Query psy14879
Match_columns 138
No_of_seqs 199 out of 1465
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 23:08:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wb0_A Chitinase 1, chitotrios 100.0 7E-30 2.4E-34 211.1 2.6 119 1-121 323-445 (445)
2 1dqc_A Tachycitin; disulfide-r 99.7 7.8E-17 2.7E-21 103.0 5.6 59 70-133 9-67 (74)
3 3fy1_A Amcase, TSA1902, acidic 99.3 2.6E-13 8.9E-18 110.4 3.3 44 1-44 325-369 (395)
4 1vf8_A YM1, secretory protein; 99.1 1.3E-11 4.6E-16 99.6 2.7 44 1-44 325-369 (377)
5 1kfw_A Chitinase B; TIM barrel 98.3 1.4E-07 4.8E-12 77.6 2.4 36 1-44 389-424 (435)
6 3g6m_A Chitinase, crchi1; inhi 98.3 1.4E-07 4.9E-12 76.7 1.1 37 1-43 347-383 (406)
7 3fnd_A Chitinase; TIM-barrel, 98.3 1.8E-07 6E-12 73.6 1.2 35 1-41 265-299 (312)
8 1goi_A Chitinase B; chitin deg 98.3 5.8E-07 2E-11 74.9 4.3 37 1-44 389-425 (499)
9 1ll7_A Chitinase 1; beta-alpha 98.3 2.2E-07 7.6E-12 75.2 1.6 37 1-43 329-365 (392)
10 1w9p_A Chitinase; peptide inhi 98.2 3.2E-07 1.1E-11 75.3 1.2 37 1-43 370-406 (433)
11 3aqu_A AT4G19810; stress respo 98.0 1.4E-06 4.9E-11 69.6 1.9 36 1-44 311-346 (356)
12 3arx_A Chitinase A; TIM barrel 98.0 1.3E-06 4.3E-11 74.4 1.6 35 1-44 535-569 (584)
13 2pi6_A Chitinase-3-like protei 97.9 1.7E-06 5.8E-11 69.2 0.8 27 1-27 316-342 (361)
14 3oa5_A CHI1; TIM barrel, hydro 97.8 5E-06 1.7E-10 70.7 1.3 35 1-44 504-538 (574)
15 2dsk_A Chitinase; catalytic do 94.4 0.011 3.9E-07 46.5 1.2 21 2-22 245-265 (311)
16 3ian_A Chitinase; structural g 93.8 0.017 5.7E-07 45.4 1.0 26 3-28 269-296 (321)
17 1cnv_A Concanavalin B; plant c 93.5 0.0081 2.8E-07 47.0 -1.2 30 6-43 256-285 (299)
18 3ebv_A Chinitase A; chitinase 92.2 0.034 1.2E-06 43.4 0.7 31 6-42 262-292 (302)
19 3qho_A Endoglucanase, 458AA lo 72.9 0.83 2.8E-05 37.4 0.4 43 1-43 363-411 (458)
20 3bpo_A Interleukin 13; IL4, IL 58.3 1.9 6.6E-05 29.1 -0.2 18 10-27 30-47 (127)
21 3lb6_A Interleukin-13, IL-13; 52.1 3.7 0.00013 28.0 0.5 17 10-27 49-65 (132)
22 2ebn_A Endo-beta-N-acetylgluco 50.7 8.3 0.00028 29.7 2.3 41 3-45 237-277 (289)
23 1wn4_A Vontr protein; helix, p 44.0 1.9 6.5E-05 21.5 -1.5 11 2-12 17-27 (28)
24 1xu2_R Tumor necrosis factor r 39.3 11 0.00039 21.1 1.1 18 103-120 2-19 (47)
25 2b5b_A Defensin; antibiotic; N 37.8 10 0.00034 19.5 0.6 12 86-97 21-32 (36)
26 3ssb_I IMPI alpha, inducible m 28.9 12 0.00042 19.1 0.1 18 104-122 8-25 (32)
27 1ccv_A AMCI, chymotrypsin inhi 27.6 18 0.00061 20.5 0.6 29 86-121 25-53 (56)
28 1iyc_A Scarabaecin; antifungal 26.8 24 0.00082 18.0 0.9 11 103-113 16-26 (36)
29 3icg_A Endoglucanase D; cellul 23.8 32 0.0011 28.0 1.8 43 2-45 296-348 (515)
No 1
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=99.95 E-value=7e-30 Score=211.09 Aligned_cols=119 Identities=29% Similarity=0.649 Sum_probs=39.4
Q ss_pred CccccccCceeEEEEeccCCCCCC-ccCCCCCchhHHHHHhhhccccccccCC-C-CcccCCCCC-ccccCCccccCCCC
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRG-QCGSGKYPLISTMNTELEDYTVALEYDG-P-YESFSPSGK-YTTKEPNVVSCEEE 76 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g-~c~~~~~pl~~~i~~~l~~~~~~~~~~~-p-~~tt~~~~~-~tT~~p~~~~C~~~ 76 (138)
++||+++||||+|+|+|++|||+| .|+++++|||++|++.|.....+.+... + +++++++++ +++..+..+.|..+
