|XP_003997724.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX5 [Felis catus]
          Length = 774

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 128 FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 187

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 188 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 247

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 248 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 299



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 225 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 284

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 285 TQVSNWF 291


>gi|126329575|ref|XP_001364549.1| PREDICTED: homeobox protein SIX5-like [Monodelphis domestica]
          Length = 750

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 134/173 (77%), Gaps = 1/173 (0%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKN-ESVLKAKAMVAFHRGNFKDLY 277
           F+ EQV+CVCE L Q+G+  RLGRFL +LP  E+L    +++L+A+A+VAF RG+F +LY
Sbjct: 97  FSAEQVSCVCEALLQAGHAGRLGRFLGALPPAERLRGGSDALLRARALVAFQRGDFAELY 156

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
           R+LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET
Sbjct: 157 RLLESRPFPAAHHAFLQDLYLRARYREAERARGRALGAVDKYRLRKKFPLPKTIWDGEET 216

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
            YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 217 VYCFKERSRAALKACYRGNRYPAPDEKRRLAALTGLSLTQVSNWFKNRRQRDR 269



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 195 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPAPDEKRRLAALTGLSL 254

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 255 TQVSNWF 261


>gi|349986047|dbj|GAA36269.1| homeobox protein SIX6 [Clonorchis sinensis]
          Length = 406

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 135/173 (78%), Gaps = 4/173 (2%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFHRGN 272
             F  +++  VC+  +++G+I+ L RFLWSLP      E L++++ +L+A+A+VAFH GN
Sbjct: 222 LSFAPQEIIRVCQTFEEAGDIDHLSRFLWSLPLHASLWEVLNRSDVILRARALVAFHTGN 281

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           F++LY ILE H F    H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFP+PRTIW
Sbjct: 282 FRELYAILERHTFPKSVHGKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPMPRTIW 341

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           DGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT TQV NWFKNR
Sbjct: 342 DGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELATATGLTPTQVGNWFKNR 394



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++R +LR+WY  +PYPSP +KRELA ATGLT 
Sbjct: 325 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPSPAKKRELATATGLTP 384

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 385 TQVGNWF 391


>gi|392337475|ref|XP_003753269.1| PREDICTED: homeobox protein SIX5 [Rattus norvegicus]
          Length = 720

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/172 (61%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LY+
Sbjct: 78  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYQ 137

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 138 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 197

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 198 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 249



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 175 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 234

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 235 TQVSNWF 241


>gi|73532776|ref|NP_035513.1| homeobox protein SIX5 [Mus musculus]
 gi|46397842|sp|P70178.2|SIX5_MOUSE RecName: Full=Homeobox protein SIX5; AltName: Full=DM
           locus-associated homeodomain protein homolog; AltName:
           Full=Sine oculis homeobox homolog 5
          Length = 719

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/172 (61%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LY+
Sbjct: 79  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYQ 138

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 139 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 198

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 199 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 250



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 176 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 235

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 236 TQVSNWF 242


>gi|1542813|dbj|BAA11824.1| Six5 [Mus musculus]
 gi|148691161|gb|EDL23108.1| sine oculis-related homeobox 5 homolog (Drosophila) [Mus musculus]
          Length = 667

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/172 (61%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LY+
Sbjct: 27  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYQ 86

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 87  LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 146

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 147 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 198



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 124 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 183

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 184 TQVSNWF 190


>gi|345785616|ref|XP_855072.2| PREDICTED: homeobox protein SIX5 [Canis lupus familiaris]
          Length = 620

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 132/172 (76%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR
Sbjct: 87  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 146

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 147 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 206

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 207 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 258



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 184 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 243

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 244 TQVSNWF 250


>gi|402230882|emb|CCG27799.1| sine oculis homeobox homolog 1/2 protein, partial [Botryllus
           schlosseri]
          Length = 182

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 109/138 (78%), Positives = 118/138 (85%), Gaps = 4/138 (2%)

Query: 196 NITSSPNTSTSTASISPILPS----FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE 251
           N+  SP    S + +  ILPS    FGFTQEQVACVCEVLQQ GNIERL RFLWSLPACE
Sbjct: 45  NVHLSPLNMASHSGMQAILPSAPPSFGFTQEQVACVCEVLQQGGNIERLARFLWSLPACE 104

Query: 252 KLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGR 311
            LHKNESVLKAKA+VAFHRGNF++LY++LESH FS HNHPKLQ LWLKAHY+EAEKLRGR
Sbjct: 105 HLHKNESVLKAKAVVAFHRGNFRELYKLLESHTFSQHNHPKLQQLWLKAHYIEAEKLRGR 164

Query: 312 PLGAVGKYRVRRKFPLPR 329
           PLGAVGKYRVRRKFPLPR
Sbjct: 165 PLGAVGKYRVRRKFPLPR 182


>gi|402595126|gb|EJW89052.1| Six3 family protein [Wuchereria bancrofti]
          Length = 246

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 114/188 (60%), Positives = 147/188 (78%), Gaps = 7/188 (3%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEK-------LHKNESVLKAKAMVAFHRG 271
           FT EQ+  +CE L+ +GNIERL  FLWS+   +        L  +ESVL+A+A+V FH G
Sbjct: 51  FTGEQIVKICEQLEDAGNIERLAAFLWSISHQQHTDEVTTVLRNHESVLRARALVCFHMG 110

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF+++YRILESH+F+  +H KLQA+W +AHY EAEKLRGRPLG V KYRVR+K+P+PRTI
Sbjct: 111 NFQEMYRILESHKFTNGSHSKLQAMWQEAHYQEAEKLRGRPLGPVDKYRVRKKYPMPRTI 170

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           WDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT  QV NWFKNRRQRDRA
Sbjct: 171 WDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTAMQVGNWFKNRRQRDRA 230

Query: 392 AEQKDGSV 399
           A  K+ SV
Sbjct: 231 AAAKNKSV 238



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 58/69 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT 
Sbjct: 155 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTA 214

Query: 186 TQVSNWFSS 194
            QV NWF +
Sbjct: 215 MQVGNWFKN 223


>gi|47210691|emb|CAF93760.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 207

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 4/176 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+  Q+A VC  L+++G++ERL RFLW+LP    A + + + E V +A+A+VA+H
Sbjct: 1   LPGLCFSAAQIASVCATLEETGDVERLARFLWALPGSGDARDSISEQEPVQRARALVAYH 60

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G F +LYRILE+H+F+  +H KLQA+WL+AHY EAE LRGRPLG V KYRVR+KFPLP+
Sbjct: 61  AGRFGELYRILETHRFTRASHGKLQAMWLEAHYREAEALRGRPLGPVDKYRVRKKFPLPK 120

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           TIWDGE  ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNR
Sbjct: 121 TIWDGEHKTHCFKERTRGLLREWYLQDPYPNPAKKRELAHATGLTPTQVGNWFKNR 176



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLP+TIWDGE  ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 107 VDKYRVRKKFPLPKTIWDGEHKTHCFKERTRGLLREWYLQDPYPNPAKKRELAHATGLTP 166

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 167 TQVGNWFKN 175


>gi|351715383|gb|EHB18302.1| Homeobox protein SIX3 [Heterocephalus glaber]
          Length = 360

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 103/148 (69%), Positives = 129/148 (87%), Gaps = 4/148 (2%)

Query: 241 GRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQAL 296
           GRFLWSLP    ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H KLQA+
Sbjct: 86  GRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAM 145

Query: 297 WLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN 356
           WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +
Sbjct: 146 WLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQD 205

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKN 384
           PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 206 PYPNPSKKRELAQATGLTPTQVGNWFKN 233



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 78/123 (63%), Gaps = 10/123 (8%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 165 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 224

Query: 186 TQVSNWFSSANITSSPNTSTSTASISPILPS---FGFTQEQVACVCEVLQQSGNIERLGR 242
           TQV NWF +         + ++  + P  P     GF    V     V   SG   +LG+
Sbjct: 225 TQVGNWFKNRRQRDRAAAAKNSLLLQPRPPQAARLGFYLSSVV----VRSLSG---KLGK 277

Query: 243 FLW 245
             W
Sbjct: 278 LSW 280


>gi|47155922|gb|AAT11875.1| sine oculis-like transcription factor Six4/5 [Cladonema radiatum]
          Length = 214

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 112/205 (54%), Positives = 144/205 (70%), Gaps = 9/205 (4%)

Query: 198 TSSPNTSTSTAS------ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACE 251
           TS  N ST T +       S ++    +T EQ+ CVC+VL QS + + L +FLWSLP  +
Sbjct: 7   TSHSNNSTGTTNQELEKHASAVI---NYTIEQIDCVCDVLTQSQDFDTLAKFLWSLPVND 63

Query: 252 KLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGR 311
            ++ +E VLKA+A V  H+  +K+LY +LE+H+FS   H  +Q +W  AHY EAEK+RGR
Sbjct: 64  LVNGSECVLKARAHVFLHQSRYKELYSLLETHKFSSDLHQLMQQMWHDAHYSEAEKVRGR 123

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEAT 371
           PLGAV KYR  RK+PLPRTIWDGEET YCFKEKSR +LR+WY  N YP+P++KR LA+ T
Sbjct: 124 PLGAVEKYRHHRKYPLPRTIWDGEETIYCFKEKSRQMLREWYEKNKYPTPQDKRLLAKRT 183

Query: 372 GLTTTQVSNWFKNRRQRDRAAEQKD 396
            LT  QVSNWFKNRRQRD+   + D
Sbjct: 184 ELTLVQVSNWFKNRRQRDKPQNEID 208



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 56/76 (73%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR  RK+PLPRTIWDGEET YCFKEKSR +LR+WY  N YP+P++KR LA+ T LT 
Sbjct: 128 VEKYRHHRKYPLPRTIWDGEETIYCFKEKSRQMLREWYEKNKYPTPQDKRLLAKRTELTL 187

Query: 186 TQVSNWFSSANITSSP 201
            QVSNWF +      P
Sbjct: 188 VQVSNWFKNRRQRDKP 203


>gi|47155920|gb|AAT11874.1| sine oculis-like transcription factor Six3/6 [Cladonema radiatum]
          Length = 327

 Score =  230 bits (587), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 101/173 (58%), Positives = 139/173 (80%), Gaps = 4/173 (2%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAFHRG 271
           SF F+ +Q+  VCE L++ G++ERL RFLWSLP+     E ++ NE+VL+++A+VAF+  
Sbjct: 21  SFPFSADQIVKVCETLEECGDVERLSRFLWSLPSNRDVSELVNTNETVLRSRALVAFNNH 80

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           +F +LY ILE  +FS  +H K+QA+WL+AHY+EAE+LRGRPLG V KYRVR++FPLPRTI
Sbjct: 81  HFHELYYILEHFRFSKKSHSKMQAMWLEAHYIEAERLRGRPLGPVDKYRVRKRFPLPRTI 140

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           WDGE+ ++CFKE++R +LR++Y  +PYPSP +KR+LA AT LT TQV NWFKN
Sbjct: 141 WDGEQKTHCFKERTRKLLREFYLQDPYPSPSKKRDLANATHLTPTQVGNWFKN 193



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR++FPLPRTIWDGE+ ++CFKE++R +LR++Y  +PYPSP +KR+LA AT LT 
Sbjct: 125 VDKYRVRKRFPLPRTIWDGEQKTHCFKERTRKLLREFYLQDPYPSPSKKRDLANATHLTP 184

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 185 TQVGNWF 191


>gi|170582999|ref|XP_001896387.1| Homeobox protein ceh-32 [Brugia malayi]
 gi|158596446|gb|EDP34787.1| Homeobox protein ceh-32, putative [Brugia malayi]
          Length = 259

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/174 (59%), Positives = 136/174 (78%), Gaps = 7/174 (4%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEK-------LHKNESVLKAKAMVAFHRG 271
           FT EQ+  +CE L+ +GNIERL  FLWS+   +        L  +ESVL+A+A+V FH G
Sbjct: 51  FTGEQIVKICEQLEDAGNIERLAAFLWSISHQQHTDEVTTVLRNHESVLRARALVCFHMG 110

Query: 272 NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI 331
           NF+++YRILESH+F+  +H KLQA+W +AHY EAEKLRGRPLG V KYRVR+K+P+PRTI
Sbjct: 111 NFQEMYRILESHKFTNGSHSKLQAMWQEAHYQEAEKLRGRPLGPVDKYRVRKKYPMPRTI 170

Query: 332 WDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           WDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT  QV NWFKNR
Sbjct: 171 WDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTAMQVGNWFKNR 224



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT 
Sbjct: 155 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTA 214

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 215 MQVGNWF 221


>gi|195348359|ref|XP_002040716.1| GM22186 [Drosophila sechellia]
 gi|194122226|gb|EDW44269.1| GM22186 [Drosophila sechellia]
          Length = 383

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/201 (56%), Positives = 144/201 (71%), Gaps = 10/201 (4%)

Query: 195 ANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLH 254
           +N+T++ N S + +S         F+ +Q+ C+CE LQQ G+IE+L  FL SLP  E   
Sbjct: 158 SNLTAAHNMS-AVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFK 216

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
            NESVL+A+AMVA++ G F +LY +LE+H FS   H         AHY EAEK+RGRPLG
Sbjct: 217 TNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYH---------AHYKEAEKVRGRPLG 267

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
           AV KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT
Sbjct: 268 AVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLT 327

Query: 375 TTQVSNWFKNRRQRDRAAEQK 395
            TQVSNWFKNRRQRDR  +Q+
Sbjct: 328 LTQVSNWFKNRRQRDRTPQQR 348



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP+TIWDGEET YCFKEKSR+ L+D Y  N YP+P EK+ LA+ TGLT 
Sbjct: 269 VDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTL 328

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 329 TQVSNWF 335


>gi|6138948|gb|AAF04403.1|AF032107_1 AREC3 [Homo sapiens]
          Length = 157

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/157 (68%), Positives = 124/157 (78%)

Query: 223 QVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
            VACVCE LQ+ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +LY ILES
Sbjct: 1   HVACVCEALQEGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILES 60

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           H F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEET YCFK
Sbjct: 61  HSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFK 120

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVS 379
           EKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVS
Sbjct: 121 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVS 157



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 53/64 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 94  VDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSL 153

Query: 186 TQVS 189
           TQVS
Sbjct: 154 TQVS 157


>gi|348020115|gb|AEP43999.1| sine oculis-like transcription factor Six3/6A [Craspedacusta
           sowerbyi]
          Length = 322

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/170 (59%), Positives = 136/170 (80%), Gaps = 4/170 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKL----HKNESVLKAKAMVAFHRGNFK 274
            + EQ++ VCE L++ G+IERL RFLWSLP   +L    + NE++L+A+A+V+FH  NF 
Sbjct: 53  ISSEQISRVCETLEECGDIERLSRFLWSLPNAPELMDVMNGNETILRARALVSFHHSNFN 112

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ILE  +FS  +H KLQA+WL+AHY+EAE++RGRPLG V KYRVR++FPLPRTIWDG
Sbjct: 113 ELYHILEHFRFSKKSHAKLQAMWLEAHYMEAERIRGRPLGPVDKYRVRKRFPLPRTIWDG 172

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           E+ ++CFKE++R +LR++Y  +PYPSP +KRELA+ T LT TQV NWFKN
Sbjct: 173 EQKTHCFKERTRKLLREFYLQDPYPSPSKKRELADVTHLTPTQVGNWFKN 222



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR++FPLPRTIWDGE+ ++CFKE++R +LR++Y  +PYPSP +KRELA+ T LT 
Sbjct: 154 VDKYRVRKRFPLPRTIWDGEQKTHCFKERTRKLLREFYLQDPYPSPSKKRELADVTHLTP 213

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 214 TQVGNWF 220


>gi|25992267|gb|AAN77127.1| six3 [Girardia tigrina]
          Length = 264

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/200 (57%), Positives = 155/200 (77%), Gaps = 9/200 (4%)

Query: 207 TASISPILPSFG-----FTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNE 257
           T  +S +L  F      F+ +Q+  VCE L+++G+I+RL RFLWSLP+     E L + E
Sbjct: 5   TNKLSNLLSPFMNHTQLFSADQITKVCETLEEAGDIDRLSRFLWSLPSFNALWESLSRRE 64

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           S+ +A+A+VAFH GNF++LY ++E ++F+  +H KLQALWL+AHY EAE+LRGR LG V 
Sbjct: 65  SIQRARALVAFHVGNFRELYNLIEKNRFTKASHSKLQALWLEAHYQEAERLRGRSLGPVD 124

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYRVR+KFP+PRTIWDGE+ ++CFKE++R++LR+ Y  +PYP+P +KR+LA ATGLT TQ
Sbjct: 125 KYRVRKKFPMPRTIWDGEQKTHCFKERTRNLLRECYLDDPYPNPSKKRQLASATGLTPTQ 184

Query: 378 VSNWFKNRRQRDRAAEQKDG 397
           V NWFKNRRQRDRAA  K+G
Sbjct: 185 VGNWFKNRRQRDRAAAAKNG 204



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++R++LR+ Y  +PYP+P +KR+LA ATGLT 
Sbjct: 123 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRNLLRECYLDDPYPNPSKKRQLASATGLTP 182

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 183 TQVGNWF 189


>gi|386783957|gb|AFJ24873.1| six3-1, partial [Schmidtea mediterranea]
          Length = 350

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 110/183 (60%), Positives = 149/183 (81%), Gaps = 4/183 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGNFK 274
           F+ EQ+  VCE L+++G+I+RL RFLWSLP+     + L + ES+ +A+A+VAFH GNF+
Sbjct: 21  FSVEQITKVCETLEEAGDIDRLSRFLWSLPSFSSLWDSLSRQESIQRARALVAFHVGNFR 80

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ++E ++F+  +H KLQALWL+AHY EAE+LRGR LG V KYRVR+KFP+PRTIWDG
Sbjct: 81  ELYNLIEKNRFTKASHSKLQALWLEAHYQEAERLRGRSLGPVDKYRVRKKFPMPRTIWDG 140

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           E+ ++CFKE++R++LR+ Y  +PYP+P +KR+LA ATGLT TQV NWFKNRRQRDRAA  
Sbjct: 141 EQKTHCFKERTRNLLRECYLDDPYPNPSKKRQLASATGLTPTQVGNWFKNRRQRDRAAAA 200

Query: 395 KDG 397
           K+G
Sbjct: 201 KNG 203



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++R++LR+ Y  +PYP+P +KR+LA ATGLT 
Sbjct: 122 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRNLLRECYLDDPYPNPSKKRQLASATGLTP 181

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 182 TQVGNWF 188


>gi|144369360|dbj|BAF56227.1| Six-C [Sycon calcaravis]
          Length = 592

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 144/190 (75%), Gaps = 7/190 (3%)

Query: 216 SFG-FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRG--- 271
           +FG FT EQ+A + E +  + ++  L R+L SLP C +L  +ES+L AKA VA+H G   
Sbjct: 40  NFGCFTLEQLALITEYIVLTKDVAHLERYLISLPNCPRLQSHESILIAKAKVAYHAGCST 99

Query: 272 -NFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLR-GRPLGAVGKYRVRRKFPLPR 329
            +FK LY ILE+  FS  + P+LQ +W  AHY EAE+ R G+PLGAVGKYR+RRK+P PR
Sbjct: 100 GDFKRLYHILETETFSERSFPRLQEMWTNAHYKEAERQRDGKPLGAVGKYRIRRKYPFPR 159

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
            IWDGEET+YCFKEKSR++LR  Y  +PYPSP++K+ELAEAT L+ TQVSNWFKNRRQRD
Sbjct: 160 NIWDGEETNYCFKEKSRAMLRTRYEKSPYPSPQQKKELAEATELSVTQVSNWFKNRRQRD 219

Query: 390 RAAE-QKDGS 398
           RAA+ ++DG 
Sbjct: 220 RAADSRQDGG 229



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+P PR IWDGEET+YCFKEKSR++LR  Y  +PYPSP++K+ELAEAT L+ 
Sbjct: 146 VGKYRIRRKYPFPRNIWDGEETNYCFKEKSRAMLRTRYEKSPYPSPQQKKELAEATELSV 205

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 206 TQVSNWF 212


>gi|47155916|gb|AAT11872.1| sine oculis-like transcription factor Six3/6 [Podocoryna carnea]
          Length = 290

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 106/188 (56%), Positives = 146/188 (77%), Gaps = 7/188 (3%)

Query: 201 PNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKN 256
           P+  +S  + S  LP   F+ EQ++ VCE L++ G+IERL RFLWSLP      E ++ N
Sbjct: 2   PHLCSSLTTGSNPLP---FSAEQISKVCETLEECGDIERLSRFLWSLPNNREVRELINSN 58

Query: 257 ESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAV 316
           E++L+++A+VAFH  +F +LY ILE  +F+  +H KLQA+WL+AHY+EAE+LRGRPLG V
Sbjct: 59  ETILRSRAVVAFHNSHFHELYYILEHFRFNKKSHGKLQAIWLEAHYLEAERLRGRPLGPV 118

Query: 317 GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 376
            KYRVR++FPLPRTIWDGE+ ++CFKE++R +LR++Y  +PYPSP +KR+LA+AT LT T
Sbjct: 119 DKYRVRKRFPLPRTIWDGEQKAHCFKERTRKLLREFYLQDPYPSPSKKRDLADATHLTPT 178

Query: 377 QVSNWFKN 384
           QV NWFKN
Sbjct: 179 QVGNWFKN 186



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 59/69 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR++FPLPRTIWDGE+ ++CFKE++R +LR++Y  +PYPSP +KR+LA+AT LT 
Sbjct: 118 VDKYRVRKRFPLPRTIWDGEQKAHCFKERTRKLLREFYLQDPYPSPSKKRDLADATHLTP 177

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 178 TQVGNWFKN 186


>gi|313239239|emb|CBY14192.1| unnamed protein product [Oikopleura dioica]
          Length = 652

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/223 (48%), Positives = 144/223 (64%), Gaps = 9/223 (4%)

Query: 183 LTTTQVSNWFSSANITSSPNTSTSTASISPILPS---------FGFTQEQVACVCEVLQQ 233
           LT  Q++N    +   + P+       + P+  S           FT  Q+ACVC VL +
Sbjct: 91  LTHEQLANLQHGSGSITDPDIINILTQLDPVSTSNDSGEGPQTLVFTPNQIACVCNVLME 150

Query: 234 SGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKL 293
            G+ E+L +F+ SLP  + L++NE V++A+ +  FH  +FK LY  LES  F+  +H  L
Sbjct: 151 KGDYEKLTKFMLSLPNDKSLYQNEDVVRAQCVALFHINDFKTLYHQLESQHFATEHHQFL 210

Query: 294 QALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 353
           Q LW KAHY+E +++R RPLGAV KYR+RR+FPLPRTIWDGE T YCFKEKSR+VL+  Y
Sbjct: 211 QELWYKAHYLEVQRMRNRPLGAVDKYRIRRRFPLPRTIWDGEHTIYCFKEKSRNVLKTSY 270

Query: 354 THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
             N YPS  E+R LAE TGL+  QVSNWFKNRRQR+R    K+
Sbjct: 271 HRNRYPSQEERRRLAELTGLSMVQVSNWFKNRRQRERVPPPKE 313



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RR+FPLPRTIWDGE T YCFKEKSR+VL+  Y  N YPS  E+R LAE TGL+ 
Sbjct: 233 VDKYRIRRRFPLPRTIWDGEHTIYCFKEKSRNVLKTSYHRNRYPSQEERRRLAELTGLSM 292

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 293 VQVSNWF 299


>gi|56694868|gb|AAW23096.1| Six45 [Oikopleura dioica]
          Length = 652

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/223 (48%), Positives = 144/223 (64%), Gaps = 9/223 (4%)

Query: 183 LTTTQVSNWFSSANITSSPNTSTSTASISPILPS---------FGFTQEQVACVCEVLQQ 233
           LT  Q++N    +   + P+       + P+  S           FT  Q+ACVC VL +
Sbjct: 91  LTHEQLANLQHGSGSITDPDIINILTQLDPVSTSNDSGEGPQTLVFTPNQIACVCNVLME 150

Query: 234 SGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKL 293
            G+ E+L +F+ SLP  + L++NE V++A+ +  FH  +FK LY  LES  F+  +H  L
Sbjct: 151 KGDYEKLTKFMLSLPNDKSLYQNEDVVRAQCVALFHINDFKTLYHQLESQHFATEHHQFL 210

Query: 294 QALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 353
           Q LW KAHY+E +++R RPLGAV KYR+RR+FPLPRTIWDGE T YCFKEKSR+VL+  Y
Sbjct: 211 QELWYKAHYLEVQRMRNRPLGAVDKYRIRRRFPLPRTIWDGEHTIYCFKEKSRNVLKTSY 270

Query: 354 THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
             N YPS  E+R LAE TGL+  QVSNWFKNRRQR+R    K+
Sbjct: 271 HRNRYPSQEERRRLAELTGLSMVQVSNWFKNRRQRERVPPPKE 313



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RR+FPLPRTIWDGE T YCFKEKSR+VL+  Y  N YPS  E+R LAE TGL+ 
Sbjct: 233 VDKYRIRRRFPLPRTIWDGEHTIYCFKEKSRNVLKTSYHRNRYPSQEERRRLAELTGLSM 292

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 293 VQVSNWF 299


>gi|222530730|emb|CAU83351.1| Six3 protein [Parasteatoda tepidariorum]
          Length = 170

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 130/153 (84%), Gaps = 4/153 (2%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA----CEKLHKNESVLKAKAMVAF 268
           +LP+  FT  QVA VCE L++SG+IERLGRFLWSLP     C +L+KNE+VL+A+A+VAF
Sbjct: 18  VLPTLNFTVNQVAAVCETLEESGDIERLGRFLWSLPVAHPNCSELNKNEAVLRARALVAF 77

Query: 269 HRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           H G+F++LY ILESH+F+  +H KLQA+WL+AHY EAEKLRGRPLG V KYRVR+K+PLP
Sbjct: 78  HTGSFRELYHILESHRFTKASHTKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKYPLP 137

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSP 361
           RTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P
Sbjct: 138 RTIWDGEQKTHCFKERTRSLLREWYLQDPYPNP 170



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 42/46 (91%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSP 171
           + KYRVR+K+PLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P
Sbjct: 125 VDKYRVRKKYPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNP 170


>gi|4753723|emb|CAB41947.1| Six4 protein [Gallus gallus]
          Length = 384

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 101/146 (69%), Positives = 117/146 (80%)

Query: 245 WSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVE 304
           WSLP  + L  NES++KA+A+VAFHRG + +LY ILESH F   NHP LQ LW KA Y E
Sbjct: 1   WSLPPSDLLRGNESLMKARALVAFHRGIYAELYSILESHNFDSSNHPLLQELWYKARYTE 60

Query: 305 AEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREK 364
           AE+ RG+PLGAV KYR+RRK+PLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EK
Sbjct: 61  AERARGKPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEK 120

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDR 390
           R LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 121 RNLAKITGLSLTQVSNWFKNRRQRDR 146



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEET YCFKEKSR+ L++ Y  N YPSP EKR LA+ TGL+ 
Sbjct: 72  VDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSL 131

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 132 TQVSNWF 138


>gi|358340586|dbj|GAA48444.1| homeobox protein SIX1, partial [Clonorchis sinensis]
          Length = 448

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/224 (52%), Positives = 146/224 (65%), Gaps = 8/224 (3%)

Query: 170 SPREKRELAEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCE 229
           +P EK E+   T L +     W + +   + P    S  S      S+ FT EQV C+CE
Sbjct: 224 TPHEKSEIYGPTQLYSETEQTW-TESRYRTEPVVYNSLDS-----HSYVFTPEQVECICE 277

Query: 230 VLQQSGNIERLGRFLWSLPACEK--LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
           VL      E+L RF   LP+     L   ESV KA+A++AF  GN+ +L++IL+S +FSP
Sbjct: 278 VLYVRNETEQLRRFFTKLPSHLNPLLENMESVQKARALLAFADGNWDELFQILKSFKFSP 337

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
           H H +LQ LWL+ HY EA   RGRPLG VGKYR+R++FP PRTIWDG+E +YCFKEKSR 
Sbjct: 338 HCHSQLQQLWLEGHYAEASHSRGRPLGPVGKYRIRKRFPWPRTIWDGDEVTYCFKEKSRR 397

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           VLR+ +  NPYPSP EKRELA   GLT TQVSNWFKNRRQR R 
Sbjct: 398 VLRESFLKNPYPSPSEKRELANRIGLTPTQVSNWFKNRRQRGRV 441



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R++FP PRTIWDG+E +YCFKEKSR VLR+ +  NPYPSP EKRELA   GLT 
Sbjct: 366 VGKYRIRKRFPWPRTIWDGDEVTYCFKEKSRRVLRESFLKNPYPSPSEKRELANRIGLTP 425

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 426 TQVSNWF 432


>gi|417412197|gb|JAA52503.1| Putative transcription factor six, partial [Desmodus rotundus]
          Length = 667

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 103/168 (61%), Positives = 129/168 (76%)

Query: 223 QVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILES 282
           +VACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LYR++ES
Sbjct: 16  RVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLIES 75

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
             F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET YCFK
Sbjct: 76  RPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFK 135

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           E+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 136 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 183



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 109 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 168

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 169 TQVSNWF 175


>gi|355565665|gb|EHH22094.1| hypothetical protein EGK_05292, partial [Macaca mulatta]
          Length = 169

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 125/140 (89%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLR 309
           CE ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLR
Sbjct: 30  CEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLR 89

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAE 369
           GRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+
Sbjct: 90  GRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQ 149

Query: 370 ATGLTTTQVSNWFKNRRQRD 389
           ATGLT TQV NWFKNRRQRD
Sbjct: 150 ATGLTPTQVGNWFKNRRQRD 169



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 96  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 155

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 156 TQVGNWFKN 164


>gi|348020117|gb|AEP44000.1| sine oculis-like transcription factor Six3/6B [Craspedacusta
           sowerbyi]
          Length = 305

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 135/167 (80%), Gaps = 4/167 (2%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGNFKDLY 277
           EQ++ VCE L++ G+I+RL RFLWSLP      + ++ NE++L+A+A+V+F+  NF +LY
Sbjct: 51  EQISRVCETLEECGDIQRLSRFLWSLPNAPEMFDVMNGNETILRARALVSFYHNNFNELY 110

Query: 278 RILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEET 337
            ILE  +FS  +H KLQA+WL+AHY+EAE+ RGRPLG V KYRVR++FPLPRTIWDGE+ 
Sbjct: 111 YILEHFRFSKKSHAKLQAMWLEAHYIEAERSRGRPLGPVDKYRVRKRFPLPRTIWDGEQK 170

Query: 338 SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           ++CFKE++R +LR++Y  +PYPSP +KRELA+AT LT TQV NWFKN
Sbjct: 171 THCFKERTRKLLREFYLQDPYPSPSKKRELADATHLTPTQVGNWFKN 217



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 59/69 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR++FPLPRTIWDGE+ ++CFKE++R +LR++Y  +PYPSP +KRELA+AT LT 
Sbjct: 149 VDKYRVRKRFPLPRTIWDGEQKTHCFKERTRKLLREFYLQDPYPSPSKKRELADATHLTP 208

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 209 TQVGNWFKN 217


>gi|49901086|gb|AAH76175.1| Six6b protein [Danio rerio]
          Length = 162

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/152 (65%), Positives = 129/152 (84%), Gaps = 4/152 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG+IERLGRFLWSLP    ACE L++NESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEVLNRNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GNF++LY ILE+H+F+  +H KLQALWL++HY EAEKLRGRPLG V KYRVR+KFPLP+
Sbjct: 64  TGNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLGPVDKYRVRKKFPLPK 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSP 361
           TIWDGE+ ++CFKE++R +LR+WY  +PYP+P
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPYPNP 155



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 41/46 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSP 171
           + KYRVR+KFPLP+TIWDGE+ ++CFKE++R +LR+WY  +PYP+P
Sbjct: 110 VDKYRVRKKFPLPKTIWDGEQKTHCFKERTRHLLREWYLQDPYPNP 155


>gi|196015038|ref|XP_002117377.1| hypothetical protein TRIADDRAFT_32356 [Trichoplax adhaerens]
 gi|190580130|gb|EDV20216.1| hypothetical protein TRIADDRAFT_32356 [Trichoplax adhaerens]
          Length = 213

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 102/171 (59%), Positives = 137/171 (80%), Gaps = 4/171 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGNFK 274
           F+  QVA VCE L+ SG+IERL RFLWSLP+       L  ++++L+A+A+VA+H+G+++
Sbjct: 31  FSVHQVASVCEALESSGDIERLSRFLWSLPSTLDGYTNLLNHDAILRARAVVAYHQGHYR 90

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY I+E+H+F    H KLQ +WL+AHY EAEKLRGR LG V KYR+R+K+PLP TIWDG
Sbjct: 91  ELYGIIENHRFPKDFHGKLQHMWLEAHYREAEKLRGRSLGPVDKYRIRKKYPLPVTIWDG 150

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           E+ ++CFKEK+R++LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNR
Sbjct: 151 EQKTHCFKEKTRNLLREWYLRDPYPNPGKKRELANATGLTPTQVGNWFKNR 201



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 59/69 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K+PLP TIWDGE+ ++CFKEK+R++LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 132 VDKYRIRKKYPLPVTIWDGEQKTHCFKEKTRNLLREWYLRDPYPNPGKKRELANATGLTP 191

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 192 TQVGNWFKN 200


>gi|449666092|ref|XP_002162399.2| PREDICTED: uncharacterized protein LOC100192244 [Hydra
           magnipapillata]
          Length = 477

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/197 (52%), Positives = 145/197 (73%), Gaps = 7/197 (3%)

Query: 192 FSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC- 250
           F ++ ++ +     S A+ S  +P   F+ EQ+  VCE L++ G+IERL RFLWSLP   
Sbjct: 185 FITSPLSYTDRNLYSNATCSTHMP---FSSEQIIKVCETLEECGDIERLSRFLWSLPNTP 241

Query: 251 ---EKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEK 307
                ++ NE++L++++MVAFH  +F++LY ILE  +F    H K+QA+WL+AHY+EAE+
Sbjct: 242 YIRNLINNNETILRSRSMVAFHNRHFEELYFILEHFRFGKKFHSKMQAIWLEAHYIEAEQ 301

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKREL 367
           LRGRPLG V KYRVR++FPLPRTIWDGE+ ++CFKE++R  LR++Y  +PYPSP +KREL
Sbjct: 302 LRGRPLGPVDKYRVRKRFPLPRTIWDGEQKTHCFKERTRKHLREFYLEDPYPSPSKKREL 361

Query: 368 AEATGLTTTQVSNWFKN 384
           A+ T LT TQV NWFKN
Sbjct: 362 ADLTHLTPTQVGNWFKN 378



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 55/65 (84%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYRVR++FPLPRTIWDGE+ ++CFKE++R  LR++Y  +PYPSP +KRELA+ T LT TQ
Sbjct: 312 KYRVRKRFPLPRTIWDGEQKTHCFKERTRKHLREFYLEDPYPSPSKKRELADLTHLTPTQ 371

Query: 188 VSNWF 192
           V NWF
Sbjct: 372 VGNWF 376


>gi|144369369|dbj|BAF56230.1| Six-A [Hydra vulgaris]
          Length = 355

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 103/183 (56%), Positives = 139/183 (75%), Gaps = 7/183 (3%)

Query: 206 STASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLK 261
           S A+ S  +P   F+ EQ+  VCE L++ G+IERL RFLWSLP        ++ NE++L+
Sbjct: 77  SNATCSTHMP---FSSEQIIKVCETLEECGDIERLSRFLWSLPNTPYIRNLINNNETILR 133

Query: 262 AKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRV 321
           +++MVAFH  +F++LY ILE  +F    H K+QA+WL+AHY+EAE+LRGRPLG V KYRV
Sbjct: 134 SRSMVAFHNRHFEELYFILEHFRFGKKFHSKMQAIWLEAHYIEAEQLRGRPLGPVDKYRV 193

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNW 381
           R++FPLPRTIWDGE+ ++CFKE++R  LR++Y  +PYPSP +KRELA+ T LT TQV NW
Sbjct: 194 RKRFPLPRTIWDGEQKTHCFKERTRKHLREFYLEDPYPSPSKKRELADLTHLTPTQVGNW 253

Query: 382 FKN 384
           FKN
Sbjct: 254 FKN 256



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR++FPLPRTIWDGE+ ++CFKE++R  LR++Y  +PYPSP +KRELA+ T LT 
Sbjct: 188 VDKYRVRKRFPLPRTIWDGEQKTHCFKERTRKHLREFYLEDPYPSPSKKRELADLTHLTP 247

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 248 TQVGNWF 254


>gi|38602684|dbj|BAD02834.1| homeodomain protein Six4/5 [Halocynthia roretzi]
          Length = 432

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 105/186 (56%), Positives = 132/186 (70%), Gaps = 2/186 (1%)

Query: 206 STASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAM 265
           ST  ++   PS+    + V+C+C+ L QS + +RL R+L +LP        E V+ A+A 
Sbjct: 110 STIRLNSDAPSYSL--DNVSCICKALMQSKDPDRLERYLETLPTEALNSGKEYVVMARAC 167

Query: 266 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 325
           +A HR NFKD++ +LES  F+  NH  LQ LW  AHY EAEK+RGRPLGAV KYR+RRK 
Sbjct: 168 IASHRENFKDMFVLLESRPFTTCNHKFLQGLWYSAHYAEAEKIRGRPLGAVDKYRIRRKH 227

Query: 326 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           PLPRTIWDGEE  YCFKE+SR  L+D Y  N YP+P EKR+LA+ T L+ TQVSNWFKNR
Sbjct: 228 PLPRTIWDGEEMVYCFKERSRKALKDCYMSNRYPTPDEKRQLAKITSLSVTQVSNWFKNR 287

Query: 386 RQRDRA 391
           RQRDR+
Sbjct: 288 RQRDRS 293



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK PLPRTIWDGEE  YCFKE+SR  L+D Y  N YP+P EKR+LA+ T L+ 
Sbjct: 218 VDKYRIRRKHPLPRTIWDGEEMVYCFKERSRKALKDCYMSNRYPTPDEKRQLAKITSLSV 277

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 278 TQVSNWF 284


>gi|312088008|ref|XP_003145694.1| hypothetical protein LOAG_10119 [Loa loa]
          Length = 200

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 110/187 (58%), Positives = 144/187 (77%), Gaps = 8/187 (4%)

Query: 224 VACVCEVLQQSGNIERLGRFLWSLPACEK-------LHKNESVLKAKAMVAFHRGNFKDL 276
           +  +CE L+ +GNIERL  FLWS+   +        L  +ES+L+A+A+V FH GNF+++
Sbjct: 1   IVKICEQLEDAGNIERLAAFLWSISHQQHTDEVTTILRNHESILRARALVCFHMGNFQEM 60

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEE 336
           YRILESH+F+  +H KLQA+W +AHY EAEKLRGRPLG V KYRVR+K+P+PRTIWDGE+
Sbjct: 61  YRILESHKFTNGSHSKLQAMWQEAHYQEAEKLRGRPLGPVDKYRVRKKYPMPRTIWDGEQ 120

Query: 337 TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
            ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT  QV NWFKNRRQRDRAA  K+
Sbjct: 121 KTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTAMQVGNWFKNRRQRDRAAAAKN 180

Query: 397 GSV-HSF 402
             V H F
Sbjct: 181 KFVLHPF 187



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 58/69 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA  TGLT 
Sbjct: 100 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKKELASKTGLTA 159

Query: 186 TQVSNWFSS 194
            QV NWF +
Sbjct: 160 MQVGNWFKN 168


>gi|157279895|ref|NP_001098463.1| homeobox protein SIX6 [Bos taurus]
 gi|151557073|gb|AAI49903.1| SIX6 protein [Bos taurus]
 gi|296482994|tpg|DAA25109.1| TPA: SIX homeobox 6 [Bos taurus]
          Length = 222

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/149 (66%), Positives = 126/149 (84%), Gaps = 4/149 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+ +QVA VCE L++SG++ERLGRFLWSLP    ACE L+KNESVL+A+A+VAFH
Sbjct: 4   LPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFH 63

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPR
Sbjct: 64  GGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPR 123

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPY 358
           TIWDGE+ ++CFKE++R +LR+WY  +PY
Sbjct: 124 TIWDGEQKTHCFKERTRHLLREWYLQDPY 152



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 38/43 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY 168
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PY
Sbjct: 110 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPY 152


>gi|380692158|dbj|BAL72734.1| sine oculis homeobox homolog 3/6, partial [Eptatretus burgeri]
          Length = 168

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/159 (64%), Positives = 129/159 (81%), Gaps = 6/159 (3%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPA------CEKLHKNESVLKAKAMVA 267
           LP+  F+ EQVA VCE L++SG++ERL RFLWSLPA       E L ++ESVL+A+A+VA
Sbjct: 4   LPTLSFSPEQVAGVCETLEESGDVERLARFLWSLPAPAPGTMSEVLARHESVLRARAIVA 63

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           FH GNF DLY ILESH+F+  +H KLQ LWL+A Y EAE+LRGRPLG V KYRVR+KFPL
Sbjct: 64  FHAGNFGDLYGILESHRFAKASHGKLQVLWLEARYQEAERLRGRPLGPVDKYRVRKKFPL 123

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           PRTIWDGE+ S+CFKE++RS+LR+WY  +PYP+P +KRE
Sbjct: 124 PRTIWDGEQKSHCFKERTRSLLREWYLQDPYPNPAKKRE 162



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 46/51 (90%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 176
           + KYRVR+KFPLPRTIWDGE+ S+CFKE++RS+LR+WY  +PYP+P +KRE
Sbjct: 112 VDKYRVRKKFPLPRTIWDGEQKSHCFKERTRSLLREWYLQDPYPNPAKKRE 162


>gi|38602682|dbj|BAD02833.1| homeodomain protein Six3/6 [Halocynthia roretzi]
          Length = 384

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 136/177 (76%), Gaps = 5/177 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFH 269
            P+      Q+A VC+ L +SG++ERL RFLWSLPA     E L  NESVL+A+++VAFH
Sbjct: 39  FPAPSLNASQIATVCDALAESGDMERLARFLWSLPAIPSVMEALQTNESVLRARSLVAFH 98

Query: 270 RGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLP 328
           +GNF+++Y ILE H+F+    H +LQA+WL+AHY +AE+ RGR LG V KYR+R+KFPLP
Sbjct: 99  QGNFREVYNILEHHRFTDAAWHHRLQAMWLEAHYQDAERSRGRALGPVDKYRIRKKFPLP 158

Query: 329 RTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           R+IW+GE+ S+CFKE++R+ LR+ Y  +PYP+P +KRELA  TGL+ TQV NWFKNR
Sbjct: 159 RSIWNGEQKSHCFKERTRNSLRESYLRDPYPNPSKKRELARLTGLSPTQVGNWFKNR 215



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 56/67 (83%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLPR+IW+GE+ S+CFKE++R+ LR+ Y  +PYP+P +KRELA  TGL+ 
Sbjct: 146 VDKYRIRKKFPLPRSIWNGEQKSHCFKERTRNSLRESYLRDPYPNPSKKRELARLTGLSP 205

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 206 TQVGNWF 212


>gi|242014867|ref|XP_002428104.1| Homeobox protein SIX1, putative [Pediculus humanus corporis]
 gi|212512635|gb|EEB15366.1| Homeobox protein SIX1, putative [Pediculus humanus corporis]
          Length = 258

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 135/180 (75%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           +  F+ +Q+ C+CE LQQS + E+L +FL SLP  ++L  NE VLKA+A+VAFH+ +F +
Sbjct: 76  TLSFSPDQIECICEALQQSNDYEKLNKFLESLPTTDRLCNNEIVLKARAVVAFHKQSFPE 135

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           +Y IL+SH F+  +H +LQ +W KAHY E EK R + LGAV K+R+RRKFPLPRTIWDGE
Sbjct: 136 MYAILQSHSFNVRHHVELQKMWYKAHYKEQEKARKKELGAVDKFRLRRKFPLPRTIWDGE 195

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           ET Y FKEK+R+ L + +  N YPS  +K EL++ TGL+ TQVSNWFKN+RQRDR  + +
Sbjct: 196 ETLYWFKEKARNTLLESFKKNRYPSQEDKIELSKRTGLSKTQVSNWFKNKRQRDRGTQDR 255



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + K+R+RRKFPLPRTIWDGEET Y FKEK+R+ L + +  N YPS  +K EL++ TGL+ 
Sbjct: 176 VDKFRLRRKFPLPRTIWDGEETLYWFKEKARNTLLESFKKNRYPSQEDKIELSKRTGLSK 235

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 236 TQVSNWF 242


>gi|395731873|ref|XP_003780408.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX3, partial
           [Pongo abelii]
          Length = 212

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 124/148 (83%), Gaps = 4/148 (2%)

Query: 241 GRFLWSLP----ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQAL 296
           GRFLW +     A E ++K+ES+L+A+A V FH GNF+DLY ILE+H+F+  +H KLQA+
Sbjct: 1   GRFLWLVALGPRAXEAINKHESILRARAXVTFHTGNFRDLYHILENHKFTKESHGKLQAM 60

Query: 297 WLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN 356
           WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +
Sbjct: 61  WLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQD 120

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKN 384
           PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 121 PYPNPSKKRELAQATGLTPTQVGNWFKN 148



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 80  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 139

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 140 TQVGNWF 146


>gi|326921182|ref|XP_003206841.1| PREDICTED: homeobox protein SIX6-like [Meleagris gallopavo]
          Length = 201

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 101/153 (66%), Positives = 128/153 (83%), Gaps = 2/153 (1%)

Query: 232 QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHP 291
           ++ G + R GR   S P CE L+KNESVL+A+A+VAFH GN+++LY ILE+H+F+  +H 
Sbjct: 38  KEGGIVPRRGRRA-SFP-CEALNKNESVLRARAIVAFHTGNYRELYHILENHKFTKESHG 95

Query: 292 KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRD 351
           KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+
Sbjct: 96  KLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLRE 155

Query: 352 WYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           WY  +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 156 WYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 188



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 120 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 179

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 180 TQVGNWFKN 188


>gi|449277089|gb|EMC85385.1| Homeobox protein SIX3, partial [Columba livia]
          Length = 200

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 95/136 (69%), Positives = 121/136 (88%)

Query: 249 ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
           ACE ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKL
Sbjct: 52  ACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKL 111

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA
Sbjct: 112 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELA 171

