Query psy1488
Match_columns 630
No_of_seqs 508 out of 3011
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 23:10:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz1_A RHO guanine nucleotide 100.0 2.1E-73 7.2E-78 625.6 44.8 436 178-616 30-466 (466)
2 2dfk_A Collybistin II; DH doma 100.0 1.1E-60 3.7E-65 513.9 42.5 392 233-624 3-397 (402)
3 2z0q_A XPLN, RHO guanine nucle 100.0 1.4E-51 5E-56 435.1 30.6 321 262-589 12-345 (346)
4 1xcg_A PDZ-rhogef, RHO guanine 100.0 1.3E-50 4.3E-55 431.6 34.4 319 262-591 14-367 (368)
5 2vrw_B P95VAV, VAV1, proto-onc 100.0 8.6E-50 2.9E-54 430.4 38.5 317 264-593 20-338 (406)
6 3jv3_A Intersectin-1; SH3 doma 100.0 4.2E-51 1.4E-55 419.6 24.3 278 179-468 3-283 (283)
7 1dbh_A Protein (human SOS 1); 100.0 1.4E-50 4.8E-55 428.8 28.1 310 270-590 4-349 (354)
8 3t06_A PDZ-rhogef, RHO guanine 100.0 2E-49 7E-54 429.3 37.1 320 263-593 57-411 (418)
9 3mpx_A FYVE, rhogef and PH dom 100.0 9.5E-50 3.2E-54 434.1 30.7 344 265-623 18-384 (434)
10 3p6a_A RHO guanine nucleotide 100.0 6.3E-49 2.2E-53 419.9 36.2 316 262-593 20-374 (377)
11 1txd_A RHO guanine nucleotide 100.0 2.1E-48 7.2E-53 416.7 35.7 327 263-600 18-379 (385)
12 3odw_A RHO guanine nucleotide 100.0 1.4E-48 4.7E-53 433.1 34.8 316 263-594 174-528 (536)
13 1foe_A T-lymphoma invasion and 100.0 1.8E-47 6.3E-52 408.3 34.6 325 264-595 6-371 (377)
14 3ky9_A Proto-oncogene VAV; cal 100.0 1.7E-47 5.7E-52 430.5 34.0 319 264-595 192-512 (587)
15 1kz7_A Guanine nucleotide exch 100.0 2.9E-46 9.9E-51 395.0 35.3 298 265-593 7-328 (353)
16 2rgn_B RHOA/RAC/CDC42 exchange 100.0 6.7E-45 2.3E-49 384.7 34.0 298 266-594 9-322 (354)
17 1nty_A Triple functional domai 100.0 1.2E-44 4E-49 376.4 33.2 293 265-591 5-309 (311)
18 3ksy_A SOS-1, SON of sevenless 100.0 8.4E-46 2.9E-50 439.1 19.1 323 264-597 195-553 (1049)
19 3jzy_A Intersectin 2; C2 domai 100.0 5.5E-47 1.9E-51 421.0 0.0 320 263-595 21-367 (510)
20 1by1_A Protein (PIX); RHO-GTPa 100.0 1.5E-35 5E-40 289.9 12.7 188 267-459 11-199 (209)
21 2lg1_A A-kinase anchor protein 99.8 1.9E-19 6.7E-24 170.7 7.7 163 425-599 2-181 (185)
22 1zc3_B Exocyst complex protein 99.6 6.3E-15 2.2E-19 127.8 16.5 105 480-592 3-109 (113)
23 2kbt_A Chimera of proto-oncoge 99.6 3.2E-16 1.1E-20 141.9 4.1 117 178-294 5-131 (142)
24 2lx7_A GAS-7, growth arrest-sp 99.6 3.6E-16 1.2E-20 119.0 3.5 55 179-233 4-60 (60)
25 3qwm_A Iqsec1, IQ motif and SE 99.5 7.9E-14 2.7E-18 123.1 14.5 111 477-594 5-126 (140)
26 1v61_A RAC/CDC42 guanine nucle 99.5 1.9E-14 6.5E-19 127.2 9.4 119 466-593 10-129 (132)
27 2lj0_A Sorbin and SH3 domain-c 99.5 4.4E-15 1.5E-19 115.2 4.2 56 178-233 6-63 (65)
28 2ebp_A SAM and SH3 domain-cont 99.5 3.2E-14 1.1E-18 113.6 6.1 58 178-235 9-68 (73)
29 2eyx_A V-CRK sarcoma virus CT1 99.5 1.9E-14 6.7E-19 112.9 4.2 56 179-234 7-64 (67)
30 2nwm_A Vinexin; cell adhesion; 99.5 2.3E-14 7.9E-19 111.6 4.6 56 180-235 3-58 (65)
31 2ysq_A RHO guanine nucleotide 99.5 3.5E-14 1.2E-18 116.0 5.8 64 178-241 10-73 (81)
32 2bzy_A CRK-like protein, CRKL 99.5 2.1E-14 7E-19 112.8 4.1 58 179-236 2-61 (67)
33 2fei_A CD2-associated protein; 99.5 1.3E-14 4.4E-19 113.0 2.7 58 179-236 2-59 (65)
34 2bz8_A SH3-domain kinase bindi 99.5 1.9E-14 6.7E-19 109.5 3.2 55 179-233 2-56 (58)
35 1w70_A Neutrophil cytosol fact 99.5 2.6E-14 9E-19 109.6 3.8 55 179-233 5-59 (60)
36 2dbk_A CRK-like protein; struc 99.5 9E-14 3.1E-18 115.4 7.2 59 178-236 16-76 (88)
37 1k4u_S Phagocyte NADPH oxidase 99.5 3.9E-14 1.3E-18 109.4 4.7 55 179-233 6-60 (62)
38 2j6f_A CD2-associated protein; 99.4 2.6E-14 8.9E-19 110.4 3.4 56 179-234 2-58 (62)
39 2ew3_A SH3-containing GRB2-lik 99.4 3.2E-14 1.1E-18 111.8 4.0 56 179-234 4-59 (68)
40 1uti_A GRB2-related adaptor pr 99.4 3.1E-14 1.1E-18 108.4 3.7 55 179-233 2-56 (58)
41 2epd_A RHO GTPase-activating p 99.4 3.7E-14 1.3E-18 114.3 4.0 60 178-237 10-69 (76)
42 2ydl_A SH3 domain-containing k 99.4 4.8E-14 1.7E-18 111.1 4.5 56 179-234 3-60 (69)
43 1jo8_A ABP1P, actin binding pr 99.4 3E-14 1E-18 108.4 3.2 54 180-233 2-57 (58)
44 2dl4_A Protein STAC; SH3 domai 99.4 6.9E-14 2.4E-18 110.1 5.1 58 178-235 7-64 (68)
45 2g6f_X RHO guanine nucleotide 99.4 4.7E-14 1.6E-18 107.8 4.0 54 179-232 5-58 (59)
46 2dmo_A Neutrophil cytosol fact 99.4 7.6E-14 2.6E-18 109.9 5.3 56 179-234 8-63 (68)
47 2djq_A SH3 domain containing r 99.4 7.5E-14 2.6E-18 109.9 5.3 57 178-234 7-63 (68)
48 2gnc_A SLIT-ROBO RHO GTPase-ac 99.4 4.1E-14 1.4E-18 108.5 3.6 54 178-231 6-59 (60)
49 1zx6_A YPR154WP; SH3 domain, p 99.4 5.1E-14 1.8E-18 107.1 4.0 55 179-233 3-57 (58)
50 2dl8_A SLIT-ROBO RHO GTPase-ac 99.4 7.2E-14 2.5E-18 111.3 5.0 57 178-234 9-65 (72)
51 2xmf_A Myosin 1E SH3; motor pr 99.4 5.7E-14 1.9E-18 107.7 4.0 54 179-232 6-59 (60)
52 2jte_A CD2-associated protein; 99.4 7.5E-14 2.6E-18 108.5 4.5 56 178-233 6-63 (64)
53 1sem_A SEM-5; SRC-homology 3 ( 99.4 6E-14 2E-18 106.8 3.7 55 179-233 3-57 (58)
54 2drm_A Acanthamoeba myosin IB; 99.4 7.8E-14 2.7E-18 106.1 4.3 54 179-232 4-57 (58)
55 4e6r_A Cytoplasmic protein NCK 99.4 8.6E-14 2.9E-18 105.9 4.5 55 179-233 2-56 (58)
56 1b07_A Protein (proto-oncogene 99.4 7.7E-14 2.6E-18 108.7 4.2 55 179-233 4-59 (65)
57 2ed1_A 130 kDa phosphatidylino 99.4 8.5E-14 2.9E-18 112.2 4.6 58 178-235 10-70 (76)
58 1uj0_A Signal transducing adap 99.4 8.2E-14 2.8E-18 107.5 4.2 55 179-233 6-60 (62)
59 1z9q_A Neutrophil cytosol fact 99.4 2.6E-14 8.7E-19 115.5 1.3 57 178-234 18-74 (79)
60 1cka_A C-CRK N-terminal SH3 do 99.4 8.8E-14 3E-18 105.4 4.2 54 179-232 2-56 (57)
61 2l0a_A STAM-1, signal transduc 99.4 1.8E-13 6.1E-18 108.6 6.0 54 178-231 17-70 (72)
62 1x2k_A OSTF1, osteoclast stimu 99.4 1.4E-13 4.7E-18 108.4 5.3 56 178-233 7-62 (68)
63 1wyx_A CRK-associated substrat 99.4 7.8E-14 2.7E-18 110.2 3.8 56 179-234 4-62 (69)
64 2ed0_A ABL interactor 2; coile 99.4 2E-13 6.9E-18 110.5 6.4 57 178-234 17-73 (78)
65 3ulr_B SRC substrate cortactin 99.4 8.4E-14 2.9E-18 108.6 3.9 55 179-233 10-64 (65)
66 2vwf_A Growth factor receptor- 99.4 7.9E-14 2.7E-18 106.1 3.7 55 179-233 3-57 (58)
67 1oot_A Hypothetical 40.4 kDa p 99.4 8.7E-14 3E-18 106.7 3.8 54 179-232 4-59 (60)
68 1tg0_A BBC1 protein, myosin ta 99.4 9.5E-14 3.3E-18 109.3 4.1 56 178-233 7-67 (68)
69 2i0n_A Class VII unconventiona 99.4 1.2E-13 4.1E-18 112.4 4.8 57 179-235 11-68 (80)
70 2ak5_A RHO guanine nucleotide 99.4 9.7E-14 3.3E-18 107.9 4.1 55 179-233 7-61 (64)
71 1ugv_A KIAA0621, olygophrenin- 99.4 6.1E-14 2.1E-18 111.7 3.0 57 179-235 11-68 (72)
72 1j3t_A Intersectin 2; beta bar 99.4 1.9E-13 6.5E-18 109.5 5.9 58 178-236 10-67 (74)
73 1zlm_A Osteoclast stimulating 99.4 1.1E-13 3.7E-18 105.4 4.1 55 178-232 3-57 (58)
74 1x2q_A Signal transducing adap 99.4 3E-13 1E-17 112.2 7.2 59 178-236 17-75 (88)
75 2ege_A Uncharacterized protein 99.4 1.4E-13 4.9E-18 110.5 5.1 57 178-234 7-71 (75)
76 3ngp_A Spectrin alpha chain, b 99.4 9E-14 3.1E-18 107.3 3.7 56 178-233 6-61 (62)
77 2yuo_A CIP85, RUN and TBC1 dom 99.4 1.5E-13 5.1E-18 111.4 5.1 59 178-236 7-65 (78)
78 1x2p_A Protein arginine N-meth 99.4 1.5E-13 5.2E-18 108.1 5.0 56 179-234 8-63 (68)
79 2dl3_A Sorbin and SH3 domain-c 99.4 1.8E-13 6.2E-18 107.7 5.3 57 178-234 7-63 (68)
80 2fpe_A C-JUN-amino-terminal ki 99.4 1.3E-13 4.3E-18 106.5 4.3 55 179-233 4-60 (62)
81 2dl7_A KIAA0769 protein; SH3 d 99.4 1.9E-13 6.4E-18 109.2 5.4 57 178-234 8-67 (73)
82 2da9_A SH3-domain kinase bindi 99.4 1.8E-13 6.3E-18 108.3 5.2 57 178-234 7-65 (70)
83 2a28_A BZZ1 protein; SH3 domai 99.4 1.1E-13 3.7E-18 103.6 3.7 52 180-231 2-54 (54)
84 2cre_A HEF-like protein; SH3 d 99.4 1.6E-13 5.4E-18 109.1 4.6 57 178-234 7-66 (71)
85 4glm_A Dynamin-binding protein 99.4 1.3E-13 4.3E-18 110.0 4.0 57 178-234 13-69 (72)
86 1x69_A Cortactin isoform A; SH 99.4 2.3E-13 7.8E-18 110.5 5.4 57 178-234 17-73 (79)
87 1uhf_A Intersectin 2; beta bar 99.4 1.7E-13 6E-18 108.1 4.6 55 179-234 9-63 (69)
88 2o2o_A SH3-domain kinase-bindi 99.4 1.6E-13 5.3E-18 114.5 4.5 59 178-236 18-76 (92)
89 1nm7_A Peroxisomal membrane pr 99.4 1E-13 3.4E-18 108.9 3.1 55 178-232 7-68 (69)
90 2b86_A Cytoplasmic protein NCK 99.4 2.1E-13 7.2E-18 106.6 4.9 54 179-233 5-59 (67)
91 2k9g_A SH3 domain-containing k 99.4 2.6E-13 8.8E-18 108.4 5.5 57 178-234 9-67 (73)
92 2fpf_A C-JUN-amino-terminal ki 99.4 1.4E-13 4.8E-18 109.4 3.8 57 179-235 7-65 (71)
93 2ke9_A Caskin-2; SH3 domain, A 99.4 1.4E-13 4.8E-18 112.5 3.9 57 178-234 18-81 (83)
94 2j05_A RAS GTPase-activating p 99.4 1.8E-13 6.2E-18 106.7 4.3 55 179-233 6-63 (65)
95 1neg_A Spectrin alpha chain, b 99.4 1.5E-13 5.1E-18 112.3 4.0 57 178-234 17-73 (83)
96 1wi7_A SH3-domain kinase bindi 99.4 9.7E-14 3.3E-18 109.3 2.7 56 179-234 8-63 (68)
97 1wie_A RIM binding protein 2; 99.4 3.1E-13 1E-17 114.0 6.0 59 178-236 17-83 (96)
98 3u23_A CD2-associated protein; 99.4 1.3E-13 4.5E-18 107.5 3.5 56 179-234 8-63 (65)
99 2dlp_A KIAA1783 protein; SH3 d 99.4 1.7E-13 5.8E-18 112.9 4.3 59 178-236 8-68 (85)
100 1aww_A ATK, AMGX1, BPK, bruton 99.4 1.7E-13 5.9E-18 107.5 4.0 56 178-233 8-64 (67)
101 2lcs_A NAP1-binding protein 2; 99.4 2.3E-13 7.9E-18 108.5 4.7 56 179-234 6-63 (73)
102 2ekh_A SH3 and PX domain-conta 99.4 3.2E-13 1.1E-17 109.8 5.7 58 179-236 9-66 (80)
103 1y0m_A 1-phosphatidylinositol- 99.4 1.4E-13 4.7E-18 105.9 3.2 56 179-234 4-60 (61)
104 2d8h_A SH3YL1 protein; SH3 dom 99.4 2.4E-13 8.1E-18 110.7 4.8 57 178-234 17-75 (80)
105 2o9s_A Ponsin; SH3 domain, sig 99.4 3E-13 1E-17 106.2 5.0 57 178-234 6-64 (67)
106 2dil_A Proline-serine-threonin 99.4 2.6E-13 8.8E-18 107.2 4.7 56 179-234 9-64 (69)
107 1wxt_A Hypothetical protein FL 99.4 3.5E-13 1.2E-17 106.0 5.4 57 178-235 7-64 (68)
108 3c0c_A Endophilin-A2; endocyto 99.4 2.1E-13 7E-18 109.0 4.1 55 179-233 14-68 (73)
109 2yun_A Nostrin; nitric oxide s 99.4 2.9E-13 1E-17 109.9 5.1 58 179-236 8-65 (79)
110 1x6b_A RHO guanine exchange fa 99.4 3.4E-13 1.2E-17 109.4 5.5 57 178-235 17-75 (79)
111 2eqi_A Phospholipase C, gamma 99.4 2.1E-13 7.2E-18 107.7 3.9 57 179-235 8-65 (69)
112 2jt4_A Cytoskeleton assembly c 99.4 3.7E-13 1.3E-17 106.9 5.2 56 179-234 7-65 (71)
113 1spk_A RSGI RUH-010, riken cDN 99.4 1.9E-13 6.4E-18 109.0 3.4 57 179-235 8-68 (72)
114 2v1q_A SLA1, cytoskeleton asse 99.4 2.5E-13 8.5E-18 104.1 3.9 54 179-232 3-59 (60)
115 1gl5_A Tyrosine-protein kinase 99.4 2.4E-13 8.4E-18 106.6 3.9 55 179-233 3-58 (67)
116 1ujy_A RHO guanine nucleotide 99.4 1.5E-13 5E-18 110.8 2.6 57 178-234 10-66 (76)
117 1zuu_A BZZ1 protein; SH3 domai 99.4 1.3E-13 4.3E-18 104.9 2.2 52 180-231 3-57 (58)
118 2enm_A Sorting nexin-9; SH3-li 99.4 4.1E-13 1.4E-17 108.5 5.2 58 179-236 10-70 (77)
119 1yn8_A NBP2, NAP1-binding prot 99.4 3E-13 1E-17 103.3 4.1 55 179-233 2-58 (59)
120 2pqh_A Spectrin alpha chain, b 99.4 2.6E-13 8.9E-18 110.4 4.0 58 179-236 3-60 (80)
121 2egc_A SH3 and PX domain-conta 99.4 4.3E-13 1.5E-17 107.6 5.2 56 178-234 10-69 (75)
122 1csk_A C-SRC SH3 domain; phosp 99.4 3E-13 1E-17 107.4 4.3 55 179-233 12-68 (71)
123 1zuy_A Myosin-5 isoform; SH3 d 99.4 2.9E-13 1E-17 102.9 4.0 53 180-232 2-57 (58)
124 2csi_A RIM-BP2, RIM binding pr 99.4 3.5E-13 1.2E-17 108.5 4.6 57 178-234 7-71 (76)
125 2dbm_A SH3-containing GRB2-lik 99.4 2.3E-13 7.7E-18 108.8 3.5 56 179-234 8-63 (73)
126 2oi3_A Tyrosine-protein kinase 99.4 1.2E-12 4.2E-17 108.1 7.9 56 178-234 25-82 (86)
127 1ruw_A Myosin-3 isoform, MYO3; 99.4 3.8E-13 1.3E-17 106.2 4.5 58 179-236 3-63 (69)
128 3rnj_A Brain-specific angiogen 99.4 2.4E-13 8.1E-18 106.7 3.3 55 179-233 8-66 (67)
129 1uhc_A KIAA1010 protein; beta 99.4 4.9E-13 1.7E-17 108.6 5.3 55 179-233 14-72 (79)
130 2x3w_D Syndapin I, protein kin 99.4 2.3E-13 8E-18 104.2 3.2 54 179-232 4-59 (60)
131 2ega_A SH3 and PX domain-conta 99.4 2.8E-13 9.7E-18 107.3 3.7 56 179-234 9-64 (70)
132 1uff_A Intersectin 2; beta bar 99.4 1.8E-13 6.3E-18 114.7 2.6 59 179-237 6-66 (93)
133 1u5s_A Cytoplasmic protein NCK 99.4 3.4E-13 1.2E-17 107.1 4.0 58 178-235 6-66 (71)
134 4esr_A Jouberin; AHI-1, AHI1, 99.4 3.1E-13 1.1E-17 106.7 3.8 55 179-233 7-62 (69)
135 2dm1_A Protein VAV-2; RHO fami 99.4 2.8E-13 9.5E-18 108.2 3.5 56 179-234 8-65 (73)
136 2oaw_A Spectrin alpha chain, b 99.4 2.3E-13 7.9E-18 106.1 2.9 55 179-233 2-64 (65)
137 3thk_A Spectrin alpha chain, b 99.4 3.4E-13 1.2E-17 107.7 4.0 56 179-234 6-61 (73)
138 2yup_A Vinexin; sorbin and SH3 99.4 5E-13 1.7E-17 111.4 5.2 58 178-235 17-76 (90)
139 2dl5_A KIAA0769 protein; SH3 d 99.3 6E-13 2.1E-17 107.7 5.4 57 178-234 13-71 (78)
140 1x43_A Endophilin B1, SH3 doma 99.3 7.6E-13 2.6E-17 108.0 6.0 57 178-234 17-75 (81)
141 1i07_A Epidermal growth factor 99.3 2.6E-13 8.9E-18 104.0 3.0 54 180-234 3-57 (60)
142 1w1f_A Tyrosine-protein kinase 99.3 4.8E-13 1.7E-17 104.3 4.6 55 178-233 7-63 (65)
143 2jxb_A T-cell surface glycopro 99.3 1.6E-12 5.4E-17 107.3 7.9 53 179-232 32-85 (86)
144 2kxd_A 11-MER peptide, SH3 dom 99.3 1.7E-13 5.9E-18 109.4 1.9 55 180-235 2-56 (73)
145 3eg3_A Proto-oncogene tyrosine 99.3 3.9E-13 1.3E-17 104.1 3.7 55 179-233 6-61 (63)
146 2cub_A Cytoplasmic protein NCK 99.3 7.8E-13 2.7E-17 109.6 5.7 57 178-234 17-73 (88)
147 1wx6_A Cytoplasmic protein NCK 99.3 1.1E-12 3.7E-17 109.6 6.5 59 178-236 17-78 (91)
148 3h0h_A Proto-oncogene tyrosine 99.3 4.6E-13 1.6E-17 107.0 4.1 55 179-233 16-72 (73)
149 2rqr_A CED-12 homolog, engulfm 99.3 4.9E-12 1.7E-16 110.8 10.9 55 178-233 59-116 (119)
150 3cqt_A P59-FYN, proto-oncogene 99.3 4.1E-13 1.4E-17 108.8 3.7 58 179-236 6-65 (79)
151 2dnu_A RUH-061, SH3 multiple d 99.3 4.6E-13 1.6E-17 106.3 3.9 56 179-234 9-64 (71)
152 2iim_A Proto-oncogene tyrosine 99.3 6E-13 2.1E-17 102.6 4.4 53 179-232 7-61 (62)
153 4ag1_C Fynomer; hydrolase-de n 99.3 4.4E-13 1.5E-17 110.0 3.8 58 178-235 6-65 (84)
154 4f14_A Nebulette; SH3 domain, 99.3 4.6E-13 1.6E-17 104.0 3.7 55 179-233 7-63 (64)
155 2kxc_A Brain-specific angiogen 99.3 3.2E-13 1.1E-17 106.0 2.7 55 179-233 7-65 (67)
156 2gqi_A RAS GTPase-activating p 99.3 2.9E-13 9.8E-18 107.5 2.4 55 179-233 8-65 (71)
157 1i1j_A Melanoma derived growth 99.3 4.9E-13 1.7E-17 114.7 4.0 57 178-234 22-89 (108)
158 2csq_A RIM-BP2, RIM binding pr 99.3 7.9E-13 2.7E-17 111.7 5.2 61 178-238 17-86 (97)
159 2jw4_A Cytoplasmic protein NCK 99.3 9.5E-13 3.3E-17 104.8 5.3 55 179-234 8-63 (72)
160 2cuc_A SH3 domain containing r 99.3 4.9E-13 1.7E-17 105.9 3.6 56 179-234 8-65 (70)
161 2rf0_A Mitogen-activated prote 99.3 6.1E-13 2.1E-17 110.2 4.3 53 179-231 30-88 (89)
162 2ecz_A Sorbin and SH3 domain-c 99.3 4.3E-13 1.5E-17 106.2 3.0 56 179-234 8-65 (70)
163 1ue9_A Intersectin 2; beta bar 99.3 1.1E-12 3.9E-17 106.7 5.5 58 178-235 7-69 (80)
164 2v1r_A Peroxisomal membrane pr 99.3 6.7E-13 2.3E-17 108.1 4.2 56 178-233 14-76 (80)
165 2ct3_A Vinexin; SH3 domian, st 99.3 1.1E-12 3.6E-17 104.0 5.1 56 179-234 8-65 (70)
166 1s1n_A Nephrocystin 1; beta ba 99.3 5.3E-13 1.8E-17 105.0 3.3 55 179-233 11-66 (68)
167 1awj_A ITK; transferase, regul 99.3 3E-13 1E-17 109.2 1.9 54 179-232 21-75 (77)
168 1udl_A Intersectin 2, KIAA1256 99.3 1.6E-12 5.4E-17 110.2 6.4 58 178-235 34-91 (98)
169 2vkn_A Protein SSU81; membrane 99.3 8.8E-13 3E-17 104.4 4.2 57 177-234 4-63 (70)
170 1gbq_A GRB2; complex (signal t 99.3 4.4E-13 1.5E-17 107.3 2.4 55 179-233 10-65 (74)