T Consensus 323 ~~~~~~~gLgGv~~W~l~~Dd~~g~~c~~~~~~Ll~ai~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 402 (445)
T 1wb0_A 323 VSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQGK 402 (445)
T ss_dssp HHHHHHTTCCEEEEECGGGSCTTCSSSSSCSSHHHHHHHHHC--------------------------------------
T ss_pred HHHHHHCCCceEEEecccccccCCCcCCCCCchHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCC
Confidence 479999999999999999999999 8999999999999999975322110000 0 011111111 12223445679875
Q ss_pred CCcccccCCCCCCCceeecCCCcEEEeeCCCCceecCCCCccCCC
Q psy14879 77 DGHISYHPDKADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDWP 121 (138)
Q Consensus 77 ~~~~g~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~fn~~~~~Cd~p 121 (138)
.. |+++||.||++||+|.+|..+.+.||.||+||++++.||||
T Consensus 403 ~~--G~~~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 403 AD--GLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp ---------------------------------------------
T ss_pred CC--cccCCCCCCCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 33 79999999999999999999999999999999999999997
No 2
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.66 E-value=7.8e-17 Score=103.02 Aligned_cols=59 Identities=24% Similarity=0.598 Sum_probs=52.7
Q ss_pred cccCCCCCCcccccCCCCCCCceeecCCCcEEEeeCCCCceecCCCCccCCCCCCCCCCCCCCC
Q psy14879 70 VVSCEEEDGHISYHPDKADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDWPENVETCLHHTQA 133 (138)
Q Consensus 70 ~~~C~~~~~~~g~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~fn~~~~~Cd~p~~v~~C~~~~~~ 133 (138)
...|+. + |+|+||.||++||+|.+|.++++.||.||+||++++.||||++|. |...+..
T Consensus 9 ~~~C~~--~--G~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v~-C~~~~~~ 67 (74)
T 1dqc_A 9 YSPCLD--D--GPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG-CTSVNKE 67 (74)
T ss_dssp GCCSSS--S--EEECCSSCSSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTTT-CCSSCCC
T ss_pred CCcCCC--C--CEeCCcccCcceeECCCCcEEEeECcCCCEEChhhCcCcCcccCC-CCCCCCc
Confidence 356875 2 789999999999999999999999999999999999999999996 9877654
No 3
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A*
Probab=99.35 E-value=2.6e-13 Score=110.40 Aligned_cols=44 Identities=48% Similarity=1.079 Sum_probs=41.0
Q ss_pred CccccccCceeEEEEeccCCCCCC-ccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRG-QCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g-~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+||+|||+| .||.+++|||++|++.|+..
T Consensus 325 ~~~~~~~gLgG~~~W~ld~DD~~g~~C~~~~~pLl~~i~~~l~~~ 369 (395)
T 3fy1_A 325 AQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQ 369 (395)
T ss_dssp HHHHHHTTCSEEEEECGGGSCSSSTTTSSCSSHHHHHHHHHTTCT
T ss_pred HHHHHhCCCCEEEEEccccCccCCCcCCCCCchHHHHHHHHhCCC
Confidence 479999999999999999999999 59999999999999999754
No 4
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Probab=99.13 E-value=1.3e-11 Score=99.56 Aligned_cols=44 Identities=41% Similarity=0.942 Sum_probs=40.9
Q ss_pred CccccccCceeEEEEeccCCCCCC-ccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRG-QCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g-~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+.|||+| .||++++||+++|++.|...