Query: 369 EATGLTTTQVSNWFKN 384
           +ATGLT TQV NWFKN
Sbjct: 172 QATGLTPTQVGNWFKN 187



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 119 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 178

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 179 TQVGNWFKN 187


>gi|392343945|ref|XP_003748828.1| PREDICTED: homeobox protein SIX5 [Rattus norvegicus]
          Length = 719

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 127/172 (73%), Gaps = 1/172 (0%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL +LP  E+L  ++ VL+A+A+VAF RG + +LY+
Sbjct: 78  FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYQ 137

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
           +LES  F   +H  LQ L+L+A Y EAE+ R    G   KYR+R+KFPLP+TIWDGEET 
Sbjct: 138 LLESRPFPAAHHAFLQDLYLRARYHEAERARAG-AGRGDKYRLRKKFPLPKTIWDGEETV 196

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 197 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 248



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 53/65 (81%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQ
Sbjct: 176 KYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQ 235

Query: 188 VSNWF 192
           VSNWF
Sbjct: 236 VSNWF 240


>gi|281352626|gb|EFB28210.1| hypothetical protein PANDA_000200 [Ailuropoda melanoleuca]
          Length = 449

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 96/150 (64%), Positives = 124/150 (82%), Gaps = 9/150 (6%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRP 312
           ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKLRGRP
Sbjct: 99  INKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRP 158

Query: 313 LGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATG 372
           LG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATG
Sbjct: 159 LGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATG 218

Query: 373 LTTTQVSNWFKN---------RRQRDRAAE 393
           LT TQV NWFKN          + RDR +E
Sbjct: 219 LTPTQVGNWFKNRRQRDRAAAAKNRDRESE 248



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 162 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 221

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 222 TQVGNWF 228


>gi|313237292|emb|CBY12487.1| unnamed protein product [Oikopleura dioica]
 gi|313243168|emb|CBY39837.1| unnamed protein product [Oikopleura dioica]
          Length = 252

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 133/180 (73%), Gaps = 4/180 (2%)

Query: 210 ISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAM 265
            +P+     F  + V  +C  L+  G+I+RLG++LWSLPA     E L KNE +++A+A+
Sbjct: 61  FTPLPAQQSFAVQHVINICSTLEDCGDIDRLGQYLWSLPALPAILEALSKNEFLIRARAV 120

Query: 266 VAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKF 325
           VAF +GN+++LY ++ES +FS  +H KLQALWL+AHY EAE  RGRPLG V KYRVR+K 
Sbjct: 121 VAFKQGNYRELYALIESRRFSNIHHAKLQALWLEAHYGEAEAARGRPLGPVDKYRVRKKH 180

Query: 326 PLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           P P TIWDGE+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAEAT LT TQV NWFKNR
Sbjct: 181 PFPSTIWDGEQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAEATALTPTQVGNWFKNR 240



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K P P TIWDGE+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAEAT LT 
Sbjct: 171 VDKYRVRKKHPFPSTIWDGEQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAEATALTP 230

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 231 TQVGNWFKN 239


>gi|56694864|gb|AAW23094.1| Six36a [Oikopleura dioica]
          Length = 223

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/171 (58%), Positives = 130/171 (76%), Gaps = 4/171 (2%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGNFK 274
           F  + V  +C  L+  G+I+RLG++LWSLPA     E L KNE +++A+A+VAF +GN++
Sbjct: 2   FAVQHVINICSTLEDCGDIDRLGQYLWSLPALPAILEALSKNEFLIRARAVVAFKQGNYR 61

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +LY ++ES +FS  +H KLQALWL+AHY EAE  RGRPLG V KYRVR+K P P TIWDG
Sbjct: 62  ELYALIESRRFSNIHHAKLQALWLEAHYGEAEAARGRPLGPVDKYRVRKKHPFPSTIWDG 121

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           E+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAEAT LT TQV NWFKNR
Sbjct: 122 EQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAEATALTPTQVGNWFKNR 172



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K P P TIWDGE+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAEAT LT 
Sbjct: 103 VDKYRVRKKHPFPSTIWDGEQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAEATALTP 162

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 163 TQVGNWF 169


>gi|268566873|ref|XP_002647658.1| C. briggsae CBR-CEH-34 protein [Caenorhabditis briggsae]
          Length = 256

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 8/199 (4%)

Query: 218 GFTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
            ++++++ C+CE L     Q+G  E+L  F+++LP C      ES LKA+A+V +   N+
Sbjct: 15  SYSEQEIVCICESLFNEGLQTGRTEQLATFIYNLPQC--YQSMESALKAQALVYYSTQNW 72

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K LYR+LE H+FSPHNH  LQ LWL AHY EAEK + R LGAV KYR+R+K P P +IWD
Sbjct: 73  KSLYRLLECHKFSPHNHTVLQNLWLNAHYKEAEKTKERELGAVCKYRIRKKNPFPTSIWD 132

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEET+YCFK KSR+VLRD Y  N YPS  EK+ LA  T L+  QVSNWFKN+RQR+RAA 
Sbjct: 133 GEETNYCFKSKSRNVLRDAYKKNNYPSVDEKKRLANQTDLSVIQVSNWFKNKRQRERAAG 192

Query: 394 QKDGSVHSFRVNIGGDSKT 412
           Q D S  S R N   D  +
Sbjct: 193 QLDRS--SARSNDSDDGSS 209



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 50/67 (74%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K P P +IWDGEET+YCFK KSR+VLRD Y  N YPS  EK+ LA  T L+ 
Sbjct: 115 VCKYRIRKKNPFPTSIWDGEETNYCFKSKSRNVLRDAYKKNNYPSVDEKKRLANQTDLSV 174

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 175 IQVSNWF 181


>gi|363583674|gb|AEW27304.1| SIX homeobox 6 [Columba livia]
          Length = 194

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/130 (70%), Positives = 115/130 (88%)

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
           KNESVL+A+A+VAFH GN+++LY ILE+H+F+  +H KLQALWL+AHY EAEKLRGRPLG
Sbjct: 1   KNESVLRARAIVAFHTGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 60

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLT 374
            V KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT
Sbjct: 61  PVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLT 120

Query: 375 TTQVSNWFKN 384
            TQV NWFKN
Sbjct: 121 PTQVGNWFKN 130



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 62  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTP 121

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 122 TQVGNWF 128


>gi|71068444|gb|AAZ23144.1| Six3/6b [Oikopleura dioica]
 gi|71068446|gb|AAZ23145.1| Six3/6b [Oikopleura dioica]
          Length = 291

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/179 (55%), Positives = 132/179 (73%), Gaps = 4/179 (2%)

Query: 211 SPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMV 266
           +P      F  + V  +C  L+  G+I+RLG++LWSLPA     E L KNE +++A+A+V
Sbjct: 63  TPFPAQQNFAVQHVINICSTLEDCGDIDRLGQYLWSLPALPAILEALSKNEFLIRARAVV 122

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AF +G++++LY ++ES +FS  +H KLQALWL+AHY EAE  RGRPLG V KYRVR+K P
Sbjct: 123 AFKQGSYRELYALIESRRFSNLHHAKLQALWLEAHYGEAEAARGRPLGPVDKYRVRKKHP 182

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
            P TIWDGE+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAE+T LT TQV NWFKNR
Sbjct: 183 FPSTIWDGEQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAESTALTPTQVGNWFKNR 241



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 54/69 (78%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K P P TIWDGE+ S+CFKE++R+ LR+ Y  +PYP+P  KRELAE+T LT 
Sbjct: 172 VDKYRVRKKHPFPSTIWDGEQKSHCFKERTRNTLRESYLKDPYPNPSRKRELAESTALTP 231

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 232 TQVGNWFKN 240


>gi|17559040|ref|NP_505958.1| Protein CEH-32 [Caenorhabditis elegans]
 gi|21264446|sp|Q23175.2|HM32_CAEEL RecName: Full=Homeobox protein ceh-32
 gi|12240232|gb|AAG49583.1| CEH-32 [Caenorhabditis elegans]
 gi|15718260|emb|CAB01249.2| Protein CEH-32 [Caenorhabditis elegans]
          Length = 439

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 19/219 (8%)

Query: 186 TQVSNWFSSANITS----SPNTSTSTASISPILPSF-------------GFTQEQVACVC 228
           +Q+   F   N+        N ++ST S+ P +PS                T +Q+   C
Sbjct: 18  SQLGQMFQPGNVAMLQALQANGASSTPSLFPAMPSVIPSLAAPSSPTTSNLTADQIVKTC 77

Query: 229 EVLQQSGNIERLGRFLWSLPA--CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFS 286
           E L+  G+++ L RF+ ++P    +++  NE+ L+A+A+V FH  +F++LY ILE+++FS
Sbjct: 78  EQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRELYAILENNKFS 137

Query: 287 PHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR 346
           P  HPKLQ +W +AHY E EK RG+ L AV KYRVR+K+P+PRTIWDGE+ ++CFKE++R
Sbjct: 138 PKYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKYPMPRTIWDGEQKTHCFKERTR 197

Query: 347 SVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           S+LR+WY  +PYP+P +K+ELA ATGLT  QV NWFKNR
Sbjct: 198 SLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNR 236



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+P+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 167 VDKYRVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQ 226

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 227 MQVGNWF 233


>gi|196015040|ref|XP_002117378.1| hypothetical protein TRIADDRAFT_5673 [Trichoplax adhaerens]
 gi|190580131|gb|EDV20217.1| hypothetical protein TRIADDRAFT_5673 [Trichoplax adhaerens]
          Length = 180

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/178 (54%), Positives = 131/178 (73%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           LP   F+ +Q A VC +L Q  +I+RL  FLWSLP  ++L  N+++L A+A VA+H+ NF
Sbjct: 3   LPIGNFSTDQFASVCNILLQRNHIDRLATFLWSLPPNDELKVNQNILLARATVAYHQHNF 62

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           ++LY++LE++ FS   HPKLQ LW +AHY+E ++ RG+ L AV KYRVR+K+PLP TI D
Sbjct: 63  EELYQLLENYPFSSEFHPKLQELWKEAHYLEEKQSRGKELDAVTKYRVRKKYPLPLTISD 122

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           GE+ +Y FKE SR +L ++Y  NPYP+  EK  +AEA  LT  QVSNWFKN+RQRDRA
Sbjct: 123 GEKITYSFKESSRKMLVEYYQRNPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA 180



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+K+PLP TI DGE+ +Y FKE SR +L ++Y  NPYP+  EK  +AEA  LT 
Sbjct: 105 VTKYRVRKKYPLPLTISDGEKITYSFKESSRKMLVEYYQRNPYPTSEEKAIIAEAASLTK 164

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 165 VQVSNWF 171


>gi|17559044|ref|NP_504419.1| Protein CEH-34 [Caenorhabditis elegans]
 gi|8488986|sp|Q94165.2|HM34_CAEEL RecName: Full=Homeobox protein ceh-34
 gi|351050078|emb|CCD64164.1| Protein CEH-34 [Caenorhabditis elegans]
          Length = 256

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 106/199 (53%), Positives = 137/199 (68%), Gaps = 8/199 (4%)

Query: 218 GFTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
            ++++++ C+CE L     Q+G  E+L  F+++LP C ++   ESVLKA+A+V F   N+
Sbjct: 16  SYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLPQCYQVM--ESVLKAQALVYFTTQNW 73

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWD 333
           K LY++LE  +FSPHNH  LQ LWL AHY EA K + R LGAV KYR+R+K P P TIWD
Sbjct: 74  KMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELGAVCKYRIRKKNPFPNTIWD 133

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEET+YCFK KSR+VLRD Y    YPS  +KR LA+ T L+  QVSNWFKN+RQR+RAA 
Sbjct: 134 GEETNYCFKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAG 193

Query: 394 QKDGSVHSFRVNIGGDSKT 412
           Q D S  S R N   D  +
Sbjct: 194 QLDRS--SARSNDSDDGSS 210



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 50/67 (74%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K P P TIWDGEET+YCFK KSR+VLRD Y    YPS  +KR LA+ T L+ 
Sbjct: 116 VCKYRIRKKNPFPNTIWDGEETNYCFKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSI 175

Query: 186 TQVSNWF 192
            QVSNWF
Sbjct: 176 IQVSNWF 182


>gi|268557198|ref|XP_002636588.1| C. briggsae CBR-CEH-32 protein [Caenorhabditis briggsae]
          Length = 438

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 18/218 (8%)

Query: 186 TQVSNWFSSANITS----SPNTSTSTASI---SPILPSFG---------FTQEQVACVCE 229
           +Q+   F   N+        N ST+T S+    P++PS            T +Q+   C+
Sbjct: 18  SQLGQMFQPGNLAMLQALQANGSTATPSLFPTMPVIPSLAAPSSPTTSNLTVDQIVKTCK 77

Query: 230 VLQQSGNIERLGRFLWSLP--ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
            L+  G+++ L RF+ ++P    +++  NE+ L+A+A+V FH G+F++LY ILE+++FS 
Sbjct: 78  KLESEGDVDGLFRFMCTIPPQTVQEVSANETYLRARALVCFHAGHFRELYSILENNKFSH 137

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
             HPKLQ +W +AHY E EK RG+ L AV KYRVR+KFP+PRTIWDGE+ ++CFKE++RS
Sbjct: 138 EYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKFPMPRTIWDGEQKTHCFKERTRS 197

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           +LR+WY  +PYP+P +K+ELA ATGLT  QV NWFKNR
Sbjct: 198 LLREWYLKDPYPNPPKKKELASATGLTQMQVGNWFKNR 235



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 166 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELASATGLTQ 225

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 226 MQVGNWF 232


>gi|341904378|gb|EGT60211.1| CBN-CEH-32 protein [Caenorhabditis brenneri]
          Length = 448

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 143/218 (65%), Gaps = 19/218 (8%)

Query: 187 QVSNWFSSANITS----SPNTSTSTASISPILPSF-------------GFTQEQVACVCE 229
           Q+   F   N+        N +  T S+ P +PS                T +Q+   CE
Sbjct: 19  QLGQMFQPGNMAMLQALQANGAGPTPSLFPTMPSVLPTLAAPSSPTTSNLTADQIIKTCE 78

Query: 230 VLQQSGNIERLGRFLWSLPA--CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
            L+  G+I+ L + + S+ A   +++  NE+ L+A+A+V+FH G F+DLY ILE+++FSP
Sbjct: 79  QLEADGDIDGLFKVICSISAQKTQEIATNEAYLRARALVSFHAGQFRDLYAILENNKFSP 138

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
             HPKLQ +W +AHY E EK RG+ L AV KYRVR+KFP+PRTIWDGE+ ++CFKE++RS
Sbjct: 139 KFHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKFPMPRTIWDGEQKTHCFKERTRS 198

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           +LR+WY  +PYP+P +K+ELA ATGLT  QV NWFKNR
Sbjct: 199 LLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNR 236



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 167 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQ 226

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 227 MQVGNWF 233


>gi|341904434|gb|EGT60267.1| hypothetical protein CAEBREN_28477 [Caenorhabditis brenneri]
          Length = 448

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 143/218 (65%), Gaps = 19/218 (8%)

Query: 187 QVSNWFSSANITS----SPNTSTSTASISPILPSF-------------GFTQEQVACVCE 229
           Q+   F   N+        N +  T S+ P +PS                T +Q+   CE
Sbjct: 19  QLGQMFQPGNMAMLQALQANGAGPTPSLFPTMPSVLPTLAAPSSPTTSNLTADQIIKTCE 78

Query: 230 VLQQSGNIERLGRFLWSLPA--CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
            L+  G+I+ L + + S+ A   +++  NE+ L+A+A+V+FH G F+DLY ILE+++FSP
Sbjct: 79  QLEADGDIDGLFKVICSISAQKTQEIATNEAYLRARALVSFHAGQFRDLYAILENNKFSP 138

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
             HPKLQ +W +AHY E EK RG+ L AV KYRVR+KFP+PRTIWDGE+ ++CFKE++RS
Sbjct: 139 KFHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKFPMPRTIWDGEQKTHCFKERTRS 198

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           +LR+WY  +PYP+P +K+ELA ATGLT  QV NWFKNR
Sbjct: 199 LLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNR 236



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP+PRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +K+ELA ATGLT 
Sbjct: 167 VDKYRVRKKFPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQ 226

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 227 MQVGNWF 233


>gi|348020113|gb|AEP43998.1| sine oculis-like transcription factor Six1/2B [Craspedacusta
           sowerbyi]
          Length = 238

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/217 (50%), Positives = 139/217 (64%), Gaps = 12/217 (5%)

Query: 179 EATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIE 238
           EATG T+ +  N  S A        ST      P+     F++  +  V E L  SG  E
Sbjct: 31  EATGETSIESGNKKSWA-------CSTHIDRQMPV-----FSEHHIELVSECLISSGQPE 78

Query: 239 RLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWL 298
           RL RFLW++   + +  +E+ L A+A V F + +F  LYR+L+   FS  NH +LQ+LW 
Sbjct: 79  RLRRFLWAVSKDQPVGDSEAALVARAYVYFWQKDFDSLYRVLQMRNFSKKNHERLQSLWR 138

Query: 299 KAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY 358
            AHY+EAE  RGRPLGAVGKYR+RRKFPLPRTIWDGE+ SYCF+E +R  L + Y  NPY
Sbjct: 139 IAHYLEAEAQRGRPLGAVGKYRIRRKFPLPRTIWDGEQNSYCFREHARRALHEAYKKNPY 198

Query: 359 PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           P+ +EK  LA  T L+ TQVSNWFKNRRQR RA+E +
Sbjct: 199 PTAKEKANLAAETSLSVTQVSNWFKNRRQRVRASESR 235



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRKFPLPRTIWDGE+ SYCF+E +R  L + Y  NPYP+ +EK  LA  T L+ 
Sbjct: 156 VGKYRIRRKFPLPRTIWDGEQNSYCFREHARRALHEAYKKNPYPTAKEKANLAAETSLSV 215

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 216 TQVSNWF 222


>gi|426389267|ref|XP_004061045.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX5 [Gorilla
           gorilla gorilla]
          Length = 738

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 98/172 (56%), Positives = 118/172 (68%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ EQVACVCE L Q+G+  RL RFL ++P  E+L  ++ V      V    G    LYR
Sbjct: 85  FSPEQVACVCEALLQAGHAGRLSRFLGAVPPAERLRGSDPVXXXXXXVCLPAGEASRLYR 144

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 338
             E   F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct: 145 RAEIRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 204

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 205 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDR 256



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 182 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 241

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 242 TQVSNWF 248


>gi|170048190|ref|XP_001851577.1| six/sine homebox transcription factors [Culex quinquefasciatus]
 gi|167870337|gb|EDS33720.1| six/sine homebox transcription factors [Culex quinquefasciatus]
          Length = 145

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/98 (96%), Positives = 96/98 (97%)

Query: 299 KAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY 358
           + HYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY
Sbjct: 19  RTHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPY 78

Query: 359 PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE KD
Sbjct: 79  PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEHKD 116



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT
Sbjct: 36  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 95

Query: 186 TQVSNWFSS 194
           TQVSNWF +
Sbjct: 96  TQVSNWFKN 104


>gi|341886601|gb|EGT42536.1| CBN-CEH-33 protein [Caenorhabditis brenneri]
          Length = 231

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/199 (54%), Positives = 126/199 (63%), Gaps = 39/199 (19%)

Query: 201 PNTSTSTASISPIL-PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESV 259
           PN+S+S   +      +  ++ EQVAC+CE L                            
Sbjct: 3   PNSSSSFLHLHHFTCDTTRYSDEQVACICEALTND------------------------- 37

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKY 319
             AK +         +LYRI+E+HQFS  +H  LQ  WL AHY EAEK+RGR LGAVGKY
Sbjct: 38  --AKKL---------ELYRIIETHQFSSEHHLSLQEWWLNAHYHEAEKIRGRQLGAVGKY 86

Query: 320 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVS 379
           R+RRK+PLPRTIWDGEETSYCF++KSR +LRDWY  N YPSPREKRELAE T LT TQVS
Sbjct: 87  RIRRKYPLPRTIWDGEETSYCFRDKSRILLRDWYCRNSYPSPREKRELAEKTHLTVTQVS 146

Query: 380 NWFKNRRQRDRAA--EQKD 396
           NWFKNRRQRDRA   E KD
Sbjct: 147 NWFKNRRQRDRAGVHEGKD 165



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RRK+PLPRTIWDGEETSYCF++KSR +LRDWY  N YPSPREKRELAE T LT 
Sbjct: 83  VGKYRIRRKYPLPRTIWDGEETSYCFRDKSRILLRDWYCRNSYPSPREKRELAEKTHLTV 142

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 143 TQVSNWF 149


>gi|47198090|emb|CAF88562.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 286

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 121/157 (77%), Gaps = 4/157 (2%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP   F+  QVA VC  L+++G++ERL RFLW+LP    A + + + E V +A+A+VA+H
Sbjct: 45  LPGLCFSAAQVASVCATLEETGDVERLARFLWALPGSGDARDSISEQEPVQRARALVAYH 104

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPR 329
            G F +LYRILE+H+F+  +H KLQA+WL+AHY EAE LRGRPLG V KYRVR+KFPLP+
Sbjct: 105 AGRFGELYRILETHRFTRASHGKLQAMWLEAHYREAEALRGRPLGPVDKYRVRKKFPLPK 164

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
           TIWDGE  ++CFKE++R  +R+WY  +PYP+P +KRE
Sbjct: 165 TIWDGEHKTHCFKERTRGAVREWYLQDPYPNPAKKRE 201



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 43/51 (84%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 176
           + KYRVR+KFPLP+TIWDGE  ++CFKE++R  +R+WY  +PYP+P +KRE
Sbjct: 151 VDKYRVRKKFPLPKTIWDGEHKTHCFKERTRGAVREWYLQDPYPNPAKKRE 201


>gi|308503707|ref|XP_003114037.1| CRE-CEH-32 protein [Caenorhabditis remanei]
 gi|308261422|gb|EFP05375.1| CRE-CEH-32 protein [Caenorhabditis remanei]
          Length = 440

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/218 (43%), Positives = 140/218 (64%), Gaps = 18/218 (8%)

Query: 186 TQVSNWFSSANITS----SPNTSTSTASISPILPSF------------GFTQEQVACVCE 229
           +Q+   F   N+        N +  T S+ P +P                T +Q+   CE
Sbjct: 18  SQLGQMFQPGNMAMLQALQANGAAPTPSLFPTMPVMSPLAAPSSPTTSNLTADQIVKTCE 77

Query: 230 VLQQSGNIERLGRFLWSLPA--CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSP 287
            L+  G+++ L RF+ ++P    +++   ES L+A+A+V FH G+F++LY ILE++ FS 
Sbjct: 78  QLETDGDVDGLFRFICTIPPQKAQEVAAQESFLRARALVCFHAGHFRELYSILENNAFSK 137

Query: 288 HNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 347
            +HPKLQ +W +AHY + EK R + L AV KYR+R+KFP+P TIWDGE+ ++CFKE++RS
Sbjct: 138 KHHPKLQEMWHEAHYRDQEKSRQKSLCAVDKYRIRKKFPMPLTIWDGEQKTHCFKERTRS 197

Query: 348 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
            LR+WY  +PYP+P +K+ELA+ATGLT  QV NWFKNR
Sbjct: 198 TLREWYLKDPYPNPPKKKELAQATGLTQMQVGNWFKNR 235



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFP+P TIWDGE+ ++CFKE++RS LR+WY  +PYP+P +K+ELA+ATGLT 
Sbjct: 166 VDKYRIRKKFPMPLTIWDGEQKTHCFKERTRSTLREWYLKDPYPNPPKKKELAQATGLTQ 225

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 226 MQVGNWF 232


>gi|195581194|ref|XP_002080419.1| GD10477 [Drosophila simulans]
 gi|194192428|gb|EDX06004.1| GD10477 [Drosophila simulans]
          Length = 129

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 95/97 (97%)

Query: 300 AHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYP 359
           AHYVEAEKLRGRPLGAVGKY VRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYP
Sbjct: 33  AHYVEAEKLRGRPLGAVGKYSVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYP 92

Query: 360 SPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           SPREKR+LAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 93  SPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKE 129



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 65/67 (97%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KY VRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY+HNPYPSPREKR+LAEATGLTT
Sbjct: 49  VGKYSVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTT 108

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 109 TQVSNWF 115


>gi|156361871|ref|XP_001625507.1| predicted protein [Nematostella vectensis]
 gi|156212344|gb|EDO33407.1| predicted protein [Nematostella vectensis]
          Length = 165

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 124/165 (75%)

Query: 222 EQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILE 281
           +QVAC+C+ L Q G+I+RL +FL S+P  +  +K+ES+LKA+AMVAFHRG ++++Y ILE
Sbjct: 1   DQVACICDALFQEGDIKRLSQFLLSIPQEDLQNKSESLLKARAMVAFHRGCYQEVYNILE 60

Query: 282 SHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF 341
           +++F   +H  LQ LW KAHY E EKLRGR L AV K+R+R+K PLP TI DGE+T Y F
Sbjct: 61  NNKFDTSSHEFLQCLWYKAHYSEGEKLRGRSLSAVDKFRIRKKSPLPNTISDGEKTIYFF 120

Query: 342 KEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           KEK R+VL++ Y H  YP+ +EKR +A  T LT  QV NWF+NRR
Sbjct: 121 KEKVRTVLKECYEHKKYPTLKEKRVIATQTNLTLRQVRNWFRNRR 165



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 48/67 (71%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + K+R+R+K PLP TI DGE+T Y FKEK R+VL++ Y H  YP+ +EKR +A  T LT 
Sbjct: 95  VDKFRIRKKSPLPNTISDGEKTIYFFKEKVRTVLKECYEHKKYPTLKEKRVIATQTNLTL 154

Query: 186 TQVSNWF 192
            QV NWF
Sbjct: 155 RQVRNWF 161


>gi|402230884|emb|CCG27800.1| sine oculis homeobox homolog 1/2 protein, partial [Botryllus
           schlosseri]
          Length = 103

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 97/103 (94%)

Query: 230 VLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHN 289
           VLQQ GNIERL RFLWSLPACE LHKNESVLKAKA+VAFHRGNF++LY++LESH FS HN
Sbjct: 1   VLQQGGNIERLARFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKLLESHTFSQHN 60

Query: 290 HPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           HPKLQ LWLKAHY+EAEKLRGRPLGAVGKYRVRRKFPLPRTIW
Sbjct: 61  HPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 103


>gi|260788250|ref|XP_002589163.1| SIX class homeodomain transcription factor [Branchiostoma floridae]
 gi|229274338|gb|EEN45174.1| SIX class homeodomain transcription factor [Branchiostoma floridae]
          Length = 200

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/94 (93%), Positives = 91/94 (96%)

Query: 303 VEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPR 362
           +EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPR
Sbjct: 1   MEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPR 60

Query: 363 EKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           EKRELAEATGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 61  EKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE 94



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVRRKFPLPRTIWDGEETSYCFKEKSR VLR+WY HNPYPSPREKRELAEATGLTT
Sbjct: 14  VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTT 73

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 74  TQVSNWF 80


>gi|383210365|dbj|BAM08279.1| sine oculis, partial [Gryllus bimaculatus]
          Length = 94

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/94 (93%), Positives = 91/94 (96%)

Query: 227 VCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFS 286
           VCEV QQSGNIERLGRFLWSLPAC+KLHKNESVLKAKA+VAFHRGNFK+LYRILES  FS
Sbjct: 1   VCEVFQQSGNIERLGRFLWSLPACDKLHKNESVLKAKAIVAFHRGNFKELYRILESQTFS 60

Query: 287 PHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR 320
           PHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR
Sbjct: 61  PHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR 94


>gi|256072207|ref|XP_002572428.1| homeobox protein six-related [Schistosoma mansoni]
 gi|350645312|emb|CCD60027.1| homeobox protein six-related [Schistosoma mansoni]
          Length = 271

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 117/176 (66%)

Query: 216 SFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKD 275
           S  F+  Q+ C+C+VL     I+RL  FL  +      H NE ++K +A+V F    F +
Sbjct: 2   SMDFSLNQIECICQVLYNDQEIDRLKTFLSKISTTTMYHNNEVIVKCRALVLFVNKEFTE 61

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           L++IL +  FS +NH ++Q LW +A Y + E  RG  L AV KYRVR+KFP P+TIWDG+
Sbjct: 62  LFKILNNFPFSVYNHNEMQNLWYQAKYAQIEISRGHQLNAVAKYRVRKKFPPPKTIWDGD 121

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           + +Y FK+KSR+ L + + HN YPS  EK+ +A+ +GLT TQVSNWFKNRRQRD+ 
Sbjct: 122 QVTYYFKDKSRNYLAEQFVHNSYPSIVEKKFMAKKSGLTITQVSNWFKNRRQRDKT 177



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 53/67 (79%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFP P+TIWDG++ +Y FK+KSR+ L + + HN YPS  EK+ +A+ +GLT 
Sbjct: 102 VAKYRVRKKFPPPKTIWDGDQVTYYFKDKSRNYLAEQFVHNSYPSIVEKKFMAKKSGLTI 161

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 162 TQVSNWF 168


>gi|109288055|gb|ABG29071.1| transcription factor Six3, partial [Pleurodeles waltl]
          Length = 118

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/118 (70%), Positives = 101/118 (85%)

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           FH GNF++LY++LE H+F   +H KLQALWL+AHY EAEKLRGRPLG V KYRVR+KFPL
Sbjct: 1   FHSGNFRELYQLLEQHKFGRDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPL 60

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNR 385
           PRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNR
Sbjct: 61  PRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELALATGLTPTQVGNWFKNR 118



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 49  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELALATGLTP 108

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 109 TQVGNWFKN 117


>gi|402230892|emb|CCG27804.1| sine oculis homeobox homolog 3/6 protein, partial [Botryllus
           schlosseri]
          Length = 271

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/151 (54%), Positives = 119/151 (78%), Gaps = 3/151 (1%)

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEKLRGRPLGAVGK 318
           L+A+A+VA+H GN++++Y IL+ H F   + H  LQ++W++AHY++AE+ +GRPLG V K
Sbjct: 1   LRARAIVAYHHGNYREVYNILQHHSFRDTSWHHTLQSIWMEAHYLDAERSKGRPLGPVEK 60

Query: 319 YRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           YR+R++FPLPR+IW+GE+ ++CFKEK+R+ LR+ Y  +PYP+P +KRELA+ TGL+ TQV
Sbjct: 61  YRIRKRFPLPRSIWNGEQKNHCFKEKTRTCLRNSYLSDPYPNPSKKRELAKLTGLSPTQV 120

Query: 379 SNWFKNRRQRDRAAEQKDGSVHSFRVNIGGD 409
            NWFKNRRQRDRAA  K+    + +   GGD
Sbjct: 121 GNWFKNRRQRDRAAVAKNRM--ALQQQNGGD 149



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 57/67 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R++FPLPR+IW+GE+ ++CFKEK+R+ LR+ Y  +PYP+P +KRELA+ TGL+ 
Sbjct: 58  VEKYRIRKRFPLPRSIWNGEQKNHCFKEKTRTCLRNSYLSDPYPNPSKKRELAKLTGLSP 117

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 118 TQVGNWF 124


>gi|351697920|gb|EHB00839.1| Homeobox protein SIX5, partial [Heterocephalus glaber]
          Length = 606

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 96/124 (77%)

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 326
           AF RG + +LYR+LES  F   +H  LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFP
Sbjct: 1   AFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFP 60

Query: 327 LPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           LP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ TQVSNWFKNRR
Sbjct: 61  LPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRR 120

Query: 387 QRDR 390
           QRDR
Sbjct: 121 QRDR 124



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 50  VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 109

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 110 TQVSNWF 116


>gi|402240971|gb|AFQ40266.1| optix, partial [Heliconius heurippa]
          Length = 133

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 93/107 (86%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSV 399
           Y  +PYP+P +KRELA ATGLT TQV NWFKNRRQRDRAA  K+ S 
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKNRRQRDRAAASKNRSA 107



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 84  TQVGNWF 90


>gi|431909177|gb|ELK12767.1| Homeobox protein SIX5 [Pteropus alecto]
          Length = 693

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 4/137 (2%)

Query: 254 HKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPL 313
           +  + VL+A+A+VAF RG + +LYR+LES  F   +   +Q L+L+A Y + E    RP 
Sbjct: 77  YPTDPVLRARALVAFQRGEYAELYRLLESRPFPAAHRVFVQDLYLRARYHDGE----RPA 132

Query: 314 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGL 373
             V KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL
Sbjct: 133 APVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL 192

Query: 374 TTTQVSNWFKNRRQRDR 390
           + TQVSNWFKNRRQRDR
Sbjct: 193 SLTQVSNWFKNRRQRDR 209



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 135 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 194

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 195 TQVSNWF 201


>gi|357966329|gb|AET97309.1| optix [Heliconius erato etylus]
 gi|357966331|gb|AET97310.1| optix [Heliconius erato etylus]
 gi|357966333|gb|AET97311.1| optix [Heliconius erato etylus]
 gi|357966335|gb|AET97312.1| optix [Heliconius erato etylus]
 gi|357966337|gb|AET97313.1| optix [Heliconius erato lativitta]
 gi|357966339|gb|AET97314.1| optix [Heliconius clysonymus]
 gi|357966341|gb|AET97315.1| optix [Heliconius telesiphe]
 gi|357966343|gb|AET97316.1| optix [Heliconius erato chestertonii]
 gi|357966345|gb|AET97317.1| optix [Heliconius erato chestertonii]
 gi|357966347|gb|AET97318.1| optix [Heliconius erato chestertonii]
 gi|357966349|gb|AET97319.1| optix [Heliconius erato chestertonii]
 gi|357966351|gb|AET97320.1| optix [Heliconius erato hydara]
 gi|357966353|gb|AET97321.1| optix [Heliconius erato hydara]
 gi|357966355|gb|AET97322.1| optix [Heliconius erato erato]
 gi|357966357|gb|AET97323.1| optix [Heliconius erato erato]
 gi|357966359|gb|AET97324.1| optix [Heliconius erato hydara]
 gi|357966361|gb|AET97325.1| optix [Heliconius erato hydara]
 gi|357966363|gb|AET97326.1| optix [Heliconius erato hydara]
 gi|357966365|gb|AET97327.1| optix [Heliconius erato hydara]
 gi|357966367|gb|AET97328.1| optix [Heliconius erato hydara]
 gi|357966369|gb|AET97329.1| optix [Heliconius erato chestertonii]
 gi|357966371|gb|AET97330.1| optix [Heliconius erato hydara]
 gi|357966373|gb|AET97331.1| optix [Heliconius erato hydara]
 gi|357966375|gb|AET97332.1| optix [Heliconius erato hydara]
 gi|357966377|gb|AET97333.1| optix [Heliconius erato erato]
 gi|357966379|gb|AET97334.1| optix [Heliconius erato erato]
 gi|357966381|gb|AET97335.1| optix [Heliconius erato erato]
 gi|357966383|gb|AET97336.1| optix [Heliconius erato dignus]
 gi|357966385|gb|AET97337.1| optix [Heliconius erato venus]
 gi|357966387|gb|AET97338.1| optix [Heliconius erato venus]
 gi|357966389|gb|AET97339.1| optix [Heliconius erato dignus]
 gi|357966391|gb|AET97340.1| optix [Heliconius erato dignus]
 gi|357966393|gb|AET97341.1| optix [Heliconius erato dignus]
 gi|357966395|gb|AET97342.1| optix [Heliconius erato phyllis]
 gi|357966397|gb|AET97343.1| optix [Heliconius erato phyllis]
 gi|357966399|gb|AET97344.1| optix [Heliconius erato phyllis]
 gi|357966401|gb|AET97345.1| optix [Heliconius erato phyllis]
 gi|357966403|gb|AET97346.1| optix [Heliconius erato phyllis]
 gi|357966405|gb|AET97347.1| optix [Heliconius erato hydara]
 gi|357966407|gb|AET97348.1| optix [Heliconius erato petiverana]
 gi|357966409|gb|AET97349.1| optix [Heliconius erato petiverana]
 gi|357966411|gb|AET97350.1| optix [Heliconius erato petiverana]
 gi|357966413|gb|AET97351.1| optix [Heliconius erato petiverana]
 gi|357966415|gb|AET97352.1| optix [Heliconius erato petiverana]
 gi|357966417|gb|AET97353.1| optix [Heliconius erato petiverana]
 gi|357966419|gb|AET97354.1| optix [Heliconius erato favorinus]
 gi|357966421|gb|AET97355.1| optix [Heliconius erato favorinus]
 gi|357966427|gb|AET97358.1| optix [Heliconius erato emma]
 gi|357966429|gb|AET97359.1| optix [Heliconius erato emma]
 gi|357966431|gb|AET97360.1| optix [Heliconius erato emma]
 gi|357966433|gb|AET97361.1| optix [Heliconius erato emma]
 gi|357966435|gb|AET97362.1| optix [Heliconius erato amphitrite]
 gi|357966437|gb|AET97363.1| optix [Heliconius erato amphitrite]
 gi|357966439|gb|AET97364.1| optix [Heliconius erato amphitrite]
 gi|357966441|gb|AET97365.1| optix [Heliconius erato amphitrite]
 gi|357966443|gb|AET97366.1| optix [Heliconius erato microclea]
 gi|357966445|gb|AET97367.1| optix [Heliconius erato microclea]
 gi|357966447|gb|AET97368.1| optix [Heliconius erato microclea]
 gi|357966449|gb|AET97369.1| optix [Heliconius erato microclea]
 gi|357966451|gb|AET97370.1| optix [Heliconius erato microclea]
 gi|357966453|gb|AET97371.1| optix [Heliconius erato microclea]
 gi|357966455|gb|AET97372.1| optix [Heliconius erato microclea]
 gi|357966457|gb|AET97373.1| optix [Heliconius erato petiverana]
 gi|357966459|gb|AET97374.1| optix [Heliconius erato petiverana]
 gi|357966461|gb|AET97375.1| optix [Heliconius erato cyrbia]
 gi|357966463|gb|AET97376.1| optix [Heliconius erato cyrbia]
 gi|357966465|gb|AET97377.1| optix [Heliconius himera]
 gi|357966467|gb|AET97378.1| optix [Heliconius himera]
 gi|357966469|gb|AET97379.1| optix [Heliconius erato cyrbia]
 gi|357966471|gb|AET97380.1| optix [Heliconius erato cyrbia]
 gi|357966473|gb|AET97381.1| optix [Heliconius himera]
 gi|357966475|gb|AET97382.1| optix [Heliconius erato hydara]
 gi|357966477|gb|AET97383.1| optix [Heliconius erato hydara]
 gi|357966481|gb|AET97385.1| optix [Heliconius erato hydara]
 gi|357966483|gb|AET97386.1| optix [Heliconius erato hydara]
 gi|357966485|gb|AET97387.1| optix [Heliconius erato lativitta]
 gi|357966487|gb|AET97388.1| optix [Heliconius erato lativitta]
 gi|357966489|gb|AET97389.1| optix [Heliconius erato lativitta]
 gi|357966491|gb|AET97390.1| optix [Heliconius erato lativitta]
 gi|357966493|gb|AET97391.1| optix [Heliconius melpomene cythera]
 gi|357966495|gb|AET97392.1| optix [Heliconius melpomene cythera]
 gi|357966497|gb|AET97393.1| optix [Heliconius melpomene cythera]
 gi|357966499|gb|AET97394.1| optix [Heliconius melpomene cythera]
 gi|357966501|gb|AET97395.1| optix [Heliconius melpomene cf. aglaope/malleti HMH-2011]
 gi|357966503|gb|AET97396.1| optix [Heliconius melpomene cf. aglaope/malleti HMH-2011]
 gi|357966505|gb|AET97397.1| optix [Heliconius melpomene cf. aglaope/malleti HMH-2011]
 gi|357966507|gb|AET97398.1| optix [Heliconius melpomene ecuadorensis]
 gi|357966509|gb|AET97399.1| optix [Heliconius melpomene rosina]
 gi|357966511|gb|AET97400.1| optix [Heliconius melpomene melpomene]
 gi|357966513|gb|AET97401.1| optix [Heliconius melpomene melpomene]
 gi|357966515|gb|AET97402.1| optix [Heliconius melpomene vulcanus]
 gi|357966517|gb|AET97403.1| optix [Heliconius melpomene melpomene]
 gi|357966519|gb|AET97404.1| optix [Heliconius melpomene rosina]
 gi|357966521|gb|AET97405.1| optix [Heliconius melpomene plesseni]
 gi|357966523|gb|AET97406.1| optix [Heliconius melpomene plesseni]
 gi|357966525|gb|AET97407.1| optix [Heliconius melpomene ecuadorensis]
 gi|357966527|gb|AET97408.1| optix [Heliconius melpomene plesseni]
 gi|357966529|gb|AET97409.1| optix [Heliconius melpomene ecuadorensis]
 gi|357966531|gb|AET97410.1| optix [Heliconius melpomene ecuadorensis]
 gi|357966533|gb|AET97411.1| optix [Heliconius melpomene melpomene]
 gi|357966535|gb|AET97412.1| optix [Heliconius melpomene vulcanus]
 gi|357966537|gb|AET97413.1| optix [Heliconius melpomene vulcanus]
 gi|357966539|gb|AET97414.1| optix [Heliconius melpomene rosina]
 gi|357966541|gb|AET97415.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966543|gb|AET97416.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966545|gb|AET97417.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966547|gb|AET97418.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966549|gb|AET97419.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966551|gb|AET97420.1| optix [Heliconius melpomene thelxiopeia]
 gi|357966553|gb|AET97421.1| optix [Heliconius melpomene nanna]
 gi|357966555|gb|AET97422.1| optix [Heliconius melpomene nanna]
 gi|357966557|gb|AET97423.1| optix [Heliconius melpomene nanna]
 gi|357966559|gb|AET97424.1| optix [Heliconius melpomene nanna]
 gi|357966561|gb|AET97425.1| optix [Heliconius melpomene nanna]
 gi|357966563|gb|AET97426.1| optix [Heliconius melpomene rosina]
 gi|357966565|gb|AET97427.1| optix [Heliconius ismenius]
 gi|357966567|gb|AET97428.1| optix [Heliconius melpomene rosina]
 gi|357966569|gb|AET97429.1| optix [Heliconius melpomene melpomene]
 gi|357966571|gb|AET97430.1| optix [Heliconius melpomene melpomene]
 gi|357966573|gb|AET97431.1| optix [Heliconius melpomene melpomene]
 gi|357966575|gb|AET97432.1| optix [Heliconius melpomene melpomene]
 gi|357966577|gb|AET97433.1| optix [Heliconius numata]
 gi|357966579|gb|AET97434.1| optix [Heliconius melpomene amaryllis]
 gi|357966581|gb|AET97435.1| optix [Heliconius melpomene aglaope]
 gi|357966583|gb|AET97436.1| optix [Heliconius melpomene aglaope]
 gi|357966585|gb|AET97437.1| optix [Heliconius melpomene aglaope]
 gi|357966587|gb|AET97438.1| optix [Heliconius melpomene aglaope]
 gi|357966589|gb|AET97439.1| optix [Heliconius melpomene aglaope]
 gi|357966591|gb|AET97440.1| optix [Heliconius melpomene amaryllis]
 gi|357966593|gb|AET97441.1| optix [Heliconius melpomene amaryllis]
 gi|357966597|gb|AET97443.1| optix [Heliconius melpomene amaryllis]
 gi|357966599|gb|AET97444.1| optix [Heliconius melpomene amaryllis]
 gi|357966603|gb|AET97446.1| optix [Heliconius melpomene xenoclea]
 gi|357966605|gb|AET97447.1| optix [Heliconius melpomene xenoclea]
 gi|357966607|gb|AET97448.1| optix [Heliconius melpomene xenoclea]
 gi|357966609|gb|AET97449.1| optix [Heliconius melpomene xenoclea]
 gi|357966615|gb|AET97452.1| optix [Heliconius melpomene melpomene]
 gi|357966617|gb|AET97453.1| optix [Heliconius melpomene melpomene]
 gi|357966619|gb|AET97454.1| optix [Heliconius melpomene melpomene]
 gi|357966621|gb|AET97455.1| optix [Heliconius melpomene melpomene]
 gi|357966623|gb|AET97456.1| optix [Heliconius melpomene cf. aglaope/malleti HMH-2011]
          Length = 142

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 87/101 (86%)

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
           +F   +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE
Sbjct: 1   RFQRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKE 60

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           ++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  RTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 101



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 33  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 92

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 93  TQVGNWF 99


>gi|357966425|gb|AET97357.1| optix [Heliconius erato emma]
          Length = 142

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 87/101 (86%)

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
           +F   +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE
Sbjct: 1   RFXRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKE 60

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           ++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  RTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 101



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 33  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 92

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 93  TQVGNWF 99


>gi|384402810|gb|AFH88772.1| sine oculis, partial [Gammarus minus]
          Length = 86

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/86 (88%), Positives = 81/86 (94%)

Query: 246 SLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEA 305
           SLPACE LH+NESVLKAKA+V+F+RGNFKDLYRILESH FS HNH KLQ LWLKAHY+EA
Sbjct: 1   SLPACEHLHQNESVLKAKALVSFNRGNFKDLYRILESHNFSSHNHNKLQQLWLKAHYIEA 60

Query: 306 EKLRGRPLGAVGKYRVRRKFPLPRTI 331
           EKLRGRPLGAVGKYRVRRKFPLPRTI
Sbjct: 61  EKLRGRPLGAVGKYRVRRKFPLPRTI 86


>gi|357966601|gb|AET97445.1| optix [Heliconius melpomene xenoclea]
 gi|357966611|gb|AET97450.1| optix [Heliconius melpomene amaryllis]
 gi|357966613|gb|AET97451.1| optix [Heliconius melpomene amaryllis]
          Length = 138

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 85/96 (88%)

Query: 289 NHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSV 348
           +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+
Sbjct: 2   SHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSL 61

Query: 349 LRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 62  LREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 97



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 29  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 88

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 89  TQVGNWF 95


>gi|357966423|gb|AET97356.1| optix [Heliconius erato favorinus]
 gi|357966479|gb|AET97384.1| optix [Heliconius erato hydara]
          Length = 142

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 86/101 (85%)

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
           +F   +H KLQALW +AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE
Sbjct: 1   RFQRSSHAKLQALWREAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKE 60

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           ++RS+LR+WY  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  RTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 101



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 33  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 92