171 2d8j_A FYN-related kinase; SH3 99.3 1.1E-12 3.7E-17 106.0 4.5 56 179-234 8-72 (77)
172 2rqv_A BUD emergence protein 1 99.3 4.3E-13 1.5E-17 114.9 2.2 56 179-234 6-64 (108)
173 1fho_A UNC-89; pleckstrin homo 99.3 1.1E-12 3.6E-17 114.2 4.6 108 480-595 5-117 (119)
174 1jqq_A PEX13P, peroxisomal mem 99.3 1.4E-12 4.9E-17 109.1 5.1 58 178-235 14-78 (92)
175 2cud_A SRC-like-adapter; SH3 d 99.3 1.9E-12 6.6E-17 104.9 5.4 54 179-233 18-73 (79)
176 2kgt_A Tyrosine-protein kinase 99.3 8.7E-13 3E-17 105.1 3.0 54 179-233 11-70 (72)
177 1wxb_A Epidermal growth factor 99.3 1.3E-12 4.4E-17 102.7 4.0 55 179-234 8-63 (68)
178 1hsq_A Phospholipase C-gamma ( 99.3 3.3E-13 1.1E-17 107.1 0.0 58 179-236 7-65 (71)
179 2ct4_A CDC42-interacting prote 99.3 3.3E-12 1.1E-16 101.1 5.5 56 179-234 8-65 (70)
180 2k2m_A EPS8-like protein 1; al 99.3 3.1E-12 1.1E-16 100.6 5.2 54 179-233 9-63 (68)
181 1x6g_A Megakaryocyte-associate 99.3 4.5E-12 1.6E-16 103.2 6.2 55 179-233 18-75 (81)
182 2e5k_A Suppressor of T-cell re 99.3 3.4E-12 1.2E-16 107.3 5.5 57 179-235 17-79 (94)
183 2yuq_A Tyrosine-protein kinase 99.3 4.4E-12 1.5E-16 104.4 5.6 55 179-233 20-75 (85)
184 1mv3_A MYC box dependent inter 99.3 7.1E-11 2.4E-15 113.1 14.5 57 177-233 141-212 (213)
185 1bb9_A Amphiphysin 2; transfer 99.2 2.3E-12 7.8E-17 112.1 3.6 56 178-233 44-114 (115)
186 1wxu_A Peroxisomal biogenesis 99.2 2.9E-12 9.9E-17 107.4 3.9 58 178-235 17-79 (93)
187 3o5z_A Phosphatidylinositol 3- 99.2 2.1E-12 7.2E-17 107.4 2.7 56 178-233 11-83 (90)
188 2m0y_A Dedicator of cytokinesi 99.2 2.4E-12 8E-17 103.1 2.8 55 179-234 12-69 (74)
189 2kym_A BUD emergence protein 1 99.2 6.3E-12 2.1E-16 110.3 5.2 56 179-234 4-62 (120)
190 3reb_B Tyrosine-protein kinase 99.2 4.7E-12 1.6E-16 105.5 3.9 56 179-235 4-61 (90)
191 3i5r_A Phosphatidylinositol 3- 99.2 2.3E-12 7.8E-17 105.6 1.8 57 178-234 5-78 (83)
192 2yt6_A Adult MALE urinary blad 99.2 2E-11 6.7E-16 105.6 7.7 57 178-234 27-85 (109)
193 3a98_A DOCK2, dedicator of cyt 99.2 5.8E-11 2E-15 112.4 9.9 120 179-330 18-140 (184)
194 1gcq_C VAV proto-oncogene; SH3 99.1 3.1E-11 1E-15 95.4 4.3 45 189-233 21-68 (70)
195 1k1z_A VAV; SH3, proto-oncogen 99.1 3E-11 1E-15 97.6 4.1 55 179-233 16-76 (78)
196 3qwx_X Cell death abnormality 99.1 3.8E-11 1.3E-15 113.0 4.3 55 178-232 118-173 (174)
197 1gri_A Growth factor bound pro 99.0 7.9E-11 2.7E-15 115.0 4.4 57 178-234 158-214 (217)
198 1ng2_A Neutrophil cytosolic fa 99.0 1.4E-10 4.8E-15 110.9 5.4 58 178-235 11-68 (193)
199 1ng2_A Neutrophil cytosolic fa 99.0 1.2E-10 4.1E-15 111.4 4.0 57 179-235 82-138 (193)
200 2eyz_A V-CRK sarcoma virus CT1 99.0 1.2E-10 4.1E-15 119.5 3.7 59 178-236 237-297 (304)
201 2dvj_A V-CRK sarcoma virus CT1 99.0 7.9E-11 2.7E-15 115.9 1.0 60 178-237 136-196 (230)
202 1v1c_A Obscurin; muscle, sarco 99.0 2.9E-10 9.9E-15 86.8 3.7 54 180-233 7-68 (71)
203 1tuc_A Alpha-spectrin; capping 99.0 2.4E-10 8.3E-15 88.1 3.1 44 191-234 2-45 (63)
204 4d8k_A Tyrosine-protein kinase 98.9 3.5E-10 1.2E-14 106.5 4.1 55 179-234 13-69 (175)
205 2jmc_A Spectrin alpha chain, b 98.9 2.8E-10 9.5E-15 91.6 2.4 47 189-235 2-48 (77)
206 2dyb_A Neutrophil cytosol fact 98.9 4E-10 1.4E-14 117.5 4.0 58 178-235 174-231 (341)
207 2h8h_A Proto-oncogene tyrosine 98.9 3.5E-10 1.2E-14 125.6 3.6 55 179-233 86-142 (535)
208 2lqn_A CRK-like protein; SH2, 98.4 1.5E-10 5.2E-15 118.7 0.0 58 178-235 237-296 (303)
209 1gri_A Growth factor bound pro 98.9 7.7E-10 2.6E-14 107.9 3.3 55 179-233 1-56 (217)
210 1u3o_A Huntingtin-associated p 98.8 1.1E-09 3.8E-14 87.0 3.0 52 179-230 18-75 (82)
211 2eyz_A V-CRK sarcoma virus CT1 98.8 1.6E-09 5.6E-14 111.0 4.6 58 178-235 134-192 (304)
212 3qwy_A Cell death abnormality 98.8 4E-10 1.4E-14 115.9 0.0 57 178-234 247-305 (308)
213 2de0_X Alpha-(1,6)-fucosyltran 98.8 1.5E-09 5.3E-14 118.4 4.3 59 178-236 442-502 (526)
214 3qwy_A Cell death abnormality 98.8 2.8E-09 9.7E-14 109.5 4.5 56 178-233 147-203 (308)
215 2lqn_A CRK-like protein; SH2, 98.2 9.8E-10 3.4E-14 112.6 0.0 59 178-236 125-184 (303)
216 1fmk_A C-SRC, P60-SRC, tyrosin 98.7 3.7E-09 1.3E-13 114.8 3.6 55 179-233 3-59 (452)
217 1g2b_A Spectrin alpha chain; c 98.7 7.4E-09 2.5E-13 79.4 3.9 41 179-219 22-62 (62)
218 1k9a_A Carboxyl-terminal SRC k 98.7 6E-09 2.1E-13 113.1 4.5 56 179-234 12-69 (450)
219 1opk_A P150, C-ABL, proto-onco 98.7 1E-08 3.5E-13 112.6 4.6 56 179-234 44-100 (495)
220 3haj_A Human pacsin2 F-BAR; pa 98.6 3E-09 1E-13 116.2 0.0 56 178-233 428-485 (486)
221 4gou_A EHRGS-rhogef; RGS domai 98.6 1.6E-05 5.6E-10 75.8 25.3 172 271-452 189-372 (518)
222 1kjw_A Postsynaptic density pr 98.6 4.6E-09 1.6E-13 106.9 0.6 55 179-233 2-67 (295)
223 1qcf_A Haematopoetic cell kina 98.6 1.6E-08 5.4E-13 109.8 4.7 55 179-234 9-65 (454)
224 3pvl_A Myosin VIIA isoform 1; 98.4 5.3E-08 1.8E-12 109.4 2.7 65 178-242 573-647 (655)
225 2lul_A Tyrosine-protein kinase 98.4 2.6E-06 8.8E-11 78.9 12.9 106 483-593 13-124 (164)
226 4dey_A Voltage-dependent L-typ 98.3 2.2E-07 7.4E-12 94.6 4.2 53 178-230 38-100 (337)
227 1ri9_A FYN-binding protein; SH 98.3 1.3E-07 4.4E-12 77.7 1.6 55 179-233 40-97 (102)
228 2dn6_A KIAA0640 protein; PH do 98.3 7E-06 2.4E-10 70.7 12.7 104 482-597 5-110 (115)
229 1u5d_A SKAP55, SRC kinase-asso 98.2 1.5E-05 5.3E-10 67.5 13.0 101 484-592 2-107 (108)
230 1v89_A Hypothetical protein KI 98.2 1.4E-05 4.9E-10 69.0 12.7 100 483-590 6-112 (118)
231 1btk_A Bruton'S tyrosine kinas 98.2 2.1E-05 7.3E-10 73.0 14.3 105 485-591 3-133 (169)
232 2gtj_A FYN-binding protein; SH 98.2 8.9E-07 3.1E-11 72.1 3.9 55 178-233 28-85 (96)
233 2i5f_A Pleckstrin; PH domain, 98.2 1.3E-05 4.6E-10 68.2 11.7 102 482-589 4-108 (109)
234 1fgy_A GRP1; PH domain, signal 98.2 1.7E-05 5.9E-10 69.5 12.7 96 485-591 5-121 (127)
235 1v88_A Oxysterol binding prote 98.2 9.9E-06 3.4E-10 71.8 11.0 97 483-590 6-124 (130)
236 1pls_A Pleckstrin homology dom 98.2 1.8E-05 6.2E-10 68.0 12.0 100 484-593 4-104 (113)
237 1dyn_A Dynamin; signal transdu 98.1 2.2E-05 7.6E-10 67.5 11.8 95 485-588 12-115 (125)
238 2w2x_D 1-phosphatidylinositol- 98.1 1.5E-05 5.1E-10 70.0 11.1 105 483-592 10-121 (124)
239 2cof_A Protein KIAA1914; PH do 98.1 1.8E-05 6.2E-10 67.4 11.2 95 483-589 6-100 (107)
240 2d9y_A Pleckstrin homology dom 98.1 2.4E-05 8.1E-10 67.5 11.6 102 481-591 7-110 (117)
241 2dtc_A RAL guanine nucleotide 98.1 4E-05 1.4E-09 66.9 12.9 86 500-592 24-114 (126)
242 2yry_A Pleckstrin homology dom 98.1 3.9E-05 1.3E-09 66.7 13.0 102 480-590 17-120 (122)
243 2dhk_A TBC1 domain family memb 98.1 2.1E-05 7.1E-10 68.5 10.9 104 484-601 7-115 (119)
244 1ycs_B 53BP2, P53BP2; ankyrin 98.1 1.2E-06 4.1E-11 86.1 3.1 54 180-233 172-228 (239)
245 1fao_A Dual adaptor of phospho 98.1 1.7E-05 6E-10 69.5 10.3 99 483-593 16-115 (126)
246 1ug1_A KIAA1010 protein; struc 98.1 2.8E-06 9.7E-11 68.1 4.4 55 180-234 19-77 (92)
247 4a6h_A Phosphatidylinositol 4, 98.1 4E-05 1.4E-09 66.8 12.0 104 485-589 6-117 (120)
248 2cod_A Centaurin-delta 1; ARF 98.1 2.1E-05 7.3E-10 67.8 10.2 95 482-592 5-101 (115)
249 1x1g_A Pleckstrin 2; PH domain 98.1 1.4E-05 4.8E-10 70.4 9.2 107 480-590 13-124 (129)
250 2q13_A DCC-interacting protein 98.0 9.6E-05 3.3E-09 78.1 17.2 97 484-592 277-377 (385)
251 1unq_A RAC-alpha serine/threon 98.0 1E-05 3.4E-10 71.0 8.0 107 483-600 6-120 (125)
252 4h8s_A DCC-interacting protein 98.0 0.00015 5.2E-09 77.2 18.8 98 483-592 299-400 (407)
253 1x05_A Pleckstrin; PH domain, 98.0 1.8E-05 6.3E-10 69.7 9.8 105 482-592 15-122 (129)
254 1wi1_A Calcium-dependent activ 98.0 3.5E-05 1.2E-09 67.0 11.0 102 484-590 7-110 (126)
255 1upq_A PEPP1; PH domain, phosp 98.0 4.5E-05 1.5E-09 66.5 12.1 103 481-592 7-111 (123)
256 2dkp_A Pleckstrin homology dom 98.0 4.7E-05 1.6E-09 66.8 11.7 101 481-590 17-119 (128)
257 1x1f_A Signal-transducing adap 98.0 4.2E-05 1.4E-09 69.3 11.2 97 483-590 16-113 (149)
258 2rsg_A Collagen type IV alpha- 98.0 2.4E-05 8.2E-10 64.8 8.8 91 486-589 2-93 (94)
259 3kfv_A Tight junction protein 98.0 2.8E-06 9.6E-11 86.0 3.5 55 178-232 4-73 (308)
260 1eaz_A Tandem PH domain contai 98.0 2.3E-05 7.9E-10 68.5 9.1 105 481-594 10-115 (125)
261 3tsz_A Tight junction protein 98.0 2.7E-06 9.3E-11 89.9 3.5 56 178-233 106-170 (391)
262 3rcp_A Pleckstrin homology dom 98.0 2E-05 6.9E-10 66.4 8.3 93 488-592 2-95 (103)
263 2d9x_A Oxysterol binding prote 98.0 3.7E-05 1.2E-09 66.9 10.2 101 484-596 7-110 (120)
264 1u5f_A SRC-associated adaptor 98.0 5.3E-05 1.8E-09 68.5 11.7 105 482-594 14-123 (148)
265 2xkx_A Disks large homolog 4; 98.0 5.1E-06 1.7E-10 95.1 5.7 56 178-233 427-493 (721)
266 1wg7_A Dedicator of cytokinesi 98.0 3.2E-05 1.1E-09 70.1 10.0 101 481-592 14-126 (150)
267 1wgq_A FYVE, rhogef and PH dom 97.9 0.00011 3.6E-09 62.6 12.4 95 484-589 7-102 (109)
268 2da0_A 130-kDa phosphatidylino 97.9 0.00018 6.1E-09 61.9 13.4 99 483-597 8-108 (114)
269 2p0d_A RHO GTPase-activating p 97.9 0.00019 6.5E-09 63.3 13.8 103 483-592 10-126 (129)
270 1v5u_A SBF1, SET binding facto 97.9 6.7E-05 2.3E-09 64.6 10.4 101 484-590 7-111 (117)
271 2y7b_A Actin-binding protein a 97.9 5.9E-05 2E-09 66.8 9.8 104 484-593 4-131 (134)
272 3ehr_A Osteoclast-stimulating 97.9 6.2E-06 2.1E-10 79.7 3.6 57 178-234 14-70 (222)
273 2coc_A FYVE, rhogef and PH dom 97.8 5.9E-05 2E-09 64.8 9.1 95 487-590 10-106 (112)
274 3shw_A Tight junction protein 97.8 7.5E-06 2.6E-10 87.9 4.0 55 179-233 99-162 (468)
275 2rlo_A Centaurin-gamma 1; spli 97.8 0.00018 6.2E-09 63.2 12.1 107 484-592 3-126 (128)
276 2fjl_A 1-phosphatidylinositol- 97.8 0.00022 7.7E-09 63.6 11.7 100 486-590 2-148 (150)
277 3tvt_A Disks large 1 tumor sup 97.7 1.7E-05 5.7E-10 80.2 3.9 54 178-231 5-69 (292)
278 3aj4_A Pleckstrin homology dom 97.7 0.00039 1.3E-08 59.3 11.8 100 485-590 5-111 (112)
279 1u5e_A SRC-associated adaptor 97.7 0.00037 1.3E-08 67.0 12.5 101 483-591 104-209 (211)
280 1wjm_A Beta-spectrin III; PH d 97.6 0.00032 1.1E-08 61.1 10.4 102 484-592 7-119 (123)
281 3tfm_A Myosin X; split PH doma 97.6 0.00026 9E-09 69.0 9.9 95 483-591 56-156 (228)
282 2dyb_A Neutrophil cytosol fact 97.5 1.7E-06 5.8E-11 90.0 -6.3 52 182-233 270-331 (341)
283 3cxb_B Pleckstrin homology dom 97.5 0.0009 3.1E-08 57.3 11.9 94 487-591 2-102 (112)
284 1v5p_A Pleckstrin homology dom 97.5 0.00056 1.9E-08 60.0 10.5 103 482-590 12-120 (126)
285 2d9v_A Pleckstrin homology dom 97.5 0.0011 3.9E-08 58.3 12.5 103 482-590 5-114 (130)
286 3a8p_A T-lymphoma invasion and 97.4 0.0014 4.9E-08 65.1 13.3 105 483-594 9-128 (263)
287 2r09_A Cytohesin-3; autoinhibi 97.4 0.00091 3.1E-08 69.4 12.2 96 485-591 213-329 (347)
288 1btn_A Beta-spectrin; signal t 97.4 0.00068 2.3E-08 57.0 9.1 82 500-588 23-106 (106)
289 3pe0_A Plectin; cytoskeleton, 97.4 9.4E-05 3.2E-09 74.5 3.9 52 179-233 199-251 (283)
290 3pp2_A RHO GTPase-activating p 97.3 0.0024 8.3E-08 55.7 11.9 100 484-590 7-123 (124)
291 1qqg_A IRS-1, insulin receptor 97.3 0.00042 1.4E-08 69.0 7.7 100 482-593 7-115 (264)
292 2j59_M RHO-GTPase activating p 97.2 0.0015 5.1E-08 60.2 10.5 82 500-591 29-112 (168)
293 3lju_X ARF-GAP with dual PH do 97.0 0.002 6.9E-08 67.8 9.5 101 482-591 266-373 (386)
294 2rov_A RHO-associated protein 96.9 0.0027 9.2E-08 54.8 8.4 102 487-589 3-114 (117)
295 1dro_A Beta-spectrin; cytoskel 96.9 0.0018 6.2E-08 56.2 7.2 100 485-591 8-120 (122)
296 3r6n_A Desmoplakin; spectrin r 96.6 0.0034 1.2E-07 67.0 7.5 52 179-233 284-336 (450)
297 3tca_A Amyloid beta A4 precurs 96.4 0.0055 1.9E-07 61.7 7.5 102 486-589 169-275 (291)
298 3hk0_A Growth factor receptor- 96.3 0.019 6.4E-07 56.4 10.5 102 486-589 133-239 (256)
299 1w1g_A HPDK1, 3-phosphoinositi 96.1 0.15 5.1E-06 45.3 14.3 96 481-594 48-143 (151)
300 2d9w_A Docking protein 2; PH d 95.9 0.1 3.4E-06 44.8 11.6 99 484-588 11-119 (127)
301 4gmv_A RAS-associated and plec 95.7 0.025 8.6E-07 56.2 8.1 101 487-589 160-265 (281)
302 3lju_X ARF-GAP with dual PH do 95.3 0.058 2E-06 56.5 9.9 97 486-592 147-248 (386)
303 2ys3_A UNC-112-related protein 94.6 0.08 2.7E-06 46.2 7.2 81 501-589 29-111 (137)
304 1mai_A Phospholipase C delta-1 94.2 0.11 3.7E-06 45.5 7.4 103 487-592 14-123 (131)
305 3a8n_A TIAM-1, T-lymphoma inva 94.1 0.059 2E-06 53.5 5.9 86 500-592 39-126 (279)
306 4ejn_A RAC-alpha serine/threon 94.0 0.16 5.5E-06 54.1 9.6 102 484-592 5-110 (446)
307 2d9z_A Protein kinase C, NU ty 92.6 1.5 5.2E-05 37.6 11.4 103 482-590 5-123 (129)
308 4bbk_A Kindlin-1, fermitin fam 88.8 4.9 0.00017 35.7 11.3 81 502-590 46-129 (165)
309 2adz_A Alpha-1-syntrophin; pro 88.4 1.4 4.7E-05 40.3 7.9 56 529-589 121-176 (178)
310 3hie_A Protein PSL1, exocyst c 87.6 5.3 0.00018 36.0 11.1 83 500-593 64-151 (171)
311 4f7h_A Fermitin family homolog 87.2 2.1 7.1E-05 38.5 8.1 82 502-590 67-150 (173)
312 3a58_A Exocyst complex compone 86.7 5.6 0.00019 39.0 11.4 85 498-593 132-221 (320)
313 2coa_A Protein kinase C, D2 ty 86.3 4 0.00014 34.8 9.0 102 482-589 5-118 (125)
314 2kt8_A Probable surface protei 86.1 0.3 1E-05 38.2 1.9 37 196-233 28-64 (76)
315 2krs_A Probable enterotoxin; a 85.8 0.25 8.4E-06 38.5 1.2 36 197-233 27-62 (74)
316 1z87_A Alpha-1-syntrophin; pro 84.9 2.6 9E-05 41.3 8.4 36 554-589 226-261 (263)
317 2kq8_A Cell WALL hydrolase; GF 83.5 0.14 4.7E-06 39.4 -1.2 37 196-233 27-63 (70)
318 3zvr_A Dynamin-1; hydrolase, D 83.3 40 0.0014 38.1 18.3 92 485-585 540-640 (772)
319 2jmc_A Spectrin alpha chain, b 82.2 0.7 2.4E-05 36.0 2.5 22 179-200 53-74 (77)
320 1wfw_A Kalirin-9A; SH3 domain, 72.2 3.9 0.00013 30.8 3.8 46 183-228 12-63 (74)
321 3h8z_A FragIle X mental retard 71.3 1.3 4.6E-05 38.1 1.3 29 195-223 59-91 (128)
322 3ml4_A Protein DOK-7; tyrosine 64.3 9.4 0.00032 36.0 5.6 94 486-587 10-110 (224)
323 1udl_A Intersectin 2, KIAA1256 59.2 2.6 8.8E-05 34.4 0.7 16 219-234 6-21 (98)
324 3tfm_A Myosin X; split PH doma 54.0 15 0.00052 34.8 5.4 32 554-587 195-226 (228)
325 1v5m_A SH2 and PH domain-conta 51.0 14 0.00047 31.8 3.9 36 554-590 95-130 (136)
326 3npf_A Putative dipeptidyl-pep 46.7 7.5 0.00026 38.9 1.9 35 197-233 37-72 (306)
327 1m3w_A H10H24; four-helix bund 43.2 21 0.00073 21.4 2.7 18 319-336 4-21 (32)
328 3cxl_A N-chimerin; SH2, RHO-GA 38.9 4.4 0.00015 43.2 -1.3 25 208-232 14-40 (463)
329 2y3a_B Phosphatidylinositol 3- 33.0 0.067 2.3E-06 53.7 -15.6 36 180-215 105-143 (302)
330 4hpq_C ATG17, KLTH0D15642P; au 31.5 3.6E+02 0.012 27.8 11.8 39 273-311 195-233 (413)
331 3h41_A NLP/P60 family protein; 29.2 18 0.00063 36.1 1.5 33 198-231 65-106 (311)
332 2hbw_A NLP/P60 protein; NLP/P6 28.0 24 0.00082 33.7 2.0 37 197-233 39-77 (235)
333 3f1i_H Hepatocyte growth facto 27.6 1E+02 0.0036 24.6 5.2 51 282-335 3-57 (98)
334 3v5w_A G-protein coupled recep 26.0 7E+02 0.024 27.6 14.6 101 482-596 556-658 (689)
No 1
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=100.00 E-value=2.1e-73 Score=625.58 Aligned_cols=436 Identities=48% Similarity=0.914 Sum_probs=366.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccccccchhhhhhhhhcCCCccccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQEDTVEDCLAALASGGSKTLRR 257 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~e~~~e~~l~~~~~~~~~~l~~ 257 (630)
...|+|+|||.++.++||+|++||+|.|++..++|||.|+++|+.||||+|||+.+...++..+++......... ..