T Consensus 325 ~~~~~~~gLgGv~~W~l~~Dd~~g~~c~~~~~~Ll~ai~~~l~~~ 369 (377)
T 1vf8_A 325 AQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDLNIH 369 (377)
T ss_dssp HHHHHHTTCCEEEEETGGGSCTTSTTTSSCSSHHHHHHHHHTTCC
T ss_pred HHHHHhCCCceEEEEeeecccCCCCcCCCCCchHHHHHHHHhccC
Confidence 479999999999999999999999 89999999999999999753
No 5
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1
Probab=98.34 E-value=1.4e-07 Score=77.56 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=31.9
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+. |++ .+|+++|++.|...
T Consensus 389 ~~y~~~~gLgGv~~W~l~~-D~~-------~~Ll~a~~~~l~~~ 424 (435)
T 1kfw_A 389 TDYIVSKGLGGGMWWELSG-DRN-------GELVGAMSDKFRAA 424 (435)
T ss_dssp HHHHHHTTCCEEEEECGGG-CTT-------CHHHHHHHHHHHHS
T ss_pred HHHHHhCCCCEEEEEecCC-CCC-------chHHHHHHHHhccc
Confidence 4799999999999999999 773 48999999999764
No 6
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=98.28 E-value=1.4e-07 Score=76.66 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=33.1
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELED 43 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~ 43 (138)
++||+++||||+|+|+|+.||. +.++|+++|++.|+.
T Consensus 347 ~~~~~~~gLgGv~~W~l~~Dd~------~~~~Ll~a~~~~l~~ 383 (406)
T 3g6m_A 347 VSYAKGLGLGGSMFWEASADKT------GSDSLIGTALSSMGS 383 (406)
T ss_dssp HHHHHHHTCCEEEEECGGGCCS------GGGCHHHHHHHHHCS
T ss_pred HHHHHhCCCceEEEEecccCCC------CchHHHHHHHHHhcC
Confidence 4799999999999999999993 368999999999964
No 7
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A
Probab=98.26 E-value=1.8e-07 Score=73.58 Aligned_cols=35 Identities=26% Similarity=0.496 Sum_probs=30.2
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhh
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTEL 41 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l 41 (138)
++||+++||||+|+|+|+.||+.+. .|+++|++..
T Consensus 265 ~~~~~~~gLgGv~~W~l~~Dd~~~~------~Ll~ai~~v~ 299 (312)
T 3fnd_A 265 CKFIKENDYAGVMIWQLFQDAHNDN------YDLKLINVVG 299 (312)
T ss_dssp HHHHHHTTCCEEEEECGGGSCCGGG------GGGCHHHHHH
T ss_pred HHHHHhcCCcEEEEEeCcCCCCCCc------cHHHHHHHhh
Confidence 4789999999999999999999544 4899998765
No 8
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Probab=98.26 E-value=5.8e-07 Score=74.95 Aligned_cols=37 Identities=19% Similarity=0.530 Sum_probs=33.3
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+.||+ .++|+++|++.|...
T Consensus 389 ~~y~~~~gLgGv~~W~l~~Dd~-------~~~Ll~ai~~~l~~~ 425 (499)
T 1goi_A 389 AKYIKQQQLGGVMFWHLGQDNR-------NGDLLAALDRYFNAA 425 (499)
T ss_dssp HHHHHHTTCCEEEEECGGGSCT-------TCHHHHHHHHHHHCT
T ss_pred HHHHHhcCCCceEEEeeccCCC-------CchHHHHHHHHhccC
Confidence 4799999999999999999995 589999999999754
No 9
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A
Probab=98.25 E-value=2.2e-07 Score=75.19 Aligned_cols=37 Identities=27% Similarity=0.568 Sum_probs=33.3
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELED 43 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~ 43 (138)
++||+++||||+|+|+|+.||. +.++|+++|++.|..
