Query psy14874
Match_columns 1015
No_of_seqs 584 out of 3905
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 23:01:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 3.9E-56 1.3E-60 515.8 47.8 395 13-461 6-400 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 4.2E-56 1.5E-60 515.6 46.9 397 42-568 2-398 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.5E-39 5E-44 362.5 33.7 262 18-312 22-295 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 5.3E-39 1.8E-43 358.0 33.9 300 121-526 25-330 (337)
5 3utm_A Tankyrase-1; tankyrase, 100.0 3.2E-38 1.1E-42 354.1 33.3 283 15-314 18-304 (351)
6 3utm_A Tankyrase-1; tankyrase, 100.0 7.4E-39 2.5E-43 359.4 26.5 311 83-521 20-333 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 7.9E-38 2.7E-42 339.7 32.7 265 19-287 3-283 (285)
8 1wdy_A 2-5A-dependent ribonucl 100.0 6E-37 2E-41 332.8 31.3 270 335-640 4-279 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 3.9E-38 1.3E-42 355.2 20.6 266 334-639 92-371 (373)
10 3d9h_A CDNA FLJ77766, highly s 100.0 2.4E-36 8E-41 327.2 25.7 255 17-280 11-276 (285)
11 3d9h_A CDNA FLJ77766, highly s 100.0 6E-36 2.1E-40 324.0 26.5 258 333-639 12-278 (285)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 3.5E-36 1.2E-40 320.2 24.0 232 13-281 2-247 (253)
13 2xai_A ASB-9, ankyrin repeat a 100.0 9.9E-36 3.4E-40 318.2 25.3 250 20-311 2-259 (261)
14 3ljn_A Hypothetical protein; a 100.0 2.4E-36 8.4E-41 340.4 19.8 262 14-313 13-312 (364)
15 3b7b_A Euchromatic histone-lys 100.0 6.9E-35 2.4E-39 307.1 27.9 227 14-277 4-230 (237)
16 2fo1_E LIN-12 protein; beta-ba 100.0 4.4E-36 1.5E-40 338.5 19.7 283 24-314 69-370 (373)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-35 6.6E-40 314.4 23.3 227 369-639 8-248 (253)
18 1k1a_A B-cell lymphoma 3-encod 100.0 4.5E-35 1.5E-39 309.5 23.2 230 14-280 2-239 (241)
19 1oy3_D Transcription factor in 100.0 1.7E-34 5.7E-39 313.1 21.4 252 14-268 2-269 (282)
20 2xai_A ASB-9, ankyrin repeat a 100.0 5.6E-34 1.9E-38 304.6 23.8 220 370-638 2-221 (261)
21 3aji_A 26S proteasome non-ATPa 100.0 9.5E-34 3.2E-38 297.1 24.7 225 370-638 5-229 (231)
22 1k1a_A B-cell lymphoma 3-encod 100.0 6.2E-34 2.1E-38 300.7 21.6 230 367-637 5-239 (241)
23 3b7b_A Euchromatic histone-lys 100.0 3E-33 1E-37 294.6 25.9 223 368-635 8-231 (237)
24 3ljn_A Hypothetical protein; a 100.0 1.3E-34 4.3E-39 326.3 16.1 262 332-637 16-312 (364)
25 2dzn_A Probable 26S proteasome 100.0 2.1E-33 7.1E-38 293.9 24.1 221 371-635 2-226 (228)
26 4b93_B Ankyrin repeat domain-c 100.0 3.4E-34 1.2E-38 306.1 16.3 227 14-278 4-240 (269)
27 3aji_A 26S proteasome non-ATPa 100.0 3.2E-33 1.1E-37 293.1 23.4 225 18-280 3-228 (231)
28 3eu9_A Huntingtin-interacting 100.0 8.1E-33 2.8E-37 291.8 26.4 232 14-282 2-235 (240)
29 3kea_A K1L; tropism, ANK repea 100.0 7.8E-34 2.7E-38 307.2 17.8 224 14-252 24-249 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 5.3E-34 1.8E-38 304.7 15.0 215 368-626 8-230 (269)
31 2dzn_A Probable 26S proteasome 100.0 1.6E-32 5.4E-37 287.2 22.9 219 21-278 2-226 (228)
32 1oy3_D Transcription factor in 100.0 1E-32 3.5E-37 299.0 21.6 253 47-302 2-270 (282)
33 2f8y_A Notch homolog 1, transl 100.0 2.5E-32 8.6E-37 284.5 22.0 215 381-639 1-216 (223)
34 2f8y_A Notch homolog 1, transl 100.0 5.5E-32 1.9E-36 282.0 23.7 214 31-281 1-215 (223)
35 3kea_A K1L; tropism, ANK repea 100.0 1.3E-32 4.4E-37 297.6 19.5 238 30-284 8-248 (285)
36 3eu9_A Huntingtin-interacting 100.0 1.8E-31 6.3E-36 281.4 25.6 226 369-639 7-235 (240)
37 1s70_B 130 kDa myosin-binding 100.0 4E-32 1.4E-36 297.0 16.9 274 27-312 4-286 (299)
38 1s70_B 130 kDa myosin-binding 100.0 3.4E-32 1.2E-36 297.6 16.1 249 18-279 37-286 (299)
39 2rfa_A Transient receptor pote 100.0 3.6E-31 1.2E-35 277.7 22.4 193 20-213 2-222 (232)
40 3hra_A Ankyrin repeat family p 100.0 1.8E-30 6E-35 265.7 24.2 193 18-211 2-201 (201)
41 1ikn_D Protein (I-kappa-B-alph 100.0 4.7E-32 1.6E-36 285.1 11.7 199 15-214 2-210 (236)
42 4gpm_A Engineered protein OR26 100.0 2.4E-30 8.3E-35 254.3 20.5 157 23-180 6-162 (169)
43 1sw6_A Regulatory protein SWI6 100.0 1.9E-32 6.6E-37 302.4 4.4 265 19-301 21-327 (327)
44 1ikn_D Protein (I-kappa-B-alph 100.0 4.4E-31 1.5E-35 277.7 11.0 217 368-622 5-227 (236)
45 3hra_A Ankyrin repeat family p 100.0 4.2E-29 1.4E-33 255.4 24.6 192 403-637 3-201 (201)
46 2rfa_A Transient receptor pote 100.0 1.1E-29 3.6E-34 266.4 20.6 209 371-610 3-226 (232)
47 1sw6_A Regulatory protein SWI6 100.0 2.9E-31 9.7E-36 293.1 8.9 238 14-268 45-327 (327)
48 2etb_A Transient receptor pote 100.0 3.8E-30 1.3E-34 274.2 14.2 193 20-213 1-246 (256)
49 4gpm_A Engineered protein OR26 100.0 1.3E-28 4.5E-33 242.0 19.9 159 407-609 6-164 (169)
50 2etb_A Transient receptor pote 100.0 2.6E-29 9.1E-34 267.7 14.5 217 404-639 1-246 (256)
51 2pnn_A Transient receptor pote 100.0 2.2E-29 7.7E-34 271.0 13.8 165 14-179 6-218 (273)
52 2rfm_A Putative ankyrin repeat 100.0 1.1E-28 3.9E-33 250.1 17.3 167 10-177 24-190 (192)
53 2pnn_A Transient receptor pote 100.0 3E-28 1E-32 262.2 17.0 203 44-248 3-257 (273)
54 3jxi_A Vanilloid receptor-rela 100.0 1.8E-28 6E-33 262.0 13.7 195 18-213 2-250 (260)
55 3v31_A Ankyrin repeat family A 100.0 1.5E-27 5E-32 235.9 17.7 159 20-179 2-160 (167)
56 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.9E-27 9.9E-32 234.1 19.3 160 17-177 10-169 (169)
57 3jxi_A Vanilloid receptor-rela 99.9 3E-28 1E-32 260.2 12.0 221 402-640 2-251 (260)
58 3v30_A DNA-binding protein rfx 99.9 1.9E-27 6.5E-32 236.3 16.9 169 21-191 2-171 (172)
59 1ihb_A P18-INK4C(INK6), cyclin 99.9 4E-27 1.4E-31 231.5 16.8 159 19-179 3-162 (162)
60 4hbd_A KN motif and ankyrin re 99.9 1.3E-27 4.4E-32 256.9 13.5 190 20-211 75-273 (276)
61 1awc_B Protein (GA binding pro 99.9 1.4E-26 4.7E-31 225.1 18.3 151 21-173 2-152 (153)
62 4hbd_A KN motif and ankyrin re 99.9 9.3E-27 3.2E-31 250.2 17.1 167 11-178 101-274 (276)
63 2aja_A Ankyrin repeat family p 99.9 2.2E-29 7.6E-34 279.8 -5.9 264 23-311 67-370 (376)
64 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-26 5.3E-31 228.0 14.4 160 17-178 4-164 (165)
65 3f6q_A Integrin-linked protein 99.9 4.9E-26 1.7E-30 227.7 16.6 162 18-180 2-164 (179)
66 2rfm_A Putative ankyrin repeat 99.9 6.4E-26 2.2E-30 229.8 16.6 163 47-211 28-190 (192)
67 3v30_A DNA-binding protein rfx 99.9 7E-26 2.4E-30 225.0 16.5 168 373-617 4-171 (172)
68 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-25 3.9E-30 219.5 17.3 153 21-176 2-155 (156)
69 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-25 4.6E-30 220.5 17.7 158 53-212 4-161 (162)
70 2vge_A RELA-associated inhibit 99.9 1.1E-28 3.8E-33 256.7 -6.5 191 14-208 14-208 (229)
71 2aja_A Ankyrin repeat family p 99.9 3.9E-28 1.3E-32 269.8 -2.6 286 30-356 43-369 (376)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.1E-25 1.8E-29 217.9 19.5 158 51-210 11-168 (169)
73 3v31_A Ankyrin repeat family A 99.9 5.4E-25 1.9E-29 217.4 18.6 158 53-212 2-159 (167)
74 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.6E-26 1.2E-30 240.2 8.2 180 19-200 3-193 (239)
75 1awc_B Protein (GA binding pro 99.9 1.9E-24 6.6E-29 209.9 18.0 151 54-207 2-152 (153)
76 2vge_A RELA-associated inhibit 99.9 1.7E-27 5.8E-32 247.7 -4.5 198 388-632 2-206 (229)
77 3f6q_A Integrin-linked protein 99.9 1.6E-24 5.5E-29 216.6 16.3 166 405-614 5-171 (179)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 7.4E-25 2.5E-29 213.5 11.2 147 13-161 4-151 (156)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.8E-24 2.3E-28 206.8 17.4 153 54-210 2-155 (156)
80 1d9s_A Cyclin-dependent kinase 99.9 1.3E-24 4.5E-29 206.2 11.5 132 13-146 4-136 (136)
81 3twr_A Tankyrase-2; ankyrin re 99.9 5.1E-24 1.7E-28 209.9 14.9 159 50-211 4-163 (165)
82 3t8k_A Uncharacterized protein 99.9 3.8E-24 1.3E-28 213.9 9.3 154 21-177 6-177 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 2.2E-23 7.4E-28 197.8 13.0 134 44-179 2-136 (136)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.6E-24 1.2E-28 224.9 7.4 160 51-213 2-164 (239)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-22 3.7E-27 190.2 15.6 126 20-146 1-126 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-22 4.4E-27 192.5 14.5 127 17-144 10-136 (136)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 1.6E-22 5.4E-27 196.9 11.6 143 48-193 6-149 (156)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-21 3.5E-26 186.2 14.2 127 50-177 10-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.6E-21 1.2E-25 179.8 15.9 126 53-179 1-126 (126)
90 3t8k_A Uncharacterized protein 99.9 6.3E-22 2.2E-26 197.8 10.3 154 371-569 6-176 (186)
91 3c5r_A BARD-1, BRCA1-associate 99.9 4.9E-22 1.7E-26 188.8 8.4 125 17-142 6-130 (137)
92 3deo_A Signal recognition part 99.9 9E-22 3.1E-26 197.2 10.6 140 18-176 41-181 (183)
93 3deo_A Signal recognition part 99.9 1.2E-22 4.2E-27 203.5 4.0 162 28-209 7-180 (183)
94 3c5r_A BARD-1, BRCA1-associate 99.9 6.4E-22 2.2E-26 187.9 8.8 133 44-178 1-133 (137)
95 3ui2_A Signal recognition part 99.9 8.4E-23 2.9E-27 214.9 2.1 168 19-209 13-181 (244)
96 3ui2_A Signal recognition part 99.8 1.4E-21 4.6E-26 205.6 11.0 141 18-177 42-183 (244)
97 3ehr_A Osteoclast-stimulating 99.8 7.4E-22 2.5E-26 204.9 8.5 141 13-154 65-206 (222)
98 3aaa_C Myotrophin, protein V-1 99.8 4.4E-21 1.5E-25 178.3 10.7 111 18-129 4-114 (123)
99 2b0o_E UPLC1; arfgap, structur 99.8 7E-21 2.4E-25 206.1 12.5 139 54-200 151-298 (301)
100 3aaa_C Myotrophin, protein V-1 99.8 2.2E-20 7.6E-25 173.5 10.8 115 51-166 4-118 (123)
101 3ehr_A Osteoclast-stimulating 99.8 3.2E-20 1.1E-24 192.5 9.0 163 17-179 21-198 (222)
102 2b0o_E UPLC1; arfgap, structur 99.8 1.1E-19 3.8E-24 196.7 12.0 140 87-237 151-299 (301)
103 3lvq_E ARF-GAP with SH3 domain 99.8 4.7E-19 1.6E-23 206.8 14.6 126 23-149 134-268 (497)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.6E-19 2.6E-23 153.9 12.2 90 20-109 1-90 (93)
105 3jue_A Arfgap with coiled-coil 99.8 6.3E-19 2.1E-23 194.8 13.2 123 21-144 199-324 (368)
106 1dcq_A PYK2-associated protein 99.8 8E-18 2.7E-22 179.9 20.0 162 17-179 62-263 (278)
107 1dcq_A PYK2-associated protein 99.8 2.3E-18 7.9E-23 184.1 14.6 125 22-147 131-264 (278)
108 2l6b_A NR1C; ankyrin, consensu 99.8 1.2E-18 4.1E-23 159.6 9.8 108 16-124 4-111 (115)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.7E-18 1.3E-22 149.5 12.2 93 53-146 1-93 (93)
110 3jue_A Arfgap with coiled-coil 99.7 4.6E-18 1.6E-22 187.9 13.8 128 51-179 196-326 (368)
111 3lvq_E ARF-GAP with SH3 domain 99.7 1.3E-17 4.3E-22 194.6 15.8 135 54-196 132-275 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.7 4.5E-18 1.5E-22 155.7 8.0 108 49-157 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 7E-17 2.4E-21 146.2 10.6 97 10-106 13-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 4.7E-15 1.6E-19 134.1 10.2 91 49-140 19-109 (110)
115 3rvy_A ION transport protein; 65.4 1.8 6.2E-05 45.1 1.2 47 796-843 62-108 (285)
116 4dxw_A Navrh, ION transport pr 49.4 7.2 0.00025 38.9 2.3 48 796-843 43-91 (229)
117 2r9r_B Paddle chimera voltage 34.6 14 0.00049 41.8 2.0 50 797-846 241-291 (514)
118 1ors_C Potassium channel; volt 30.8 6.1 0.00021 35.4 -1.5 42 802-845 44-86 (132)
119 4g26_A Pentatricopeptide repea 22.5 81 0.0028 35.5 5.4 78 25-107 33-128 (501)
120 3r46_A Coiled coil helix L24D; 20.1 1.1E+02 0.0037 18.7 2.9 22 912-933 3-24 (35)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-56 Score=515.83 Aligned_cols=395 Identities=33% Similarity=0.479 Sum_probs=332.1
Q ss_pred hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy14874 13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALH 92 (1015)
Q Consensus 13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~ 92 (1015)
.+|..+..|+||||.||..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHH
Q psy14874 93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172 (1015)
Q Consensus 93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~ 172 (1015)
+|+..|+.+++++|++ .+++++..+..|.||||+|+..|+.+++++|++.|++.+..+..|.||||+|+..|+.+++++
T Consensus 86 ~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 86 CAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp HHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999995 578889999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252 (1015)
Q Consensus 173 Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 252 (1015)
|++++.+ .+..+..|.||||+|+..|+.+++++|++.+.... ..+..+.||||.|+..|+.+++++|+++|++++.
T Consensus 165 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 240 (437)
T 1n11_A 165 LLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH---SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA 240 (437)
T ss_dssp HHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9998876 56677778888888888888887777777655432 2233566777777777777777777777777777
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccC
Q psy14874 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELG 332 (1015)
Q Consensus 253 ~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 332 (1015)
.+..|.|||++|+..|+.+++++|++.+++... .
T Consensus 241 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----------------------------------------------~ 274 (437)
T 1n11_A 241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL----------------------------------------------G 274 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC----------------------------------------------C
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC----------------------------------------------C
Confidence 777777777777777777777776665543222 2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHH
Q psy14874 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 412 (1015)
Q Consensus 333 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A 412 (1015)
+..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|
T Consensus 275 ~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 275 NKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDAT-TRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQA 351 (437)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCC-CSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCC-CCCCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHH
Confidence 34577888888888888888888864 7777754 56789999999999999999999999988 678899999999999
Q ss_pred HHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcC
Q psy14874 413 ATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461 (1015)
Q Consensus 413 ~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 461 (1015)
+..|+.+++++|+++|++++.+|..|.||+++|++.|+.+++++|....
T Consensus 352 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 352 AQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999987654
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.2e-56 Score=515.57 Aligned_cols=397 Identities=32% Similarity=0.455 Sum_probs=308.9
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCC
Q psy14874 42 NNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 121 (1015)
Q Consensus 42 ~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g 121 (1015)
+.|++++..+.+|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|
T Consensus 2 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g 80 (437)
T 1n11_A 2 SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVNAKAKDD 80 (437)
T ss_dssp -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTS
T ss_pred CCCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCC
Confidence 3578899899999999999999999999999999999999999999999999999999999999995 578889999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCH
Q psy14874 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV 201 (1015)
Q Consensus 122 ~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~ 201 (1015)
.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+.+. ...+.
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~--------------- 144 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTK--------------- 144 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT---------------
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999876652 22233
Q ss_pred HHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Q psy14874 202 GVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281 (1015)
Q Consensus 202 ~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~ 281 (1015)
.|.||||.|+..|+.+++++|+++|++++..+..|.|||+.|+..++.+++++|++.+.
T Consensus 145 ---------------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 203 (437)
T 1n11_A 145 ---------------------KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203 (437)
T ss_dssp ---------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTC
T ss_pred ---------------------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 34566666777777777777777777777777777777777777777777777776654
Q ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCC
Q psy14874 282 LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGV 361 (1015)
Q Consensus 282 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~ 361 (1015)
.....+ ..|.||||+|+..|+.+++++|++ .|.
T Consensus 204 ~~~~~~----------------------------------------------~~g~t~L~~A~~~~~~~~~~~Ll~-~g~ 236 (437)
T 1n11_A 204 SPHSPA----------------------------------------------WNGYTPLHIAAKQNQVEVARSLLQ-YGG 236 (437)
T ss_dssp CSCCCC----------------------------------------------TTCCCHHHHHHHTTCHHHHHHHHH-TTC
T ss_pred CCCCcC----------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHH-cCC
Confidence 332222 235556666666666666666664 355
Q ss_pred CcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCH
Q psy14874 362 QVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS 441 (1015)
Q Consensus 362 ~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~ 441 (1015)
+++.. +..|.||||+|+..|+.+++++|++++++ .+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 237 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 314 (437)
T 1n11_A 237 SANAE-SVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 314 (437)
T ss_dssp CTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCH
T ss_pred CCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCH
Confidence 55533 34577777777777777777777777776 46677888888888888888888888888888888888888888
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521 (1015)
Q Consensus 442 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 521 (1015)
||+|+..|+.+++++|+++|++++.. |..|.||||+|+..|+.++|++|+++|+
T Consensus 315 L~~A~~~g~~~~v~~Ll~~gad~n~~--------------------------~~~g~t~L~~A~~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 315 LHVASHYGNIKLVKFLLQHQADVNAK--------------------------TKLGYSPLHQAAQQGHTDIVTLLLKNGA 368 (437)
T ss_dssp HHHHHHSSCSHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHcCcHHHHHHHHhcCCCCCCC--------------------------CCCCCCHHHHHHHCChHHHHHHHHHCcC
Confidence 88888888888888888888887754 6778899999999999999999999888
Q ss_pred CCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHh
Q psy14874 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 568 (1015)
Q Consensus 522 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 568 (1015)
++ +.++..|.|||++|+..|+.+++++|..