T Consensus 30 ~~~~~al~~~~~~~~~eL~~~~gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~~---~~ 106 (466)
T 2pz1_A 30 VVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQDEPADDDAPLAGNSGA---ED 106 (466)
T ss_dssp CEEEEESSCBCCCCTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSCC---------------------
T ss_pred ccEEEEccccCCCCCCcCCCCCCCEEEEEEecCCCEEEEEECCcEEEEehhHeeeccCccccCCCCCCCCCcccc---cc
Confidence 478999999999999999999999999999999999999999999999999999987776655544322211110 01
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhc
Q psy1488 258 RTSISLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLD 337 (630)
Q Consensus 258 ~~~~~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~ 337 (630)
.....+.+.+.+|+.+|+||++||++||++|+.+.+.|+.++....++++..++..||+||++|+.+|+.||.+|+.++.
T Consensus 107 ~~~~~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~Le~~~~ 186 (466)
T 2pz1_A 107 GGAEAQSSKDQMRTNVINEILSTERDYIKHLRDICEGYVRQCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFN 186 (466)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHc
Confidence 11233567889999999999999999999999999999999976677899999999999999999999999999999986
Q ss_pred cCCCCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHH
Q psy1488 338 WDAPYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPL 417 (630)
Q Consensus 338 ~~~~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~L 417 (630)
.+.+....||+||+++.+.|++|..||.||+.|...|.++.+++.|..|++.|+..+.+.+++|.+||++|||||+||+|
T Consensus 187 ~~~~~~~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~f~~~~~~~~~~~~l~L~~~Li~PvQRi~rY~L 266 (466)
T 2pz1_A 187 RERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPL 266 (466)
T ss_dssp SSCGGGCCCHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccchHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHHhccHHHHHHHHHHHhhhhccCCHHHHhhhHHHHhhhHHH
Confidence 55555678999999999999999999999999999999998877899999999987778889999999999999999999
Q ss_pred HHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec-
Q psy1488 418 QLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS- 496 (630)
Q Consensus 418 LL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~- 496 (630)
||++|+|+|+.+|+||..|+.|++.|+.++..||+.+++.|+.+++.+++..|.+|++.+|+.++|+||++|.++++..
T Consensus 267 LL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~~~l~~~~r~li~~G~l~~~~~~ 346 (466)
T 2pz1_A 267 QLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQP 346 (466)
T ss_dssp HHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBTCCSSCHHHHCSCEEEEEEEEEECTT
T ss_pred HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccceeEEeeeEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999889899999999999988764
Q ss_pred CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHH
Q psy1488 497 GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLE 576 (630)
Q Consensus 497 ~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ 576 (630)
..+.+++++|||+|+||+|+++..++..|.|+..|+|..+.|.+..++++..++..++++|.|........|+|+|.|++
T Consensus 347 ~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ 426 (466)
T 2pz1_A 347 QAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPE 426 (466)
T ss_dssp TCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHH
T ss_pred CCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHH
Confidence 23467999999999999999876667889999999999999999998876667778899999998766779999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccCHHHHHHHHHHHhh
Q psy1488 577 DKARWLAAFQQERALVEQDREDGLEFAPAAKELARMSAAR 616 (630)
Q Consensus 577 ek~~W~~~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 616 (630)
+|+.|+++|.+++..+..+..++.+++++.+++++++|.|
T Consensus 427 eK~~W~~~i~~a~~~~~~~~~~~~~~~e~~~k~~~~~~~~ 466 (466)
T 2pz1_A 427 QKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASK 466 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTC---------------------
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCcccCHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999875
No 2
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=1.1e-60 Score=513.93 Aligned_cols=392 Identities=44% Similarity=0.797 Sum_probs=336.1
Q ss_pred ccccccchhhhhhhhhcCCCc--ccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHH
Q psy1488 233 RVSQEDTVEDCLAALASGGSK--TLRRRTSISLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQ 310 (630)
Q Consensus 233 ~~s~e~~~e~~l~~~~~~~~~--~l~~~~~~~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~ 310 (630)
+++++++.+++...+..+... .+.+....++.+.+.+|+.+|+||++||++||++|+.+.+.|+.|+....++++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~l~~~~ 82 (402)
T 2dfk_A 3 WVNQEDGVEEGPSDVQNGHLDPNSDCLCLGRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQ 82 (402)
T ss_dssp -------------------------CCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCTTTCCHHH
T ss_pred ccchhcchhhhhhcccccccCCCCcchhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHH
Confidence 466788888887666554322 333555667788999999999999999999999999999999999976567899999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHhhhccCCCCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHH
Q psy1488 311 IQTIFGNLEDILAFQSSFLEDLETKLDWDAPYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEAC 390 (630)
Q Consensus 311 ~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~ 390 (630)
+..||+|+++|+.+|+.||.+|+.+...+.+....||+||+++.+.|++|..||.||+.|...|.++.+++.|..|++.|
T Consensus 83 ~~~iF~ni~~I~~~h~~fL~~Le~~~~~~~~~~~~ig~ifl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~ 162 (402)
T 2dfk_A 83 LKVIFGNIEDIYRFQMGFVRDLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEAC 162 (402)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHCCSSCGGGCCCHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHccCCCchhhHHHHHHHHHhhhHHHHHHHHhhHHHHHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999999999998655555678999999999999999999999999999999988877899999999
Q ss_pred HhhccCCCCCccccchhhhhhhhccHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy1488 391 RLMRGLIEIPLDGYLLTPVQRICKYPLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRV 470 (630)
Q Consensus 391 ~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i 470 (630)
+..+.+.+++|.+||++|||||+||+|||++|+|+|+++|+||..|+.|++.|+.++..+|+.+++.|+.+++.+++..|
T Consensus 163 ~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t~~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i 242 (402)
T 2dfk_A 163 RLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASV 242 (402)
T ss_dssp HHHTTCCSCCHHHHHTHHHHHHHHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred HhhhhcccCCHHHHHhHHHHHHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98777888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccCCccEEEeeeEEEEec-CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCC
Q psy1488 471 EGWEGEDLIETSSQLIHQGEVIRVTS-GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHL 549 (630)
Q Consensus 471 ~~~~~~~L~~~~r~ll~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~ 549 (630)
.||++.+|+.++|+||++|.++++.. ..+..++++|||+|+||+|+++..++..|.|+..|+|..+.|.+.+++++..+
T Consensus 243 ~~~~~~~l~~~~r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~ 322 (402)
T 2dfk_A 243 LDWEGDDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDF 322 (402)
T ss_dssp BTCCSSCGGGTCCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSS
T ss_pred cCCCCccccccccceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCcccc
Confidence 99999889999999999999988764 23457899999999999999876667789999999999999999998876666
Q ss_pred CcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcccCCcccCHHHHHHHHHHHhhhhcCCCCc
Q psy1488 550 GVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDREDGLEFAPAAKELARMSAARCHSSRPPV 624 (630)
Q Consensus 550 g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 624 (630)
+...+++|.|++......|+|+|.|+++|+.|+++|.+++..+..+...+.+++++.++.+++++.+++..+.+-
T Consensus 323 ~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~~~~g~~~~e~~~k~~~~~~~~~~~~~~~~ 397 (402)
T 2dfk_A 323 NVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDEKIGFEISENQKRQAAMTVRKASKQKVTQ 397 (402)
T ss_dssp CCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTCC-----
T ss_pred ccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhhhhcCCccCHHHHHHHHHhhhhhhccCccc
Confidence 777889999998766779999999999999999999999999999999999999999999999988886555443
No 3
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=100.00 E-value=1.4e-51 Score=435.07 Aligned_cols=321 Identities=21% Similarity=0.346 Sum_probs=266.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCC
Q psy1488 262 SLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAP 341 (630)
Q Consensus 262 ~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~ 341 (630)
.+.+.+.+|+.+|+||++||++||++|+.+.+.|+.|+.. .++++.+++..||+|+++|+.+|+.||.+|+.+...+.
T Consensus 12 ~l~~~~~kR~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~-~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~- 89 (346)
T 2z0q_A 12 VLTAKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLK-LSIMTEQELNQIFGTLDSLIPLHEELLSQLRDVRKPDG- 89 (346)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-TTSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCTTS-
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHhccHHHHHHHHHHHHHHHHHHhccCC-
Confidence 4567788999999999999999999999999999999986 57889999999999999999999999999999986433
Q ss_pred CcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHHH
Q psy1488 342 YKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLAE 421 (630)
Q Consensus 342 ~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~ 421 (630)
....||++|+++.+.|++|..||.||+.|...++++.+++.|..|++.|+..+.+.+++|.+||++|||||+||+|||++
T Consensus 90 ~~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LLL~~ 169 (346)
T 2z0q_A 90 STEHVGPILVGWLPCLSSYDSYCSNQVAAKALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLRE 169 (346)
T ss_dssp CCSCCHHHHHHHGGGGGHHHHHHHHHHHHHHHHHHHTTCHHHHCC-------------CTTTGGGHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhhHHHHHHHHHHCHHHHHHHHHHhhcCHHHHHHHHHHHhCccCCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 35789999999999999999999999999999999766668999999998888888899999999999999999999999
Q ss_pred HHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEecCccee
Q psy1488 422 LLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTSGMWTN 501 (630)
Q Consensus 422 Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~~~~~~ 501 (630)
|+|+|+++|+|+..|+.|++.|+.++..||+.+++.|+...+..++....++. .+++.++|.|+++|.+.. .. ..
T Consensus 170 llk~t~~~~~d~~~l~~A~~~~~~v~~~iN~~~~~~e~~~~~~~l~~~~~~~~-~~l~~~~r~li~~G~l~~-~~---~~ 244 (346)
T 2z0q_A 170 ILRHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQK-DSLIDSSRVLCCHGELKN-NR---GV 244 (346)
T ss_dssp HHHTSCTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCSTTCC-CHHHHTCCCEEEEEEEEE-TT---SC
T ss_pred HHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-CccccCCeEEEEeceeEE-CC---Cc
Confidence 99999999999999999999999999999999999998877766554444444 357889999999999874 22 25
Q ss_pred EEEEEEeCCeEEEEEeccCCC-cee-EEEeEeecCcceeeeCCCCCCCCCC---------cccceeEEEEec--CCCeEE
Q psy1488 502 TITLFLFDHQLVYCKRDILKR-NTH-VYKARLNIDTSQIINLPDGKDPHLG---------VTVRHAIKIHCS--DKDKWL 568 (630)
Q Consensus 502 ~~~~fLF~d~Ll~~k~~~~~~-~~~-~~k~~i~L~~~~v~~~~d~~~~~~g---------~~~~~~f~I~~~--~~~~~~ 568 (630)
++++|||+|+||+|+++..+. ..| +|+..|+|..+.|.+.+|++....+ ...+++|.|+.. .....|
T Consensus 245 ~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~ 324 (346)
T 2z0q_A 245 KLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTH 324 (346)
T ss_dssp EEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEE
T ss_pred EEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceE
Confidence 899999999999999863322 234 4789999999999998876421111 235789999874 346789
Q ss_pred EEEeCCHHHHHHHHHHHHHHH
Q psy1488 569 LFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 569 ~l~a~s~~ek~~W~~~L~~a~ 589 (630)
+|+|.|+++|+.|+++|.+|+
T Consensus 325 ~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 325 SLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEECSSHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHhh
Confidence 999999999999999999987
No 4
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=100.00 E-value=1.3e-50 Score=431.59 Aligned_cols=319 Identities=18% Similarity=0.338 Sum_probs=276.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCC
Q psy1488 262 SLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAP 341 (630)
Q Consensus 262 ~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~ 341 (630)
.+.+.+.+|+.+|+||++||++||++|+.+.+.|+.||.. .++++.+++..||+|+++|+.+|+.||..|+.+... ++
T Consensus 14 ~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~-~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~-~~ 91 (368)
T 1xcg_A 14 GLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKK-ENLMPREELARLFPNLPELIEIHNSWCEAMKKLREE-GP 91 (368)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-TTSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHT-CS
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 3456788999999999999999999999999999999986 678999999999999999999999999999998753 34
Q ss_pred CcCcHHHHHHHhcC------CcccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhhc
Q psy1488 342 YKSCIGETFLKHKS------GFRMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICK 414 (630)
Q Consensus 342 ~~~~ig~vf~~~~~------~~~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~r 414 (630)
....||++|+++.. .|++|..||.||+.|...+.++.+. +.|..|++.|+..+.+.+++|.+||++|||||+|
T Consensus 92 ~~~~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~Li~PvQRi~r 171 (368)
T 1xcg_A 92 IIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTK 171 (368)
T ss_dssp SCCCCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHH
T ss_pred CcCcHHHHHHHHccchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCCHHHHHHHHHHHhChhhccCChHHHhhhHhhhhhh
Confidence 45789999999864 4689999999999999999988764 5899999999988888899999999999999999
Q ss_pred cHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----------CCcccCCc
Q psy1488 415 YPLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEG-----------EDLIETSS 483 (630)
Q Consensus 415 Y~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~-----------~~L~~~~r 483 (630)
|+|||++|+|+|+++|+|+..|+.|++.|+.++..||+.++..|+.+++.+++..|.++.. .+|..++|
T Consensus 172 Y~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~pl~~~~~~l~~~~R 251 (368)
T 1xcg_A 172 YPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTR 251 (368)
T ss_dssp HHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHSCSCTTTGGGGGCCGGGS
T ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhcccchhhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999986321 24556789
Q ss_pred cEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCC--------------CceeEEEeEeecCcceeeeCCCCCCCCC
Q psy1488 484 QLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILK--------------RNTHVYKARLNIDTSQIINLPDGKDPHL 549 (630)
Q Consensus 484 ~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~--------------~~~~~~k~~i~L~~~~v~~~~d~~~~~~ 549 (630)
+||++|.+.+...+.+..++++|||+|+||+|+++..+ ...|.|+..|+|..+.|.++.++
T Consensus 252 ~li~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~----- 326 (368)
T 1xcg_A 252 KMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD----- 326 (368)
T ss_dssp CEEEEEEEEECCSSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC-----
T ss_pred eEEeecceEeeecCCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccCC-----
Confidence 99999999864444446799999999999999986321 23578899999999998876421
Q ss_pred CcccceeEEEEec---CCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 550 GVTVRHAIKIHCS---DKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 550 g~~~~~~f~I~~~---~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
+++|.|++. +....|+|+|.|+++|+.|+++|.+|++.
T Consensus 327 ----~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 327 ----KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp ----SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 467887764 33578999999999999999999999875
No 5
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=100.00 E-value=8.6e-50 Score=430.39 Aligned_cols=317 Identities=24% Similarity=0.386 Sum_probs=279.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCCc
Q psy1488 264 LSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPYK 343 (630)
Q Consensus 264 ~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~~ 343 (630)
.+.+.+|+.+|+||++||++||++|+.+.+.|+.||. .+++++++..||+|+++|+.+|+.||.+|+.+...+ ..
T Consensus 20 ~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~---~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~--~~ 94 (406)
T 2vrw_B 20 MTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQ---RFLKPQDMETIFVNIEELFSVHTHFLKELKDALAGP--GA 94 (406)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHT---TTSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSG--GG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCC--Cc
Confidence 4567899999999999999999999999999999996 378999999999999999999999999999998632 24
Q ss_pred CcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHHHH
Q psy1488 344 SCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLAEL 422 (630)
Q Consensus 344 ~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~L 422 (630)
..||++|+++.+.|++|..||.||+.|...++++.+. +.|..|++.++..+.+.+++|.+||++|||||+||+|||++|
T Consensus 95 ~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~l 174 (406)
T 2vrw_B 95 TTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQEL 174 (406)
T ss_dssp TTHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCHHHHTTHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHhhccccCCcchHHHhhhHHHHHhhHHHHHHHH
Confidence 6799999999999999999999999999999998765 489999999988877888999999999999999999999999
Q ss_pred HhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec-Cccee
Q psy1488 423 LKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS-GMWTN 501 (630)
Q Consensus 423 lk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~-~~~~~ 501 (630)
+|+| ++|+|+..|+.|++.|++++..+|+.+++.|+..++.+++..|++|.+ +|...+ +++++|.+..... +....
T Consensus 175 lk~t-~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~-~l~~~g-rli~~G~l~~~~~~~~~~~ 251 (406)
T 2vrw_B 175 VKHT-QDATEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQ-SLANYG-RPKIDGELKITSVERRSKT 251 (406)
T ss_dssp HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEESCSS-CGGGGC-SEEEEEEEEEECSSCCSCE
T ss_pred HHhC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-cccccC-cccccccEEEEecCCCccc
Confidence 9999 899999999999999999999999999999999999999999999976 465554 5999999986642 33457
Q ss_pred EEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHH
Q psy1488 502 TITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARW 581 (630)
Q Consensus 502 ~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W 581 (630)
++++|||+|+||+|+++ +..|.|+..|+|..+.|.+.++++. .+...+++|.|........|+|.|.|+++|+.|
T Consensus 252 ~~~~fLF~d~Ll~~k~k---~~~y~~k~~i~l~~~~v~~~~~~~~--~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W 326 (406)
T 2vrw_B 252 DRYAFLLDKALLICKRR---GDSYDLKASVNLHSFQVRDDSSGER--DNKKWSHMFLLIEDQGAQGYELFFKTRELKKKW 326 (406)
T ss_dssp EEEEEEESSEEEEEEEE---TTEEEEEEEEETTTEEEEC----------CTTCEEEEEEETTCSCEEEEEESSHHHHHHH
T ss_pred eEEEEecCCEEEEEEec---CCceEEEEEecccceeeeecCCCCc--cCCccceeeEEEecCCCceEEEeCCCHHHHHHH
Confidence 99999999999999986 5789999999999999988776542 122357899998865667899999999999999
Q ss_pred HHHHHHHHHHHh
Q psy1488 582 LAAFQQERALVE 593 (630)
Q Consensus 582 ~~~L~~a~~~~~ 593 (630)
+++|.+++..+.