T Consensus 329 ~~~~~~~gLgGv~~W~l~~Dd~------~~~~Ll~a~~~~l~~ 365 (392)
T 1ll7_A 329 AEYITKNGMGGGMWWESSSDKT------GNESLVGTVVNGLGG 365 (392)
T ss_dssp HHHHHHTTCCEEEEECTTSCCC------GGGCHHHHHHHHTTC
T ss_pred HHHHHhCCCCeEEEEeecCCCC------CcchHHHHHHHHhcC
Confidence 4799999999999999999995 369999999999965
No 10
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A*
Probab=98.19 E-value=3.2e-07 Score=75.34 Aligned_cols=37 Identities=32% Similarity=0.558 Sum_probs=33.3
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELED 43 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~ 43 (138)
++||+++||||+|+|+|+.||. +.++|+++|++.|.+
T Consensus 370 ~~~~~~~gLgGv~~W~l~~Dd~------~~~~Ll~ai~~~l~~ 406 (433)
T 1w9p_A 370 SGYIKSLGLGGAMWWDSSSDKT------GSDSLITTVVNALGG 406 (433)
T ss_dssp HHHHHHHTCCEEEEECGGGSCC------GGGCHHHHHHHHTTC
T ss_pred HHHHHhCCCCEEEEEeccCCCC------CcchHHHHHHHHhcC
Confidence 4799999999999999999995 369999999999965
No 11
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana}
Probab=98.02 E-value=1.4e-06 Score=69.57 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=32.1
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+.|| .+.|++++++.|+..
T Consensus 311 ~~~~~~~gLgGv~~W~l~~Dd--------~~~ll~a~~~~l~~~ 346 (356)
T 3aqu_A 311 VRYAKQRGLLGYFSWHVGADD--------NSGLSRAASQAWDAT 346 (356)
T ss_dssp HHHHHHTTCCEEEEECGGGSS--------TTHHHHHHHHHHHHC
T ss_pred HHHHHhCCCCeEEEEeccCCC--------CchHHHHHHHHhccc
Confidence 469999999999999999987 479999999999754
No 12
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A*
Probab=98.02 E-value=1.3e-06 Score=74.35 Aligned_cols=35 Identities=20% Similarity=0.492 Sum_probs=31.2
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+.|| .+|+++|++.|...
T Consensus 535 ~~y~k~~gLgGv~~W~l~~Dd---------~~Ll~ai~~~l~~~ 569 (584)
T 3arx_A 535 GNYAKSLGLAGLFSWEIDADN---------GDILNAMHEGMAGG 569 (584)
T ss_dssp HHHHHHHTCCEEEEECGGGCC---------SHHHHHHHHHTTTC
T ss_pred HHHHHhCCCCEEEEEeccCCc---------HHHHHHHHHHhccC
Confidence 479999999999999999997 38999999999643
No 13
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Probab=97.93 E-value=1.7e-06 Score=69.17 Aligned_cols=27 Identities=41% Similarity=0.902 Sum_probs=24.3
Q ss_pred CccccccCceeEEEEeccCCCCCCccC
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCG 27 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~ 27 (138)
++||+++||||+|+|+|+.|||+|.+.
T Consensus 316 ~~~~~~~gLgGv~~W~l~~Dd~~g~~c 342 (361)
T 2pi6_A 316 ARYLKNRQLAGAMVWALDLDDFRGTFC 342 (361)
T ss_dssp HHHHHHTTCSEEEEECGGGSCSSSCSS
T ss_pred HHHHHhCCCcEEEEEcccccccCCCcC
Confidence 479999999999999999999987654
No 14
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A
Probab=97.79 E-value=5e-06 Score=70.67 Aligned_cols=35 Identities=31% Similarity=0.585 Sum_probs=30.7
Q ss_pred CccccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhcc
Q psy14879 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDY 44 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~ 44 (138)
++||+++||||+|+|+|+.|+ .+|+++|++.|+..