T Consensus 369 ~~-----------------~~~~~~g~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 369 SP-----------------NEVSSDGTTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp CS-----------------CCCCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CC-----------------CCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 88 4456678888888888888877777754
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.5e-39 Score=362.53 Aligned_cols=262 Identities=21% Similarity=0.243 Sum_probs=200.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQ-EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
+..|.||||.||+.|++++|++|+++|+++|..+. .|+||||+|+..|+.++|++|+++|++++.++..+.++++.++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 34578999999999999999999999999998875 48999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------CCCcHHHHHHHcCC
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD----------QGQKPIHVAAQNNF 166 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~----------~~~t~L~~A~~~g~ 166 (1015)
.++.+++..++ ..+.+++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 102 ~~~~~~~~~~~-~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 102 AGSVKLLKLFL-SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HTCHHHHHHHH-TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred cccchhhHHhh-hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 99999999998 56788999999999999999999999999999999999876543 45666666666666
Q ss_pred hHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy14874 167 PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246 (1015)
Q Consensus 167 ~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 246 (1015)
.+++++|+++....++..+..|.|+++.++..+.. .+...++++|+++
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~--------------------------------~~~~~i~~lLl~~ 228 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDD--------------------------------SDVEAITHLLLDH 228 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT--------------------------------TTHHHHHHHHHHT
T ss_pred HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc--------------------------------ccHHHHHHHHHHC
Confidence 66666666543333555555566655554432210 0113567778888
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874 247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSS-KALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312 (1015)
Q Consensus 247 ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 312 (1015)
|++++.++..|.||||+|+..|+.++++.|++. +.+....+..|.||||+|+..|+.+++++|+++
T Consensus 229 gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 888888888888888888888877777777764 334444444444444444444444444444444
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.3e-39 Score=358.00 Aligned_cols=300 Identities=28% Similarity=0.351 Sum_probs=213.2
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcC
Q psy14874 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199 (1015)
Q Consensus 121 g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~-~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 199 (1015)
|.|+|+.|+++|+.++|++|+++|+|+|.++.. |+||||+|+..|+.+++++|++++.+ +...+..+.++++
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~------ 97 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFI------ 97 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHH------
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhH------
Confidence 456677777777777777777777776666543 66666666666666666666666554 2333333333333
Q ss_pred CHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy14874 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSS 279 (1015)
Q Consensus 200 ~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~ 279 (1015)
.++..+...++..+++.+++++..|..|.||++.|+..|+.+++++|++.
T Consensus 98 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ 147 (337)
T 4g8k_A 98 ------------------------------LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 147 (337)
T ss_dssp ------------------------------HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred ------------------------------HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 33333344444444444455555555555555555555555555555555
Q ss_pred CCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhc
Q psy14874 280 KALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSA 359 (1015)
Q Consensus 280 ~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~ 359 (1015)
++........... .......|.||||+|+..|+.++|++|+++.
T Consensus 148 ga~~~~~~~~~~~------------------------------------~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~ 191 (337)
T 4g8k_A 148 GANVNLRRKTKED------------------------------------QERLRKGGATALMDAAEKGHVEVLKILLDEM 191 (337)
T ss_dssp TCCTTCCCCCC-----------------------------------------CTTCSCCHHHHHHHHTCHHHHHHHHHHS
T ss_pred CCCcchhhccccc------------------------------------cccccCCCCcHHHHHHHCCCHHHHHHHHhcc
Confidence 4432221111000 0112346889999999999999999999878
Q ss_pred CCCcccccccCCccHHHHHHhCCC----HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhC-CCCcccC
Q psy14874 360 GVQVDAQTQENGYNPLHLACFGGH----VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEINAT 434 (1015)
Q Consensus 360 g~~~~~~~~~~g~tpL~~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~i~~~ 434 (1015)
|++++.. +..|.|+++.++..+. .+++++|+++|++ ++..+..|.||||+|+..|+.++++.|++. |++++.+
T Consensus 192 gad~n~~-d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~ 269 (337)
T 4g8k_A 192 GADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT 269 (337)
T ss_dssp CCCTTCC-CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCB
T ss_pred CCCcCcc-CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCc
Confidence 9998864 5678899988765433 4688999999998 688899999999999999999999999985 8999999
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHH
Q psy14874 435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514 (1015)
Q Consensus 435 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 514 (1015)
|..|.||||+|++.|+.+++++|+++|++++. .+|||.|+.+|+.++|+
T Consensus 270 d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-------------------------------~~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 270 DSDGKTALLLAVELKLKKIAELLCKRGASTDC-------------------------------GDLVMTARRNYDHSLVK 318 (337)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-------------------------------CCHHHHHHHTTCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------------------------CCHHHHHHHcCCHHHHH
Confidence 99999999999999999999999999998763 37999999999999999
Q ss_pred HHHhcCCCCcch
Q psy14874 515 VLLGQGAEINAT 526 (1015)
Q Consensus 515 ~Ll~~ga~~~~~ 526 (1015)
+|+++||++|..
T Consensus 319 ~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 319 VLLSHGAKEDFH 330 (337)
T ss_dssp HHHHTTCCC---
T ss_pred HHHHCcCCCCCC
Confidence 999999999764
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.2e-38 Score=354.15 Aligned_cols=283 Identities=27% Similarity=0.357 Sum_probs=247.1
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 15 NKQTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
+..+..|.|+||.||+.|+.+.|+.|+.. +.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 44567788999999999999999998886 78999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L 173 (1015)
|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|+++|+..+..+.+++.
T Consensus 98 A~~~g~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 98 ACSYGHYEVTELLLK-HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence 999999999999995 5888999999999999999999999999999999999999999999999999998888888876
Q ss_pred hhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC
Q psy14874 174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEG---GHANVVRVLVKAGASC 250 (1015)
Q Consensus 174 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~ga~~ 250 (1015)
.. .+++..++..++.+.++.++..... ....+..+.||||.|+.. +..+++++|+++|+++
T Consensus 177 ~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 177 FK-------------GHSLLQAAREADLAKVKKTLALEII---NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HH-------------HHHHHHHHHTTCHHHHHHHTTTCCT---TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred hc-------------ccHHHHHHHhccHHHHHHHHHhhcc---cccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 54 2467888899999999988875432 233455788999999999 5589999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 251 TDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP 314 (1015)
Q Consensus 251 ~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~ 314 (1015)
+..+..|.||||+|+..|+.+++++|++.+++....+..|.||||+|+..|+.+++++|++++.
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999999999999999999999987766666666666666666666666666666544
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.4e-39 Score=359.35 Aligned_cols=311 Identities=28% Similarity=0.320 Sum_probs=217.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy14874 83 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAA 162 (1015)
Q Consensus 83 ~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~ 162 (1015)
.+..+.|+||.|+..|+.+.++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred eccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 34456677777777777777777776666667777777777777777777777777777777777777777777777777
Q ss_pred HcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy14874 163 QNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242 (1015)
Q Consensus 163 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~ 242 (1015)
..|+.+++++|++++.+ ++..+ ..|.||||+|+..|+.+++++
T Consensus 100 ~~g~~~iv~~Ll~~g~~-~~~~~------------------------------------~~g~t~L~~A~~~~~~~~v~~ 142 (351)
T 3utm_A 100 SYGHYEVTELLLKHGAC-VNAMD------------------------------------LWQFTPLHEAASKNRVEVCSL 142 (351)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCC------------------------------------TTCCCHHHHHHHTTCHHHHHH
T ss_pred HCCCHHHHHHHHHCCCC-CCCCC------------------------------------CCCCCHHHHHHHcCCHHHHHH
Confidence 77777777777776554 22222 234567777777777788888
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q psy14874 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPP 322 (1015)
Q Consensus 243 Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 322 (1015)
|+++|++++..+..|.+|++.|+..+..+.+.+....
T Consensus 143 Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~------------------------------------------- 179 (351)
T 3utm_A 143 LLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG------------------------------------------- 179 (351)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH-------------------------------------------
T ss_pred HHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc-------------------------------------------
Confidence 8888888888888888888888766555555443321
Q ss_pred CCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhC---CCHHHHHHHHHhcchhhc
Q psy14874 323 TGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFG---GHVTVVGLLLSRAADLLQ 399 (1015)
Q Consensus 323 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~---g~~~iv~~Ll~~~~~~~~ 399 (1015)
.++..++..++.+.++.++.....+. ..+..|.||||+|+.. +..+++++|++.+.+ ++
T Consensus 180 ---------------~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~ 241 (351)
T 3utm_A 180 ---------------HSLLQAAREADLAKVKKTLALEIINF--KQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VN 241 (351)
T ss_dssp ---------------HHHHHHHHTTCHHHHHHHTTTCCTTC--CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TT
T ss_pred ---------------cHHHHHHHhccHHHHHHHHHhhcccc--cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cC
Confidence 13334444444444444443322221 2344566777777776 446777777777777 56
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHH
Q psy14874 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVV 479 (1015)
Q Consensus 400 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~ 479 (1015)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~------------ 309 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII------------ 309 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC------------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc------------
Confidence 67778888888888888888888888888888888888888888888888888888888888877654
Q ss_pred HHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 480 GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521 (1015)
Q Consensus 480 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 521 (1015)
|..|.||+++| ..+++++|.+.+.
T Consensus 310 --------------~~~g~tal~~a----~~~~~~~l~~~~~ 333 (351)
T 3utm_A 310 --------------SLQGFTAAQMG----NEAVQQILSESTP 333 (351)
T ss_dssp --------------CTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred --------------CCCCCChhhhh----hHHHHHHHHhccc
Confidence 67788888886 5677777777653
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-38 Score=339.70 Aligned_cols=265 Identities=23% Similarity=0.252 Sum_probs=239.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVF-DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN 97 (1015)
Q Consensus 19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~ 97 (1015)
.+|.||||.|++.|+.++|++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 35889999999999999999999999999987 88899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHHcCCh
Q psy14874 98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT----------DDQGQKPIHVAAQNNFP 167 (1015)
Q Consensus 98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~----------d~~~~t~L~~A~~~g~~ 167 (1015)
|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.
T Consensus 83 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 83 GSVKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp TCHHHHHHHHH-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CCHHHHHHHHH-cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 99999999995 67889999999999999999999999999999999999987 77899999999999999
Q ss_pred HHHHHHhhcCCCCcccCCCCCchHHHHHHHcCC----HHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy14874 168 EVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS----VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243 (1015)
Q Consensus 168 ~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~L 243 (1015)
+++++|++..+..++..+..|.||||+|+..++ .+++++|++.+.+.. ..+..|.||||+|++.|+.+++++|
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999998555578888999999999999998 889999998766533 3345688999999999999999999
Q ss_pred HH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccccc
Q psy14874 244 VK-AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK 287 (1015)
Q Consensus 244 l~-~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~ 287 (1015)
++ .|++++..|..|.|||++|++.++.+++++|+++|++....+
T Consensus 239 l~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 98 899999999999999999999999999999999888665543
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6e-37 Score=332.76 Aligned_cols=270 Identities=29% Similarity=0.441 Sum_probs=246.2
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHH
Q psy14874 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 414 (1015)
Q Consensus 335 ~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~ 414 (1015)
.|.++|+.|+..|+.+++++|++. |.+++...+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence 467999999999999999999975 8888877678899999999999999999999999998 57788999999999999
Q ss_pred cCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcC
Q psy14874 415 HGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD 494 (1015)
Q Consensus 415 ~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 494 (1015)
.|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..... .......+
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------------~~~~~~~~ 145 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT----------------KEDQERLR 145 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC----------------CHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccccccc----------------HHHHHhhc
Confidence 99999999999999999999999999999999999999999999999998765321 11223447
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhc-CCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCc----HHHHHHHHhc
Q psy14874 495 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY----ADLCRFLVHD 569 (1015)
Q Consensus 495 ~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ 569 (1015)
..|.||||.|+..|+.+++++|+++ |+++ +..+..|.||||+|+..++ .+++++|++.
T Consensus 146 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-----------------~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 146 KGGATALMDAAEKGHVEVLKILLDEMGADV-----------------NACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp CCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-----------------TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-----------------CccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 8899999999999999999999997 8888 5567789999999999999 9999999976
Q ss_pred CCccccccccCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874 570 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 640 (1015)
Q Consensus 570 ~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~ 640 (1015)
+. +++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++.+++++|++++.+.
T Consensus 209 g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 209 GA-DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp TC-CSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred CC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 54 568888999999999999999999999999 89999999999999999999999999999999988654
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-38 Score=355.21 Aligned_cols=266 Identities=25% Similarity=0.351 Sum_probs=226.5
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHH--------HhcchhhcccCCCC
Q psy14874 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL--------SRAADLLQSADKNG 405 (1015)
Q Consensus 334 ~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll--------~~~~~~~~~~d~~g 405 (1015)
..|.|+||.|+..+. +++++|+. .+++......|.||||+|+..|+.+++++|+ +.|++ ++..|..|
T Consensus 92 ~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g 166 (373)
T 2fo1_E 92 PESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDE 166 (373)
T ss_dssp --CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTS
T ss_pred CCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCC
Confidence 356677777776443 55555542 3445444456777777777777776666655 77877 67889999
Q ss_pred CcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcC---CCCcccccccccCchHHHHHH
Q psy14874 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG---EKVDVTTNNLACGHVTVVGLL 482 (1015)
Q Consensus 406 ~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~~~~~~~~~~~~l 482 (1015)
.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++ ++++.
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~---------------- 230 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE---------------- 230 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC----------------
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh----------------
Confidence 99999999999999999999999999999999999999999999999999999987 45543
Q ss_pred HHhhhhhhhhcCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCc
Q psy14874 483 LSRAADLLQSADKNGKTCLHIAATHG---HLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 559 (1015)
Q Consensus 483 l~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~ 559 (1015)
.+..|.||||+|+..+ +.+++++|+++|++++..+. ...+.++..|.||||+|+..|+
T Consensus 231 ----------~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~---------~~~~~~d~~g~t~Lh~A~~~g~ 291 (373)
T 2fo1_E 231 ----------LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA---------ARKDSEKYKGRTALHYAAQVSN 291 (373)
T ss_dssp ----------CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG---------GGTSSSSCCCCCTHHHHHSSCC
T ss_pred ----------cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc---------cccCcccccCCCHHHHHHHhCC
Confidence 3789999999999998 89999999999999976432 1235577889999999999999
Q ss_pred HHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874 560 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 560 ~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 639 (1015)
.++|++|++.++.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+.+++.+++++|++++++
T Consensus 292 ~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 292 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999988754
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=327.16 Aligned_cols=255 Identities=18% Similarity=0.184 Sum_probs=209.3
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCC-----------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNH-----------ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR 85 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-----------~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~ 85 (1015)
-...|.|+||+|+..|+.+.+..++..+ -.++..|.+|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~ 90 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA 90 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 3578999999999999988777765542 23566789999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874 86 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 165 (1015)
Q Consensus 86 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g 165 (1015)
.|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence 99999999999999999999995 588999999999999999999999999999999999998654 5999999999999
Q ss_pred ChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874 166 FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245 (1015)
Q Consensus 166 ~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 245 (1015)
+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.+.. .+..|.||||+|+..|+.+++++|++
T Consensus 169 ~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 169 HVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVN----QGKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp CHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT----CCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC----CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999887 67889999999999999999999999999877644 24578899999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK 280 (1015)
Q Consensus 246 ~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~ 280 (1015)
+|++++.+|.+|.|||++|+ ++.+++++|+++.
T Consensus 244 ~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 244 FGADTQAKNAEGKRPVELVP--PESPLAQLFLERE 276 (285)
T ss_dssp TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence 99999999999999999998 4568999999873
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=323.96 Aligned_cols=258 Identities=25% Similarity=0.328 Sum_probs=207.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhhcCC---------CcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCC
Q psy14874 333 SESGMTPLHLAAYSGNENVVRLLLNSAGV---------QVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADK 403 (1015)
Q Consensus 333 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~---------~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~ 403 (1015)
...|.|++|+|+..|+.+.+..++..... ......+..|.||||+|+..|+.+++++|++.+.+ ++..|.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCC
Confidence 35689999999999998777765543111 11123467799999999999999999999999988 688899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHH
Q psy14874 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL 483 (1015)
Q Consensus 404 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll 483 (1015)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---------------- 154 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE---------------- 154 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS----------------
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC----------------
Confidence 9999999999999999999999999999999999999999999999999999999999987643
Q ss_pred HhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHH
Q psy14874 484 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC 563 (1015)
Q Consensus 484 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 563 (1015)
..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.++|
T Consensus 155 -----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v 206 (285)
T 3d9h_A 155 -----------SDLASPIHEAARRGHVECVNSLIAYGGNI-----------------DHKISHLGTPLYLACENQQRACV 206 (285)
T ss_dssp -----------CTTSCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCBTTTBCHHHHHHHTTCHHHH
T ss_pred -----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----------------CCcCCCCCCHHHHHHHcCcHHHH
Confidence 55999999999999999999999999988 55677899999999999999999
Q ss_pred HHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874 564 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 564 ~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 639 (1015)
++|++.+... + .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+ ++.+++++|+++.+.
T Consensus 207 ~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 207 KKLLESGADV-N-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGA 278 (285)
T ss_dssp HHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC--
T ss_pred HHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhcc
Confidence 9999886554 4 3788999999999999999999999999999999999999999999 457999999998443
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.5e-36 Score=320.15 Aligned_cols=232 Identities=26% Similarity=0.333 Sum_probs=169.3
Q ss_pred hhccCCCCCCcHHHHHHhcC-------------CHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14874 13 ALNKQTSIGWTPLLIACNRG-------------HMELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHKA 78 (1015)
Q Consensus 13 ~~n~~~~~g~t~L~~A~~~g-------------~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga 78 (1015)
.+|.+|.+|+||||+|+..| +.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 47899999999999999987 89999999999998864 48899999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy14874 79 FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 158 (1015)
Q Consensus 79 ~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L 158 (1015)
+++.++..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+..|+.+++++|++.|++++..|..|.|||
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 99999999999999999999999999999776668899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHH
Q psy14874 159 HVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238 (1015)
Q Consensus 159 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~ 238 (1015)
|+|+..|+.+++++|++++.+ ++..+. .|.||||.|+..|+.+
T Consensus 162 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~------------------------------------~g~tpL~~A~~~~~~~ 204 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKNGAN-KDMQNN------------------------------------REETPLFLAAREGSYE 204 (253)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCT------------------------------------TSCCHHHHHHHHTCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCcCC------------------------------------CCCCHHHHHHHCCCHH
Confidence 999999999999999988766 333333 4556777777777888
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Q psy14874 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281 (1015)
Q Consensus 239 iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~ 281 (1015)
++++|+++|++++..|..|.||+++|+++|+.+++++|.....
T Consensus 205 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 205 TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred HHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 8888888888888888888888888888888888888876643
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.9e-36 Score=318.16 Aligned_cols=250 Identities=21% Similarity=0.309 Sum_probs=209.3
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
+|+||||.||+.|+.++|++|+++|+++|..|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
.+++++|++ .+.+++. +..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+
T Consensus 82 ~~~v~~Ll~-~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 82 WDCVNLLLQ-HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 159 (261)
T ss_dssp HHHHHHHHH-TTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHH-CCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 999999995 5666664 45699999999999999999999999999999999999999999999999999999998776
Q ss_pred CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q psy14874 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT 259 (1015)
Q Consensus 180 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t 259 (1015)
.. .+. .|.||||.|+..|+.+++++|+++|++++.+|..|.|
T Consensus 160 ~~--~~~------------------------------------~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 201 (261)
T 2xai_A 160 VN--QGK------------------------------------GQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKR 201 (261)
T ss_dssp TT--CCB------------------------------------TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CC--CCC------------------------------------CCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 31 122 3456777777777777777788888888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCccc--------cccccCCCHHHHHHHcCCHHHHHHHHh
Q psy14874 260 AVHLAAQNGHNQVLEEMRSSKALNV--------YSKKLGVTALHVAAYFGQADTVRELLS 311 (1015)
Q Consensus 260 ~L~~A~~~~~~~iv~~Ll~~~~~~~--------~~~~~~~t~l~~A~~~~~~~~v~~Ll~ 311 (1015)
|+++|+.++ ++++.|++.+.... ..+..|.|+++.+......+.++.++.
T Consensus 202 pl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 202 PVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp GGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred hhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 888887544 36777777655322 345678888888888777777766654
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.4e-36 Score=340.38 Aligned_cols=262 Identities=20% Similarity=0.238 Sum_probs=220.5
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
.+..|.+|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++. ..|.||||+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~ 90 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHL 90 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999996664 469999999
Q ss_pred HHHcCCHHHHHHHHhcc---Cccccc-----------------cccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCC
Q psy14874 94 AAMNGYADLCRFLVHDH---AAVIDI-----------------LTLRKQTPLHLAAEAG--QLQVCKLLLDLGASIDATD 151 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~---~~~i~~-----------------~~~~g~t~L~~Aa~~g--~~~ivk~Ll~~gad~n~~d 151 (1015)
|+..|+.+++++|++.. +..++. .+..|.||||+|+..| +.+++++|+++|++++..|
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 99999999999999642 444454 7889999999999999 9999999999999999999
Q ss_pred CCCCcHHHHHHHcCChHHHHHHhhcCCCC----cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcH
Q psy14874 152 DQGQKPIHVAAQNNFPEVAQIFLRAHPSL----VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATP 227 (1015)
Q Consensus 152 ~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~ 227 (1015)
..|.||||+|+..|+.+++++|++.+++. ++..+ ..|.||
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~------------------------------------~~g~t~ 214 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN------------------------------------KQGNSH 214 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC------------------------------------TTCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC------------------------------------CCCCcH
Confidence 99999999999999999999999987762 22222 345677
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc------------cccccCCCHHH
Q psy14874 228 LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV------------YSKKLGVTALH 295 (1015)
Q Consensus 228 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~------------~~~~~~~t~l~ 295 (1015)
||+|+..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|++.++... ..+..++++++
T Consensus 215 L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 294 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFV 294 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccch
Confidence 777777777777777778888888888888888888888888888888887765331 24566788999
Q ss_pred HHHHcCCHHHHHHHHhcC
Q psy14874 296 VAAYFGQADTVRELLSHV 313 (1015)
Q Consensus 296 ~A~~~~~~~~v~~Ll~~~ 313 (1015)
.|+..++.+.+..|+...