T Consensus 327 ~~~i~~ai~~~~ 338 (406)
T 2vrw_B 327 MEQFEMAISNIY 338 (406)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHhhhh
Confidence 999999998865
No 6
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=100.00 E-value=4.2e-51 Score=419.57 Aligned_cols=278 Identities=24% Similarity=0.449 Sum_probs=244.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccccccchhhhhhhhhcCCCcccccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQEDTVEDCLAALASGGSKTLRRR 258 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~e~~~e~~l~~~~~~~~~~l~~~ 258 (630)
..|+|+|||.++.++||+|++||+|.|++..++|||.|+.+|+.||||++||+.+........++.. . .
T Consensus 3 ~~~~a~~~~~~~~~~el~~~~gd~i~v~~~~~~~w~~~~~~g~~G~~P~~~v~~~~~~~~~~q~~~~------~-----~ 71 (283)
T 3jv3_A 3 CQVIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKLTTDMDPSQQWCSD------L-----H 71 (283)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEECCSTTEEEEEETTEEEEEEGGGEEEGGGSCHHHHHCTT------C-----T
T ss_pred eEEEEccccCCCCCCcCCCCCCCEEEEEecCCCCEEEEEECCCCCcCCCccccccCccccccccccc------h-----h
Confidence 5789999999999999999999999999999999999999999999999999877554443332211 0 1
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhcc
Q psy1488 259 TSISLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDW 338 (630)
Q Consensus 259 ~~~~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~ 338 (630)
....+.+.+.+|+.+|+||++||++||++|+.+.+.|+.++.. .++++..++..||+|+++|+.+|+.||..|+.+...
T Consensus 72 ~~~~l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~-~~~l~~~~~~~iF~ni~~i~~~~~~fl~~L~~~~~~ 150 (283)
T 3jv3_A 72 LLDMLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLTE-SELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKM 150 (283)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHT-TCSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccc-cCCCCHHHHHHHccCHHHHHHHHHHHHHHHHHHHhc
Confidence 1123456788999999999999999999999999999999975 678999999999999999999999999999988642
Q ss_pred --CCCCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCC-chHHHHHHHHhhccCCCCCccccchhhhhhhhcc
Q psy1488 339 --DAPYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHN-NYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKY 415 (630)
Q Consensus 339 --~~~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~-~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 415 (630)
+......||++|+++.+.|++|..||.||+.+...+..+.+.+ .|..|++.|+..+.+.+++|.+||++|||||+||
T Consensus 151 ~~~~~~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY 230 (283)
T 3jv3_A 151 SGEKMPVKMIGDILSAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRY 230 (283)
T ss_dssp HCTTCCCCCCHHHHHHHGGGGTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHH
T ss_pred cccCCchhHHHHHHHHHHhhchhHHHHHcCHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhhhhHHHhcch
Confidence 2223467999999999999999999999999999999877664 7999999999988888999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1488 416 PLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQ 468 (630)
Q Consensus 416 ~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~ 468 (630)
+|||++|+|+|+.+|+|+..|+.|++.|+.++..+|+.+++.|+.++|.+||.
T Consensus 231 ~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~iNe~~r~~e~~~~l~~iQs 283 (283)
T 3jv3_A 231 PLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQA 283 (283)
T ss_dssp HHHHHHHHTTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC-----
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHhHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999988763
No 7
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=100.00 E-value=1.4e-50 Score=428.85 Aligned_cols=310 Identities=20% Similarity=0.370 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccC-C-CCcCcHH
Q psy1488 270 RSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWD-A-PYKSCIG 347 (630)
Q Consensus 270 R~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~-~-~~~~~ig 347 (630)
+++||+||++||++||++|+.+.+.|+.||....++++..++..||+|+++|+.+|+.||.+|+.+.... . .....||
T Consensus 4 y~~vi~Eli~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~~~~~ig 83 (354)
T 1dbh_A 4 YYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVG 83 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCTTSSSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhccccCCccchHH
Confidence 5689999999999999999999999999998755689999999999999999999999999999887421 1 1126799
Q ss_pred HHHHHhcC--CcccHHHHhhCh--HHHHHHHHHHHhCCchHHHHHHH-HhhccCCCCCccccchhhhhhhhccHHHHHHH
Q psy1488 348 ETFLKHKS--GFRMYSEYCNSH--PMAIATLQELYQHNNYSKFFEAC-RLMRGLIEIPLDGYLLTPVQRICKYPLQLAEL 422 (630)
Q Consensus 348 ~vf~~~~~--~~~~Y~~Y~~~~--~~a~~~l~~~~~~~~f~~fl~~~-~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~L 422 (630)
++|+++.+ .|++|..||.|| +.|...+.++.+++.|..|++.+ +..+.+.+++|.+||++|||||+||+|||++|
T Consensus 84 ~~f~~~~~~~~f~~Y~~Y~~n~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~~L~~~Li~PvQRi~rY~LLL~~l 163 (354)
T 1dbh_A 84 SCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQL 163 (354)
T ss_dssp HHHHHHHHTTTTHHHHHHHHHHTSTTHHHHHHHHHHSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHhhhhHHHHHHHhccchHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhchHHHHHHHH
Confidence 99999998 799999999999 66679999998888999999874 33444567899999999999999999999999
Q ss_pred HhcCCCCCccHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHhhcCCCCCCccc
Q psy1488 423 LKYTKTDHPDYVKITEALEAMRDVAMLINE----------------------RKRRMESLEKLAAWQQRVEGWEGEDLIE 480 (630)
Q Consensus 423 lk~t~~~~~d~~~L~~A~~~i~~l~~~vne----------------------~~~~~e~~~~l~~l~~~i~~~~~~~L~~ 480 (630)
+|+||. |+|+..|++|++.|+.++..||+ .+++.++.+++.+++..|.||++.+|..
T Consensus 164 lk~t~~-~~d~~~L~~Al~~~~~v~~~in~~~~~~~~~r~~~e~~~~~~~ne~~r~~e~~~~l~~lq~~i~~~~~~~l~~ 242 (354)
T 1dbh_A 164 EEKSED-QEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWEGKDIGQ 242 (354)
T ss_dssp HHHCSC-HHHHHHHHHHHHHTHHHHHHHHHHHHSHHHHHHHHHTC-------------CTHHHHHHHTTEESCCSSCGGG
T ss_pred HhcCCC-CccHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCccccc
Confidence 999984 99999999999999999998876 7778888899999999999999988999
Q ss_pred CCccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccC-------CCceeEEEeEeecCcceeeeCCCCCCCCCCccc
Q psy1488 481 TSSQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDIL-------KRNTHVYKARLNIDTSQIINLPDGKDPHLGVTV 553 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~-------~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~ 553 (630)
++|+||++|.+.+. | ..+++++|||+|+||+|+++.. +...|.|+..|+|..+.|.+.+|++ ..
T Consensus 243 ~~r~li~eG~l~~~--g-~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~------~~ 313 (354)
T 1dbh_A 243 CCNEFIMEGTLTRV--G-AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN------EY 313 (354)
T ss_dssp TCCCEEEEEEEEET--T-CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS------SC
T ss_pred ccceEEEEeeEEEE--e-cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc------cc
Confidence 99999999999865 3 3568999999999999998632 3467999999999999999987754 35
Q ss_pred ceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 554 RHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 554 ~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
+++|.|++.. ...|+|+|.|+++|+.|+++|.+++.
T Consensus 314 ~~~F~i~~~~-~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 314 KHAFEIILKD-ENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp CSEEEECCTT-SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CccEEEecCC-CCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 7899998754 46799999999999999999998864
No 8
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=100.00 E-value=2e-49 Score=429.33 Aligned_cols=320 Identities=18% Similarity=0.344 Sum_probs=279.6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCC
Q psy1488 263 LLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPY 342 (630)
Q Consensus 263 l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~ 342 (630)
+.+.+.+|+++|+||++||+.||++|+.+.+.|+.+|.. .++++..++..||+|+++|+.+|+.||..|+.+... .+.
T Consensus 57 l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~-~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~-~~~ 134 (418)
T 3t06_A 57 LTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKK-ENLMPREELARLFPNLPELIEIHNSWCEAMKKLREE-GPI 134 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-TTSSCHHHHHHHSSSHHHHHHHHHHHHHHHHHHGGG-CSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 356688999999999999999999999999999999986 678999999999999999999999999999998853 344
Q ss_pred cCcHHHHHHHhcCCc------ccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhhcc
Q psy1488 343 KSCIGETFLKHKSGF------RMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKY 415 (630)
Q Consensus 343 ~~~ig~vf~~~~~~~------~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 415 (630)
...||+||+++.+.| ++|..||.||+.|...+.++.++ +.|..|++.++..+.+.+++|.+||++|||||+||
T Consensus 135 ~~~ig~ifl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 214 (418)
T 3t06_A 135 IKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKY 214 (418)
T ss_dssp CCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHH
T ss_pred cCcHHHHHHHhcchhhhHHHhhhhHHHhhhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccccCCHHHHHhhHHHHHHHH
Confidence 678999999998864 79999999999999999988764 48999999999988888999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----------CCcccCCcc
Q psy1488 416 PLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEG-----------EDLIETSSQ 484 (630)
Q Consensus 416 ~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~-----------~~L~~~~r~ 484 (630)
+|||++|+|+|+.+|+||..|+.|++.|+.++..||+.++..++..++..++.+|.++.. .++..++|+
T Consensus 215 ~LLL~~llk~t~~~~~d~~~L~~A~~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 294 (418)
T 3t06_A 215 PLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSLDLTTRK 294 (418)
T ss_dssp HHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEECCTTSSCSCTTTTTTSSCCGGGSC
T ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccccccchhhcccccccce
Confidence 999999999999999999999999999999999999999999999999999999987643 234556799
Q ss_pred EEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccC--------------CCceeEEEeEeecCcceeeeCCCCCCCCCC
Q psy1488 485 LIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDIL--------------KRNTHVYKARLNIDTSQIINLPDGKDPHLG 550 (630)
Q Consensus 485 ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~--------------~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g 550 (630)
||++|.+.+...+.+..++++|||+|+||+|+++.. ....|.|+..|+|..+.|.++.+.
T Consensus 295 li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~------ 368 (418)
T 3t06_A 295 MIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD------ 368 (418)
T ss_dssp EEEEEEEEECCBTTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC------
T ss_pred eEEeceEEEEeCCCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccccc------
Confidence 999999987665555679999999999999997632 123678899999999999876432
Q ss_pred cccceeEEEEecC---CCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 551 VTVRHAIKIHCSD---KDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 551 ~~~~~~f~I~~~~---~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
.++|.|++.. ..+.|+|+|.|.++|+.|+++|++++....
T Consensus 369 ---~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~ 411 (418)
T 3t06_A 369 ---KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAH 411 (418)
T ss_dssp ---SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred ---CceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 4578888753 237999999999999999999999997654
No 9
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-50 Score=434.14 Aligned_cols=344 Identities=18% Similarity=0.260 Sum_probs=266.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhh--------cCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhh
Q psy1488 265 SNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRR--------RNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKL 336 (630)
Q Consensus 265 ~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~--------~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~ 336 (630)
..+.+|+.||+||++||+.||++|+.|.+.|+.+|.. ..+.++..++..||+||++|+.+|+.||.+|+.++
T Consensus 18 e~~~kr~~ii~ELl~TE~~Yv~~L~~l~~~f~~pl~~~l~~~~~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~~~ 97 (434)
T 3mpx_A 18 GGQSRALVIAQELLSSEKAYVEMLQHLNLDFHGAVMRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEERL 97 (434)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999864 13577789999999999999999999999999998
Q ss_pred ccCCCCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCC-chHHHHHHHHhhccCCCCCccccchhhhhhhhcc
Q psy1488 337 DWDAPYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHN-NYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKY 415 (630)
Q Consensus 337 ~~~~~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~-~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 415 (630)
..+. ....||++|+++.+.|++|..||.||+.|...+.++.+++ .|..|++.++..+.+.+++|.+||++|||||+||
T Consensus 98 ~~~~-~~~~ig~ifl~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY 176 (434)
T 3mpx_A 98 SNWE-SQQKVADVFLAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKHRLLRVVQRLFQY 176 (434)
T ss_dssp HTTT-TCCCCTHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTC------CHHHHHHHHHHHHHHH
T ss_pred Hhcc-CcccHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHHHHhChHHHHHHHHHHcCcccCCCCHHHHHhhhHHhhhHH
Confidence 5432 3578999999999999999999999999999999977665 7999999999888888999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEe
Q psy1488 416 PLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVT 495 (630)
Q Consensus 416 ~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~ 495 (630)
+|||++|+|+|+++|+||..|+.|++.|+.++..+|+.+++.++.+++.+++..|.++ .+|+.++|.||++|.++++.
T Consensus 177 ~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~l~~~i~~~--~~l~~~~r~li~~g~l~~~~ 254 (434)
T 3mpx_A 177 QVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHIEHSVRGQ--GDLLQPGREFLKEGTLMKVT 254 (434)
T ss_dssp HHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHEETC--CCCCCTTCCEEECCEEEEEE
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cccccCCcceEecceEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 36889999999999998776
Q ss_pred cCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCH
Q psy1488 496 SGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSL 575 (630)
Q Consensus 496 ~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~ 575 (630)
.+ ..+++++|||+|+||+|+++ +...|.|+..|+|..+.|.+..++ ..+++|.|.. ....|+|+|.|+
T Consensus 255 ~~-~~~~r~~fLF~d~Ll~~k~~--~~~~y~~k~~i~L~~l~v~~~~~~-------~~~~~f~i~~--~~~~~~l~a~s~ 322 (434)
T 3mpx_A 255 GK-NRRPRHLFLMNDVLLYTYPQ--KDGKYRLKNTLAVANMKVSRPVME-------KVPYALKIET--SESCLMLSASSC 322 (434)
T ss_dssp TT-EEEEEEEEEESSEEEEEEEC--TTSCEEEEEEEEC-----CCCCCT-------TSCSEEEEEC--SSCEEEEECSSH
T ss_pred CC-CceEEEEEEECCEEEEEEec--CCCeEEEEEEEEcCCcEEEecCCC-------CCCeeEEEec--CCeEEEEecCCH
Confidence 43 45789999999999999986 356799999999999999765443 3478898854 455899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccC-----Cc---------ccCHHHHHHHHHHHhhhhcCCCC
Q psy1488 576 EDKARWLAAFQQERALVEQDRED-----GL---------EFAPAAKELARMSAARCHSSRPP 623 (630)
Q Consensus 576 ~ek~~W~~~L~~a~~~~~~~~~~-----~~---------~~~~~~~~~~~~~a~~~~~~~~~ 623 (630)
++|+.|+++|.+++......... .. ....+..|+.+.++..|+.|+.+
T Consensus 323 ~ek~~W~~~i~~ai~e~~~~~~~~~f~~~~e~~~~~~~~~~~~~p~w~~~~~~~~c~~c~~~ 384 (434)
T 3mpx_A 323 AERDEWYGCLSRALPEDYKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCD 384 (434)
T ss_dssp HHHHHHHHHHHHC-------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCccchhhcccCccccCCCcCCCcccCCcCCCcCCC
Confidence 99999999999999764322110 01 11234568888888888877654
No 10
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=100.00 E-value=6.3e-49 Score=419.89 Aligned_cols=316 Identities=21% Similarity=0.366 Sum_probs=273.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCC
Q psy1488 262 SLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAP 341 (630)
Q Consensus 262 ~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~ 341 (630)
.+.+.+.+|+++|+||++||++||++|+.+.+.|+.++.. .++++.+++..||+|+++|+.+|+.||..|+.+...+++
T Consensus 20 ~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~-~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~ 98 (377)
T 3p6a_A 20 SLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAE-CLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGY 98 (377)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HTSSCHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCCCHHHHHHHHccHHHHHHHHHHHHHHHHHHHhccCC
Confidence 3467789999999999999999999999999999999975 578999999999999999999999999999988765555
Q ss_pred CcCcHHHHHHHhcCC-----c-ccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhhc
Q psy1488 342 YKSCIGETFLKHKSG-----F-RMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICK 414 (630)
Q Consensus 342 ~~~~ig~vf~~~~~~-----~-~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~r 414 (630)
....||+||+++.+. | ++|..||.||+.|...+.++.++ +.|..|++.|+..+.+.+++|.+||++|||||+|
T Consensus 99 ~~~~ig~~fl~~~~~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~r 178 (377)
T 3p6a_A 99 LIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTK 178 (377)
T ss_dssp CCCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHH
T ss_pred CCCcHHHHHHHHhcchhhHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhh
Confidence 567899999999884 4 69999999999999999987655 4899999999998888899999999999999999
Q ss_pred cHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------------CCCCCcccC
Q psy1488 415 YPLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEG-------------WEGEDLIET 481 (630)
Q Consensus 415 Y~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~-------------~~~~~L~~~ 481 (630)
|+|||++|+|+|++ |+|+..|+.|++.|+.++..+|+.+++.|+..++.+++.+|++ |.+ +..+
T Consensus 179 Y~LLL~~llk~t~~-~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~iq~~l~~~~~~~~~~~~~~~~~~--l~~~ 255 (377)
T 3p6a_A 179 YPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKN--LDIT 255 (377)
T ss_dssp HHHHHHHHHHTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCGGGSSSTT--CCCT
T ss_pred HHHHHHHHHhhCCC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccchhhhhcc--cccc
Confidence 99999999999986 8999999999999999999999999999999999999999864 443 3446
Q ss_pred CccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEe-----------------EeecCcceeeeCCCC
Q psy1488 482 SSQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKA-----------------RLNIDTSQIINLPDG 544 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~-----------------~i~L~~~~v~~~~d~ 544 (630)
+|+||++|.++....+.+.+++++|||+|+||+|+++ ..+|.|+. .|+|..+.|.++.++
T Consensus 256 ~r~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~k---~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~ 332 (377)
T 3p6a_A 256 KKKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQ---DERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD 332 (377)
T ss_dssp TSCEEEEEEEEEESSSSCEEEEEEEEESSEEEEEEEE---TTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC
T ss_pred cceEEEECCcEEEecCCCeEEEEEEeeCCEEEEEEEc---CceeEEeecccccccCccccCCCCCeEechhhhccccccc
Confidence 7999999999876555566799999999999999976 35566654 589999998885443
Q ss_pred CCCCCCcccceeEEEEec--CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 545 KDPHLGVTVRHAIKIHCS--DKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 545 ~~~~~g~~~~~~f~I~~~--~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
. .+|.+++. .....|+|.|.|.+||+.|+++|++|++.+.
T Consensus 333 ~---------~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~k 374 (377)
T 3p6a_A 333 H---------KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 374 (377)
T ss_dssp T---------TEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTCC
T ss_pred c---------ceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 2 34555554 3457899999999999999999999998654
No 11
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=100.00 E-value=2.1e-48 Score=416.74 Aligned_cols=327 Identities=21% Similarity=0.363 Sum_probs=274.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhc-c-CC
Q psy1488 263 LLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLD-W-DA 340 (630)
Q Consensus 263 l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~-~-~~ 340 (630)
+.+.+.+|+.+|+||++||++||++|+.+.+.|+.||.. .++++.+++..||+|+++|+.+| .||.+|+.++. + ..
T Consensus 18 l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~~l~~-~~~l~~~~~~~iF~ni~~I~~~h-~fL~~l~~~~~~~~~~ 95 (385)
T 1txd_A 18 LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSR-EGILSPSELRKIFSNLEDILQLH-IGLNEQMKAVRKRNET 95 (385)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HTCSCHHHHHHHHTTHHHHHHHH-HHHHHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHhhcC
Confidence 456788999999999999999999999999999999976 57899999999999999999999 99999999762 1 23
Q ss_pred CCcCcHHHHHHHhcC-----Cc-ccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhh
Q psy1488 341 PYKSCIGETFLKHKS-----GF-RMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRIC 413 (630)
Q Consensus 341 ~~~~~ig~vf~~~~~-----~~-~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~ 413 (630)
+....||++|+++.+ .| ++|..||.||+.|...+.++.+. +.|..|++.|+..+.+.+++|.+||++|||||+
T Consensus 96 ~~~~~ig~~fl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~~~Li~PvQRi~ 175 (385)
T 1txd_A 96 SVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLT 175 (385)
T ss_dssp CCCCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHHSGGGTTCCHHHHTTHHHHHHH
T ss_pred CCcccHHHHHHHHccchhHHHHHHHHHHHHHchHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCChHHHhhhHHhHhh
Confidence 345789999999975 35 79999999999999999987654 589999999998888889999999999999999
Q ss_pred ccHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CC---------CCcccCC
Q psy1488 414 KYPLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGW--EG---------EDLIETS 482 (630)
Q Consensus 414 rY~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~--~~---------~~L~~~~ 482 (630)
||+|||++|+|+|+++ +|+..|++|++.|+.++..||+.+++.|+..++.+++.+|++. .+ .++..++
T Consensus 176 rY~LLL~~llk~t~~~-~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~~~~~~~p~~~~~~~l~~~~ 254 (385)
T 1txd_A 176 KYPLLLDNIAKYTEWP-TEREKVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSSLKLSEYPNVEELRNLDLTK 254 (385)
T ss_dssp HHHHHHHHHHHTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC-------CHHHHTCCGGG
T ss_pred hHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccchhhhhhccccc
Confidence 9999999999999986 8999999999999999999999999999999999999999742 11 1345578
Q ss_pred ccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCC--------------CceeEEEeEeecCcceeeeCCCCCCCC
Q psy1488 483 SQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILK--------------RNTHVYKARLNIDTSQIINLPDGKDPH 548 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~--------------~~~~~~k~~i~L~~~~v~~~~d~~~~~ 548 (630)
|+||++|.+.....+.+..++++|||+|+||+|+++..+ ...|.|+..|+|..+.|.++.++.
