RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14879
(138 letters)
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 71.3 bits (174), Expect = 3e-16
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTEL 41
+ + GG+ ++ + DDFRGQC KYP++ + L
Sbjct: 287 AAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAIKYRL 327
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1,
saccharide binding domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 302
Score = 69.0 bits (168), Expect = 2e-15
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQ-CGSGKYPLISTMNTELEDYT 45
WLK++ GG ++W +DMDDF G C +PL ST+ +L ++
Sbjct: 255 AQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDLNIHS 300
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 297
Score = 65.6 bits (159), Expect = 3e-14
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQ-CGSGKYPLISTMNTEL 41
+ +LK+ G GG M+W++D+DDF G C G+YPLI T+ EL
Sbjct: 255 VSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQEL 296
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein
(SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 292
Score = 62.1 bits (150), Expect = 4e-13
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQ-CGSG-KYPLISTMNTELED 43
+LK G M+W++D+DDFRG CG +PL S + L +
Sbjct: 248 ARYLKNRQLAGAMVWALDLDDFRGTFCGQNLTFPLTSAVKDVLAE 292
>d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus
tridentatus) [TaxId: 6853]}
Length = 73
Score = 54.6 bits (131), Expect = 1e-11
Identities = 12/44 (27%), Positives = 16/44 (36%)
Query: 82 YHPDKADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDWPENVE 125
+ + C +Y C CP L +N VCDWP
Sbjct: 17 PNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG 60
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 356
Score = 53.6 bits (128), Expect = 5e-10
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 11/68 (16%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDYTVALEYDGPYESFSPS 60
++K+ GG+M W + D+ G L++ ++ A +YD
Sbjct: 299 AKYIKQQQLGGVMFWHLGQDNRNG-------DLLAALDRYFN----AADYDDSQLDMGTG 347
Query: 61 GKYTTKEP 68
+YT P
Sbjct: 348 LRYTGVGP 355
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus
circulans [TaxId: 1397]}
Length = 347
Score = 39.4 bits (91), Expect = 5e-05
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 8/41 (19%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTEL 41
++K G GG M W + D + L + + +L
Sbjct: 315 TAYIKSKGLGGAMFWELSGDRNKT--------LQNKLKADL 347
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B
{Arthrobacter sp., tad20 [TaxId: 1667]}
Length = 374
Score = 38.7 bits (89), Expect = 1e-04
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 8/47 (17%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTELEDYTVA 47
D++ G GG M W + D L+ M+ +
Sbjct: 328 TDYIVSKGLGGGMWWELSGDR--------NGELVGAMSDKFRAAAPG 366
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus
fumigatus [TaxId: 5085]}
Length = 333
Score = 36.3 bits (83), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTEL 41
++K G GG M W D G LI+T+ L
Sbjct: 270 SGYIKSLGLGGAMWWDSSSDKT------GSDSLITTVVNAL 304
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber
tree (Hevea brasiliensis) [TaxId: 3981]}
Length = 273
Score = 34.0 bits (77), Expect = 0.003
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 5 KEDGYGGIMIWSVDMDDFRG 24
K YGG+M+WS DD G
Sbjct: 245 KSPKYGGVMLWSKFYDDKNG 264
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia
ensiformis), Concanavalin B [TaxId: 3823]}
Length = 283
Score = 33.2 bits (75), Expect = 0.006
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 5 KEDGYGGIMIWSVDMDDFRG 24
+ Y GI +W+ D G
Sbjct: 255 LQTRYAGIALWNRQADKETG 274
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 358
Score = 31.7 bits (71), Expect = 0.024
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 1 MDWLKEDGYGGIMIWSVDMDD 21
++ + GG+ W +D D+
Sbjct: 320 GKYVLDKQLGGLFSWEIDADN 340
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis,
Narbonin [TaxId: 3912]}
Length = 289
Score = 30.1 bits (67), Expect = 0.061
Identities = 4/33 (12%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 1 MDWLKEDG-YGGIMIWSVDMDDFRGQCGSGKYP 32
L + G+ W+ + + G +
Sbjct: 246 CTRLVQTFSLPGVFFWNANDSVIPKRDGDKPFI 278
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat
(Triticum aestivum) [TaxId: 4565]}
Length = 274
Score = 29.3 bits (65), Expect = 0.14
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 9 YGGIMIWSVDMDDFRG 24
YGGIM+W D
Sbjct: 250 YGGIMLWDRYFDKQTN 265
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus
(Coccidioides immitis) [TaxId: 5501]}
Length = 330
Score = 29.0 bits (64), Expect = 0.16
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Query: 1 MDWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPLISTMNTEL 41
+++ ++G GG M W D +G L+ T+ L
Sbjct: 267 AEYITKNGMGGGMWWESSSDK------TGNESLVGTVVNGL 301
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Streptomyces plicatus, endoglycosidase H [TaxId: 1922]}
Length = 265
Score = 28.1 bits (62), Expect = 0.28
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 2 DWLKEDGYGGIMIWSVDMDDFRGQCGSGKYPL 33
++GYG + +++D D + L
Sbjct: 226 RRTVDEGYGVYLTYNLDGGDRTADVSAFTREL 257
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Flavobacterium meningosepticum, endoglycosidase F3
[TaxId: 238]}
Length = 282
Score = 26.7 bits (58), Expect = 1.0
Identities = 6/20 (30%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Query: 2 DWLKEDG-YGGIMIWSVDMD 20
W G GG+MI++ + +
Sbjct: 251 KWTPTQGAKGGMMIYTYNSN 270
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.135 0.452
Gapped
Lambda K H
0.267 0.0493 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 607,218
Number of extensions: 27856
Number of successful extensions: 78
Number of sequences better than 10.0: 1
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 26
Length of query: 138
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 62
Effective length of database: 1,364,116
Effective search space: 84575192
Effective search space used: 84575192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 48 (22.8 bits)