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 93  TQVGNWF 99


>gi|170048193|ref|XP_001851578.1| six/sine homebox transcription factors [Culex quinquefasciatus]
 gi|167870338|gb|EDS33721.1| six/sine homebox transcription factors [Culex quinquefasciatus]
          Length = 148

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/87 (82%), Positives = 80/87 (91%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
           +PSFGFTQEQVACVCEVLQQ+GNIERLGRFLWSLP C+KL  NESVLKAKA+VAFHRGNF
Sbjct: 55  MPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGNF 114

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKA 300
           K+LYR+LE H ++PHNH KLQALWLK 
Sbjct: 115 KELYRLLEHHSYAPHNHAKLQALWLKG 141


>gi|357966595|gb|AET97442.1| optix [Heliconius melpomene amaryllis]
          Length = 138

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 84/96 (87%)

Query: 289 NHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSV 348
           +H KLQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+
Sbjct: 2   SHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSL 61

Query: 349 LRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           LR+WY  +PYP+P +KRELA ATG T TQV NWFKN
Sbjct: 62  LREWYLQDPYPNPTKKRELAAATGXTPTQVGNWFKN 97



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATG T 
Sbjct: 29  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGXTP 88

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 89  TQVGNWF 95


>gi|402241089|gb|AFQ40325.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
          Length = 133

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 82/92 (89%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPSKKRELAAATGLTPTQVGNWFKN 92



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAAATGLTP 83

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 84  TQVGNWF 90


>gi|402240951|gb|AFQ40256.1| optix, partial [Heliconius heurippa]
 gi|402240953|gb|AFQ40257.1| optix, partial [Heliconius heurippa]
 gi|402240955|gb|AFQ40258.1| optix, partial [Heliconius heurippa]
 gi|402240957|gb|AFQ40259.1| optix, partial [Heliconius heurippa]
 gi|402240959|gb|AFQ40260.1| optix, partial [Heliconius heurippa]
 gi|402240961|gb|AFQ40261.1| optix, partial [Heliconius heurippa]
 gi|402240963|gb|AFQ40262.1| optix, partial [Heliconius heurippa]
 gi|402240965|gb|AFQ40263.1| optix, partial [Heliconius heurippa]
 gi|402240967|gb|AFQ40264.1| optix, partial [Heliconius heurippa]
 gi|402240969|gb|AFQ40265.1| optix, partial [Heliconius heurippa]
 gi|402240973|gb|AFQ40267.1| optix, partial [Heliconius heurippa]
 gi|402240975|gb|AFQ40268.1| optix, partial [Heliconius heurippa]
 gi|402240977|gb|AFQ40269.1| optix, partial [Heliconius heurippa]
 gi|402240979|gb|AFQ40270.1| optix, partial [Heliconius heurippa]
 gi|402240981|gb|AFQ40271.1| optix, partial [Heliconius heurippa]
 gi|402240983|gb|AFQ40272.1| optix, partial [Heliconius heurippa]
 gi|402240985|gb|AFQ40273.1| optix, partial [Heliconius heurippa]
 gi|402240987|gb|AFQ40274.1| optix, partial [Heliconius cydno cordula]
 gi|402240989|gb|AFQ40275.1| optix, partial [Heliconius cydno cordula]
 gi|402240991|gb|AFQ40276.1| optix, partial [Heliconius cydno cordula]
 gi|402240993|gb|AFQ40277.1| optix, partial [Heliconius cydno cordula]
 gi|402240995|gb|AFQ40278.1| optix, partial [Heliconius cydno cordula]
 gi|402240997|gb|AFQ40279.1| optix, partial [Heliconius cydno cordula]
 gi|402240999|gb|AFQ40280.1| optix, partial [Heliconius cydno cordula]
 gi|402241001|gb|AFQ40281.1| optix, partial [Heliconius cydno cordula]
 gi|402241003|gb|AFQ40282.1| optix, partial [Heliconius cydno chioneus]
 gi|402241005|gb|AFQ40283.1| optix, partial [Heliconius cydno chioneus]
 gi|402241007|gb|AFQ40284.1| optix, partial [Heliconius cydno chioneus]
 gi|402241009|gb|AFQ40285.1| optix, partial [Heliconius cydno chioneus]
 gi|402241015|gb|AFQ40288.1| optix, partial [Heliconius cydno cydnides]
 gi|402241017|gb|AFQ40289.1| optix, partial [Heliconius cydno cydnides]
 gi|402241019|gb|AFQ40290.1| optix, partial [Heliconius cydno cydnides]
 gi|402241021|gb|AFQ40291.1| optix, partial [Heliconius cydno cydnides]
 gi|402241025|gb|AFQ40293.1| optix, partial [Heliconius cydno cydnides]
 gi|402241031|gb|AFQ40296.1| optix, partial [Heliconius cydno zelinde]
 gi|402241033|gb|AFQ40297.1| optix, partial [Heliconius cydno zelinde]
 gi|402241035|gb|AFQ40298.1| optix, partial [Heliconius cydno zelinde]
 gi|402241037|gb|AFQ40299.1| optix, partial [Heliconius cydno zelinde]
 gi|402241039|gb|AFQ40300.1| optix, partial [Heliconius cydno weymeri]
 gi|402241041|gb|AFQ40301.1| optix, partial [Heliconius cydno weymeri]
 gi|402241043|gb|AFQ40302.1| optix, partial [Heliconius cydno weymeri]
 gi|402241045|gb|AFQ40303.1| optix, partial [Heliconius cydno weymeri]
 gi|402241055|gb|AFQ40308.1| optix, partial [Heliconius cydno weymeri]
 gi|402241057|gb|AFQ40309.1| optix, partial [Heliconius cydno weymeri]
 gi|402241059|gb|AFQ40310.1| optix, partial [Heliconius cydno weymeri]
 gi|402241061|gb|AFQ40311.1| optix, partial [Heliconius cydno weymeri]
 gi|402241075|gb|AFQ40318.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241077|gb|AFQ40319.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241079|gb|AFQ40320.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241081|gb|AFQ40321.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241083|gb|AFQ40322.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241085|gb|AFQ40323.1| optix, partial [Heliconius cydno wanningeri]
 gi|402241087|gb|AFQ40324.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241091|gb|AFQ40326.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241093|gb|AFQ40327.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241095|gb|AFQ40328.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241097|gb|AFQ40329.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241099|gb|AFQ40330.1| optix, partial [Heliconius timareta timareta]
 gi|402241101|gb|AFQ40331.1| optix, partial [Heliconius timareta timareta]
 gi|402241103|gb|AFQ40332.1| optix, partial [Heliconius timareta timareta]
 gi|402241105|gb|AFQ40333.1| optix, partial [Heliconius timareta timareta]
 gi|402241107|gb|AFQ40334.1| optix, partial [Heliconius timareta timareta]
 gi|402241109|gb|AFQ40335.1| optix, partial [Heliconius timareta timareta]
 gi|402241111|gb|AFQ40336.1| optix, partial [Heliconius timareta timareta]
 gi|402241113|gb|AFQ40337.1| optix, partial [Heliconius timareta timareta]
 gi|402241115|gb|AFQ40338.1| optix, partial [Heliconius timareta timareta]
 gi|402241117|gb|AFQ40339.1| optix, partial [Heliconius timareta timareta]
 gi|402241119|gb|AFQ40340.1| optix, partial [Heliconius timareta timareta]
 gi|402241121|gb|AFQ40341.1| optix, partial [Heliconius timareta timareta]
 gi|402241123|gb|AFQ40342.1| optix, partial [Heliconius timareta timareta]
 gi|402241125|gb|AFQ40343.1| optix, partial [Heliconius timareta timareta]
 gi|402241127|gb|AFQ40344.1| optix, partial [Heliconius timareta timareta]
 gi|402241129|gb|AFQ40345.1| optix, partial [Heliconius timareta timareta]
 gi|402241131|gb|AFQ40346.1| optix, partial [Heliconius timareta timareta]
 gi|402241133|gb|AFQ40347.1| optix, partial [Heliconius timareta timareta]
 gi|402241135|gb|AFQ40348.1| optix, partial [Heliconius timareta timareta]
 gi|402241137|gb|AFQ40349.1| optix, partial [Heliconius timareta timareta]
 gi|402241139|gb|AFQ40350.1| optix, partial [Heliconius timareta timareta]
 gi|402241141|gb|AFQ40351.1| optix, partial [Heliconius timareta timareta]
 gi|402241143|gb|AFQ40352.1| optix, partial [Heliconius timareta timareta]
 gi|402241145|gb|AFQ40353.1| optix, partial [Heliconius timareta timareta]
 gi|402241147|gb|AFQ40354.1| optix, partial [Heliconius timareta timareta]
 gi|402241149|gb|AFQ40355.1| optix, partial [Heliconius timareta timareta]
 gi|402241151|gb|AFQ40356.1| optix, partial [Heliconius timareta timareta]
 gi|402241153|gb|AFQ40357.1| optix, partial [Heliconius timareta timareta]
 gi|402241155|gb|AFQ40358.1| optix, partial [Heliconius timareta timareta]
 gi|402241157|gb|AFQ40359.1| optix, partial [Heliconius timareta timareta]
 gi|402241159|gb|AFQ40360.1| optix, partial [Heliconius timareta timareta]
 gi|402241161|gb|AFQ40361.1| optix, partial [Heliconius timareta timareta]
 gi|402241163|gb|AFQ40362.1| optix, partial [Heliconius timareta timareta]
 gi|402241165|gb|AFQ40363.1| optix, partial [Heliconius timareta timareta]
 gi|402241167|gb|AFQ40364.1| optix, partial [Heliconius timareta timareta]
 gi|402241169|gb|AFQ40365.1| optix, partial [Heliconius timareta timareta]
 gi|402241171|gb|AFQ40366.1| optix, partial [Heliconius timareta timareta]
 gi|402241173|gb|AFQ40367.1| optix, partial [Heliconius timareta timareta]
 gi|402241175|gb|AFQ40368.1| optix, partial [Heliconius timareta timareta]
 gi|402241177|gb|AFQ40369.1| optix, partial [Heliconius timareta timareta]
 gi|402241179|gb|AFQ40370.1| optix, partial [Heliconius timareta timareta]
 gi|402241181|gb|AFQ40371.1| optix, partial [Heliconius timareta timareta]
 gi|402241183|gb|AFQ40372.1| optix, partial [Heliconius timareta timareta]
 gi|402241197|gb|AFQ40379.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241199|gb|AFQ40380.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241201|gb|AFQ40381.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241203|gb|AFQ40382.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241205|gb|AFQ40383.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241207|gb|AFQ40384.1| optix, partial [Heliconius timareta ssp. n. CPD-2012]
 gi|402241209|gb|AFQ40385.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241211|gb|AFQ40386.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241213|gb|AFQ40387.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241215|gb|AFQ40388.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241217|gb|AFQ40389.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241219|gb|AFQ40390.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241221|gb|AFQ40391.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241223|gb|AFQ40392.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241225|gb|AFQ40393.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241227|gb|AFQ40394.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241229|gb|AFQ40395.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241231|gb|AFQ40396.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241233|gb|AFQ40397.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241235|gb|AFQ40398.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241237|gb|AFQ40399.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241239|gb|AFQ40400.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241241|gb|AFQ40401.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241243|gb|AFQ40402.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241245|gb|AFQ40403.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241247|gb|AFQ40404.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241249|gb|AFQ40405.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241251|gb|AFQ40406.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241253|gb|AFQ40407.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241255|gb|AFQ40408.1| optix, partial [Heliconius melpomene melpomene]
 gi|402241257|gb|AFQ40409.1| optix, partial [Heliconius melpomene rosina]
 gi|402241259|gb|AFQ40410.1| optix, partial [Heliconius melpomene rosina]
 gi|402241261|gb|AFQ40411.1| optix, partial [Heliconius melpomene rosina]
 gi|402241263|gb|AFQ40412.1| optix, partial [Heliconius melpomene rosina]
 gi|402241265|gb|AFQ40413.1| optix, partial [Heliconius melpomene rosina]
 gi|402241267|gb|AFQ40414.1| optix, partial [Heliconius melpomene rosina]
 gi|402241269|gb|AFQ40415.1| optix, partial [Heliconius melpomene cythera]
 gi|402241271|gb|AFQ40416.1| optix, partial [Heliconius melpomene cythera]
 gi|402241273|gb|AFQ40417.1| optix, partial [Heliconius melpomene cythera]
 gi|402241275|gb|AFQ40418.1| optix, partial [Heliconius melpomene cythera]
 gi|402241277|gb|AFQ40419.1| optix, partial [Heliconius melpomene cythera]
 gi|402241279|gb|AFQ40420.1| optix, partial [Heliconius melpomene cythera]
 gi|402241281|gb|AFQ40421.1| optix, partial [Heliconius melpomene vulcanus]
 gi|402241283|gb|AFQ40422.1| optix, partial [Heliconius melpomene vulcanus]
 gi|402241285|gb|AFQ40423.1| optix, partial [Heliconius melpomene vulcanus]
 gi|402241287|gb|AFQ40424.1| optix, partial [Heliconius melpomene vulcanus]
 gi|402241289|gb|AFQ40425.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241291|gb|AFQ40426.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241293|gb|AFQ40427.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241295|gb|AFQ40428.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241297|gb|AFQ40429.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241299|gb|AFQ40430.1| optix, partial [Heliconius melpomene amaryllis]
 gi|402241301|gb|AFQ40431.1| optix, partial [Heliconius melpomene aglaope]
 gi|402241305|gb|AFQ40433.1| optix, partial [Heliconius melpomene aglaope]
 gi|402241307|gb|AFQ40434.1| optix, partial [Heliconius melpomene aglaope]
 gi|402241309|gb|AFQ40435.1| optix, partial [Heliconius melpomene aglaope]
 gi|402241311|gb|AFQ40436.1| optix, partial [Heliconius melpomene aglaope]
 gi|402241313|gb|AFQ40437.1| optix, partial [Heliconius melpomene malleti]
 gi|402241315|gb|AFQ40438.1| optix, partial [Heliconius melpomene malleti]
 gi|402241317|gb|AFQ40439.1| optix, partial [Heliconius melpomene malleti]
 gi|402241319|gb|AFQ40440.1| optix, partial [Heliconius melpomene malleti]
 gi|402241321|gb|AFQ40441.1| optix, partial [Heliconius melpomene malleti]
 gi|402241323|gb|AFQ40442.1| optix, partial [Heliconius melpomene malleti]
 gi|402241325|gb|AFQ40443.1| optix, partial [Heliconius melpomene malleti]
 gi|402241327|gb|AFQ40444.1| optix, partial [Heliconius melpomene malleti]
 gi|402241329|gb|AFQ40445.1| optix, partial [Heliconius melpomene malleti]
 gi|402241331|gb|AFQ40446.1| optix, partial [Heliconius melpomene malleti]
 gi|402241333|gb|AFQ40447.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241335|gb|AFQ40448.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241337|gb|AFQ40449.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241339|gb|AFQ40450.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241341|gb|AFQ40451.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241343|gb|AFQ40452.1| optix, partial [Heliconius melpomene plesseni]
 gi|402241345|gb|AFQ40453.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241347|gb|AFQ40454.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241349|gb|AFQ40455.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241351|gb|AFQ40456.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241353|gb|AFQ40457.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241355|gb|AFQ40458.1| optix, partial [Heliconius melpomene ecuadorensis]
 gi|402241361|gb|AFQ40461.1| optix, partial [Heliconius melpomene thelxiopeia]
 gi|402241363|gb|AFQ40462.1| optix, partial [Heliconius melpomene thelxiopeia]
 gi|402241365|gb|AFQ40463.1| optix, partial [Heliconius melpomene amandus]
 gi|402241367|gb|AFQ40464.1| optix, partial [Heliconius melpomene amandus]
 gi|402241369|gb|AFQ40465.1| optix, partial [Heliconius melpomene amandus]
 gi|402241371|gb|AFQ40466.1| optix, partial [Heliconius melpomene amandus]
 gi|402241377|gb|AFQ40469.1| optix, partial [Heliconius melpomene amandus]
 gi|402241379|gb|AFQ40470.1| optix, partial [Heliconius melpomene amandus]
 gi|402241381|gb|AFQ40471.1| optix, partial [Heliconius timareta timareta]
 gi|402241383|gb|AFQ40472.1| optix, partial [Heliconius melpomene malleti]
 gi|402241385|gb|AFQ40473.1| optix, partial [Heliconius melpomene malleti]
          Length = 133

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 82/92 (89%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 92



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 84  TQVGNWFKN 92


>gi|402241303|gb|AFQ40432.1| optix, partial [Heliconius melpomene aglaope]
          Length = 133

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 82/92 (89%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 92



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 84  TQVGNWFKN 92


>gi|402241373|gb|AFQ40467.1| optix, partial [Heliconius melpomene amandus]
 gi|402241375|gb|AFQ40468.1| optix, partial [Heliconius melpomene amandus]
          Length = 133

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 81/92 (88%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRGRPLG V KYRVR KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGRPLGPVDKYRVRFKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 92



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 59/69 (85%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRFKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 84  TQVGNWFKN 92


>gi|402240949|gb|AFQ40255.1| optix, partial [Heliconius numata]
 gi|402241011|gb|AFQ40286.1| optix, partial [Heliconius cydno chioneus]
 gi|402241013|gb|AFQ40287.1| optix, partial [Heliconius cydno chioneus]
 gi|402241185|gb|AFQ40373.1| optix, partial [Heliconius timareta ssp. NG-2008]
 gi|402241187|gb|AFQ40374.1| optix, partial [Heliconius timareta ssp. NG-2008]
 gi|402241189|gb|AFQ40375.1| optix, partial [Heliconius timareta ssp. NG-2008]
 gi|402241191|gb|AFQ40376.1| optix, partial [Heliconius timareta ssp. NG-2008]
 gi|402241193|gb|AFQ40377.1| optix, partial [Heliconius timareta ssp. NG-2008]
 gi|402241195|gb|AFQ40378.1| optix, partial [Heliconius timareta ssp. NG-2008]
          Length = 133

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 81/92 (88%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALW +AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWREAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 92



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 84  TQVGNWFKN 92


>gi|444705909|gb|ELW47287.1| Homeobox protein SIX3 [Tupaia chinensis]
          Length = 381

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/89 (74%), Positives = 80/89 (89%)

Query: 296 LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH 355
           +WL+AHY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  
Sbjct: 1   MWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQ 60

Query: 356 NPYPSPREKRELAEATGLTTTQVSNWFKN 384
           +PYP+P +KRELA+ATGLT TQV NWFKN
Sbjct: 61  DPYPNPSKKRELAQATGLTPTQVGNWFKN 89



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 21  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 80

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 81  TQVGNWF 87


>gi|395745961|ref|XP_003778364.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein SIX6 [Pongo
           abelii]
          Length = 334

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 18/200 (9%)

Query: 214 LPSFGFTQEQVACVCE--VLQQSGNIERLGRFL-WSLP----AC-EKLHKNESVLKAKAM 265
           LP   F+ ++VA      + ++   +ERLGRF  WSLP    AC E L+KNESVL   + 
Sbjct: 54  LPILNFSPQRVARGMRRPLERERAMLERLGRFPSWSLPVAPAACDEALNKNESVLARTSQ 113

Query: 266 V-AFHRGNFKD-LYRILESHQFSPHNH-PKLQALWLKAHYVEA-----EKLRGRPLGAVG 317
              F  GN++  L+  LE+HQ    +  P +QALWL+AHY         K  G P G   
Sbjct: 114 SWPFTVGNYRGALFIFLENHQVHQGSRTPSMQALWLEAHYQAGLRSWRGKAPGGPAGTSD 173

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           + + R  FPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQ
Sbjct: 174 RSKXR-SFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQ 232

Query: 378 VSNWFKN-RRQRDRAAEQKD 396
           V NWFK    +RDRAA  K+
Sbjct: 233 VGNWFKKPPDKRDRAAAAKN 252



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 52/60 (86%)

Query: 133 RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           R FPLPRTIWDGE+ ++CFKE++R +LR+WY  +PYP+P +KRELA+ATGLT TQV NWF
Sbjct: 178 RSFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWF 237


>gi|402241023|gb|AFQ40292.1| optix, partial [Heliconius cydno cydnides]
 gi|402241027|gb|AFQ40294.1| optix, partial [Heliconius cydno zelinde]
 gi|402241029|gb|AFQ40295.1| optix, partial [Heliconius cydno zelinde]
 gi|402241067|gb|AFQ40314.1| optix, partial [Heliconius cydno lisethae]
 gi|402241069|gb|AFQ40315.1| optix, partial [Heliconius cydno lisethae]
 gi|402241071|gb|AFQ40316.1| optix, partial [Heliconius cydno lisethae]
 gi|402241073|gb|AFQ40317.1| optix, partial [Heliconius cydno lisethae]
          Length = 133

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 81/92 (88%)

Query: 293 LQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 352
           LQALWL+AHY EAE+LRG PLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+W
Sbjct: 1   LQALWLEAHYQEAERLRGCPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREW 60

Query: 353 YTHNPYPSPREKRELAEATGLTTTQVSNWFKN 384
           Y  +PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  YLQDPYPNPTKKRELAAATGLTPTQVGNWFKN 92



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 24  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 83

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 84  TQVGNWFKN 92


>gi|71996087|ref|NP_506563.2| Protein UNC-39 [Caenorhabditis elegans]
 gi|58081860|emb|CAB04483.2| Protein UNC-39 [Caenorhabditis elegans]
          Length = 335

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 129/215 (60%), Gaps = 12/215 (5%)

Query: 189 SNWFSSANITSSPNTSTSTASIS-PILPSFG-----FTQEQVACVCEVLQQSGNIERLGR 242
           S+  + +++  +P+ S ++ASIS P +P+FG     ++ EQ+  +   L Q+ + +RL  
Sbjct: 61  SHILTPSSVIPTPSPSVASASISSPTIPAFGCTMSEYSMEQMEAISTSLFQARDGDRLVA 120

Query: 243 FLWSL-----PACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALW 297
           F   L     P      ++E+++ A     +H   F+ L+ +L +  F   ++  LQ +W
Sbjct: 121 FFKQLESLYGPNAVDHLRSEAIIVAYTYALYHSNEFETLFHLLSNRHFQQRHYNDLQDIW 180

Query: 298 LKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-N 356
             A Y E++  RG+ L  V KYR+RRKFP P+TIWDGEE  Y FK+ SR  L+ ++ + +
Sbjct: 181 HHARYKESQLKRGKELNPVEKYRLRRKFPAPKTIWDGEEIVYSFKDSSRKFLKQFFRNVS 240

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
            YP+  +KRE++ ATGL   Q+SNWFKNRRQRD++
Sbjct: 241 EYPTQEQKREISRATGLKIVQISNWFKNRRQRDKS 275



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           KYR+RRKFP P+TIWDGEE  Y FK+ SR  L+ ++ + + YP+  +KRE++ ATGL   
Sbjct: 201 KYRLRRKFPAPKTIWDGEEIVYSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKIV 260

Query: 187 QVSNWF 192
           Q+SNWF
Sbjct: 261 QISNWF 266


>gi|432096678|gb|ELK27261.1| Homeobox protein SIX4 [Myotis davidii]
          Length = 630

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/141 (53%), Positives = 88/141 (62%), Gaps = 27/141 (19%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLR 309
            + L  NES+LKA+A+VAFH+G + +LY ILESH F   NHP LQ LW KA Y EAE+ R
Sbjct: 15  SDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERAR 74

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAE 369
           GRPLGA                           EKSR+ L++ Y  N YPSP EKR LA+
Sbjct: 75  GRPLGA---------------------------EKSRNALKELYKQNRYPSPAEKRHLAK 107

Query: 370 ATGLTTTQVSNWFKNRRQRDR 390
            TGL+ TQVSNWFKNRRQRDR
Sbjct: 108 ITGLSLTQVSNWFKNRRQRDR 128



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 31/40 (77%)

Query: 153 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           EKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWF
Sbjct: 81  EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWF 120


>gi|402241047|gb|AFQ40304.1| optix, partial [Heliconius cydno weymeri]
 gi|402241049|gb|AFQ40305.1| optix, partial [Heliconius cydno weymeri]
 gi|402241051|gb|AFQ40306.1| optix, partial [Heliconius cydno weymeri]
 gi|402241053|gb|AFQ40307.1| optix, partial [Heliconius cydno weymeri]
 gi|402241063|gb|AFQ40312.1| optix, partial [Heliconius cydno lisethae]
 gi|402241065|gb|AFQ40313.1| optix, partial [Heliconius cydno lisethae]
          Length = 129

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 78/88 (88%)

Query: 297 WLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN 356
           WL+AHY EAE+LRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +
Sbjct: 1   WLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQD 60

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKN 384
           PYP+P +KRELA ATGLT TQV NWFKN
Sbjct: 61  PYPNPTKKRELAAATGLTPTQVGNWFKN 88



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 20  VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 79

Query: 186 TQVSNWFSS 194
           TQV NWF +
Sbjct: 80  TQVGNWFKN 88


>gi|224051863|ref|XP_002200403.1| PREDICTED: homeobox protein SIX4 [Taeniopygia guttata]
          Length = 710

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 77/102 (75%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYR 278
           F+ +  ACVCE LQQ GN++RL RFLWSLP  + L  NES++KA+A+VAFH+G + +LY 
Sbjct: 97  FSPDHFACVCEALQQGGNLDRLARFLWSLPPSDLLRGNESLMKARALVAFHQGIYAELYS 156

Query: 279 ILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR 320
           ILESH F   NHP LQ LW KA Y EAE+ RGRPLGAV KYR
Sbjct: 157 ILESHNFDSSNHPLLQELWYKARYTEAERARGRPLGAVDKYR 198


>gi|339251114|ref|XP_003373040.1| homeobox protein SIX4 [Trichinella spiralis]
 gi|316969086|gb|EFV53246.1| homeobox protein SIX4 [Trichinella spiralis]
          Length = 200

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 1/174 (0%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNE-SVLKAKAMVAFHRGNFKD 275
             +T EQ+ C+CE L Q+ +   + R    L   E LH    S+++A+ +    +  FK+
Sbjct: 16  LAYTDEQLMCICETLCQAKDYPSICRLFDYLYPNEYLHSTHPSLMRARLLYLLMKCRFKE 75

Query: 276 LYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           +Y +L S  F    H +LQ +W +AHY E E+ R +PLGAV KYR+R+K P P TIWDG+
Sbjct: 76  IYDLLSSSVFDSRYHEELQEIWWQAHYAELEQARCKPLGAVEKYRLRKKHPPPSTIWDGQ 135

Query: 336 ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           ET Y FKE SR  L+++Y  N YPS  EKR +AE +GL   Q    F +R  R+
Sbjct: 136 ETVYSFKENSRKQLKEFYKENKYPSAEEKRVIAEKSGLNFLQTMRGFDHRSARE 189



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+K P P TIWDG+ET Y FKE SR  L+++Y  N YPS  EKR +AE +GL  
Sbjct: 116 VEKYRLRKKHPPPSTIWDGQETVYSFKENSRKQLKEFYKENKYPSAEEKRVIAEKSGLNF 175

Query: 186 TQVSNWFS 193
            Q    F 
Sbjct: 176 LQTMRGFD 183


>gi|341878144|gb|EGT34079.1| CBN-UNC-39 protein [Caenorhabditis brenneri]
          Length = 344

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 12/206 (5%)

Query: 197 ITSSPNTSTSTASIS-PILPSFGFTQ-----EQVACVCEVLQQSGNIERLGRFLWSLPA- 249
           + + P+   S + IS P L +FGF       EQ+  +   L Q+ + ERL  F   L A 
Sbjct: 88  LITPPSVIPSLSPISSPTLSTFGFQMADYSIEQMEAIATSLFQARDGERLVSFFNQLKAI 147

Query: 250 --CEKLHK--NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEA 305
                L++  +E +L A     +H  +F+ L+ +L +H F       LQ +W  A Y E+
Sbjct: 148 YGATALNQIVSEPILVAYTYALYHSNDFEQLFNLLATHSFQHIYFNDLQDIWHHARYRES 207

Query: 306 EKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREK 364
           +  RG+ L  V KYR+RRKFP P+TIWDGEET Y FK+ SR  L+ ++     YPS  +K
Sbjct: 208 QLKRGKELNPVEKYRLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFQEITQYPSQEQK 267

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDR 390
           RE+++ TGL   Q+SNWFKNRRQRD+
Sbjct: 268 REISKHTGLKIVQISNWFKNRRQRDK 293



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           KYR+RRKFP P+TIWDGEET Y FK+ SR  L+ ++     YPS  +KRE+++ TGL   
Sbjct: 220 KYRLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFQEITQYPSQEQKREISKHTGLKIV 279

Query: 187 QVSNWF 192
           Q+SNWF
Sbjct: 280 QISNWF 285


>gi|256078046|ref|XP_002575309.1| six/sine homebox transcription factors [Schistosoma mansoni]
 gi|353231483|emb|CCD77901.1| putative six/sine homebox transcription factors [Schistosoma
           mansoni]
          Length = 363

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 102/151 (67%), Gaps = 2/151 (1%)

Query: 251 EKLHK-NESVLKAKAMVAFHRGNFKDLYRILE-SHQFSPHNHPKLQALWLKAHYVEAEKL 308
           EKL++  E ++K+  +++++  N+K +Y +++ +H F+  +   LQ +W   HY   EKL
Sbjct: 55  EKLYELRELIIKSFIILSYNDHNYKLVYELIKYNHFFNKKHQIILQHIWYNIHYDIIEKL 114

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           R R L AV KYR+R+K+PLP TIWDGE+  Y FK+  R +L ++Y +N YP+  EK E++
Sbjct: 115 RQRSLTAVDKYRIRKKYPLPNTIWDGEKIFYYFKQNIRYLLINYYQYNKYPNSIEKYEIS 174

Query: 369 EATGLTTTQVSNWFKNRRQRDRAAEQKDGSV 399
             TGLT TQVSNWFKN RQRD++ E  D  +
Sbjct: 175 RKTGLTLTQVSNWFKNHRQRDKSLESTDLYI 205



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 49/65 (75%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+K+PLP TIWDGE+  Y FK+  R +L ++Y +N YP+  EK E++  TGLT TQ
Sbjct: 124 KYRIRKKYPLPNTIWDGEKIFYYFKQNIRYLLINYYQYNKYPNSIEKYEISRKTGLTLTQ 183

Query: 188 VSNWF 192
           VSNWF
Sbjct: 184 VSNWF 188


>gi|355703671|gb|EHH30162.1| hypothetical protein EGK_10769, partial [Macaca mulatta]
          Length = 570

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/87 (72%), Positives = 72/87 (82%)

Query: 304 EAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPRE 363
           EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P E
Sbjct: 2   EAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDE 61

Query: 364 KRELAEATGLTTTQVSNWFKNRRQRDR 390
           KR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 62  KRRLATLTGLSLTQVSNWFKNRRQRDR 88



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 14  VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 73

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 74  TQVSNWF 80


>gi|324528411|gb|ADY48911.1| Homeobox protein SIX4 [Ascaris suum]
          Length = 161

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 91/135 (67%)

Query: 258 SVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVG 317
           SVL+A     FH   F++L++ + ++ F      +LQ LW KA Y E E+ R + LGAV 
Sbjct: 10  SVLRAYLYTLFHTRRFEELFQAIAANTFEQKYFEELQDLWYKARYAENEQRRQKELGAVE 69

Query: 318 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           KYR+R+K P PR+IWDG+ET Y FKE +R VLR +Y  N YP+  +K+E+A  T L   Q
Sbjct: 70  KYRLRKKHPPPRSIWDGQETIYSFKENARKVLRQFYKRNKYPTLEDKKEIARITDLQIIQ 129

Query: 378 VSNWFKNRRQRDRAA 392
           +SNWFKNRRQRD+++
Sbjct: 130 ISNWFKNRRQRDKSS 144



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 52/83 (62%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           KYR+R+K P PR+IWDG+ET Y FKE +R VLR +Y  N YP+  +K+E+A  T L   Q
Sbjct: 70  KYRLRKKHPPPRSIWDGQETIYSFKENARKVLRQFYKRNKYPTLEDKKEIARITDLQIIQ 129

Query: 188 VSNWFSSANITSSPNTSTSTASI 210
           +SNWF +       +T   T  +
Sbjct: 130 ISNWFKNRRQRDKSSTDRFTPPV 152


>gi|358332389|dbj|GAA37311.2| homeobox protein SIX4 [Clonorchis sinensis]
          Length = 231

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 105/170 (61%), Gaps = 11/170 (6%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPA-----------CEKLHKNESVLKAKAMVA 267
            T  +VAC+CEVL +  NI +L +FL SLP             E     +S+LKA   VA
Sbjct: 19  LTDTKVACICEVLLRENNILKLEQFLQSLPVDWPFLSTSENHGEPSPAEQSILKAVCFVA 78

Query: 268 FHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPL 327
           F   N+  +  IL   QFS  + P LQ LW + HY + E+ RG+ LGAV KYR+RR+ PL
Sbjct: 79  FENSNYVTVLHILRHIQFSTWHQPLLQQLWYQTHYAQTERRRGKKLGAVDKYRLRRRHPL 138

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           PRTIWDGEET YCFK+  R +L+ ++  N YP+P EK  LA+ATGL+ TQ
Sbjct: 139 PRTIWDGEETVYCFKQSVRHILQQYFLENKYPNPEEKFTLAKATGLSCTQ 188



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 48/62 (77%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+RR+ PLPRTIWDGEET YCFK+  R +L+ ++  N YP+P EK  LA+ATGL+ 
Sbjct: 127 VDKYRLRRRHPLPRTIWDGEETVYCFKQSVRHILQQYFLENKYPNPEEKFTLAKATGLSC 186

Query: 186 TQ 187
           TQ
Sbjct: 187 TQ 188


>gi|118600597|gb|AAH30289.1| SIX3 protein [Homo sapiens]
          Length = 180

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 83/99 (83%), Gaps = 4/99 (4%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 82  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 141

Query: 270 RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKL 308
            GNF+DLY ILE+H+F+  +H KLQA+WL+AHY EAEKL
Sbjct: 142 TGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKL 180


>gi|170574100|ref|XP_001892670.1| Homeobox domain containing protein [Brugia malayi]
 gi|170594957|ref|XP_001902189.1| Homeobox domain containing protein [Brugia malayi]
 gi|158590265|gb|EDP28962.1| Homeobox domain containing protein [Brugia malayi]
 gi|158601634|gb|EDP38496.1| Homeobox domain containing protein [Brugia malayi]
          Length = 237

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 26/200 (13%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK----NESVLKAKAMVAFHRGNFK 274
           F+ +Q+ C+CE L Q+ +  +L      +      ++    + SVL+A     ++   ++
Sbjct: 20  FSSDQIDCICEALYQARDGAKLLELFEPIANNIMFYRCRYYSSSVLRAYLYALYYGKRYE 79

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 334
           +L++ + S+ F    + +LQ LW KA Y E E+ R + LGAV KYR+R+K P PR+IWDG
Sbjct: 80  ELFQTIASNTFEQRFYNELQDLWYKARYAENEERRQKELGAVEKYRLRKKHPPPRSIWDG 139

Query: 335 EETSYCFKEKSRS----------------------VLRDWYTHNPYPSPREKRELAEATG 372
           +ET Y FKE +R                       +LR +Y  N YP+  +K+E+A  T 
Sbjct: 140 QETIYSFKENARKLWLTDLLSQEKNASDNIQFAIIILRQFYRKNKYPTLEDKKEIARITD 199

Query: 373 LTTTQVSNWFKNRRQRDRAA 392
           L   Q+SNWFKNRRQRD+++
Sbjct: 200 LKIIQISNWFKNRRQRDKSS 219



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 25/110 (22%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRS----------------------VLRDWYTH 165
           KYR+R+K P PR+IWDG+ET Y FKE +R                       +LR +Y  
Sbjct: 123 KYRLRKKHPPPRSIWDGQETIYSFKENARKLWLTDLLSQEKNASDNIQFAIIILRQFYRK 182

Query: 166 NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILP 215
           N YP+  +K+E+A  T L   Q+SNWF +       + S+ST   S  +P
Sbjct: 183 NKYPTLEDKKEIARITDLKIIQISNWFKN---RRQRDKSSSTGQFSSGVP 229


>gi|312382871|gb|EFR28167.1| hypothetical protein AND_04223 [Anopheles darlingi]
          Length = 244

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 79/122 (64%), Gaps = 35/122 (28%)

Query: 214 LPSFGFTQEQVAC------------VCEV-----------------------LQQSGNIE 238
           LPSFGFTQEQVA              C +                       LQQ+GN+E
Sbjct: 96  LPSFGFTQEQVAVRILLPDDAGAWLTCRLDEHFVDFAFTSTVSHSPVSSSPVLQQAGNVE 155

Query: 239 RLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWL 298
           RLGRFLWSLP C+KL  +ESVLKAKA+VAFHRGNFK+LYR+LE HQ+SPHNH KLQALWL
Sbjct: 156 RLGRFLWSLPQCDKLQLHESVLKAKAVVAFHRGNFKELYRLLEHHQYSPHNHAKLQALWL 215

Query: 299 KA 300
           KA
Sbjct: 216 KA 217


>gi|268559692|ref|XP_002637837.1| C. briggsae CBR-UNC-39 protein [Caenorhabditis briggsae]
          Length = 325

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 114/214 (53%), Gaps = 25/214 (11%)

Query: 201 PNTSTSTASISPI-LPSFGFTQEQVACVCEVLQQSGNIERLGRF------LWSLPACEKL 253
           P  S ST SI+    P   +  +Q+  +C  L Q+ + ERL  F      ++   A +  
Sbjct: 74  PTPSPSTTSIATFGFPMAEYNLDQMEAICTSLFQARDGERLVAFFNQMKEMYGSNALDHF 133

Query: 254 HKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPL 313
             +ES++ A     +H  +F+ L+ +L +  F       LQ +W  A Y E++  RG+ L
Sbjct: 134 -GSESIVVAYTYALYHSNDFERLFHLLSTRHFHATFFADLQEIWHYARYKESQLKRGKEL 192

Query: 314 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATG 372
             V KYR+RRKFP P+TIWDGEET Y FK+ SR  L+ ++   N YP+  +KRE++ ATG
Sbjct: 193 NPVEKYRLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFNDVNQYPNQEQKREISRATG 252

Query: 373 LTTTQV----------------SNWFKNRRQRDR 390
           L   QV                SNWFKNRRQRD+
Sbjct: 253 LKVVQVCTLRISPHIQVSKFQISNWFKNRRQRDK 286



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           KYR+RRKFP P+TIWDGEET Y FK+ SR  L+ ++   N YP+  +KRE++ ATGL   
Sbjct: 197 KYRLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFNDVNQYPNQEQKREISRATGLKVV 256

Query: 187 QV 188
           QV
Sbjct: 257 QV 258


>gi|5106952|gb|AAD39904.1|AF108819_1 homeobox protein SIX2, partial [Danio rerio]
          Length = 63

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/63 (98%), Positives = 63/63 (100%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWFK
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/59 (98%), Positives = 59/59 (100%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WYTHNPYPSPREKRELAEATGLTTTQVSNWF
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWF 59


>gi|397493526|ref|XP_003817655.1| PREDICTED: homeobox protein SIX5, partial [Pan paniscus]
          Length = 830

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/88 (71%), Positives = 72/88 (81%), Gaps = 1/88 (1%)

Query: 304 EAEKL-RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPR 362
           EAE+  RGR LGAV KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P 
Sbjct: 261 EAERAARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPD 320

Query: 363 EKRELAEATGLTTTQVSNWFKNRRQRDR 390
           EKR LA  TGL+ TQVSNWFKNRRQRDR
Sbjct: 321 EKRRLATLTGLSLTQVSNWFKNRRQRDR 348



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 274 VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 333

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 334 TQVSNWF 340


>gi|5106948|gb|AAD39902.1|AF108817_1 homeobox protein SIX2, partial [Squalus acanthias]
          Length = 63

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/63 (96%), Positives = 62/63 (98%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWFK
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WY HNPYPSPREKRELAEATGLTTTQVSNWF
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWF 59


>gi|417411853|gb|JAA52348.1| Putative transcription factor six, partial [Desmodus rotundus]
          Length = 597

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 77/98 (78%)

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
           ++ VL+A+A+VAF RG + +LYR++ES  F   +H  LQ L+L+A Y EAE+ RGR LGA
Sbjct: 1   SDPVLRARALVAFQRGEYAELYRLIESRPFPAAHHAFLQDLYLRARYHEAERARGRALGA 60

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 353
           V KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y
Sbjct: 61  VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACY 98



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 33/38 (86%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY 163
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y
Sbjct: 61  VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACY 98


>gi|354467657|ref|XP_003496285.1| PREDICTED: hypothetical protein LOC100766763 [Cricetulus griseus]
          Length = 353

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 68/76 (89%)

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA
Sbjct: 265 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELA 324

Query: 369 EATGLTTTQVSNWFKN 384
           +ATGLT TQV NWFKN
Sbjct: 325 QATGLTPTQVGNWFKN 340



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 272 VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 331

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 332 TQVGNWF 338


>gi|5106940|gb|AAD39898.1|AF108813_1 homeobox protein SIX2, partial [Petromyzon marinus]
          Length = 63

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/63 (95%), Positives = 62/63 (98%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSRS+LR+WY HNPYPSPREKRELAEATGLTTTQVSNWFK
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSILREWYAHNPYPSPREKRELAEATGLTTTQVSNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/59 (94%), Positives = 58/59 (98%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           KFPLPRTIWDGEETSYCFKEKSRS+LR+WY HNPYPSPREKRELAEATGLTTTQVSNWF
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSILREWYAHNPYPSPREKRELAEATGLTTTQVSNWF 59


>gi|308220132|gb|ADO22638.1| SIX class homeobox transcription factor SIX32c [Mnemiopsis leidyi]
          Length = 244

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 40/174 (22%)

Query: 224 VACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESH 283
           V  V E+++ +GN+E+L   +WSLP    L ++E++ +A   VAF+              
Sbjct: 92  VGKVSELME-AGNMEKLVELVWSLPPPSPL-EDETIFRAHVYVAFY-------------- 135

Query: 284 QFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 343
                             Y+++  LR         YR+R+KFP P TIWDG+ TSYCFK+
Sbjct: 136 ---------------TRQYLQSAHLR---------YRLRKKFPFPPTIWDGDNTSYCFKD 171

Query: 344 KSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           +SRS L D+Y  N YP+P EK+E++  +GL+ TQVSNWFKNRRQRDR  +++ G
Sbjct: 172 RSRSYLVDFYVTNKYPTPAEKKEISSRSGLSVTQVSNWFKNRRQRDRMTQKQMG 225



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 54/66 (81%)

Query: 127 IKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 186
           ++YR+R+KFP P TIWDG+ TSYCFK++SRS L D+Y  N YP+P EK+E++  +GL+ T
Sbjct: 145 LRYRLRKKFPFPPTIWDGDNTSYCFKDRSRSYLVDFYVTNKYPTPAEKKEISSRSGLSVT 204

Query: 187 QVSNWF 192
           QVSNWF
Sbjct: 205 QVSNWF 210


>gi|395508122|ref|XP_003758363.1| PREDICTED: homeobox protein SIX3, partial [Sarcophilus harrisii]
          Length = 151

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 67/75 (89%)

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAE 369
           GRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+
Sbjct: 1   GRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQ 60

Query: 370 ATGLTTTQVSNWFKN 384
           ATGLT TQV NWFKN
Sbjct: 61  ATGLTPTQVGNWFKN 75



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT 
Sbjct: 7   VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTP 66

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 67  TQVGNWF 73


>gi|402241357|gb|AFQ40459.1| optix, partial [Heliconius melpomene thelxiopeia]
 gi|402241359|gb|AFQ40460.1| optix, partial [Heliconius melpomene thelxiopeia]
          Length = 117

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 67/76 (88%)

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELA 368
           RGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA
Sbjct: 1   RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELA 60

Query: 369 EATGLTTTQVSNWFKN 384
            ATGLT TQV NWFKN
Sbjct: 61  AATGLTPTQVGNWFKN 76



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 59/67 (88%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYRVR+KFPLPRTIWDGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA ATGLT 
Sbjct: 8   VDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTP 67

Query: 186 TQVSNWF 192
           TQV NWF
Sbjct: 68  TQVGNWF 74


>gi|440902307|gb|ELR53114.1| Homeobox protein SIX5, partial [Bos grunniens mutus]
          Length = 558

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 64/77 (83%)

Query: 314 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGL 373
           GAV KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL
Sbjct: 1   GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL 60

Query: 374 TTTQVSNWFKNRRQRDR 390
           + TQVSNWFKNRRQRDR
Sbjct: 61  SLTQVSNWFKNRRQRDR 77



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 3   VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 62

Query: 186 TQVSNWF 192
           TQVSNWF
Sbjct: 63  TQVSNWF 69


>gi|444730753|gb|ELW71127.1| Homeobox protein SIX5 [Tupaia chinensis]
          Length = 596

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/75 (72%), Positives = 62/75 (82%)

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 375
           V KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P EKR LA  TGL+ 
Sbjct: 43  VDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSL 102

Query: 376 TQVSNWFKNRRQRDR 390
           TQVSNWFKNRRQRDR
Sbjct: 103 TQVSNWFKNRRQRDR 117



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 4/79 (5%)

Query: 114 VKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPRE 173
           ++T Q++     + KYR+R+KFPLP+TIWDGEET YCFKE+SR+ L+  Y  N YP+P E
Sbjct: 35  LQTLQAA----EVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDE 90

Query: 174 KRELAEATGLTTTQVSNWF 192
           KR LA  TGL+ TQVSNWF
Sbjct: 91  KRRLATLTGLSLTQVSNWF 109


>gi|1255628|dbj|BAA08916.1| AREC3 [Mus musculus]
          Length = 327

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 66/91 (72%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 105 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 164

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEA 305
           +LY ILESH F   NHP LQ LW KA Y EA
Sbjct: 165 ELYSILESHSFESANHPLLQQLWYKARYTEA 195


>gi|308220120|gb|ADO22632.1| SIX class homeobox transcription factor SIX13a [Mnemiopsis leidyi]
          Length = 342

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 171 PREKRELAEATGLTTTQVSNWFSSAN--ITSSPNTSTSTASISPILPSFGFTQEQVACVC 228
           P + R   +       Q   W S  +  + S+   S+   S +PI       QEQ+    
Sbjct: 107 PPDNRTFRDDMFGQNAQFDVWGSVKDEPVDSTEGQSSCVYSNNPIKSEKTVPQEQIRLHN 166