T Consensus 255 R~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d~--- 331 (385)
T 1txd_A 255 RKMIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDN--- 331 (385)
T ss_dssp SCEEEEEEEEEESSSSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-C---
T ss_pred ceEEEECcEEEEcCCCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccCC---
Confidence 999999999865444446789999999999999986321 234567889999999988764321
Q ss_pred CCcccceeEEEEec-CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcccCCc
Q psy1488 549 LGVTVRHAIKIHCS-DKDKWLLFCCRSLEDKARWLAAFQQERALVEQDREDGL 600 (630)
Q Consensus 549 ~g~~~~~~f~I~~~-~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~~~~ 600 (630)
++.|.|... .....|+|+|.|+++|+.|+++|.+++..+.....++.
T Consensus 332 -----~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~~~~~~ 379 (385)
T 1txd_A 332 -----KALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSVDGG 379 (385)
T ss_dssp -----CEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred -----ceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 345666543 23578999999999999999999999999887765543
No 12
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=100.00 E-value=1.4e-48 Score=433.12 Aligned_cols=316 Identities=21% Similarity=0.366 Sum_probs=271.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCC
Q psy1488 263 LLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPY 342 (630)
Q Consensus 263 l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~ 342 (630)
+.+.+.+|++||+||++||+.||++|+.|.+.|+.+|.. .++++..++..||+||++|+.+|+.||..|+++...+.+.
T Consensus 174 l~~~e~kRq~vi~ELi~TE~~YV~~L~~l~~~y~~pl~~-~~~l~~~~~~~IF~nie~I~~~h~~fL~~L~~~~~~~~~~ 252 (536)
T 3odw_A 174 LPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAE-CLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYL 252 (536)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-TTSSCHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 356788999999999999999999999999999999976 6789999999999999999999999999999987644555
Q ss_pred cCcHHHHHHHhcCC-----c-ccHHHHhhChHHHHHHHHHHHhCC-chHHHHHHHHhhccCCCCCccccchhhhhhhhcc
Q psy1488 343 KSCIGETFLKHKSG-----F-RMYSEYCNSHPMAIATLQELYQHN-NYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKY 415 (630)
Q Consensus 343 ~~~ig~vf~~~~~~-----~-~~Y~~Y~~~~~~a~~~l~~~~~~~-~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 415 (630)
...||+||+++++. | ++|..||.||+.|...|.++++++ .|..|++.|+..+.+.+++|.+||++|||||+||
T Consensus 253 ~~~Igdifl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY 332 (536)
T 3odw_A 253 IEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTKY 332 (536)
T ss_dssp CCCCHHHHHHHHSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHH
T ss_pred cccHHHHHHHHcchhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhCHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHH
Confidence 67899999999874 4 799999999999999999877655 8999999999988888999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------------CCCCCcccCC
Q psy1488 416 PLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEG-------------WEGEDLIETS 482 (630)
Q Consensus 416 ~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~-------------~~~~~L~~~~ 482 (630)
+|||++|+|+|+. |+||..|+.|++.|+.++..||+.+++.|+..+|.+++.+|.+ |.+ +..++
T Consensus 333 ~LLL~~LlK~T~~-~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~kL~~iq~~L~~~~~~~~~~~~i~~~~~--ldl~~ 409 (536)
T 3odw_A 333 PLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKN--LDITK 409 (536)
T ss_dssp HHHHHHHHTTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECTTTTTC---CCTTSSS--CCCTT
T ss_pred HHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhcc--ccccc
Confidence 9999999999986 8999999999999999999999999999999999999999974 322 33468
Q ss_pred ccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEe-----------------EeecCcceeeeCCCCC
Q psy1488 483 SQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKA-----------------RLNIDTSQIINLPDGK 545 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~-----------------~i~L~~~~v~~~~d~~ 545 (630)
|+||++|.+.+.....+.+++++|||+|+||+|+++ ...|.|+. .|+|..+.|.++.+.
T Consensus 410 R~LI~eG~l~~~~~~~k~~~r~~fLF~D~LL~~k~k---~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d- 485 (536)
T 3odw_A 410 KKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQ---DERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD- 485 (536)
T ss_dssp SCEEEEEEEEEESCC---CEEEEEEESSEEEEEEEE---TTEEECCCC------------CCCSEEEGGGEEEEECTTC-
T ss_pred ceeeeecceEEEecCCCeeEEEEEEcCCEEEEEEEc---CCeEEEeecccccccccccccccCceeecccceeeccccc-
Confidence 999999999876544456799999999999999986 33555544 599999998886543
Q ss_pred CCCCCcccceeEEEEec--CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 546 DPHLGVTVRHAIKIHCS--DKDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 546 ~~~~g~~~~~~f~I~~~--~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
..+|.++.. .....|+|+|.|.+||+.|+++|++|+..+..
T Consensus 486 --------~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~ 528 (536)
T 3odw_A 486 --------HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKV 528 (536)
T ss_dssp --------TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCC
T ss_pred --------CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCC
Confidence 245666554 34578999999999999999999999987643
No 13
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=1.8e-47 Score=408.30 Aligned_cols=325 Identities=23% Similarity=0.389 Sum_probs=267.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCC--
Q psy1488 264 LSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAP-- 341 (630)
Q Consensus 264 ~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~-- 341 (630)
.+.+.||+.+|+||++||++||++|+.+.+.|+.||.. .++++.+++..||+|+++|+.+|+.||.+|+.+...+..
T Consensus 6 ls~~~kr~~vi~Eli~TE~~Yv~~L~~l~~~y~~pl~~-~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~ 84 (377)
T 1foe_A 6 LSDADKLRKVICELLETERTYVKDLNCLMERYLKPLQK-ETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLE 84 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT-SSSSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSSCGG
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcch
Confidence 34578999999999999999999999999999999975 568899999999999999999999999999998752211
Q ss_pred ----------CcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhh
Q psy1488 342 ----------YKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQR 411 (630)
Q Consensus 342 ----------~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQR 411 (630)
....||++|+++.+.|++|..||.||+.|...+.++.+++.|..|++.++... +.+++|.+||++||||
T Consensus 85 ~~~~~~~~~~~~~~ig~~f~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~f~~fl~~~~~~~-~~~l~L~s~Li~PvQR 163 (377)
T 1foe_A 85 KLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRQ-QHSSTLESYLIKPIQR 163 (377)
T ss_dssp GCCSGGGGHHHHHHHHHHHHHHTTGGGGHHHHHHHTTTHHHHHTTTTTCHHHHHHHHHHCTTC-CGGGSHHHHTTHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHhhcc-ccCcCHHHHhccchhh
Confidence 01369999999999999999999999999999988766668999999987643 5679999999999999
Q ss_pred hhccHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCcccCCccEEEeee
Q psy1488 412 ICKYPLQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAA-WQQRVEGWEGEDLIETSSQLIHQGE 490 (630)
Q Consensus 412 i~rY~LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~-l~~~i~~~~~~~L~~~~r~ll~~G~ 490 (630)
|+||+|||++|+|+|+++|+|+..|+.|++.|+.++..||+.++..|+..++.. +...+.++.........++||++|.
T Consensus 164 i~rY~LLL~~llk~t~~~~~d~~~l~~Al~~~~~v~~~iNe~~r~~e~~~~~~~~l~~~~~~~~~~~~~~~~g~ll~~~~ 243 (377)
T 1foe_A 164 VLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGDLLLHTS 243 (377)
T ss_dssp HTTHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSCSSCCCCGGGEEEEEE
T ss_pred hccHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCccceeeecc
Confidence 999999999999999999999999999999999999999999999998887643 3334444332211224467999999
Q ss_pred EEEEec------CcceeEEEEEEeCCeEEEEEeccC----------------CCceeEEEeEeecCcceeeeCCCCCCCC
Q psy1488 491 VIRVTS------GMWTNTITLFLFDHQLVYCKRDIL----------------KRNTHVYKARLNIDTSQIINLPDGKDPH 548 (630)
Q Consensus 491 l~~~~~------~~~~~~~~~fLF~d~Ll~~k~~~~----------------~~~~~~~k~~i~L~~~~v~~~~d~~~~~ 548 (630)
++.+.. .++..++++|||+|+||+|++... .+..|.|+..|+|..+.|.+.++++..
T Consensus 244 ~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~- 322 (377)
T 1foe_A 244 VIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAE- 322 (377)
T ss_dssp EEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTT-
T ss_pred eeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEecCCCccc-
Confidence 875421 123468999999999988765321 124789999999999999988876431
Q ss_pred CCcccceeEEEEec------CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhc
Q psy1488 549 LGVTVRHAIKIHCS------DKDKWLLFCCRSLEDKARWLAAFQQERALVEQD 595 (630)
Q Consensus 549 ~g~~~~~~f~I~~~------~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~ 595 (630)
....|.|+.. .....|+|+|.|+++|+.|+++|.+++...++.
T Consensus 323 ----~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~ 371 (377)
T 1foe_A 323 ----ANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 371 (377)
T ss_dssp ----SCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----hhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence 1234777632 246789999999999999999999999776544
No 14
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=100.00 E-value=1.7e-47 Score=430.48 Aligned_cols=319 Identities=24% Similarity=0.378 Sum_probs=281.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCCc
Q psy1488 264 LSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPYK 343 (630)
Q Consensus 264 ~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~~ 343 (630)
...+.||+.+|+||++||+.||++|+.+.+.|+.+|.. +++.+++..||+||++|+.+|+.||.+|+.++..+. .
T Consensus 192 ~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~L~~---~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~~~~~~~--~ 266 (587)
T 3ky9_A 192 MTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQR---FLKPQDIEIIFINIEDLLRVHTHFLKEMKEALGTPG--A 266 (587)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHT---TSCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSST--T
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhccC--c
Confidence 45678999999999999999999999999999999974 788999999999999999999999999999986432 4
Q ss_pred CcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCC-chHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHHHH
Q psy1488 344 SCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHN-NYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLAEL 422 (630)
Q Consensus 344 ~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~-~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~L 422 (630)
..||++|+++.+.|++|..||.||+.|...++++.+.+ .|..|++.++..+.+.+++|.+||++|||||+||+|||++|
T Consensus 267 ~~ig~if~~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~L 346 (587)
T 3ky9_A 267 ANLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQEL 346 (587)
T ss_dssp CSHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHTCHHHHTTTTHHHHHHHSSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhcchHHHHHhChHHHHHHHHHHHhcCHHHHHHHHHHHhccccCCCCHHHHHhHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999987765 79999999998888889999999999999999999999999
Q ss_pred HhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec-Cccee
Q psy1488 423 LKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS-GMWTN 501 (630)
Q Consensus 423 lk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~-~~~~~ 501 (630)
+|+|+ +|+|+..|+.|++.|+.++..+|+.+++.|+..++.+++..|+++.+ +|...+| ++++|.+..... +...+
T Consensus 347 lk~T~-~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~~~-~l~~~gr-ll~~G~l~~~~~~~~~~~ 423 (587)
T 3ky9_A 347 VKHTQ-EAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQ-SLAHYGR-PKIDGELKITSVERRSKM 423 (587)
T ss_dssp HHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEETCCS-CGGGGCC-EEEEEEEEEECSSCCSCE
T ss_pred HhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-chhhcCc-eEEEeeEEEEeccCCCcc
Confidence 99998 69999999999999999999999999999999999999999999865 4666655 899999986643 34457
Q ss_pred EEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHH
Q psy1488 502 TITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARW 581 (630)
Q Consensus 502 ~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W 581 (630)
++++|||+|+||+|+++ +..|.|+..|+|..+.|.+.++++. .+...+++|.|........|+|.|.|.++|+.|
T Consensus 424 ~r~~fLF~d~Ll~~k~~---~~~y~~k~~i~L~~~~v~~~~~~~~--~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~W 498 (587)
T 3ky9_A 424 DRYAFLLDKALLICKRR---GDSYDLKDFVNLHSFQVRDDSSGDR--DNKKWSHMFLLIEDQGAQGYELFFKTRELKKKW 498 (587)
T ss_dssp EEEEEEETTEEEEEEEE---TTEEEEEEEEEGGGEEEEEC-------CCCTTCEEEEEEETTC---CEEEESSHHHHHHH
T ss_pred eEEEEEECCEEEEEEec---CCEEEeeeeechhhceeeecCCCCc--ccccccceeEEEEcCCCceEEEEeCCHHHHHHH
Confidence 99999999999999987 6789999999999999999877642 123467899999876567899999999999999
Q ss_pred HHHHHHHHHHHhhc
Q psy1488 582 LAAFQQERALVEQD 595 (630)
Q Consensus 582 ~~~L~~a~~~~~~~ 595 (630)
+++|.+++..+...
T Consensus 499 i~~I~~ai~~~~~~ 512 (587)
T 3ky9_A 499 MEQFEMAISNIYPE 512 (587)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHhhhhccc
Confidence 99999999887643
No 15
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=100.00 E-value=2.9e-46 Score=394.97 Aligned_cols=298 Identities=30% Similarity=0.499 Sum_probs=254.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcC--CCCCH---HHHHHHhcCHHHHHHHHH-HHHHHHHhhhcc
Q psy1488 265 SNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRN--DMFSP---EQIQTIFGNLEDILAFQS-SFLEDLETKLDW 338 (630)
Q Consensus 265 ~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~--~~l~~---~~~~~iF~ni~~I~~~h~-~ll~~L~~~~~~ 338 (630)
+.+.+|+.+|+||++||++||++|+.+.+.|+.||.... ..++. +++..||+|+++|+.+|. .||.+|+.+...
T Consensus 7 ~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~pl~~~~~~~~~p~~~~~~~~~iF~ni~~I~~~h~~~fl~~Le~~~~~ 86 (353)
T 1kz7_A 7 SLAILRRHVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHNRIFLRELESCIDC 86 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGCTTTTTTSCHHHHHTHHHHHTTHHHHHHHHHHTHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChhhhhhHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999997532 25664 578999999999999996 799999998752
Q ss_pred CCCCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHH
Q psy1488 339 DAPYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQ 418 (630)
Q Consensus 339 ~~~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LL 418 (630)
...||++|+++.+.|++|..||.||+.|..+++++..+ .|++.|.... +.+++|.+||++|||||+||+||
T Consensus 87 ----~~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~~~----~f~~~~~~~~-~~~l~L~~~Li~PvQRi~rY~LL 157 (353)
T 1kz7_A 87 ----PELVGRCFLERMEEFQIYEKYCQNKPRSESLWRQCSDC----PFFQECQKKL-DHKLSLDSYLLKPVQRITKYQLL 157 (353)
T ss_dssp ----GGGHHHHHHTTTTGGGHHHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHH-TCSSCHHHHHTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHhhHHHHHHHHHHhChHHHHHHHHHhhcc----hHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999876542 6777777543 56799999999999999999999
Q ss_pred HHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec--
Q psy1488 419 LAELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS-- 496 (630)
Q Consensus 419 L~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~-- 496 (630)
|++|+|+|+ +|+|+..|+.|++.|+.++..+|+.++. ..|.+|++ +|. ..|+||++|.+.....
T Consensus 158 L~~llk~t~-~~~d~~~L~~Al~~i~~v~~~iN~~~~~-----------~~i~~~~~-~L~-~~g~ll~~g~l~~~~~~~ 223 (353)
T 1kz7_A 158 LKEMLKYSK-HCEGAEDLQEALSSILGILKAVNDSMHL-----------IAITGYDG-NLG-DLGKLLMQGSFSVWTDHK 223 (353)
T ss_dssp HHHHHHTCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHH-----------TTEESCCS-CGG-GGCCEEEEEEEEEEECCC
T ss_pred HHHHHhccC-CCccHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHhCCCC-Chh-HhhhhheecceEEEecCc
Confidence 999999999 5799999999999999999999997652 36888876 454 4567999999976532
Q ss_pred -C---------cceeEEEEEEeCCeEEEEEeccC------CCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 497 -G---------MWTNTITLFLFDHQLVYCKRDIL------KRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 497 -~---------~~~~~~~~fLF~d~Ll~~k~~~~------~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
| .+..++++|||+|+||+|+++.. +...|.|+..|+|..+.|.+..+++ +++|.|+
T Consensus 224 ~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~--------~~~F~i~ 295 (353)
T 1kz7_A 224 KGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKGD--------TKKFEIW 295 (353)
T ss_dssp CC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTTB--------TTEEEEE
T ss_pred cccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCCCC--------CceEEEE
Confidence 2 12468999999999999998742 2368999999999999998765542 5789999
Q ss_pred ecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 561 CSDKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 561 ~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
..+....|+|+|.|+++|+.|+++|.+++....
T Consensus 296 ~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 328 (353)
T 1kz7_A 296 YNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQL 328 (353)
T ss_dssp ETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 877788999999999999999999999987754
No 16
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=100.00 E-value=6.7e-45 Score=384.71 Aligned_cols=298 Identities=22% Similarity=0.356 Sum_probs=247.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcC-CCCCHHHHHHHhcCHHHHHHHHHH-HHHHHHhhhccCCCCc
Q psy1488 266 NDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRN-DMFSPEQIQTIFGNLEDILAFQSS-FLEDLETKLDWDAPYK 343 (630)
Q Consensus 266 ~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~-~~l~~~~~~~iF~ni~~I~~~h~~-ll~~L~~~~~~~~~~~ 343 (630)
...+|+.+|+||++||++||++|+.+.+.|+.||.... +.....++..||+|+++|+.+|+. ||..|+.+... .
T Consensus 9 ~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~~~~p~~l~~~~~~iF~ni~~I~~~h~~~fl~~L~~~~~~----~ 84 (354)
T 2rgn_B 9 ALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGNIQQIYEWHRDYFLQELQRCLKD----P 84 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCCCSSSGGGHHHHHTTHHHHHHHHHHTHHHHHHHHHSC----G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhHHHHhhCHHHHHHHHHHHHHHHHHHHHcC----H
Confidence 35789999999999999999999999999999997632 111135679999999999999999 99999998852 2
Q ss_pred CcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHHHHH
Q psy1488 344 SCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLAELL 423 (630)
Q Consensus 344 ~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Ll 423 (630)
..||++|+++.+.|++|..||.||+.|...++++. ..|++.+.. ..+.+++|.+||++|||||+||+|||++|+
T Consensus 85 ~~ig~~fl~~~~~f~~Y~~Y~~n~~~a~~~l~~~~-----~~~f~~~~~-~~~~~l~L~s~Li~PvQRi~rY~LLL~~ll 158 (354)
T 2rgn_B 85 DWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEFG-----DSYFEELRQ-QLGHRLQLNDLLIKPVQRIMKYQLLLKDFL 158 (354)
T ss_dssp GGHHHHHHHTTTTTHHHHHHHHTSHHHHHHHTTTS-----HHHHHHHHH-HHCCSSCHHHHTTHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCcHHHHHHHHHHH-----HHHHHHHHH-hcCCCCCHHHHhhhHHHHHhHHHHHHHHHH
Confidence 56999999999999999999999999999987543 246666654 235679999999999999999999999999
Q ss_pred hcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec------C
Q psy1488 424 KYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS------G 497 (630)
Q Consensus 424 k~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~------~ 497 (630)
|+|+++|+|+..|+.|++.|+.++..+|+.++ ...|.+|++. | ...++|+++|.+..... .
T Consensus 159 k~t~~~~~d~~~l~~Al~~i~~v~~~in~~~~-----------~~~i~~~~~~-l-~~~~~Ll~~g~~~v~~~~~~~~~~ 225 (354)
T 2rgn_B 159 KYYNRAGMDTADLEQAVEVMCFVPKRCNDMMT-----------LGRLRGFEGK-L-TAQGKLLGQDTFWVTEPEAGGLLS 225 (354)
T ss_dssp HHTSSSCSCHHHHHHHHHHHHHHHHHHHHHHH-----------GGGCBSCCSC-S-TTSCCEEEEEEEEEECC-------
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHhCChhh-h-hhhccccccceEEEEcCCcCcccc
Confidence 99999999999999999999999999998754 2468888763 3 45678999999865321 1
Q ss_pred cceeEEEEEEeCCeEEEEEeccC-----CCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC---CCeEEE
Q psy1488 498 MWTNTITLFLFDHQLVYCKRDIL-----KRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD---KDKWLL 569 (630)
Q Consensus 498 ~~~~~~~~fLF~d~Ll~~k~~~~-----~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~---~~~~~~ 569 (630)
...+++++|||+|+||+|+++.. ....|.|+..|+|..+.|.+..+++ +++|.|++.+ ....|+
T Consensus 226 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~--------~~~F~i~~~~~~~~~~~~~ 297 (354)
T 2rgn_B 226 SRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGD--------PCRFALTSRGPEGGIQRYV 297 (354)
T ss_dssp CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGGGC--------TTEEEEEEECSSSCEEEEE
T ss_pred CCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccCCC--------CceEEEEecCCCCCceEEE
Confidence 23568999999999999998642 1247999999999999998765432 5789998754 247899
Q ss_pred EEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 570 FCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 570 l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
|+|.|+++|+.|+++|.+++.....
T Consensus 298 l~a~s~~ek~~W~~~i~~ai~~~~~ 322 (354)
T 2rgn_B 298 LQAADPAISQAWIKHVAQILESQRD 322 (354)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999977543
No 17
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=100.00 E-value=1.2e-44 Score=376.45 Aligned_cols=293 Identities=26% Similarity=0.447 Sum_probs=243.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCH---HHHHHHhcCHHHHHHHHHH-HHHHHHhhhccCC
Q psy1488 265 SNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSP---EQIQTIFGNLEDILAFQSS-FLEDLETKLDWDA 340 (630)
Q Consensus 265 ~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~---~~~~~iF~ni~~I~~~h~~-ll~~L~~~~~~~~ 340 (630)
+...+|+.||+||++||++||++|+.+.+.|+.|+....+.++. +++..||+|+++|+.+|+. ||.+|+.+...