T Consensus 295 ~aa~~~~~~~v~~ll~~~ 312 (364)
T 3ljn_A 295 PAAADPSKQEVLQLLQEK 312 (364)
T ss_dssp CSSCCHHHHHHHHHHHHH
T ss_pred hhhhccCHHHHHHHHHHH
Confidence 999988888888887653
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.9e-35 Score=307.13 Aligned_cols=227 Identities=25% Similarity=0.360 Sum_probs=203.2
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
+|.+|.+|.||||.||+.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L 173 (1015)
|+..|+.+++++|++.++..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999776688999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy14874 174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE 253 (1015)
Q Consensus 174 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~ 253 (1015)
++.+.+ ++..+. .|.||||.|++.|+.+++++|+++|++++.+
T Consensus 164 l~~g~~-~~~~~~------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 164 LAAKCD-LHAVNI------------------------------------HGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206 (237)
T ss_dssp HTTTCC-TTCCCT------------------------------------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred HHcCCC-CCCcCC------------------------------------CCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence 988765 333333 3456677777777778888888888888888
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHH
Q psy14874 254 NKTGFTAVHLAAQNGHNQVLEEMR 277 (1015)
Q Consensus 254 ~~~~~t~L~~A~~~~~~~iv~~Ll 277 (1015)
|..|.||+++|+.+++.+.+..++
T Consensus 207 d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 207 NKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp CTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 888888888888888875554444
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-36 Score=338.46 Aligned_cols=283 Identities=21% Similarity=0.183 Sum_probs=196.0
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHH
Q psy14874 24 PLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADL 102 (1015)
Q Consensus 24 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~~g~~ei 102 (1015)
++.-|...|+++++++++.. ..|..|.||||+|+..|. +++++|+. .++|..+ ..|.||||+|+..|+.++
T Consensus 69 ~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~ 140 (373)
T 2fo1_E 69 YGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEK 140 (373)
T ss_dssp ------------------------------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSC
T ss_pred cCCCCCcccccccccccccc-----CCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHH
Confidence 33444455555555555443 246677788888887554 67777654 4566666 577888888888888777
Q ss_pred HHHHHh-------ccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874 103 CRFLVH-------DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175 (1015)
Q Consensus 103 v~~Ll~-------~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~ 175 (1015)
+++|+. ..+.++|..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus 141 v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (373)
T 2fo1_E 141 SEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN 220 (373)
T ss_dssp CTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 776653 4577777777888888888888888888888888888888888888888888888888888888877
Q ss_pred cCC--CCcccCCCCCchHHHHHHHcC---CHHHHHHHHhcCCccccc-----ccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874 176 AHP--SLVTATTKDGNTCAHIAAMQG---SVGVIEELMKFDRSGVIS-----ARNRVTEATPLQLAAEGGHANVVRVLVK 245 (1015)
Q Consensus 176 ~~~--~~~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~~~~~~~~-----~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 245 (1015)
.+. ..++..+..|.||||+|+..+ +.+++++|++.+.+.... ...+..|.||||+|+..|+.+++++|++
T Consensus 221 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 300 (373)
T 2fo1_E 221 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300 (373)
T ss_dssp SHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred cCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence 652 235566777888888888777 777888888776554321 1234467788888888888888888887
Q ss_pred cC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 246 AG-ASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP 314 (1015)
Q Consensus 246 ~g-a~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~ 314 (1015)
+| ++++..|..|.||||+|+..|+.+++++|++.|++....+..|.||+++|+..|+.+++++|+++++
T Consensus 301 ~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 301 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred hcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 75 8888888888888888888888888888888888777777888888888888888888888887643
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.9e-35 Score=314.40 Aligned_cols=227 Identities=29% Similarity=0.420 Sum_probs=180.7
Q ss_pred cCCccHHHHHHhCC-------------CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCC
Q psy14874 369 ENGYNPLHLACFGG-------------HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435 (1015)
Q Consensus 369 ~~g~tpL~~A~~~g-------------~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~ 435 (1015)
.+|.||||+|+..| +.+++++|+++|++..+..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 87 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD 87 (253)
T ss_dssp --------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 34555555555544 89999999999999777779999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhCCHHHHHHHHhcCC-CCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHH
Q psy14874 436 KGGARSIHTAARYGHVGIINTLLQKGE-KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514 (1015)
Q Consensus 436 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 514 (1015)
..|.||||+|+..|+.+++++|+++|. +++. .+..|.||||+|+..|+.++++
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------------------------~~~~g~t~L~~A~~~~~~~~v~ 141 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDA--------------------------RMHDGTTPLILAARLAVEGMLE 141 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC--------------------------CCTTCCCHHHHHHHHTCSSHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc--------------------------cCCCCCcHHHHHHHcChHHHHH
Confidence 999999999999999999999999986 5553 3688999999999999999999
Q ss_pred HHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCH
Q psy14874 515 VLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 594 (1015)
Q Consensus 515 ~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~ 594 (1015)
+|+++|+++ +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.
T Consensus 142 ~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~ 203 (253)
T 1yyh_A 142 DLINSHADV-----------------NAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSY 203 (253)
T ss_dssp HHHHTTCCT-----------------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHcCCCC-----------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCH
Confidence 999999998 556778999999999999999999999875 45688899999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874 595 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 595 ~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 639 (1015)
+++++|+++|++++.+|..|+||+++|+++|+.+++++|....+.
T Consensus 204 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 204 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred HHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999876554
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.5e-35 Score=309.47 Aligned_cols=230 Identities=27% Similarity=0.341 Sum_probs=194.7
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLN----NHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT 89 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t 89 (1015)
++.+|.+|+||||+||+.|+.++|++|++ .|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 57899999999999999999999999997 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccC---ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcC
Q psy14874 90 ALHLAAMNGYADLCRFLVHDHA---AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD-DQGQKPIHVAAQNN 165 (1015)
Q Consensus 90 ~L~~A~~~g~~eiv~~Ll~~~~---~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d-~~~~t~L~~A~~~g 165 (1015)
|||+|+..|+.+++++|++... .+++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 9999999999999999997543 2678889999999999999999999999999999999988 78999999999999
Q ss_pred ChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874 166 FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245 (1015)
Q Consensus 166 ~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~ 245 (1015)
+.+++++|++++.+ ++..+. .|.||||+|+..|+.+++++|++
T Consensus 162 ~~~~v~~Ll~~g~~-~~~~~~------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 162 SLSMVQLLLQHGAN-VNAQMY------------------------------------SGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp CHHHHHHHHHTTCC-TTCBCT------------------------------------TSCBHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCC-CCCcCC------------------------------------CCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999988765 333333 34566666677777777778888
Q ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK 280 (1015)
Q Consensus 246 ~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~ 280 (1015)
+|++++.+|..|.||+++|+..++.++++.|.+.+
T Consensus 205 ~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 205 SGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp TTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred cCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 88888888888888888888888888888777654
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.7e-34 Score=313.06 Aligned_cols=252 Identities=22% Similarity=0.230 Sum_probs=180.1
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHAR---VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTA 90 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~ 90 (1015)
+|.+|.+|+||||+||+.|+.++|++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 688999999999999999999999999999988 88899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCcc------------ccccccCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874 91 LHLAAMNGYADLCRFLVHDHAAV------------IDILTLRKQTPLHLAAEAGQ-LQVCKLLLDLGASIDATDDQGQKP 157 (1015)
Q Consensus 91 L~~A~~~g~~eiv~~Ll~~~~~~------------i~~~~~~g~t~L~~Aa~~g~-~~ivk~Ll~~gad~n~~d~~~~t~ 157 (1015)
||+|+..|+.+++++|++..... .+.....+.++++.++..+. ....+.+...+++++..+..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 99999999999999999643221 11222345566666665543 334555566778888888888899
Q ss_pred HHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH
Q psy14874 158 IHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237 (1015)
Q Consensus 158 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~ 237 (1015)
||+|+..|+.+++++|++++.+.....+..|.||||+|+..|+.+++++|++.+.+.. ..+..|.||||+|+..|+.
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~---~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT---ARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHTSSCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc---ccccCCCCHHHHHHHcCCc
Confidence 9999998999999988888877433333458888888888888888888887765532 2344677888888888888
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q psy14874 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNG 268 (1015)
Q Consensus 238 ~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~ 268 (1015)
+++++|+++|++++.++..|.||+++|....
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHHTTCCCCCCC--------------
T ss_pred HHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 8888888888888888888888888776554
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=304.57 Aligned_cols=220 Identities=28% Similarity=0.412 Sum_probs=197.8
Q ss_pred CCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC
Q psy14874 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG 449 (1015)
Q Consensus 370 ~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g 449 (1015)
+|+||||.|+..|+.+++++|+++|.+ ++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 478999999999999999999999887 6788899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhH
Q psy14874 450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV 529 (1015)
Q Consensus 450 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 529 (1015)
+.+++++|+++|++++.. ..|.||||.|+..|+.+++++|+++|+++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~---------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------ 127 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE---------------------------SDLASPIHEAARRGHVECVNSLIAYGGNI------ 127 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS---------------------------CTTCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred CHHHHHHHHHCCCCCCCC---------------------------CCCCCHHHHHHHcCcHHHHHHHHHcCCCC------
Confidence 999999999999987642 56899999999999999999999999988
Q ss_pred HHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874 530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609 (1015)
Q Consensus 530 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~ 609 (1015)
+.++..|.||||+|+..|+.+++++|++.+... + .+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 128 -----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 128 -----------DHKISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp -----------TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred -----------CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 456778999999999999999999999886654 4 377899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHhcCChHHHHHHHHhCC
Q psy14874 610 TDDQGQKPIHVAAQNNFPEVAQIFLRAHP 638 (1015)
Q Consensus 610 ~d~~g~t~l~~A~~~~~~~~~~~ll~~~~ 638 (1015)
+|..|+||+++|+.++ +++++|++.+.
T Consensus 195 ~d~~g~tpl~~A~~~~--~~~~~ll~~~~ 221 (261)
T 2xai_A 195 KNAEGKRPVELVPPES--PLAQLFLEREG 221 (261)
T ss_dssp CCTTSCCGGGGSCTTC--THHHHHHHC-C
T ss_pred cCCCCCChhhhccccc--cHHHHHHhccC
Confidence 9999999999999554 58888888643
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.5e-34 Score=297.13 Aligned_cols=225 Identities=28% Similarity=0.394 Sum_probs=207.5
Q ss_pred CCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC
Q psy14874 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG 449 (1015)
Q Consensus 370 ~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g 449 (1015)
.+.+||+.|+..|+.+.++++++.++...+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence 46789999999999999999999888877888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhH
Q psy14874 450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV 529 (1015)
Q Consensus 450 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 529 (1015)
+.+++++|+++|++++.. +..|.||||.|+..|+.+++++|+++|+++
T Consensus 85 ~~~~v~~Ll~~g~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------ 132 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAV--------------------------NQNGCTPLHYAASKNRHEIAVMLLEGGANP------ 132 (231)
T ss_dssp CHHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred HHHHHHHHHHcCCCCCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------
Confidence 999999999999887754 688999999999999999999999999988
Q ss_pred HHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874 530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609 (1015)
Q Consensus 530 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~ 609 (1015)
+.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 133 -----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 133 -----------DAKDHYDATAMHRAAAKGNLKMVHILLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp -----------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred -----------CCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 456678999999999999999999999764 45688889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHhcCChHHHHHHHHhCC
Q psy14874 610 TDDQGQKPIHVAAQNNFPEVAQIFLRAHP 638 (1015)
Q Consensus 610 ~d~~g~t~l~~A~~~~~~~~~~~ll~~~~ 638 (1015)
+|..|.||+++|+..++.+++++|.+++.
T Consensus 201 ~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 201 ENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 99999999999999999999999987653
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.2e-34 Score=300.69 Aligned_cols=230 Identities=24% Similarity=0.351 Sum_probs=198.9
Q ss_pred cccCCccHHHHHHhCCCHHHHHHHHH----hcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHH
Q psy14874 367 TQENGYNPLHLACFGGHVTVVGLLLS----RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSI 442 (1015)
Q Consensus 367 ~~~~g~tpL~~A~~~g~~~iv~~Ll~----~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L 442 (1015)
.+.+|.||||+|+..|+.+++++|++ .+.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 35678889999999999888888887 4444 677888999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy14874 443 HTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 522 (1015)
Q Consensus 443 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 522 (1015)
|+|+..|+.+++++|++++...... ++..+..|.||||.|+..|+.+++++|+++|++
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~----------------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 141 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLD----------------------LEARNYDGLTALHVAVNTECQETVQLLLERGAD 141 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCC----------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccc----------------------ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999998732211 223478899999999999999999999999998
Q ss_pred CcchhhHHHhhhhccccccccC-CCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHH
Q psy14874 523 INATDKVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 601 (1015)
Q Consensus 523 ~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll 601 (1015)
++. .+ ..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+
T Consensus 142 ~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 142 IDA-----------------VDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLV 203 (241)
T ss_dssp TTC-----------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred ccc-----------------ccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 843 44 67999999999999999999999875 456888999999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhC
Q psy14874 602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637 (1015)
Q Consensus 602 ~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~ 637 (1015)
++|++++.+|..|.||+++|+..++.++++.|.+.+
T Consensus 204 ~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 204 RSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred hcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 999999999999999999999999999999887654
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3e-33 Score=294.56 Aligned_cols=223 Identities=27% Similarity=0.475 Sum_probs=201.6
Q ss_pred ccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHH
Q psy14874 368 QENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAAR 447 (1015)
Q Consensus 368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~ 447 (1015)
+..|.||||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Confidence 46788999999999999999999999888 57788899999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcC-CCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcch
Q psy14874 448 YGHVGIINTLLQKG-EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526 (1015)
Q Consensus 448 ~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 526 (1015)
.|+.+++++|+++| .+++.. +..|.||||.|+..|+.+++++|+++|+++
T Consensus 87 ~~~~~~~~~Ll~~~~~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--- 137 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDVNCQ--------------------------DDGGWTPMIWATEYKHVDLVKLLLSKGSDI--- 137 (237)
T ss_dssp TTCHHHHHHHHTTTCCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---
T ss_pred cCCHHHHHHHHhCCCCCcccC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---
Confidence 99999999999998 565543 678999999999999999999999999988
Q ss_pred hhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy14874 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606 (1015)
Q Consensus 527 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~ 606 (1015)
+.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 138 --------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 138 --------------NIRDNEENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202 (237)
T ss_dssp --------------TCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred --------------CccCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC
Confidence 456778999999999999999999999775 45688889999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874 607 IDATDDQGQKPIHVAAQNNFPEVAQIFLR 635 (1015)
Q Consensus 607 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~ 635 (1015)
++.+|..|+||+++|+.+++.+.+..+.+
T Consensus 203 ~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876655543
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.3e-34 Score=326.34 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=222.0
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHH
Q psy14874 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411 (1015)
Q Consensus 332 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~ 411 (1015)
.+..|.||||+|+..|+.++|++|++. |++++.. +..|.||||+|+..|+.+++++|++++++. .+..|.||||+
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~ 90 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHL 90 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHH
Confidence 456788999999999999999999974 8888864 567899999999999999999999998853 34578999999
Q ss_pred HHHcCCHHHHHHHhhC----CCCccc-----------------CCCCCCCHHHHHHHhC--CHHHHHHHHhcCCCCcccc
Q psy14874 412 AATHGHLQMVEVLLGQ----GAEINA-----------------TDKGGARSIHTAARYG--HVGIINTLLQKGEKVDVTT 468 (1015)
Q Consensus 412 A~~~g~~~iv~~Ll~~----ga~i~~-----------------~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~ 468 (1015)
|+..|+.+++++|+++ |++++. .+..|.||||+|+..| +.+++++|+++|++++..
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~- 169 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK- 169 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC-
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc-
Confidence 9999999999999998 888877 8888999999999999 999999999999888754
Q ss_pred cccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCC
Q psy14874 469 NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548 (1015)
Q Consensus 469 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~ 548 (1015)
|..|.||||+|+..|+.+++++|+++|++... .+++..+..|.
T Consensus 170 -------------------------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~~~~~~g~ 212 (364)
T 3ljn_A 170 -------------------------DKADETPLMRAMEFRNREALDLMMDTVPSKSS------------LRLDYANKQGN 212 (364)
T ss_dssp -------------------------CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS------------CCTTCCCTTCC
T ss_pred -------------------------CCCCCCHHHHHHHcCCHHHHHHHHhccccccc------------ccccccCCCCC
Confidence 67899999999999999999999999888321 11366778899
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------CCCCCCC
Q psy14874 549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA------------TDDQGQK 616 (1015)
Q Consensus 549 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~------------~d~~g~t 616 (1015)
||||+|+..|+.++|++|++.+ .+++..|..|.||||+|+..|+.+++++|+++|++++. .+..++|
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWL 291 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccc
Confidence 9999999999999999999765 45688888999999999999999999999998876532 5677889
Q ss_pred HHHHHHhcCChHHHHHHHHhC
Q psy14874 617 PIHVAAQNNFPEVAQIFLRAH 637 (1015)
Q Consensus 617 ~l~~A~~~~~~~~~~~ll~~~ 637 (1015)
|+++|+..++.+.+..|++.+
T Consensus 292 ~l~~aa~~~~~~~v~~ll~~~ 312 (364)
T 3ljn_A 292 DFVPAAADPSKQEVLQLLQEK 312 (364)
T ss_dssp TTSCSSCCHHHHHHHHHHHHH
T ss_pred cchhhhhccCHHHHHHHHHHH
Confidence 999999888777777776654
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.1e-33 Score=293.87 Aligned_cols=221 Identities=27% Similarity=0.424 Sum_probs=198.9
Q ss_pred CccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCC--CCccc-CCCCCCCHHHHHHH
Q psy14874 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG--AEINA-TDKGGARSIHTAAR 447 (1015)
Q Consensus 371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g--a~i~~-~~~~g~t~L~~A~~ 447 (1015)
|.||||.|+..|+.+++++|++.+++..+..+..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 6799999999999999999999999877778999999999999999999999999999 66666 78899999999999
Q ss_pred hCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh
Q psy14874 448 YGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527 (1015)
Q Consensus 448 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 527 (1015)
.|+.+++++|+++|.+.+. +..+..|.||||.|+..|+.+++++|+++|+++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~------------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---- 133 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDL------------------------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASV---- 133 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCT------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS----
T ss_pred cCCHHHHHHHHhCCCCccc------------------------ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc----
Confidence 9999999999999843332 133688999999999999999999999999998
Q ss_pred hHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHH-HcCCC
Q psy14874 528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL-DLGAS 606 (1015)
Q Consensus 528 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll-~~ga~ 606 (1015)
+.++..|.||||+|+..|+.+++++|++.+..+++..|..|+||||+|+..|+.+++++|+ +.|++
T Consensus 134 -------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 134 -------------RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp -------------CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred -------------cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 5567789999999999999999999999887888999999999999999999999999999 89999
Q ss_pred CCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874 607 IDATDDQGQKPIHVAAQNNFPEVAQIFLR 635 (1015)
Q Consensus 607 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~ 635 (1015)
++.+|..|+||+++|+.. +++++|++
T Consensus 201 ~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 201 YDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp SCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred CCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 999999999999999754 56666654
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-34 Score=306.14 Aligned_cols=227 Identities=30% Similarity=0.333 Sum_probs=166.4
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC--------CCCCCCCCCcHHHHHHHcCCH-HHHHHHHhCCCCCCCCC
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHAR--------VDVFDQEGRSALHLAAEHGYL-KVCDALLTHKAFINSKS 84 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~--------~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~in~~~ 84 (1015)
-.++|..+.+||+.||+.|+.++|++|++.|++ ++..+..|.|||+.|+..++. .++++|++.|+++|.+|
T Consensus 4 e~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d 83 (269)
T 4b93_B 4 ETKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS 83 (269)
T ss_dssp ---CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCC
T ss_pred ccccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC
Confidence 356788899999999999999999999999875 456678899999999988775 58999999999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 85 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 164 (1015)
Q Consensus 85 ~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~ 164 (1015)
.+|.||||+|+..|+.++|++|++ .+++++..+..|.||++.|+..++.+++++|++.|+++|.+|..|.||||+|+..