Query: 229 EVLQQSGNIERLGRFLWSLPAC---EKLHKN---ESVLKAKAMVAFHRGNFKDLYRILES 282
            +  Q  N  ++ +F +  PA    +  + N   E+ L  +   A  + + K +  ++ +
Sbjct: 167 TLTDQKEN--QIPQFTYHGPAPLTEQNFNYNQQREAALVDQIQEAHLQADHKRVMEMIAT 224

Query: 283 HQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           + FS  +H  LQ LWL A Y  A+  RG+   AV +YR+R+K+P P T+WDGE T YC+K
Sbjct: 225 NCFSSTHHDMLQELWLSAVYGFAKSRRGKAPNAVDRYRLRKKYPFPATVWDGERTLYCYK 284

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           + +R  L ++Y  N YP+P EK+EL+E   LT  QV NWFKN+R R +
Sbjct: 285 QSARDQLEEFYQQNKYPTPLEKKELSERCDLTYMQVCNWFKNKRMRGK 332



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 12/117 (10%)

Query: 93  ASHKSIFDKVVTS---------YKEVWKSPVKTYQSS---SIIINIIKYRVRRKFPLPRT 140
           A HK + + + T+          +E+W S V  +  S        + +YR+R+K+P P T
Sbjct: 213 ADHKRVMEMIATNCFSSTHHDMLQELWLSAVYGFAKSRRGKAPNAVDRYRLRKKYPFPAT 272

Query: 141 IWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           +WDGE T YC+K+ +R  L ++Y  N YP+P EK+EL+E   LT  QV NWF +  +
Sbjct: 273 VWDGERTLYCYKQSARDQLEEFYQQNKYPTPLEKKELSERCDLTYMQVCNWFKNKRM 329


>gi|5106954|gb|AAD39905.1|AF108820_1 homeobox protein SIX9, partial [Danio rerio]
          Length = 63

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WY   PYPSPREKR+LA ATGLT TQVSNWFK
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYCRKPYPSPREKRDLAAATGLTATQVSNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/59 (88%), Positives = 54/59 (91%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           KFPLPRTIWDGEETSYCFKEKSRSVLR+WY   PYPSPREKR+LA ATGLT TQVSNWF
Sbjct: 1   KFPLPRTIWDGEETSYCFKEKSRSVLREWYCRKPYPSPREKRDLAAATGLTATQVSNWF 59


>gi|82621637|gb|ABB86490.1| SIX1/2-SINE class homeobox protein, partial [Nematostella
           vectensis]
 gi|110339165|gb|ABG67846.1| SIX12A, partial [Nematostella vectensis]
          Length = 60

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 59/60 (98%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQVSNWFKNRRQRDRAAE
Sbjct: 1   GEETSYCFKEKSRNILREWYSHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDRAAE 60



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 48/49 (97%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           GEETSYCFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQVSNWF
Sbjct: 1   GEETSYCFKEKSRNILREWYSHNPYPSPREKRELAEGTGLTTTQVSNWF 49


>gi|308220158|gb|ADO22651.1| SIX class homeobox transcription factor SIX13f [Mnemiopsis leidyi]
          Length = 144

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 88/136 (64%)

Query: 257 ESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAV 316
           ++ L  +A  A++R N +++  IL SH F   +H +LQ LWL A Y    + + + L AV
Sbjct: 5   DNTLILQAEEAYNRRNHENVLEILSSHFFHKSHHEQLQHLWLAAVYARESETKKKNLTAV 64

Query: 317 GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 376
            +YR+R++ P P +IW+GE+T YC K+ +R  L  ++  NPYP+P EKR LA +  L+  
Sbjct: 65  DRYRLRKRNPFPASIWEGEKTIYCLKKSARDSLTSFFEKNPYPTPAEKRRLATSCELSYV 124

Query: 377 QVSNWFKNRRQRDRAA 392
           Q+SNWFKN+R R++ +
Sbjct: 125 QISNWFKNKRMREKES 140



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 3/92 (3%)

Query: 109 VWKSPVKTYQSSSIIINII---KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH 165
           +W + V   +S +   N+    +YR+R++ P P +IW+GE+T YC K+ +R  L  ++  
Sbjct: 44  LWLAAVYARESETKKKNLTAVDRYRLRKRNPFPASIWEGEKTIYCLKKSARDSLTSFFEK 103

Query: 166 NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           NPYP+P EKR LA +  L+  Q+SNWF +  +
Sbjct: 104 NPYPTPAEKRRLATSCELSYVQISNWFKNKRM 135


>gi|308220130|gb|ADO22637.1| SIX class homeobox transcription factor SIX32a [Mnemiopsis leidyi]
          Length = 733

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 107/206 (51%), Gaps = 13/206 (6%)

Query: 196 NITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP-ACEKLH 254
           N+ S P    S   + P   +   TQ        V Q  GN+E L +F+ S+P A   + 
Sbjct: 246 NMPSVPADCCSFHEVFPQPANISRTQLNYVLKQVVSQTKGNVENLAKFIDSIPPALSGV- 304

Query: 255 KNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
             E +L  KAMV F + N  ++ RILES +F       LQ LW    Y   E+ +GR LG
Sbjct: 305 -TEYLLAVKAMVNFKQKNTMEVIRILESTKFREIPWEPLQRLWYAVQYEHEERFKGRKLG 363

Query: 315 AVGKYRVRRKFPLPRTIWDGEETSYC--------FKEKSRSVLRDWYTHNPYPSPREKRE 366
           AV KYRVR+K+PLP +I D  E+  C        F  K R +L D Y    +P    K  
Sbjct: 364 AVDKYRVRKKWPLPPSISD--ESGTCLFGSNRDSFTPKVRRILWDHYHLEKFPDNALKIL 421

Query: 367 LAEATGLTTTQVSNWFKNRRQRDRAA 392
           +A+ +GLT  QV+NWFKNRRQRDR A
Sbjct: 422 IAKRSGLTFHQVNNWFKNRRQRDRLA 447



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYC--------FKEKSRSVLRDWYTHNPYPSPREKREL 177
           + KYRVR+K+PLP +I D  E+  C        F  K R +L D Y    +P    K  +
Sbjct: 365 VDKYRVRKKWPLPPSISD--ESGTCLFGSNRDSFTPKVRRILWDHYHLEKFPDNALKILI 422

Query: 178 AEATGLTTTQVSNWFSS 194
           A+ +GLT  QV+NWF +
Sbjct: 423 AKRSGLTFHQVNNWFKN 439


>gi|308220186|gb|ADO22665.1| SIX class homeobox transcription factor SIX32b [Mnemiopsis leidyi]
          Length = 747

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 12/221 (5%)

Query: 196 NITSSPNTSTSTASISPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHK 255
           N+ S P    S   + P   +   TQ        V Q  GN+E L +F+ S+P       
Sbjct: 177 NMPSVPADCCSFHEVFPQPANISRTQLNYVLKQVVSQTKGNVENLAKFIDSIPPALS-GV 235

Query: 256 NESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGA 315
            E +L  KAMV F + N  ++ RILES +F       LQ LW    Y   E+ +GR LGA
Sbjct: 236 TEYLLAVKAMVNFKQKNTMEVIRILESTKFREIPWEPLQRLWYAVQYEHEERFKGRKLGA 295

Query: 316 VGKYRVRRKFPLPRTIWDGEETSYC--------FKEKSRSVLRDWYTHNPYPSPREKREL 367
           V KYRVR+K+PLP +I D  E+  C        F  K R +L D Y    +P    K  +
Sbjct: 296 VDKYRVRKKWPLPPSISD--ESGTCLFGSNRDSFTPKVRRILWDHYHLEKFPDNALKILI 353

Query: 368 AEATGLTTTQVSNWFKNRRQRDRAAEQKDGS-VHSFRVNIG 407
           A+ +GLT  QV+NWFKNRRQRD   + +  S ++    N+G
Sbjct: 354 AKRSGLTFHQVNNWFKNRRQRDSCLDTRTQSTINVVLSNVG 394



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYC--------FKEKSRSVLRDWYTHNPYPSPREKREL 177
           + KYRVR+K+PLP +I D  E+  C        F  K R +L D Y    +P    K  +
Sbjct: 296 VDKYRVRKKWPLPPSISD--ESGTCLFGSNRDSFTPKVRRILWDHYHLEKFPDNALKILI 353

Query: 178 AEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQ 221
           A+ +GLT  QV+NWF +     S   + + ++I+ +L + GF +
Sbjct: 354 AKRSGLTFHQVNNWFKNRRQRDSCLDTRTQSTINVVLSNVGFVR 397


>gi|354502104|ref|XP_003513127.1| PREDICTED: homeobox protein SIX4 [Cricetulus griseus]
          Length = 750

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 51/85 (60%), Positives = 62/85 (72%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 97  PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query: 275 DLYRILESHQFSPHNHPKLQALWLK 299
           +LY ILESH F   NHP LQ LW K
Sbjct: 157 ELYSILESHSFESANHPLLQQLWYK 181


>gi|308500526|ref|XP_003112448.1| hypothetical protein CRE_30662 [Caenorhabditis remanei]
 gi|308267016|gb|EFP10969.1| hypothetical protein CRE_30662 [Caenorhabditis remanei]
          Length = 207

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 10/175 (5%)

Query: 223 QVACVCEVLQQSGNIERLGRF------LWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
           Q+  +C  L Q+ + ERL RF      ++ + + E+   +E ++ A A   FH  NF  L
Sbjct: 3   QMEVICTSLFQTRDGERLVRFFDQVESVYGVNSLERF-GSEPMVVAYAYALFHSNNFTKL 61

Query: 277 YRILESHQFSPHNHPKLQALWLKAHYVEAEKLR--GRPLGAVGKYRVRRKFPLPRTIWDG 334
           Y +L +  F       L  +W +A Y EA+  R  G  L AV ++R+R++  LP TIWDG
Sbjct: 62  YNLLSTRNFDKKYFDDLTKIWYEAKYKEAQLNRKSGEELTAVERHRLRKRTELPSTIWDG 121

Query: 335 EETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E+T Y FK+ SR  LR ++      P+  +++EL+  TGL   Q+SNWFKNRRQR
Sbjct: 122 EKTVYSFKDSSRRYLRKFFKEVTRKPNQEQRKELSRVTGLKLIQISNWFKNRRQR 176



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 96  KSIFDKVVTSYKEV-WKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEK 154
           K  FD +   + E  +K      +S   +  + ++R+R++  LP TIWDGE+T Y FK+ 
Sbjct: 72  KKYFDDLTKIWYEAKYKEAQLNRKSGEELTAVERHRLRKRTELPSTIWDGEKTVYSFKDS 131

Query: 155 SRSVLRDWYTH-NPYPSPREKRELAEATGLTTTQVSNWFSS 194
           SR  LR ++      P+  +++EL+  TGL   Q+SNWF +
Sbjct: 132 SRRYLRKFFKEVTRKPNQEQRKELSRVTGLKLIQISNWFKN 172


>gi|308500538|ref|XP_003112454.1| CRE-UNC-39 protein [Caenorhabditis remanei]
 gi|308267022|gb|EFP10975.1| CRE-UNC-39 protein [Caenorhabditis remanei]
          Length = 374

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 98/211 (46%), Gaps = 38/211 (18%)

Query: 221 QEQVACVCEVLQQSGNIERLGRFLWSLPACE---------------------KLHKNESV 259
           Q Q+  +C  L Q+ + ERL  F   L                         K+      
Sbjct: 122 QFQMEAICTSLFQARDGERLVAFFNQLKTVYGSNALDHFGSEAIVVGEESPVKMELRVDD 181

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKY 319
           L A     +H  +F+ L+ +L +  F       LQ +W  A Y E++  RG+ L  V KY
Sbjct: 182 LYAYTYALYHSNDFERLFHLLSTRHFQQIYFTDLQEIWHYARYKESQLKRGKELNPVEKY 241

Query: 320 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTTQV 378
           R+RRKFP P+TIWDGEET Y FK+ SR  L+ ++     YPS  +KR+++  T L   QV
Sbjct: 242 RLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFQDVTQYPSQEQKRDISRVTKLKVVQV 301

Query: 379 ----------------SNWFKNRRQRDRAAE 393
                           SNWFKNRRQRD+  +
Sbjct: 302 RLIDFDIRISPIFFQISNWFKNRRQRDKTDQ 332



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           KYR+RRKFP P+TIWDGEET Y FK+ SR  L+ ++     YPS  +KR+++  T L   
Sbjct: 240 KYRLRRKFPPPKTIWDGEETVYSFKDSSRKYLKKFFQDVTQYPSQEQKRDISRVTKLKVV 299

Query: 187 QV 188
           QV
Sbjct: 300 QV 301


>gi|308220124|gb|ADO22634.1| SIX class homeobox transcription factor SIX13c [Mnemiopsis leidyi]
          Length = 1047

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 5/146 (3%)

Query: 249  ACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEK 307
              + + +N +++ A+ ++A   G F +    + SH   P   H + Q +WL+  Y  A K
Sbjct: 879  VLDLIAENSALITARELLA--DGLFNETLDFI-SHTDQPERLHEQFQEIWLETIYQRASK 935

Query: 308  LR-GRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRE 366
             R G+ L AV +YR+R++ P P TIW+G+   + FKE SRSVL+D+Y  NPYPSP EKRE
Sbjct: 936  QRKGKNLNAVDRYRLRKRHPYPSTIWNGDVARHLFKESSRSVLQDFYERNPYPSPEEKRE 995

Query: 367  LAEATGLTTTQVSNWFKNRRQRDRAA 392
            LA    L+  QVSN+FKN+R R + +
Sbjct: 996  LARQAKLSYCQVSNFFKNKRGRQKVS 1021



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 8/105 (7%)

Query: 94   SHKSIFDKVVTSYKEVWKSPVKTYQSSSI------IINIIKYRVRRKFPLPRTIWDGEET 147
            SH    +++   ++E+W   +  YQ +S       +  + +YR+R++ P P TIW+G+  
Sbjct: 909  SHTDQPERLHEQFQEIWLETI--YQRASKQRKGKNLNAVDRYRLRKRHPYPSTIWNGDVA 966

Query: 148  SYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
             + FKE SRSVL+D+Y  NPYPSP EKRELA    L+  QVSN+F
Sbjct: 967  RHLFKESSRSVLQDFYERNPYPSPEEKRELARQAKLSYCQVSNFF 1011


>gi|198421420|ref|XP_002122878.1| PREDICTED: similar to transcription factor protein, partial [Ciona
           intestinalis]
          Length = 241

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 55/60 (91%), Gaps = 2/60 (3%)

Query: 341 FKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK--DGS 398
           F+EKSR+VLRDWYTHNPYPSPREKRELAE TGLT TQVSNWFKNRRQRDRAAE K  DGS
Sbjct: 1   FQEKSRAVLRDWYTHNPYPSPREKRELAEGTGLTVTQVSNWFKNRRQRDRAAEAKERDGS 60



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/42 (90%), Positives = 40/42 (95%)

Query: 151 FKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           F+EKSR+VLRDWYTHNPYPSPREKRELAE TGLT TQVSNWF
Sbjct: 1   FQEKSRAVLRDWYTHNPYPSPREKRELAEGTGLTVTQVSNWF 42


>gi|313242075|emb|CBY34253.1| unnamed protein product [Oikopleura dioica]
          Length = 170

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 4/108 (3%)

Query: 211 SPILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMV 266
           +P+     F  + V  +C  L+  G+I+RLG++LWSLPA     E L KNE +++A+A+V
Sbjct: 62  TPLPAQQSFAVQHVINICSTLEDCGDIDRLGQYLWSLPALPAILEALSKNEFLIRARAVV 121

Query: 267 AFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLG 314
           AF +GN+++LY ++ES +FS  +H KLQALWL+AHY EAE  RGRPLG
Sbjct: 122 AFKQGNYRELYALIESRRFSNIHHAKLQALWLEAHYGEAEAARGRPLG 169


>gi|344256035|gb|EGW12139.1| Homeobox protein SIX4 [Cricetulus griseus]
          Length = 673

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 60/82 (73%)

Query: 215 PSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFK 274
           P   F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + 
Sbjct: 97  PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query: 275 DLYRILESHQFSPHNHPKLQAL 296
           +LY ILESH F   NHP LQ L
Sbjct: 157 ELYSILESHSFESANHPLLQQL 178


>gi|7363059|emb|CAB83141.1| human homeobox protein SIX3 (NP_005404) [Homo sapiens]
          Length = 164

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 68/83 (81%), Gaps = 4/83 (4%)

Query: 214 LPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLP----ACEKLHKNESVLKAKAMVAFH 269
           LP+  F+ EQVA VCE L+++G+IERLGRFLWSLP    ACE ++K+ES+L+A+A+VAFH
Sbjct: 82  LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFH 141

Query: 270 RGNFKDLYRILESHQFSPHNHPK 292
            GNF+DLY ILE+H+F+  +H K
Sbjct: 142 TGNFRDLYHILENHKFTKESHGK 164


>gi|402230890|emb|CCG27803.1| sine oculis homeobox homolog 3/6 protein, partial [Botryllus
           schlosseri]
          Length = 93

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHN-HPKLQALWLKAHYVEAEKL 308
            E LH N+S+L+A+A+VA+H GN++++Y IL+ H F   + H  LQ++W++AHY++AE+ 
Sbjct: 7   TEALHSNDSLLRARAIVAYHHGNYREVYNILQHHSFRDTSWHHTLQSIWMEAHYLDAERS 66

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGE 335
           +GRPLG V KYR+R++FPLPR+IW+GE
Sbjct: 67  KGRPLGPVEKYRIRKRFPLPRSIWNGE 93


>gi|426377096|ref|XP_004055312.1| PREDICTED: homeobox protein SIX4 [Gorilla gorilla gorilla]
          Length = 1083

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 57/77 (74%)

Query: 217 FGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDL 276
             F+ + VACVCE LQQ GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +L
Sbjct: 98  LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 157

Query: 277 YRILESHQFSPHNHPKL 293
           Y ILESH F   NHP L
Sbjct: 158 YSILESHSFESANHPLL 174


>gi|5106946|gb|AAD39901.1|AF108816_1 homeobox protein SIX12, partial [Petromyzon marinus]
          Length = 63

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 57/63 (90%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT TQV NWFK
Sbjct: 1   KFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 54/61 (88%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFS 193
           KFPLPRTIWDGE+ ++CFKE++R++LR+WY  +PYP+P +KRELA+ATGLT TQV NWF 
Sbjct: 1   KFPLPRTIWDGEQKTHCFKERTRNLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFK 60

Query: 194 S 194
           +
Sbjct: 61  N 61


>gi|355778646|gb|EHH63682.1| hypothetical protein EGM_16696 [Macaca fascicularis]
          Length = 175

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/52 (90%), Positives = 50/52 (96%)

Query: 213 ILPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKA 264
           +LPSFGFTQEQVACVCEVLQQ GN+ERLGRFLWSLPAC+ LHKNESVLKAKA
Sbjct: 3   MLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKA 54



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 22/23 (95%)

Query: 374 TTTQVSNWFKNRRQRDRAAEQKD 396
           TTTQVSNWFKNRRQRDRAAE K+
Sbjct: 55  TTTQVSNWFKNRRQRDRAAEAKE 77


>gi|5106942|gb|AAD39899.1|AF108814_1 homeobox protein SIX4, partial [Petromyzon marinus]
          Length = 63

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 51/63 (80%)

Query: 324 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFK 383
           KFPLPRTIWDGEET YCFKEKSR+ L+D Y    YP+P EKR LA+ TGL+  QVSNWFK
Sbjct: 1   KFPLPRTIWDGEETVYCFKEKSRNFLKDCYRRTRYPAPDEKRRLAKLTGLSVVQVSNWFK 60

Query: 384 NRR 386
           NRR
Sbjct: 61  NRR 63



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 48/61 (78%)

Query: 134 KFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFS 193
           KFPLPRTIWDGEET YCFKEKSR+ L+D Y    YP+P EKR LA+ TGL+  QVSNWF 
Sbjct: 1   KFPLPRTIWDGEETVYCFKEKSRNFLKDCYRRTRYPAPDEKRRLAKLTGLSVVQVSNWFK 60

Query: 194 S 194
           +
Sbjct: 61  N 61


>gi|308220126|gb|ADO22635.1| SIX class homeobox transcription factor SIX13d [Mnemiopsis leidyi]
          Length = 900

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)

Query: 212 PILPSFGFTQEQVACVC------------EVLQQSGNIERLGRFLWSLPACEKLHKNESV 259
           P  P  G  +E +   C            E L     + +L R L+   +  +LHKN  +
Sbjct: 627 PSSPEIGTYEESIPGSCYHGYSTPRYTPAEQLSPPTEVSQLQRNLYQTNS--ELHKNCMI 684

Query: 260 LKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEK---LRGRPLGAV 316
               A      G F   +  + + +F   ++  +Q LWL   Y +       +  PL AV
Sbjct: 685 ----AQFLASSGQFAKFFEFVTTSEFREQDNTGVQQLWLHCLYTQQSSDAASKKTPLTAV 740

Query: 317 GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 376
            ++R+R+++P P +IW+GE TSY  K+ +R +L   ++ + YPS  EK+ LA+   +   
Sbjct: 741 DRHRLRKRYPYPASIWNGETTSYNLKQSARRLLAIAFSVDQYPSNEEKKHLADVCEMDYL 800

Query: 377 QVSNWFKNRRQRDRAAEQKDGSVHSFRVNIG 407
           Q+ NWFKNRR R++  +++  S  + RV  G
Sbjct: 801 QICNWFKNRRMREKMVQRRTNSDGAGRVAAG 831



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)

Query: 104 TSYKEVWKSPVKTYQSSSI------IINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRS 157
           T  +++W   + T QSS        +  + ++R+R+++P P +IW+GE TSY  K+ +R 
Sbjct: 712 TGVQQLWLHCLYTQQSSDAASKKTPLTAVDRHRLRKRYPYPASIWNGETTSYNLKQSARR 771

Query: 158 VLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L   ++ + YPS  EK+ LA+   +   Q+ NWF
Sbjct: 772 LLAIAFSVDQYPSNEEKKHLADVCEMDYLQICNWF 806


>gi|402578101|gb|EJW72056.1| homeobox domain-containing protein, partial [Wuchereria bancrofti]
          Length = 115

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 9/96 (9%)

Query: 306 EKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR---------SVLRDWYTHN 356
           E+ R + LGAV KYR+R+K P PR+IWDG+ET Y FKE +R          +LR +Y  N
Sbjct: 2   EERRQKELGAVEKYRLRKKHPPPRSIWDGQETIYSFKENARKLWLTDLLVKILRQFYRKN 61

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
            YP+  +K+E+A  T L   Q+SNWFKNRRQRD+ +
Sbjct: 62  KYPTLEDKKEIARITDLKIIQISNWFKNRRQRDKGS 97



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 9/95 (9%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSR---------SVLRDWYTHNPYPSPREKRELA 178
           KYR+R+K P PR+IWDG+ET Y FKE +R          +LR +Y  N YP+  +K+E+A
Sbjct: 14  KYRLRKKHPPPRSIWDGQETIYSFKENARKLWLTDLLVKILRQFYRKNKYPTLEDKKEIA 73

Query: 179 EATGLTTTQVSNWFSSANITSSPNTSTSTASISPI 213
             T L   Q+SNWF +       +++   +S  PI
Sbjct: 74  RITDLKIIQISNWFKNRRQRDKGSSTGQFSSGVPI 108


>gi|351713871|gb|EHB16790.1| Homeobox protein SIX4 [Heterocephalus glaber]
          Length = 759

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 45/51 (88%)

Query: 296 LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR 346
           LW KA Y EAE+ RGRPLGAV KYR+RRKFPLPRTIWDGEET YCFKEKS+
Sbjct: 153 LWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSQ 203



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)

Query: 221 QEQVACVCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRIL 280
           +E V C  E   Q GN++RL RFLWSLP  + L  NES+LKA+A+VAFH+G + +LY IL
Sbjct: 192 EETVYCFKEK-SQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSIL 250

Query: 281 ESHQFSPHNHPKLQAL 296
           ESH F   NHP LQ L
Sbjct: 251 ESHIFESANHPLLQQL 266



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 29/31 (93%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSR 156
           + KYR+RRKFPLPRTIWDGEET YCFKEKS+
Sbjct: 173 VDKYRLRRKFPLPRTIWDGEETVYCFKEKSQ 203


>gi|348020121|gb|AEP44002.1| sine oculis-like transcription factor [Craspedacusta sowerbyi]
          Length = 422

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 6/176 (3%)

Query: 227 VCEVLQQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFS 286
           VC +L Q+ + + L  FL  LP      ++E +L+AK  +A  +G+   +YR+++   F 
Sbjct: 69  VCSLLLQTNSFDALAIFLDRLPDKNVYRQDEIILRAKVHLALRQGDTTAVYRLIKDGSFV 128

Query: 287 PHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW-DGEETSYCFKEKS 345
             +   L  +W  A Y++ E+  G+PL  + ++R+R++ P P +I   G   +     ++
Sbjct: 129 --DGEDLIKVWDDALYMDEERRLGKPLTPLIRFRLRKRNPPPSSICPQGARRTNSLPREA 186

Query: 346 RSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
            SVL+ W   +  +PYPS  EK+ELA  +GL+  QV  WF N R+R +  E +  S
Sbjct: 187 TSVLKSWLHCHAADPYPSALEKQELARLSGLSGGQVKTWFANARRRSKKVELRGAS 242



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 4/74 (5%)

Query: 126 IIKYRVRRKFPLPRTIW-DGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEAT 181
           +I++R+R++ P P +I   G   +     ++ SVL+ W   +  +PYPS  EK+ELA  +
Sbjct: 156 LIRFRLRKRNPPPSSICPQGARRTNSLPREATSVLKSWLHCHAADPYPSALEKQELARLS 215

Query: 182 GLTTTQVSNWFSSA 195
           GL+  QV  WF++A
Sbjct: 216 GLSGGQVKTWFANA 229


>gi|82621573|gb|ABB86458.1| SIX3/6-SINE class homeobox protein, partial [Nematostella
           vectensis]
 gi|110339169|gb|ABG67848.1| SIX36, partial [Nematostella vectensis]
          Length = 60

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 53/59 (89%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           GE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWFKNRRQRDRAA
Sbjct: 1   GEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKNRRQRDRAA 59



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 44/51 (86%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           GE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGLT TQV NWF +
Sbjct: 1   GEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAQATGLTPTQVGNWFKN 51


>gi|3513526|gb|AAC33852.1| Optix [Drosophila melanogaster]
          Length = 60

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 53/60 (88%)

Query: 333 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           DGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWFKNRRQRDRAA
Sbjct: 1   DGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQRDRAA 60



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 44/52 (84%)

Query: 143 DGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           DGE+ ++CFKE++RS+LR+WY  +PYP+P +KRELA+ATGL  TQV NWF +
Sbjct: 1   DGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKN 52


>gi|312086991|ref|XP_003145294.1| hypothetical protein LOAG_09719 [Loa loa]
 gi|307759542|gb|EFO18776.1| hypothetical protein LOAG_09719 [Loa loa]
          Length = 153

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 8/136 (5%)

Query: 219 FTQEQVACVCEVLQQSGNIERLGRFLWSLPACEKL------HKNESVLKAKAMVAFHRGN 272
           F+ +Q+ C+CE L Q+ + E+L       P    +      + + SVL+A     ++   
Sbjct: 20  FSSDQIDCICEALYQARDGEKLLELFQ--PNVHNVMYYRCRYYSSSVLRAYLYALYYGKR 77

Query: 273 FKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW 332
           +++L++ + S+ F    + +LQ LW KA Y E E+ R + LGAV KYR+R+K P PR+IW
Sbjct: 78  YEELFQTIASNTFEQRFYNELQDLWYKARYAENEERRQKELGAVEKYRLRKKHPPPRSIW 137

Query: 333 DGEETSYCFKEKSRSV 348
           DG+ET Y FKE +R +
Sbjct: 138 DGQETIYSFKENARKL 153



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 26/33 (78%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSV 158
           + KYR+R+K P PR+IWDG+ET Y FKE +R +
Sbjct: 121 VEKYRLRKKHPPPRSIWDGQETIYSFKENARKL 153


>gi|197282006|gb|ACH57182.1| Six3/6 [Trichoplax adhaerens]
          Length = 60

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 52/59 (88%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           GE+ ++CFKEK+R++LR+WY  +PYP+P +KRELA ATGLT TQV NWFKNRRQRDRAA
Sbjct: 1   GEQKTHCFKEKTRNLLREWYLRDPYPNPGKKRELANATGLTPTQVGNWFKNRRQRDRAA 59



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 43/51 (84%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           GE+ ++CFKEK+R++LR+WY  +PYP+P +KRELA ATGLT TQV NWF +
Sbjct: 1   GEQKTHCFKEKTRNLLREWYLRDPYPNPGKKRELANATGLTPTQVGNWFKN 51


>gi|405950149|gb|EKC18152.1| Protein sine oculis [Crassostrea gigas]
          Length = 321

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 8/130 (6%)

Query: 265 MVAFH--RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYRVR 322
           M+AF+  +  F+ +Y I+E+  F   N   L  +W +AHY E E+   RPL ++ ++R+R
Sbjct: 1   MIAFYLEKREFEKVYHIIENGHFI--NSEDLIEIWDQAHYREREENIHRPLNSLMRFRIR 58

Query: 323 RKFPLPRTIW-DGEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQV 378
           +KFP PR I   GE   +   E++R  L++W++    NPYPS +++ EL E TGLT  QV
Sbjct: 59  KKFPPPRNICPSGERPQHKLPERARETLKEWFSRHESNPYPSKQQREELCEETGLTDYQV 118

Query: 379 SNWFKNRRQR 388
             WF N R++
Sbjct: 119 KTWFSNARRK 128



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 4/75 (5%)

Query: 125 NIIKYRVRRKFPLPRTIW-DGEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEA 180
           +++++R+R+KFP PR I   GE   +   E++R  L++W++    NPYPS +++ EL E 
Sbjct: 51  SLMRFRIRKKFPPPRNICPSGERPQHKLPERARETLKEWFSRHESNPYPSKQQREELCEE 110

Query: 181 TGLTTTQVSNWFSSA 195
           TGLT  QV  WFS+A
Sbjct: 111 TGLTDYQVKTWFSNA 125


>gi|82621547|gb|ABB86445.1| NVHD093-SINE class homeobox protein, partial [Nematostella
           vectensis]
 gi|110339167|gb|ABG67847.1| SIX12B, partial [Nematostella vectensis]
          Length = 60

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 50/60 (83%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           GEET+YCFKEKSRS+L   Y  +PYP+PREK ELA+ T LT TQVSNWFKN+RQR RAAE
Sbjct: 1   GEETTYCFKEKSRSILNKAYVDSPYPTPREKHELAKMTDLTVTQVSNWFKNKRQRVRAAE 60



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/49 (71%), Positives = 40/49 (81%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           GEET+YCFKEKSRS+L   Y  +PYP+PREK ELA+ T LT TQVSNWF
Sbjct: 1   GEETTYCFKEKSRSILNKAYVDSPYPTPREKHELAKMTDLTVTQVSNWF 49


>gi|163961139|gb|ABY50071.1| sine oculis homeobox-like protein 3 [Pristina longiseta]
          Length = 403

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 335 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           ++ S+CFKE++R++LR+ Y  +PYPSP  KR LAE+TGLT TQV NWFKNRRQRDRAA  
Sbjct: 243 QQRSHCFKERTRNLLRESYLRDPYPSPGRKRHLAESTGLTPTQVGNWFKNRRQRDRAAAT 302

Query: 395 KDGS 398
           K+ S
Sbjct: 303 KNRS 306



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 39/48 (81%)

Query: 145 EETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           ++ S+CFKE++R++LR+ Y  +PYPSP  KR LAE+TGLT TQV NWF
Sbjct: 243 QQRSHCFKERTRNLLRESYLRDPYPSPGRKRHLAESTGLTPTQVGNWF 290


>gi|260790971|ref|XP_002590514.1| hypothetical protein BRAFLDRAFT_86186 [Branchiostoma floridae]
 gi|229275708|gb|EEN46525.1| hypothetical protein BRAFLDRAFT_86186 [Branchiostoma floridae]
          Length = 575

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 7/131 (5%)

Query: 263 KAMVAFH--RGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRPLGAVGKYR 320
           +A++  H   G F  ++++++++ F P     L  LW +AHY + +   G+PL +VGK+R
Sbjct: 12  RALITEHLWSGEFNMVFQLIQNYPFGPSA--DLVQLWDEAHYRQVKGSTGKPLTSVGKFR 69

Query: 321 VRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQ 377
           VR++FP P +I            +++  L+ W+    ++PYPS  EK +LA+ T LT  Q
Sbjct: 70  VRKRFPPPLSIAPHGRKMLTLPREAKKKLQAWFLDHLYHPYPSGAEKYDLAKLTDLTVKQ 129

Query: 378 VSNWFKNRRQR 388
           VS WF+N R+R
Sbjct: 130 VSTWFQNTRRR 140



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 123 IINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAE 179
           + ++ K+RVR++FP P +I            +++  L+ W+    ++PYPS  EK +LA+
Sbjct: 62  LTSVGKFRVRKRFPPPLSIAPHGRKMLTLPREAKKKLQAWFLDHLYHPYPSGAEKYDLAK 121

Query: 180 ATGLTTTQVSNWF 192
            T LT  QVS WF
Sbjct: 122 LTDLTVKQVSTWF 134


>gi|156308339|ref|XP_001617650.1| hypothetical protein NEMVEDRAFT_v1g157078 [Nematostella vectensis]
 gi|156195028|gb|EDO25550.1| predicted protein [Nematostella vectensis]
          Length = 69

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 48/68 (70%)

Query: 328 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           P    DGEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWFKNRRQ
Sbjct: 1   PSEFGDGEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQ 60

Query: 388 RDRAAEQK 395
           R R    K
Sbjct: 61  RGRIPSNK 68



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 41/57 (71%)

Query: 138 PRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           P    DGEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWF +
Sbjct: 1   PSEFGDGEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKN 57


>gi|341886592|gb|EGT42527.1| hypothetical protein CAEBREN_32192 [Caenorhabditis brenneri]
          Length = 185

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 12/115 (10%)

Query: 218 GFTQEQVACVCEVL----QQSGNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNF 273
            ++++++ C+CE L     Q+G  E+L  F+++LP C +    ES LKA+A+V F   N+
Sbjct: 16  SYSEQEIVCICESLFNEGLQTGRTEQLAAFIYNLPTCYQ--NIESALKAQALVHFTTQNW 73

Query: 274 KDLYRILESHQFSPHNHPKLQALWLKAHYVEA------EKLRGRPLGAVGKYRVR 322
           K LYR+LE H+FSP NH  LQ LWL AHY E       ++ R R  G + +   R
Sbjct: 74  KMLYRLLECHKFSPQNHTVLQNLWLDAHYKEVSNWFKNKRQRARAAGQLDRDSAR 128


>gi|110339171|gb|ABG67849.1| SIX45-like 1, partial [Nematostella vectensis]
          Length = 60

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 46/57 (80%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           GEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWFKNRRQRDR
Sbjct: 1   GEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQRDR 57



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           GEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWF +
Sbjct: 1   GEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKN 51


>gi|308220128|gb|ADO22636.1| SIX class homeobox transcription factor SIX13e [Mnemiopsis leidyi]
          Length = 347

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 6/141 (4%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLR 309
           C+K     + LK  A        +++++ I+ +  FS  NH  LQ LWL+ HY    +  
Sbjct: 181 CDKEKSTLNYLKTLA----REEQYEEMFVIISNFNFSEKNHSWLQTLWLRGHYARETQRL 236

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAE 369
           GRPL    + R+RR  P P+TI   ++  Y  +  ++  L+ +Y  N YPSP +K  L+ 
Sbjct: 237 GRPLNPADRLRLRRIQPFPQTISLPDD--YESQRFAKDFLKVFYAINEYPSPGQKMMLSA 294

Query: 370 ATGLTTTQVSNWFKNRRQRDR 390
              +T  QV++WFKNRR RDR
Sbjct: 295 RCRMTYHQVNSWFKNRRARDR 315


>gi|308220134|gb|ADO22639.1| SIX class homeobox transcription factor SIX36 [Mnemiopsis leidyi]
          Length = 60

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 44/50 (88%)

Query: 343 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           EK+R++LR+WY  NPYP+P  KR+LAEA GLT TQVSNWFKNRRQRDRAA
Sbjct: 10  EKARTILREWYIQNPYPAPNIKRDLAEAAGLTPTQVSNWFKNRRQRDRAA 59



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 35/42 (83%)

Query: 153 EKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           EK+R++LR+WY  NPYP+P  KR+LAEA GLT TQVSNWF +
Sbjct: 10  EKARTILREWYIQNPYPAPNIKRDLAEAAGLTPTQVSNWFKN 51


>gi|402230888|emb|CCG27802.1| sine oculis homeobox homolog 3/6 protein, partial [Botryllus
           schlosseri]
          Length = 162

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 18/122 (14%)

Query: 168 YPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTSTSTASISPILPSFGFTQEQVACV 227
           +P+P     L     +  T  SN   S  I   P            +P  G    Q+A V
Sbjct: 46  FPAPDIVSSLQRLRAMIATLHSNAMRSPAILPFP------------MPPLG--TNQIATV 91

Query: 228 CEVLQQSGNIERLGRFLWSLPAC----EKLHKNESVLKAKAMVAFHRGNFKDLYRILESH 283
           C+ L  S +IERL RFLWSLPA     E LH N+S+L+A+A+VA+H GN++++Y IL+ H
Sbjct: 92  CDTLVASHDIERLSRFLWSLPATPQITEALHSNDSLLRARAIVAYHHGNYREVYNILQHH 151

Query: 284 QF 285
            F
Sbjct: 152 SF 153


>gi|308220122|gb|ADO22633.1| SIX class homeobox transcription factor SIX13b [Mnemiopsis leidyi]
          Length = 292

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 292 KLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRD 351
           +++ LW  + Y        + L  + +YR+R++ PLP+TIW+GE+TSY  K+ +R  L  
Sbjct: 164 EIRDLWWDSVYQNHINKTQKKLTPMIRYRLRKRHPLPKTIWNGEQTSYNLKQSARDYLVT 223

Query: 352 WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSV 399
           +Y  N YP+  E+R +A  TG+    VS+WFKNRR R + A  K G V
Sbjct: 224 YYEKNQYPTATERRIIARDTGMEFKSVSHWFKNRRSRSKPAV-KSGDV 270



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 7/109 (6%)

Query: 89  YQALASHKSIFDKVVTSYKEVWKSPVKTYQ-----SSSIIINIIKYRVRRKFPLPRTIWD 143
           +Q   +  +I +  V   +++W   V  YQ     +   +  +I+YR+R++ PLP+TIW+
Sbjct: 148 FQQFVATTNIPESAVQEIRDLWWDSV--YQNHINKTQKKLTPMIRYRLRKRHPLPKTIWN 205

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           GE+TSY  K+ +R  L  +Y  N YP+  E+R +A  TG+    VS+WF
Sbjct: 206 GEQTSYNLKQSARDYLVTYYEKNQYPTATERRIIARDTGMEFKSVSHWF 254


>gi|156385345|ref|XP_001633591.1| predicted protein [Nematostella vectensis]
 gi|156220663|gb|EDO41528.1| predicted protein [Nematostella vectensis]
          Length = 275

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)

Query: 240 LGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLK 299
           L  FL +LP  EK    E++ +++A + F R  + +LY++L+ + F+  +   L  LW  
Sbjct: 43  LEMFLSTLPNTEKYKTEEALNRSRAYLEFQRKRYGNLYQLLKGNTFT--DAEDLVKLWDA 100

Query: 300 AHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIW-DGEETSYCFKEKSRSVLRDWYTHN-- 356
           AHY E    + +PL  + K+R+R++F  P+TI   G + S   KE +R +L+ W   N  
Sbjct: 101 AHYEEERAKKRKPLTPLAKFRIRQRFTPPKTICPKGRQKSTLPKEATR-ILQSWLNDNLE 159

Query: 357 -PYPSPREKRELAEATGLTTTQVSNWF 382
            PYP    K  L + T L+ TQV+ WF
Sbjct: 160 KPYPDAETKERLQQLTQLSKTQVNTWF 186



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 126 IIKYRVRRKFPLPRTIW-DGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEAT 181
           + K+R+R++F  P+TI   G + S   KE +R +L+ W   N   PYP    K  L + T
Sbjct: 117 LAKFRIRQRFTPPKTICPKGRQKSTLPKEATR-ILQSWLNDNLEKPYPDAETKERLQQLT 175

Query: 182 GLTTTQVSNWF 192
            L+ TQV+ WF
Sbjct: 176 QLSKTQVNTWF 186


>gi|82621513|gb|ABB86428.1| SIX4/5a-SINE class homeobox protein, partial [Nematostella
           vectensis]
          Length = 60

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 45/57 (78%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           GEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWFKNRRQR R
Sbjct: 1   GEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQRGR 57



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           GEET YCFKEK+R+ L+D Y  N YP+P+EKR +A+ T LT  QVSNWF +
Sbjct: 1   GEETVYCFKEKARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKN 51


>gi|50841478|gb|AAT69260.1| homeobox protein sine oculis six 1/2 [Macrostomum lignano]
          Length = 38

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/38 (94%), Positives = 38/38 (100%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR+VLR+WYTHNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRNVLREWYTHNPYPSPREKRELAEATGLTTTQ 38



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/38 (94%), Positives = 38/38 (100%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR+VLR+WYTHNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRNVLREWYTHNPYPSPREKRELAEATGLTTTQ 38


>gi|31337494|emb|CAC85550.1| sine oculis protein [Dugesia japonica]
          Length = 265

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 37/40 (92%)

Query: 357 PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           PYPSPREK++LAE T LTTTQVSNWFKNRRQRDRAAE KD
Sbjct: 1   PYPSPREKKDLAEMTSLTTTQVSNWFKNRRQRDRAAENKD 40



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/26 (84%), Positives = 24/26 (92%)

Query: 167 PYPSPREKRELAEATGLTTTQVSNWF 192
           PYPSPREK++LAE T LTTTQVSNWF
Sbjct: 1   PYPSPREKKDLAEMTSLTTTQVSNWF 26


>gi|308220160|gb|ADO22652.1| SIX class homeobox transcription factor SIX59a [Mnemiopsis leidyi]
          Length = 311

 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 2/129 (1%)

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG-RPLGAVGKYRVR 322
           A   F + ++++LY  L + +F P  HP+LQ LW   HY E    RG   L    KYR+R
Sbjct: 183 AYYLFQKQDWQELYHYLSNREFPPEYHPRLQELWFNGHYEEYRSSRGISTLSPHQKYRIR 242

Query: 323 RKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNW 381
            + PLP ++   +  ++  F  + R++L  ++  +PY S  +   L E T L++ Q+ N+
Sbjct: 243 SRNPLPLSLSSIKFRSNNNFSSRVRALLNKYFQKSPYVSSSDLEMLCEKTELSSQQIKNY 302

Query: 382 FKNRRQRDR 390
           FKN+R R +
Sbjct: 303 FKNKRTRTK 311


>gi|197282008|gb|ACH57183.1| Six1/2 [Trichoplax adhaerens]
          Length = 60

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 43/58 (74%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
           GE+ +Y FKE SR +L ++Y  NPYP+  EK  +AEA  LT  QVSNWFKN+RQRDRA
Sbjct: 1   GEKITYSFKESSRKMLVEYYQRNPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA 58



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 34/49 (69%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           GE+ +Y FKE SR +L ++Y  NPYP+  EK  +AEA  LT  QVSNWF
Sbjct: 1   GEKITYSFKESSRKMLVEYYQRNPYPTSEEKAIIAEAASLTKVQVSNWF 49


>gi|55774526|gb|AAV64848.1| transcription factor Six-3, partial [Notophthalmus viridescens]
          Length = 42

 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 301 HYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK 342
           HY EAEKLRGRPLG V KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 1   HYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFK 42



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 25/27 (92%)

Query: 126 IIKYRVRRKFPLPRTIWDGEETSYCFK 152
           + KYRVR+KFPLPRTIWDGE+ ++CFK
Sbjct: 16  VDKYRVRKKFPLPRTIWDGEQKTHCFK 42


>gi|50841466|gb|AAT69254.1| homeobox protein sine oculis six 1/2 [Porites astreoides]
          Length = 38

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 38/38 (100%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++LR+WY+HNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRNILREWYSHNPYPSPREKRELAEATGLTTTQ 38



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 38/38 (100%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++LR+WY+HNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRNILREWYSHNPYPSPREKRELAEATGLTTTQ 38


>gi|50841464|gb|AAT69253.1| homeobox protein sine oculis six 1/2 [Crassostrea gigas]
          Length = 38

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 37/38 (97%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++LR+WY HNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRTILREWYQHNPYPSPREKRELAEATGLTTTQ 38



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 37/38 (97%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++LR+WY HNPYPSPREKRELAEATGLTTTQ
Sbjct: 1   CFKEKSRTILREWYQHNPYPSPREKRELAEATGLTTTQ 38


>gi|332237406|ref|XP_003267895.1| PREDICTED: homeobox protein SIX4 [Nomascus leucogenys]
          Length = 573

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 39/52 (75%)

Query: 339 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
               EKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWFKNRRQRDR
Sbjct: 20  LVLLEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 71



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 31/44 (70%)

Query: 149 YCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
               EKSR+ L++ Y  N YPSP EKR LA+ TGL+ TQVSNWF
Sbjct: 20  LVLLEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWF 63


>gi|50841474|gb|AAT69258.1| homeobox protein sine oculis six 1/2 [Urechis caupo]
          Length = 38

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 36/38 (94%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR+VLR+WY HNPYPSPREKRELAE TGLTTTQ
Sbjct: 1   CFKEKSRTVLREWYAHNPYPSPREKRELAEGTGLTTTQ 38



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 36/38 (94%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR+VLR+WY HNPYPSPREKRELAE TGLTTTQ
Sbjct: 1   CFKEKSRTVLREWYAHNPYPSPREKRELAEGTGLTTTQ 38


>gi|50841470|gb|AAT69256.1| homeobox protein sine oculis six 1/2 [Anthopleura elegantissima]
          Length = 38