T Consensus 5 k~~~kR~~vi~El~~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~~~~iF~ni~~i~~~h~~~fl~~L~~~~~~-- 82 (311)
T 1nty_A 5 KSARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQL-- 82 (311)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTTTCHHHHHTTHHHHHHHHHHTHHHHHHHTTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChhhhhhHHHhhcCHHHHHHHHHHHHHHHHHHHHCC--
Confidence 34678999999999999999999999999999999764334443 4689999999999999996 99999998642
Q ss_pred CCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHH
Q psy1488 341 PYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLA 420 (630)
Q Consensus 341 ~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~ 420 (630)
...||++|+++.+.|++|..||.||+.|...+.+.. ..|++.++.... .+++|.+||++|||||+||+|||+
T Consensus 83 --~~~ig~~f~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~-----~~f~~~~~~~~~-~~l~L~~~Li~PvQRi~rY~LLL~ 154 (311)
T 1nty_A 83 --PEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHA-----GSYFDEIQQRHG-LANSISSYLIKPVQRITKYQLLLK 154 (311)
T ss_dssp --GGGTHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHT-----TTHHHHHHHHHT-CSSCHHHHHTHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH-----HHHHHHHHHhcc-CCCCHHHHhhhhHHHHHHHHHHHH
Confidence 357999999999999999999999999999996532 367777766544 469999999999999999999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccCCccEEEeeeEEEEec---C
Q psy1488 421 ELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGEDLIETSSQLIHQGEVIRVTS---G 497 (630)
Q Consensus 421 ~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~---~ 497 (630)
+|+|+|+++|+| |+.|++.|++++..+|+.++. ..+++++. .+ ...|+|+++|.+..... .
T Consensus 155 ~llk~t~~~h~~---l~~Al~~~~~v~~~~N~~~~~-----------~~l~~~~~-~l-~~~g~li~~~~~~~~~~~~~~ 218 (311)
T 1nty_A 155 ELLTCCEEGKGE---IKDGLEVMLSVPKRANDAMHL-----------SMLEGFDE-NI-ESQGELILQESFQVWDPKTLI 218 (311)
T ss_dssp HHHHTSCTTCTT---HHHHHHHHHHHHHHHHHHHHH-----------TTEESCCS-CS-GGGCCEEEEEEEEEECSSSSS
T ss_pred HHHHhCCCCcHH---HHHHHHHHHHHHHHHHHHHHH-----------HHHhCCCC-Ch-HhcCCceeeeeEEEEcCcccc
Confidence 999999998876 889999999999999987652 34677753 23 45578999999876532 1
Q ss_pred cceeEEEEEEeCCeEEEEEeccC--CCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec---CCCeEEEEEe
Q psy1488 498 MWTNTITLFLFDHQLVYCKRDIL--KRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS---DKDKWLLFCC 572 (630)
Q Consensus 498 ~~~~~~~~fLF~d~Ll~~k~~~~--~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~---~~~~~~~l~a 572 (630)
+..+++++|||+|+||+|+++.. +...|.|++.|+|..+.|.+..+++ +++|.|+.. +....|+|+|
T Consensus 219 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~--------~~~F~i~~~~~~~~~~~~~l~a 290 (311)
T 1nty_A 219 RKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGD--------PCKFALWVGRTPTSDNKIVLKA 290 (311)
T ss_dssp CCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTTC--------TTEEEEEESSSCCTTTCEEEEC
T ss_pred cccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccCCC--------CceEEEEeCCCCCCCceEEEEC
Confidence 34579999999999999998632 3467999999999999998776653 468999873 2356799999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy1488 573 RSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 573 ~s~~ek~~W~~~L~~a~~~ 591 (630)
.|+++|+.|+++|.+++..
T Consensus 291 ~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 291 SSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999875
No 18
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=100.00 E-value=8.4e-46 Score=439.13 Aligned_cols=323 Identities=20% Similarity=0.362 Sum_probs=276.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCC--C
Q psy1488 264 LSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDA--P 341 (630)
Q Consensus 264 ~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~--~ 341 (630)
...+.+|+++|+||++||+.||++|+.+.+.|+.+|.....+++..++..||+||++|+.+|+.||.+|+.++..+. .
T Consensus 195 ~~~~~~~revI~ELi~TE~~YV~~L~~l~~~y~~pL~~~~~~l~~~~~~~IF~Ni~~I~~~h~~fL~~Le~~~~~~~~~~ 274 (1049)
T 3ksy_A 195 TSGEQTYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGS 274 (1049)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCTTTSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHCCSSS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 34456788999999999999999999999999999987667899999999999999999999999999999986322 2
Q ss_pred CcCcHHHHHHHhcC--CcccHHHHhhCh--HHHHHHHHHHHhCCchHHHHHH-HHhhccCCCCCccccchhhhhhhhccH
Q psy1488 342 YKSCIGETFLKHKS--GFRMYSEYCNSH--PMAIATLQELYQHNNYSKFFEA-CRLMRGLIEIPLDGYLLTPVQRICKYP 416 (630)
Q Consensus 342 ~~~~ig~vf~~~~~--~~~~Y~~Y~~~~--~~a~~~l~~~~~~~~f~~fl~~-~~~~~~~~~l~L~s~Li~PvQRi~rY~ 416 (630)
....||++|+++++ .|++|..||.|| +.|...++++.+++.|..|++. ++..+.+.+++|.+||++|||||+||+
T Consensus 275 ~~~~IgdiFl~~~~~~~F~~Y~~Yc~ny~~~~a~~~l~~l~~~~~f~~fl~~~~~~~~~~~~l~L~s~LikPvQRI~rY~ 354 (1049)
T 3ksy_A 275 PHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYF 354 (1049)
T ss_dssp SSCCCHHHHHHHHHTTTTSHHHHHHHHHHCTTHHHHHHTTSSSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHhhhhHHHHHHHhhccHHHHHHHHHHhcChHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHhHHH
Confidence 23689999999976 778999999995 8999999998877899999998 444455667899999999999999999
Q ss_pred HHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHhhcCCC
Q psy1488 417 LQLAELLKYTKTDHPDYVKITEALEAMRDVAMLINE----------------------RKRRMESLEKLAAWQQRVEGWE 474 (630)
Q Consensus 417 LLL~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne----------------------~~~~~e~~~~l~~l~~~i~~~~ 474 (630)
|||++|+|+|+ +|+||..|++|++.|+.++..||+ .+++.++.+++.+++..|++|+
T Consensus 355 LLL~~LlK~Tp-~~~D~~~L~~Al~~i~~v~~~VNe~~~~~~~k~r~~e~~~~~~~n~~kr~~e~~~~l~~lq~~i~~~~ 433 (1049)
T 3ksy_A 355 ELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWE 433 (1049)
T ss_dssp HHHHHHHHSCC-CHHHHHHHHHHHHHTHHHHHHHHHHTTSTTHHHHHHHHC-------------CCSHHHHHHHTSSSCC
T ss_pred HHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999998 569999999999999999999997 4457778889999999999999
Q ss_pred CCCcccCCccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCC-------CceeEEEeEeecCcceeeeCCCCCCC
Q psy1488 475 GEDLIETSSQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILK-------RNTHVYKARLNIDTSQIINLPDGKDP 547 (630)
Q Consensus 475 ~~~L~~~~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~-------~~~~~~k~~i~L~~~~v~~~~d~~~~ 547 (630)
+.+|..++|+||++|.+.+...+ +++|+|||+|+||+||++..+ ...|.|+..|+|..+.|.+.++++
T Consensus 434 ~~~l~~~~r~Li~eG~l~~~~~k---~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~-- 508 (1049)
T 3ksy_A 434 GKDIGQCCNEFIMEGTLTRVGAK---HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN-- 508 (1049)
T ss_dssp SSCGGGTCSCCCCEEEEEETTCS---SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSS--
T ss_pred ccccccccceEEEeceEEEEccC---ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCc--
Confidence 99999999999999999764432 689999999999999987432 245999999999999998887754
Q ss_pred CCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhccc
Q psy1488 548 HLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDRE 597 (630)
Q Consensus 548 ~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~ 597 (630)
..+++|.|.+... ..|+|+|.|+++|+.|+++|..++.+...++.
T Consensus 509 ----~~~~~F~I~~~~~-~~~~L~A~S~eeK~~Wi~~I~~~q~k~~~~r~ 553 (1049)
T 3ksy_A 509 ----EYKHAFEIILKDE-NSVIFSAKSAEEKNNWMAALISLQYRSTLERM 553 (1049)
T ss_dssp ----SCCSEEEECCTTS-CCEEEECSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cccceEEEEcCCC-CEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999977543 68999999999999999999999877654443
No 19
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=100.00 E-value=5.5e-47 Score=421.04 Aligned_cols=320 Identities=21% Similarity=0.339 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCC--
Q psy1488 263 LLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDA-- 340 (630)
Q Consensus 263 l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~-- 340 (630)
+.+.+.+|+.+|+||++||+.||++|+.+.+.|+.++.. .++++..++..||+|+++|+.+|+.||.+|+.+.....
T Consensus 21 l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~~l~~-~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~ 99 (510)
T 3jzy_A 21 MQPIERKRQGYIHELIQTEERYMADLQLVVEVFQKRMAE-SGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEK 99 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHccCHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 456678999999999999999999999999999999975 67888999999999999999999999999998874221
Q ss_pred CCcCcHHHHHHHhcCCcccHHHHhhChHHHHHHHHHHHhC-CchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHH
Q psy1488 341 PYKSCIGETFLKHKSGFRMYSEYCNSHPMAIATLQELYQH-NNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQL 419 (630)
Q Consensus 341 ~~~~~ig~vf~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~-~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL 419 (630)
.....||++|+++.+.|++|..||.||+.|...+.++.++ +.|..|++.++..+.+.+++|.+||++|||||+||+|||
T Consensus 100 ~~~~~ig~~f~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LLL 179 (510)
T 3jzy_A 100 MPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLI 179 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CchhhHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhChhhhhhcCcHHHH
Confidence 1246799999999999999999999999999999887765 489999999998888888999999999999999999999
Q ss_pred HHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--Ccc-------cCCccEEEeee
Q psy1488 420 AELLKYTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEGE--DLI-------ETSSQLIHQGE 490 (630)
Q Consensus 420 ~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~~--~L~-------~~~r~ll~~G~ 490 (630)
++|+|+|+++|+||..|++|++.|+.++..+|+.+++.|+.+++.+++..+. +.|. .++ .+.|+||++|.
T Consensus 180 ~~llk~t~~~~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~l~~~l~-~~g~~~~l~~~~~~~~~~~r~li~eG~ 258 (510)
T 3jzy_A 180 RSILENTPESHADHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQAHVQ-CEGLAEQLIFNSLTNCLGPRKLLHSGK 258 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccCccccccccccccccccceeEEece
Confidence 9999999999999999999999999999999999999999999999999886 2221 222 36799999999
Q ss_pred EEEEecCcceeEEEEEEeCCeEEEEEeccCC--------------Ccee-EEEeEeecCcceeeeCCCCCCCCCCcccce
Q psy1488 491 VIRVTSGMWTNTITLFLFDHQLVYCKRDILK--------------RNTH-VYKARLNIDTSQIINLPDGKDPHLGVTVRH 555 (630)
Q Consensus 491 l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~--------------~~~~-~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~ 555 (630)
+.+... .+++++|||+|+||+|+.+... ...| +|+..|+|..+.|.+..|.. ..++
T Consensus 259 l~~~~~---~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~------~~~~ 329 (510)
T 3jzy_A 259 LYKTKS---NKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPS------SDEP 329 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCC---CcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCC------cccc
Confidence 986532 3589999999999999965322 1123 56899999999998776543 3478
Q ss_pred eEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhc
Q psy1488 556 AIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQD 595 (630)
Q Consensus 556 ~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~ 595 (630)
+|.|+.. ++.|+|+|.|+++|+.|+++|.+++..+...
T Consensus 330 ~F~i~~~--~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 367 (510)
T 3jzy_A 330 VFHISHI--DRVYTLRTDNINERTAWVQKIKAASEQYIDT 367 (510)
T ss_dssp ----------------------------------------
T ss_pred ceeeecc--ceeEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999764 4579999999999999999999999877433
No 20
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=100.00 E-value=1.5e-35 Score=289.86 Aligned_cols=188 Identities=26% Similarity=0.429 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCCcCcH
Q psy1488 267 DQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPYKSCI 346 (630)
Q Consensus 267 ~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~~~~i 346 (630)
..+|+.+|+||++||++||++|+.+.+.|+.|+.. .++++..++..||+|+++|+.+|+.||.+|+.+...+. ....|
T Consensus 11 ~~~R~~vi~ELi~TE~~Yv~~L~~l~~~y~~pl~~-~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~-~~~~i 88 (209)
T 1by1_A 11 KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQT-SEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPE-AQQRV 88 (209)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSSSSSGGGTTHHHHHHHHHHHHHHHHHHHHHHHTTC-SSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHcCCc-chhhH
Confidence 45799999999999999999999999999999975 56889999999999999999999999999999986432 35689
Q ss_pred HHHHHHhcCCcc-cHHHHhhChHHHHHHHHHHHhCCchHHHHHHHHhhccCCCCCccccchhhhhhhhccHHHHHHHHhc
Q psy1488 347 GETFLKHKSGFR-MYSEYCNSHPMAIATLQELYQHNNYSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQLAELLKY 425 (630)
Q Consensus 347 g~vf~~~~~~~~-~Y~~Y~~~~~~a~~~l~~~~~~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~ 425 (630)
|++|+++.+.|+ +|..||.||+.|...+.++ ++.|..|++.|.. ..+..++|.+||++|||||+||+|||++|+|+
T Consensus 89 g~~f~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~--~~~f~~fl~~~~~-~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~ 165 (209)
T 1by1_A 89 GGCFLNLMPQMKTLYLTYCANHPSAVNVLTEH--SEELGEFMETKGA-SSPGILVLTTGLSKPFMRLDKYPTLLKELERH 165 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTHHHHTTTTCC-CSSTTTHHHHHTTSTTTGGGTHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHhcC-CCCCcCCHHHHhhHHHHHHhHHHHHHHHHHhh
Confidence 999999999996 9999999999999999887 5689999998854 34556999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1488 426 TKTDHPDYVKITEALEAMRDVAMLINERKRRMES 459 (630)
Q Consensus 426 t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~ 459 (630)
|+++|+||..|+.|++.|+.++..||+.+++.|+
T Consensus 166 t~~~h~d~~~l~~Al~~i~~v~~~iNe~~r~~e~ 199 (209)
T 1by1_A 166 MEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKEL 199 (209)
T ss_dssp SCCCSSSTHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876653
No 21
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=99.78 E-value=1.9e-19 Score=170.70 Aligned_cols=163 Identities=12% Similarity=0.225 Sum_probs=131.1
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----C----CcccCCccEEEeeeEEEEe
Q psy1488 425 YTKTDHPDYVKITEALEAMRDVAMLINERKRRMESLEKLAAWQQRVEGWEG-----E----DLIETSSQLIHQGEVIRVT 495 (630)
Q Consensus 425 ~t~~~~~d~~~L~~A~~~i~~l~~~vne~~~~~e~~~~l~~l~~~i~~~~~-----~----~L~~~~r~ll~~G~l~~~~ 495 (630)
||+++++|+..|++|++.+++++.+||+.++++|+.++|.+++.+|++... . .+.-..|+||++|.|....
T Consensus 2 ~T~~~~~e~~~L~~Al~~ik~i~~~VNe~vre~E~~~rL~eiq~~l~~~~~~~~~~~~~f~~~dL~~R~Ll~eG~L~~k~ 81 (185)
T 2lg1_A 2 MTKDNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKEDLKRKKLVRDGSVFLKN 81 (185)
T ss_dssp CSSTTTSCCTTSCCSSSSSTTTSGGGGGGHHHHHHHHHHHHHHHSSCSSCCEECTTSCEECHHHHTTSCEEEEEEEEEEC
T ss_pred CCCCCcHhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcccccccccccccccccccCCCceeeeceEEEec
Confidence 789999999999999999999999999999999999999999999986321 0 0112359999999998554
Q ss_pred cCcceeEEEEEEeCCeEEEEEeccCCCceeEEE------eEeecCcceeeeCCCCCCCCCCcccceeEEEEecC--CCeE
Q psy1488 496 SGMWTNTITLFLFDHQLVYCKRDILKRNTHVYK------ARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD--KDKW 567 (630)
Q Consensus 496 ~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k------~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~--~~~~ 567 (630)
......++|+|||+|+||+|+++ ..+|.|+ ..|+|..+.|.+...+. .+|.+.... ....
T Consensus 82 ~~~~~~d~~~fLf~D~Ll~~~~~---~~ky~~~~~~~~~pvi~L~~~~vre~a~d~---------~~~fli~~~~~g~~~ 149 (185)
T 2lg1_A 82 AAGRLKEVQAVLLTDILVFLQEK---DQKYIFASLDQKSTVISLKKLIVREVAHEE---------KGLFLISMGMTDPEM 149 (185)
T ss_dssp TTCCEEEEEEEEESSEEECCEEE---TTEEECCCCSSSCSEEESSSCEEECCSSCS---------SEEEEECCSSSCCCC
T ss_pred cCCCeeeEEEEeecCEEEEEEec---CCEEEEEcccCCCCeEeecceEEeccCCCC---------CeEEEEEecCCCCeE
Confidence 43456799999999999999985 6778876 45889999988765522 345444422 2468
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHhhcccCC
Q psy1488 568 LLFCCRSLEDKARWLAAFQQERALVEQDREDG 599 (630)
Q Consensus 568 ~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~~~ 599 (630)
|+|.|.|+++|+.|+++|.+|+..+..+...|
T Consensus 150 yel~a~s~~er~~W~~~I~~Ai~~~~~~~~~~ 181 (185)
T 2lg1_A 150 VEVHASSKEERNSWIQIIQDTINTLNRDEDEG 181 (185)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHHHHSCSC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHhCChhhhcC
Confidence 99999999999999999999999987555544
No 22
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=99.64 E-value=6.3e-15 Score=127.85 Aligned_cols=105 Identities=15% Similarity=0.284 Sum_probs=88.2
Q ss_pred cCCccEEEeeeEEEEecCcc--eeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeE
Q psy1488 480 ETSSQLIHQGEVIRVTSGMW--TNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAI 557 (630)
Q Consensus 480 ~~~r~ll~~G~l~~~~~~~~--~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f 557 (630)
.++|.||++|.+++++.... .+.+|+|||||+||+|+++..+...|.|...++|..+.|.+++|.. ..+++|
T Consensus 3 ~pgR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~------~~~n~f 76 (113)
T 1zc3_B 3 TPGQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNP------PMKDMF 76 (113)
T ss_dssp --CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBT------TBSSEE
T ss_pred CCCeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCc------ccceEE
Confidence 57899999999999885432 4568999999999999997665566999999999999999988743 468999
Q ss_pred EEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 558 KIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 558 ~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.|.. ..+.++|+|++++||.+|+.+|++|++..
T Consensus 77 ~i~~--~~~s~~~~aes~~eK~~Wl~~~~~a~~~~ 109 (113)
T 1zc3_B 77 KLLM--FPESRIFQAENAKIKREWLEVLEETKRAL 109 (113)
T ss_dssp EEEE--TTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEe--CCceEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 9976 34578999999999999999999998654
No 23
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=99.59 E-value=3.2e-16 Score=141.86 Aligned_cols=117 Identities=19% Similarity=0.314 Sum_probs=54.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhccccccchhhhh-------hhhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLRVSQEDTVEDCL-------AALAS 249 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~~s~e~~~e~~l-------~~~~~ 249 (630)
...|+|+|||.++.++||+|++||+|.|+.+. ++|||.|+++|+.||||++||+.+.+......... .....
T Consensus 5 ~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (142)
T 2kbt_A 5 FGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDYSEYLPETGGGSGSSMTYKLILN 84 (142)
T ss_dssp CCEEEESSCCCCSSSSBCCCCTTCEEEEEECCCSSSEEEEEETTEEEEEETTSEEESSCCCCCCC---------------
T ss_pred CeEEEECCccCCCCCCcCCCCCCCEEEEEEecCCCCeEEEEECCeeEEechHHEEEcccccCccccCCCccccccccccc
Confidence 35799999999999999999999999999985 78999999999999999999987754321111000 00000
Q ss_pred CC--CcccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1488 250 GG--SKTLRRRTSISLLSNDQVRSRVVRELINTERDFVKVLHDVSEG 294 (630)
Q Consensus 250 ~~--~~~l~~~~~~~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~ 294 (630)
+. ......+.......++..|+.++.+++++|+.|++.|+.++..
T Consensus 85 ~~~~~~~~~te~~~~~~~~~~~r~~v~~~~~~~E~~y~~~~~~~~~~ 131 (142)
T 2kbt_A 85 GKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVT 131 (142)
T ss_dssp -----------------------------------------------
T ss_pred ccccCccccccccchhhHHHHHHHHhhhcCccchhhHHHHHhhcccc
Confidence 00 0001111111234556789999999999999999999998864
No 24
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=99.59 E-value=3.6e-16 Score=118.98 Aligned_cols=55 Identities=29% Similarity=0.716 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCC-CCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEE-LGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~e-L~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
.+|+|+|||.++.++| |+|++||+|.|+++.+++||.|++ +|+.||||+|||+++
T Consensus 4 ~~~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i 60 (60)
T 2lx7_A 4 ARCRTLYPFSGERHGQGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL 60 (60)
T ss_dssp CEEEESCCCCSCCCSSCCCCCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred CEEEECcccCCCCCCCCccCCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence 4689999999999887 999999999999999999999996 799999999999864
No 25
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=99.54 E-value=7.9e-14 Score=123.13 Aligned_cols=111 Identities=15% Similarity=0.195 Sum_probs=87.3
Q ss_pred CcccCCccEEEeeeEEEEec-----CcceeEEEEEEeCCeEEEEEecc--CCCceeEEEeEeecCcceeeeCCCCCCCCC
Q psy1488 477 DLIETSSQLIHQGEVIRVTS-----GMWTNTITLFLFDHQLVYCKRDI--LKRNTHVYKARLNIDTSQIINLPDGKDPHL 549 (630)
Q Consensus 477 ~L~~~~r~ll~~G~l~~~~~-----~~~~~~~~~fLF~d~Ll~~k~~~--~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~ 549 (630)
.|..|.|+|++.+.++.+.. ++..++|++|||||+|||||.-. .....|.++..++|..+.|....+.