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 999999999999999999999994 6788899999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874 165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV 244 (1015)
Q Consensus 165 g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll 244 (1015)
|+.+++++|++.+.+ ++..+. .|.||||+|+..|+.+++++|+
T Consensus 163 g~~~~v~~Ll~~gad-vn~~~~------------------------------------~g~t~Lh~A~~~g~~~~v~~Ll 205 (269)
T 4b93_B 163 GHHELVALLLQHGAS-INASNN------------------------------------KGNTALHEAVIEKHVFVVELLL 205 (269)
T ss_dssp TCGGGHHHHHHTTCC-TTCBCT------------------------------------TSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCC-CCcccc------------------------------------CCCcHHHHHHHcCCHHHHHHHH
Confidence 999999999998776 344443 3456666677777778888888
Q ss_pred HcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHh
Q psy14874 245 KAGASCTDENKTGFTAVHLAAQNGH-NQVLEEMRS 278 (1015)
Q Consensus 245 ~~ga~~~~~~~~~~t~L~~A~~~~~-~~iv~~Ll~ 278 (1015)
++|++++.+|..|.|||++|+++++ .++++.+.+
T Consensus 206 ~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~ 240 (269)
T 4b93_B 206 LHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPS 240 (269)
T ss_dssp HTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---
T ss_pred HCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHH
Confidence 8888888888888888888877664 233333333
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.2e-33 Score=293.13 Aligned_cols=225 Identities=25% Similarity=0.317 Sum_probs=190.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
+..+.||||.|++.|+.+.+++|++.+. .++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 4568899999999999999999999765 467779999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.
T Consensus 83 ~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 161 (231)
T 3aji_A 83 AGXDEIVKALLV-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161 (231)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cCHHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 999999999995 5788899999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy14874 177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT 256 (1015)
Q Consensus 177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 256 (1015)
+.+ ++..+..| .||||+|+..|+.+++++|+++|++++.+|..
T Consensus 162 g~~-~~~~~~~g------------------------------------~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 204 (231)
T 3aji_A 162 KAS-TNIQDTEG------------------------------------NTPLHLACDEERVEEAKFLVTQGASIYIENKE 204 (231)
T ss_dssp TCC-SCCCCTTS------------------------------------CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCC-ccccCCCC------------------------------------CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 765 34444444 45555555666666666666677777767777
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874 257 GFTAVHLAAQNGHNQVLEEMRSSK 280 (1015)
Q Consensus 257 ~~t~L~~A~~~~~~~iv~~Ll~~~ 280 (1015)
|.||+++|+..++.+++++|.+.+
T Consensus 205 g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 205 EKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp SCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHhhHHHHHHHHHcccc
Confidence 777777777666677777666654
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.1e-33 Score=291.80 Aligned_cols=232 Identities=21% Similarity=0.294 Sum_probs=195.6
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALH 92 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~ 92 (1015)
++..|..|.||||.|++.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 57789999999999999999999999999999999999999999999999999999999999999987654 44999999
Q ss_pred HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-hHHHH
Q psy14874 93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF-PEVAQ 171 (1015)
Q Consensus 93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~-~~iv~ 171 (1015)
+|+..|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++ .++++
T Consensus 82 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMK-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred HHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 9999999999999994 578889899999999999999999999999999999999999999999999996666 78888
Q ss_pred HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874 172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT 251 (1015)
Q Consensus 172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 251 (1015)
+|++.+.+. +..+. ..|.||||.|+..|+.+++++|+++|++++
T Consensus 161 ~L~~~~~~~-~~~~~-----------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 161 LLLTFNVSV-NLGDK-----------------------------------YHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp HHHHTTCCT-TCCCT-----------------------------------TTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHhcCCCc-chhhc-----------------------------------cCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 888877663 22222 134466666666677777777777777777
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Q psy14874 252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKAL 282 (1015)
Q Consensus 252 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~ 282 (1015)
..+..|.||+++|++.++.+++++|++.++.
T Consensus 205 ~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 205 AQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 7777777777777777777777777776653
No 29
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.8e-34 Score=307.19 Aligned_cols=224 Identities=17% Similarity=0.123 Sum_probs=137.7
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
+|.+|..|+||||+|++.|+.++|++|+++|++++.. +|+||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 3666666666666666666666666666666666654 36666666666666666666666666666666666666666
Q ss_pred HHHcCCHHHHHHHHhccCccccccccCC-CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHH
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILTLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g-~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~ 172 (1015)
|+..|+.+++++|++ .+++++..+..| .||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++
T Consensus 102 A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 102 AVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHH
Confidence 666666666666664 355666666666 56666666666666666666666655222 156666666666666666666
Q ss_pred HhhcCCCCcccCCCCCchH-HHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874 173 FLRAHPSLVTATTKDGNTC-AHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT 251 (1015)
Q Consensus 173 Ll~~~~~~~~~~~~~g~t~-L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 251 (1015)
|++++.+ ++..+..|.|| ||+|+..|+.+++++|++++.+..... +.|+..|+.+++++|+++|++++
T Consensus 180 Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~----------~~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 180 LLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN----------LENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT----------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------hhhhhcCCHHHHHHHHHcCCCCC
Confidence 6666554 44555556665 666666666666666665544432211 13344556666666666655544
Q ss_pred C
Q psy14874 252 D 252 (1015)
Q Consensus 252 ~ 252 (1015)
.
T Consensus 249 ~ 249 (285)
T 3kea_A 249 S 249 (285)
T ss_dssp T
T ss_pred C
Confidence 3
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=304.68 Aligned_cols=215 Identities=26% Similarity=0.334 Sum_probs=165.9
Q ss_pred ccCCccHHHHHHhCCCHHHHHHHHHhcchh-------hcccCCCCCcHHHHHHHcCCH-HHHHHHhhCCCCcccCCCCCC
Q psy14874 368 QENGYNPLHLACFGGHVTVVGLLLSRAADL-------LQSADKNGKTCLHIAATHGHL-QMVEVLLGQGAEINATDKGGA 439 (1015)
Q Consensus 368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~-------~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~i~~~~~~g~ 439 (1015)
+..+.+||+.|+..|+.++|++|++.+++. .+..+..|.|||+.|+..++. .+++.|+++|+++|.+|.+|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~ 87 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGS 87 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSC
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCC
Confidence 344567888888888888888888776643 345677889999999988775 488999999999999999999
Q ss_pred CHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy14874 440 RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519 (1015)
Q Consensus 440 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 519 (1015)
||||+|+..|+.+++++|++.|++++.. +..|.||++.|+..++.+++++|+++
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~~~~--------------------------~~~g~t~l~~a~~~~~~~~~~~Ll~~ 141 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANAGAR--------------------------NADQAVPLHLACQQGHFQVVKCLLDS 141 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCTTCC--------------------------CTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCcCcc--------------------------CCCCCCccccccccChHHHHHHHHHC
Confidence 9999999999999999999999988754 68899999999999999999999999
Q ss_pred CCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHH
Q psy14874 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 599 (1015)
Q Consensus 520 ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~ 599 (1015)
|+++ +.++..|+||||+|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.++|++
T Consensus 142 g~~~-----------------n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~ 203 (269)
T 4b93_B 142 NAKP-----------------NKKDLSGNTPLIYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVEL 203 (269)
T ss_dssp TCCS-----------------CCCCTTCCCHHHHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred CCCC-----------------CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence 9998 556788999999999999999999999765 4568899999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy14874 600 LLDLGASIDATDDQGQKPIHVAAQNNF 626 (1015)
Q Consensus 600 Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 626 (1015)
|+++|+|++.+|..|+||||+|+++++
T Consensus 204 Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 204 LLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999999999999999987764
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.6e-32 Score=287.20 Aligned_cols=219 Identities=26% Similarity=0.317 Sum_probs=185.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHH
Q psy14874 21 GWTPLLIACNRGHMELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHK--AFINS-KSRVGRTALHLAAM 96 (1015)
Q Consensus 21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~g--a~in~-~~~~g~t~L~~A~~ 96 (1015)
|.||||.||+.|+.++|++|+++|.+... .|..|.||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999987654 7999999999999999999999999999 55666 78899999999999
Q ss_pred cCCHHHHHHHHhcc-CccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874 97 NGYADLCRFLVHDH-AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~-~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~ 175 (1015)
.|+.+++++|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999542 27888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCC
Q psy14874 176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV-KAGASCTDEN 254 (1015)
Q Consensus 176 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll-~~ga~~~~~~ 254 (1015)
.++..++..+..| .||||+|+..|+.+++++|+ ++|++++..|
T Consensus 162 ~g~~~~~~~d~~g------------------------------------~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 162 LGKSAVNWQDKQG------------------------------------WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp TTCCCSCCCCTTS------------------------------------CCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred cCcccccCcCCCC------------------------------------CCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 8854445445444 45666666666777777777 7788888888
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHh
Q psy14874 255 KTGFTAVHLAAQNGHNQVLEEMRS 278 (1015)
Q Consensus 255 ~~~~t~L~~A~~~~~~~iv~~Ll~ 278 (1015)
..|.||+++|+.. +++++|++
T Consensus 206 ~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 206 NKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TTSCBGGGGCSST---THHHHHHT
T ss_pred CCCCcHHHHHHHH---HHHHHHHh
Confidence 8888888888654 44455543
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-32 Score=298.96 Aligned_cols=253 Identities=25% Similarity=0.211 Sum_probs=194.5
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC
Q psy14874 47 VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF---INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 123 (1015)
Q Consensus 47 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t 123 (1015)
++.+|.+|+||||+|+..|+.++|++|+++|++ ++.++..|.||||+|+..|+.+++++|++ .+++++..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Confidence 356899999999999999999999999999998 88999999999999999999999999995 68899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCC-------------CCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCch
Q psy14874 124 PLHLAAEAGQLQVCKLLLDLGASIDAT-------------DDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNT 190 (1015)
Q Consensus 124 ~L~~Aa~~g~~~ivk~Ll~~gad~n~~-------------d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 190 (1015)
|||+|+..|+.+++++|+++|++.+.. ...+.++++.++..+.......++......++..+..|.|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 999999999999999999999875432 2234566666666555544444443333346778899999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q psy14874 191 CAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHN 270 (1015)
Q Consensus 191 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~ 270 (1015)
|||+|+..|+.+++++|++.+.+.. ......|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLN--KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc
Confidence 9999999999999999999876643 22334589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccccccccCCCHHHHHHHcCC
Q psy14874 271 QVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ 302 (1015)
Q Consensus 271 ~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~ 302 (1015)
+++++|+++|++....+..|.||++.|....+
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHHHTTCCCCCCC---------------
T ss_pred HHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 99999999999999999999999999877653
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.5e-32 Score=284.54 Aligned_cols=215 Identities=28% Similarity=0.389 Sum_probs=186.5
Q ss_pred CCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy14874 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460 (1015)
Q Consensus 381 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 460 (1015)
+|+.+++++|++++++.....|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 36677888888888886666688899999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhcccc
Q psy14874 461 GE-KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAF 539 (1015)
Q Consensus 461 g~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~ 539 (1015)
+. +++. .+..|.||||.|+..|+.+++++|+++|+++
T Consensus 81 ~~~~~~~--------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------- 118 (223)
T 2f8y_A 81 RATDLDA--------------------------RMHDGTTPLILAARLAVEGMLEDLINSHADV---------------- 118 (223)
T ss_dssp TTSCTTC--------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----------------
T ss_pred CCCCccc--------------------------CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC----------------
Confidence 76 4443 3678899999999999999999999999887
Q ss_pred ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy14874 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIH 619 (1015)
Q Consensus 540 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~ 619 (1015)
+.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||++
T Consensus 119 -~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 196 (223)
T 2f8y_A 119 -NAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 196 (223)
T ss_dssp -TCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred -cCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHH
Confidence 446678999999999999999999999774 456888889999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHhCCc
Q psy14874 620 VAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 620 ~A~~~~~~~~~~~ll~~~~~ 639 (1015)
+|+.+++.+++++|++++..
T Consensus 197 ~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 197 IAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHhcchHHHHHHHHcCCC
Confidence 99999999999999987654
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5.5e-32 Score=281.99 Aligned_cols=214 Identities=24% Similarity=0.293 Sum_probs=173.7
Q ss_pred cCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy14874 31 RGHMELVNTMLNNHARVDVF-DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHD 109 (1015)
Q Consensus 31 ~g~~~iv~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~ 109 (1015)
.|+.+++++|+++|++++.. |.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 37888999999999998765 88999999999999999999999999999999999999999999999999999999987
Q ss_pred cCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc
Q psy14874 110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN 189 (1015)
Q Consensus 110 ~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~ 189 (1015)
.+..++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCc
Confidence 7668889999999999999999999999999999999999999999999999999999999999998765 344444444
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q psy14874 190 TCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGH 269 (1015)
Q Consensus 190 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~ 269 (1015)
||||.|++.|+.+++++|+++|++++..+..|.||+++|+.+++
T Consensus 160 ------------------------------------t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 160 ------------------------------------TPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp ------------------------------------CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred ------------------------------------CHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 45555555555556666666666666666666666666666666
Q ss_pred HHHHHHHHhCCC
Q psy14874 270 NQVLEEMRSSKA 281 (1015)
Q Consensus 270 ~~iv~~Ll~~~~ 281 (1015)
.+++++|++++.
T Consensus 204 ~~i~~~L~~~g~ 215 (223)
T 2f8y_A 204 HDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHHTTC
T ss_pred hHHHHHHHHcCC
Confidence 666666666554
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-32 Score=297.64 Aligned_cols=238 Identities=18% Similarity=0.169 Sum_probs=205.7
Q ss_pred hcCCH-HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874 30 NRGHM-ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 108 (1015)
Q Consensus 30 ~~g~~-~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~ 108 (1015)
+..+. +++++|.+. +++..|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++
T Consensus 8 ~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 8 NTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLF 83 (285)
T ss_dssp GGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHH
T ss_pred HhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHH
Confidence 34444 455555554 578899999999999999999999999999999999884 8999999999999999999995
Q ss_pred ccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHcCChHHHHHHhhcCCCCcccCCCC
Q psy14874 109 DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG-QKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD 187 (1015)
Q Consensus 109 ~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 187 (1015)
.+++++..+..|+||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|++++++... ...
T Consensus 84 -~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~ 160 (285)
T 3kea_A 84 -SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAI 160 (285)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CST
T ss_pred -CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccC
Confidence 688899999999999999999999999999999999999999999 7999999999999999999999887422 228
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q psy14874 188 GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATP-LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ 266 (1015)
Q Consensus 188 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~-L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~ 266 (1015)
|.||||+|+..|+.+++++|++++.+. ...+..|.|| ||+|+..|+.+++++|+++|++++..+. .|+.
T Consensus 161 g~t~L~~A~~~g~~~~v~~Ll~~gad~---n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~ 230 (285)
T 3kea_A 161 LLSCIHITIKNGHVDMMILLLDYMTST---NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVL 230 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT---CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGT
T ss_pred CccHHHHHHHcChHHHHHHHHHcCCCC---CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhh
Confidence 899999999999999999999876543 3344467787 9999999999999999999999988873 5677
Q ss_pred cCCHHHHHHHHhCCCccc
Q psy14874 267 NGHNQVLEEMRSSKALNV 284 (1015)
Q Consensus 267 ~~~~~iv~~Ll~~~~~~~ 284 (1015)
.|+.+++++|+++|.+..
T Consensus 231 ~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 231 LDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp TTCHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCC
Confidence 889999999999886544
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=281.40 Aligned_cols=226 Identities=26% Similarity=0.385 Sum_probs=157.6
Q ss_pred cCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCC-CCCCHHHHHHH
Q psy14874 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK-GGARSIHTAAR 447 (1015)
Q Consensus 369 ~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~-~g~t~L~~A~~ 447 (1015)
..+.+||+.|+..|+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||.|+.
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 3456667777777777777777766665 455666677777777777777777777777776665443 36777777777
Q ss_pred hCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh
Q psy14874 448 YGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527 (1015)
Q Consensus 448 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 527 (1015)
.|+.+++++|+++|++++.. +..|.||||.|+..|+.+++++|+++|+++
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~--------------------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---- 135 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLI--------------------------DGEGCSCIHLAAQFGHTSIVAYLIAKGQDV---- 135 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----
T ss_pred cCCHHHHHHHHHcCCCCccc--------------------------CCCCCCHHHHHHHcCHHHHHHHHHhcCCCc----
Confidence 77777777777776665533 466677777777777777777777777666
Q ss_pred hHHHhhhhccccccccCCCCCcHHHHHHHcCc-HHHHHHHHhcCCcccccccc-CCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy14874 528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGY-ADLCRFLVHDHAAVIDILTL-RKQTPLHLAAEAGQLQVCKLLLDLGA 605 (1015)
Q Consensus 528 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~-~g~T~L~~A~~~~~~~iv~~Ll~~ga 605 (1015)
+.++..|.||||+|+..++ .+++++|++.+.. ++..+. .|.||||+|+..|+.+++++|+++|+
T Consensus 136 -------------~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 201 (240)
T 3eu9_A 136 -------------DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201 (240)
T ss_dssp -------------TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred -------------cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 3455567777777775554 5666666655443 344444 77888888888888888888888888
Q ss_pred CCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 606 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 639 (1015)
+++.+|..|.||+++|++.++.+++++|++.+..
T Consensus 202 ~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 202 NVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 8888888888888888888888888888876543
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=4e-32 Score=297.05 Aligned_cols=274 Identities=22% Similarity=0.284 Sum_probs=214.1
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCC---------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 27 IACNRGHMELVNTMLNNHARVDV---------FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN 97 (1015)
Q Consensus 27 ~A~~~g~~~iv~~Ll~~g~~~~~---------~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~ 97 (1015)
.+++.|+.+.++.++..+..+.. .+.+|.||||.|+..|+.+++++|+++|+++|..+..|.||||+|+..
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 83 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID 83 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 46777777878777776544332 233567899999999999999999999999998888999999999999
Q ss_pred CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874 98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177 (1015)
Q Consensus 98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~ 177 (1015)
|+.+++++|++ .+++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.++++.++...
T Consensus 84 g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~ 162 (299)
T 1s70_B 84 DNVDMVKFLVE-NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162 (299)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhc
Confidence 99999999995 67888888889999999999999999999999999999999999999999999999999998888755
Q ss_pred CCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q psy14874 178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTG 257 (1015)
Q Consensus 178 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~ 257 (1015)
.......+..+.+++. ..+..++..+.. .....+..|.||||.|+..|+.+++++|+++|++++..|..|
T Consensus 163 ~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g 232 (299)
T 1s70_B 163 GVDIEAARKEEERIML--------RDARQWLNSGHI--NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG 232 (299)
T ss_dssp TCCHHHHHHHHHHHHH--------HHHHHHHHHTCC--CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred CCCchhhhhhhhhHHH--------HHHHHHHhccCc--chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence 4433322222222222 223334443322 122334568899999999999999999999999999999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874 258 FTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312 (1015)
Q Consensus 258 ~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 312 (1015)
.||||+|+..|+.+++++|++.|++....+..|.||+++|+. +..+.++.+++.
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~ 286 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQKK 286 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999999999998888888889999999865 455666666654
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-32 Score=297.55 Aligned_cols=249 Identities=26% Similarity=0.325 Sum_probs=213.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN 97 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~ 97 (1015)
+..|.||||.||..|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
|+.+++++|++ .+.+++..+..|.||||+|+..|+.++++.++. .|++++..+..+.++++ ..+..++..
T Consensus 117 g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~ 187 (299)
T 1s70_B 117 GYLDIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNS 187 (299)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHH
T ss_pred CCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhc
Confidence 99999999995 588899999999999999999999999998875 45655443332222322 334556666
Q ss_pred CCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy14874 177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT 256 (1015)
Q Consensus 177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 256 (1015)
+.......+..|.||||+|+..|+.+++++|++.+.+.. ..+..|.||||+|+..|+.+++++|+++|++++..|..
T Consensus 188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 264 (299)
T 1s70_B 188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN---IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264 (299)
T ss_dssp TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCC
Confidence 666666778899999999999999999999999876543 33457899999999999999999999999999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhC
Q psy14874 257 GFTAVHLAAQNGHNQVLEEMRSS 279 (1015)
Q Consensus 257 ~~t~L~~A~~~~~~~iv~~Ll~~ 279 (1015)
|.||+++|++.. .+.++.+++.
T Consensus 265 g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 265 GQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp SCCTTTSCCSGG-GHHHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHHHHH
Confidence 999999997654 4444555443
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=3.6e-31 Score=277.67 Aligned_cols=193 Identities=25% Similarity=0.353 Sum_probs=172.8
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----CCCCCCCCcHHHH
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI-----NSKSRVGRTALHL 93 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i-----n~~~~~g~t~L~~ 93 (1015)
.|+||||.|++.|+.++|++|+++ |++++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999998 9999999999999999999999999999999999987 6778899999999
Q ss_pred HHHcCCHHHHHHHHhccCcccccccc-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILTL-------------RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 160 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~~-------------~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~ 160 (1015)
|+..|+.+++++|++ .+.+++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 82 A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 999999999999995 5777777665 79999999999999999999999999999999999999999
Q ss_pred HHHcCChHHH----HHHhhcCCCCc-----ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCc
Q psy14874 161 AAQNNFPEVA----QIFLRAHPSLV-----TATTKDGNTCAHIAAMQGSVGVIEELMKFDRS 213 (1015)
Q Consensus 161 A~~~g~~~iv----~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~ 213 (1015)
|+..|+.+++ ++|++.+++.. +..+..|.||||+|+..|+.+++++|++++..