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 37/38 (97%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQ
Sbjct: 1   CFKEKSRNILREWYSHNPYPSPREKRELAENTGLTTTQ 38



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 37/38 (97%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++LR+WY+HNPYPSPREKRELAE TGLTTTQ
Sbjct: 1   CFKEKSRNILREWYSHNPYPSPREKRELAENTGLTTTQ 38


>gi|50841462|gb|AAT69252.1| homeobox protein sine oculis six 1/2 [Nutricola tantilla]
          Length = 38

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 36/38 (94%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR+VLR+WY HNPYPSPREKREL+E TGLTTTQ
Sbjct: 1   CFKEKSRTVLREWYAHNPYPSPREKRELSEGTGLTTTQ 38



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 36/38 (94%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR+VLR+WY HNPYPSPREKREL+E TGLTTTQ
Sbjct: 1   CFKEKSRTVLREWYAHNPYPSPREKRELSEGTGLTTTQ 38


>gi|50841476|gb|AAT69259.1| homeobox protein sine oculis six 1/2 [Macrostomum lignano]
 gi|50841482|gb|AAT69262.1| homeobox protein sine oculis six 1/2 [Macrostomum lignano]
          Length = 38

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR VLR+WY HNPYPSPREK+ELAE TGLTTTQ
Sbjct: 1   CFKEKSRQVLREWYAHNPYPSPREKKELAEETGLTTTQ 38



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR VLR+WY HNPYPSPREK+ELAE TGLTTTQ
Sbjct: 1   CFKEKSRQVLREWYAHNPYPSPREKKELAEETGLTTTQ 38


>gi|50841460|gb|AAT69251.1| homeobox protein sine oculis six 1/2 [Leucosolenia eleanor]
          Length = 38

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 36/38 (94%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR+ LR+WYTHNPYPSP+EKR+LAE TGLTTTQ
Sbjct: 1   CFKEKSRARLREWYTHNPYPSPKEKRDLAEQTGLTTTQ 38



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 36/38 (94%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR+ LR+WYTHNPYPSP+EKR+LAE TGLTTTQ
Sbjct: 1   CFKEKSRARLREWYTHNPYPSPKEKRDLAEQTGLTTTQ 38


>gi|50841468|gb|AAT69255.1| homeobox protein sine oculis six 1/2 [Chrysaora colorata]
 gi|50841472|gb|AAT69257.1| homeobox protein sine oculis six 1/2 [Bougainvillia bougainvillei]
          Length = 38

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 36/38 (94%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++LRDWYT NPYPSPREK++LA+ TGL+TTQ
Sbjct: 1   CFKEKSRAILRDWYTRNPYPSPREKKDLADGTGLSTTQ 38



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 36/38 (94%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++LRDWYT NPYPSPREK++LA+ TGL+TTQ
Sbjct: 1   CFKEKSRAILRDWYTRNPYPSPREKKDLADGTGLSTTQ 38


>gi|50841458|gb|AAT69250.1| homeobox protein sine oculis six 1/2 [Acanthascus dawsoni]
          Length = 38

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 34/38 (89%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR +LRDWY  NPYPSPREKRELA+ TGLTTTQ
Sbjct: 1   CFKEKSRGLLRDWYLKNPYPSPREKRELADLTGLTTTQ 38



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 34/38 (89%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR +LRDWY  NPYPSPREKRELA+ TGLTTTQ
Sbjct: 1   CFKEKSRGLLRDWYLKNPYPSPREKRELADLTGLTTTQ 38


>gi|82621629|gb|ABB86486.1| SIX4/5b-SINE class homeobox protein, partial [Nematostella
           vectensis]
 gi|110339173|gb|ABG67850.1| SIX45-like 2, partial [Nematostella vectensis]
          Length = 60

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 42/59 (71%)

Query: 334 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           GE+T Y FKEK R+VL++ Y H  YP+ +EKR +A  T LT  QV NWF+NRR RDR +
Sbjct: 1   GEKTIYFFKEKVRTVLKECYEHKKYPTLKEKRVIATQTNLTLRQVRNWFRNRRHRDRIS 59



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 35/51 (68%)

Query: 144 GEETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           GE+T Y FKEK R+VL++ Y H  YP+ +EKR +A  T LT  QV NWF +
Sbjct: 1   GEKTIYFFKEKVRTVLKECYEHKKYPTLKEKRVIATQTNLTLRQVRNWFRN 51


>gi|50841490|gb|AAT69266.1| homeobox protein sine oculis six 1/2 [Cyanea capillata]
          Length = 38

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 35/38 (92%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++LR+WY  NPYPSPREK++LA+ TGL+TTQ
Sbjct: 1   CFKEKSRAILREWYVRNPYPSPREKKDLADGTGLSTTQ 38



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 35/38 (92%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++LR+WY  NPYPSPREK++LA+ TGL+TTQ
Sbjct: 1   CFKEKSRAILREWYVRNPYPSPREKKDLADGTGLSTTQ 38


>gi|426247650|ref|XP_004017592.1| PREDICTED: LOW QUALITY PROTEIN: anomalous homeobox protein-like
           [Ovis aries]
          Length = 496

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG-R 311
           L  N  V    A V   R   +   R+LE  Q  P   PKL  LW   HY  A K  G  
Sbjct: 51  LLDNADVALVCASVLAQREQHQAACRLLEGCQV-PGGSPKLVQLWNDIHYRLAMKRLGVS 109

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+ +LA  
Sbjct: 110 TLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREDLASE 169

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQK 395
           T LTT QV NWF N R+R RA  Q+
Sbjct: 170 THLTTEQVYNWFANYRRRQRALMQR 194



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 121 SIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAE 179
           S +  + K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+ +LA 
Sbjct: 109 STLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREDLAS 168

Query: 180 ATGLTTTQVSNWFSS 194
            T LTT QV NWF++
Sbjct: 169 ETHLTTEQVYNWFAN 183


>gi|359074575|ref|XP_003587187.1| PREDICTED: uncharacterized protein LOC531406 [Bos taurus]
          Length = 381

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V    A V   R   +   R+LE  Q  P   PKL  LW   HY +  +KL   
Sbjct: 55  LLDNADVALVCASVLAQREQHQAACRLLEGCQV-PGGSPKLVQLWNDIHYRLAMKKLGVS 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+  LA  
Sbjct: 114 TLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREGLASE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQK 395
           T LTT QV NWF N R+R RA  Q+
Sbjct: 174 THLTTEQVYNWFANYRRRQRALMQR 198



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 121 SIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAE 179
           S +  + K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+  LA 
Sbjct: 113 STLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREGLAS 172

Query: 180 ATGLTTTQVSNWFSS 194
            T LTT QV NWF++
Sbjct: 173 ETHLTTEQVYNWFAN 187


>gi|308220138|gb|ADO22641.1| SIX class homeobox transcription factor SIX59c [Mnemiopsis leidyi]
          Length = 376

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 7/120 (5%)

Query: 275 DLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRGRP-----LGAVGKYRVRRKFPLPR 329
           DL   + +  F+   HP LQ LW  A Y E+  L   P     L    KYR+R++ P+P 
Sbjct: 257 DLLTYISTSSFNQAEHPALQKLWFNAVY-ESYILTKVPEKQKHLTPAVKYRLRKQNPVPV 315

Query: 330 TIWDGEE-TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +I      T+  F ++ RS L   +  N  P+P   + L E TGLT  Q+ N+FKN+R R
Sbjct: 316 SISSTAPCTNNYFSQEVRSTLDAAFNLNNRPTPEMVKILREQTGLTAKQIRNYFKNKRSR 375



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 127 IKYRVRRKFPLPRTIWDGEE-TSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTT 185
           +KYR+R++ P+P +I      T+  F ++ RS L   +  N  P+P   + L E TGLT 
Sbjct: 303 VKYRLRKQNPVPVSISSTAPCTNNYFSQEVRSTLDAAFNLNNRPTPEMVKILREQTGLTA 362

Query: 186 TQVSNWF 192
            Q+ N+F
Sbjct: 363 KQIRNYF 369


>gi|308220140|gb|ADO22642.1| SIX class homeobox transcription factor SIX59d [Mnemiopsis leidyi]
          Length = 249

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 262 AKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG--RPLGAVGKY 319
           A A   + +G + +L   + S+ F   +H  LQ L+  + Y E  K+    R L    KY
Sbjct: 120 AVAQSLYRQGEYDELISFISSNFFPTSDHELLQTLYYNSLY-ELHKISTGKRRLEPTQKY 178

Query: 320 RVRRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           R+R+  PLP TI   +  ++  F +  +S+L   +     PSP   + L+E+TGLT  Q+
Sbjct: 179 RLRKSHPLPSTISSVKFRSNNHFDDNVKSLLLAVFKKERTPSPETIQTLSESTGLTERQI 238

Query: 379 SNWFKNRRQR 388
            N+FKN+R R
Sbjct: 239 RNFFKNKRSR 248



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 128 KYRVRRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 186
           KYR+R+  PLP TI   +  ++  F +  +S+L   +     PSP   + L+E+TGLT  
Sbjct: 177 KYRLRKSHPLPSTISSVKFRSNNHFDDNVKSLLLAVFKKERTPSPETIQTLSESTGLTER 236

Query: 187 QVSNWF 192
           Q+ N+F
Sbjct: 237 QIRNFF 242


>gi|358416287|ref|XP_003583347.1| PREDICTED: uncharacterized protein LOC531406 [Bos taurus]
          Length = 381

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V    A V   R   +   R+LE  Q  P   P+L  LW   HY +  +KL   
Sbjct: 55  LLDNADVALVCASVLAQREQHQAACRLLEGCQV-PGGSPQLVQLWNDIHYRLAMKKLGVS 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+  LA  
Sbjct: 114 TLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREGLASE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQK 395
           T LTT QV NWF N R+R RA  Q+
Sbjct: 174 THLTTEQVYNWFANYRRRQRALMQR 198



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 121 SIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAE 179
           S +  + K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+  LA 
Sbjct: 113 STLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREGLAS 172

Query: 180 ATGLTTTQVSNWFSS 194
            T LTT QV NWF++
Sbjct: 173 ETHLTTEQVYNWFAN 187


>gi|440909755|gb|ELR59632.1| hypothetical protein M91_11675 [Bos grunniens mutus]
          Length = 379

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 3/145 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V    A V   R   +   R+LE  Q  P   PKL  LW   HY +  +KL   
Sbjct: 55  LLDNADVALVCASVLAQREQHQAACRLLEGCQV-PGGSPKLVQLWNDIHYRLAMKKLGVS 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+ +  +  PS  E+  LA  
Sbjct: 114 TLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLEDFASGVSTNPSKAEREGLASE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQK 395
             LTT QV NWF N R+R RA  Q+
Sbjct: 174 MHLTTEQVYNWFANYRRRQRALMQR 198


>gi|308220136|gb|ADO22640.1| SIX class homeobox transcription factor SIX59b [Mnemiopsis leidyi]
          Length = 345

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHYVEAEKLRG--RPLGAVGKYRV 321
           A   + +  F++L   L S  F   +H  LQ+L+  + Y E  K+    R L    KY++
Sbjct: 218 AQTLYEQKEFEELVTYLSSTYFPSSDHAHLQSLYYNSLY-ELHKISTGKRRLEPSHKYKL 276

Query: 322 RRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSN 380
           RR  PLP TI   +  T+  F +  +S+L   +     PSP   + L++ TGLT  Q+ N
Sbjct: 277 RRSNPLPSTISSVKFRTNNHFDDNVKSLLLAVFKRERTPSPDTIQTLSDKTGLTERQIRN 336

Query: 381 WFKNRRQR 388
           +FKN+R R
Sbjct: 337 FFKNKRSR 344



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 128 KYRVRRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 186
           KY++RR  PLP TI   +  T+  F +  +S+L   +     PSP   + L++ TGLT  
Sbjct: 273 KYKLRRSNPLPSTISSVKFRTNNHFDDNVKSLLLAVFKRERTPSPDTIQTLSDKTGLTER 332

Query: 187 QVSNWF 192
           Q+ N+F
Sbjct: 333 QIRNFF 338


>gi|50841488|gb|AAT69265.1| homeobox protein sine oculis six 1/2 [Mnemiopsis leidyi]
          Length = 38

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 31/38 (81%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR++L++WY+ NPYPSP  KRELA   GLT TQ
Sbjct: 1   CFKEKSRAILKEWYSKNPYPSPHTKRELANTAGLTATQ 38



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 31/38 (81%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR++L++WY+ NPYPSP  KRELA   GLT TQ
Sbjct: 1   CFKEKSRAILKEWYSKNPYPSPHTKRELANTAGLTATQ 38


>gi|308220150|gb|ADO22647.1| SIX class homeobox transcription factor SIX59e [Mnemiopsis leidyi]
          Length = 244

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 264 AMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKA----HYVEAEKLRGRPLGAVGKY 319
           A   + +  F +L   L S  F   +H  LQ+L+  +    H +   K R  P     KY
Sbjct: 117 AQTLYEQKEFDELVTYLSSTYFPSSDHAHLQSLYYNSLYELHMISTGKRRLEP---SHKY 173

Query: 320 RVRRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQV 378
           ++RR  PLP TI   +  T+  F +  +S+L   +     PSP   + L++ TGLT  Q+
Sbjct: 174 KLRRSNPLPSTISSVKFRTNNHFDDNVKSLLLAVFKRERTPSPDTIQTLSDKTGLTERQI 233

Query: 379 SNWFKNRRQR 388
            N+FKN+R R
Sbjct: 234 RNFFKNKRSR 243



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 128 KYRVRRKFPLPRTIWDGE-ETSYCFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTT 186
           KY++RR  PLP TI   +  T+  F +  +S+L   +     PSP   + L++ TGLT  
Sbjct: 172 KYKLRRSNPLPSTISSVKFRTNNHFDDNVKSLLLAVFKRERTPSPDTIQTLSDKTGLTER 231

Query: 187 QVSNWF 192
           Q+ N+F
Sbjct: 232 QIRNFF 237


>gi|5825500|gb|AAD53273.1| Six3 protein [Xenopus laevis]
          Length = 42

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/42 (59%), Positives = 37/42 (88%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQ 294
           ++K+ES+L+A+A+VAFH GNF+DLY ILE+H+F+  +H KLQ
Sbjct: 1   INKHESILRARAVVAFHTGNFRDLYHILENHKFTKDSHGKLQ 42


>gi|345791274|ref|XP_543340.3| PREDICTED: uncharacterized protein LOC486215 [Canis lupus
           familiaris]
          Length = 374

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V    A V   +   +   R+LE  Q  P    +L  LW   HY +  ++L   
Sbjct: 55  LLDNADVALVCARVLAQQEQHQAACRVLEGCQV-PGGSQELVQLWNDIHYRLVMKRLGVV 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++  G   S  F  + R  L D+ +  +P PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPGGLKSRNFPREVRQKLHDFASGVSPNPSKVEREHLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQK 395
           T LT  QV NWF N R+R RA  Q+
Sbjct: 174 TSLTVEQVYNWFANYRRRQRALVQR 198



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 123 IINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEAT 181
           +  + K+R R++ P P ++  G   S  F  + R  L D+ +  +P PS  E+  LA  T
Sbjct: 115 LTPVQKFRCRKRNPPPPSLCPGGLKSRNFPREVRQKLHDFASGVSPNPSKVEREHLALET 174

Query: 182 GLTTTQVSNWFSS 194
            LT  QV NWF++
Sbjct: 175 SLTVEQVYNWFAN 187


>gi|254571415|ref|XP_002492817.1| Homeodomain-containing transcriptional repressor of PTR2
           [Komagataella pastoris GS115]
 gi|238032615|emb|CAY70638.1| Homeodomain-containing transcriptional repressor of PTR2
           [Komagataella pastoris GS115]
 gi|328353175|emb|CCA39573.1| Putative homeobox protein knotted-1-like 5 [Komagataella pastoris
           CBS 7435]
          Length = 244

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 3/62 (4%)

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           T+ D ++      +++ ++L DW  +N   PYP+PR+K EL E TGLT+ Q+SNWF N R
Sbjct: 167 TVSDSKKRRSNLPKRTTTILSDWLVNNLNHPYPNPRQKLELIEQTGLTSQQLSNWFINAR 226

Query: 387 QR 388
           +R
Sbjct: 227 RR 228



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query: 140 TIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           T+ D ++      +++ ++L DW  +N   PYP+PR+K EL E TGLT+ Q+SNWF +A
Sbjct: 167 TVSDSKKRRSNLPKRTTTILSDWLVNNLNHPYPNPRQKLELIEQTGLTSQQLSNWFINA 225


>gi|290984117|ref|XP_002674774.1| homeodomain-containing protein [Naegleria gruberi]
 gi|284088366|gb|EFC42030.1| homeodomain-containing protein [Naegleria gruberi]
          Length = 796

 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 3/57 (5%)

Query: 336 ETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD 389
           E  +     +  VLRDW+     +PYPS +EK++L+E TGLT  QV+NWF N R+R+
Sbjct: 699 ERKHFLPSNATDVLRDWFLDHIEHPYPSSKEKQDLSEQTGLTYVQVANWFTNTRKRN 755



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 146 ETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           E  +     +  VLRDW+     +PYPS +EK++L+E TGLT  QV+NWF++ 
Sbjct: 699 ERKHFLPSNATDVLRDWFLDHIEHPYPSSKEKQDLSEQTGLTYVQVANWFTNT 751


>gi|50304091|ref|XP_451995.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641127|emb|CAH02388.1| KLLA0B10450p [Kluyveromyces lactis]
          Length = 389

 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 3/45 (6%)

Query: 347 SVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +VL DW     HNPYP+P+ KREL E TGL   Q+SNWF N R+R
Sbjct: 262 NVLNDWLLKNLHNPYPTPQVKRELLEKTGLNPVQLSNWFINVRRR 306



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 157 SVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWF 192
           +VL DW     HNPYP+P+ KREL E TGL   Q+SNWF
Sbjct: 262 NVLNDWLLKNLHNPYPTPQVKRELLEKTGLNPVQLSNWF 300


>gi|402576680|gb|EJW70638.1| hypothetical protein WUBG_18457, partial [Wuchereria bancrofti]
          Length = 59

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 306 EKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT 354
           E+ R + LGAV KYR+R+K P PR+IWDG+ET Y FKE +R +   W T
Sbjct: 2   EERRQKELGAVEKYRLRKKHPPPRSIWDGQETIYSFKENARKL---WLT 47



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT 164
           KYR+R+K P PR+IWDG+ET Y FKE +R +   W T
Sbjct: 14  KYRLRKKHPPPRSIWDGQETIYSFKENARKL---WLT 47


>gi|281204479|gb|EFA78674.1| hypothetical protein PPL_08133 [Polysphondylium pallidum PN500]
          Length = 149

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 5/53 (9%)

Query: 347 SVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR--DRAAEQ 394
           SVL++W+ +N   PYP+  EK ELA  +GLT  QVSNWF N R+R  DR  +Q
Sbjct: 88  SVLKEWFINNLVKPYPTQSEKEELASQSGLTVAQVSNWFINSRRRNLDRLRKQ 140



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 157 SVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           SVL++W+ +N   PYP+  EK ELA  +GLT  QVSNWF
Sbjct: 88  SVLKEWFINNLVKPYPTQSEKEELASQSGLTVAQVSNWF 126


>gi|344257224|gb|EGW13328.1| Homeobox protein SIX2 [Cricetulus griseus]
          Length = 256

 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKL 308
           C +L  NE V      V   +  +    +IL+  Q  P    +L  LW   HY +   +L
Sbjct: 52  CWELLSNEEVALVCTQVLIQKEQWLLALQILKGCQV-PGGSQELVELWNDIHYHLTTRRL 110

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKREL 367
               L    ++R R++ P P  I      S  F  + R  L+D+ T    YP      +L
Sbjct: 111 SVTKLNPGQRFRCRKRNPPPPNICPEGPKSRNFLPEVRYHLQDFATSVGAYPKKAHLEKL 170

Query: 368 AEATGLTTTQVSNWFKNRRQRDRA 391
           A  TGLTT QV NWF N R+R RA
Sbjct: 171 ALETGLTTEQVYNWFANYRRRQRA 194



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           ++R R++ P P  I      S  F  + R  L+D+ T    YP      +LA  TGLTT 
Sbjct: 120 RFRCRKRNPPPPNICPEGPKSRNFLPEVRYHLQDFATSVGAYPKKAHLEKLALETGLTTE 179

Query: 187 QVSNWFSS 194
           QV NWF++
Sbjct: 180 QVYNWFAN 187


>gi|354502897|ref|XP_003513518.1| PREDICTED: hypothetical protein LOC100751696 [Cricetulus griseus]
          Length = 482

 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 250 CEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKL 308
           C +L  NE V      V   +  +    +IL+  Q  P    +L  LW   HY +   +L
Sbjct: 52  CWELLSNEEVALVCTQVLIQKEQWLLALQILKGCQV-PGGSQELVELWNDIHYHLTTRRL 110

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKREL 367
               L    ++R R++ P P  I      S  F  + R  L+D+ T    YP      +L
Sbjct: 111 SVTKLNPGQRFRCRKRNPPPPNICPEGPKSRNFLPEVRYHLQDFATSVGAYPKKAHLEKL 170

Query: 368 AEATGLTTTQVSNWFKNRRQRDRA 391
           A  TGLTT QV NWF N R+R RA
Sbjct: 171 ALETGLTTEQVYNWFANYRRRQRA 194



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 128 KYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEATGLTTT 186
           ++R R++ P P  I      S  F  + R  L+D+ T    YP      +LA  TGLTT 
Sbjct: 120 RFRCRKRNPPPPNICPEGPKSRNFLPEVRYHLQDFATSVGAYPKKAHLEKLALETGLTTE 179

Query: 187 QVSNWFSS 194
           QV NWF++
Sbjct: 180 QVYNWFAN 187


>gi|298709323|emb|CBJ31259.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 259

 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           + E++ S+L +W+  +   PYP+ +EK ELAE T LTT Q+SNWF N+R+R
Sbjct: 105 YDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKR 155



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 3/47 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSS 194
           + E++ S+L +W+  +   PYP+ +EK ELAE T LTT Q+SNWF++
Sbjct: 105 YDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTN 151


>gi|355786683|gb|EHH66866.1| hypothetical protein EGM_03934 [Macaca fascicularis]
          Length = 379

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYHLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHDFAVRVNTNPSKTERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|355564854|gb|EHH21354.1| hypothetical protein EGK_04392 [Macaca mulatta]
          Length = 379

 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYHLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHDFAVRVNTNPSKTERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|109099367|ref|XP_001087068.1| PREDICTED: hypothetical protein LOC695738 [Macaca mulatta]
          Length = 379

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYHLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L D+    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHDFAVRVNTNPSKTERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|226508164|ref|NP_001140490.1| uncharacterized protein LOC100272551 [Zea mays]
 gi|223973299|gb|ACN30837.1| unknown [Zea mays]
          Length = 486

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR 160
           KV+ ++  + K  +  +        +++      F  P  IW          E++ SVLR
Sbjct: 189 KVIANHGIIAKDDMANFALMGGGAGLLRGNSVNAFSQPHNIW---RPQRGLPERAVSVLR 245

Query: 161 DW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 246 SWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 285



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 223 FSQPHNIW---RPQRGLPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 279

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 280 FINARVR 286


>gi|238013690|gb|ACR37880.1| unknown [Zea mays]
 gi|413945573|gb|AFW78222.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 576

 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR 160
           KV+ ++  + K  +  +        +++      F  P  IW          E++ SVLR
Sbjct: 279 KVIANHGIIAKDDMANFALMGGGAGLLRGNSVNAFSQPHNIW---RPQRGLPERAVSVLR 335

Query: 161 DW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 336 SWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 375



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 313 FSQPHNIW---RPQRGLPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 369

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 370 FINARVR 376


>gi|384488372|gb|EIE80552.1| hypothetical protein RO3G_05257 [Rhizopus delemar RA 99-880]
          Length = 174

 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++LR+W   + HNPYP+  EK EL  ATGLT  Q+SNWF N R+R
Sbjct: 104 AILREWLIDHCHNPYPTESEKNELRLATGLTLNQISNWFINARRR 148



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           ++LR+W   + HNPYP+  EK EL  ATGLT  Q+SNWF +A
Sbjct: 104 AILREWLIDHCHNPYPTESEKNELRLATGLTLNQISNWFINA 145


>gi|194699702|gb|ACF83935.1| unknown [Zea mays]
          Length = 308

 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR 160
           KV+ ++  + K  +  +        +++      F  P  IW          E++ SVLR
Sbjct: 11  KVIANHGIIAKDDMANFALMGGGAGLLRGNSVNAFSQPHNIW---RPQRGLPERAVSVLR 67

Query: 161 DW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 68  SWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 107



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 314 GAVGKYRVR--RKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELA 368
           G  G  R      F  P  IW          E++ SVLR W + H  +PYP+  +K+ LA
Sbjct: 32  GGAGLLRGNSVNAFSQPHNIW---RPQRGLPERAVSVLRSWLFEHFLHPYPTDSDKQMLA 88

Query: 369 EATGLTTTQVSNWFKNRRQR 388
           + TGLT  QVSNWF N R R
Sbjct: 89  KQTGLTRNQVSNWFINARVR 108


>gi|322701383|gb|EFY93133.1| homeobox and C2H2 transcription factor, putative [Metarhizium
           acridum CQMa 102]
          Length = 562

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFRV 404
           +LRDW+  N   PYP+  EK  LAE +GL+ TQV NWF N R+R R + Q   +  +FR 
Sbjct: 259 ILRDWFAVNIQHPYPTDDEKMTLAEQSGLSRTQVINWFTNARRRHRLSTQPMVNNATFRA 318

Query: 405 N 405
            
Sbjct: 319 G 319



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +LRDW+  N   PYP+  EK  LAE +GL+ TQV NWF++A
Sbjct: 259 ILRDWFAVNIQHPYPTDDEKMTLAEQSGLSRTQVINWFTNA 299


>gi|322709672|gb|EFZ01248.1| homeobox and C2H2 transcription factor, putative [Metarhizium
           anisopliae ARSEF 23]
          Length = 563

 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFRV 404
           +LRDW+  N   PYP+  EK  LAE +GL+ TQV NWF N R+R R + Q   +  +FR 
Sbjct: 259 ILRDWFAVNIQHPYPTDDEKMTLAEQSGLSRTQVINWFTNARRRHRLSTQPMVNNATFRA 318

Query: 405 N 405
            
Sbjct: 319 G 319



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +LRDW+  N   PYP+  EK  LAE +GL+ TQV NWF++A
Sbjct: 259 ILRDWFAVNIQHPYPTDDEKMTLAEQSGLSRTQVINWFTNA 299


>gi|414879705|tpg|DAA56836.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 587

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 15/83 (18%)

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKR 365
           RG  +GA G+         P  IW  +       E++ SVLR W + H  +PYP+  +K+
Sbjct: 329 RGSSVGAFGQ---------PHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDGDKQ 376

Query: 366 ELAEATGLTTTQVSNWFKNRRQR 388
            LA+ TGLT  QVSNWF N R R
Sbjct: 377 MLAKQTGLTRNQVSNWFINARVR 399



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 336 FGQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 392

Query: 192 FSSANI 197
           F +A +
Sbjct: 393 FINARV 398


>gi|67524467|ref|XP_660295.1| hypothetical protein AN2691.2 [Aspergillus nidulans FGSC A4]
 gi|40743909|gb|EAA63093.1| hypothetical protein AN2691.2 [Aspergillus nidulans FGSC A4]
          Length = 1352

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 341  FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
            F  K   VLRDW+  N   PYPS  EK  LA  TG +  ++S WF N R+R +  +Q   
Sbjct: 984  FVRKGARVLRDWFYQNEHCPYPSEEEKARLAAETGFSRQRISTWFANARRRHKQQKQART 1043

Query: 398  SVHSFRVN 405
            S   FR  
Sbjct: 1044 STRVFRAG 1051



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 151  FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
            F  K   VLRDW+  N   PYPS  EK  LA  TG +  ++S WF++A
Sbjct: 984  FVRKGARVLRDWFYQNEHCPYPSEEEKARLAAETGFSRQRISTWFANA 1031


>gi|414879706|tpg|DAA56837.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 311

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 15/83 (18%)

Query: 309 RGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKR 365
           RG  +GA G+         P  IW  +       E++ SVLR W + H  +PYP+  +K+
Sbjct: 53  RGSSVGAFGQ---------PHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDGDKQ 100

Query: 366 ELAEATGLTTTQVSNWFKNRRQR 388
            LA+ TGLT  QVSNWF N R R
Sbjct: 101 MLAKQTGLTRNQVSNWFINARVR 123



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 60  FGQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 116

Query: 192 FSSANI 197
           F +A +
Sbjct: 117 FINARV 122


>gi|306526248|sp|A8WL06.2|UNC62_CAEBR RecName: Full=Homeobox protein unc-62; AltName: Full=Uncoordinated
           protein 62
          Length = 725

 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 19/98 (19%)

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSY----------------CFKEKSRSVLRDWY 353
           G P G VGK R R +F +  +  DG ++                   F +++ +  R W 
Sbjct: 512 GTPNGRVGKSRGRDEFSVCGSNEDGRDSVLSDSANGSQNGKRKVPKVFSKEAITKFRAWL 571

Query: 354 THN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             N   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 572 FQNLAHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 609



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ +  R W   N   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 559 FSKEAITKFRAWLFQNLAHPYPSEEQKKQLAKETGLTILQVNNWFINA 606


>gi|268564863|ref|XP_002647234.1| C. briggsae CBR-UNC-62 protein [Caenorhabditis briggsae]
          Length = 733

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 19/98 (19%)

Query: 310 GRPLGAVGKYRVRRKFPLPRTIWDGEETSY----------------CFKEKSRSVLRDWY 353
           G P G VGK R R +F +  +  DG ++                   F +++ +  R W 
Sbjct: 520 GTPNGRVGKSRGRDEFSVCGSNEDGRDSVLSDSANGSQNGKRKVPKVFSKEAITKFRAWL 579

Query: 354 THN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             N   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 580 FQNLAHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 617



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ +  R W   N   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 567 FSKEAITKFRAWLFQNLAHPYPSEEQKKQLAKETGLTILQVNNWFINA 614


>gi|323337590|gb|EGA78835.1| Tos8p [Saccharomyces cerevisiae Vin13]
          Length = 109

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D +
Sbjct: 40  SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDAN 94



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 40  SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 81


>gi|115492257|ref|XP_001210756.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114197616|gb|EAU39316.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 483

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 3/44 (6%)

Query: 348 VLRDW-YTHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           VLR W Y H   PYP+ REK ELAE TGL  TQ+SNWF N R+R
Sbjct: 124 VLRAWLYQHREYPYPTDREKEELAEQTGLDKTQISNWFSNTRRR 167



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 6/64 (9%)

Query: 158 VLRDW-YTHN--PYPSPREKRELAEATGLTTTQVSNWFSSA---NITSSPNTSTSTASIS 211
           VLR W Y H   PYP+ REK ELAE TGL  TQ+SNWFS+     +T  P+       +S
Sbjct: 124 VLRAWLYQHREYPYPTDREKEELAEQTGLDKTQISNWFSNTRRRKLTRLPSMDDPPVDVS 183

Query: 212 PILP 215
            + P
Sbjct: 184 LLSP 187


>gi|443719780|gb|ELU09790.1| hypothetical protein CAPTEDRAFT_100741 [Capitella teleta]
          Length = 135

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           F E +R +L+DW  H+   PYP+ +EK  L+ +TGLT  QVS W+ N R+R R
Sbjct: 4   FPETARRILQDWLDHHFAYPYPNQQEKESLSRSTGLTVQQVSTWYANHRRRLR 56



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSS 194
           F E +R +L+DW  H+   PYP+ +EK  L+ +TGLT  QVS W+++
Sbjct: 4   FPETARRILQDWLDHHFAYPYPNQQEKESLSRSTGLTVQQVSTWYAN 50


>gi|6321342|ref|NP_011419.1| Tos8p [Saccharomyces cerevisiae S288c]
 gi|1723892|sp|P53147.1|TOS8_YEAST RecName: Full=Homeobox protein TOS8; AltName: Full=Target of SBF 8
 gi|1322631|emb|CAA96802.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|45270882|gb|AAS56822.1| YGL096W [Saccharomyces cerevisiae]
 gi|151943712|gb|EDN62022.1| target of Sbf [Saccharomyces cerevisiae YJM789]
 gi|190407052|gb|EDV10319.1| homeobox protein TOS8 [Saccharomyces cerevisiae RM11-1a]
 gi|285812110|tpg|DAA08010.1| TPA: Tos8p [Saccharomyces cerevisiae S288c]
 gi|392299166|gb|EIW10260.1| Tos8p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 276

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D +
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDAN 261



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 248


>gi|326427768|gb|EGD73338.1| hypothetical protein PTSG_05049 [Salpingoeca sp. ATCC 50818]
          Length = 489

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 341 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  +S  VL  W     HNPYPS  EK+EL  A+GL   Q++NWF N R+R     + DG
Sbjct: 378 FPRRSTKVLTQWLMRNVHNPYPSEEEKQELRAASGLDLVQLNNWFINARRRMLVKVKGDG 437

Query: 398 SVHSFRV 404
           +   F V
Sbjct: 438 ASAVFHV 444



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F  +S  VL  W     HNPYPS  EK+EL  A+GL   Q++NWF +A
Sbjct: 378 FPRRSTKVLTQWLMRNVHNPYPSEEEKQELRAASGLDLVQLNNWFINA 425


>gi|259146411|emb|CAY79668.1| Tos8p [Saccharomyces cerevisiae EC1118]
          Length = 276

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D +
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDAN 261



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 248


>gi|320170617|gb|EFW47516.1| pre-B-cell leukemia transcription factor 3D [Capsaspora owczarzaki
           ATCC 30864]
          Length = 212

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 318 KYRVRRK-----FPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAE 369
           +Y+++RK       L  T  D  +       +++ VL DW+     +PYPS  EK +LA+
Sbjct: 130 EYQLKRKVYTKVIFLKSTFLDSRKRRINLSREAQQVLNDWFLAHIEHPYPSESEKEQLAD 189

Query: 370 ATGLTTTQVSNWFKNRRQR 388
            T LT  Q+S WF N+R R
Sbjct: 190 QTNLTMRQISTWFANKRNR 208



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 127 IKYRVRRK-----FPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREKRELA 178
           ++Y+++RK       L  T  D  +       +++ VL DW+     +PYPS  EK +LA
Sbjct: 129 LEYQLKRKVYTKVIFLKSTFLDSRKRRINLSREAQQVLNDWFLAHIEHPYPSESEKEQLA 188

Query: 179 EATGLTTTQVSNWFSS 194
           + T LT  Q+S WF++
Sbjct: 189 DQTNLTMRQISTWFAN 204


>gi|323309056|gb|EGA62284.1| Tos8p [Saccharomyces cerevisiae FostersO]
          Length = 192

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 5/60 (8%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFR 403
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D   ++FR
Sbjct: 123 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQND--ANNFR 180



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 123 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 164


>gi|256082763|ref|XP_002577622.1| irx-related [Schistosoma mansoni]
 gi|353230206|emb|CCD76377.1| irx-related [Schistosoma mansoni]
          Length = 535

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             + + SV+  WYT+   NPYP+  EK ELA   G+T  QVS+WF NRR R
Sbjct: 435 LNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFANRRTR 485



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 151 FKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWFSS 194
             + + SV+  WYT+   NPYP+  EK ELA   G+T  QVS+WF++
Sbjct: 435 LNQTALSVMESWYTNHVDNPYPTTAEKEELAALGGITVIQVSSWFAN 481


>gi|323355110|gb|EGA86940.1| Tos8p [Saccharomyces cerevisiae VL3]
          Length = 274

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D +
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDAN 261



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 207 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 248


>gi|349578131|dbj|GAA23297.1| K7_Tos8bp, partial [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 106

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R   + Q D +
Sbjct: 37  SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRKIFSGQNDAN 91



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 37  SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 78


>gi|399529266|gb|AFP44693.1| hypothetical protein [Eragrostis tef]
          Length = 405

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E++ SVLR W+  N   PYPS  +K+ LA  TGLT  QVSNWF N R R
Sbjct: 272 ERAVSVLRRWFFDNFLHPYPSDEDKKMLATRTGLTQNQVSNWFGNARGR 320



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 3/46 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           E++ SVLR W+  N   PYPS  +K+ LA  TGLT  QVSNWF +A
Sbjct: 272 ERAVSVLRRWFFDNFLHPYPSDEDKKMLATRTGLTQNQVSNWFGNA 317


>gi|355719511|gb|AES06625.1| SIX homeobox 1 [Mustela putorius furo]
          Length = 93

 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/26 (92%), Positives = 25/26 (96%)

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQKD 396
           TGLTTTQVSNWFKNRRQRDRAAE K+
Sbjct: 1   TGLTTTQVSNWFKNRRQRDRAAEAKE 26


>gi|50841480|gb|AAT69261.1| homeobox protein sine oculis six 4/5 [Macrostomum lignano]
          Length = 38

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 29/38 (76%)

Query: 150 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 187
           CFKEKSR  L++ Y  N YP+P EK++LA +TGLT TQ
Sbjct: 1   CFKEKSRQALKECYKQNRYPTPEEKKQLASSTGLTMTQ 38



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 29/38 (76%)

Query: 340 CFKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQ 377
           CFKEKSR  L++ Y  N YP+P EK++LA +TGLT TQ
Sbjct: 1   CFKEKSRQALKECYKQNRYPTPEEKKQLASSTGLTMTQ 38


>gi|349802441|gb|AEQ16693.1| hypothetical protein [Pipa carvalhoi]
          Length = 130

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 33/44 (75%), Gaps = 2/44 (4%)

Query: 347 SVLRDWYTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +++R W+ H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 76  NIMRAWFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 119



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 2/41 (4%)

Query: 157 SVLRDWYTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +++R W+ H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 76  NIMRAWFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 116


>gi|302887122|ref|XP_003042450.1| hypothetical protein NECHADRAFT_51835 [Nectria haematococca mpVI
           77-13-4]
 gi|256723360|gb|EEU36737.1| hypothetical protein NECHADRAFT_51835 [Nectria haematococca mpVI
           77-13-4]
          Length = 631

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 336 ETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           +T + F +++  +L+ W   ++  PYP+ +EK  L   TGLT TQVSNWF N R++ RA 
Sbjct: 16  KTGHRFSKEALQILKRWLALHSRYPYPAEQEKELLQRQTGLTKTQVSNWFTNTRRKRRAQ 75

Query: 393 EQKDGSVHSFRVNIG 407
            Q++   H+     G
Sbjct: 76  PQRNPFSHTDNTQTG 90



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 146 ETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSS------AN 196
           +T + F +++  +L+ W   ++  PYP+ +EK  L   TGLT TQVSNWF++      A 
Sbjct: 16  KTGHRFSKEALQILKRWLALHSRYPYPAEQEKELLQRQTGLTKTQVSNWFTNTRRKRRAQ 75

Query: 197 ITSSPNTSTSTASISPI 213
              +P + T      PI
Sbjct: 76  PQRNPFSHTDNTQTGPI 92


>gi|410222178|gb|JAA08308.1| Meis homeobox 3 [Pan troglodytes]
          Length = 421

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 10/135 (7%)

Query: 96  KSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKS 155
           + IF KV T+    W     + +S + ++  +   +    P PR  W     S C +   
Sbjct: 266 RGIFPKVATNIMRAWLFQHLSRRSDAPVLPDVCLGLGSPSPGPR--WARPWGSDCGR-PG 322

Query: 156 RSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSSAN------ITSSPNTSTSTAS 209
           R     W+  +PYPS  +K++LA+ TGLT  QV+NWF +A       +    N +   A+
Sbjct: 323 RQSDSCWWPQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAA 382

Query: 210 ISP-ILPSFGFTQEQ 223
            SP   P  G+T+ Q
Sbjct: 383 FSPEGQPIGGYTETQ 397



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%)

Query: 352 WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR------DRAAEQKDGSVHSFRVN 405
           W+  +PYPS  +K++LA+ TGLT  QV+NWF N R+R      D++     G+  S    
Sbjct: 329 WWPQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQ 388

Query: 406 -IGGDSKTQ 413
            IGG ++TQ
Sbjct: 389 PIGGYTETQ 397


>gi|57863281|ref|NP_064545.1| homeobox protein Meis3 isoform 1 [Homo sapiens]
 gi|19263507|gb|AAH25404.1| Meis homeobox 3 [Homo sapiens]
 gi|119577886|gb|EAW57482.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_c [Homo sapiens]
 gi|158260923|dbj|BAF82639.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 10/135 (7%)

Query: 96  KSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKS 155
           + IF KV T+    W     + +S + ++  +   +    P PR  W     S C +   
Sbjct: 266 RGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPR--WARPWGSDCGR-PG 322

Query: 156 RSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFSSAN------ITSSPNTSTSTAS 209
           R     W+  +PYPS  +K++LA+ TGLT  QV+NWF +A       +    N +   A+
Sbjct: 323 RQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAA 382

Query: 210 ISP-ILPSFGFTQEQ 223
            SP   P  G+T+ Q
Sbjct: 383 FSPEGQPIGGYTETQ 397



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%)

Query: 352 WYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR------DRAAEQKDGSVHSFRVN 405
           W+  +PYPS  +K++LA+ TGLT  QV+NWF N R+R      D++     G+  S    
Sbjct: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQ 388

Query: 406 -IGGDSKTQ 413
            IGG ++TQ
Sbjct: 389 PIGGYTETQ 397


>gi|348550710|ref|XP_003461174.1| PREDICTED: hypothetical protein LOC100726786 [Cavia porcellus]
          Length = 582

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 4/161 (2%)

Query: 227 VCEVLQQS-GNIERLGRFLWSLPACEKLHKNESVLKAKAMVAFHRGNFKDLYRILESHQF 285
           +C  LQ     ++ L   +   P   +   N  V    A V   +G  +   R+LE    
Sbjct: 28  LCRDLQDDLAQVQPLVAAVLESPLRPRFLDNADVTLVCARVLVQQGQPQVACRLLEGCHV 87

Query: 286 SPHNHPKLQALWLKAHY-VEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEK 344
            P    +L  LW   HY ++  +L    L  V K+R R++ P P  +      S  F  +
Sbjct: 88  -PGGSQELVQLWNDIHYHLDRRRLGVTTLTPVQKFRCRKRNPPPPALSPEGPKSRNFPRE 146

Query: 345 SRSVLRDWYTH-NPYPSPREKRELAEATGLTTTQVSNWFKN 384
            R  L D+ +  N  PS  ++  LA  TGLTT QV NWF N
Sbjct: 147 VRQRLWDFVSAVNSNPSKADRENLALETGLTTGQVYNWFAN 187



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 121 SIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAE 179
           + +  + K+R R++ P P  +      S  F  + R  L D+ +  N  PS  ++  LA 
Sbjct: 113 TTLTPVQKFRCRKRNPPPPALSPEGPKSRNFPREVRQRLWDFVSAVNSNPSKADRENLAL 172

Query: 180 ATGLTTTQVSNWFS 193
            TGLTT QV NWF+
Sbjct: 173 ETGLTTGQVYNWFA 186


>gi|242088147|ref|XP_002439906.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
 gi|241945191|gb|EES18336.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
          Length = 570

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 15/87 (17%)

Query: 305 AEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSP 361
           A  LRG  + A G+         P  IW          E++ SVLR W + H  +PYP+ 
Sbjct: 305 AGLLRGNNVNAFGQ---------PHNIW---RPQRGLPERAVSVLRSWLFEHFLHPYPTD 352

Query: 362 REKRELAEATGLTTTQVSNWFKNRRQR 388
            +K+ LA+ TGLT  QVSNWF N R R
Sbjct: 353 SDKQMLAKQTGLTRNQVSNWFINARVR 379



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 103 VTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 162
           V +   + K  +  +        +++      F  P  IW          E++ SVLR W
Sbjct: 284 VVANDGIGKDDMANFALMGGGAGLLRGNNVNAFGQPHNIW---RPQRGLPERAVSVLRSW 340

Query: 163 -YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 341 LFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 378


>gi|410951067|ref|XP_003982223.1| PREDICTED: pre-B-cell leukemia transcription factor 4, partial
           [Felis catus]
          Length = 339

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 6/74 (8%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K  LA   G+T +QVSNWF N+R   +++    Q
Sbjct: 187 FSKRATEVLNEYFYSHLNNPYPSEEAKERLARKGGITVSQVSNWFGNKRIRYKKNMGKFQ 246

Query: 395 KDGSVHSFRVNIGG 408
           ++ ++++ ++ +GG
Sbjct: 247 EEATIYTTKMAVGG 260



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K  LA   G+T +QVSNWF +  I
Sbjct: 187 FSKRATEVLNEYFYSHLNNPYPSEEAKERLARKGGITVSQVSNWFGNKRI 236


>gi|406865703|gb|EKD18744.1| homeobox and C2H2 transcription factor [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 771

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 19/92 (20%)

Query: 302 YVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPY 358
           +V+ EK  G P+  V   + +R                   ++   VL+ W +   H+PY
Sbjct: 242 FVQGEKKEGEPVVKVTAVKSKRSI----------------SKQDIRVLKAWLSEHRHSPY 285

Query: 359 PSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           PS  EK EL   TGLT  Q+SNWF N R+R R
Sbjct: 286 PSEDEKLELRATTGLTILQISNWFANARRRQR 317



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           VL+ W +   H+PYPS  EK EL   TGLT  Q+SNWF++A
Sbjct: 272 VLKAWLSEHRHSPYPSEDEKLELRATTGLTILQISNWFANA 312


>gi|366999258|ref|XP_003684365.1| hypothetical protein TPHA_0B02580 [Tetrapisispora phaffii CBS 4417]
 gi|357522661|emb|CCE61931.1| hypothetical protein TPHA_0B02580 [Tetrapisispora phaffii CBS 4417]
          Length = 264

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             ++S  VL  W  +   NPYP+P+EK EL E TGL+  Q+SNWF N R+R
Sbjct: 160 LPKQSVDVLNKWLLNHLGNPYPTPKEKEELLELTGLSKIQLSNWFINVRRR 210



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 151 FKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWF 192
             ++S  VL  W  +   NPYP+P+EK EL E TGL+  Q+SNWF
Sbjct: 160 LPKQSVDVLNKWLLNHLGNPYPTPKEKEELLELTGLSKIQLSNWF 204


>gi|401837582|gb|EJT41493.1| TOS8-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 274