T Consensus 504 ~~yak~~gLGGv~iW~ld~D~---------g~LlnAi~~~Lg~~ 538 (574)
T 3oa5_A 504 GRYVKDKGLGGLFIWSGDQDN---------GILTNAAHEGLKRR 538 (574)
T ss_dssp HHHHHHHTCCEEEEETGGGCC---------SHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCEEEEEeccCCc---------HHHHHHHHHHhCCC
Confidence 479999999999999999982 38999999999754
No 15
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=94.40 E-value=0.011 Score=46.52 Aligned_cols=21 Identities=38% Similarity=0.795 Sum_probs=18.9
Q ss_pred ccccccCceeEEEEeccCCCC
Q psy14879 2 DWLKEDGYGGIMIWSVDMDDF 22 (138)
Q Consensus 2 ~~~~~~~lgG~m~w~~d~DD~ 22 (138)
+|+|+++|||+|+|++..|.-
T Consensus 245 ~~a~~~~~ggv~~WS~~rD~~ 265 (311)
T 2dsk_A 245 DWAIQHKIGSLAFWSVDRDHP 265 (311)
T ss_dssp HHHHHTTCSEECCBCGGGCSC
T ss_pred HHHhhcCCCEEEEeecccccC
Confidence 588999999999999998864
No 16
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp}
Probab=93.80 E-value=0.017 Score=45.39 Aligned_cols=26 Identities=35% Similarity=0.564 Sum_probs=19.2
Q ss_pred cccc--cCceeEEEEeccCCCCCCccCC
Q psy14879 3 WLKE--DGYGGIMIWSVDMDDFRGQCGS 28 (138)
Q Consensus 3 ~~~~--~~lgG~m~w~~d~DD~~g~c~~ 28 (138)
++++ .+|||||+|++..|+-+...|.
T Consensus 269 ~~~~~~~~~gGvM~W~~~~d~~n~~~g~ 296 (321)
T 3ian_A 269 RLKASGNEIKGLMTWSVNWDAGTNSNGE 296 (321)
T ss_dssp HHHHTTCCCCEEEEECHHHHTCBCTTCC
T ss_pred HHHhcCCCCceEEEEeeeccccCccCCc
Confidence 4554 4799999999999876555443
No 17
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5
Probab=93.51 E-value=0.0081 Score=46.98 Aligned_cols=30 Identities=20% Similarity=0.384 Sum_probs=22.7
Q ss_pred ccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhc
Q psy14879 6 EDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELED 43 (138)
Q Consensus 6 ~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~ 43 (138)
..+|||||+|++..|+. ....+.|++.|..
T Consensus 256 ~~~~gGvM~W~~~~d~~--------~~y~~~i~~~l~~ 285 (299)
T 1cnv_A 256 QTRYAGIALWNRQADKE--------TGYSTNIIRYLNA 285 (299)
T ss_dssp HHHEEEEEEECHHHHHH--------HTHHHHHHHHC--
T ss_pred CCCCeEEEEEccccccC--------CChHHHHHHHHhc
Confidence 46899999999999863 2367888888854
No 18
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor}
Probab=92.23 E-value=0.034 Score=43.37 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=23.4
Q ss_pred ccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhh
Q psy14879 6 EDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELE 42 (138)
Q Consensus 6 ~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~ 42 (138)
..+|||||+|++..|+.+| +...+.|...|.
T Consensus 262 ~~~~gGvM~W~~~~d~~~~------~~f~~~~~~~~~ 292 (302)
T 3ebv_A 262 YPDLRGAMTWSTNWDATAG------NAWSNSVGAHVH 292 (302)
T ss_dssp CTTCCEEEEECHHHHHHTT------THHHHHHHHHHH
T ss_pred CCCCceEEEEehhhcccCC------cChHHhHHhHhh
Confidence 4589999999999988543 566677766653
No 19
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=72.91 E-value=0.83 Score=37.43 Aligned_cols=43 Identities=16% Similarity=0.333 Sum_probs=25.8
Q ss_pred CccccccCceeEEEEeccC--CCCCCccCC----CCCchhHHHHHhhhc
Q psy14879 1 MDWLKEDGYGGIMIWSVDM--DDFRGQCGS----GKYPLISTMNTELED 43 (138)
Q Consensus 1 ~~~~~~~~lgG~m~w~~d~--DD~~g~c~~----~~~pl~~~i~~~l~~ 43 (138)
++|++++++.|...|++.- +|--|.=.. -..+-++.|++.|..
T Consensus 363 ~~yl~~~~i~~w~~W~~np~s~dt~Gll~~dW~t~~~~k~~~l~~~~~~ 411 (458)
T 3qho_A 363 VDWMIENKFCDFFYWSWNPDSGDTGGILQDDWTTIWEDKYNNLKRLMDS 411 (458)
T ss_dssp HHHHHHTTCCCEEESCSSSCCTTTCCSBCTTSSSBCHHHHHHHGGGGC-
T ss_pred HHHHHhcCCCCEEEEecCCCCCCCCcccccccCCcChHHHHHHHHHhcc
Confidence 4689999999999999952 222221111 144566666677643
No 20
>3bpo_A Interleukin 13; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 1ijz_A 1ik0_A 3g6d_A 3l5w_I 3l5x_A* 3l5y_A 1ga3_A
Probab=58.27 E-value=1.9 Score=29.15 Aligned_cols=18 Identities=28% Similarity=0.752 Sum_probs=11.9
Q ss_pred eeEEEEeccCCCCCCccC
Q psy14879 10 GGIMIWSVDMDDFRGQCG 27 (138)
Q Consensus 10 gG~m~w~~d~DD~~g~c~ 27 (138)
-|-|||++++|--.+.|.
