Query psy14876
Match_columns 121
No_of_seqs 104 out of 169
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 23:04:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14876.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14876hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g1pa_ g.3.6.1 (A:) Conotoxin 42.2 5.9 0.00043 20.3 1.5 11 22-32 14-24 (32)
2 d1xj1a_ g.3.6.5 (A:) Vhv1.1, p 29.4 9.8 0.00071 21.2 1.2 18 52-69 2-19 (47)
3 d1mpza_ g.20.1.1 (A:) Obtustat 25.2 25 0.0018 18.9 2.4 9 24-32 2-10 (41)
4 d1fu3a_ g.3.6.1 (A:) Conotoxin 17.7 23 0.0017 17.3 1.1 9 23-31 11-19 (27)
5 d1l6ja5 g.14.1.2 (A:332-390) G 14.5 26 0.0019 20.1 0.9 21 72-100 3-23 (59)
6 d1jxca_ g.3.7.5 (A:) Trypsin/c 13.9 24 0.0018 21.0 0.6 10 52-61 11-20 (68)
7 d2diga1 b.34.9.1 (A:8-62) Lami 12.6 75 0.0054 18.0 2.5 16 6-21 20-35 (55)
8 d1e88a1 g.14.1.2 (A:42-101) Fi 11.7 43 0.0032 19.1 1.3 21 72-100 2-22 (60)
9 d2b7ka1 c.47.1.10 (A:111-279) 10.9 53 0.0039 19.5 1.6 27 74-101 3-37 (169)
10 d1q3ja_ g.3.4.2 (A:) Antifunga 9.6 52 0.0038 16.9 1.0 9 24-32 13-21 (36)
No 1
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=42.23 E-value=5.9 Score=20.35 Aligned_cols=11 Identities=45% Similarity=1.210 Sum_probs=8.3
Q ss_pred CCCCCCCCCCC
Q psy14876 22 ELASGICCGGL 32 (121)
Q Consensus 22 ~l~~G~CC~g~ 32 (121)
.+.+|-||+|.
T Consensus 14 ilknglccsga 24 (32)
T d1g1pa_ 14 ILKNGLCCSGA 24 (32)
T ss_dssp SSSCCCBTTBC
T ss_pred hhcCCccccCc
Confidence 56789999754
No 2
>d1xj1a_ g.3.6.5 (A:) Vhv1.1, polydnaviral gene product {Campoletis sonorensis virus, CsIV [TaxId: 10484]}
Probab=29.45 E-value=9.8 Score=21.24 Aligned_cols=18 Identities=33% Similarity=0.811 Sum_probs=15.5
Q ss_pred cccccccccCCCCCCccC
Q psy14876 52 CLKEYQSNVTSNGPCSFG 69 (121)
Q Consensus 52 CLK~yq~~v~~~gpCtfG 69 (121)
|+-|||.-|++.-||-.-
T Consensus 2 CI~~Y~~CVNs~~PCC~~ 19 (47)
T d1xj1a_ 2 CIGHYQKCVNADKPCCSK 19 (47)
T ss_dssp CCCSSEECSSSSCCCCCE
T ss_pred ccccHHHHhcCCCCcccc
Confidence 889999999999998643
No 3
>d1mpza_ g.20.1.1 (A:) Obtustatin {Blunt-nosed viper (Vipera lebetina obtusa) [TaxId: 209528]}
Probab=25.18 E-value=25 Score=18.94 Aligned_cols=9 Identities=33% Similarity=0.947 Sum_probs=6.1
Q ss_pred CCCCCCCCC
Q psy14876 24 ASGICCGGL 32 (121)
Q Consensus 24 ~~G~CC~g~ 32 (121)
+.|.||+.=
T Consensus 2 a~G~CC~~C 10 (41)
T d1mpza_ 2 TTGPCCRQC 10 (41)
T ss_dssp CSSSCBTTT
T ss_pred CCCccCCCC
Confidence 468898753
No 4
>d1fu3a_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VIa [TaxId: 6494]}
Probab=17.70 E-value=23 Score=17.34 Aligned_cols=9 Identities=44% Similarity=1.080 Sum_probs=6.4
Q ss_pred CCCCCCCCC
Q psy14876 23 LASGICCGG 31 (121)
Q Consensus 23 l~~G~CC~g 31 (121)
+++-+||||
T Consensus 11 ~ldqnccdg 19 (27)
T d1fu3a_ 11 LLDQNCCDG 19 (27)
T ss_dssp SSSCCBSSS
T ss_pred hhhcccCCc
Confidence 467788875
No 5
>d1l6ja5 g.14.1.2 (A:332-390) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.49 E-value=26 Score=20.12 Aligned_cols=21 Identities=52% Similarity=0.743 Sum_probs=14.1
Q ss_pred cCCCccCCcccccCCCCCCCcEEeeeccc
Q psy14876 72 SSPVLGGNSFTLTDPDRANGNLVLPFTFR 100 (121)
Q Consensus 72 ~TpvLG~nsf~~~~~~~~~~pI~iPF~F~ 100 (121)
.|-++|||+.- -+=+|||.|.