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999988 99999887643 46677777777777777777777777775544
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.8e-30 Score=265.72 Aligned_cols=193 Identities=21% Similarity=0.325 Sum_probs=182.1
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
++.|.||||.|+..|+.+.|+.|++++. +++..|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 4679999999999999999999999886 999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCC-----hHHH
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNF-----PEVA 170 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g-ad~n~~d~~~~t~L~~A~~~g~-----~~iv 170 (1015)
.|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++| ++++..|..|.||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 999999999998888899999999999999999999999999999999 9999999999999999999998 8999
Q ss_pred HHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy14874 171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD 211 (1015)
Q Consensus 171 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~ 211 (1015)
++|++++.+ ++..+..|.||+|+|+..|+.+++++|++++
T Consensus 162 ~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999877 5778888999999999999999999888753
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=4.7e-32 Score=285.11 Aligned_cols=199 Identities=22% Similarity=0.289 Sum_probs=173.0
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy14874 15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHA----RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTA 90 (1015)
Q Consensus 15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~----~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~ 90 (1015)
|.+|.+|+||||+|+..|+.+++++|++.+. ++|..|..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 5678999999999999999999999999875 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccC-----ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHc
Q psy14874 91 LHLAAMNGYADLCRFLVHDHA-----AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD-QGQKPIHVAAQN 164 (1015)
Q Consensus 91 L~~A~~~g~~eiv~~Ll~~~~-----~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~-~~~t~L~~A~~~ 164 (1015)
||+|+..|+.+++++|++... ..++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999997542 23677888999999999999999999999999999999998 999999999999
Q ss_pred CChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcc
Q psy14874 165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214 (1015)
Q Consensus 165 g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~ 214 (1015)
|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|++++.+.
T Consensus 162 ~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 162 QNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp TCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 999999999999876 5667777777777777777777777777766543
No 42
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.4e-30 Score=254.30 Aligned_cols=157 Identities=34% Similarity=0.525 Sum_probs=149.7
Q ss_pred cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874 23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL 102 (1015)
Q Consensus 23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei 102 (1015)
++|+.||+.|+.++|++|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCC
Q psy14874 103 CRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180 (1015)
Q Consensus 103 v~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~ 180 (1015)
|++|++ .++++|.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 86 v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 86 VKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999995 68899999999999999999999999999999999999999999999999999999999999999999874
No 43
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.9e-32 Score=302.43 Aligned_cols=265 Identities=12% Similarity=0.115 Sum_probs=210.4
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC---------------
Q psy14874 19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSK--------------- 83 (1015)
Q Consensus 19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~--------------- 83 (1015)
..+.+|+| ....++|++|+++|++++..|..|.++++ |+.++|++|+++|++++..
T Consensus 21 ~~~~~~~~----~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~ 91 (327)
T 1sw6_A 21 DRTAGPII----TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS 91 (327)
T ss_dssp ----CCEE----ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------
T ss_pred cccccchh----hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccc
Confidence 44555555 56668899999999999999999999987 9999999999999886651
Q ss_pred --CCCCCcHHHHHHHcCCHHHHHHHHhccCccccc-cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy14874 84 --SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI-LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 160 (1015)
Q Consensus 84 --~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~-~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~ 160 (1015)
.....+.+|.|+..+..+++++|+ ..+.++|. .+..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+
T Consensus 92 ~~~~~~~~~~~~a~~~~~~~~~~~l~-~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~ 170 (327)
T 1sw6_A 92 EGGSSNQQQQHVSFDSLLQEVNDAFP-NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK 170 (327)
T ss_dssp ------------CHHHHHHHHHHHCT-TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHH
T ss_pred cccCCccchhHHHHHhhHHHHHHHHH-hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 111223357788888888999888 56889999 89999999999999999999999999999999999999999999
Q ss_pred HHHcCC---hHHHHHHhhcCCCCcccCCCCCchHHHHHHH----cCCHHHHHHHHhcCCc-----------------ccc
Q psy14874 161 AAQNNF---PEVAQIFLRAHPSLVTATTKDGNTCAHIAAM----QGSVGVIEELMKFDRS-----------------GVI 216 (1015)
Q Consensus 161 A~~~g~---~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~~~~-----------------~~~ 216 (1015)
|+..|+ .++++.|++.+...++..+..|.||||+|+. .|+.++++.|++.... +..
T Consensus 171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~ 250 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 250 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence 999998 6777888877655578899999999999999 8999999999986321 222
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHH
Q psy14874 217 SARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHV 296 (1015)
Q Consensus 217 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~ 296 (1015)
....+..|.||||.|+. +++|+++ +++..|..|.||||+|+..|+.+++++|++.|++....+..|.|||++
T Consensus 251 ~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 251 PNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 322 (327)
T ss_dssp ---------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred cccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 23345678899999985 8999998 578899999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q psy14874 297 AAYFG 301 (1015)
Q Consensus 297 A~~~~ 301 (1015)
|+..|
T Consensus 323 A~~~g 327 (327)
T 1sw6_A 323 GAGLE 327 (327)
T ss_dssp TCC--
T ss_pred HHhcC
Confidence 97654
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=4.4e-31 Score=277.71 Aligned_cols=217 Identities=26% Similarity=0.386 Sum_probs=173.7
Q ss_pred ccCCccHHHHHHhCCCHHHHHHHHHhcch---hhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHH
Q psy14874 368 QENGYNPLHLACFGGHVTVVGLLLSRAAD---LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHT 444 (1015)
Q Consensus 368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~---~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~ 444 (1015)
+.+|.||||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 84 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 45678888888888888888888877653 367778889999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q psy14874 445 AARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524 (1015)
Q Consensus 445 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 524 (1015)
|+..|+.+++++|+++|++.... ..++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~--------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 85 ACEQGCLASVGVLTQSCTTPHLH--------------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSS--------------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHcCCHHHHHHHHhcccchhHH--------------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999988764322 1234557788999999999999999999999988884
Q ss_pred chhhHHHhhhhccccccccCC-CCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHc
Q psy14874 525 ATDKVCDALLTHKAFINSKSR-VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603 (1015)
Q Consensus 525 ~~~~~~~~ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ 603 (1015)
.++. .|.||||+|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.+++++|+++
T Consensus 145 -----------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 206 (236)
T 1ikn_D 145 -----------------AQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 206 (236)
T ss_dssp -----------------CCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTT
T ss_pred -----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHc
Confidence 4555 7888999999888889998888764 45678888888999999888888999999888
Q ss_pred CCCCC--CCCCCCCCHHHHHH
Q psy14874 604 GASID--ATDDQGQKPIHVAA 622 (1015)
Q Consensus 604 ga~~~--~~d~~g~t~l~~A~ 622 (1015)
|++.. .++..|.||.+.+.
T Consensus 207 ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 207 TLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp SCGGGSSCCCCCTTTCCCCC-
T ss_pred chhhhhcCCccchHHHHhhhc
Confidence 88765 77788888776543
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=4.2e-29 Score=255.45 Aligned_cols=192 Identities=21% Similarity=0.331 Sum_probs=166.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhhCCC-CcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHH
Q psy14874 403 KNGKTCLHIAATHGHLQMVEVLLGQGA-EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGL 481 (1015)
Q Consensus 403 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ 481 (1015)
..+.||||.|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------------- 68 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ-------------- 68 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--------------
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC--------------
Confidence 457788888888888888888888765 88888888888888888888888888888888887654
Q ss_pred HHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcH
Q psy14874 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL-GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560 (1015)
Q Consensus 482 ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~ 560 (1015)
+..|.||||.|+..|+.+++++|+ ..++++ +..+..|.||||+|+..|+.
T Consensus 69 ------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~ 119 (201)
T 3hra_A 69 ------------NSISDSPYLYAGAQGRTEILAYMLKHATPDL-----------------NKHNRYGGNALIPAAEKGHI 119 (201)
T ss_dssp ------------CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT-----------------TCCCTTSCCSHHHHHHTTCH
T ss_pred ------------CCCCCCHHHHHHHcCCHHHHHHHHhccCccc-----------------ccccCCCCcHHHHHHHcCCH
Confidence 577889999999999999999998 455565 55667889999999999999
Q ss_pred HHHHHHHhcCCccccccccCCCCHHHHHHHcCC-----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874 561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ-----LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635 (1015)
Q Consensus 561 ~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~-----~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~ 635 (1015)
+++++|++.+..+++..+..|.||||+|+..++ .+++++|+++|++++.+|..|+|||++|+.+++.+++++|++
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 120 DNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 999999988877888889999999999999888 999999999999999999999999999999999999999987
Q ss_pred hC
Q psy14874 636 AH 637 (1015)
Q Consensus 636 ~~ 637 (1015)
++
T Consensus 200 ~G 201 (201)
T 3hra_A 200 YN 201 (201)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=266.45 Aligned_cols=209 Identities=23% Similarity=0.319 Sum_probs=129.7
Q ss_pred CccHHHHHHhCCCHHHHHHHHHh-cchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCc-----ccCCCCCCCHHHH
Q psy14874 371 GYNPLHLACFGGHVTVVGLLLSR-AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI-----NATDKGGARSIHT 444 (1015)
Q Consensus 371 g~tpL~~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i-----~~~~~~g~t~L~~ 444 (1015)
|.||||.|+..|+.+++++|++. +.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 34555555555555555555544 333 3444555555555555555555555555555544 3444455555555
Q ss_pred HHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q psy14874 445 AARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524 (1015)
Q Consensus 445 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 524 (1015)
|+..|+.+++++|+++|++++........ ....+..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~-------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~- 147 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVF-------------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI- 147 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGG-------------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcce-------------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-
Confidence 55555555555555555555433211000 0001234568999999999999999999999999888
Q ss_pred chhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHH----HHHHhcCCccc-----cccccCCCCHHHHHHHcCCHH
Q psy14874 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC----RFLVHDHAAVI-----DILTLRKQTPLHLAAEAGQLQ 595 (1015)
Q Consensus 525 ~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v----~~Ll~~~~~~~-----~~~~~~g~T~L~~A~~~~~~~ 595 (1015)
+.++..|+||||+|+..|+.+++ ++|++.+.... +..|..|+||||+|+..|+.+
T Consensus 148 ----------------~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 148 ----------------RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp ----------------TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHH
T ss_pred ----------------CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHH
Confidence 45667888888888888888877 77777665432 566777888888888888888
Q ss_pred HHHHHHHcCCCCCCC
Q psy14874 596 VCKLLLDLGASIDAT 610 (1015)
Q Consensus 596 iv~~Ll~~ga~~~~~ 610 (1015)
++++|+++|.+...+
T Consensus 212 ~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 212 MFQHLMQKRKHIAAA 226 (232)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHhcCccchhh
Confidence 888888877665443
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.9e-31 Score=293.08 Aligned_cols=238 Identities=16% Similarity=0.104 Sum_probs=193.8
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-----------------CCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVF-----------------DQEGRSALHLAAEHGYLKVCDALLTH 76 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------------d~~g~t~L~~A~~~g~~~iv~~Ll~~ 76 (1015)
+|.+|..|.|+++ |+.++|++|+++|++.+.. .....+.+|.|+..+..+++++|++.
T Consensus 45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~ 119 (327)
T 1sw6_A 45 IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 119 (327)
T ss_dssp CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS
T ss_pred cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc
Confidence 6888999999987 9999999999999876541 11112345888888889999999999
Q ss_pred CCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC---HHHHHHHHHCC-CCCCCCC
Q psy14874 77 KAFINS-KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ---LQVCKLLLDLG-ASIDATD 151 (1015)
Q Consensus 77 ga~in~-~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~---~~ivk~Ll~~g-ad~n~~d 151 (1015)
|+++|. ++..|.||||+|+..|+.++|++|++ .+++++..+..|+||||+|+..|+ .++++.|++.+ ++++.+|
T Consensus 120 g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~-~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK-HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 999999 89999999999999999999999995 589999999999999999999998 78888888887 7899999
Q ss_pred CCCCcHHHHHHH----cCChHHHHHHhhcC-------------------CCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874 152 DQGQKPIHVAAQ----NNFPEVAQIFLRAH-------------------PSLVTATTKDGNTCAHIAAMQGSVGVIEELM 208 (1015)
Q Consensus 152 ~~~~t~L~~A~~----~g~~~iv~~Ll~~~-------------------~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 208 (1015)
..|.||||+|+. .|+.+++++|++.+ ...++..+..|.||||.|+. +++|+
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll 272 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWII 272 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHH
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHH
Confidence 999999999999 89999999999873 33367788999999999985 88888
Q ss_pred hcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q psy14874 209 KFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNG 268 (1015)
Q Consensus 209 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~ 268 (1015)
+.+ ....+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+++|
T Consensus 273 ~~~-----~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 273 ANM-----LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHT-----TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HhC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 863 2334567999999999999999999999999999999999999999998764
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=3.8e-30 Score=274.19 Aligned_cols=193 Identities=24% Similarity=0.289 Sum_probs=170.2
Q ss_pred CCCcHHHHHHhcCCHH----HHHHHHhCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCC-----
Q psy14874 20 IGWTPLLIACNRGHME----LVNTMLNNHARVDV----FDQEGRSALHLAAEH---GYLKVCDALLTHKAFINSK----- 83 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~----iv~~Ll~~g~~~~~----~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~----- 83 (1015)
.|+||||.||+.|+.+ ++++|+++|++++. .|..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4899999999999997 67888889999998 899999999999999 9999999999999887633
Q ss_pred ------CCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccC-------------CCCHHHHHHHcCCHHHHHHHHH--
Q psy14874 84 ------SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-------------KQTPLHLAAEAGQLQVCKLLLD-- 142 (1015)
Q Consensus 84 ------~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~-------------g~t~L~~Aa~~g~~~ivk~Ll~-- 142 (1015)
+..|.||||+|+..|+.+++++|++ .+++++..+.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 3679999999999999999999995 57888888876 9999999999999999999999
Q ss_pred -CCCCCCCCCCCCCcHHHHHHH--cCChH-------HHHHHhhcCCCCc------ccCCCCCchHHHHHHHcCCHHHHHH
Q psy14874 143 -LGASIDATDDQGQKPIHVAAQ--NNFPE-------VAQIFLRAHPSLV------TATTKDGNTCAHIAAMQGSVGVIEE 206 (1015)
Q Consensus 143 -~gad~n~~d~~~~t~L~~A~~--~g~~~-------iv~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~g~~~iv~~ 206 (1015)
+|+++|.+|..|.||||+|+. .++.+ ++++|++++.+.. +..+..|.||||+|+..|+.+++++
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 999999999999999999998 78888 9999998877632 6677788888888888888888888
Q ss_pred HHhcCCc
Q psy14874 207 LMKFDRS 213 (1015)
Q Consensus 207 Ll~~~~~ 213 (1015)
|++++..
T Consensus 240 Ll~~g~~ 246 (256)
T 2etb_A 240 ILQREFS 246 (256)
T ss_dssp HHHHHHH
T ss_pred HHhCCCC
Confidence 8876544
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.3e-28 Score=241.96 Aligned_cols=159 Identities=37% Similarity=0.580 Sum_probs=132.5
Q ss_pred cHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhh
Q psy14874 407 TCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486 (1015)
Q Consensus 407 t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~ 486 (1015)
++|+.|++.|+.++|+.|+++|+|+|.+|..|.|||++|+..++.+++++|+++|++++..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~------------------- 66 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK------------------- 66 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhh-------------------
Confidence 4688899999999999999999999999999999999999999999999999998887754
Q ss_pred hhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHH
Q psy14874 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566 (1015)
Q Consensus 487 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 566 (1015)
|..|.||||+|+..|+.++|++|+++|+++ +.++..|+||||+|+..|+.++|++|
T Consensus 67 -------d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-----------------n~~d~~G~TpLh~A~~~g~~~~v~~L 122 (169)
T 4gpm_A 67 -------DSDGRTPLHHAAENGHKEVVKLLISKGADV-----------------NAKDSDGRTPLHHAAENGHKEVVKLL 122 (169)
T ss_dssp -------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------ccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-----------------CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 678899999999999999999999998888 45667888888888888888888888
Q ss_pred HhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874 567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609 (1015)
Q Consensus 567 l~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~ 609 (1015)
++.+ .+++..|.+|+||||+|+..|+.+++++|+++||+++-
T Consensus 123 l~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 123 ISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 8765 45678888899999999999999999999999988764
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=2.6e-29 Score=267.68 Aligned_cols=217 Identities=21% Similarity=0.234 Sum_probs=177.5
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHhhCCCCccc----CCCCCCCHHHHHHHh---CCHHHHHHHHhcCCCCcccccccc
Q psy14874 404 NGKTCLHIAATHGHLQ----MVEVLLGQGAEINA----TDKGGARSIHTAARY---GHVGIINTLLQKGEKVDVTTNNLA 472 (1015)
Q Consensus 404 ~g~t~L~~A~~~g~~~----iv~~Ll~~ga~i~~----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~ 472 (1015)
.|+||||.|+..|+.+ ++++|+++|++++. .|..|.||||+|+.. |+.+++++|+++|++++.......
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3788999999999986 66777778999998 889999999999998 999999999998877653210000
Q ss_pred cCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHH
Q psy14874 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552 (1015)
Q Consensus 473 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~ 552 (1015)
......|..|.||||+|+..|+.+++++|+++|++++..+.... ...+.+..+..|.||||
T Consensus 81 ---------------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~----~~~~~~~~~~~g~tpL~ 141 (256)
T 2etb_A 81 ---------------AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF----FQKHQGTCFYFGELPLS 141 (256)
T ss_dssp ---------------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG----GSCCSSSCCCSCSSHHH
T ss_pred ---------------cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccc----ccccccccccCCCCHHH
Confidence 00112356799999999999999999999999999976542100 00111222334999999
Q ss_pred HHHHcCcHHHHHHHHhc--CCccccccccCCCCHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CCCCCCC
Q psy14874 553 LAAMNGYADLCRFLVHD--HAAVIDILTLRKQTPLHLAAE--AGQLQ-------VCKLLLDLGASI-------DATDDQG 614 (1015)
Q Consensus 553 ~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~T~L~~A~~--~~~~~-------iv~~Ll~~ga~~-------~~~d~~g 614 (1015)
+|+..|+.++|++|++. .+.+++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|
T Consensus 142 ~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g 221 (256)
T 2etb_A 142 LAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQG 221 (256)
T ss_dssp HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTS
T ss_pred HHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCC
Confidence 99999999999999985 566789999999999999999 88888 999999999999 8999999
Q ss_pred CCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874 615 QKPIHVAAQNNFPEVAQIFLRAHPS 639 (1015)
Q Consensus 615 ~t~l~~A~~~~~~~~~~~ll~~~~~ 639 (1015)
+||||+|+..|+.+++++|+++++.