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF N R+R   A   D
Sbjct: 206 ILNQWLLEHIHNPYPTVQEKRDLLAKTGLTKLQISNWFINARRRKIFAGHND 257



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF +A
Sbjct: 206 ILNQWLLEHIHNPYPTVQEKRDLLAKTGLTKLQISNWFINA 246


>gi|242059233|ref|XP_002458762.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
 gi|241930737|gb|EES03882.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
          Length = 593

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREK 364
           L G    A+ +      F  P  IW  +       E++ SVLR W + H  +PYP+  +K
Sbjct: 325 LAGGSAAALQRASSMAAFGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDK 381

Query: 365 RELAEATGLTTTQVSNWFKNRRQR 388
           + LA+ TGLT  QVSNWF N R R
Sbjct: 382 QMLAKQTGLTRNQVSNWFINARVR 405



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 342 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 398

Query: 192 FSSANI 197
           F +A +
Sbjct: 399 FINARV 404


>gi|350636681|gb|EHA25040.1| hypothetical protein ASPNIDRAFT_129033 [Aspergillus niger ATCC 1015]
          Length = 1330

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 341  FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
            F  K   +LRDW     H PYP+  +K   A+ TGLT  Q+S WF N R+R R   +   
Sbjct: 965  FSRKGAKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMVHRTSR 1024

Query: 398  SVHSFR 403
                FR
Sbjct: 1025 PSQIFR 1030



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 151  FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA-------NITSS 200
            F  K   +LRDW     H PYP+  +K   A+ TGLT  Q+S WF++A       + TS 
Sbjct: 965  FSRKGAKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMVHRTSR 1024

Query: 201  PNTSTSTASISPILPSFGFT 220
            P+    + S  PI  S   T
Sbjct: 1025 PSQIFRSGSPMPIARSVALT 1044


>gi|363749185|ref|XP_003644810.1| hypothetical protein Ecym_2247 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888443|gb|AET37993.1| Hypothetical protein Ecym_2247 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 349

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)

Query: 349 LRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           LRD Y  NPYPSP+EK+EL + TGL   Q+SNWF N R+R
Sbjct: 242 LRDHYD-NPYPSPQEKKELLKQTGLNPVQLSNWFINVRRR 280



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 159 LRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           LRD Y  NPYPSP+EK+EL + TGL   Q+SNWF
Sbjct: 242 LRDHYD-NPYPSPQEKKELLKQTGLNPVQLSNWF 274


>gi|259486398|tpe|CBF84202.1| TPA: Putative transcription factor with C2H2 and Zn(2)-Cys(6) DNA
           binding domain (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 593

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  K   VLRDW+  N   PYPS  EK  LA  TG +  ++S WF N R+R +  +Q   
Sbjct: 225 FVRKGARVLRDWFYQNEHCPYPSEEEKARLAAETGFSRQRISTWFANARRRHKQQKQART 284

Query: 398 SVHSFRVN 405
           S   FR  
Sbjct: 285 STRVFRAG 292



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F  K   VLRDW+  N   PYPS  EK  LA  TG +  ++S WF++A
Sbjct: 225 FVRKGARVLRDWFYQNEHCPYPSEEEKARLAAETGFSRQRISTWFANA 272


>gi|32879989|gb|AAP88825.1| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
          Length = 349

 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|300796649|ref|NP_001177983.1| anomalous homeobox protein [Homo sapiens]
 gi|395406804|sp|E9PGG2.1|ANHX_HUMAN RecName: Full=Anomalous homeobox protein
          Length = 379

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|119575172|gb|EAW54785.1| hCG2007354 [Homo sapiens]
          Length = 379

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|340522182|gb|EGR52415.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1012

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F   +  VLR+W T N   PYPS  +K  LA  TGL  TQ+ NW  N R+R +    +  
Sbjct: 126 FSRDTLRVLRNWLTSNHRHPYPSNEDKETLARQTGLNKTQIGNWIANARRRGKVRAPRST 185

Query: 398 SVHSFRVNIGGD 409
           S    R+ IG D
Sbjct: 186 SSSPGRLPIGID 197



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA---NITSSPNTS 204
           F   +  VLR+W T N   PYPS  +K  LA  TGL  TQ+ NW ++A       +P ++
Sbjct: 126 FSRDTLRVLRNWLTSNHRHPYPSNEDKETLARQTGLNKTQIGNWIANARRRGKVRAPRST 185

Query: 205 TSTASISPI 213
           +S+    PI
Sbjct: 186 SSSPGRLPI 194


>gi|397487093|ref|XP_003814645.1| PREDICTED: uncharacterized protein LOC100969028 [Pan paniscus]
          Length = 379

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|149027938|gb|EDL83389.1| pre-B-cell leukemia transcription factor 2, isoform CRA_d [Rattus
           norvegicus]
          Length = 335

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVAQGGHSRT 272



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|355709419|gb|AES03585.1| pre-B-cell leukemia homeobox 2 [Mustela putorius furo]
          Length = 376

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 228 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 287

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 288 EEANIYAVKTAVSVTQGGHSRT 309



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 228 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 277


>gi|148694854|gb|EDL26801.1| pre B-cell leukemia transcription factor 2, isoform CRA_a [Mus
           musculus]
          Length = 395

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|16552829|dbj|BAB71386.1| unnamed protein product [Homo sapiens]
          Length = 379

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|50288985|ref|XP_446922.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526231|emb|CAG59855.1| unnamed protein product [Candida glabrata]
          Length = 259

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 3/52 (5%)

Query: 348 VLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKD 396
           +L +W Y H  NPYP+P+EK EL+  TGLT  Q+SNWF N R+R   A+  D
Sbjct: 175 ILNEWLYDHINNPYPTPQEKMELSLKTGLTKIQLSNWFINVRRRKVFADYYD 226



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 3/38 (7%)

Query: 158 VLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWF 192
           +L +W Y H  NPYP+P+EK EL+  TGLT  Q+SNWF
Sbjct: 175 ILNEWLYDHINNPYPTPQEKMELSLKTGLTKIQLSNWF 212


>gi|408396207|gb|EKJ75370.1| hypothetical protein FPSE_04451 [Fusarium pseudograminearum CS3096]
          Length = 605

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           VLR+WY  N   PYPS  EK +LA+ +GL+ +QV NWF N R+R R A
Sbjct: 244 VLRNWYLSNLDHPYPSEEEKVDLAQQSGLSRSQVVNWFANSRRRHRLA 291



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           VLR+WY  N   PYPS  EK +LA+ +GL+ +QV NWF+++
Sbjct: 244 VLRNWYLSNLDHPYPSEEEKVDLAQQSGLSRSQVVNWFANS 284


>gi|357437501|ref|XP_003589026.1| BEL1-like homeodomain protein [Medicago truncatula]
 gi|355478074|gb|AES59277.1| BEL1-like homeodomain protein [Medicago truncatula]
          Length = 524

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E+S SVLRDW   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 433 ERSVSVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVR 481



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           E+S SVLRDW   N   PYP   EK  LA  +GLT +QVSNWF +A +
Sbjct: 433 ERSVSVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARV 480


>gi|11463941|dbj|BAB18584.1| CRKNOX2 [Ceratopteris richardii]
          Length = 430

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R +L DW+T +   PYPS  EK  LAE+TGL   Q++NWF N+R+R
Sbjct: 321 EARQMLLDWWTQHYKWPYPSEAEKTALAESTGLDQKQINNWFINQRKR 368



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R +L DW+T +   PYPS  EK  LAE+TGL   Q++NWF
Sbjct: 321 EARQMLLDWWTQHYKWPYPSEAEKTALAESTGLDQKQINNWF 362


>gi|402888245|ref|XP_003907482.1| PREDICTED: anomalous homeobox protein [Papio anubis]
          Length = 379

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYHLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVRVNTNPSKTERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRALPQ 197


>gi|149027936|gb|EDL83387.1| pre-B-cell leukemia transcription factor 2, isoform CRA_b [Rattus
           norvegicus]
          Length = 313

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 228

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 229 EEANIYAVKTAVSVAQGGHSRT 250



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 218


>gi|440639783|gb|ELR09702.1| hypothetical protein GMDG_04188, partial [Geomyces destructans
           20631-21]
          Length = 626

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 341 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA-AEQKD 396
           F +++RS+LR WY     NPYP+  EK EL   +GL  +Q+S W  N R+++RA A QK 
Sbjct: 156 FSKEARSILRTWYHEHRENPYPTSEEKDELVNMSGLKRSQISLWLANTRRKNRARANQKQ 215

Query: 397 GS 398
            +
Sbjct: 216 AA 217



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 151 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           F +++RS+LR WY     NPYP+  EK EL   +GL  +Q+S W ++
Sbjct: 156 FSKEARSILRTWYHEHRENPYPTSEEKDELVNMSGLKRSQISLWLAN 202


>gi|365760754|gb|EHN02450.1| Tos8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 291

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFR 403
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF N R+R   +   D  V++F+
Sbjct: 223 ILNQWLLEHIHNPYPTVQEKRDLLAKTGLTKLQISNWFINARRRKIFSGHND--VNNFK 279



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF +A
Sbjct: 223 ILNQWLLEHIHNPYPTVQEKRDLLAKTGLTKLQISNWFINA 263


>gi|297290530|ref|XP_002803729.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like, partial
           [Macaca mulatta]
          Length = 435

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 248 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 307

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 308 EEANIYAVKTAVSVTQGGHSRT 329



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 248 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 297


>gi|156848575|ref|XP_001647169.1| hypothetical protein Kpol_1036p56 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117853|gb|EDO19311.1| hypothetical protein Kpol_1036p56 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 265

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             + S  +L  W   +  NPYP+P+EK+EL + TGLT  Q+SNWF N R+R
Sbjct: 163 LPKNSVQILNQWLLNHLQNPYPTPQEKKELLKQTGLTKIQLSNWFINVRRR 213



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 151 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
             + S  +L  W   +  NPYP+P+EK+EL + TGLT  Q+SNWF
Sbjct: 163 LPKNSVQILNQWLLNHLQNPYPTPQEKKELLKQTGLTKIQLSNWF 207


>gi|403307772|ref|XP_003944357.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Saimiri
           boliviensis boliviensis]
          Length = 424

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 304

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 305 EEANIYAVKTAVSVTQGGHSRT 326



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 294


>gi|296197794|ref|XP_002746425.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Callithrix
           jacchus]
          Length = 430

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|358383525|gb|EHK21190.1| hypothetical protein TRIVIDRAFT_51881 [Trichoderma virens Gv29-8]
          Length = 210

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 5/65 (7%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVH 400
           +S  +L+ WYT N   PYPS  +K+EL+  TGL+  Q+S WF N R+RD  AE++   + 
Sbjct: 19  RSTQLLKQWYTSNSAWPYPSAEQKKELSHQTGLSVRQISQWFVNTRRRD--AERQGNEIL 76

Query: 401 SFRVN 405
              +N
Sbjct: 77  DSSIN 81



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           +S  +L+ WYT N   PYPS  +K+EL+  TGL+  Q+S WF
Sbjct: 19  RSTQLLKQWYTSNSAWPYPSAEQKKELSHQTGLSVRQISQWF 60


>gi|73972378|ref|XP_850252.1| PREDICTED: pre-B-cell leukemia transcription factor 2 isoform 1
           [Canis lupus familiaris]
          Length = 426

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 247 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 306

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 307 EEANIYAVKTAVSVTQGGHSRT 328



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 247 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 296


>gi|402866552|ref|XP_003897443.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Papio
           anubis]
 gi|384939978|gb|AFI33594.1| pre-B-cell leukemia transcription factor 2 [Macaca mulatta]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|332246099|ref|XP_003272187.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Nomascus
           leucogenys]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|35313|emb|CAA42503.1| homeobox protein [Homo sapiens]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|397519333|ref|XP_003829816.1| PREDICTED: LOW QUALITY PROTEIN: pre-B-cell leukemia transcription
           factor 2 [Pan paniscus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|27436887|ref|NP_002577.2| pre-B-cell leukemia transcription factor 2 [Homo sapiens]
 gi|114606596|ref|XP_001163141.1| PREDICTED: pre-B-cell leukemia transcription factor 2 isoform 4
           [Pan troglodytes]
 gi|1352729|sp|P40425.2|PBX2_HUMAN RecName: Full=Pre-B-cell leukemia transcription factor 2; AltName:
           Full=Homeobox protein PBX2; AltName: Full=Protein G17
 gi|561658|dbj|BAA05957.1| HOX12 protein [Homo sapiens]
 gi|634053|emb|CAA56717.1| PBX2 [Homo sapiens]
 gi|1841549|gb|AAB47490.1| homeobox PBX2 gene [Homo sapiens]
 gi|52078432|gb|AAH82261.1| Pre-B-cell leukemia homeobox 2 [Homo sapiens]
 gi|119624018|gb|EAX03613.1| hCG2001537, isoform CRA_b [Homo sapiens]
 gi|119624027|gb|EAX03622.1| hCG2039588 [Homo sapiens]
 gi|208967120|dbj|BAG73574.1| pre-B-cell leukemia homeobox 2 [synthetic construct]
 gi|312151098|gb|ADQ32061.1| pre-B-cell leukemia homeobox 2 [synthetic construct]
 gi|410226540|gb|JAA10489.1| pre-B-cell leukemia homeobox 2 [Pan troglodytes]
 gi|410302296|gb|JAA29748.1| pre-B-cell leukemia homeobox 2 [Pan troglodytes]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|355748447|gb|EHH52930.1| hypothetical protein EGM_13467, partial [Macaca fascicularis]
          Length = 380

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 201 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 260

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 261 EEANIYAVKTAVSVTQGGHSRT 282



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 201 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 250


>gi|178056657|ref|NP_001116629.1| pre-B-cell leukemia transcription factor 2 [Sus scrofa]
 gi|410958834|ref|XP_003986019.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Felis catus]
 gi|147225132|emb|CAN13260.1| pre-B-cell leukemia transcription factor 2 [Sus scrofa]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|162138262|gb|ABX82835.1| pre-B-cell leukemia homeobox 2 protein [Sus scrofa]
          Length = 370

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVTQGGHSRT 272



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|380799999|gb|AFE71875.1| pre-B-cell leukemia transcription factor 2, partial [Macaca
           mulatta]
          Length = 402

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 223 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 282

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 283 EEANIYAVKTAVSVTQGGHSRT 304



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 223 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 272


>gi|355561570|gb|EHH18202.1| hypothetical protein EGK_14755, partial [Macaca mulatta]
          Length = 393

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 214 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 273

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 274 EEANIYAVKTAVSVTQGGHSRT 295



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 214 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 263


>gi|119624023|gb|EAX03618.1| hCG2001537, isoform CRA_g [Homo sapiens]
          Length = 370

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVTQGGHSRT 272



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|326496765|dbj|BAJ98409.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 26/132 (19%)

Query: 86  VLSYQALASH-KSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVR------------ 132
            L+ + +A H KSI + +++  +   K PVK    SS+  +I  + +             
Sbjct: 275 ALALRVMAKHFKSIKEMILSQLRNTSKMPVK---GSSMSKDITIFGLGGGGGAPVGGFQR 331

Query: 133 ----RKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTT 185
                 F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT 
Sbjct: 332 GSSVNGFGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTR 388

Query: 186 TQVSNWFSSANI 197
            QVSNWF +A +
Sbjct: 389 NQVSNWFINARV 400



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 338 FGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 394

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 395 FINARVR 401


>gi|149027937|gb|EDL83388.1| pre-B-cell leukemia transcription factor 2, isoform CRA_c [Rattus
           norvegicus]
          Length = 370

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVAQGGHSRT 272



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|432089470|gb|ELK23412.1| Pre-B-cell leukemia transcription factor 2 [Myotis davidii]
          Length = 370

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVTQGGHSRT 272



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|379056392|ref|NP_001243812.1| pre-B-cell leukemia transcription factor 2 [Bos taurus]
 gi|296474296|tpg|DAA16411.1| TPA: pre-B-cell leukemia transcription factor 2 [Bos taurus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|417400813|gb|JAA47329.1| Putative transcription factor pbx [Desmodus rotundus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|291395846|ref|XP_002714348.1| PREDICTED: pre-B-cell leukemia homeobox 3 [Oryctolagus cuniculus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|426352610|ref|XP_004043804.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Gorilla
           gorilla gorilla]
          Length = 348

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 228

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 229 EEANIYAVKTAVSVTQGGHSRT 250



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 218


>gi|50657366|ref|NP_001002828.1| pre-B-cell leukemia homeobox 2 [Rattus norvegicus]
 gi|46237580|emb|CAE83959.1| pre-B-cell leukemia transcription factor 2 [Rattus norvegicus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|338718627|ref|XP_001917871.2| PREDICTED: LOW QUALITY PROTEIN: pre-B-cell leukemia transcription
           factor 2-like [Equus caballus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|395832074|ref|XP_003789102.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Otolemur
           garnettii]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|301788548|ref|XP_002929693.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like, partial
           [Ailuropoda melanoleuca]
          Length = 396

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 217 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 276

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 277 EEANIYAVKTAVSVTQGGHSRT 298



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 217 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 266


>gi|148694858|gb|EDL26805.1| pre B-cell leukemia transcription factor 2, isoform CRA_d [Mus
           musculus]
          Length = 370

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 250

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 251 EEANIYAVKTAVSVAQGGHSRT 272



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 240


>gi|344307208|ref|XP_003422274.1| PREDICTED: pre-B-cell leukemia transcription factor 2, partial
           [Loxodonta africana]
          Length = 369

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 190 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 249

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 250 EEANIYAVKTAVSVTQGGHSRT 271



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 190 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 239


>gi|431921532|gb|ELK18886.1| Pre-B-cell leukemia transcription factor 2 [Pteropus alecto]
          Length = 431

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|74198121|dbj|BAE35238.1| unnamed protein product [Mus musculus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|351713178|gb|EHB16097.1| Pre-B-cell leukemia transcription factor 2 [Heterocephalus glaber]
          Length = 555

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 376 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 435

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 436 EEANIYAVKTAVSVTQGGHSRT 457



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 376 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 425



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 6/51 (11%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T   VSNWF N+R R
Sbjct: 176 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGIT---VSNWFGNKRIR 223



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 6/50 (12%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T   VSNWF +  I
Sbjct: 176 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGIT---VSNWFGNKRI 222


>gi|348576434|ref|XP_003473992.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like [Cavia
           porcellus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVTQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|8567384|ref|NP_059491.1| pre-B-cell leukemia transcription factor 2 [Mus musculus]
 gi|3183113|sp|O35984.1|PBX2_MOUSE RecName: Full=Pre-B-cell leukemia transcription factor 2; AltName:
           Full=Homeobox protein PBX2
 gi|2432013|gb|AAB71193.1| PBX2 [Mus musculus]
 gi|2564949|gb|AAB82006.1| PBX2 [Mus musculus]
 gi|16307479|gb|AAH10287.1| Pre B-cell leukemia transcription factor 2 [Mus musculus]
 gi|38328431|gb|AAH62147.1| Pre B-cell leukemia transcription factor 2 [Mus musculus]
 gi|71060109|emb|CAJ18598.1| Pbx2 [Mus musculus]
 gi|148694855|gb|EDL26802.1| pre B-cell leukemia transcription factor 2, isoform CRA_b [Mus
           musculus]
 gi|148694856|gb|EDL26803.1| pre B-cell leukemia transcription factor 2, isoform CRA_b [Mus
           musculus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|327266582|ref|XP_003218083.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like [Anolis
           carolinensis]
          Length = 421

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 11/81 (13%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 304

Query: 395 KDGSVHSFRVNI-----GGDS 410
           ++ ++++ +  +     GGDS
Sbjct: 305 EEANIYAVKTAVSAAQSGGDS 325



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 294


>gi|149027935|gb|EDL83386.1| pre-B-cell leukemia transcription factor 2, isoform CRA_a [Rattus
           norvegicus]
          Length = 348

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 228

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 229 EEANIYAVKTAVSVAQGGHSRT 250



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 218


>gi|56388825|gb|AAH87615.1| Pre B-cell leukemia transcription factor 2 [Mus musculus]
          Length = 430

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|326496477|dbj|BAJ94700.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 321 FSQPHNIW---RPQRGLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 377

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 378 FINARVR 384



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW          E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 321 FSQPHNIW---RPQRGLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 377

Query: 192 FSSANI 197
           F +A +
Sbjct: 378 FINARV 383


>gi|317034149|ref|XP_001396098.2| homeobox and C2H2 transcription factor [Aspergillus niger CBS
           513.88]
          Length = 555

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 313 LGAVGKYRVRRKFPLPRTIWDGEETSYC----FKEKSRSVLRDWY---THNPYPSPREKR 365
           L  V ++     FP P    +  E        F  K   +LRDW     H PYP+  +K 
Sbjct: 158 LHGVTEWTEEELFPTPHAFPEKTEEDVQQKPRFSRKGAKILRDWLYRNQHAPYPTDEQKA 217

Query: 366 ELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFR 403
             A+ TGLT  Q+S WF N R+R R   +       FR
Sbjct: 218 AFAQQTGLTEKQISTWFANARRRHRMVHRTSRPSQIFR 255



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 151 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA-------NITSS 200
           F  K   +LRDW     H PYP+  +K   A+ TGLT  Q+S WF++A       + TS 
Sbjct: 190 FSRKGAKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMVHRTSR 249

Query: 201 PNTSTSTASISPILPSFGFT 220
           P+    + S  PI  S   T
Sbjct: 250 PSQIFRSGSPMPIARSAALT 269


>gi|74202460|dbj|BAE24825.1| unnamed protein product [Mus musculus]
          Length = 348

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 228

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 229 EEANIYAVKTAVSVAQGGHSRT 250



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 169 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 218


>gi|281345632|gb|EFB21216.1| hypothetical protein PANDA_019929 [Ailuropoda melanoleuca]
          Length = 357

 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 178 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 237

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 238 EEANIYAVKTAVSVTQGGHSRT 259



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 178 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 227


>gi|395745132|ref|XP_002824079.2| PREDICTED: uncharacterized protein LOC100432554 [Pongo abelii]
          Length = 395

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDRQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRAAEQ 394
           T LT  QV NWF N R+R RA  Q
Sbjct: 174 TSLTPEQVYNWFANYRRRQRAFPQ 197


>gi|444318077|ref|XP_004179696.1| hypothetical protein TBLA_0C03740 [Tetrapisispora blattae CBS 6284]
 gi|387512737|emb|CCH60177.1| hypothetical protein TBLA_0C03740 [Tetrapisispora blattae CBS 6284]
          Length = 293

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L DW   +  NPYP+P+EK EL   TGLT  Q+SNWF N R+R
Sbjct: 189 ILNDWLLNHLRNPYPTPKEKSELLVLTGLTKIQLSNWFINVRRR 232



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L DW   +  NPYP+P+EK EL   TGLT  Q+SNWF
Sbjct: 189 ILNDWLLNHLRNPYPTPKEKSELLVLTGLTKIQLSNWF 226


>gi|255930359|ref|XP_002556739.1| Pc06g01320 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581352|emb|CAP79125.1| Pc06g01320 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 846

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 3/53 (5%)

Query: 341 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           F  K+ ++L+ W   +  NPYP+ +E+ +L + TGLT TQ++NWF N R+R +
Sbjct: 168 FSRKAINILKGWLRDHNENPYPTEQERDDLKQLTGLTRTQIANWFANARRRGK 220



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 7/62 (11%)

Query: 151 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA----NITSSPNT 203
           F  K+ ++L+ W   +  NPYP+ +E+ +L + TGLT TQ++NWF++A     + +SP T
Sbjct: 168 FSRKAINILKGWLRDHNENPYPTEQERDDLKQLTGLTRTQIANWFANARRRGKVRASPGT 227

Query: 204 ST 205
           S+
Sbjct: 228 SS 229


>gi|339240813|ref|XP_003376332.1| Pre-B-cell leukemia transcription factor 1 [Trichinella spiralis]
 gi|316974958|gb|EFV58423.1| Pre-B-cell leukemia transcription factor 1 [Trichinella spiralis]
          Length = 369

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 212 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 262



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 212 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 261


>gi|366996018|ref|XP_003677772.1| hypothetical protein NCAS_0H01130 [Naumovozyma castellii CBS 4309]
 gi|342303642|emb|CCC71423.1| hypothetical protein NCAS_0H01130 [Naumovozyma castellii CBS 4309]
          Length = 280

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 297 WLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYC-----FKEKSRSVLRD 351
           + K   VEA      P           K PL R  +  ++ S+        ++   +L  
Sbjct: 84  YHKPQLVEASSALASPTTTTTTTNNNTKLPLNRKNFQKKQVSHNNRRSNLPKEMVQILNT 143

Query: 352 W---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           W   +  NPYP+ +EKREL   TGLT  Q+SNWF N R+R
Sbjct: 144 WLLNHLQNPYPTSQEKRELLIKTGLTKVQLSNWFINVRRR 183



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)

Query: 134 KFPLPRTIWDGEETSYC-----FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTT 185
           K PL R  +  ++ S+        ++   +L  W   +  NPYP+ +EKREL   TGLT 
Sbjct: 111 KLPLNRKNFQKKQVSHNNRRSNLPKEMVQILNTWLLNHLQNPYPTSQEKRELLIKTGLTK 170

Query: 186 TQVSNWF 192
            Q+SNWF
Sbjct: 171 VQLSNWF 177


>gi|297677816|ref|XP_002816757.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Pongo
           abelii]
          Length = 412

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 226 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 285

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 286 EEANIYAVKTAVSVTQGGHSRT 307



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 226 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 275


>gi|195433108|ref|XP_002064557.1| GK23761 [Drosophila willistoni]
 gi|194160642|gb|EDW75543.1| GK23761 [Drosophila willistoni]
          Length = 324

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 334 GEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           G      F    +S+L+DW      NPYPS  EK++LA  TGLT TQ+ NWF N R++ +
Sbjct: 31  GRMAKRLFTPDIKSMLKDWLIRRRDNPYPSREEKKQLAGETGLTYTQICNWFANWRRKLK 90

Query: 391 AAEQK 395
            +E++
Sbjct: 91  NSERE 95



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 144 GEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQVSNWFSS 194
           G      F    +S+L+DW      NPYPS  EK++LA  TGLT TQ+ NWF++
Sbjct: 31  GRMAKRLFTPDIKSMLKDWLIRRRDNPYPSREEKKQLAGETGLTYTQICNWFAN 84


>gi|293330417|dbj|BAJ04689.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 580

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 324 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 380

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 381 FINARVR 387



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLR 160
           KV      + K  +  +        +++      F  P  IW  +       E++ SVLR
Sbjct: 290 KVAAGKDSLGKEDMANFGLMGGSAALMRGGNANAFSQPHNIWRPQR---GLPERAVSVLR 346

Query: 161 DW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 347 AWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 386


>gi|405975107|gb|EKC39699.1| Pre-B-cell leukemia transcription factor 4 [Crassostrea gigas]
          Length = 616

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 7/79 (8%)

Query: 317 GKYRVRRKFPLPRTIWDGEET-SYCFKE---KSRSVLRDWY---THNPYPSPREKRELAE 369
            ++ ++ KF   R   +G++  S  +K+   ++R VL +WY    +NPYPS  EK +LAE
Sbjct: 486 NQHPIKFKFKGQRYAENGQDAKSSNYKQLHPQARRVLGEWYDVHMNNPYPSDEEKSQLAE 545

Query: 370 ATGLTTTQVSNWFKNRRQR 388
             G+T  QV +WF N+R R
Sbjct: 546 RAGITEQQVKSWFANKRSR 564



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 9/88 (10%)

Query: 114 VKTYQSSSIIINIIKYRVRRKFPLPRTIWDGEET-SYCFKE---KSRSVLRDWY---THN 166
           V+ Y + SI  N  ++ ++ KF   R   +G++  S  +K+   ++R VL +WY    +N
Sbjct: 475 VRNYNTLSITGN--QHPIKFKFKGQRYAENGQDAKSSNYKQLHPQARRVLGEWYDVHMNN 532

Query: 167 PYPSPREKRELAEATGLTTTQVSNWFSS 194
           PYPS  EK +LAE  G+T  QV +WF++
Sbjct: 533 PYPSDEEKSQLAERAGITEQQVKSWFAN 560



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFRV 404
           +L  WY  +   PYPS  E  +LAE T L+  Q+  W  N+R R+       G+ H  + 
Sbjct: 433 ILSKWYNEHIRYPYPSDLEVEQLAEQTELSPQQIKKWMANKRVRNYNTLSITGNQHPIKF 492

Query: 405 NIGG 408
              G
Sbjct: 493 KFKG 496


>gi|115464243|ref|NP_001055721.1| Os05g0455200 [Oryza sativa Japonica Group]
 gi|53749351|gb|AAU90210.1| putative homeodomain protein [Oryza sativa Japonica Group]
 gi|113579272|dbj|BAF17635.1| Os05g0455200 [Oryza sativa Japonica Group]
 gi|215704800|dbj|BAG94828.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 580

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 332 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 388

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 389 FINARVR 395



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 332 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 388

Query: 192 FSSANI 197
           F +A +
Sbjct: 389 FINARV 394


>gi|222631815|gb|EEE63947.1| hypothetical protein OsJ_18772 [Oryza sativa Japonica Group]
          Length = 603

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 355 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 411

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 412 FINARVR 418



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 355 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 411

Query: 192 FSSANI 197
           F +A +
Sbjct: 412 FINARV 417


>gi|125552568|gb|EAY98277.1| hypothetical protein OsI_20184 [Oryza sativa Indica Group]
          Length = 600

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 353 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 409

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 410 FINARVR 416



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 353 FSQPHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNW 409

Query: 192 FSSANI 197
           F +A +
Sbjct: 410 FINARV 415


>gi|260183698|gb|ACX35971.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 25/131 (19%)

Query: 86  VLSYQALASH-KSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVR------------ 132
            L+ + +A H K+I + +++  +   K PVK    SS+  +I  + +             
Sbjct: 275 ALALRVMAKHFKTIKEMILSQLRNTSKMPVK---GSSMSKDITIFGLGGGGAPVGGFQRG 331

Query: 133 ---RKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTT 186
                F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  
Sbjct: 332 SSVNGFGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRN 388

Query: 187 QVSNWFSSANI 197
           QVSNWF +A +
Sbjct: 389 QVSNWFINARV 399



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 337 FGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 393

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 394 FINARVR 400


>gi|290350518|dbj|BAI78229.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 423 FINARVR 429



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 192 FSSANI 197
           F +A +
Sbjct: 423 FINARV 428


>gi|134080840|emb|CAK41399.1| unnamed protein product [Aspergillus niger]
          Length = 570

 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 341 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  K   +LRDW     H PYP+  +K   A+ TGLT  Q+S WF N R+R R   +   
Sbjct: 205 FSRKGAKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMVHRTSR 264

Query: 398 SVHSFR 403
               FR
Sbjct: 265 PSQIFR 270



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 151 FKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA-------NITSS 200
           F  K   +LRDW     H PYP+  +K   A+ TGLT  Q+S WF++A       + TS 
Sbjct: 205 FSRKGAKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMVHRTSR 264

Query: 201 PNTSTSTASISPILPSFGFT 220
           P+    + S  PI  S   T
Sbjct: 265 PSQIFRSGSPMPIARSAALT 284


>gi|159492484|gb|ABW97428.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350520|dbj|BAI78230.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350522|dbj|BAI78231.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 423 FINARVR 429



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 192 FSSANI 197
           F +A +
Sbjct: 423 FINARV 428


>gi|290350500|dbj|BAI78220.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|290350494|dbj|BAI78217.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|290350482|dbj|BAI78211.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350498|dbj|BAI78219.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350502|dbj|BAI78221.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350504|dbj|BAI78222.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350506|dbj|BAI78223.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|290350468|dbj|BAI78204.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350470|dbj|BAI78205.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350496|dbj|BAI78218.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|159492488|gb|ABW97430.1| putative transcription factor qSH-1 [Oryza nivara]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|159492486|gb|ABW97429.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|125528380|gb|EAY76494.1| hypothetical protein OsI_04434 [Oryza sativa Indica Group]
 gi|159492448|gb|ABW97410.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492452|gb|ABW97412.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492460|gb|ABW97416.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492490|gb|ABW97431.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350434|dbj|BAI78187.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350448|dbj|BAI78194.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350450|dbj|BAI78195.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350454|dbj|BAI78197.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350456|dbj|BAI78198.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350514|dbj|BAI78227.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|19352101|dbj|BAB85942.1| qSH-1 [Oryza sativa Indica Group]
 gi|19352105|dbj|BAB85944.1| qSH-1 [Oryza sativa Indica Group]
 gi|290350444|dbj|BAI78192.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|115441049|ref|NP_001044804.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|15408891|dbj|BAB64282.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352103|dbj|BAB85943.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352107|dbj|BAB85945.1| qSH-1 [Oryza sativa Japonica Group]
 gi|113534335|dbj|BAF06718.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|125572633|gb|EAZ14148.1| hypothetical protein OsJ_04077 [Oryza sativa Japonica Group]
 gi|159492450|gb|ABW97411.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492454|gb|ABW97413.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492456|gb|ABW97414.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492458|gb|ABW97415.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492462|gb|ABW97417.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492464|gb|ABW97418.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492466|gb|ABW97419.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492468|gb|ABW97420.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492470|gb|ABW97421.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492472|gb|ABW97422.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492474|gb|ABW97423.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492476|gb|ABW97424.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492480|gb|ABW97426.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|159492495|gb|ABW97433.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|159492497|gb|ABW97434.1| putative transcription factor qSH-1 [Oryza nivara x Oryza
           rufipogon]
 gi|290350396|dbj|BAI78168.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350398|dbj|BAI78169.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350400|dbj|BAI78170.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350402|dbj|BAI78171.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350404|dbj|BAI78172.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350406|dbj|BAI78173.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350408|dbj|BAI78174.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350410|dbj|BAI78175.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350412|dbj|BAI78176.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350414|dbj|BAI78177.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350416|dbj|BAI78178.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350418|dbj|BAI78179.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350420|dbj|BAI78180.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350422|dbj|BAI78181.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350424|dbj|BAI78182.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350426|dbj|BAI78183.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350428|dbj|BAI78184.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350430|dbj|BAI78185.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350432|dbj|BAI78186.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350436|dbj|BAI78188.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350438|dbj|BAI78189.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350440|dbj|BAI78190.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350442|dbj|BAI78191.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350446|dbj|BAI78193.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350452|dbj|BAI78196.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350458|dbj|BAI78199.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350460|dbj|BAI78200.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350462|dbj|BAI78201.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350464|dbj|BAI78202.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350466|dbj|BAI78203.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350476|dbj|BAI78208.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350478|dbj|BAI78209.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350480|dbj|BAI78210.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350486|dbj|BAI78213.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350488|dbj|BAI78214.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350492|dbj|BAI78216.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350510|dbj|BAI78225.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350512|dbj|BAI78226.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350516|dbj|BAI78228.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350524|dbj|BAI78232.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350526|dbj|BAI78233.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|426398194|ref|XP_004065279.1| PREDICTED: anomalous homeobox protein-like, partial [Gorilla
           gorilla gorilla]
          Length = 397

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 3/141 (2%)

Query: 253 LHKNESVLKAKAMVAFHRGNFKDLYRILESHQFSPHNHPKLQALWLKAHY-VEAEKLRGR 311
           L  N  V  A A V   +   +   R+LE  Q  P    +L  LW   HY +   +L   
Sbjct: 55  LLDNADVALACARVLDQQEQQQAACRLLEGCQV-PGGSQELVQLWNDIHYRLVMRRLGVA 113

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH-NPYPSPREKRELAEA 370
            L  V K+R R++ P P ++      S  F  + R  L ++    N  PS  E+  LA  
Sbjct: 114 ALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVRERLHNFAVGVNTNPSKAERENLALE 173

Query: 371 TGLTTTQVSNWFKNRRQRDRA 391
           T LT  QV NWF N R+R RA
Sbjct: 174 TSLTPEQVYNWFANYRRRQRA 194


>gi|344239144|gb|EGV95247.1| Pre-B-cell leukemia transcription factor 2 [Cricetulus griseus]
          Length = 240

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 61  FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 120

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 121 EEANIYAVKTAVSVAQGGHSRT 142



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 61  FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 110


>gi|290350508|dbj|BAI78224.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|290350484|dbj|BAI78212.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|159492493|gb|ABW97432.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350472|dbj|BAI78206.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350490|dbj|BAI78215.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|426251172|ref|XP_004023413.1| PREDICTED: LOW QUALITY PROTEIN: pre-B-cell leukemia transcription
           factor 2 [Ovis aries]
          Length = 527

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 348 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 407

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 408 EEANIYAVKTAVSVTQGGHSRT 429



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 348 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 397


>gi|357125864|ref|XP_003564609.1| PREDICTED: BEL1-like homeodomain protein 6-like [Brachypodium
           distachyon]
          Length = 612

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E+S SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 367 FGQPNNIWRPQRG---LPERSVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 423

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 424 FINARVR 430



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E+S SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 367 FGQPNNIWRPQRG---LPERSVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 423

Query: 192 FSSANI 197
           F +A +
Sbjct: 424 FINARV 429


>gi|403218413|emb|CCK72903.1| hypothetical protein KNAG_0M00500 [Kazachstania naganishii CBS
           8797]
          Length = 298

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 333 DGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           D +++ Y   + +  +L  W   + HNPYP+ +EKREL   TGL+  Q+SNWF N R+R
Sbjct: 175 DRKQSRYNLPKDTVLILNRWLLDHLHNPYPTSQEKRELLIKTGLSKIQLSNWFINVRRR 233



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 143 DGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           D +++ Y   + +  +L  W   + HNPYP+ +EKREL   TGL+  Q+SNWF
Sbjct: 175 DRKQSRYNLPKDTVLILNRWLLDHLHNPYPTSQEKRELLIKTGLSKIQLSNWF 227


>gi|290984520|ref|XP_002674975.1| homeobox domain-containing protein [Naegleria gruberi]
 gi|284088568|gb|EFC42231.1| homeobox domain-containing protein [Naegleria gruberi]
          Length = 412

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 348 VLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           VL DW+     NPYPS  EK+ L + T L+  Q++NWF N+R R +   QK+G
Sbjct: 64  VLNDWFFANLQNPYPSEDEKKGLVDQTTLSLLQINNWFSNKRVRYKRKMQKEG 116



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 158 VLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           VL DW+     NPYPS  EK+ L + T L+  Q++NWFS+  +
Sbjct: 64  VLNDWFFANLQNPYPSEDEKKGLVDQTTLSLLQINNWFSNKRV 106


>gi|119182070|ref|XP_001242193.1| hypothetical protein CIMG_06089 [Coccidioides immitis RS]
          Length = 555

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           VL+ W   N   PYP+ +EK ELAE T LT TQVS WF N R+R R A
Sbjct: 103 VLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRRGRHA 150



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           VL+ W   N   PYP+ +EK ELAE T LT TQVS WF++A
Sbjct: 103 VLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANA 143


>gi|159492478|gb|ABW97425.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 423 FINARVR 429



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 366 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 422

Query: 192 FSSANI 197
           F +A +
Sbjct: 423 FINARV 428


>gi|15215913|emb|CAC51426.1| H1 gene [Arabidopsis thaliana]
          Length = 469

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           EKS SVLR+W   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 377 EKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVR 425



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 78  QAHPQLAL-VLSYQALASHKSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVRRKFP 136
           Q H + AL  +S+      + I  K+++    + +   KT ++S    + +  +++RK  
Sbjct: 307 QLHTRFALQTVSFLYKNLRERICKKIISMGSVLERGKDKTQETSMFHQHCLLQQLKRK-- 364

Query: 137 LPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFS 193
               IW  +       EKS SVLR+W   N   PYP   EK  LA  +GLT +QVSNWF 
Sbjct: 365 -NHQIWRPQRG---LPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFI 420

Query: 194 SANI 197
           +A +
Sbjct: 421 NARV 424


>gi|159492482|gb|ABW97427.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 608

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 360 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 416

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 417 FINARVR 423



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 360 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 416

Query: 192 FSSANI 197
           F +A +
Sbjct: 417 FINARV 422


>gi|15234005|ref|NP_195024.1| homeobox protein ATH1 [Arabidopsis thaliana]
 gi|1351999|sp|P48731.1|ATH1_ARATH RecName: Full=Homeobox protein ATH1
 gi|685234|emb|CAA56426.1| H1 [Arabidopsis thaliana]
 gi|3688179|emb|CAA21207.1| homeobox gene ATH1 [Arabidopsis thaliana]
 gi|7270245|emb|CAB80015.1| homeobox gene ATH1 [Arabidopsis thaliana]
 gi|18176168|gb|AAL59996.1| putative homeobox gene ATH1 protein [Arabidopsis thaliana]
 gi|20465955|gb|AAM20163.1| putative homeobox gene ATH1 protein [Arabidopsis thaliana]
 gi|332660754|gb|AEE86154.1| homeobox protein ATH1 [Arabidopsis thaliana]
          Length = 473

 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           EKS SVLR+W   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 381 EKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVR 429



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           EKS SVLR+W   N   PYP   EK  LA  +GLT +QVSNWF +A +
Sbjct: 381 EKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARV 428


>gi|50795297|ref|XP_423764.1| PREDICTED: pre-B-cell leukemia transcription factor 3 isoform 2
           [Gallus gallus]
          Length = 431

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 295



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 245 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 294


>gi|50554269|ref|XP_504543.1| YALI0E29271p [Yarrowia lipolytica]
 gi|49650412|emb|CAG80147.1| YALI0E29271p [Yarrowia lipolytica CLIB122]
          Length = 510

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 17/80 (21%)

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQV 378
           RR+  LP+++               S+LR+W   +  +PYPS  EK  L + TGLT +Q+
Sbjct: 428 RRRGNLPKSV--------------TSILREWLNDHISHPYPSEYEKSLLLQQTGLTMSQL 473

Query: 379 SNWFKNRRQRDRAAEQKDGS 398
           SNWF N R+R   A Q+ G+
Sbjct: 474 SNWFINARRRQLPAMQQQGA 493



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 17/67 (25%)

Query: 132 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQV 188
           RR+  LP+++               S+LR+W   +  +PYPS  EK  L + TGLT +Q+
Sbjct: 428 RRRGNLPKSV--------------TSILREWLNDHISHPYPSEYEKSLLLQQTGLTMSQL 473

Query: 189 SNWFSSA 195
           SNWF +A
Sbjct: 474 SNWFINA 480


>gi|332854313|ref|XP_001137150.2| PREDICTED: pre-B-cell leukemia transcription factor 4 [Pan
           troglodytes]
          Length = 374

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTVSQVSNWFGNKRI 266

Query: 388 R 388
           R
Sbjct: 267 R 267



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTVSQVSNWFGNKRI 266


>gi|189305081|gb|ACD86392.1| pre-B cell leukemia transcription factor 4 [Gekko japonicus]
          Length = 423

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 237 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 287



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 237 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 286


>gi|327277002|ref|XP_003223255.1| PREDICTED: pre-B-cell leukemia transcription factor 3-like [Anolis
           carolinensis]
          Length = 419

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 233 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 283



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 233 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 282


>gi|290350474|dbj|BAI78207.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 610

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 421 FINARVR 427



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 135 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 191
           F  P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 364 FGQPHNIWRPQRG---LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 420

Query: 192 FSSANI 197
           F +A +
Sbjct: 421 FINARV 426


>gi|334326305|ref|XP_001368506.2| PREDICTED: pre-B-cell leukemia transcription factor 3-like
           [Monodelphis domestica]
          Length = 419

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 234 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 284



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 234 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 283


>gi|395512657|ref|XP_003760552.1| PREDICTED: pre-B-cell leukemia transcription factor 3-like
           [Sarcophilus harrisii]
          Length = 369

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 184 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 234



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 184 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 233


>gi|303318929|ref|XP_003069464.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240109150|gb|EER27319.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 565

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           + E +  VL+ W   +   PYP+ +EK ELAE T LT TQVS WF N R+R R A
Sbjct: 76  WSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRRGRHA 130



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           + E +  VL+ W   +   PYP+ +EK ELAE T LT TQVS WF++A
Sbjct: 76  WSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANA 123


>gi|13752409|gb|AAK38646.1|AF334759_1 homeodomain protein JUBEL2 [Hordeum vulgare subsp. vulgare]
 gi|260183696|gb|ACX35970.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
 gi|291464055|gb|ADE05565.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|291464057|gb|ADE05566.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|326499894|dbj|BAJ90782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 26/132 (19%)

Query: 86  VLSYQALASH-KSIFDKVVTSYKEVWKSPVKTYQSSSIIINIIKYRVR------------ 132
            L+ + +A H K+I + +++  +   K PVK    SS+  +I  + +             
Sbjct: 275 ALALRVMAKHFKTIKEMILSQLRNTSKMPVK---GSSMSKDITIFGLGGGGGAPVGGFQR 331

Query: 133 ----RKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTT 185
                 F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT 
Sbjct: 332 GSSVNGFGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTR 388

Query: 186 TQVSNWFSSANI 197
            QVSNWF +A +
Sbjct: 389 NQVSNWFINARV 400



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 338 FGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 394

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 395 FINARVR 401


>gi|149027939|gb|EDL83390.1| pre-B-cell leukemia transcription factor 2, isoform CRA_e [Rattus
           norvegicus]
          Length = 192

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 13  FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 72

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 73  EEANIYAVKTAVSVAQGGHSRT 94



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 13  FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 62


>gi|358366569|dbj|GAA83189.1| homeobox protein meis [Aspergillus kawachii IFO 4308]
          Length = 532

 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 3/47 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 391
            LR W   +  NPYP+ +EK ELA+ TGLT  QVSNWF N R+R R+
Sbjct: 82  ALRSWLNNHPENPYPTTQEKDELAQRTGLTRAQVSNWFINARRRKRS 128



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
            LR W   +  NPYP+ +EK ELA+ TGLT  QVSNWF +A
Sbjct: 82  ALRSWLNNHPENPYPTTQEKDELAQRTGLTRAQVSNWFINA 122


>gi|357133433|ref|XP_003568329.1| PREDICTED: LOW QUALITY PROTEIN: BEL1-like homeodomain protein
           9-like [Brachypodium distachyon]
          Length = 585

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 14/84 (16%)

Query: 308 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREK 364
           +RG  + A G+         P  IW  +       E++ SVLR W + H  +PYP+  +K
Sbjct: 329 MRGSNVNAFGQQ--------PHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDK 377