T Consensus 30 NGSMVWSVnlt~a~~~C~ 47 (127)
T 3bpo_A 30 NGSMVWSINLTTAGMYCA 47 (127)
T ss_dssp GGCCEECCC---CCCSHH
T ss_pred CCceEEEEecccchhHHH
Confidence 488999999975666774
No 21
>3lb6_A Interleukin-13, IL-13; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_B*
Probab=52.07 E-value=3.7 Score=27.97 Aligned_cols=17 Identities=29% Similarity=0.835 Sum_probs=12.2
Q ss_pred eeEEEEeccCCCCCCccC
Q psy14879 10 GGIMIWSVDMDDFRGQCG 27 (138)
Q Consensus 10 gG~m~w~~d~DD~~g~c~ 27 (138)
-|-|||+++++- .+.|.
T Consensus 49 NGSMVWSVnlt~-~~~Ca 65 (132)
T 3lb6_A 49 NGSMVWSINLTA-GMYCA 65 (132)
T ss_dssp GGCEEECCCSSS-SCHHH
T ss_pred CCceEEEEeccc-hHHHH
Confidence 478999999963 23564
No 22
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5
Probab=50.68 E-value=8.3 Score=29.74 Aligned_cols=41 Identities=29% Similarity=0.456 Sum_probs=29.1
Q ss_pred cccccCceeEEEEeccCCCCCCccCCCCCchhHHHHHhhhccc
Q psy14879 3 WLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDYT 45 (138)
Q Consensus 3 ~~~~~~lgG~m~w~~d~DD~~g~c~~~~~pl~~~i~~~l~~~~ 45 (138)
-++++|+|+.|+|++..-+.-+ .......|+.+.+.|-+..
T Consensus 237 ~~~~~gyg~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~y~~~ 277 (289)
T 2ebn_A 237 NIVTKGYGGHMIFAMDPNRSNF--TSGQLPALKLIAKELYGDE 277 (289)
T ss_dssp HHHHHTCCEEEEECCCTTSTTT--TTTHHHHHHHHHHHHHSSC
T ss_pred HHHhCCcceEEEecCCcccccc--chhHHHHHHHHHHHHcCCc
Confidence 4688999999999998654211 1113578899988887654
No 23
>1wn4_A Vontr protein; helix, plant protein; NMR {Synthetic} SCOP: j.113.1.1
Probab=43.95 E-value=1.9 Score=21.49 Aligned_cols=11 Identities=27% Similarity=0.697 Sum_probs=8.9
Q ss_pred ccccccCceeE
Q psy14879 2 DWLKEDGYGGI 12 (138)
Q Consensus 2 ~~~~~~~lgG~ 12 (138)
.|+|+.+|||.
T Consensus 17 ~~ak~~~LGG~ 27 (28)
T 1wn4_A 17 AFAKKGNLGGL 27 (28)
T ss_dssp HHHHHHSSSCC
T ss_pred HHHhhcCCCCC
Confidence 47888999984
No 24
>1xu2_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 2.35A {Homo sapiens} SCOP: g.24.1.2 PDB: 2kn1_A* 1oqd_K
Probab=39.34 E-value=11 Score=21.13 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=14.6
Q ss_pred eeCCCCceecCCCCccCC
Q psy14879 103 MPCPSNLVFNPKENVCDW 120 (138)
Q Consensus 103 ~~Cp~Gl~fn~~~~~Cd~ 120 (138)
.+||+..|||.-+..|.-
T Consensus 2 ~~C~~eqYwD~LL~~C~p 19 (47)
T 1xu2_R 2 GQCSQNEYFDSLLHACIP 19 (47)
T ss_dssp --CCTTEEEETTTTEEEE
T ss_pred CCCcHHHHHHHHHhcccc
Confidence 579999999999999864
No 25
>2b5b_A Defensin; antibiotic; NMR {Caretta caretta}
Probab=37.75 E-value=10 Score=19.48 Aligned_cols=12 Identities=25% Similarity=0.683 Sum_probs=10.2
Q ss_pred CCCCCceeecCC
Q psy14879 86 KADCTHYYMCEG 97 (138)
Q Consensus 86 p~dC~~fy~C~~ 97 (138)
|.+|.+|+-|..