T Consensus 5 ~L~~phRrlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e----- 79 (140)
T 3qwm_A 5 VLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ----- 79 (140)
T ss_dssp -----CCCEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS-----
T ss_pred eeccCCceEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC-----
Confidence 46789999999999987642 22357999999999999998321 1356799999999999999877654
Q ss_pred CcccceeEEEEecC----CCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 550 GVTVRHAIKIHCSD----KDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 550 g~~~~~~f~I~~~~----~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
.++|+|.|.+.. ....++|.|+|++||.+|+.+|+.+|+.+.+
T Consensus 80 --~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~e 126 (140)
T 3qwm_A 80 --YYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQE 126 (140)
T ss_dssp --SCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 268999998754 2367999999999999999999999998874
No 26
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.53 E-value=1.9e-14 Score=127.23 Aligned_cols=119 Identities=14% Similarity=0.280 Sum_probs=95.8
Q ss_pred HHHhhcCCCCCCcccCCccEEEeeeEEEEec-CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCC
Q psy1488 466 WQQRVEGWEGEDLIETSSQLIHQGEVIRVTS-GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDG 544 (630)
Q Consensus 466 l~~~i~~~~~~~L~~~~r~ll~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~ 544 (630)
++..|++|+|.++..- +..++.+.+..... ....++|++|||+++||+|++. .+...|.|++.+||..+.|.+.+|.
T Consensus 10 l~~~I~gWeG~~i~~l-G~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~-~~~~~f~~kgklPL~g~~V~~~ed~ 87 (132)
T 1v61_A 10 LSEPIQAWEGDDIKTL-GNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSAS-PRMSGFMYQGKIPIAGMVVNRLDEI 87 (132)
T ss_dssp TTSCCBTCCSSCSTTT-CCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECS-SSSSCCEEEEEECTTTCBCSTTCSS
T ss_pred HhhhhcccccCChhhc-CCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEec-CCCceEEEEEEEecceeEEEecccc
Confidence 4678999999988555 47777777654321 1335799999999999999986 4456899999999999999887664
Q ss_pred CCCCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 545 KDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 545 ~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
+ ..+|+|+|.+.. .+.++|.|.|++|+++|+.+|..+++.+.
T Consensus 88 ~------~~~~aFeI~g~~-~~~i~v~~~s~eE~~~Wl~~L~~~i~~~~ 129 (132)
T 1v61_A 88 E------GSDCMFEITGST-VERIVVHCNNNQDFQEWMEQLNRLTKSGP 129 (132)
T ss_dssp S------SSCCCEEEECSS-SCEEEECCCCSHHHHHHHHHHHHHHTTSC
T ss_pred c------cCccEEEEecCC-CceEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 3 468999998754 35788999999999999999999987653
No 27
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=99.52 E-value=4.4e-15 Score=115.15 Aligned_cols=56 Identities=27% Similarity=0.612 Sum_probs=51.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
...++|+|||.++.++||+|++||+|.|++..++|||.|++ +|+.||||+|||+.+
T Consensus 6 ~~~~~Alydy~a~~~~ELs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l 63 (65)
T 2lj0_A 6 LFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPL 63 (65)
T ss_dssp SCEEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEEC
T ss_pred CEEEEEceeECCCCcCCcCCCCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEE
Confidence 35789999999999999999999999999999999999985 699999999999864
No 28
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=99.48 E-value=3.2e-14 Score=113.57 Aligned_cols=58 Identities=21% Similarity=0.343 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCC--CCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAM--EAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~--~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
..+|+|+|+|.+. .++||+|++||+|.|+++.+++||.|+++|+.||||+|||+.+..
T Consensus 9 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 68 (73)
T 2ebp_A 9 CGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSS 68 (73)
T ss_dssp SEEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCSSSCEEEECSSCEEEECSTTEEECCC
T ss_pred ceEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCCCCeEEEEECCCEEEEeHHHEEECCC
Confidence 4689999999975 999999999999999999999999999999999999999987643
No 29
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-14 Score=112.90 Aligned_cols=56 Identities=23% Similarity=0.389 Sum_probs=52.6
Q ss_pred EEEEEeeccCCC--CCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAM--EAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~--~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
.+|+|+|+|.++ .++||+|++||+|.|+.+.+++||.|+++|+.||||++||+.+.
T Consensus 7 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~ 64 (67)
T 2eyx_A 7 IYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLD 64 (67)
T ss_dssp CBEEECCCBCCCTTCSSBCCBCSSEEEEEEEECTTSEEEEEETTEEEEEEGGGBCCBC
T ss_pred EEEEEeEEECCCCCCCCccccCCCCEEEEEEecCCCEEEEEECCCEEEEehHhEEEcC
Confidence 578999999999 89999999999999999999999999999999999999998764
No 30
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=99.47 E-value=2.3e-14 Score=111.61 Aligned_cols=56 Identities=25% Similarity=0.490 Sum_probs=52.6
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
.|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||+|||+.+..
T Consensus 3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~ 58 (65)
T 2nwm_A 3 AARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPL 58 (65)
T ss_dssp EEEECSCBCCCSTTBCCBCTTCEEEEEECCTTTCEEEEETTEEEEECGGGEEECCC
T ss_pred EEEEeeeECCCCcCccCCcCCCEEEEEEecCCCEEEEEECCcEEEEehhhEEEcCC
Confidence 68999999999999999999999999999899999999999999999999987643
No 31
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.5e-14 Score=115.98 Aligned_cols=64 Identities=63% Similarity=1.232 Sum_probs=58.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccccccchh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQEDTVE 241 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~e~~~e 241 (630)
..+|+|+|+|.++.++||+|++||+|.|+.+.+++||.|+++|+.||||.+||+.+...+...+
T Consensus 10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~ 73 (81)
T 2ysq_A 10 IVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDEVE 73 (81)
T ss_dssp CEEEEESSCCCCSSSSSCCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEESSCCCCCCC
T ss_pred ceEEEEeeeECCCCCCcCCCCCCCEEEEEEEcCcCEEEEEECCCEEEechHHEEEcCCcccccc
Confidence 5789999999999999999999999999999899999999999999999999998866555443
No 32
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=99.47 E-value=2.1e-14 Score=112.78 Aligned_cols=58 Identities=26% Similarity=0.422 Sum_probs=53.8
Q ss_pred EEEEEeeccCCC--CCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAM--EAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~--~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
.+|+|+|+|.++ .++||+|++||+|.|+...+++||.|+.+|+.||||++||+.+...
T Consensus 2 ~~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~ 61 (67)
T 2bzy_A 2 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ 61 (67)
T ss_dssp EEEEECSCBCSEEECTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEECCSC
T ss_pred cEEEEeeeECCCCCCCCccccCCCCEEEEEEecCCCeEEEEeCCcEEEEehHHeEECCCc
Confidence 578999999999 9999999999999999999999999999999999999999876443
No 33
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=99.46 E-value=1.3e-14 Score=112.99 Aligned_cols=58 Identities=26% Similarity=0.630 Sum_probs=53.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
.+|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||+|||+.+...
T Consensus 2 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~ 59 (65)
T 2fei_A 2 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELELE 59 (65)
T ss_dssp CEEECSSCCCCCSTTBCCCCTTCEEECCCCSSSSEEEEESSSCEEEEETTTSCBCCCC
T ss_pred eEEEECccCCcCCcCccCCCCCCEEEEEEecCCCEEEEEECCcEEEecHHHEEEcCCC
Confidence 3689999999999999999999999999998999999999999999999999876433
No 34
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=99.46 E-value=1.9e-14 Score=109.49 Aligned_cols=55 Identities=33% Similarity=0.547 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
+.|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 56 (58)
T 2bz8_A 2 VEAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREI 56 (58)
T ss_dssp CCEEESSCBCCCSTTBCCBCTTCEEEEEECCTTTEEEEEETTEEEEEEGGGEEEC
T ss_pred EEEEECcccCCCCcCEeeECCCCEEEEEEeCCCCEEEEEECCeEEEEehHHeEEc
Confidence 4588999999999999999999999999998999999999999999999999765
No 35
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=99.46 E-value=2.6e-14 Score=109.55 Aligned_cols=55 Identities=42% Similarity=0.709 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l 59 (60)
T 1w70_A 5 MRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 59 (60)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred cEEEECccCCcCCCCCccCCCCCEEEEEEeCCCCeEEEEECCCEEEechHHEEEC
Confidence 5799999999999999999999999999999999999999999999999999754
No 36
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=9e-14 Score=115.36 Aligned_cols=59 Identities=25% Similarity=0.409 Sum_probs=53.6
Q ss_pred eEEEEEeeccCC--CCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVA--MEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~--~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..+|+|+|+|.+ +.++||+|++||+|.|+.+.+++||.|+++|+.||||++||+.+...
T Consensus 16 ~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~ 76 (88)
T 2dbk_A 16 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ 76 (88)
T ss_dssp CEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECTTSCEEEECSSCEEEECTTTEEECCSS
T ss_pred CEEEEEcccccCCCCCCCcccCCCCCEEEEEEecCCCEEEEEeCCCEEEEehHHeEECCCC
Confidence 468999999995 49999999999999999999999999999999999999999877443
No 37
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.45 E-value=3.9e-14 Score=109.38 Aligned_cols=55 Identities=33% Similarity=0.584 Sum_probs=52.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.+..++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 60 (62)
T 1k4u_S 6 SQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDS 60 (62)
T ss_dssp EEEECCSCBCCCSSSBCCBCSSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCS
T ss_pred eEEEECCCCCcCCCCCccCCCCCEEEEEEeCCCCEEEEEECCcEEEEeHHHEEEC
Confidence 5799999999999999999999999999998999999999999999999999865
No 38
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=99.45 E-value=2.6e-14 Score=110.37 Aligned_cols=56 Identities=27% Similarity=0.436 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEe-cCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDT-LDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
+.|+|+|+|.++.++||+|++||+|.|+.. .+++||.|+.+|+.||||++||+.+.
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 58 (62)
T 2j6f_A 2 VDYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIK 58 (62)
T ss_dssp CCEEECSCBCCSSTTBCCBCTTCEEEEEEECSSTTEEEEEETTEEEEEEGGGEEECC
T ss_pred EEEEECccCCcCCcCCcCCcCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECC
Confidence 458899999999999999999999999999 78999999999999999999998663
No 39
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=99.45 E-value=3.2e-14 Score=111.83 Aligned_cols=56 Identities=30% Similarity=0.666 Sum_probs=52.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+.
T Consensus 4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 59 (68)
T 2ew3_A 4 PCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIV 59 (68)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEESSSSEEEEEETTEEEEEEGGGEEESC
T ss_pred CEEEEeeeECCCCCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEcC
Confidence 57899999999999999999999999999999999999999999999999998653
No 40
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=99.45 E-value=3.1e-14 Score=108.38 Aligned_cols=55 Identities=42% Similarity=0.810 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
.+++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 56 (58)
T 1uti_A 2 RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56 (58)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred eEEEECccCCCCCcCCCCCCCCCEEEEEEECCCCEEEEEECCeEEEeeHHHeEEc
Confidence 4689999999999999999999999999998999999999999999999999754
No 41
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=3.7e-14 Score=114.26 Aligned_cols=60 Identities=33% Similarity=0.643 Sum_probs=55.3
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQE 237 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~e 237 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|+++|+.||||.+||+.+...+
T Consensus 10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~ 69 (76)
T 2epd_A 10 VVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTE 69 (76)
T ss_dssp CEEEEESSCEECSSTTBCEECTTCEEEEEEEEETTEEEEEETTEEEEEESSSEECCSSCS
T ss_pred CEEEEECcCCCCCCCCccCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCCC
Confidence 478999999999999999999999999999988999999999999999999998775443
No 42
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=99.44 E-value=4.8e-14 Score=111.12 Aligned_cols=56 Identities=27% Similarity=0.583 Sum_probs=52.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|+... +++||.|+.+|+.||||++||+.+.
T Consensus 3 ~~~~Alydy~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~yV~~~~ 60 (69)
T 2ydl_A 3 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 60 (69)
T ss_dssp EEEEESSCBCCCSTTBCCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGGGEEECC
T ss_pred cEEEEcccCCCCCCCccccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHHHEEECC
Confidence 5789999999999999999999999999986 7899999999999999999998764
No 43
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=99.44 E-value=3e-14 Score=108.42 Aligned_cols=54 Identities=39% Similarity=0.650 Sum_probs=50.6
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhhc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRLR 233 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~~ 233 (630)
.|+|+|+|.++.++||+|++||+|.|++..+++||.|+.. |+.||||++||+.+
T Consensus 2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~ 57 (58)
T 1jo8_A 2 WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG 57 (58)
T ss_dssp CEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred EEEECceECCCCCCCcccCCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEEC
Confidence 4789999999999999999999999999989999999976 99999999999754
No 44
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6.9e-14 Score=110.10 Aligned_cols=58 Identities=33% Similarity=0.649 Sum_probs=53.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+..
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 2dl4_A 7 GNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSG 64 (68)
T ss_dssp CCEEEESSCCCCSSTTBCCCCTTCEEEEEECCCSSEEEEECSSCEEEEETTTEEECCC
T ss_pred CCEEEEeeeECCCCcCCcCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHeEECCC
Confidence 3578999999999999999999999999999899999999999999999999987643
No 45
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=99.44 E-value=4.7e-14 Score=107.76 Aligned_cols=54 Identities=37% Similarity=0.774 Sum_probs=51.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.
T Consensus 5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 58 (59)
T 2g6f_X 5 SVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVRE 58 (59)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEE
T ss_pred cEEEECceeCCCCcCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEE
Confidence 478999999999999999999999999999999999999999999999999974
No 46
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=7.6e-14 Score=109.87 Aligned_cols=56 Identities=18% Similarity=0.274 Sum_probs=53.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
.+++|+|+|.++.++||+|++||+|.|+++.+++||.|+.+|+.||||++||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 2dmo_A 8 EAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVS 63 (68)
T ss_dssp EEEEECSSCCCCSSSSCCCCTTCEEEECEECSSSCEEEEETTEEEEECSTTEEECC
T ss_pred CEEEECcCCCcCCcCCCCCCCCCEEEEEEeCCCCEEEEEeCCCEEEeehHHeEECC
Confidence 57999999999999999999999999999999999999999999999999998764
No 47
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=99.44 E-value=7.5e-14 Score=109.92 Aligned_cols=57 Identities=30% Similarity=0.461 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 2djq_A 7 GPRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVIS 63 (68)
T ss_dssp CCEEEECSCCCSCCTTCCCCCTTCEEEEEECCCSSEEEEEETTEEEEEESSSEETTC
T ss_pred ceEEEECCCCCCCCcCCccCCCCCEEEEEEecCCCEEEEEECCcEEEeehHHEEEcC
Confidence 367999999999999999999999999999989999999999999999999998764
No 48
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=99.44 E-value=4.1e-14 Score=108.47 Aligned_cols=54 Identities=28% Similarity=0.549 Sum_probs=51.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVR 231 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~ 231 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~ 59 (60)
T 2gnc_A 6 PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIV 59 (60)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEE
T ss_pred CEEEEECCCCCcCCcCCcCCCCCCEEEEEEecCCCEEEEEECCeEEEEeHhhEE
Confidence 367999999999999999999999999999988999999999999999999996
No 49
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=99.43 E-value=5.1e-14 Score=107.13 Aligned_cols=55 Identities=25% Similarity=0.638 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
.+++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 57 (58)
T 1zx6_A 3 EYVEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVKPA 57 (58)
T ss_dssp CEEEECSCBCCCSTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred eEEEECceECCCCCCCccCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEc
Confidence 4689999999999999999999999999998999999999999999999999753
No 50
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=7.2e-14 Score=111.32 Aligned_cols=57 Identities=26% Similarity=0.526 Sum_probs=53.6
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.||||.+||+.+.
T Consensus 9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 65 (72)
T 2dl8_A 9 PIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQD 65 (72)
T ss_dssp CEEEEESSCBCCSSSSBCCBCTTCEEEEEEEEETTEEEEEETTEEEEECSSSEEECC
T ss_pred CEEEEECccCCcCCCCEeccCCCCEEEEEeecCCCEEEEEECCEEEEEchHHeEEcC
Confidence 478999999999999999999999999999988999999999999999999998653
No 51
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=99.43 E-value=5.7e-14 Score=107.68 Aligned_cols=54 Identities=28% Similarity=0.600 Sum_probs=51.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.
T Consensus 6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 59 (60)
T 2xmf_A 6 PQCKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTK 59 (60)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEE
T ss_pred cEEEECccCCcCCcCCcCCCCCCEEEEEEecCCCEEEEEECCEEEEEcHHHEEE
Confidence 578999999999999999999999999999999999999999999999999974
No 52
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=99.43 E-value=7.5e-14 Score=108.51 Aligned_cols=56 Identities=23% Similarity=0.548 Sum_probs=51.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
...++|+|+|.++.++||+|++||+|.|+.+. +++||.|+.+|+.||||++||+.+
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~l 63 (64)
T 2jte_A 6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI 63 (64)
T ss_dssp SEEEEESSCBCCSSSSBCCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred CEEEEECccCCccCCCccCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHHHEEEC
Confidence 36799999999999999999999999999885 689999999999999999999764
No 53
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=99.42 E-value=6e-14 Score=106.79 Aligned_cols=55 Identities=35% Similarity=0.683 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.||||++||+.+
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 57 (58)
T 1sem_A 3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY 57 (58)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred eEEEECcCCCCCCCCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEechHHeEEC
Confidence 4689999999999999999999999999998899999999999999999999754
No 54
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=99.42 E-value=7.8e-14 Score=106.14 Aligned_cols=54 Identities=31% Similarity=0.642 Sum_probs=51.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|+.+.+++||.|+.+|+.||||++||+.
T Consensus 4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~ 57 (58)
T 2drm_A 4 IQVKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQD 57 (58)
T ss_dssp EEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEE
T ss_pred cEEEECccCCCCCcCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEE
Confidence 679999999999999999999999999999889999999999999999999974
No 55
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=99.42 E-value=8.6e-14 Score=105.89 Aligned_cols=55 Identities=29% Similarity=0.601 Sum_probs=52.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
+.|+|+|+|.++.++||+|++||+|.|++..+++||.|..+|+.||||++||+..
T Consensus 2 ~~a~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~ 56 (58)
T 4e6r_A 2 IPAFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEE 56 (58)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred EEEEECccCCCCCCCEeeEeCCCEEEEeEcCCCCEEEEEECCcEEEEehHHEEEC
Confidence 5789999999999999999999999999999999999999999999999999754
No 56
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=99.42 E-value=7.7e-14 Score=108.65 Aligned_cols=55 Identities=24% Similarity=0.571 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+ .+|+.||||++||+..
T Consensus 4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 59 (65)
T 1b07_A 4 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 59 (65)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred eEEEECCcCCCCCCCccCCcCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeec
Confidence 578999999999999999999999999999899999999 7999999999999754
No 57
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=99.42 E-value=8.5e-14 Score=112.17 Aligned_cols=58 Identities=33% Similarity=0.601 Sum_probs=53.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCC---ccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGE---ASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g---~~G~~P~~~v~~~~s 235 (630)
..+|+|+|+|.++.++||+|++||+|.|+++.+++||.|++.+ +.||||++||+.+..
T Consensus 10 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~ 70 (76)
T 2ed1_A 10 VRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD 70 (76)
T ss_dssp CEEEEESSCCCCSSSSBCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECCC
T ss_pred CeEEEECccCCCCCcCCcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECCC
Confidence 4689999999999999999999999999998889999999766 999999999987643
No 58
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=99.42 E-value=8.2e-14 Score=107.54 Aligned_cols=55 Identities=40% Similarity=0.768 Sum_probs=52.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+..|+.||||++||+..
T Consensus 6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 60 (62)
T 1uj0_A 6 RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTTD 60 (62)
T ss_dssp EEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEESC
T ss_pred eEEEECccCCCCCcCCcCCCCCCEEEEEEeCCCCEEEEEECCCEEEechhHEEEe
Confidence 6799999999999999999999999999998899999999999999999999754
No 59
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=99.42 E-value=2.6e-14 Score=115.54 Aligned_cols=57 Identities=40% Similarity=0.655 Sum_probs=53.3
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.||||++||+.+.
T Consensus 18 ~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~~~~~gWw~g~~~g~~G~fP~nyV~~~~ 74 (79)
T 1z9q_A 18 APRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILK 74 (79)
T ss_dssp CCCEEESSCCCCSSTTBCCCCTTCCBCCCEESSSSEEEEEETTEEEEEEGGGEEESS
T ss_pred ceEEEEcCccCCCCCCcccccCCCEEEEeEecCCCEEEEEECCeEEEecHHHEEECC
Confidence 356899999999999999999999999999999999999999999999999998763
No 60
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=99.41 E-value=8.8e-14 Score=105.42 Aligned_cols=54 Identities=24% Similarity=0.593 Sum_probs=50.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+ .+|+.||||++||+.
T Consensus 2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~ 56 (57)
T 1cka_A 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56 (57)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred cEEEECCcCCCCCCCCCCCCCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEE
Confidence 368899999999999999999999999999889999998 799999999999974
No 61
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=99.41 E-value=1.8e-13 Score=108.59 Aligned_cols=54 Identities=43% Similarity=0.793 Sum_probs=51.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVR 231 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~ 231 (630)
...|+|+|+|.++.++||+|++||+|.|+...+++||.|+..|+.||||++||+
T Consensus 17 ~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~fP~~yV~ 70 (72)
T 2l0a_A 17 ARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVT 70 (72)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEEEEETTEEEEECSSCEEECTTCCEE
T ss_pred CeEEEECCccCCCCCCccCCCCCCEEEEEEecCCCEEEEEECCCEEEechhhCc
Confidence 467999999999999999999999999999988999999999999999999996
No 62
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=108.40 Aligned_cols=56 Identities=30% Similarity=0.570 Sum_probs=53.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 62 (68)
T 1x2k_A 7 GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQ 62 (68)
T ss_dssp SEEEEESSCCCCCSTTBCCCCSSCEEEEEECSCSSEEEEESSSCEEEEETTTEEEC
T ss_pred cEEEEECceECCCCCCcccCCCCCEEEEEEcCCCCEEEEEECCcEEEEehHHeEEc
Confidence 46899999999999999999999999999998899999999999999999999865
No 63
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=99.41 E-value=7.8e-14 Score=110.19 Aligned_cols=56 Identities=36% Similarity=0.658 Sum_probs=52.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec---CCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL---DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~---~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|+|.++.++||+|++||+|.|+... +++||.|+.+|+.||||++||+.+.