Query: 365 RELAEATGLTTTQVSNWFKNRRQR 388
           + LA+ TGLT  QVSNWF N R R
Sbjct: 378 QMLAKQTGLTRNQVSNWFINARVR 401



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 6/63 (9%)

Query: 138 PRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSS 194
           P  IW  +       E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +
Sbjct: 341 PHNIWRPQR---GLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFIN 397

Query: 195 ANI 197
           A +
Sbjct: 398 ARV 400


>gi|15149472|ref|NP_079521.1| pre-B-cell leukemia transcription factor 4 [Homo sapiens]
 gi|122065777|sp|Q9BYU1.2|PBX4_HUMAN RecName: Full=Pre-B-cell leukemia transcription factor 4; AltName:
           Full=Homeobox protein PBX4
 gi|119605241|gb|EAW84835.1| pre-B-cell leukemia transcription factor 4, isoform CRA_b [Homo
           sapiens]
 gi|146327526|gb|AAI41860.1| Pre-B-cell leukemia homeobox 4 [Homo sapiens]
 gi|148745216|gb|AAI43093.1| Pre-B-cell leukemia homeobox 4 [synthetic construct]
          Length = 374

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266

Query: 388 R 388
           R
Sbjct: 267 R 267



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266


>gi|193783560|dbj|BAG53471.1| unnamed protein product [Homo sapiens]
          Length = 374

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266

Query: 388 R 388
           R
Sbjct: 267 R 267



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266


>gi|55669505|gb|AAV54620.1| homeobox transcription factor KN3 [Pinus taeda]
          Length = 470

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF N+R+R
Sbjct: 383 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKR 430



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF
Sbjct: 383 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWF 424


>gi|46127073|ref|XP_388090.1| hypothetical protein FG07914.1 [Gibberella zeae PH-1]
          Length = 605

 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           VLR+WY  N   PYPS  EK  LA+ +GL+ +QV NWF N R+R R A
Sbjct: 244 VLRNWYLSNLDHPYPSEEEKVGLAQQSGLSRSQVVNWFANSRRRHRLA 291



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           VLR+WY  N   PYPS  EK  LA+ +GL+ +QV NWF+++
Sbjct: 244 VLRNWYLSNLDHPYPSEEEKVGLAQQSGLSRSQVVNWFANS 284


>gi|339895|gb|AAA36764.1| E2A/PRL fusion protein, partial [Homo sapiens]
          Length = 550

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 360 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 410



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 360 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 409


>gi|26023937|gb|AAN77690.1|AF483277_1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
          Length = 383

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF N+R+R
Sbjct: 296 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKR 343



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF
Sbjct: 296 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWF 337


>gi|449268916|gb|EMC79745.1| Pre-B-cell leukemia transcription factor 4, partial [Columba livia]
          Length = 332

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 176 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIR 226



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 176 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRI 225


>gi|392865087|gb|EAS30838.2| hypothetical protein CIMG_06089 [Coccidioides immitis RS]
          Length = 646

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           VL+ W   N   PYP+ +EK ELAE T LT TQVS WF N R+R R A
Sbjct: 103 VLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRRGRHA 150



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           VL+ W   N   PYP+ +EK ELAE T LT TQVS WF++A
Sbjct: 103 VLKKWLKQNCRHPYPTKQEKAELAEQTELTVTQVSTWFANA 143


>gi|425765481|gb|EKV04160.1| Homeobox and C2H2 transcription factor, putative [Penicillium
           digitatum Pd1]
 gi|425778339|gb|EKV16470.1| Homeobox and C2H2 transcription factor, putative [Penicillium
           digitatum PHI26]
          Length = 733

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 341 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  K+ S+L+ W   +  NPYP+ +E+ +L + +GLT TQ++NW  N R+R +      G
Sbjct: 152 FSRKATSILKGWPRDHNENPYPTEQEREKLKQHSGLTRTQIANWLANARRRGKVRSSPGG 211

Query: 398 S 398
           S
Sbjct: 212 S 212



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 7/62 (11%)

Query: 151 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA----NITSSPNT 203
           F  K+ S+L+ W   +  NPYP+ +E+ +L + +GLT TQ++NW ++A     + SSP  
Sbjct: 152 FSRKATSILKGWPRDHNENPYPTEQEREKLKQHSGLTRTQIANWLANARRRGKVRSSPGG 211

Query: 204 ST 205
           S+
Sbjct: 212 SS 213


>gi|397493973|ref|XP_003817870.1| PREDICTED: pre-B-cell leukemia transcription factor 4 [Pan
           paniscus]
          Length = 386

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 219 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTVSQVSNWFGNKRI 278

Query: 388 R 388
           R
Sbjct: 279 R 279



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 219 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTVSQVSNWFGNKRI 278


>gi|444721143|gb|ELW61896.1| Neurogenic locus notch like protein 4 [Tupaia chinensis]
          Length = 1766

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341  FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 1634 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 1684



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151  FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
            F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 1634 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 1683


>gi|242019283|ref|XP_002430091.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212515172|gb|EEB17353.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 283

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 300 AHYVEAEKLRGRPLGAVGKY--RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT--- 354
           AH +E++K     L  + K+  R+ R     R + D   T   F  + +  L+ W     
Sbjct: 2   AHNIESDK---GDLNKINKFNGRILRNRQYKRPLLDPRPTKRLFTPEIKRHLKSWLVRRR 58

Query: 355 HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            NPYP+  EK ELA  TGLT  Q+ NWF N R++
Sbjct: 59  ENPYPNREEKIELAAQTGLTYIQICNWFANWRRK 92



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 124 INIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEA 180
           IN    R+ R     R + D   T   F  + +  L+ W      NPYP+  EK ELA  
Sbjct: 15  INKFNGRILRNRQYKRPLLDPRPTKRLFTPEIKRHLKSWLVRRRENPYPNREEKIELAAQ 74

Query: 181 TGLTTTQVSNWFSS 194
           TGLT  Q+ NWF++
Sbjct: 75  TGLTYIQICNWFAN 88


>gi|195386410|ref|XP_002051897.1| GJ17252 [Drosophila virilis]
 gi|194148354|gb|EDW64052.1| GJ17252 [Drosophila virilis]
          Length = 318

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQV 378
           RR +P    +     T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+
Sbjct: 15  RRAWPPEDDLHLTRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAGETGLTYTQI 74

Query: 379 SNWFKNRRQRDRAAEQK 395
            NWF N R++ + +E++
Sbjct: 75  CNWFANWRRKLKNSERE 91



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 132 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQV 188
           RR +P    +     T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+
Sbjct: 15  RRAWPPEDDLHLTRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAGETGLTYTQI 74

Query: 189 SNWFSS 194
            NWF++
Sbjct: 75  CNWFAN 80


>gi|21915536|ref|NP_571522.1| pre-B-cell leukemia homeobox 4 [Danio rerio]
 gi|5679283|gb|AAD46908.1|AF162696_1 Pbx4 homeodomain protein [Danio rerio]
 gi|7160800|emb|CAB76458.1| Pbx4/Lazarus homeodomain protein [Danio rerio]
 gi|190336613|gb|AAI62094.1| Pre-B-cell leukemia transcription factor 4 [Danio rerio]
 gi|190337824|gb|AAI62106.1| Pre-B-cell leukemia transcription factor 4 [Danio rerio]
          Length = 343

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 287


>gi|56694848|gb|AAW23086.1| Meis-b [Oikopleura dioica]
          Length = 378

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF N R+R
Sbjct: 230 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINARRR 281



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF +A
Sbjct: 230 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINA 278


>gi|402858031|ref|XP_003893534.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Papio
           anubis]
          Length = 430

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|340519217|gb|EGR49456.1| predicted protein [Trichoderma reesei QM6a]
          Length = 535

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 344 KSRSVLRDWY-TH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           K   VLR+W+ TH  +PYPS  EK  L+E +GLT TQV NWF N R+R R   Q
Sbjct: 176 KKTRVLRNWFATHQEHPYPSEDEKCMLSEQSGLTKTQVINWFANARRRHRLTAQ 229



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 154 KSRSVLRDWY-TH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           K   VLR+W+ TH  +PYPS  EK  L+E +GLT TQV NWF++A
Sbjct: 176 KKTRVLRNWFATHQEHPYPSEDEKCMLSEQSGLTKTQVINWFANA 220


>gi|293330419|dbj|BAJ04690.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 623

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 19/128 (14%)

Query: 86  VLSYQALASH-KSIFDKVVTSYKEVWKSPVKTYQSSSIII------------NIIKYRVR 132
            L+ + +A H + I   +++  +   K PVK   S  I I               +    
Sbjct: 291 ALALRVMARHFRCIKGMILSQLRNTSKMPVKEGMSKDITIFGLGGGGGAPVGGFQRGGSV 350

Query: 133 RKFPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVS 189
             F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  QVS
Sbjct: 351 NGFGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVS 407

Query: 190 NWFSSANI 197
           NWF +A +
Sbjct: 408 NWFINARV 415



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 325 FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNW 381
           F  P  IW          E+S +VLR W + H  +PYP+  +K+ LA+ TGLT  QVSNW
Sbjct: 353 FGQPHNIW---RPQRGLPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNW 409

Query: 382 FKNRRQR 388
           F N R R
Sbjct: 410 FINARVR 416


>gi|313246127|emb|CBY35079.1| unnamed protein product [Oikopleura dioica]
          Length = 409

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF N R+R
Sbjct: 230 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINARRR 281



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 15/85 (17%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF------------SS 194
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF             S
Sbjct: 230 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINARRRIVQPMIDS 289

Query: 195 ANITSSPNTSTSTASISPILPSFGF 219
           +N   +P TS S  S  P  P  G 
Sbjct: 290 SNRAMAPYTSGSYPSPDPYGPGMGV 314


>gi|221043696|dbj|BAH13525.1| unnamed protein product [Homo sapiens]
          Length = 145

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 42  LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 101

Query: 388 R 388
           R
Sbjct: 102 R 102



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 42  LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 101


>gi|327284083|ref|XP_003226768.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like [Anolis
           carolinensis]
          Length = 433

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 243 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 293



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 243 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 292


>gi|432910572|ref|XP_004078420.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like [Oryzias
           latipes]
          Length = 396

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 6/73 (8%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 254 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKQCGITVSQVSNWFGNKRIRYKKNIGKFQ 313

Query: 395 KDGSVHSFRVNIG 407
           ++ ++++ +  +G
Sbjct: 314 EEANLYAMKTALG 326



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 254 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKQCGITVSQVSNWFGNKRI 303


>gi|410902635|ref|XP_003964799.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like
           [Takifugu rubripes]
          Length = 422

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 287


>gi|355746153|gb|EHH50778.1| hypothetical protein EGM_01655, partial [Macaca fascicularis]
          Length = 419

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 229 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 279



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 229 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 278


>gi|149755772|ref|XP_001493290.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Equus caballus]
          Length = 430

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|119624021|gb|EAX03616.1| hCG2001537, isoform CRA_e [Homo sapiens]
          Length = 344

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTS--T 205
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I    N     
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 206 STASISPILPSFGFTQ 221
             A+I  +  +   TQ
Sbjct: 311 EEANIYAVKTAVSVTQ 326


>gi|4505623|ref|NP_002576.1| pre-B-cell leukemia transcription factor 1 isoform 1 [Homo sapiens]
 gi|34365779|ref|NP_899198.1| pre-B-cell leukemia transcription factor 1 isoform a [Mus musculus]
 gi|198442893|ref|NP_001128334.1| pre-B-cell leukemia transcription factor 1 isoform a [Rattus
           norvegicus]
 gi|300795559|ref|NP_001179697.1| pre-B-cell leukemia transcription factor 1 [Bos taurus]
 gi|114561077|ref|XP_001174529.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Pan troglodytes]
 gi|291397516|ref|XP_002715935.1| PREDICTED: pre-B-cell leukemia homeobox 1-like [Oryctolagus
           cuniculus]
 gi|296229942|ref|XP_002760490.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Callithrix
           jacchus]
 gi|297662854|ref|XP_002809903.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Pongo abelii]
 gi|335286581|ref|XP_003355126.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Sus scrofa]
 gi|344287029|ref|XP_003415258.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Loxodonta africana]
 gi|348565789|ref|XP_003468685.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Cavia porcellus]
 gi|395825139|ref|XP_003785799.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Otolemur
           garnettii]
 gi|397508362|ref|XP_003824627.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Pan
           paniscus]
 gi|403305809|ref|XP_003943445.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like [Saimiri
           boliviensis boliviensis]
 gi|426332547|ref|XP_004027865.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Gorilla gorilla gorilla]
 gi|730279|sp|P40424.1|PBX1_HUMAN RecName: Full=Pre-B-cell leukemia transcription factor 1; AltName:
           Full=Homeobox protein PBX1; AltName: Full=Homeobox
           protein PRL
 gi|20141754|sp|P41778.2|PBX1_MOUSE RecName: Full=Pre-B-cell leukemia transcription factor 1; AltName:
           Full=Homeobox protein PBX1
 gi|189648|gb|AAA60031.1| PBX1a [Homo sapiens]
 gi|2432009|gb|AAB71191.1| PBX1a [Mus musculus]
 gi|11120612|gb|AAG30941.1| PBX1 [Homo sapiens]
 gi|34849830|gb|AAH58390.1| Pre B-cell leukemia transcription factor 1 [Mus musculus]
 gi|75516599|gb|AAI01579.1| Pre-B-cell leukemia homeobox 1 [Homo sapiens]
 gi|119611145|gb|EAW90739.1| pre-B-cell leukemia transcription factor 1, isoform CRA_b [Homo
           sapiens]
 gi|119611146|gb|EAW90740.1| pre-B-cell leukemia transcription factor 1, isoform CRA_b [Homo
           sapiens]
 gi|168277526|dbj|BAG10741.1| pre-B-cell leukemia transcription factor 1 [synthetic construct]
 gi|296489925|tpg|DAA32038.1| TPA: pre-B-cell leukemia homeobox 1 [Bos taurus]
 gi|380813258|gb|AFE78503.1| pre-B-cell leukemia transcription factor 1 isoform 1 [Macaca
           mulatta]
 gi|410226274|gb|JAA10356.1| pre-B-cell leukemia homeobox 1 [Pan troglodytes]
 gi|410255186|gb|JAA15560.1| pre-B-cell leukemia homeobox 1 [Pan troglodytes]
 gi|410299148|gb|JAA28174.1| pre-B-cell leukemia homeobox 1 [Pan troglodytes]
 gi|410338451|gb|JAA38172.1| pre-B-cell leukemia homeobox 1 [Pan troglodytes]
          Length = 430

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|334321871|ref|XP_001370326.2| PREDICTED: pre-B-cell leukemia transcription factor 1 [Monodelphis
           domestica]
 gi|395530694|ref|XP_003767423.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Sarcophilus harrisii]
          Length = 430

 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|74006104|ref|XP_545786.2| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Canis lupus familiaris]
 gi|301756733|ref|XP_002914215.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           1 [Ailuropoda melanoleuca]
 gi|410986577|ref|XP_003999586.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Felis catus]
          Length = 430

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|221043666|dbj|BAH13510.1| unnamed protein product [Homo sapiens]
          Length = 301

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 185



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 184


>gi|417410615|gb|JAA51777.1| Putative transcription factor pbx, partial [Desmodus rotundus]
          Length = 427

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 237 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 287



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 237 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 286


>gi|158256266|dbj|BAF84104.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|358382482|gb|EHK20154.1| hypothetical protein TRIVIDRAFT_48126 [Trichoderma virens Gv29-8]
          Length = 612

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 344 KSRSVLRDWY-TH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
           K   VLR+W+ TH  +PYPS  EK  L+E +GL+ TQV NWF N R+R R   Q
Sbjct: 215 KKTRVLRNWFATHQEHPYPSEDEKSMLSEQSGLSKTQVINWFANARRRHRLTAQ 268



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 3/45 (6%)

Query: 154 KSRSVLRDWY-TH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           K   VLR+W+ TH  +PYPS  EK  L+E +GL+ TQV NWF++A
Sbjct: 215 KKTRVLRNWFATHQEHPYPSEDEKSMLSEQSGLSKTQVINWFANA 259


>gi|348501242|ref|XP_003438179.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           1 [Oreochromis niloticus]
          Length = 428

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTS 204
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I    N S
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIS 294


>gi|334323580|ref|XP_003340411.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Monodelphis
           domestica]
          Length = 430

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|46048897|ref|NP_990077.1| pre-B-cell leukemia transcription factor 1 [Gallus gallus]
 gi|8096555|dbj|BAA96135.1| PBX1A [Gallus gallus]
          Length = 430

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|320041173|gb|EFW23106.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 599

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAA 392
           + E +  VL+ W   +   PYP+ +EK ELAE T LT TQVS WF N R+R R A
Sbjct: 76  WSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANARRRGRHA 130



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           + E +  VL+ W   +   PYP+ +EK ELAE T LT TQVS WF++A
Sbjct: 76  WSEDAVEVLKKWLKQDCRHPYPTKQEKAELAEQTELTVTQVSTWFANA 123


>gi|72000788|ref|NP_001024175.1| Protein UNC-62, isoform g [Caenorhabditis elegans]
 gi|351063978|emb|CCD72267.1| Protein UNC-62, isoform g [Caenorhabditis elegans]
          Length = 490

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 325 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 375



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 325 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 372


>gi|395530696|ref|XP_003767424.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Sarcophilus harrisii]
          Length = 422

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|355558989|gb|EHH15769.1| hypothetical protein EGK_01905, partial [Macaca mulatta]
          Length = 399

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 209 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 259



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 209 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 258


>gi|348508938|ref|XP_003442009.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like
           [Oreochromis niloticus]
          Length = 422

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 287


>gi|410986583|ref|XP_003999589.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 4
           [Felis catus]
          Length = 422

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|302842987|ref|XP_002953036.1| hypothetical protein VOLCADRAFT_93696 [Volvox carteri f.
           nagariensis]
 gi|300261747|gb|EFJ45958.1| hypothetical protein VOLCADRAFT_93696 [Volvox carteri f.
           nagariensis]
          Length = 113

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)

Query: 348 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L +WYT N   P+PS +E  EL + TGLT +QV++WF N+RQR
Sbjct: 1   MLMNWYTANLVWPFPSDKEIEELRDKTGLTLSQVADWFSNKRQR 44



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 3/40 (7%)

Query: 158 VLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSS 194
           +L +WYT N   P+PS +E  EL + TGLT +QV++WFS+
Sbjct: 1   MLMNWYTANLVWPFPSDKEIEELRDKTGLTLSQVADWFSN 40


>gi|114561079|ref|XP_001174513.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Pan troglodytes]
          Length = 422

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|12697318|emb|CAC28212.1| PBX4 protein [Homo sapiens]
          Length = 330

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF N+R 
Sbjct: 163 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 222

Query: 388 R 388
           R
Sbjct: 223 R 223



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 163 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 222


>gi|168051647|ref|XP_001778265.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
 gi|162670362|gb|EDQ56932.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
          Length = 428

 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)

Query: 310 GRPLGAVGK--YRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREK 364
           GR +G +     RVR+K  LP +              +RS+L+DW+  +   PYPS  EK
Sbjct: 331 GRHIGELKAEFNRVRKKGKLPSS--------------ARSILKDWFNRHSYWPYPSEMEK 376

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           + L +  GL   Q++NWF N R+R  + E K
Sbjct: 377 QYLQKLCGLNLKQINNWFINERKRHWSCEGK 407



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 17/66 (25%)

Query: 130 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTT 186
           RVR+K  LP +              +RS+L+DW+  +   PYPS  EK+ L +  GL   
Sbjct: 343 RVRKKGKLPSS--------------ARSILKDWFNRHSYWPYPSEMEKQYLQKLCGLNLK 388

Query: 187 QVSNWF 192
           Q++NWF
Sbjct: 389 QINNWF 394


>gi|47220028|emb|CAG12176.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 509

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 287


>gi|18149007|dbj|BAB83538.1| pre-B-cell leukemia transcription factor 1 [Macaca fascicularis]
          Length = 325

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 185



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 184


>gi|72000776|ref|NP_001024169.1| Protein UNC-62, isoform a [Caenorhabditis elegans]
 gi|75023440|sp|Q9N5D6.1|UNC62_CAEEL RecName: Full=Homeobox protein unc-62; AltName: Full=Uncoordinated
           protein 62
 gi|18182383|gb|AAL65143.1|AF427475_1 UNC-62 splice variant 1a-7b [Caenorhabditis elegans]
 gi|351063972|emb|CCD72261.1| Protein UNC-62, isoform a [Caenorhabditis elegans]
          Length = 564

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 398 VFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
            F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 398 VFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 446


>gi|348511324|ref|XP_003443194.1| PREDICTED: pre-B-cell leukemia transcription factor 2-like
           [Oreochromis niloticus]
          Length = 402

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 6/73 (8%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 258 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKQCGITVSQVSNWFGNKRIRYKKNIGKFQ 317

Query: 395 KDGSVHSFRVNIG 407
           ++ ++++ +  +G
Sbjct: 318 EEANLYAMKTALG 330



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 258 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKQCGITVSQVSNWFGNKRI 307


>gi|72000778|ref|NP_001024170.1| Protein UNC-62, isoform b [Caenorhabditis elegans]
 gi|18182387|gb|AAL65145.1|AF427477_1 UNC-62 splice variant 1b-7b [Caenorhabditis elegans]
 gi|351063973|emb|CCD72262.1| Protein UNC-62, isoform b [Caenorhabditis elegans]
          Length = 527

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 362 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 412



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 362 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 409


>gi|348501246|ref|XP_003438181.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           3 [Oreochromis niloticus]
          Length = 420

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTS 204
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I    N S
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIS 294


>gi|313230972|emb|CBY18970.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF N R+R
Sbjct: 192 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINARRR 243



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 15/85 (17%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF------------SS 194
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF             S
Sbjct: 192 IFPKQATNILRAWLFQNLTHPYPSEEQKKNLSQQTGLTILQVNNWFINARRRIVQPMIDS 251

Query: 195 ANITSSPNTSTSTASISPILPSFGF 219
           +N   +P TS S  S  P  P  G 
Sbjct: 252 SNRAMAPYTSGSYPSPDPYGPGMGV 276


>gi|383418765|gb|AFH32596.1| pre-B-cell leukemia transcription factor 2 [Macaca mulatta]
          Length = 315

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPN 202
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I    N
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKN 305


>gi|328870603|gb|EGG18976.1| homeobox transcription factor [Dictyostelium fasciculatum]
          Length = 360

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)

Query: 349 LRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSV 399
           L+DWY  +   PYP   EK  LA  T ++ +Q+ NWF NRR RD+A  +KD +V
Sbjct: 226 LKDWYLCHQMVPYPDEEEKSVLASQTNISRSQLDNWFGNRRMRDKA--KKDSTV 277


>gi|297281399|ref|XP_002802090.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like [Macaca
           mulatta]
 gi|119611144|gb|EAW90738.1| pre-B-cell leukemia transcription factor 1, isoform CRA_a [Homo
           sapiens]
 gi|344235790|gb|EGV91893.1| Pre-B-cell leukemia transcription factor 1 [Cricetulus griseus]
          Length = 325

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 185



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 135 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 184


>gi|441634917|ref|XP_004089876.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Nomascus leucogenys]
          Length = 358

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 168 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 218



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 168 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 217


>gi|403303610|ref|XP_003942419.1| PREDICTED: pre-B-cell leukemia transcription factor 4 [Saimiri
           boliviensis boliviensis]
          Length = 285

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)

Query: 304 EAEKLRGRPLGAVGKYRVRRK-------FPLPRTIWDGEETSYCFKEKSRSVLRDW-YTH 355
           E E++ G   G  G  +++ K         L   + D       F +++  VL ++ Y+H
Sbjct: 152 EIERMVGAIHGKFGAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSH 211

Query: 356 --NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 212 LSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 246



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 186 LLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 245

Query: 198 TSSPN 202
               N
Sbjct: 246 RYKKN 250


>gi|28373541|pdb|1LFU|P Chain P, Nmr Solution Stucture Of The Extended Pbx Homeodomain
           Bound To Dna
          Length = 82

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+ +G+T +QVSNWF N+R R
Sbjct: 9   FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKSGITVSQVSNWFGNKRIR 59



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPN 202
           F +++  +L ++ Y+H  NPYPS   K ELA+ +G+T +QVSNWF +  I    N
Sbjct: 9   FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKSGITVSQVSNWFGNKRIRYKKN 63


>gi|395533855|ref|XP_003768968.1| PREDICTED: pre-B-cell leukemia transcription factor 2 [Sarcophilus
           harrisii]
          Length = 430

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 301



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|323305013|gb|EGA58767.1| Tos8p [Saccharomyces cerevisiae FostersB]
          Length = 174

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 3/45 (6%)

Query: 347 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF N R+R
Sbjct: 123 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRR 167



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 157 SVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           S+L  W   + +NPYP+ +EKREL   TGLT  Q+SNWF +A
Sbjct: 123 SILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINA 164


>gi|449268314|gb|EMC79184.1| Pre-B-cell leukemia transcription factor 1, partial [Columba livia]
          Length = 343

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 153 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 203



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 153 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 202


>gi|107390|pir||B33061 homeotic protein prl - human
 gi|190358|gb|AAA36484.1| homeobox-containing protein, partial [Homo sapiens]
          Length = 342

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 152 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 202



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 152 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 201


>gi|417400123|gb|JAA47027.1| Putative transcription factor pbx [Desmodus rotundus]
          Length = 392

 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|313235216|emb|CBY10781.1| unnamed protein product [Oikopleura dioica]
          Length = 388

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF N R+R
Sbjct: 244 LFPKQATNILRAWLFQNLTHPYPSEEQKKHLSQQTGLTILQVNNWFINARRR 295



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 11/83 (13%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSAN-------ITS 199
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF +A        I  
Sbjct: 244 LFPKQATNILRAWLFQNLTHPYPSEEQKKHLSQQTGLTILQVNNWFINARRRIVQPMIDQ 303

Query: 200 SPNTSTSTASISP-ILPSFGFTQ 221
           S    ++T    P ++ SF  +Q
Sbjct: 304 SNRAVSATMPYDPRVMGSFAVSQ 326


>gi|281348857|gb|EFB24441.1| hypothetical protein PANDA_002083 [Ailuropoda melanoleuca]
          Length = 342

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 152 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 202



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 152 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 201


>gi|255719654|ref|XP_002556107.1| KLTH0H05236p [Lachancea thermotolerans]
 gi|238942073|emb|CAR30245.1| KLTH0H05236p [Lachancea thermotolerans CBS 6340]
          Length = 234

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L  W   + +NPYPSP+EKREL   TGL+  Q+SNWF N R+R
Sbjct: 116 ILNAWLASHLNNPYPSPQEKRELLVQTGLSKVQLSNWFINVRRR 159



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L  W   + +NPYPSP+EKREL   TGL+  Q+SNWF
Sbjct: 116 ILNAWLASHLNNPYPSPQEKRELLVQTGLSKVQLSNWF 153


>gi|452825196|gb|EME32194.1| homeobox protein [Galdieria sulphuraria]
          Length = 247

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 345 SRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR 390
           +R VL DW+    H+PYPS + KRELA   G+T  QV+ +F N+R R +
Sbjct: 152 ARKVLNDWFHANMHHPYPSEKVKRELAHEAGITVEQVNTFFGNKRMRTK 200



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)

Query: 155 SRSVLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           +R VL DW+    H+PYPS + KRELA   G+T  QV+ +F +  +
Sbjct: 152 ARKVLNDWFHANMHHPYPSEKVKRELAHEAGITVEQVNTFFGNKRM 197


>gi|308474218|ref|XP_003099331.1| CRE-IRX-1 protein [Caenorhabditis remanei]
 gi|308267470|gb|EFP11423.1| CRE-IRX-1 protein [Caenorhabditis remanei]
          Length = 368

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 313 LGAVGKYRVRRKFPLPRTIW-----DGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREK 364
           +GA G   +   F  P  ++     DG +     +E + + L+DW +TH  NPYPS  +K
Sbjct: 75  MGAGGPGPIPFMFGDPHRLYHPYAMDGMKKRNATREAT-APLKDWLHTHRKNPYPSKNDK 133

Query: 365 RELAEATGLTTTQVSNWFKNRRQR 388
             LA  TG+T TQVS WF N R+R
Sbjct: 134 LMLAVTTGMTLTQVSTWFANARRR 157



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 4/56 (7%)

Query: 143 DGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           DG +     +E + + L+DW +TH  NPYPS  +K  LA  TG+T TQVS WF++A
Sbjct: 100 DGMKKRNATREAT-APLKDWLHTHRKNPYPSKNDKLMLAVTTGMTLTQVSTWFANA 154


>gi|224058884|ref|XP_002190535.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Taeniopygia
           guttata]
          Length = 374

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 184 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 234



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 184 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 233


>gi|191961792|ref|NP_001122133.1| pre-B-cell leukemia transcription factor 2 [Xenopus (Silurana)
           tropicalis]
 gi|224493164|sp|B3DM47.1|PBX2_XENTR RecName: Full=Pre-B-cell leukemia transcription factor 2; AltName:
           Full=Homeobox protein pbx2
 gi|189441850|gb|AAI67699.1| pbx2 protein [Xenopus (Silurana) tropicalis]
          Length = 422

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 244 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 294



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 244 FSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 293


>gi|432868102|ref|XP_004071412.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like [Oryzias
           latipes]
          Length = 422

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 238 FNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 287


>gi|326924814|ref|XP_003208620.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like
           [Meleagris gallopavo]
          Length = 415

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 225 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 275



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 225 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 274


>gi|366993068|ref|XP_003676299.1| hypothetical protein NCAS_0D03570 [Naumovozyma castellii CBS 4309]
 gi|342302165|emb|CCC69938.1| hypothetical protein NCAS_0D03570 [Naumovozyma castellii CBS 4309]
          Length = 257

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVHSFRV 404
           VL  W   + +NPYP+ +EK+ L E TGLT  Q+SNWF N R+R    E  D  ++  + 
Sbjct: 194 VLNGWLLEHLNNPYPNVQEKKLLLELTGLTKVQLSNWFINVRRRKVFNENYDSYLNQKKP 253

Query: 405 NIG 407
           N G
Sbjct: 254 NAG 256



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           VL  W   + +NPYP+ +EK+ L E TGLT  Q+SNWF
Sbjct: 194 VLNGWLLEHLNNPYPNVQEKKLLLELTGLTKVQLSNWF 231


>gi|164454389|dbj|BAF96741.1| knotted-like homeobox transcription factor MKN5 [Physcomitrella
           patens]
          Length = 404

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)

Query: 310 GRPLGAVGKY--RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREK 364
           GR +G +     RVR+K  LP +              +RS+L+DW+  +   PYPS  EK
Sbjct: 307 GRHIGELKAEFNRVRKKGKLPSS--------------ARSILKDWFNRHSYWPYPSEMEK 352

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           + L +  GL   Q++NWF N R+R  + E K
Sbjct: 353 QYLQKLCGLNLKQINNWFINERKRHWSCEGK 383



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 17/66 (25%)

Query: 130 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTT 186
           RVR+K  LP +              +RS+L+DW+  +   PYPS  EK+ L +  GL   
Sbjct: 319 RVRKKGKLPSS--------------ARSILKDWFNRHSYWPYPSEMEKQYLQKLCGLNLK 364

Query: 187 QVSNWF 192
           Q++NWF
Sbjct: 365 QINNWF 370


>gi|426387968|ref|XP_004060434.1| PREDICTED: pre-B-cell leukemia transcription factor 4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 373

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 216 FSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 266



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 216 FSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 265


>gi|426219117|ref|XP_004003776.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Ovis aries]
          Length = 488

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 298 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 348



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 298 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 347


>gi|403216391|emb|CCK70888.1| hypothetical protein KNAG_0F02210 [Kazachstania naganishii CBS
           8797]
          Length = 324

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L +W   + H+PYP+P EK EL   TGLT  Q+SNWF N R+R
Sbjct: 253 MLNNWLLNHLHDPYPTPHEKLELLRQTGLTKIQLSNWFINVRRR 296



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L +W   + H+PYP+P EK EL   TGLT  Q+SNWF
Sbjct: 253 MLNNWLLNHLHDPYPTPHEKLELLRQTGLTKIQLSNWF 290


>gi|395848124|ref|XP_003796710.1| PREDICTED: LOW QUALITY PROTEIN: pre-B-cell leukemia transcription
           factor 4 [Otolemur garnettii]
          Length = 377

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 219 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 269



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 219 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 268


>gi|332811117|ref|XP_003308631.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Pan
           troglodytes]
 gi|426332553|ref|XP_004027868.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 4
           [Gorilla gorilla gorilla]
          Length = 420

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|326320052|ref|NP_001191892.1| pre-B-cell leukemia transcription factor 1 isoform 3 [Homo sapiens]
          Length = 420

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|431916084|gb|ELK16338.1| Pre-B-cell leukemia transcription factor 1 [Pteropus alecto]
          Length = 356

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 159 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 209



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 159 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 208


>gi|194389132|dbj|BAG61583.1| unnamed protein product [Homo sapiens]
          Length = 420

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|60100884|gb|AAK61308.2|AF285147_1 class 1 KNOTTED1-like protein MKN2 [Physcomitrella patens]
          Length = 384

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)

Query: 310 GRPLGAVGKY--RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREK 364
           GR +G +     RVR+K  LP +              +R++L+DW+   +H PYPS  EK
Sbjct: 257 GRHIGELKAEFNRVRKKGKLPTS--------------ARTILKDWFNRHSHWPYPSEMEK 302

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           + L    GL   Q++NWF N R+R  + E K
Sbjct: 303 QYLQRICGLNLKQINNWFINERKRHWSCEGK 333



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 17/66 (25%)

Query: 130 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTT 186
           RVR+K  LP +              +R++L+DW+   +H PYPS  EK+ L    GL   
Sbjct: 269 RVRKKGKLPTS--------------ARTILKDWFNRHSHWPYPSEMEKQYLQRICGLNLK 314

Query: 187 QVSNWF 192
           Q++NWF
Sbjct: 315 QINNWF 320


>gi|38490438|emb|CAD57737.1| extradenticle 1 [Cupiennius salei]
          Length = 453

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 253 FSKQATEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 303



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 253 FSKQATEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 302


>gi|72000784|ref|NP_001024173.1| Protein UNC-62, isoform e [Caenorhabditis elegans]
 gi|18182385|gb|AAL65144.1|AF427476_1 UNC-62 splice variant 1b-7a [Caenorhabditis elegans]
 gi|351063976|emb|CCD72265.1| Protein UNC-62, isoform e [Caenorhabditis elegans]
          Length = 523

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 19/78 (24%)

Query: 314 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEA 370
           G +GK R R  FP                +++ + LR W   N   PYPS  +K++LA+ 
Sbjct: 347 GRIGKSRGRGIFP----------------KQATNRLRQWLFQNLTHPYPSEEQKKQLAKE 390

Query: 371 TGLTTTQVSNWFKNRRQR 388
           TGLT  QV+NWF N R+R
Sbjct: 391 TGLTILQVNNWFINARRR 408



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ + LR W   N   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 358 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 405


>gi|410928516|ref|XP_003977646.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           1 [Takifugu rubripes]
          Length = 428

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRIR 288



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF +  I
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRI 287


>gi|351696219|gb|EHA99137.1| Pre-B-cell leukemia transcription factor 1 [Heterocephalus glaber]
          Length = 417

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 258 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 308



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 258 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 307


>gi|345787004|ref|XP_852080.2| PREDICTED: pre-B-cell leukemia transcription factor 4 [Canis lupus
           familiaris]
          Length = 385

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 228 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 278



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 228 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 277


>gi|301123853|ref|XP_002909653.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100415|gb|EEY58467.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 243

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           KS   L  W+     NPYPSP E+ E+AE TGL   QV NWF N R+R
Sbjct: 171 KSNEFLIAWFLAHKDNPYPSPDERVEIAEKTGLAEQQVRNWFANMRKR 218



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 154 KSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           KS   L  W+     NPYPSP E+ E+AE TGL   QV NWF++
Sbjct: 171 KSNEFLIAWFLAHKDNPYPSPDERVEIAEKTGLAEQQVRNWFAN 214


>gi|56752547|gb|AAW24487.1| SJCHGC06100 protein [Schistosoma japonicum]
          Length = 414

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 266 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 316



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 266 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 315


>gi|2577977|emb|CAA04166.1| CEH-25 homeobox protein [Caenorhabditis elegans]
          Length = 265

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 99  VFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 150



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
            F +++ +  R W  HN   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 99  VFSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 147


>gi|402904903|ref|XP_003915278.1| PREDICTED: pre-B-cell leukemia transcription factor 4 [Papio
           anubis]
          Length = 377

 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R 
Sbjct: 210 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 269

Query: 388 R 388
           R
Sbjct: 270 R 270



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 210 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 269


>gi|355709425|gb|AES03587.1| pre-B-cell leukemia homeobox 4 [Mustela putorius furo]
          Length = 227

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 71  FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 121



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 71  FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 120


>gi|294460537|gb|ADE75844.1| unknown [Picea sitchensis]
          Length = 169

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF N+R+R
Sbjct: 82  EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKR 129



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF
Sbjct: 82  EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWF 123


>gi|224123968|ref|XP_002330254.1| predicted protein [Populus trichocarpa]
 gi|222871710|gb|EEF08841.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 3/47 (6%)

Query: 345 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +R+ L DW+ H+   PYP+  EK +L+E TGL   Q++NWF N+R+R
Sbjct: 240 ARTTLLDWWNHHYRWPYPTEEEKAKLSEITGLDQKQINNWFINQRKR 286



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 155 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           +R+ L DW+ H+   PYP+  EK +L+E TGL   Q++NWF
Sbjct: 240 ARTTLLDWWNHHYRWPYPTEEEKAKLSEITGLDQKQINNWF 280


>gi|332672666|gb|AEE87260.1| pre-B-cell leukemia transcription factor 1 (PBX1) [Sepia
           officinalis]
          Length = 148

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 18  FSKQATEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 68



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 18  FSKQATEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 67


>gi|30584839|gb|AAP36672.1| Homo sapiens pre-B-cell leukemia transcription factor 1 [synthetic
           construct]
          Length = 348

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|47228232|emb|CAG07627.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 338

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF N+R R
Sbjct: 148 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRIR 198



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF +  I
Sbjct: 148 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRI 197


>gi|313221485|emb|CBY32233.1| unnamed protein product [Oikopleura dioica]
          Length = 304

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 213 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 263



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPN 202
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I    N
Sbjct: 213 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKN 267


>gi|72000786|ref|NP_001024174.1| Protein UNC-62, isoform f [Caenorhabditis elegans]
 gi|18182381|gb|AAL65142.1|AF427474_1 UNC-62 splice variant 1a-7a [Caenorhabditis elegans]
 gi|351063977|emb|CCD72266.1| Protein UNC-62, isoform f [Caenorhabditis elegans]
          Length = 560

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 19/78 (24%)

Query: 314 GAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEA 370
           G +GK R R  FP                +++ + LR W   N   PYPS  +K++LA+ 
Sbjct: 384 GRIGKSRGRGIFP----------------KQATNRLRQWLFQNLTHPYPSEEQKKQLAKE 427

Query: 371 TGLTTTQVSNWFKNRRQR 388
           TGLT  QV+NWF N R+R
Sbjct: 428 TGLTILQVNNWFINARRR 445



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F +++ + LR W   N   PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 395 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINA 442


>gi|426387966|ref|XP_004060433.1| PREDICTED: pre-B-cell leukemia transcription factor 4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 375

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R 
Sbjct: 208 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 267

Query: 388 R 388
           R
Sbjct: 268 R 268



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 208 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 267


>gi|45198470|ref|NP_985499.1| AFL049Cp [Ashbya gossypii ATCC 10895]
 gi|44984421|gb|AAS53323.1| AFL049Cp [Ashbya gossypii ATCC 10895]
 gi|374108728|gb|AEY97634.1| FAFL049Cp [Ashbya gossypii FDAG1]
          Length = 257

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L +W   +  NPYPSP+EK+EL + TGL   Q+SNWF N R+R
Sbjct: 145 ILNEWLRNHYDNPYPSPQEKKELLKQTGLNPVQLSNWFINVRRR 188



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L +W   +  NPYPSP+EK+EL + TGL   Q+SNWF
Sbjct: 145 ILNEWLRNHYDNPYPSPQEKKELLKQTGLNPVQLSNWF 182


>gi|295913576|gb|ADG58034.1| transcription factor [Lycoris longituba]
          Length = 240

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E+S SVLR W + H  +PYP   +K+ LA+ TGLT +QVSNWF N R R
Sbjct: 136 ERSVSVLRAWLFEHFLHPYPKDSDKKMLAKQTGLTRSQVSNWFINARVR 184



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           E+S SVLR W + H  +PYP   +K+ LA+ TGLT +QVSNWF +A +
Sbjct: 136 ERSVSVLRAWLFEHFLHPYPKDSDKKMLAKQTGLTRSQVSNWFINARV 183


>gi|410928520|ref|XP_003977648.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           3 [Takifugu rubripes]
          Length = 420

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRIR 288



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF +  I
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRI 287


>gi|345797793|ref|XP_003434357.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Canis lupus
           familiaris]
 gi|410986579|ref|XP_003999587.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Felis catus]
          Length = 347

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 157 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 207



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 157 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 206


>gi|338724769|ref|XP_003365012.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Equus caballus]
          Length = 347

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|7110681|ref|NP_032809.1| pre-B-cell leukemia transcription factor 1 isoform b [Mus musculus]
 gi|209863018|ref|NP_001094151.1| pre-B-cell leukemia transcription factor 1 isoform b [Rattus
           norvegicus]
 gi|326320048|ref|NP_001191890.1| pre-B-cell leukemia transcription factor 1 isoform 2 [Homo sapiens]
 gi|301756735|ref|XP_002914216.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           2 [Ailuropoda melanoleuca]
 gi|332811112|ref|XP_003308629.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Pan
           troglodytes]
 gi|335286585|ref|XP_001927921.3| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Sus scrofa]
 gi|344287031|ref|XP_003415259.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Loxodonta africana]
 gi|345797795|ref|XP_859730.2| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 5
           [Canis lupus familiaris]
 gi|348565791|ref|XP_003468686.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Cavia porcellus]
 gi|410986581|ref|XP_003999588.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Felis catus]
 gi|426332549|ref|XP_004027866.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 2
           [Gorilla gorilla gorilla]
 gi|456109|gb|AAA21832.1| homeobox protein [Mus musculus]
 gi|2432011|gb|AAB71192.1| PBX1b [Mus musculus]
 gi|30582249|gb|AAP35351.1| pre-B-cell leukemia transcription factor 1 [Homo sapiens]
 gi|119611147|gb|EAW90741.1| pre-B-cell leukemia transcription factor 1, isoform CRA_c [Homo
           sapiens]
 gi|149058117|gb|EDM09274.1| pre-B-cell leukemia transcription factor 1 (predicted), isoform
           CRA_a [Rattus norvegicus]
 gi|171847215|gb|AAI61983.1| Pbx1 protein [Rattus norvegicus]
          Length = 347

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|380746849|gb|AFE48355.1| shootmeristemless-like homeodomain protein, partial [Cuscuta
           pentagona]
          Length = 210

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R  L DW+T +   PYPS  +K  LAEATGL   Q++NWF N+R+R
Sbjct: 114 EARQQLLDWWTRHYKWPYPSESQKVALAEATGLDQKQINNWFINQRKR 161



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R  L DW+T +   PYPS  +K  LAEATGL   Q++NWF
Sbjct: 114 EARQQLLDWWTRHYKWPYPSESQKVALAEATGLDQKQINNWF 155


>gi|348501244|ref|XP_003438180.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           2 [Oreochromis niloticus]
          Length = 345

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 288



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTS 204
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I    N S
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIS 294


>gi|297798662|ref|XP_002867215.1| hypothetical protein ARALYDRAFT_491396 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313051|gb|EFH43474.1| hypothetical protein ARALYDRAFT_491396 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 472

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           EKS SVLR W   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 380 EKSVSVLRTWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVR 428



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           EKS SVLR W   N   PYP   EK  LA  +GLT +QVSNWF +A +
Sbjct: 380 EKSVSVLRTWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARV 427


>gi|297281401|ref|XP_001084131.2| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           2 [Macaca mulatta]
 gi|332811115|ref|XP_003308630.1| PREDICTED: pre-B-cell leukemia transcription factor 1 [Pan
           troglodytes]
 gi|335286583|ref|XP_003355127.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Sus scrofa]
 gi|338724771|ref|XP_003365013.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Equus caballus]
 gi|426332551|ref|XP_004027867.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 3
           [Gorilla gorilla gorilla]
 gi|441634920|ref|XP_003258842.2| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 1
           [Nomascus leucogenys]
          Length = 347

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 157 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 207



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 157 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 206


>gi|224122928|ref|XP_002318951.1| predicted protein [Populus trichocarpa]
 gi|222857327|gb|EEE94874.1| predicted protein [Populus trichocarpa]
          Length = 258

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 3/47 (6%)

Query: 345 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++++L DW+ H+   PYP+  EK +L+E TGL   Q++NWF N+R+R
Sbjct: 186 AKTLLLDWWNHHYRWPYPTEEEKAKLSEITGLDQKQINNWFINQRKR 232



 Score = 44.7 bits (104), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 155 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++++L DW+ H+   PYP+  EK +L+E TGL   Q++NWF
Sbjct: 186 AKTLLLDWWNHHYRWPYPTEEEKAKLSEITGLDQKQINNWF 226


>gi|444726592|gb|ELW67116.1| Pre-B-cell leukemia transcription factor 4 [Tupaia chinensis]
          Length = 445

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL  + Y+H  NPYPS   K ELA   GLT +QVSNWF N+R R
Sbjct: 191 FSKQATEVLNKYFYSHLSNPYPSEEAKEELARKGGLTVSQVSNWFGNKRIR 241



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL  + Y+H  NPYPS   K ELA   GLT +QVSNWF +  I
Sbjct: 191 FSKQATEVLNKYFYSHLSNPYPSEEAKEELARKGGLTVSQVSNWFGNKRI 240


>gi|338724773|ref|XP_003365014.1| PREDICTED: pre-B-cell leukemia transcription factor 1 isoform 4
           [Equus caballus]
          Length = 332

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 166 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 216



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 166 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 215


>gi|56694842|gb|AAW23083.1| Pbx [Oikopleura dioica]
          Length = 275

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 184 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 234



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPN 202
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I    N
Sbjct: 184 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKN 238