T Consensus 3 ~~~t~GGns~G--------~~C~FPF~Y~ 23 (59)
T d1l6ja5 3 DSTVMGGNSAG--------ELCVFPFTFL 23 (59)
T ss_dssp GGBCBSTTTTT--------CBCCSSEEET
T ss_pred cceEecCCCCC--------CccCCCEEEC
Confidence 45678998631 3677888764
No 6
>d1jxca_ g.3.7.5 (A:) Trypsin/chymotrypsin inhibitor ATT {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=13.92 E-value=24 Score=21.02 Aligned_cols=10 Identities=60% Similarity=1.132 Sum_probs=8.4
Q ss_pred cccccccccC
Q psy14876 52 CLKEYQSNVT 61 (121)
Q Consensus 52 CLK~yq~~v~ 61 (121)
|||+|-..|.
T Consensus 11 ClkeYGgdvg 20 (68)
T d1jxca_ 11 CLKEYGGDVG 20 (68)
T ss_dssp CCCBCCSSCS
T ss_pred HHHHhCCCCC
Confidence 9999987764
No 7
>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.63 E-value=75 Score=17.98 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=12.6
Q ss_pred eeEEEEEEEEEecCCC
Q psy14876 6 SGFFELQILEIANYKG 21 (121)
Q Consensus 6 sG~FELqL~sf~N~~G 21 (121)
+=+||.||+||.+...
T Consensus 20 sLyyev~vls~d~~~~ 35 (55)
T d2diga1 20 SLYYEVEILSHDSTSQ 35 (55)
T ss_dssp CCEEEEEEEEEETTTT
T ss_pred ceEEEEEEEeecCcce
Confidence 4579999999988543
No 8
>d1e88a1 g.14.1.2 (A:42-101) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.70 E-value=43 Score=19.10 Aligned_cols=21 Identities=43% Similarity=0.667 Sum_probs=14.0
Q ss_pred cCCCccCCcccccCCCCCCCcEEeeeccc
Q psy14876 72 SSPVLGGNSFTLTDPDRANGNLVLPFTFR 100 (121)
Q Consensus 72 ~TpvLG~nsf~~~~~~~~~~pI~iPF~F~ 100 (121)
+|..+|||+.- -+=+|||.+.
T Consensus 2 v~~t~gGns~G--------~~C~FPF~y~ 22 (60)
T d1e88a1 2 VTQTYGGNSNG--------EPCVLPFTYN 22 (60)
T ss_dssp CCCCBSGGGTS--------CCCCSSEEET
T ss_pred ccEeeccCCCc--------CccCCCeEEC
Confidence 56778888531 3567888764
No 9
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.85 E-value=53 Score=19.51 Aligned_cols=27 Identities=33% Similarity=0.471 Sum_probs=15.7
Q ss_pred CCccCCcccccCCCC-------C-CCcEEeeecccc
Q psy14876 74 PVLGGNSFTLTDPDR-------A-NGNLVLPFTFRW 101 (121)
Q Consensus 74 pvLG~nsf~~~~~~~-------~-~~pI~iPF~F~W 101 (121)
|.+|+ .|++.+..+ + .-.+.|-|-++|
T Consensus 3 p~~g~-dF~l~d~~G~~vsl~~~~GK~vli~f~~t~ 37 (169)
T d2b7ka1 3 PSLGG-PFHLEDMYGNEFTEKNLLGKFSIIYFGFSN 37 (169)
T ss_dssp CCCCC-CCEEEETTSCEEEGGGGTTSCEEEEEECTT
T ss_pred CCcCC-CeEEEeCCCCEECHHHHCCCEEEEEEeccc
Confidence 56676 477766421 2 235666677776
No 10
>d1q3ja_ g.3.4.2 (A:) Antifungal peptide Alo3 {Insect (Acrocinus longimanus) [TaxId: 227548]}
Probab=9.59 E-value=52 Score=16.90 Aligned_cols=9 Identities=44% Similarity=1.298 Sum_probs=6.6
Q ss_pred CCCCCCCCC
Q psy14876 24 ASGICCGGL 32 (121)
Q Consensus 24 ~~G~CC~g~ 32 (121)
..|+||+|-
T Consensus 13 sqgnccsgy 21 (36)
T d1q3ja_ 13 SQGNCCSGY 21 (36)
T ss_dssp SSCCCTTSC
T ss_pred Cccccccce
Confidence 567898764
Done!