T Consensus 222 ~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 222 LTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999999999999999998654
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.2e-29 Score=271.01 Aligned_cols=165 Identities=22% Similarity=0.229 Sum_probs=131.3
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCC--
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLN----NHARVD----VFDQEGRSALHLAAEH---GYLKVCDALLTHKAFI-- 80 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~----~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~i-- 80 (1015)
.+..|..|+||||.||+.|+.++|+.|++ .+++++ ..|..|+||||+|+.. |+.+++++|+++|+++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 46678999999999999999998888886 566665 3588999999999987 9999999999998753
Q ss_pred -----CC----CCCCCCcHHHHHHHcCCHHHHHHHHhccCcccccccc--------------CCCCHHHHHHHcCCHHHH
Q psy14874 81 -----NS----KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL--------------RKQTPLHLAAEAGQLQVC 137 (1015)
Q Consensus 81 -----n~----~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~--------------~g~t~L~~Aa~~g~~~iv 137 (1015)
+. .+..|.||||+|+..|+.++|++|++ .+++++..+. .|.||||+|+..|+.+++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 22 45678888888888888888888885 4777777776 688888888888888888
Q ss_pred HHHHH---CCCCCCCCCCCCCcHHHHHHHcCC---------hHHHHHHhhcCCC
Q psy14874 138 KLLLD---LGASIDATDDQGQKPIHVAAQNNF---------PEVAQIFLRAHPS 179 (1015)
Q Consensus 138 k~Ll~---~gad~n~~d~~~~t~L~~A~~~g~---------~~iv~~Ll~~~~~ 179 (1015)
++|++ +|++++.+|..|.||||+|+..|+ .+++++|++++.+
T Consensus 165 ~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 165 KFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence 88888 888888888888888888888777 5677777766554
No 52
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.1e-28 Score=250.08 Aligned_cols=167 Identities=30% Similarity=0.447 Sum_probs=159.8
Q ss_pred hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874 10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT 89 (1015)
Q Consensus 10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t 89 (1015)
+...+|.+|..|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHH
Q psy14874 90 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 169 (1015)
Q Consensus 90 ~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~i 169 (1015)
|||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..|+.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 9999999999999999995 688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q psy14874 170 AQIFLRAH 177 (1015)
Q Consensus 170 v~~Ll~~~ 177 (1015)
+++|++.+
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999864
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=3e-28 Score=262.20 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=141.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhccCc
Q psy14874 44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLT----HKAFIN----SKSRVGRTALHLAAMN---GYADLCRFLVHDHAA 112 (1015)
Q Consensus 44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~in----~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~ 112 (1015)
++..+..|..|+||||.|++.|+.++|+.|++ .+++++ ..+..|.||||+|+.. |+.+++++|++.+ +
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g-a 81 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA-R 81 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH-H
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh-c
Confidence 45566789999999999999999999888886 667666 4578999999999987 9999999999653 2
Q ss_pred c-------ccc----cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHHcCCh
Q psy14874 113 V-------IDI----LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD--------------QGQKPIHVAAQNNFP 167 (1015)
Q Consensus 113 ~-------i~~----~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~--------------~~~t~L~~A~~~g~~ 167 (1015)
. ++. .+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 2 222 566899999999999999999999999999999987 677888888888888
Q ss_pred HHHHHHhh---cCCCCcccCCCCCchHHHHHHHcCC---------HHHHHHHHhcCCcccc----cccCCCCCCcHHHHH
Q psy14874 168 EVAQIFLR---AHPSLVTATTKDGNTCAHIAAMQGS---------VGVIEELMKFDRSGVI----SARNRVTEATPLQLA 231 (1015)
Q Consensus 168 ~iv~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~~----~~~~~~~~~t~L~~A 231 (1015)
+++++|++ .+.+ ++..+..|.||||+|+..|+ .+++++|++.+.+... ....+..|.||||+|
T Consensus 162 ~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 162 AIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 88888887 5554 56677777777777777665 4444455443332210 011223344444444
Q ss_pred HHcCCHHHHHHHHHcCC
Q psy14874 232 AEGGHANVVRVLVKAGA 248 (1015)
Q Consensus 232 ~~~g~~~iv~~Ll~~ga 248 (1015)
++.|+.+++++|+++|+
T Consensus 241 ~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHTTCHHHHHHHHHHHT
T ss_pred HHhChHHHHHHHHHCCC
Confidence 44444444444444444
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.8e-28 Score=262.00 Aligned_cols=195 Identities=20% Similarity=0.260 Sum_probs=163.8
Q ss_pred CCCCCcHHHHHHhcCCHHH----HHHHHhCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHhCCCC-------
Q psy14874 18 TSIGWTPLLIACNRGHMEL----VNTMLNNHARVDVFD----QEGRSALHLAA---EHGYLKVCDALLTHKAF------- 79 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~i----v~~Ll~~g~~~~~~d----~~g~t~L~~A~---~~g~~~iv~~Ll~~ga~------- 79 (1015)
+..|+||||.||+.|+.+. +++|++.|++++..+ ..|+||||+|+ +.|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 4678999999999999995 555555999998665 77999999999 77999999999998854
Q ss_pred ----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccc--------------cCCCCHHHHHHHcCCHHHHHHHH
Q psy14874 80 ----INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILT--------------LRKQTPLHLAAEAGQLQVCKLLL 141 (1015)
Q Consensus 80 ----in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~--------------~~g~t~L~~Aa~~g~~~ivk~Ll 141 (1015)
++..+..|.||||+|+..|+.++|++|++ .+++++..+ ..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 44455589999999999999999999995 578888887 57999999999999999999999
Q ss_pred H---CCCCCCCCCCCCCcHHHHHHHcCC---------hHHHHHHhhcCCCCc------ccCCCCCchHHHHHHHcCCHHH
Q psy14874 142 D---LGASIDATDDQGQKPIHVAAQNNF---------PEVAQIFLRAHPSLV------TATTKDGNTCAHIAAMQGSVGV 203 (1015)
Q Consensus 142 ~---~gad~n~~d~~~~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~g~~~i 203 (1015)
+ .|++++.+|..|.||||+|+..|+ .+++++|++++.+.. +..+..|.||||+|+..|+.++
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9 899999999999999999998887 688899988876532 4567777777777777777777
Q ss_pred HHHHHhcCCc
Q psy14874 204 IEELMKFDRS 213 (1015)
Q Consensus 204 v~~Ll~~~~~ 213 (1015)
+++|++++..
T Consensus 241 v~~Ll~~g~~ 250 (260)
T 3jxi_A 241 FQHIIRREIA 250 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhCCC
Confidence 7777775544
No 55
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.5e-27 Score=235.89 Aligned_cols=159 Identities=23% Similarity=0.322 Sum_probs=153.4
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
.|.||||.|++.|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||+|+|+..|+.+++++|++++..
T Consensus 82 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 82 TDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 999999995 5888999999999999999999999999999999999999999999999999999999999999987654
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.9e-27 Score=234.15 Aligned_cols=160 Identities=31% Similarity=0.450 Sum_probs=150.4
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
....+.|||+.||+.|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.
T Consensus 90 ~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 90 FGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 999999999995 6888999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C
Q psy14874 177 H 177 (1015)
Q Consensus 177 ~ 177 (1015)
|
T Consensus 169 G 169 (169)
T 2y1l_E 169 N 169 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=3e-28 Score=260.18 Aligned_cols=221 Identities=20% Similarity=0.238 Sum_probs=173.9
Q ss_pred CCCCCcHHHHHHHcCCHHH----HHHHhhCCCCcccCC----CCCCCHHHHHH---HhCCHHHHHHHHhcCCCCcccccc
Q psy14874 402 DKNGKTCLHIAATHGHLQM----VEVLLGQGAEINATD----KGGARSIHTAA---RYGHVGIINTLLQKGEKVDVTTNN 470 (1015)
Q Consensus 402 d~~g~t~L~~A~~~g~~~i----v~~Ll~~ga~i~~~~----~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~~~~~~~~ 470 (1015)
+..|+|+||.|++.|+.+. +++|++.|++++..+ ..|.||||+|+ +.|+.+++++|+++|++......
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~- 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE- 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH-
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh-
Confidence 4567888999999998884 455555888888766 66899999998 67889999999988765432100
Q ss_pred cccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcH
Q psy14874 471 LACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550 (1015)
Q Consensus 471 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~ 550 (1015)
+ ........|..|.||||+|+..|+.++|++|+++|++++..+.-. .....+.+..+..|.||
T Consensus 81 -----------~---~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~---~~~~~~~~~~~~~g~tp 143 (260)
T 3jxi_A 81 -----------F---INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR---FFQPKDEGGYFYFGELP 143 (260)
T ss_dssp -----------H---HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC---CCSSSCCCCSCCSCSSH
T ss_pred -----------h---hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc---ccCcccccccccCCCCH
Confidence 0 001122335689999999999999999999999999997643200 00001112222579999
Q ss_pred HHHHHHcCcHHHHHHHHhc--CCccccccccCCCCHHHHHHHcCC---------HHHHHHHHHcCCCC-------CCCCC
Q psy14874 551 LHLAAMNGYADLCRFLVHD--HAAVIDILTLRKQTPLHLAAEAGQ---------LQVCKLLLDLGASI-------DATDD 612 (1015)
Q Consensus 551 L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~T~L~~A~~~~~---------~~iv~~Ll~~ga~~-------~~~d~ 612 (1015)
||+|+..|+.++|++|++. .+.+++.+|..|+||||+|+..++ .+++++|+++|+++ +.+|.
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 9999999999999999985 566779999999999999999888 79999999999999 67999
Q ss_pred CCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874 613 QGQKPIHVAAQNNFPEVAQIFLRAHPSL 640 (1015)
Q Consensus 613 ~g~t~l~~A~~~~~~~~~~~ll~~~~~~ 640 (1015)
.|+||||+|+..|+.+++++|+++++..
T Consensus 224 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 224 DGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999999999999999999987543
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.9e-27 Score=236.32 Aligned_cols=169 Identities=21% Similarity=0.287 Sum_probs=152.5
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 21 GWTPLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 21 g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
+.||||.|++.|+.+++++|+++|.+ ++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 57899999999999999999999987 88889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
.+++++|+ +.+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+
T Consensus 82 ~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 82 TDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999 56888999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred CcccCCCCCchH
Q psy14874 180 LVTATTKDGNTC 191 (1015)
Q Consensus 180 ~~~~~~~~g~t~ 191 (1015)
....+..|.||
T Consensus 161 -~~~~~~~~~~p 171 (172)
T 3v30_A 161 -LFQSNLVPADP 171 (172)
T ss_dssp -HSCC-------
T ss_pred -HhcccCCCCCC
Confidence 34445555443
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=4e-27 Score=231.47 Aligned_cols=159 Identities=27% Similarity=0.355 Sum_probs=145.1
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874 19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG 98 (1015)
Q Consensus 19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g 98 (1015)
....||||.|++.|+.++|++|+++|++++..|..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 356799999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874 99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-IDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177 (1015)
Q Consensus 99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad-~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~ 177 (1015)
+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++++
T Consensus 82 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 82 FLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999995 5788899999999999999999999999999999998 5889999999999999999999999999887
Q ss_pred CC
Q psy14874 178 PS 179 (1015)
Q Consensus 178 ~~ 179 (1015)
++
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 53
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.3e-27 Score=256.88 Aligned_cols=190 Identities=23% Similarity=0.302 Sum_probs=169.3
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH-
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNNHAR--VDVFDQEGRSALHLAAEHGYLKVCDALLTHKA-FINSKSRVGRTALHLAA- 95 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~in~~~~~g~t~L~~A~- 95 (1015)
.+++++|.|+..|+.+.++.+++.+.+ +|..|.+|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 356788999999999999999887766 88889999999999999999999999999998 89999999999999999
Q ss_pred ----HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHH
Q psy14874 96 ----MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 171 (1015)
Q Consensus 96 ----~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~ 171 (1015)
..++.+++++|++ .+...+..+..|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.++++
T Consensus 155 ~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFR-LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCCSHHHHHHHHHHHH-HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHhhhhhhHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 6688999999995 45677888888999999999999999999999999999999999999999999999999999
Q ss_pred HHhh-cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy14874 172 IFLR-AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD 211 (1015)
Q Consensus 172 ~Ll~-~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~ 211 (1015)
+|++ .+.+ ++..+..|.||||+|+..|+.+++++|+++.
T Consensus 234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999 4544 6788889999999999999999999888743
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-26 Score=225.08 Aligned_cols=151 Identities=29% Similarity=0.413 Sum_probs=145.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy14874 21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 100 (1015)
Q Consensus 21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ 100 (1015)
+.||||.|++.|+.++|++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4689999999999999999999999887 688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874 101 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173 (1015)
Q Consensus 101 eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L 173 (1015)
+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 81 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999994 6889999999999999999999999999999999999999999999999999999999999987
No 62
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=9.3e-27 Score=250.17 Aligned_cols=167 Identities=25% Similarity=0.320 Sum_probs=159.6
Q ss_pred hHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH-----HcCCHHHHHHHHhCCCCCCCCC
Q psy14874 11 SKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAA-----EHGYLKVCDALLTHKAFINSKS 84 (1015)
Q Consensus 11 ~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~-----~~g~~~iv~~Ll~~ga~in~~~ 84 (1015)
...+|.+|.+|+||||+||+.|+.++|++|+++|+ +++..|..|.||||+|+ ..|+.+++++|++.|++++..+
T Consensus 101 ~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~ 180 (276)
T 4hbd_A 101 DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS 180 (276)
T ss_dssp HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT
T ss_pred hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC
Confidence 34589999999999999999999999999999998 99999999999999999 6789999999999999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHH
Q psy14874 85 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQ 163 (1015)
Q Consensus 85 ~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~ 163 (1015)
..|.||||+|+..|+.++|++|++ .+++++..|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 999999999999999999999995 588999999999999999999999999999999 899999999999999999999
Q ss_pred cCChHHHHHHhhcCC
Q psy14874 164 NNFPEVAQIFLRAHP 178 (1015)
Q Consensus 164 ~g~~~iv~~Ll~~~~ 178 (1015)
.|+.+++++|+++..
T Consensus 260 ~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 260 AGQSEIASMLYSRMN 274 (276)
T ss_dssp HTCHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHhccC
Confidence 999999999998753
No 63
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=2.2e-29 Score=279.79 Aligned_cols=264 Identities=17% Similarity=0.043 Sum_probs=119.5
Q ss_pred cHHHHHHh-cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCcHHHHHHHcC
Q psy14874 23 TPLLIACN-RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI---NSKSRVGRTALHLAAMNG 98 (1015)
Q Consensus 23 t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i---n~~~~~g~t~L~~A~~~g 98 (1015)
+.+++|.. .++.+++++|+++|.+. +||||+|++.|+.++|++|+++|+.. +..+..|.||||+|+.+|
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 34444444 34455555555544332 35555555555555555555555411 112223445555555555
Q ss_pred CHHHHHHHHhccC----ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HcCChHHHH
Q psy14874 99 YADLCRFLVHDHA----AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA--TDDQGQKPIHVAA-QNNFPEVAQ 171 (1015)
Q Consensus 99 ~~eiv~~Ll~~~~----~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~--~d~~~~t~L~~A~-~~g~~~iv~ 171 (1015)
+.++|++|++.+. .+++..+ .||||+|+.+|+.++|++|+++|++++. .|..|.||||+|+ .+|+.++++
T Consensus 140 ~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp CHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred CHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 5555555553321 1122211 4555555555555555555555555444 4445555555555 555555555
Q ss_pred HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccC----CCCC----Cc---------H---HHHH
Q psy14874 172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARN----RVTE----AT---------P---LQLA 231 (1015)
Q Consensus 172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~----~~~~----~t---------~---L~~A 231 (1015)
+|++.+. .|.||+++|+.+|+.+++++|++.+.+....... ...| -+ . +..+
T Consensus 217 ~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~ 288 (376)
T 2aja_A 217 FLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRR 288 (376)
T ss_dssp HHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHc
Confidence 5555321 1455555555555555555555543321110000 0000 00 0 0011
Q ss_pred HHcCCHHHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCC
Q psy14874 232 AEGGHANVVRVLVKA---------GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ 302 (1015)
Q Consensus 232 ~~~g~~~iv~~Ll~~---------ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~ 302 (1015)
...+..+.+++|++. |++++ .+.+||++|++.|+.+++++|++.+ ...+..+.+++..|-..|.
T Consensus 289 ~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~ 361 (376)
T 2aja_A 289 NDEVLLDDIRFLLSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGR 361 (376)
T ss_dssp CCGGGHHHHHHHHTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC------------
T ss_pred chhhHHHHHHHHHhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccccccccc
Confidence 112335666777653 44433 3557999999999999999999865 3455667788999988888
Q ss_pred HHHHHHHHh
Q psy14874 303 ADTVRELLS 311 (1015)
Q Consensus 303 ~~~v~~Ll~ 311 (1015)
.++.+.-+.
T Consensus 362 ~~~~~~~~~ 370 (376)
T 2aja_A 362 LDLRAVALE 370 (376)
T ss_dssp ---------
T ss_pred ccHHHHHHH
Confidence 888776554
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.5e-26 Score=227.99 Aligned_cols=160 Identities=28% Similarity=0.419 Sum_probs=148.3
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA 95 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~ 95 (1015)
.|+.|.||||.|++.|+.++|++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 478899999999999999999999994 5677778889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874 96 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175 (1015)
Q Consensus 96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~ 175 (1015)
..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+. |+.+++++|++
T Consensus 84 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 84 SYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 9999999999995 688899999999999999999999999999999999999999999999999877 89999999998
Q ss_pred cCC
Q psy14874 176 AHP 178 (1015)
Q Consensus 176 ~~~ 178 (1015)
+++
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 754
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=4.9e-26 Score=227.66 Aligned_cols=162 Identities=27% Similarity=0.308 Sum_probs=151.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
+..+.+|||.||+.|+.++|++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 35688999999999999999999998 56899999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||+++|+..++.+++++|++.
T Consensus 82 ~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 82 HGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999995 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q psy14874 177 HPSL 180 (1015)
Q Consensus 177 ~~~~ 180 (1015)
+.+.
T Consensus 161 g~~~ 164 (179)
T 3f6q_A 161 GQNL 164 (179)
T ss_dssp TCCC
T ss_pred hcCc
Confidence 8874
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=6.4e-26 Score=229.79 Aligned_cols=163 Identities=22% Similarity=0.282 Sum_probs=153.5
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHH
Q psy14874 47 VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 126 (1015)
Q Consensus 47 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~ 126 (1015)
+|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHH
Confidence 45688999999999999999999999999999999999999999999999999999999995 57889999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHH
Q psy14874 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE 206 (1015)
Q Consensus 127 ~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~ 206 (1015)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 67788999999999999999999999
Q ss_pred HHhcC
Q psy14874 207 LMKFD 211 (1015)
Q Consensus 207 Ll~~~ 211 (1015)
|++++
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98743
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=7e-26 Score=225.01 Aligned_cols=168 Identities=24% Similarity=0.315 Sum_probs=85.2
Q ss_pred cHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHH
Q psy14874 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452 (1015)
Q Consensus 373 tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~ 452 (1015)
+|||.|+..|+.++++.|++.+...++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 45555555555555555555554444444555555555555555555555555555555555544555555555444444
Q ss_pred HHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHh
Q psy14874 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532 (1015)
Q Consensus 453 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ 532 (1015)
++++|+++|++++.. |..|.||||+|+..|+.+++++|+++|+++
T Consensus 84 ~v~~Ll~~g~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--------- 128 (172)
T 3v30_A 84 IVGLLLERDVDINIY--------------------------DWNGGTPLLYAVRGNHVKCVEALLARGADL--------- 128 (172)
T ss_dssp HHHHHHTTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---------
T ss_pred HHHHHHHcCCCCCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---------
Confidence 444444444444322 344444444444444444444444444444
Q ss_pred hhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy14874 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612 (1015)
Q Consensus 533 ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~ 612 (1015)
+..+..|.||||+|+..|+.+++++|+++|+++..++.
T Consensus 129 ------------------------------------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~ 166 (172)
T 3v30_A 129 ------------------------------------------TTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNL 166 (172)
T ss_dssp ------------------------------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC--
T ss_pred ------------------------------------------cccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccC
Confidence 44455566666666666666666666666666666666
Q ss_pred CCCCH
Q psy14874 613 QGQKP 617 (1015)
Q Consensus 613 ~g~t~ 617 (1015)
.|.||
T Consensus 167 ~~~~p 171 (172)
T 3v30_A 167 VPADP 171 (172)
T ss_dssp -----
T ss_pred CCCCC
Confidence 65554
No 68
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.1e-25 Score=219.45 Aligned_cols=153 Identities=25% Similarity=0.370 Sum_probs=144.0
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 21 GWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 21 g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
|.||||.|++.|+.+++++|+++ +.+++..|..|.||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57999999999999999999998 34889899999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.+++++|++ .+.+++..+..|+||||+|+..|+.+++++|++. ++++..|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999995 6788999999999999999999999999999999 99999999999999999999999999999874
No 69
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.3e-25 Score=220.54 Aligned_cols=158 Identities=26% Similarity=0.377 Sum_probs=144.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874 53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132 (1015)
Q Consensus 53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g 132 (1015)
...||||.|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcC
Confidence 45699999999999999999999999999999999999999999 99999999995 58889999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDR 212 (1015)
Q Consensus 133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~ 212 (1015)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++..+..+..|.||||+|+..|+.+++++|+++++
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999988667778888888888888877777777777554
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.1e-28 Score=256.72 Aligned_cols=191 Identities=23% Similarity=0.200 Sum_probs=163.9
Q ss_pred hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
.+..+.+|.||||.||+.|+.++|++|+++|+++|..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~ 93 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC 93 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 35667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhccCccccccc-cCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHH
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILT-LRKQTPLHLA--AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~A--a~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv 170 (1015)
|+..|+.+++++|+ +.+++++..+ ..|+||||+| +..|+.+++++|++.|++++..|..+.+|++.++..+..
T Consensus 94 A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~--- 169 (229)
T 2vge_A 94 AASCNDTVICMALV-QHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD--- 169 (229)
T ss_dssp HHHTTCHHHHHHHH-TTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTT---
T ss_pred HHHcCCHHHHHHHH-HcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccc---
Confidence 99999999999999 4678888876 6999999999 899999999999999999999999888888865544433
Q ss_pred HHHhhcCCCC-cccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874 171 QIFLRAHPSL-VTATTKDGNTCAHIAAMQGSVGVIEELM 208 (1015)
Q Consensus 171 ~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 208 (1015)
++|++.+.+. +..+|.+|.||||+|+..|+.++++..+
T Consensus 170 ~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 170 ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred ccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 4666666542 4567888888888888888888776543
No 71
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=3.9e-28 Score=269.79 Aligned_cols=286 Identities=15% Similarity=0.111 Sum_probs=193.4
Q ss_pred hcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874 30 NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAE-HGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 108 (1015)
Q Consensus 30 ~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~-~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~ 108 (1015)
..+..+.+..+++.+.+++. ..+.+++++|.. .++.+++++++++|++ ++||||+|+..|+.++|++|++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~ 113 (376)
T 2aja_A 43 TLSYKEAIHIFLPGTKNMEQ--VRQLLCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCL 113 (376)
T ss_dssp HSCHHHHHHHCCCCSSHHHH--HHHHHHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTT
T ss_pred hccHHHHHHHHhcCCCCHHH--HHHHHHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHH
Confidence 35566777777776554432 234568888877 5889999999998864 4599999999999999999996
Q ss_pred ccCcc--ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCccc
Q psy14874 109 DHAAV--IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI---DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA 183 (1015)
Q Consensus 109 ~~~~~--i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~---n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~ 183 (1015)
.+... .+..+..|.||||+|+.+|+.++|++|+++|+++ +..+.+ .||||+|+..|+.+++++|++++++. ..