>gi|50285627|ref|XP_445242.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524546|emb|CAG58148.1| unnamed protein product [Candida glabrata]
          Length = 221

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF N R+R
Sbjct: 89  ILNQWLLDHIHNPYPTQQEKRDLLIKTGLTKIQLSNWFINVRRR 132



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L  W   + HNPYP+ +EKR+L   TGLT  Q+SNWF
Sbjct: 89  ILNQWLLDHIHNPYPTQQEKRDLLIKTGLTKIQLSNWF 126


>gi|340711688|ref|XP_003394403.1| PREDICTED: homeobox protein extradenticle-like [Bombus terrestris]
          Length = 423

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 257 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 307



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 257 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 306


>gi|242804628|ref|XP_002484413.1| homeobox and C2H2 transcription factor, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218717758|gb|EED17179.1| homeobox and C2H2 transcription factor, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 595

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 348 VLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQ 394
            LR W+   + +PYP+  EK ELA  +GLT TQ  NWF N R+R R A++
Sbjct: 236 ALRQWFFAHSDHPYPTEEEKNELARESGLTRTQTQNWFINARRRQRIADK 285



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 158 VLRDWY---THNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
            LR W+   + +PYP+  EK ELA  +GLT TQ  NWF +A
Sbjct: 236 ALRQWFFAHSDHPYPTEEEKNELARESGLTRTQTQNWFINA 276


>gi|355709416|gb|AES03584.1| pre-B-cell leukemia homeobox 1 [Mustela putorius furo]
          Length = 360

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 267 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 317



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 267 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 316


>gi|313215656|emb|CBY17802.1| unnamed protein product [Oikopleura dioica]
          Length = 108

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 17  FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 67



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 17  FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 66


>gi|355755647|gb|EHH59394.1| Homeobox protein PBX4, partial [Macaca fascicularis]
          Length = 335

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQ 387
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R 
Sbjct: 168 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 227

Query: 388 R 388
           R
Sbjct: 228 R 228



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 168 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 227


>gi|195035281|ref|XP_001989106.1| GH10229 [Drosophila grimshawi]
 gi|193905106|gb|EDW03973.1| GH10229 [Drosophila grimshawi]
          Length = 333

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 322 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQV 378
           RR +P    +     T   F    + +L+DW      NPYPS  EK+ LA  TGLT TQ+
Sbjct: 15  RRAWPPEDDLQLARATKRLFTPDIKRMLKDWLIRRRDNPYPSREEKKLLAGETGLTYTQI 74

Query: 379 SNWFKNRRQRDRAAEQK 395
            NWF N R++ + +E++
Sbjct: 75  CNWFANWRRKLKNSERE 91



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 132 RRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYTH---NPYPSPREKRELAEATGLTTTQV 188
           RR +P    +     T   F    + +L+DW      NPYPS  EK+ LA  TGLT TQ+
Sbjct: 15  RRAWPPEDDLQLARATKRLFTPDIKRMLKDWLIRRRDNPYPSREEKKLLAGETGLTYTQI 74

Query: 189 SNWFSS 194
            NWF++
Sbjct: 75  CNWFAN 80


>gi|12697320|emb|CAC28213.1| Pbx4 protein [Mus musculus]
          Length = 273

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 199 FSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIR 249



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNT 203
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I    NT
Sbjct: 199 FSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIRYKKNT 254


>gi|345479976|ref|XP_001604911.2| PREDICTED: homeobox protein extradenticle-like isoform 1 [Nasonia
           vitripennis]
          Length = 390

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 256 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 306



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 256 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 305


>gi|296486204|tpg|DAA28317.1| TPA: pre-B-cell leukemia homeobox 4-like [Bos taurus]
          Length = 382

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 227 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRIR 277



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 227 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRI 276


>gi|328776690|ref|XP_392297.4| PREDICTED: homeobox protein extradenticle [Apis mellifera]
          Length = 420

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 258 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 308



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 258 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 307


>gi|301753987|ref|XP_002912866.1| PREDICTED: pre-B-cell leukemia transcription factor 4-like
           [Ailuropoda melanoleuca]
          Length = 392

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R   +++    Q
Sbjct: 235 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRIRYKKNMGKFQ 294

Query: 395 KDGSVHSFRVNI 406
           ++ ++++ ++ +
Sbjct: 295 EEATIYTTKMTV 306



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 235 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRI 284


>gi|158298056|ref|XP_318146.2| AGAP004696-PA [Anopheles gambiae str. PEST]
 gi|190359338|sp|Q7PMT1.2|EXD_ANOGA RecName: Full=Homeobox protein extradenticle
 gi|157014624|gb|EAA13242.3| AGAP004696-PA [Anopheles gambiae str. PEST]
          Length = 362

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 233 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 283



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 233 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 282


>gi|297381069|gb|ADI39642.1| extradenticle [Polyrhachis vicina]
          Length = 391

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 257 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 307



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 257 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 306


>gi|293335141|ref|NP_001168681.1| uncharacterized protein LOC100382470 [Zea mays]
 gi|223950183|gb|ACN29175.1| unknown [Zea mays]
 gi|413949054|gb|AFW81703.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 549

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNWF N R R
Sbjct: 323 ERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 371



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           E++ SVLR W + H  +PYP+  +K+ LA+ TGLT  QVSNWF +A +
Sbjct: 323 ERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARV 370


>gi|170044999|ref|XP_001850112.1| homeobox protein extradenticle [Culex quinquefasciatus]
 gi|167868064|gb|EDS31447.1| homeobox protein extradenticle [Culex quinquefasciatus]
          Length = 288

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 157 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 207



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 157 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 206


>gi|291413338|ref|XP_002722932.1| PREDICTED: Meis1, myeloid ecotropic viral integration site 1
           homolog 3 [Oryctolagus cuniculus]
          Length = 472

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 151 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSAN------ITSSP 201
           F + + +++R W   +  +PYPS  +K++LA+ TGLT  QV+NWF +A       +    
Sbjct: 367 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQS 426

Query: 202 NTSTSTASISP---ILPSFGFTQEQVACVCEVLQQSGNIERLGRFL 244
           N +   A+ SP    L  +  TQ+QV      +  S N+E   R+L
Sbjct: 427 NRTGQGAAFSPEGQPLAGYAETQQQVTVRPGSVGMSLNVEGEWRYL 472



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W   +  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 367 FPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 417


>gi|224142875|ref|XP_002324760.1| predicted protein [Populus trichocarpa]
 gi|222866194|gb|EEF03325.1| predicted protein [Populus trichocarpa]
          Length = 323

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E+S SVLR W   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 235 ERSVSVLRAWMFQNFLHPYPKDAEKHLLAAKSGLTRSQVSNWFINARVR 283



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           E+S SVLR W   N   PYP   EK  LA  +GLT +QVSNWF +A +
Sbjct: 235 ERSVSVLRAWMFQNFLHPYPKDAEKHLLAAKSGLTRSQVSNWFINARV 282


>gi|259013334|ref|NP_001158431.1| Pbx homeobox protein [Saccoglossus kowalevskii]
 gi|196475497|gb|ACG76359.1| Pbx homeobox protein [Saccoglossus kowalevskii]
          Length = 389

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T  QVSNWF N+R R
Sbjct: 256 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVAQVSNWFGNKRIR 306



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T  QVSNWF +  I
Sbjct: 256 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVAQVSNWFGNKRI 305


>gi|115445133|ref|NP_001046346.1| Os02g0226600 [Oryza sativa Japonica Group]
 gi|49388535|dbj|BAD25657.1| putative homeobox protein [Oryza sativa Japonica Group]
 gi|113535877|dbj|BAF08260.1| Os02g0226600 [Oryza sativa Japonica Group]
 gi|222622460|gb|EEE56592.1| hypothetical protein OsJ_05952 [Oryza sativa Japonica Group]
          Length = 539

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 41  CASELKSNQDRTCQQCSTITHRTTKSLALPTSRLVPIQAHPQLALVLSYQALASHKSIFD 100
           C  E++S    T  + +T+TH T ++  + +S +    AH  ++ +  Y  L   + I  
Sbjct: 341 CLDEIQS----TTARFNTLTHATARAAGMSSSSICAPFAHRAVSAM--YHGL--RRRIAG 392

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYR------VRRKFPLPRTIWDGEETSY----C 150
           +++++     + P +  +SSS +    + R      +++ + + + +  GE+  +     
Sbjct: 393 EIMSAAAAAGR-PCRGGESSSAVTGGERERSWESAFIQKHWAV-QQLRRGEQQCWRPQRG 450

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
             EKS +VL+ W   N   PYP   EK  LA  +GL+  QVSNWF +A +
Sbjct: 451 LPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARV 500



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             EKS +VL+ W   N   PYP   EK  LA  +GL+  QVSNWF N R R
Sbjct: 451 LPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVR 501


>gi|47207112|emb|CAF95715.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 343

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF N+R R
Sbjct: 153 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRIR 203



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF +  I
Sbjct: 153 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRI 202


>gi|7858|emb|CAA79313.1| Dpbx [Drosophila melanogaster]
          Length = 365

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|363583668|gb|AEW27301.1| pre B-cell leukemia transcription factor 1 [Columba livia]
          Length = 174

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 77  FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 127



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 77  FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 126


>gi|256071737|ref|XP_002572195.1| pre-B-cell leukemia transcription factor 1 2 3 4 (pbx) [Schistosoma
           mansoni]
 gi|353229420|emb|CCD75591.1| putative pre-B-cell leukemia transcription factor 1, 2,3, 4 (pbx)
           [Schistosoma mansoni]
          Length = 312

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 163 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 213



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 163 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 212


>gi|195114442|ref|XP_002001776.1| GI15136 [Drosophila mojavensis]
 gi|193912351|gb|EDW11218.1| GI15136 [Drosophila mojavensis]
          Length = 324

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 15/83 (18%)

Query: 322 RRKFP------LPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATG 372
           RR +P      LPRT          F    + +L+DW      NPYPS  EK++LA  TG
Sbjct: 15  RRAWPPEDDLHLPRT------AKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAGETG 68

Query: 373 LTTTQVSNWFKNRRQRDRAAEQK 395
           LT TQ+ NWF N R++ + +E++
Sbjct: 69  LTYTQICNWFANWRRKLKNSERE 91



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 15/72 (20%)

Query: 132 RRKFP------LPRTIWDGEETSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATG 182
           RR +P      LPRT          F    + +L+DW      NPYPS  EK++LA  TG
Sbjct: 15  RRAWPPEDDLHLPRT------AKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAGETG 68

Query: 183 LTTTQVSNWFSS 194
           LT TQ+ NWF++
Sbjct: 69  LTYTQICNWFAN 80


>gi|55740695|gb|AAV63995.1| homeobox transcription factor KN3 [Pinus strobus]
 gi|55740697|gb|AAV63996.1| homeobox transcription factor KN3 [Picea glauca]
 gi|55740699|gb|AAV63997.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82908244|gb|ABB93311.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908246|gb|ABB93312.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908248|gb|ABB93313.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908250|gb|ABB93314.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908252|gb|ABB93315.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908254|gb|ABB93316.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908256|gb|ABB93317.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908258|gb|ABB93318.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908260|gb|ABB93319.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908262|gb|ABB93320.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908264|gb|ABB93321.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908266|gb|ABB93322.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908268|gb|ABB93323.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908270|gb|ABB93324.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908272|gb|ABB93325.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908274|gb|ABB93326.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908276|gb|ABB93327.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908278|gb|ABB93328.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908280|gb|ABB93329.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908282|gb|ABB93330.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908284|gb|ABB93331.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908286|gb|ABB93332.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908288|gb|ABB93333.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908290|gb|ABB93334.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908292|gb|ABB93335.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908294|gb|ABB93336.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908296|gb|ABB93337.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908298|gb|ABB93338.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908300|gb|ABB93339.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908302|gb|ABB93340.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908304|gb|ABB93341.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908306|gb|ABB93342.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908308|gb|ABB93343.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908310|gb|ABB93344.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908312|gb|ABB93345.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908314|gb|ABB93346.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908316|gb|ABB93347.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908318|gb|ABB93348.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908320|gb|ABB93349.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908322|gb|ABB93350.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908324|gb|ABB93351.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908326|gb|ABB93352.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908328|gb|ABB93353.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908330|gb|ABB93354.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908332|gb|ABB93355.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908334|gb|ABB93356.1| homeobox transcription factor KN3 [Picea abies]
 gi|82909262|gb|ABB93801.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909264|gb|ABB93802.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909266|gb|ABB93803.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909268|gb|ABB93804.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909270|gb|ABB93805.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909272|gb|ABB93806.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909274|gb|ABB93807.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909276|gb|ABB93808.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909278|gb|ABB93809.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909280|gb|ABB93810.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909282|gb|ABB93811.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909284|gb|ABB93812.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909286|gb|ABB93813.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909288|gb|ABB93814.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909290|gb|ABB93815.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909292|gb|ABB93816.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909294|gb|ABB93817.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909296|gb|ABB93818.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909298|gb|ABB93819.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909300|gb|ABB93820.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909302|gb|ABB93821.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909304|gb|ABB93822.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909306|gb|ABB93823.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909308|gb|ABB93824.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909310|gb|ABB93825.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909312|gb|ABB93826.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909314|gb|ABB93827.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909316|gb|ABB93828.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909318|gb|ABB93829.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909320|gb|ABB93830.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909322|gb|ABB93831.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909324|gb|ABB93832.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909326|gb|ABB93833.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909328|gb|ABB93834.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909330|gb|ABB93835.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909332|gb|ABB93836.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909334|gb|ABB93837.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909336|gb|ABB93838.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909338|gb|ABB93839.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909340|gb|ABB93840.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909342|gb|ABB93841.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909344|gb|ABB93842.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909346|gb|ABB93843.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909348|gb|ABB93844.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909350|gb|ABB93845.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909352|gb|ABB93846.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909354|gb|ABB93847.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909356|gb|ABB93848.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909358|gb|ABB93849.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909360|gb|ABB93850.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909362|gb|ABB93851.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909364|gb|ABB93852.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82911510|gb|ABB94897.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911512|gb|ABB94898.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911514|gb|ABB94899.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911516|gb|ABB94900.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911518|gb|ABB94901.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911520|gb|ABB94902.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911522|gb|ABB94903.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911524|gb|ABB94904.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911526|gb|ABB94905.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911528|gb|ABB94906.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911530|gb|ABB94907.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911532|gb|ABB94908.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911534|gb|ABB94909.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911536|gb|ABB94910.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911538|gb|ABB94911.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911540|gb|ABB94912.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911542|gb|ABB94913.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911544|gb|ABB94914.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911546|gb|ABB94915.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911548|gb|ABB94916.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911550|gb|ABB94917.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911552|gb|ABB94918.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911554|gb|ABB94919.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911556|gb|ABB94920.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911558|gb|ABB94921.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911560|gb|ABB94922.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911562|gb|ABB94923.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911564|gb|ABB94924.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911566|gb|ABB94925.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911568|gb|ABB94926.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911570|gb|ABB94927.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911572|gb|ABB94928.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911574|gb|ABB94929.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911576|gb|ABB94930.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911578|gb|ABB94931.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911580|gb|ABB94932.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911582|gb|ABB94933.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911584|gb|ABB94934.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911586|gb|ABB94935.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911588|gb|ABB94936.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911590|gb|ABB94937.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911592|gb|ABB94938.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911594|gb|ABB94939.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911596|gb|ABB94940.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911598|gb|ABB94941.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911600|gb|ABB94942.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911602|gb|ABB94943.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911604|gb|ABB94944.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911606|gb|ABB94945.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911608|gb|ABB94946.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911610|gb|ABB94947.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911612|gb|ABB94948.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911614|gb|ABB94949.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911616|gb|ABB94950.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911618|gb|ABB94951.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911620|gb|ABB94952.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911622|gb|ABB94953.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911624|gb|ABB94954.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911626|gb|ABB94955.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911628|gb|ABB94956.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911630|gb|ABB94957.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911632|gb|ABB94958.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911634|gb|ABB94959.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911636|gb|ABB94960.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911638|gb|ABB94961.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911640|gb|ABB94962.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911642|gb|ABB94963.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911644|gb|ABB94964.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911646|gb|ABB94965.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911648|gb|ABB94966.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911650|gb|ABB94967.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911652|gb|ABB94968.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911654|gb|ABB94969.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911656|gb|ABB94970.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911658|gb|ABB94971.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911660|gb|ABB94972.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911662|gb|ABB94973.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911664|gb|ABB94974.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911666|gb|ABB94975.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911668|gb|ABB94976.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911670|gb|ABB94977.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911672|gb|ABB94978.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911674|gb|ABB94979.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911676|gb|ABB94980.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911678|gb|ABB94981.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911680|gb|ABB94982.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911682|gb|ABB94983.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911684|gb|ABB94984.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911686|gb|ABB94985.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911688|gb|ABB94986.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911690|gb|ABB94987.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911692|gb|ABB94988.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911694|gb|ABB94989.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911696|gb|ABB94990.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911698|gb|ABB94991.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911700|gb|ABB94992.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911702|gb|ABB94993.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911704|gb|ABB94994.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911706|gb|ABB94995.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911708|gb|ABB94996.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911710|gb|ABB94997.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911712|gb|ABB94998.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911714|gb|ABB94999.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911716|gb|ABB95000.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911718|gb|ABB95001.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911720|gb|ABB95002.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911722|gb|ABB95003.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911724|gb|ABB95004.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911726|gb|ABB95005.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911728|gb|ABB95006.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911730|gb|ABB95007.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911732|gb|ABB95008.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911734|gb|ABB95009.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911736|gb|ABB95010.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911738|gb|ABB95011.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911740|gb|ABB95012.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911742|gb|ABB95013.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911744|gb|ABB95014.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911746|gb|ABB95015.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911748|gb|ABB95016.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911750|gb|ABB95017.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911752|gb|ABB95018.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911754|gb|ABB95019.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911756|gb|ABB95020.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911758|gb|ABB95021.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911760|gb|ABB95022.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911762|gb|ABB95023.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911764|gb|ABB95024.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911766|gb|ABB95025.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911768|gb|ABB95026.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911770|gb|ABB95027.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911772|gb|ABB95028.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911774|gb|ABB95029.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911776|gb|ABB95030.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911778|gb|ABB95031.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911780|gb|ABB95032.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911782|gb|ABB95033.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911784|gb|ABB95034.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911786|gb|ABB95035.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911788|gb|ABB95036.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911790|gb|ABB95037.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911792|gb|ABB95038.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911794|gb|ABB95039.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911796|gb|ABB95040.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911798|gb|ABB95041.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911800|gb|ABB95042.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911802|gb|ABB95043.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911804|gb|ABB95044.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911806|gb|ABB95045.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911808|gb|ABB95046.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911810|gb|ABB95047.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911812|gb|ABB95048.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911814|gb|ABB95049.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911816|gb|ABB95050.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911818|gb|ABB95051.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911820|gb|ABB95052.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911822|gb|ABB95053.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911824|gb|ABB95054.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911826|gb|ABB95055.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911828|gb|ABB95056.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911830|gb|ABB95057.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911832|gb|ABB95058.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911834|gb|ABB95059.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911836|gb|ABB95060.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911838|gb|ABB95061.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911840|gb|ABB95062.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911842|gb|ABB95063.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911844|gb|ABB95064.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911846|gb|ABB95065.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911848|gb|ABB95066.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911850|gb|ABB95067.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911852|gb|ABB95068.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911854|gb|ABB95069.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911856|gb|ABB95070.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911858|gb|ABB95071.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911860|gb|ABB95072.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911862|gb|ABB95073.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911864|gb|ABB95074.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911866|gb|ABB95075.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911868|gb|ABB95076.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911870|gb|ABB95077.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911872|gb|ABB95078.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911874|gb|ABB95079.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911876|gb|ABB95080.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911878|gb|ABB95081.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911880|gb|ABB95082.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911882|gb|ABB95083.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911884|gb|ABB95084.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911886|gb|ABB95085.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911888|gb|ABB95086.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911890|gb|ABB95087.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911892|gb|ABB95088.1| homeobox transcription factor KN3 [Picea glauca]
          Length = 134

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)

Query: 344 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF N+R+R
Sbjct: 47  EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKR 94



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 154 KSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           ++R  L DW+T N   PYPS  +K  LAE+TGL   Q++NWF
Sbjct: 47  EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWF 88


>gi|300795621|ref|NP_001179444.1| pre-B-cell leukemia transcription factor 4 [Bos taurus]
          Length = 382

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 227 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRIR 277



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 227 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRI 276


>gi|395328631|gb|EJF61022.1| hypothetical protein DICSQDRAFT_180997 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 658

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 17/80 (21%)

Query: 312 PLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW---YTHNPYPSPREKRELA 368
           P G V +   R++  LP+ + D               L+DW   ++ +PYPS  EK++L 
Sbjct: 370 PSGLVDRPPQRKRGKLPKPVTD--------------FLKDWLHRHSDHPYPSEEEKKQLC 415

Query: 369 EATGLTTTQVSNWFKNRRQR 388
            ATGL+ +QVSNW  N R+R
Sbjct: 416 HATGLSMSQVSNWMINARRR 435



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 24/95 (25%)

Query: 109 VWKSPVKTYQSS-----SIIINIIKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW- 162
           V  SP ++ Q++     S +++    R R K P P T +                L+DW 
Sbjct: 354 VTNSPSRSPQAAPAPNPSGLVDRPPQRKRGKLPKPVTDF----------------LKDWL 397

Query: 163 --YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
             ++ +PYPS  EK++L  ATGL+ +QVSNW  +A
Sbjct: 398 HRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINA 432


>gi|328875265|gb|EGG23630.1| hypothetical protein DFA_05764 [Dictyostelium fasciculatum]
          Length = 426

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 337 TSYCFKEKSRSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           TS    + S+SVL  W   +  +PYP    KR+LA  +G +  QVSNWF N R+R     
Sbjct: 283 TSGALSKSSKSVLLQWVINHLDDPYPPMDVKRQLAAESGQSIAQVSNWFINFRRRSLEKL 342

Query: 394 QKDGSVHSFRVNIGGDSKT 412
           ++  + H    + GG S +
Sbjct: 343 KEQVASHQIEQSTGGPSSS 361


>gi|354483996|ref|XP_003504178.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like
           [Cricetulus griseus]
          Length = 297

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 190 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 240



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 190 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 239


>gi|322781316|gb|EFZ10188.1| hypothetical protein SINV_04396 [Solenopsis invicta]
          Length = 213

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 61  FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 111



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 61  FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 110


>gi|367015408|ref|XP_003682203.1| hypothetical protein TDEL_0F01810 [Torulaspora delbrueckii]
 gi|359749865|emb|CCE92992.1| hypothetical protein TDEL_0F01810 [Torulaspora delbrueckii]
          Length = 256

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 3/44 (6%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           +L  W   +  NPYP+P+EKREL   TGLT  Q+SNWF N R+R
Sbjct: 143 ILNTWLLDHLRNPYPTPQEKRELLIKTGLTKIQLSNWFINVRRR 186



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           +L  W   +  NPYP+P+EKREL   TGLT  Q+SNWF
Sbjct: 143 ILNTWLLDHLRNPYPTPQEKRELLIKTGLTKIQLSNWF 180


>gi|358335726|dbj|GAA54358.1| pre-B-cell leukemia transcription factor [Clonorchis sinensis]
          Length = 357

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 265 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 315



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 265 FSKEATEVLNEYFYSHLANPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 314


>gi|340517663|gb|EGR47906.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1117

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 341 FKEKSRSVLRDWY-THN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  +S  +L++W  THN  PYPS  EK  L   TGL  TQ++NW  N R+R +A   +  
Sbjct: 137 FSRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRST 196

Query: 398 SVH 400
           S H
Sbjct: 197 SPH 199



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDWY-THN--PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F  +S  +L++W  THN  PYPS  EK  L   TGL  TQ++NW ++A
Sbjct: 137 FSRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANA 184


>gi|194763078|ref|XP_001963661.1| GF20172 [Drosophila ananassae]
 gi|190629320|gb|EDV44737.1| GF20172 [Drosophila ananassae]
          Length = 376

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|28797555|gb|AAO47087.1| homeodomain-containing protein [Venturia canescens]
          Length = 456

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)

Query: 330 TIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRR 386
           +I  G +      +++ S++R W  H+   PYP+  EKR++A  T LT  QV+NWF N R
Sbjct: 302 SIRKGRQKRGVLPKQATSIMRAWLFHHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINAR 361

Query: 387 QR 388
           +R
Sbjct: 362 RR 363



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 140 TIWDGEETSYCFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
           +I  G +      +++ S++R W  H+   PYP+  EKR++A  T LT  QV+NWF +A
Sbjct: 302 SIRKGRQKRGVLPKQATSIMRAWLFHHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINA 360


>gi|126002456|ref|XP_001352352.1| GA21419 [Drosophila pseudoobscura pseudoobscura]
 gi|122072797|sp|Q29CT2.1|EXD_DROPS RecName: Full=Homeobox protein extradenticle
 gi|54640619|gb|EAL29404.1| GA21419 [Drosophila pseudoobscura pseudoobscura]
          Length = 376

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|17647403|ref|NP_523360.1| extradenticle, isoform A [Drosophila melanogaster]
 gi|24642377|ref|NP_727923.1| extradenticle, isoform B [Drosophila melanogaster]
 gi|24642379|ref|NP_727924.1| extradenticle, isoform C [Drosophila melanogaster]
 gi|442616520|ref|NP_001259592.1| extradenticle, isoform D [Drosophila melanogaster]
 gi|442616522|ref|NP_001259593.1| extradenticle, isoform E [Drosophila melanogaster]
 gi|194894027|ref|XP_001977992.1| GG17938 [Drosophila erecta]
 gi|195357052|ref|XP_002044928.1| GM11678 [Drosophila sechellia]
 gi|195567036|ref|XP_002107081.1| GD17261 [Drosophila simulans]
 gi|729455|sp|P40427.1|EXD_DROME RecName: Full=Homeobox protein extradenticle; Short=Dpbx
 gi|304678|gb|AAC37182.1| extradenticle [Drosophila melanogaster]
 gi|1002788|gb|AAC46903.1| extradenticle [Drosophila melanogaster]
 gi|7293171|gb|AAF48555.1| extradenticle, isoform A [Drosophila melanogaster]
 gi|7293172|gb|AAF48556.1| extradenticle, isoform B [Drosophila melanogaster]
 gi|16768788|gb|AAL28613.1| LD03509p [Drosophila melanogaster]
 gi|22832323|gb|AAN09379.1| extradenticle, isoform C [Drosophila melanogaster]
 gi|190649641|gb|EDV46919.1| GG17938 [Drosophila erecta]
 gi|194124270|gb|EDW46313.1| GM11678 [Drosophila sechellia]
 gi|194204478|gb|EDX18054.1| GD17261 [Drosophila simulans]
 gi|220942464|gb|ACL83775.1| exd-PA [synthetic construct]
 gi|220953060|gb|ACL89073.1| exd-PA [synthetic construct]
 gi|440216818|gb|AGB95434.1| extradenticle, isoform D [Drosophila melanogaster]
 gi|440216819|gb|AGB95435.1| extradenticle, isoform E [Drosophila melanogaster]
          Length = 376

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|345479978|ref|XP_003424066.1| PREDICTED: homeobox protein extradenticle-like isoform 2 [Nasonia
           vitripennis]
          Length = 402

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 256 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 306



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 256 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 305


>gi|8096557|dbj|BAA96136.1| PBX1B [Gallus gallus]
          Length = 347

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 290



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 240 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 289


>gi|321450618|gb|EFX62563.1| putative homeotic cofactor Extradenticle protein [Daphnia pulex]
          Length = 400

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 258 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 308



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 258 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 307


>gi|281343567|gb|EFB19151.1| hypothetical protein PANDA_000589 [Ailuropoda melanoleuca]
          Length = 305

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R   +++    Q
Sbjct: 178 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRIRYKKNMGKFQ 237

Query: 395 KDGSVHSFRVNI 406
           ++ ++++ ++ +
Sbjct: 238 EEATIYTTKMTV 249



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 178 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARRGGITVSQVSNWFGNKRI 227


>gi|195470190|ref|XP_002087391.1| GE16360 [Drosophila yakuba]
 gi|194173492|gb|EDW87103.1| GE16360 [Drosophila yakuba]
          Length = 298

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 337 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF N R++ + +E
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSE 90

Query: 394 QK 395
           ++
Sbjct: 91  RE 92



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 147 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF++
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFAN 81


>gi|440802859|gb|ELR23783.1| Homeobox domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 94

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 3/46 (6%)

Query: 346 RSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           + V+  W   +  NPYP+  EK EL+  TGLTTTQ+SNWF N R+R
Sbjct: 30  KEVMMAWINEHIANPYPTKEEKEELSLRTGLTTTQISNWFTNARRR 75



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 156 RSVLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           + V+  W   +  NPYP+  EK EL+  TGLTTTQ+SNWF++A
Sbjct: 30  KEVMMAWINEHIANPYPTKEEKEELSLRTGLTTTQISNWFTNA 72


>gi|350580343|ref|XP_003123603.3| PREDICTED: pre-B-cell leukemia transcription factor 4-like [Sus
           scrofa]
          Length = 439

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 284 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIR 334



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 284 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRI 333


>gi|330924038|ref|XP_003300486.1| hypothetical protein PTT_11733 [Pyrenophora teres f. teres 0-1]
 gi|311325368|gb|EFQ91413.1| hypothetical protein PTT_11733 [Pyrenophora teres f. teres 0-1]
          Length = 1000

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 348 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGS 398
           VL+DW   +  +PYP+  EK  L + TGL+T+Q+SNW  N R+R +A  ++  S
Sbjct: 188 VLKDWMLMHIDHPYPTEEEKETLQQQTGLSTSQISNWMANTRRRQKARPKRSAS 241



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 158 VLRDW---YTHNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           VL+DW   +  +PYP+  EK  L + TGL+T+Q+SNW ++
Sbjct: 188 VLKDWMLMHIDHPYPTEEEKETLQQQTGLSTSQISNWMAN 227


>gi|195399041|ref|XP_002058129.1| GJ15917 [Drosophila virilis]
 gi|194150553|gb|EDW66237.1| GJ15917 [Drosophila virilis]
          Length = 374

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 293



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 292


>gi|195133732|ref|XP_002011293.1| GI16078 [Drosophila mojavensis]
 gi|193907268|gb|EDW06135.1| GI16078 [Drosophila mojavensis]
          Length = 375

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 293



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 292


>gi|168011803|ref|XP_001758592.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
 gi|162690202|gb|EDQ76570.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
          Length = 445

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)

Query: 310 GRPLGAVGKY--RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREK 364
           GR +G +     RVR+K  LP +              +R++L+DW+   +H PYPS  EK
Sbjct: 348 GRHIGELKAEFNRVRKKGKLPTS--------------ARTILKDWFNRHSHWPYPSEMEK 393

Query: 365 RELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           + L    GL   Q++NWF N R+R  + E K
Sbjct: 394 QYLQRICGLNLKQINNWFINERKRHWSCEGK 424



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 17/66 (25%)

Query: 130 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWY---THNPYPSPREKRELAEATGLTTT 186
           RVR+K  LP +              +R++L+DW+   +H PYPS  EK+ L    GL   
Sbjct: 360 RVRKKGKLPTS--------------ARTILKDWFNRHSHWPYPSEMEKQYLQRICGLNLK 405

Query: 187 QVSNWF 192
           Q++NWF
Sbjct: 406 QINNWF 411


>gi|58011285|gb|AAW62517.1| KNOTTED1-like protein [Selaginella kraussiana]
          Length = 460

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 3/47 (6%)

Query: 345 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           SR +L +W++ +   PYPS  EK  LAE+TGL   Q++NWF N+R+R
Sbjct: 389 SRQILLNWWSVHYKWPYPSESEKASLAESTGLDQKQINNWFINQRKR 435



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 155 SRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWF 192
           SR +L +W++ +   PYPS  EK  LAE+TGL   Q++NWF
Sbjct: 389 SRQILLNWWSVHYKWPYPSESEKASLAESTGLDQKQINNWF 429


>gi|195479102|ref|XP_002100763.1| GE17244 [Drosophila yakuba]
 gi|194188287|gb|EDX01871.1| GE17244 [Drosophila yakuba]
          Length = 375

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|195059587|ref|XP_001995667.1| GH17639 [Drosophila grimshawi]
 gi|195398807|ref|XP_002058012.1| GJ15726 [Drosophila virilis]
 gi|193896453|gb|EDV95319.1| GH17639 [Drosophila grimshawi]
 gi|194150436|gb|EDW66120.1| GJ15726 [Drosophila virilis]
          Length = 374

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 293



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 243 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 292


>gi|390332258|ref|XP_001197656.2| PREDICTED: homeobox protein Meis1-like [Strongylocentrotus
           purpuratus]
          Length = 434

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 324 FPKSATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 374



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 324 FPKSATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 371


>gi|218190346|gb|EEC72773.1| hypothetical protein OsI_06432 [Oryza sativa Indica Group]
          Length = 539

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 41  CASELKSNQDRTCQQCSTITHRTTKSLALPTSRLVPIQAHPQLALVLSYQALASHKSIFD 100
           C  E++S    T  + +T+TH T ++  + +S +    AH  ++ +  Y  L   + I  
Sbjct: 341 CLDEIQS----TTARFNTLTHATARAAGMSSSSICAPFAHRAVSAM--YHGL--RRRIAG 392

Query: 101 KVVTSYKEVWKSPVKTYQSSSIIINIIKYR------VRRKFPLPRTIWDGEETSY----C 150
           +++++     + P +  +SSS +    + R      +++ + + + +  GE+  +     
Sbjct: 393 EIMSAAAAAGR-PCRGGESSSAVTGGERERSWESAFIQKHWAV-QQLRRGEQQCWRPQRG 450

Query: 151 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
             EKS +VL+ W   N   PYP   EK  LA  +GL+  QVSNWF +A +
Sbjct: 451 LPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARV 500



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
             EKS +VL+ W   N   PYP   EK  LA  +GL+  QVSNWF N R R
Sbjct: 451 LPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVR 501


>gi|195155517|ref|XP_002018650.1| GL25837 [Drosophila persimilis]
 gi|194114803|gb|EDW36846.1| GL25837 [Drosophila persimilis]
          Length = 1109

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 348 VLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQK 395
           +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF N R++ + +E++
Sbjct: 42  MLKDWLIRRRENPYPSREEKKQLAGETGLTYTQICNWFANWRRKLKNSERE 92



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 158 VLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF++
Sbjct: 42  MLKDWLIRRRENPYPSREEKKQLAGETGLTYTQICNWFAN 81


>gi|270001030|gb|EEZ97477.1| hypothetical protein TcasGA2_TC011311 [Tribolium castaneum]
          Length = 334

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 210 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 260



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 27/97 (27%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI---------- 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I          
Sbjct: 210 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQ 269

Query: 198 ------------TSSPNTSTSTASISPILP--SFGFT 220
                        +SP + T T  +SP  P  S G++
Sbjct: 270 EEANLYAAKKAAGASPYSGTPTPMMSPAPPQDSMGYS 306


>gi|19920444|ref|NP_608502.1| CG11617, isoform A [Drosophila melanogaster]
 gi|386768869|ref|NP_001245817.1| CG11617, isoform B [Drosophila melanogaster]
 gi|7296241|gb|AAF51532.1| CG11617, isoform A [Drosophila melanogaster]
 gi|17945101|gb|AAL48611.1| RE08174p [Drosophila melanogaster]
 gi|220942442|gb|ACL83764.1| CG11617-PA [synthetic construct]
 gi|220952664|gb|ACL88875.1| CG11617-PA [synthetic construct]
 gi|383291253|gb|AFH03494.1| CG11617, isoform B [Drosophila melanogaster]
          Length = 294

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 337 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF N R++ + +E
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSE 90

Query: 394 QK 395
           ++
Sbjct: 91  RE 92



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 147 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF++
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFAN 81


>gi|74141104|dbj|BAE22112.1| unnamed protein product [Mus musculus]
          Length = 430

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR---QRDRAAEQ 394
           F +++  VL ++ Y+H  +PYPS   K ELA+  G+T +QVSNWF N+R   +++    Q
Sbjct: 251 FSKQATEVLNEYFYSHLSSPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQ 310

Query: 395 KDGSVHSFRVNI----GGDSKT 412
           ++ ++++ +  +    GG S+T
Sbjct: 311 EEANIYAVKTAVSVAQGGHSRT 332



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  +PYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 251 FSKQATEVLNEYFYSHLSSPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 300


>gi|307950957|gb|ADN97175.1| A2 mating-type protein [Phanerochaete chrysosporium]
          Length = 519

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 36/72 (50%)

Query: 341 FKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDGSVH 400
           FK+ +   L   Y  NPYPS  EK  LA+ TG+   Q++ WF+NRR R +    K    +
Sbjct: 158 FKQAALPTLERAYGDNPYPSRTEKERLAQITGMEYRQINVWFQNRRNRSKKGYPKAYKRY 217

Query: 401 SFRVNIGGDSKT 412
            FR   G    T
Sbjct: 218 HFRHMAGMHDTT 229



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 151 FKEKSRSVLRDWYTHNPYPSPREKRELAEATGLTTTQVSNWF 192
           FK+ +   L   Y  NPYPS  EK  LA+ TG+   Q++ WF
Sbjct: 158 FKQAALPTLERAYGDNPYPSRTEKERLAQITGMEYRQINVWF 199


>gi|195432671|ref|XP_002064340.1| GK20113 [Drosophila willistoni]
 gi|194160425|gb|EDW75326.1| GK20113 [Drosophila willistoni]
          Length = 376

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|195176039|ref|XP_002028669.1| GL10055 [Drosophila persimilis]
 gi|194108907|gb|EDW30950.1| GL10055 [Drosophila persimilis]
          Length = 266

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 135 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 185



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 135 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 184


>gi|194853291|ref|XP_001968136.1| GG24672 [Drosophila erecta]
 gi|190660003|gb|EDV57195.1| GG24672 [Drosophila erecta]
          Length = 298

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 337 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE 393
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF N R++ + +E
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSE 90

Query: 394 QK 395
           ++
Sbjct: 91  RE 92



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 147 TSYCFKEKSRSVLRDWYT---HNPYPSPREKRELAEATGLTTTQVSNWFSS 194
           T   F    + +L+DW      NPYPS  EK++LA  TGLT TQ+ NWF++
Sbjct: 31  TKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFAN 81


>gi|431922055|gb|ELK19228.1| Pre-B-cell leukemia transcription factor 4 [Pteropus alecto]
          Length = 300

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 331 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRR- 386
           + D       F +++  VL ++ Y+H  NPYPS   K+ELA   G+T +QVSNWF N+R 
Sbjct: 158 LLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEVKQELARKGGITVSQVSNWFGNKRI 217

Query: 387 --QRDRAAEQKDGSVHS 401
             +++    Q++ S+++
Sbjct: 218 RYKKNMGKFQEEASIYT 234



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 141 IWDGEETSYCFKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           + D       F +++  VL ++ Y+H  NPYPS   K+ELA   G+T +QVSNWF +  I
Sbjct: 158 LLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEVKQELARKGGITVSQVSNWFGNKRI 217


>gi|358394094|gb|EHK43495.1| hypothetical protein TRIATDRAFT_161626, partial [Trichoderma
           atroviride IMI 206040]
          Length = 1093

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 341 FKEKSRSVLRDWY-THN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F  +S  +L++W  THN  PYPS  EK  L   TGL  TQ++NW  N R+R +A   +  
Sbjct: 172 FSRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRST 231

Query: 398 SVH 400
           S H
Sbjct: 232 SPH 234



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 11/71 (15%)

Query: 151 FKEKSRSVLRDWY-THN--PYPSPREKRELAEATGLTTTQVSNWFSSAN--------ITS 199
           F  +S  +L++W  THN  PYPS  EK  L   TGL  TQ++NW ++A          ++
Sbjct: 172 FSRESVRILKNWLSTHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKAQPPRST 231

Query: 200 SPNTSTSTASI 210
           SP+    +ASI
Sbjct: 232 SPHVGNLSASI 242


>gi|289739669|gb|ADD18582.1| transcription factor PBX [Glossina morsitans morsitans]
          Length = 374

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 295



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 245 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 294


>gi|148707229|gb|EDL39176.1| pre B-cell leukemia transcription factor 1 [Mus musculus]
          Length = 284

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 177 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 227



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 177 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 226


>gi|348538166|ref|XP_003456563.1| PREDICTED: homeobox protein Meis1-like [Oreochromis niloticus]
          Length = 393

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + ++LR W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 282 FPKVATNILRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 332



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + ++LR W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 282 FPKVATNILRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 329


>gi|449467124|ref|XP_004151275.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
          Length = 397

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)

Query: 346 RSVLRDWYTHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           + +LR W  HN  PYPS  EK  LAE+TGL   Q++NWF N+R+R
Sbjct: 312 QQLLRWWELHNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKR 356



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 156 RSVLRDWYTHN--PYPSPREKRELAEATGLTTTQVSNWF 192
           + +LR W  HN  PYPS  EK  LAE+TGL   Q++NWF
Sbjct: 312 QQLLRWWELHNKWPYPSEAEKLALAESTGLDQKQINNWF 350


>gi|444730598|gb|ELW70976.1| Pre-B-cell leukemia transcription factor 1 [Tupaia chinensis]
          Length = 310

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF N+R R
Sbjct: 187 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIR 237



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T +QVSNWF +  I
Sbjct: 187 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 236


>gi|56694846|gb|AAW23085.1| Meis-a, partial [Oikopleura dioica]
          Length = 176

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 340 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF N R+R
Sbjct: 32  LFPKQATNILRAWLFQNLTHPYPSEEQKKHLSQQTGLTILQVNNWFINARRR 83



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 150 CFKEKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSA 195
            F +++ ++LR W   N   PYPS  +K+ L++ TGLT  QV+NWF +A
Sbjct: 32  LFPKQATNILRAWLFQNLTHPYPSEEQKKHLSQQTGLTILQVNNWFINA 80


>gi|410928518|ref|XP_003977647.1| PREDICTED: pre-B-cell leukemia transcription factor 1-like isoform
           2 [Takifugu rubripes]
          Length = 345

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF N+R R
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRIR 288



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  +L ++ Y+H  NPYPS   K ELA+  G+T  QVSNWF +  I
Sbjct: 238 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVAQVSNWFGNKRI 287


>gi|356562195|ref|XP_003549357.1| PREDICTED: uncharacterized protein LOC100812648 [Glycine max]
          Length = 571

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 343 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           E+S SVLR W   N   PYP   EK  LA  +GLT +QVSNWF N R R
Sbjct: 480 ERSVSVLRTWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 528



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 153 EKSRSVLRDWYTHN---PYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           E+S SVLR W   N   PYP   EK  LA  +GLT +QVSNWF +A +
Sbjct: 480 ERSVSVLRTWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARV 527


>gi|148696811|gb|EDL28758.1| mCG23084, isoform CRA_c [Mus musculus]
          Length = 355

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 199 FSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIR 249



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANITSSPNTS 204
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I    NT 
Sbjct: 199 FSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIRYKKNTG 255


>gi|426230242|ref|XP_004009186.1| PREDICTED: pre-B-cell leukemia transcription factor 4 [Ovis aries]
          Length = 358

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEETKEELARRGGITVSQVSNWFGNKRIR 241



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 191 FSKQATEVLNEYFYSHLSNPYPSEETKEELARRGGITVSQVSNWFGNKRI 240


>gi|327259414|ref|XP_003214532.1| PREDICTED: homeobox protein Meis2-like isoform 4 [Anolis
           carolinensis]
          Length = 470

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


>gi|327259412|ref|XP_003214531.1| PREDICTED: homeobox protein Meis2-like isoform 3 [Anolis
           carolinensis]
          Length = 477

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


>gi|224051358|ref|XP_002200533.1| PREDICTED: homeobox protein Meis2 isoform 2 [Taeniopygia guttata]
          Length = 470

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


>gi|224051356|ref|XP_002200532.1| PREDICTED: homeobox protein Meis2 isoform 1 [Taeniopygia guttata]
          Length = 477

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


>gi|20302758|gb|AAM18882.1|AF391292_1 unknown [Branchiostoma floridae]
          Length = 319

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 16/70 (22%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDG 397
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF N+R R         
Sbjct: 155 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR--------- 205

Query: 398 SVHSFRVNIG 407
               F+ NIG
Sbjct: 206 ----FKKNIG 211



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSANI 197
           F +++  VL ++ Y+H  NPYPS   K ELA   G+T +QVSNWF +  I
Sbjct: 155 FSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRI 204


>gi|449529644|ref|XP_004171808.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
           2-like [Cucumis sativus]
          Length = 397

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)

Query: 346 RSVLRDWYTHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           + +LR W  HN  PYPS  EK  LAE+TGL   Q++NWF N+R+R
Sbjct: 312 QQLLRWWELHNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKR 356



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 156 RSVLRDWYTHN--PYPSPREKRELAEATGLTTTQVSNWF 192
           + +LR W  HN  PYPS  EK  LAE+TGL   Q++NWF
Sbjct: 312 QQLLRWWELHNKWPYPSEAEKLALAESTGLDQKQINNWF 350


>gi|300796067|ref|NP_001178198.1| homeobox protein Meis2 [Bos taurus]
 gi|296483388|tpg|DAA25503.1| TPA: Meis homeobox 2 isoform 1 [Bos taurus]
          Length = 477

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


>gi|355692589|gb|EHH27192.1| Meis1-related protein 1, partial [Macaca mulatta]
          Length = 472

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 278 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 328



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 278 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 325


>gi|291403269|ref|XP_002718036.1| PREDICTED: homeobox protein Meis2-like isoform 1 [Oryctolagus
           cuniculus]
          Length = 477

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 341 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 388
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF N R+R
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)

Query: 151 FKEKSRSVLRDW-YTH--NPYPSPREKRELAEATGLTTTQVSNWFSSA 195
           F + + +++R W + H  +PYPS  +K++LA+ TGLT  QV+NWF +A
Sbjct: 283 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 330


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.130    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,453,894,202
Number of Sequences: 23463169
Number of extensions: 257884307
Number of successful extensions: 751273
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5263
Number of HSP's successfully gapped in prelim test: 644
Number of HSP's that attempted gapping in prelim test: 738703
Number of HSP's gapped (non-prelim): 12747
length of query: 414
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 269
effective length of database: 8,957,035,862
effective search space: 2409442646878
effective search space used: 2409442646878
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)