T Consensus 21 pyncgkyiccvp 32 (36)
T 2b5b_A 21 PYNCGKYICCVP 32 (36)
T ss_dssp SSSBCCSSCSSS
T ss_pred CccCCceEEeEE
Confidence 689999998864
No 26
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=28.89 E-value=12 Score=19.11 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=13.5
Q ss_pred eCCCCceecCCCCccCCCC
Q psy14879 104 PCPSNLVFNPKENVCDWPE 122 (138)
Q Consensus 104 ~Cp~Gl~fn~~~~~Cd~p~ 122 (138)
.|++|++.|. ...|..++
T Consensus 8 ~C~~G~vrn~-~G~CV~~~ 25 (32)
T 3ssb_I 8 YCEDGYARDV-NGKCIPIK 25 (32)
T ss_dssp EECTTEEECT-TSCEEEGG
T ss_pred CcCCCcEECC-CCCEECHH
Confidence 4899999886 56677665
No 27
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=27.64 E-value=18 Score=20.47 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=18.8
Q ss_pred CCCCCceeecCCCcEEEeeCCCCceecCCCCccCCC
Q psy14879 86 KADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDWP 121 (138)
Q Consensus 86 p~dC~~fy~C~~G~~~~~~Cp~Gl~fn~~~~~Cd~p 121 (138)
+..|.. .|..| =.|++|+|+|.. ..|..+
T Consensus 25 ~~~C~~--~C~~G----C~C~~G~v~~~~-g~CV~~ 53 (56)
T 1ccv_A 25 TRICTM--QCRIG----CQCQEGFLRNGE-GACVLP 53 (56)
T ss_dssp CCCSSS--SCEEE----EEECTTCEEETT-TEEECG
T ss_pred CCCCcC--cCCCC----CcCCCCeeECCC-CcccCh
Confidence 345553 45433 469999999874 677654
No 28
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=26.76 E-value=24 Score=18.05 Aligned_cols=11 Identities=36% Similarity=0.739 Sum_probs=9.0
Q ss_pred eeCCCCceecC
Q psy14879 103 MPCPSNLVFNP 113 (138)
Q Consensus 103 ~~Cp~Gl~fn~ 113 (138)
.+||.|.+||.
T Consensus 16 sncpkgkvwng 26 (36)
T 1iyc_A 16 SNCPKGKVWNG 26 (36)
T ss_dssp SCCCSSCEEET
T ss_pred cCCCCcceecC
Confidence 46999999984
No 29
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=23.76 E-value=32 Score=28.01 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=24.6
Q ss_pred ccccccCceeEEEEeccC-----CCCCCccC-CC---CCc-hhHHHHHhhhccc
Q psy14879 2 DWLKEDGYGGIMIWSVDM-----DDFRGQCG-SG---KYP-LISTMNTELEDYT 45 (138)
Q Consensus 2 ~~~~~~~lgG~m~w~~d~-----DD~~g~c~-~~---~~p-l~~~i~~~l~~~~ 45 (138)
+++++.+++. ++|+... ++--|.=. .. ..| |+++|.+.+.+..
T Consensus 296 ~~~~~~gi~~-~~W~~g~~~~~~~~~fGl~d~~~~~w~~~~~~~~l~~~~~~~~ 348 (515)
T 3icg_A 296 KSAKARGLTP-IWWDNGYSVAGKAETFGIFNRSNLTWDAPEVMKAFIKGIGGSS 348 (515)
T ss_dssp HHHHTTTCEE-EECCCSCCCTTSTTCCCCEETTTTEESSHHHHHHHHHHHCBCC
T ss_pred HHHHHcCCee-EEeCCCCCCCCCCCceeEEeCCCCccccHHHHHHHHHhcCCCc
Confidence 4678888876 8998732 11112211 10 233 7888888876553
Done!