T Consensus 114 ~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~ 191 (376)
T 2aja_A 114 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-AT 191 (376)
T ss_dssp C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HH
T ss_pred cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-ch
Confidence 54311 1234556789999999999999999999999862 333333 89999999999999999999998873 33
Q ss_pred --CCCCCchHHHHHH-HcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Q psy14874 184 --TTKDGNTCAHIAA-MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260 (1015)
Q Consensus 184 --~~~~g~t~L~~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~ 260 (1015)
.+..|.||||+|+ .+|+.+++++|++.+.. +.|||+.|+..|+.+++++|+++|++++..+. +
T Consensus 192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~ 257 (376)
T 2aja_A 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----A 257 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----T
T ss_pred hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----------cchHHHHHHHCCCHHHHHHHHhcCcccccccH----H
Confidence 6778999999999 99999999999985422 56999999999999999999999987654432 2
Q ss_pred HHHHHHcCC---------------------------HHHHHHHHhCCCccc-----cccccCCCHHHHHHHcCCHHHHHH
Q psy14874 261 VHLAAQNGH---------------------------NQVLEEMRSSKALNV-----YSKKLGVTALHVAAYFGQADTVRE 308 (1015)
Q Consensus 261 L~~A~~~~~---------------------------~~iv~~Ll~~~~~~~-----~~~~~~~t~l~~A~~~~~~~~v~~ 308 (1015)
++.|+.+|+ .+.+++|++...... .....+.++++.|+..|+.++++.
T Consensus 258 l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~l 337 (376)
T 2aja_A 258 FKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACAL 337 (376)
T ss_dssp TTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHH
T ss_pred HHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHH
Confidence 333333333 344555554322111 112234567888888888888888
Q ss_pred HHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHH
Q psy14874 309 LLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL 356 (1015)
Q Consensus 309 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll 356 (1015)
|++.+ ...+..++|++.+|-..|..++.+.-+
T Consensus 338 Ll~~~----------------~v~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
T 2aja_A 338 LLSIP----------------SVLALTKANNYYINETGGRLDLRAVAL 369 (376)
T ss_dssp HTTSH----------------HHHHSCC--------------------
T ss_pred HHcCh----------------HHHHHHHHhccccccccccccHHHHHH
Confidence 87642 112345667777777777776665443
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=5.1e-25 Score=217.90 Aligned_cols=158 Identities=31% Similarity=0.430 Sum_probs=147.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874 51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130 (1015)
Q Consensus 51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~ 130 (1015)
...+.++|+.|++.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK-NGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHH
Confidence 4456789999999999999999999999999999999999999999999999999995 578899999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy14874 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF 210 (1015)
Q Consensus 131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 210 (1015)
.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|+++
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999887 577888899999999999999999988875
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=5.4e-25 Score=217.37 Aligned_cols=158 Identities=23% Similarity=0.317 Sum_probs=147.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874 53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132 (1015)
Q Consensus 53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g 132 (1015)
.|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-NGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcC
Confidence 57899999999999999999999999999999999999999999999999999995 58889999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q psy14874 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDR 212 (1015)
Q Consensus 133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~ 212 (1015)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|+++..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877 57788889999999999999999998887543
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=3.6e-26 Score=240.25 Aligned_cols=180 Identities=18% Similarity=0.216 Sum_probs=129.0
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874 19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG 98 (1015)
Q Consensus 19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g 98 (1015)
..|.||||.|++.|+.++++.|+++|++++. +..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 5799999999999999999999999999984 578899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHH--HHcCChHHHHHHhh
Q psy14874 99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ-KPIHVA--AQNNFPEVAQIFLR 175 (1015)
Q Consensus 99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~-t~L~~A--~~~g~~~iv~~Ll~ 175 (1015)
+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+| +..|+.+++++|++
T Consensus 82 ~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 82 HTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp CHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 9999999995 5889999999999999999999999999999999999999998887 999999 88899999999998
Q ss_pred cCCCCcc--------cCCCCCchHHHHHHHcCC
Q psy14874 176 AHPSLVT--------ATTKDGNTCAHIAAMQGS 200 (1015)
Q Consensus 176 ~~~~~~~--------~~~~~g~t~L~~A~~~g~ 200 (1015)
.+.+... ..+..+.++.+.+...|.
T Consensus 161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 7665211 114445555555555543
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.9e-24 Score=209.86 Aligned_cols=151 Identities=27% Similarity=0.327 Sum_probs=142.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC
Q psy14874 54 GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133 (1015)
Q Consensus 54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~ 133 (1015)
..+||+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+ +.+.+++..+..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 4689999999999999999999999887 5788999999999999999999999 5678899999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHH
Q psy14874 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207 (1015)
Q Consensus 134 ~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L 207 (1015)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999887 677888999999999999999999876
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.7e-27 Score=247.72 Aligned_cols=198 Identities=22% Similarity=0.226 Sum_probs=136.4
Q ss_pred HHHHHhcchh--hcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCc
Q psy14874 388 GLLLSRAADL--LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465 (1015)
Q Consensus 388 ~~Ll~~~~~~--~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 465 (1015)
+.|++++++. .+..+..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 3455555442 12334455667777777777777777777777777777777777777777777777777777777666
Q ss_pred ccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccC-
Q psy14874 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS- 544 (1015)
Q Consensus 466 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~- 544 (1015)
.. |..|.||||+|+..|+.+++++|+++|++++. ++
T Consensus 82 ~~--------------------------d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~-----------------~~~ 118 (229)
T 2vge_A 82 SP--------------------------DSHGWTPLHCAASCNDTVICMALVQHGAAIFA-----------------TTL 118 (229)
T ss_dssp CC--------------------------CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-----------------CCS
T ss_pred CC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-----------------ccC
Confidence 43 56777777777777777777777777777632 33
Q ss_pred CCCCcHHHHH--HHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHH
Q psy14874 545 RVGRTALHLA--AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS--IDATDDQGQKPIHV 620 (1015)
Q Consensus 545 ~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~--~~~~d~~g~t~l~~ 620 (1015)
..|.||||+| +..|+.+++++|++.+. +++..+..|.||++.++..+. .++|++.|++ ++.+|..|+||||+
T Consensus 119 ~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga-~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~ 194 (229)
T 2vge_A 119 SDGATAFEKCDPYREGYADCATYLADVEQ-SMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWW 194 (229)
T ss_dssp STTCCTGGGCCTTSTTHHHHHHHHHHHHH-HTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEE
T ss_pred CCCCCHHHHHHHHhcChHHHHHHHHHcCC-CcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHH
Confidence 4677777777 77777777777776544 346666777777776554442 3677888888 67788889999999
Q ss_pred HHhcCChHHHHH
Q psy14874 621 AAQNNFPEVAQI 632 (1015)
Q Consensus 621 A~~~~~~~~~~~ 632 (1015)
|+.+|+.++|+.
T Consensus 195 A~~~g~~~~v~~ 206 (229)
T 2vge_A 195 AALHGQEGYVPR 206 (229)
T ss_dssp EEETTEEEEEEG
T ss_pred HHHcCCcceeeh
Confidence 999998888764
No 77
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1.6e-24 Score=216.62 Aligned_cols=166 Identities=23% Similarity=0.364 Sum_probs=101.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHhhC-CCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHH
Q psy14874 405 GKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL 483 (1015)
Q Consensus 405 g~t~L~~A~~~g~~~iv~~Ll~~-ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll 483 (1015)
+.++|+.|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---------------- 68 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM---------------- 68 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc----------------
Confidence 44555555555555555555555 4455555555555666655555566666666555555432
Q ss_pred HhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHH
Q psy14874 484 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC 563 (1015)
Q Consensus 484 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 563 (1015)
+..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++
T Consensus 69 ----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v 121 (179)
T 3f6q_A 69 ----------NRGDDTPLHLAASHGHRDIVQKLLQYKADI-----------------NAVNEHGNVPLHYACFWGQDQVA 121 (179)
T ss_dssp ----------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ----------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------CccCCCCCCHHHHHHHcCCHHHH
Confidence 455666666666666666666666666655 33445566666666666666666
Q ss_pred HHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q psy14874 564 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 614 (1015)
Q Consensus 564 ~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g 614 (1015)
++|++.+ .+++..+..|.|||++|+..++.+++++|+++|++++..+..+
T Consensus 122 ~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 122 EDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 6666543 3346666677888888888888888888888888887665443
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=7.4e-25 Score=213.51 Aligned_cols=147 Identities=23% Similarity=0.257 Sum_probs=120.2
Q ss_pred hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc-HH
Q psy14874 13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT-AL 91 (1015)
Q Consensus 13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t-~L 91 (1015)
..+..+..|.||||.|++.|+.++|++|+++|++++..|..|+||||+|+ .|+.+++++|+++|++++.++..|.| ||
T Consensus 4 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 4 AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPV 82 (156)
T ss_dssp ------CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHH
T ss_pred CccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 45678899999999999999999999999999999999999999999995 99999999999999999999999999 99
Q ss_pred HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874 92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 161 (1015)
Q Consensus 92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A 161 (1015)
|+|+..|+.+++++|++ ++++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999995 5889999999999999999999999999999999999999999999987743
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=6.8e-24 Score=206.83 Aligned_cols=153 Identities=25% Similarity=0.349 Sum_probs=142.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874 54 GRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132 (1015)
Q Consensus 54 g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g 132 (1015)
+.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLK-QGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC
Confidence 46899999999999999999998 44899999999999999 99999999999995 58889999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy14874 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF 210 (1015)
Q Consensus 133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 210 (1015)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. . ..+..+..|.||+++|+..|+.+++++|+++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S-DLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S-CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998 4 4678889999999999999999999999863
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=1.3e-24 Score=206.23 Aligned_cols=132 Identities=23% Similarity=0.300 Sum_probs=108.1
Q ss_pred hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCcHH
Q psy14874 13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRV-GRTAL 91 (1015)
Q Consensus 13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~-g~t~L 91 (1015)
.+|.+|..|.||||.|++.|+.++|++|+++|++++..|..|+||||+|+. |+.+++++|+++|++++.++.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 467788888888888888888888888888888888888888888888888 8888888888888888888877 78888
Q ss_pred HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy14874 92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146 (1015)
Q Consensus 92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad 146 (1015)
|+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888888884 5677777777888888888888888888888887775
No 81
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=5.1e-24 Score=209.91 Aligned_cols=159 Identities=25% Similarity=0.290 Sum_probs=142.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874 50 FDQEGRSALHLAAEHGYLKVCDALLT-HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 128 (1015)
Q Consensus 50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A 128 (1015)
.|.+|.||||.|++.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ-HGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHh-cCCCCCccCCCCCCHHHHH
Confidence 46778899999999999999999998 556778888889999999999999999999995 5788999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874 129 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELM 208 (1015)
Q Consensus 129 a~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 208 (1015)
+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ .+..+..|.||+++|+. |+.+++++|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 999999999999999999999999999999999999999999999999876 67788888998888765 8888888887
Q ss_pred hcC
Q psy14874 209 KFD 211 (1015)
Q Consensus 209 ~~~ 211 (1015)
+.+
T Consensus 161 ~~g 163 (165)
T 3twr_A 161 GDA 163 (165)
T ss_dssp TC-
T ss_pred hcc
Confidence 644
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=3.8e-24 Score=213.89 Aligned_cols=154 Identities=15% Similarity=0.134 Sum_probs=139.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874 21 GWTPLLIACNRGHMELVNTMLNNHARVDVFD-QEGRSALHLAAEHGYL----KVCDALLTHKAFINSKSRVGRTALHLAA 95 (1015)
Q Consensus 21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~in~~~~~g~t~L~~A~ 95 (1015)
++++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..|+. +++++|+++|+++|.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 6789999999999999999999764 3455 7799999999999985 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHhccCccccccccCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCcHHHHHH
Q psy14874 96 MNGY------ADLCRFLVHDHAAVIDILTLRKQ-TPLHLAAEAG-----QLQVCKLLLD-LGASIDATDDQGQKPIHVAA 162 (1015)
Q Consensus 96 ~~g~------~eiv~~Ll~~~~~~i~~~~~~g~-t~L~~Aa~~g-----~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~ 162 (1015)
..|+ .+++++|++ .|+++|.+|..|+ ||||+|+..| +.+++++|++ +|++++.+|..|.||||+|+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 9987 678999994 6899999999999 9999999944 4679999999 99999999999999999999
Q ss_pred HcCChHHHHHHhhcC
Q psy14874 163 QNNFPEVAQIFLRAH 177 (1015)
Q Consensus 163 ~~g~~~iv~~Ll~~~ 177 (1015)
+.|+.+++++|.+..
T Consensus 163 ~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 163 RCQKPIALKMMEDYI 177 (186)
T ss_dssp TTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 999999999998754
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.2e-23 Score=197.83 Aligned_cols=134 Identities=25% Similarity=0.356 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccC-CC
Q psy14874 44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQ 122 (1015)
Q Consensus 44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~-g~ 122 (1015)
+++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|++ .+.+++..+.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLL-HGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHH-HTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHH-CCCCCCCcCCCCCC
Confidence 46888999999999999999999999999999999999999999999999999 99999999995 67889999999 99
Q ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 123 t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999998753
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=3.6e-24 Score=224.89 Aligned_cols=160 Identities=20% Similarity=0.247 Sum_probs=110.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874 51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130 (1015)
Q Consensus 51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~ 130 (1015)
+..|.||||.|++.|+.++++.|+++|++++.. ..|.||||.|+..|+.+++++|+ +.+.+++..+..|.||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHH
Confidence 356899999999999999999999999999864 67899999999999999999999 5577899999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc-hHHHHH--HHcCCHHHHHHH
Q psy14874 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN-TCAHIA--AMQGSVGVIEEL 207 (1015)
Q Consensus 131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~-t~L~~A--~~~g~~~iv~~L 207 (1015)
.|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|++++.+. +..+..|. ||+|+| +..|+.+++++|
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 99999999999999999999999999999999999999999999998874 55555554 888877 666777777777
Q ss_pred HhcCCc
Q psy14874 208 MKFDRS 213 (1015)
Q Consensus 208 l~~~~~ 213 (1015)
++.+.+
T Consensus 159 l~~~a~ 164 (239)
T 1ycs_B 159 YGVQEK 164 (239)
T ss_dssp HHHHHH
T ss_pred HHhhhc
Confidence 765444
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-22 Score=190.20 Aligned_cols=126 Identities=44% Similarity=0.655 Sum_probs=116.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
+|+||||.|++.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy14874 100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146 (1015)
Q Consensus 100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad 146 (1015)
.+++++|++ .+.+++..+..|.|||++|+..|+.+++++|+++|||
T Consensus 81 ~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999994 5778888888999999999999999999999998886
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=1.3e-22 Score=192.49 Aligned_cols=127 Identities=28% Similarity=0.377 Sum_probs=97.0
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
....|.||||.||+.|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 34567788888888888888888888888888778888888888888888888888888888888777777777777777
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 144 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g 144 (1015)
.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 777777777774 46667777777777777777777777777777765
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.6e-22 Score=196.92 Aligned_cols=143 Identities=24% Similarity=0.276 Sum_probs=120.1
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC-HHH
Q psy14874 48 DVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT-PLH 126 (1015)
Q Consensus 48 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t-~L~ 126 (1015)
+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+ .|+.+++++|++ .+.+++..+..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~-~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLL-HGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHT-TTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHH-cCCCCCCcCCCCCcHHHH
Confidence 346788999999999999999999999999999999999999999986 999999999994 68899999999999 999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHH
Q psy14874 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193 (1015)
Q Consensus 127 ~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~ 193 (1015)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ .+..+..|.|+.+
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG-TRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-CCccCcCcCcccc
Confidence 99999999999999999999999999999999999999999999999999887 5777888888765
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1e-21 Score=186.21 Aligned_cols=127 Identities=28% Similarity=0.388 Sum_probs=119.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHH
Q psy14874 50 FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129 (1015)
Q Consensus 50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa 129 (1015)
....+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK-NGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHH
Confidence 35567899999999999999999999999999999999999999999999999999995 58889999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874 130 EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177 (1015)
Q Consensus 130 ~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~ 177 (1015)
..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999998864
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=3.6e-21 Score=179.78 Aligned_cols=126 Identities=44% Similarity=0.672 Sum_probs=119.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874 53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132 (1015)
Q Consensus 53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g 132 (1015)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcC
Confidence 58999999999999999999999999999999999999999999999999999995 57888999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++++++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999998763
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=6.3e-22 Score=197.78 Aligned_cols=154 Identities=15% Similarity=0.150 Sum_probs=127.9
Q ss_pred CccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCH----HHHHHHhhCCCCcccCCCCCCCHHHHHH
Q psy14874 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL----QMVEVLLGQGAEINATDKGGARSIHTAA 446 (1015)
Q Consensus 371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~i~~~~~~g~t~L~~A~ 446 (1015)
++++|+.|++.|+.+.++.++..+... ..+..|+||||+|+..|+. +++++|+++|+++|.+|..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 457888888888888888888766442 2236789999999998875 5899999999999999999999999999
Q ss_pred HhCC------HHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCC-cHHHHHHHcC-----CHHHHH
Q psy14874 447 RYGH------VGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGK-TCLHIAATHG-----HLQMVE 514 (1015)
Q Consensus 447 ~~g~------~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~-t~L~~A~~~g-----~~~~v~ 514 (1015)
..|+ .+++++|+++|++++.. |..|. ||||+|+..+ +.++++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~--------------------------d~~g~ttpLh~A~~~~~~~~~~~~iv~ 137 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITAL--------------------------YKPYKIVVFKNIFNYFVDENEMIPLYK 137 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSC--------------------------BGGGTBCTTGGGGGCCSCHHHHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCcc--------------------------CCCcCchHHHHHHHcCCChhhHHHHHH
Confidence 9887 57899999999988865 67888 9999999844 467999
Q ss_pred HHHh-cCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhc
Q psy14874 515 VLLG-QGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHD 569 (1015)
Q Consensus 515 ~Ll~-~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 569 (1015)
+|++ +|+++ +.++..|+||||+|+..|+.++|++|.+.
T Consensus 138 ~Ll~~~gad~-----------------~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 138 LIFSQSGLQL-----------------LIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHTSTTCCT-----------------TCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHhcCCCC-----------------cccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 9999 89988 55677888999999888888888888754
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=4.9e-22 Score=188.77 Aligned_cols=125 Identities=30% Similarity=0.390 Sum_probs=67.1
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
+|..|+||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 45555556666655555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~ 142 (1015)
.|+.+++++|++ .+++++..+..|.|||++|+..+..+++++|.+
T Consensus 86 ~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 86 NGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred cCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 555555555552 344444445555555555554444444444443
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=9e-22 Score=197.24 Aligned_cols=140 Identities=26% Similarity=0.285 Sum_probs=115.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~ 96 (1015)
++.|+||||.|++.|+.+++++|++ |+++|..|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4678899999999999999999998 88888889999999999999999999999999999988887 778888888888
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.|+.+++++|++ .+++++..+..|+||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 120 ~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVE-LGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 888888888884 4677888888888888888774432 2346788888888888888887653
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=1.2e-22 Score=203.54 Aligned_cols=162 Identities=21% Similarity=0.186 Sum_probs=134.9
Q ss_pred HHhcCCHHHHHHHHhCCCCCC-----------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874 28 ACNRGHMELVNTMLNNHARVD-----------VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM 96 (1015)
Q Consensus 28 A~~~g~~~iv~~Ll~~g~~~~-----------~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~ 96 (1015)
|++.|..+.+++|++.+.... ..+.+|.||||+|+..|+.+++++|++ |++++.++..|.||||+|+.
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~ 85 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAG 85 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHH
Confidence 344555556666664332211 124578999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHhccCccccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874 97 NGYADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~ 175 (1015)
.|+.+++++|++ .+.+++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++.
T Consensus 86 ~~~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-------- 156 (183)
T 3deo_A 86 LGSDKCVRLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------- 156 (183)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT--------
T ss_pred cCCHHHHHHHHH-cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC--------
Confidence 999999999995 578888888 8899999999999999999999999999999999999999999875432
Q ss_pred cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy14874 176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK 209 (1015)
Q Consensus 176 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 209 (1015)
..+.+++++|+..|+.++++.|.+
T Consensus 157 ----------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 157 ----------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp ----------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ----------cccccHHHHHHHcCHHHHHHHHHH
Confidence 345678888888888888888765
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=6.4e-22 Score=187.95 Aligned_cols=133 Identities=26% Similarity=0.403 Sum_probs=119.8
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC
Q psy14874 44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 123 (1015)
Q Consensus 44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t 123 (1015)
|+++ .+|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCC
Confidence 5667 589999999999999999999999999999999999999999999999999999999995 68889999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCC
Q psy14874 124 PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 178 (1015)
Q Consensus 124 ~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~ 178 (1015)
|||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+...
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999998887766543
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=8.4e-23 Score=214.90 Aligned_cols=168 Identities=25% Similarity=0.211 Sum_probs=114.5
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874 19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG 98 (1015)
Q Consensus 19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g 98 (1015)
..|.+++..|+..|+.+.+..+...+.++ +.+|.||||+|+..|+.+++++|++ |+++|.++..|.||||+|+..|
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g 88 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLG 88 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHT
T ss_pred CCCccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCC
Confidence 44556666666666666555554444333 2456777777777777777777777 7777777777777777777777
Q ss_pred CHHHHHHHHhccCccccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874 99 YADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177 (1015)
Q Consensus 99 ~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~ 177 (1015)
+.++|++|++ .+++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+.
T Consensus 89 ~~~~v~~Ll~-~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~----------- 156 (244)
T 3ui2_A 89 SDKCVRLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK----------- 156 (244)
T ss_dssp CHHHHHHHHH-TTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------
T ss_pred CHHHHHHHHH-cCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------
Confidence 7777777773 466666666 667777777777777777777777777777777777777777775221
Q ss_pred CCCcccCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy14874 178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMK 209 (1015)
Q Consensus 178 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 209 (1015)
...+.+|+++|+..|+.++++.|.+
T Consensus 157 -------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 157 -------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp -------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 1345566666666666666666665
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.4e-21 Score=205.64 Aligned_cols=141 Identities=26% Similarity=0.282 Sum_probs=130.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAM 96 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~ 96 (1015)
++.|.||||.||+.|+.++|++|++ |+++|..|..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4679999999999999999999999 99999999999999999999999999999999999999988 889999999999
Q ss_pred cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874 97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176 (1015)
Q Consensus 97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~ 176 (1015)
.|+.+++++|++ .+++++..+..|.||||+|+..++ ...+.|||++|+..|+.+++++|.++
T Consensus 121 ~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 121 YVRPEVVEALVE-LGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 999999999995 588999999999999999997332 24578999999999999999999985
Q ss_pred C
Q psy14874 177 H 177 (1015)
Q Consensus 177 ~ 177 (1015)
.
T Consensus 183 ~ 183 (244)
T 3ui2_A 183 V 183 (244)
T ss_dssp H
T ss_pred c
Confidence 3
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=7.4e-22 Score=204.86 Aligned_cols=141 Identities=26% Similarity=0.379 Sum_probs=114.8
Q ss_pred hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHH
Q psy14874 13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTAL 91 (1015)
Q Consensus 13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L 91 (1015)
.++.++..|.||||.||+.|+.++|++|+++|++++..|..|+||||+|+..|+.+++++|+++ |++++.++..|.|||
T Consensus 65 ~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred hccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 4566778899999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy14874 92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 154 (1015)
Q Consensus 92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~ 154 (1015)
|+|+..|+.+++++|++ .+++++..+..|.|||++|+..|+.++++.|++.|++.+..+.++
T Consensus 145 ~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999995 488889999999999999999999999999999998877665543
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=4.4e-21 Score=178.29 Aligned_cols=111 Identities=23% Similarity=0.244 Sum_probs=78.2
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN 97 (1015)
Q Consensus 18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~ 97 (1015)
++.|.||||.|++.|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 46677777777777777777777777777777777777777777777777777777777777777776677777666666
Q ss_pred CCHHHHHHHHhccCccccccccCCCCHHHHHH
Q psy14874 98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129 (1015)
Q Consensus 98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa 129 (1015)
|+.+++++|++ .+++++..+..|.||||+|+
T Consensus 84 ~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 84 GHVSCVKLLLS-KGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC
T ss_pred CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC
Confidence 66666666663 35556666666666666663
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=7e-21 Score=206.13 Aligned_cols=139 Identities=19% Similarity=0.165 Sum_probs=97.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhccCccccccccCCCCH
Q psy14874 54 GRSALHLAAEHGYLKVCDALLTHKAFINS------KSRVGRTALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTP 124 (1015)
Q Consensus 54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~------~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~ 124 (1015)
..++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.+++++|++ .+++++..|..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~-~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH-HSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh-cCCCCCCCCCCCCCH
Confidence 34567777777777777777777777776 466777777777776 67777777774 466777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCC
Q psy14874 125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200 (1015)
Q Consensus 125 L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 200 (1015)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ .|.||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 7777777777777777777777777777777777777777777777777776553 46677777777665
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=2.2e-20 Score=173.52 Aligned_cols=115 Identities=23% Similarity=0.278 Sum_probs=105.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874 51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130 (1015)
Q Consensus 51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~ 130 (1015)
+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+ +.+.+++..+..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999 5688899999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF 166 (1015)
Q Consensus 131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~ 166 (1015)
.|+.+++++|+++|++++.+|..|.||+|+|...+.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 999999999999999999999999999999954333
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=3.2e-20 Score=192.47 Aligned_cols=163 Identities=21% Similarity=0.205 Sum_probs=131.9
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCC---------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNHA---------------RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN 81 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~---------------~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in 81 (1015)
.+..++++.+++++.|+...+..+.+.+. -++..+.+|.||||+|+..|+.+++++|++.|++++
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 100 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVN 100 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCcc
Confidence 34556666666666666543322221110 011235567899999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874 82 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 161 (1015)
Q Consensus 82 ~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A 161 (1015)
.++..|.||||+|+..|+.++|++|++..+.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 180 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh
Confidence 99999999999999999999999999766899999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHhhcCCC
Q psy14874 162 AQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 162 ~~~g~~~iv~~Ll~~~~~ 179 (1015)
+..|+.++++.|++.+..
T Consensus 181 ~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 181 TNAACASLLKKKQGTDAV 198 (222)
T ss_dssp CSHHHHHHHC--------
T ss_pred cchhHHHHHHHHhccchh
Confidence 999999999999987765
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=196.68 Aligned_cols=140 Identities=21% Similarity=0.205 Sum_probs=116.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhccCccccc------cccCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874 87 GRTALHLAAMNGYADLCRFLVHDHAAVIDI------LTLRKQTPLHLAAEA---GQLQVCKLLLDLGASIDATDDQGQKP 157 (1015)
Q Consensus 87 g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~------~~~~g~t~L~~Aa~~---g~~~ivk~Ll~~gad~n~~d~~~~t~ 157 (1015)
+.++|+.|+..|+.+.++.|+ ..+.+++. .+..|.||||+|+.. |+.+++++|+++|+++|.+|..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 457899999999999999998 45667776 588899999999987 88999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH
Q psy14874 158 IHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237 (1015)
Q Consensus 158 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~ 237 (1015)
||+|+..|+.+++++|++++++ ++..|.+|.|||++|+..|+.+++++|++.+.+ .+.||||+|++.|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCCc
Confidence 9999999999999999998877 678889999999999999999999999987665 367999999988864
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=4.7e-19 Score=206.76 Aligned_cols=126 Identities=22% Similarity=0.243 Sum_probs=84.5
Q ss_pred cHHHHHHhcCCHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874 23 TPLLIACNRGHMELVNTMLNNHARVDVF------DQEGRSALHLAAE---HGYLKVCDALLTHKAFINSKSRVGRTALHL 93 (1015)
Q Consensus 23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~------d~~g~t~L~~A~~---~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~ 93 (1015)
+.||.|+..|+.+.|+.|+++|+++|.. |..|.||||+|+. .|+.++|++|+++|+++|.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5577777777777777777777766655 6666777777754 666777777777777777777777777777
Q ss_pred HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy14874 94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 149 (1015)
Q Consensus 94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~ 149 (1015)
|+..|+.++|++|+ +++++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 214 A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 214 AALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HTTTTCHHHHHHHH-HTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 77777777777777 34666666677777777777777777777777777776654
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=7.6e-19 Score=153.86 Aligned_cols=90 Identities=43% Similarity=0.657 Sum_probs=78.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874 20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 99 (1015)
Q Consensus 20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~ 99 (1015)
+|+||||+|++.|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48899999999999999999999999998888899999999999999999999999999888888888888888888888
Q ss_pred HHHHHHHHhc
Q psy14874 100 ADLCRFLVHD 109 (1015)
Q Consensus 100 ~eiv~~Ll~~ 109 (1015)
.+++++|++.
T Consensus 81 ~~~~~~Ll~~ 90 (93)
T 1n0q_A 81 LEVVKLLLEA 90 (93)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888888853
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=6.3e-19 Score=194.85 Aligned_cols=123 Identities=23% Similarity=0.285 Sum_probs=65.4
Q ss_pred CCcHHHHHHhc-CCHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874 21 GWTPLLIACNR-GHMELVNTMLNNHARVDVFD--QEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN 97 (1015)
Q Consensus 21 g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~ 97 (1015)
+.|+||.|+.. |++++|++|+++|+++|..+ ..|.||||+|+..|+.++|++|+++|+++|..|..|.||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34455555555 55555555555555555544 4555555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy14874 98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 144 (1015)
Q Consensus 98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g 144 (1015)
|+.+++++|++ ++++++..|..|.||||+|+..|+.+++++|++.|
T Consensus 279 g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 279 GHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 55555555552 34445555555555555555555555555555443
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=8e-18 Score=179.93 Aligned_cols=162 Identities=22% Similarity=0.225 Sum_probs=95.1
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCC--CCC-----------------------------CCCcHHHHHHHcC
Q psy14874 17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDV--FDQ-----------------------------EGRSALHLAAEHG 65 (1015)
Q Consensus 17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~d~-----------------------------~g~t~L~~A~~~g 65 (1015)
.|.-+.++|+.+...|+....+++...-..... .+. ...++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 577888999999999998877776543211110 000 0123556666666
Q ss_pred CHHHHHHHHhCCCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHH
Q psy14874 66 YLKVCDALLTHKAFI------NSKSRVGRTALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV 136 (1015)
Q Consensus 66 ~~~iv~~Ll~~ga~i------n~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~i 136 (1015)
+.+.++.+++.|+++ +..+..|.||||+|+.. |+.+++++|++ .++++|..|..|+||||+|+..|+.++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~-~ga~in~~d~~g~TpLh~A~~~g~~~~ 220 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTDNAEC 220 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-HCSCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 666666666666552 23345566666666665 55666666663 355555566666666666666666666
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 137 vk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
+++|+++|++++.+|..|.||||+|+..|+.+++++|+++++.
T Consensus 221 v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 221 LKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6666666666666666666666666666666666666655443
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=2.3e-18 Score=184.11 Aligned_cols=125 Identities=21% Similarity=0.240 Sum_probs=118.1
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy14874 22 WTPLLIACNRGHMELVNTMLNNHARVD------VFDQEGRSALHLAAEH---GYLKVCDALLTHKAFINSKSRVGRTALH 92 (1015)
Q Consensus 22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~------~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~~~~g~t~L~ 92 (1015)
.++|+.|++.|+.+.++.+++.|++++ ..|..|+||||+|+.. |+.+++++|+++|+++|.+|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 468999999999999999999999854 4488999999999999 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy14874 93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 147 (1015)
Q Consensus 93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~ 147 (1015)
+|+..|+.++|++|++ ++++++..|..|.||||+|+..|+.+++++|+++|++.
T Consensus 211 ~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999995 78999999999999999999999999999999999864
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=1.2e-18 Score=159.55 Aligned_cols=108 Identities=31% Similarity=0.421 Sum_probs=89.0
Q ss_pred cCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874 16 KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA 95 (1015)
Q Consensus 16 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~ 95 (1015)
.+|.+|+||||.||..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 36788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCCHHHHHHHHhccCccccccccCCCCH
Q psy14874 96 MNGYADLCRFLVHDHAAVIDILTLRKQTP 124 (1015)
Q Consensus 96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~ 124 (1015)
..|+.+++++|+ +.++++|..+..|.+|
T Consensus 84 ~~~~~~~~~~Ll-~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLD-AKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHH-TTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHH-HcCCCCCcCCcccccc
Confidence 888888888888 4577777777777766
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=3.7e-18 Score=149.47 Aligned_cols=93 Identities=46% Similarity=0.668 Sum_probs=79.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874 53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132 (1015)
Q Consensus 53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g 132 (1015)
+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+++++..+..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC
Confidence 47889999999999999999999999888888888888888888888888888884 57778888888888888888888
Q ss_pred CHHHHHHHHHCCCC
Q psy14874 133 QLQVCKLLLDLGAS 146 (1015)
Q Consensus 133 ~~~ivk~Ll~~gad 146 (1015)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 88888888888875
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=4.6e-18 Score=187.92 Aligned_cols=128 Identities=23% Similarity=0.302 Sum_probs=118.7
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHH
Q psy14874 51 DQEGRSALHLAAEH-GYLKVCDALLTHKAFINSKS--RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHL 127 (1015)
Q Consensus 51 d~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~in~~~--~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~ 127 (1015)
+..+.|+||.|+.. |+.++++.|+++|+++|..+ ..|.||||+|+..|+.+++++|++ +++++|..+..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQ-NGANVNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHH
Confidence 44556899999999 99999999999999999988 889999999999999999999995 588999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874 128 AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179 (1015)
Q Consensus 128 Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~ 179 (1015)
|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+..
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999987543
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=1.3e-17 Score=194.62 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=118.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHhccCccccccccCCCCH
Q psy14874 54 GRSALHLAAEHGYLKVCDALLTHKAFINSK------SRVGRTALHLAAM---NGYADLCRFLVHDHAAVIDILTLRKQTP 124 (1015)
Q Consensus 54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~------~~~g~t~L~~A~~---~g~~eiv~~Ll~~~~~~i~~~~~~g~t~ 124 (1015)
..+.||.|+..|+.++++.|+++|+++|.. +..|.||||+||. .|+.++|++|++ .++++|..|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~-~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH-HSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH-cCCCCCccCCCCCcH
Confidence 347899999999999999999999999987 8899999999977 999999999995 688999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHH
Q psy14874 125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAA 196 (1015)
Q Consensus 125 L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~ 196 (1015)
||+|+..|+.+++++|+++||+++.+|..|.||||+|+..|+.+++++|++++++. ..+|+|.+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-------~~~~~h~~~ 275 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT-------FAFPLHVDY 275 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-------CCCcceeec
Confidence 99999999999999999999999999999999999999999999999999998873 225777654
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=4.5e-18 Score=155.72 Aligned_cols=108 Identities=32% Similarity=0.444 Sum_probs=100.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874 49 VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 128 (1015)
Q Consensus 49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A 128 (1015)
.+|.+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHH
Confidence 368899999999999999999999999999999999999999999999999999999994 5888999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874 129 AEAGQLQVCKLLLDLGASIDATDDQGQKP 157 (1015)
Q Consensus 129 a~~g~~~ivk~Ll~~gad~n~~d~~~~t~ 157 (1015)
+..|+.+++++|+++|+++|.++..+.+|
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 99999999999999999999999888876
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=7e-17 Score=146.20 Aligned_cols=97 Identities=31% Similarity=0.384 Sum_probs=84.7
Q ss_pred hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874 10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT 89 (1015)
Q Consensus 10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t 89 (1015)
.....+..|++|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT 92 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q psy14874 90 ALHLAAMNGYADLCRFL 106 (1015)
Q Consensus 90 ~L~~A~~~g~~eiv~~L 106 (1015)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999986
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.58 E-value=4.7e-15 Score=134.09 Aligned_cols=91 Identities=23% Similarity=0.306 Sum_probs=64.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874 49 VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 128 (1015)
Q Consensus 49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A 128 (1015)
..|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+++++..+..|.||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHHHH
Confidence 356777788888888888888888888777777777777777777777777777777774 3566666666777777777
Q ss_pred HHcCCHHHHHHH
Q psy14874 129 AEAGQLQVCKLL 140 (1015)
Q Consensus 129 a~~g~~~ivk~L 140 (1015)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 777777776665
No 115
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=65.44 E-value=1.8 Score=45.11 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHhhhhhhhhh
Q psy14874 796 WYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLE 843 (1015)
Q Consensus 796 ~~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~wn~~~~~~~~~~~~~ 843 (1015)
+.+++-++.++-+.+|.+...+..| ++|+++.||++|++.+...++.
T Consensus 62 ~l~~~e~~~~~iF~~E~~lrl~~~~-~~y~~~~wn~~Dl~~v~~~~i~ 108 (285)
T 3rvy_A 62 YTTLFNQIVITIFTIEIILRIYVHR-ISFFKDPWSLFDFFVVAISLVP 108 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTG-GGGGGCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-HHHHcCChHHhHHHHHHHHHHc
Confidence 4555556666667777777777666 7899999999999887666554
No 116
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=49.37 E-value=7.2 Score=38.90 Aligned_cols=48 Identities=13% Similarity=-0.043 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCCCC-CchHHHHHHHHHHHhhhhhhhhh
Q psy14874 796 WYEWTLLVWLSGLLLFELTNPSDKS-GLGWVKLAVLLFGIFGVALHLLE 843 (1015)
Q Consensus 796 ~~e~~~~~~v~gl~~~e~~~~~~~~-~~~~~~~~wn~~~~~~~~~~~~~ 843 (1015)
+.+++-++++.-+..|-+...+..+ .++|+++.||++|++.+...+..
T Consensus 43 ~l~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~~v~~~~i~ 91 (229)
T 4dxw_A 43 TIHLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTVIVAISLIP 91 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHHHHHHHHhh
Confidence 4445555555556666666666654 58999999999999887665543
No 117
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=34.59 E-value=14 Score=41.80 Aligned_cols=50 Identities=6% Similarity=-0.049 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCC-CchHHHHHHHHHHHhhhhhhhhhhhh
Q psy14874 797 YEWTLLVWLSGLLLFELTNPSDKS-GLGWVKLAVLLFGIFGVALHLLEYTF 846 (1015)
Q Consensus 797 ~e~~~~~~v~gl~~~e~~~~~~~~-~~~~~~~~wn~~~~~~~~~~~~~~~~ 846 (1015)
+.++-++.++-+.+|-+...+..+ .+.|++..||++|++++.-+++.+.+
T Consensus 241 l~~ie~i~~~iFtiE~ilR~~~~~~k~~Y~ks~wniiDli~iip~~i~l~~ 291 (514)
T 2r9r_B 241 FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFL 291 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCSSSSTTSHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHhchhHHHHHHHHHHHHHHHHh
Confidence 333333444444444444443333 35899999999999999877766654
No 118
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=30.84 E-value=6.1 Score=35.42 Aligned_cols=42 Identities=19% Similarity=0.041 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhhcCCCC-CCCchHHHHHHHHHHHhhhhhhhhhhh
Q psy14874 802 LVWLSGLLLFELTNPSD-KSGLGWVKLAVLLFGIFGVALHLLEYT 845 (1015)
Q Consensus 802 ~~~v~gl~~~e~~~~~~-~~~~~~~~~~wn~~~~~~~~~~~~~~~ 845 (1015)
++.+.-+..|-+...+. .+.++|++ ||++|++++.-+..++.
T Consensus 44 ~~~~~iFt~E~~lRl~~~~~~~~y~~--~niiDllailp~~~~~~ 86 (132)
T 1ors_C 44 LILVIILWADYAYRAYKSGDPAGYVK--KTLYEIPALVPAGLLAL 86 (132)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTTTTT--TCGGGTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 33333334443333332 34567888 99999888766655543
No 119
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=22.54 E-value=81 Score=35.49 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=38.6
Q ss_pred HHHHHhcCCHH----HHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-C-------------HHHHHHHHhCCCCCCCCCCC
Q psy14874 25 LLIACNRGHME----LVNTMLNNHARVDVFDQEGRSALHLAAEHG-Y-------------LKVCDALLTHKAFINSKSRV 86 (1015)
Q Consensus 25 L~~A~~~g~~~----iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~-------------~~iv~~Ll~~ga~in~~~~~ 86 (1015)
|...|+.|+++ +.+.+.+.|..+|... .+.|..|+..+ . .++.+.+.+.|..+|...
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t-- 107 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT-- 107 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH--
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH--
Confidence 45556778764 4444555676655332 34444444321 1 244555556665444322
Q ss_pred CCcHHHHHHHcCCHHHHHHHH
Q psy14874 87 GRTALHLAAMNGYADLCRFLV 107 (1015)
Q Consensus 87 g~t~L~~A~~~g~~eiv~~Ll 107 (1015)
-.+.+...+..|+.+-+..++
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~ 128 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMV 128 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHH
Confidence 123344555666665554444
No 120
>3r46_A Coiled coil helix L24D; coiled coil domain, parallel hexamer, KIH interactions, HYDR channel, synthetic biology, de novo protein; 1.75A {Synthetic} PDB: 3r48_A 3r47_A 3r3k_A* 3r48_B 3r4a_A
Probab=20.09 E-value=1.1e+02 Score=18.74 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=13.1
Q ss_pred hHHHHHhhhhHHHHHHHHHhcc
Q psy14874 912 DLIAAGKHCEGMATELLALAAG 933 (1015)
Q Consensus 912 ~~~~~~~~~~~~~~~l~~~~~~ 933 (1015)
+|.++++..+..|.||-++|+.
T Consensus 3 elkaiaqelkaiakelkaiawe 24 (35)
T 3r46_A 3 ELKAIAQELKAIAKELKAIAWE 24 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhh
Confidence 4555566666666666666553
Done!