T Consensus 4 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 62 (69)
T 1wyx_A 4 VLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILV 62 (69)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEETTGGGCTTEEEEEETTEEEEEEGGGEEEEE
T ss_pred EEEEECccCCcCCCCccCCcCCCEEEEeECCCCCCCCcEEEEECCcEEEechhhEEECC
Confidence 5799999999999999999999999999987 7999999999999999999998763
No 64
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=2e-13 Score=110.52 Aligned_cols=57 Identities=26% Similarity=0.517 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|+++.+++||.|+.+|+.||||.+||+.+.
T Consensus 17 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~ 73 (78)
T 2ed0_A 17 LEKVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESIS 73 (78)
T ss_dssp SEEEEECSCBCCSSTTBCCBCSSCEEEEEEECSSSEEEEEETTEEEEEETTSEEECS
T ss_pred CEEEEECccCCccCcCcccccCCCEEEEEEeCCCCEEEEEECCcEEEeChHHEEEcC
Confidence 357999999999999999999999999999999999999999999999999998763
No 65
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=99.41 E-value=8.4e-14 Score=108.60 Aligned_cols=55 Identities=33% Similarity=0.700 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 10 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 64 (65)
T 3ulr_B 10 ITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELR 64 (65)
T ss_dssp SCEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred eEEEEEeeECCCCcCEeeEecCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEC
Confidence 4689999999999999999999999999999999999999999999999999764
No 66
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=99.41 E-value=7.9e-14 Score=106.09 Aligned_cols=55 Identities=38% Similarity=0.747 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 57 (58)
T 2vwf_A 3 TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAV 57 (58)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred eEEEECceECCCCcCCcCCCCCCEEEEEEcCCCCEEEEEECCcEEEEchHHeEEC
Confidence 4689999999999999999999999999998899999999999999999999754
No 67
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=99.41 E-value=8.7e-14 Score=106.66 Aligned_cols=54 Identities=37% Similarity=0.716 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++.. +++||.|+.+|+.||||++||+.
T Consensus 4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 59 (60)
T 1oot_A 4 PKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 59 (60)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEE
T ss_pred cEEEECccCCcCCcCEeeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEE
Confidence 5789999999999999999999999999986 68999999999999999999975
No 68
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=99.41 E-value=9.5e-14 Score=109.32 Aligned_cols=56 Identities=23% Similarity=0.447 Sum_probs=51.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCC-----ccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGE-----ASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g-----~~G~~P~~~v~~~ 233 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|++.+ +.||||+|||+.+
T Consensus 7 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~ 67 (68)
T 1tg0_A 7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ 67 (68)
T ss_dssp SEEEEESSCBCCSCTTBCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred CEEEEECeeECcCCcCCCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence 3689999999999999999999999999999999999999765 9999999999753
No 69
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=99.41 E-value=1.2e-13 Score=112.44 Aligned_cols=57 Identities=25% Similarity=0.396 Sum_probs=53.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCC-cccccCCCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRD-WWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~-Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
.+|+|+|+|.++.++||+|++||+|.|++..+++ ||.|+.+|+.||||.|||+.+..
T Consensus 11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 68 (80)
T 2i0n_A 11 KYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILLS 68 (80)
T ss_dssp CEEEESSCBCCCSSSSCCBCSSEEEEEEEESSSSSEEEEEETTEEEEEEGGGEEEESS
T ss_pred eEEEECCCCCcCCCCCcCCCCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCC
Confidence 5799999999999999999999999999998877 99999999999999999987643
No 70
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=99.41 E-value=9.7e-14 Score=107.88 Aligned_cols=55 Identities=36% Similarity=0.762 Sum_probs=52.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.||||.+||+.+
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 61 (64)
T 2ak5_A 7 LVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 61 (64)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred EEEEEccccCCcCcCcccCCCCCEEEEeEecCCCEEEEEECCCEEEEehHHeEEc
Confidence 5799999999999999999999999999998999999999999999999999865
No 71
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.41 E-value=6.1e-14 Score=111.75 Aligned_cols=57 Identities=26% Similarity=0.444 Sum_probs=52.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEe-cCCCcccccCCCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDT-LDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
..|+|+|+|.++.++||+|++||+|.|+.. .+++||.|+.+|+.||||.|||+.+..
T Consensus 11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 68 (72)
T 1ugv_A 11 RKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSG 68 (72)
T ss_dssp CCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred cEEEEccccCCcCCCEeCCcCCCEEEEEEecCCCCeEEEEECCcEEEecHHHEEECCC
Confidence 568999999999999999999999999984 678999999999999999999987644
No 72
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.41 E-value=1.9e-13 Score=109.49 Aligned_cols=58 Identities=29% Similarity=0.713 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|+|.++.++||+|++||+|.|++. +++||.|+++|+.||||.+||+.+...
T Consensus 10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 67 (74)
T 1j3t_A 10 NLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIPGS 67 (74)
T ss_dssp CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSSEEEEESTTCCCEEEGGGEEECCCS
T ss_pred CeEEEECCCCCCCCCCccCCCCCCEEEEEec-CCCEEEEEECCcEEEEchHHeEECCCC
Confidence 3679999999999999999999999999998 579999999999999999999876443
No 73
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=99.41 E-value=1.1e-13 Score=105.35 Aligned_cols=55 Identities=33% Similarity=0.612 Sum_probs=51.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRL 232 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~ 232 (630)
...++|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.||||++||+.
T Consensus 3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 57 (58)
T 1zlm_A 3 VKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 57 (58)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEE
T ss_pred cEEEEECccCCCCCCCCccCCCCCEEEEEEeCCCCEEEEEECCCEEEEehHHEEe
Confidence 3579999999999999999999999999999889999999999999999999963
No 74
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=112.25 Aligned_cols=59 Identities=37% Similarity=0.695 Sum_probs=54.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|||.++.++||+|++||+|.|++..+++||.|++.|+.||||.+||+.+...
T Consensus 17 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 75 (88)
T 1x2q_A 17 ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNI 75 (88)
T ss_dssp CEEEEESSCCCCCSSSCCCCCSSCEEEEEECSCSSSEEEEETTEEEEECGGGEESCSSC
T ss_pred CeEEEEcccCCCCCcCccCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCc
Confidence 46799999999999999999999999999998899999999999999999999876443
No 75
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=110.48 Aligned_cols=57 Identities=25% Similarity=0.369 Sum_probs=52.3
Q ss_pred eEEEEEeeccCCCC-------CCCCCCCCCCEEEEEE-ecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAME-------AEELGFRAGDVIEVLD-TLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~-------~~eL~f~~gd~i~vl~-~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++. ++||+|++||+|.|+. ..+++||.|+++|+.||||+|||+.+.
T Consensus 7 ~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~ 71 (75)
T 2ege_A 7 GKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMS 71 (75)
T ss_dssp SEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEESSSCEEEEETTTEEECC
T ss_pred CcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEECCcEEEEChHHeEEcc
Confidence 36799999999999 9999999999999997 478999999999999999999998763
No 76
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=99.41 E-value=9e-14 Score=107.34 Aligned_cols=56 Identities=23% Similarity=0.550 Sum_probs=52.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~g~~G~~P~~yv~~~ 61 (62)
T 3ngp_A 6 KELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKL 61 (62)
T ss_dssp CCEEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred CEEEEECcCCCCCCCCCccCCCCCEEEEeEecCCCeEEEEECCEEEEEEHHHEEEC
Confidence 35789999999999999999999999999999999999999999999999999754
No 77
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.40 E-value=1.5e-13 Score=111.36 Aligned_cols=59 Identities=32% Similarity=0.629 Sum_probs=54.6
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+...
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 65 (78)
T 2yuo_A 7 GRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDER 65 (78)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEECCC
T ss_pred ceEEEECccCCCCCCCCccCCCCCEEEEEEecCCCEEEEEECCCEEEEehHHEEECCCc
Confidence 46799999999999999999999999999999999999999999999999999876443
No 78
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=1.5e-13 Score=108.13 Aligned_cols=56 Identities=30% Similarity=0.612 Sum_probs=52.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.||||++||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 1x2p_A 8 EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHS 63 (68)
T ss_dssp CEEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEECTTCCEEEESSSEECCC
T ss_pred CEEEECceECCCCcCCcCCCCCCEEEEEEcCCCCEEEEEECCeEEEEehHHeEECC
Confidence 57899999999999999999999999999989999999999999999999998653
No 79
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=99.40 E-value=1.8e-13 Score=107.73 Aligned_cols=57 Identities=26% Similarity=0.521 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 2dl3_A 7 GRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLS 63 (68)
T ss_dssp SEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSTTEEEEECSSCEEEEETTTEEECC
T ss_pred CcEEEECccCCCCCcCCccCCCCCEEEEeEecCCCEEEEEECCCEEEEchHHEEECC
Confidence 367999999999999999999999999999988999999999999999999998764
No 80
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=99.40 E-value=1.3e-13 Score=106.48 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=51.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+ .+|+.||||+|||+.+
T Consensus 4 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~ 60 (62)
T 2fpe_A 4 QTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEV 60 (62)
T ss_dssp CCEEECSCBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred CEEEECccCCccCcCcCcCCCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEEC
Confidence 358899999999999999999999999999999999998 6899999999999765
No 81
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=1.9e-13 Score=109.25 Aligned_cols=57 Identities=30% Similarity=0.527 Sum_probs=52.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe---cCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT---LDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~---~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|++. .+++||.|+.+|+.||||.+||+.+.
T Consensus 8 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 67 (73)
T 2dl7_A 8 VCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELS 67 (73)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECSSSEEECC
T ss_pred CEEEEECccCCcCCCCcCCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEEChHHEEECC
Confidence 4679999999999999999999999999998 47899999999999999999998763
No 82
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.40 E-value=1.8e-13 Score=108.35 Aligned_cols=57 Identities=26% Similarity=0.559 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..+|+|+|+|.++.++||+|++||+|.|++.. +++||.|+.+|+.||||.+||+.+.
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 65 (70)
T 2da9_A 7 GDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLS 65 (70)
T ss_dssp SEEEEECSCCCCSSTTBCCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGGGEEECC
T ss_pred CcEEEECcCCCCCCcCEeeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechHHeEECC
Confidence 36799999999999999999999999999985 7899999999999999999998763
No 83
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=99.40 E-value=1.1e-13 Score=103.64 Aligned_cols=52 Identities=27% Similarity=0.575 Sum_probs=49.0
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccCCCccccccccchh
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTRGEASGWFPSAFVR 231 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~g~~G~~P~~~v~ 231 (630)
.|+|+|+|.++.++||+|++||+|.|+...+ ++||.|+.+|+.||||++||+
T Consensus 2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yv~ 54 (54)
T 2a28_A 2 AMEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK 54 (54)
T ss_dssp EEEBCSCBCCCSTTBCCBCTTCEEEEEECCCSSSEEEEEETTEEEEEEGGGBC
T ss_pred EEEECccCCcCCCCCccCCCCCEEEEEEecCCCCEEEEEECCeEEEeeHHHcC
Confidence 4789999999999999999999999999986 799999999999999999984
No 84
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.6e-13 Score=109.06 Aligned_cols=57 Identities=25% Similarity=0.506 Sum_probs=53.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEec---CCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTL---DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~---~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..+|+|+|+|.++.++||+|++||+|.|++.. +++||.|+.+|+.||||.+||+.+.
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 66 (71)
T 2cre_A 7 GLLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQILS 66 (71)
T ss_dssp CEEEEESSCCCCSSSSBCCCCSSCCEEEEESCCTTSTTEEEEESSSCCEEEETTTEEECC
T ss_pred cEEEEECcccCcCCCCCCCCCCCCEEEEeEcCCCCCCCcEEEEECCCEEEEehHHEEECC
Confidence 46899999999999999999999999999987 8999999999999999999998763
No 85
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=99.39 E-value=1.3e-13 Score=109.95 Aligned_cols=57 Identities=35% Similarity=0.620 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|||.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 69 (72)
T 4glm_A 13 LTYGVALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCP 69 (72)
T ss_dssp CCEEEESSCBCCCSTTBCCBCTTCEEEEEEECSTTEEEEEETTEEEEEEGGGEEEEC
T ss_pred CeEEEECccCCCCCCCcCCCCCCCEEEEEEccCCCEEEEEECCcEEEEChHHeEECC
Confidence 357999999999999999999999999999999999999999999999999998763
No 86
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=2.3e-13 Score=110.53 Aligned_cols=57 Identities=32% Similarity=0.652 Sum_probs=53.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.||||.+||+.+.
T Consensus 17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 73 (79)
T 1x69_A 17 GITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQ 73 (79)
T ss_dssp CCCEEESSCCCCSSSSBCCCCTTCEEEEEEECSSSEEEEEETTEEEEEETTSEEECC
T ss_pred CeEEEECccCCCCCCCCcCcCCCCEEEEeEecCCCeEEEEECCcEEEechHHEEECC
Confidence 356999999999999999999999999999989999999999999999999998764
No 87
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.39 E-value=1.7e-13 Score=108.09 Aligned_cols=55 Identities=33% Similarity=0.622 Sum_probs=51.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++. +++||.|+.+|+.||||.+||+.+.
T Consensus 9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (69)
T 1uhf_A 9 EEYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWWTGSIGDRSGIFPSNYVKPKD 63 (69)
T ss_dssp EEEECSSCBCCSSSSBCCBCTTCEEEECEE-ETTEEEECSTTCCEEECGGGCEECC
T ss_pred CEEEEeeeECCCCcCccCCCCCCEEEEEEe-CCCEEEEEeCCcEEEEchHHeEECC
Confidence 578999999999999999999999999998 7899999999999999999998663
No 88
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=99.39 E-value=1.6e-13 Score=114.50 Aligned_cols=59 Identities=25% Similarity=0.602 Sum_probs=54.6
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.||||+|||+.+...
T Consensus 18 ~~~~~Alydy~a~~~~eLsf~~Gd~i~V~~~~~~gWw~g~~~g~~G~fPsnyV~~~~~~ 76 (92)
T 2o2o_A 18 RRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGE 76 (92)
T ss_dssp SCEEEECSCBCCCSSSCCCBCSSCEEECCCGGGSSCBCCEETTEECCBCSSSEECCSSC
T ss_pred CeEEEEccccCCCCCccccccCCCEEEEeEecCCCEEEEEECCeEEEeehHHEEECCCC
Confidence 35799999999999999999999999999998899999999999999999999877544
No 89
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=99.39 E-value=1e-13 Score=108.88 Aligned_cols=55 Identities=27% Similarity=0.655 Sum_probs=49.5
Q ss_pred eEEEEEeeccCCCCCC-CCCCCCCCEEEEEEecC-----CCcccccC-CCccccccccchhh
Q psy1488 178 VVLAEAVWDHVAMEAE-ELGFRAGDVIEVLDTLD-----RDWWWGTR-GEASGWFPSAFVRL 232 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~-eL~f~~gd~i~vl~~~~-----~~Ww~g~~-~g~~G~~P~~~v~~ 232 (630)
..+|+|+|+|.++.++ ||+|++||+|.|+++.+ ++||.|+. +|+.||||+|||+.
T Consensus 7 ~~~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~ 68 (69)
T 1nm7_A 7 HHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 68 (69)
T ss_dssp --CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEE
T ss_pred eeEEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEE
Confidence 3579999999999999 99999999999999875 49999997 89999999999974
No 90
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=99.39 E-value=2.1e-13 Score=106.61 Aligned_cols=54 Identities=28% Similarity=0.646 Sum_probs=50.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|||.++.++||+|++||+|.|++. +++||.|+ .+|+.||||+|||+.+
T Consensus 5 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~-~~~Ww~~~~~~g~~G~~Psnyv~~~ 59 (67)
T 2b86_A 5 VIVIAKWDYTAQQDQELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVERK 59 (67)
T ss_dssp EEEEESSCBCCSSTTSCCBCTTCEEEEEEC-SSSSCEEECTTSCEEECCCCSEEEC
T ss_pred eEEEEeeeECCCCCCccccCCCCEEEEEec-CCCeEEEEeCCCCEEEeChHHEeEc
Confidence 578999999999999999999999999998 57999999 6899999999999754
No 91
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=99.39 E-value=2.6e-13 Score=108.44 Aligned_cols=57 Identities=26% Similarity=0.563 Sum_probs=52.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..+|+|+|+|.++.++||+|++||+|.|+... +++||.|+.+|+.||||++||+.+.
T Consensus 9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 67 (73)
T 2k9g_A 9 KDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 67 (73)
T ss_dssp CEEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGGGEEECC
T ss_pred ccEEEECccCCCCCCCeeeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchHHEEECC
Confidence 36799999999999999999999999999985 7899999999999999999998763
No 92
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=99.39 E-value=1.4e-13 Score=109.36 Aligned_cols=57 Identities=21% Similarity=0.300 Sum_probs=52.3
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~~s 235 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+ .+|+.||||++||+.+..
T Consensus 7 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~~ 65 (71)
T 2fpf_A 7 QTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK 65 (71)
T ss_dssp CCEEECSCBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC-
T ss_pred eEEEECeeECccCCCcccCcCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECCC
Confidence 468899999999999999999999999999999999999 799999999999987643
No 93
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=99.39 E-value=1.4e-13 Score=112.55 Aligned_cols=57 Identities=30% Similarity=0.480 Sum_probs=52.1
Q ss_pred eEEEEEeecc-CCCCCCCCCCCCCCEEEEEEecCCCcccccCC------Cccccccccchhhcc
Q psy1488 178 VVLAEAVWDH-VAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG------EASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~-~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~------g~~G~~P~~~v~~~~ 234 (630)
..+|+|+|+| .++.++||+|++||+|.|++..+++||.|++. |+.||||+|||+.+.
T Consensus 18 ~~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~ 81 (83)
T 2ke9_A 18 SLKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS 81 (83)
T ss_dssp CEEEEESSCBCCCSCTTBCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred CeEEEEccccCCCCCCCcccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence 4689999999 89999999999999999999999999999964 799999999998653
No 94
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=99.39 E-value=1.8e-13 Score=106.65 Aligned_cols=55 Identities=24% Similarity=0.444 Sum_probs=51.4
Q ss_pred EEEEEeeccCC-CCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVA-MEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~-~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.+ +.++||+|++||+|.|+...+++||.|+ .+|+.||||+|||+.+
T Consensus 6 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~ 63 (65)
T 2j05_A 6 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63 (65)
T ss_dssp CEEEESSCBCCCTTSSBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred cEEEEccccCCCCCCCcCcCCCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEEC
Confidence 46899999999 9999999999999999999899999999 7899999999999754
No 95
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=99.39 E-value=1.5e-13 Score=112.26 Aligned_cols=57 Identities=25% Similarity=0.587 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|||.++.++||+|++||+|.|+...+++||.|..+|+.||||++||+.+.
T Consensus 17 ~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~ 73 (83)
T 1neg_A 17 KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLA 73 (83)
T ss_dssp CCEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred ceEEEEccccCCCCCCccccCCCCEEEEEEecCCCEEEEEECCeEEEEEHHHEEECC
Confidence 467999999999999999999999999999988999999999999999999998763
No 96
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.38 E-value=9.7e-14 Score=109.29 Aligned_cols=56 Identities=27% Similarity=0.634 Sum_probs=52.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.||||.+||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 1wi7_A 8 RRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELS 63 (68)
T ss_dssp CCEEESSCBCCSSTTBCCBCTTCEECCCEEEETTEEEECSTTCCEEEETTSEEECC
T ss_pred CEEEECccCCcCCCCCccCcCCCEEEEEEcCCCCeEEEEECCcEEEEchHHEEECC
Confidence 56899999999999999999999999999988999999999999999999998764
No 97
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.38 E-value=3.1e-13 Score=114.02 Aligned_cols=59 Identities=25% Similarity=0.360 Sum_probs=53.7
Q ss_pred eEEEEEeeccCCCC------CCCCCCCCCCEEEEE-EecCCCcccccC-CCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAME------AEELGFRAGDVIEVL-DTLDRDWWWGTR-GEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~------~~eL~f~~gd~i~vl-~~~~~~Ww~g~~-~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|+|.++. ++||+|++||+|.|+ ...+++||.|++ +|+.||||+|||+.+...
T Consensus 17 ~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~~ 83 (96)
T 1wie_A 17 VHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDN 83 (96)
T ss_dssp EEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCSC
T ss_pred CcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcCCC
Confidence 46899999999988 999999999999999 777899999998 999999999999877544
No 98
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=99.38 E-value=1.3e-13 Score=107.47 Aligned_cols=56 Identities=27% Similarity=0.655 Sum_probs=52.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 63 (65)
T 3u23_A 8 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELE 63 (65)
T ss_dssp CEEEECSCBCCSSTTBCCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEEECC
T ss_pred eEEEEeeeeCCCCcCCcCCCCCCEEEEEEecCCCEEEEEECCCEEEeehHHEEECc
Confidence 57999999999999999999999999999988999999999999999999998763
No 99
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.7e-13 Score=112.94 Aligned_cols=59 Identities=27% Similarity=0.507 Sum_probs=54.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe--cCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT--LDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~--~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..+|+|+|+|.++.++||+|++||+|.|+.. .+++||.|+++|+.||||+|||+.+...
T Consensus 8 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~ 68 (85)
T 2dlp_A 8 SGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAP 68 (85)
T ss_dssp CCEEEESSCBCCSSSSBCCBCTTCEEEECCCSCCCTTEEEEESSSCEEEEETTSEEECCCS
T ss_pred CEEEEECCCCCccCcCCccCcCCCEEEEEEccCCCCCeEEEEECCEEEEechHHeEECCCc
Confidence 3579999999999999999999999999987 7899999999999999999999877544
No 100
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=99.38 E-value=1.7e-13 Score=107.50 Aligned_cols=56 Identities=27% Similarity=0.576 Sum_probs=52.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
...++|+|+|.++.++||+|++||+|.|+...+++||.|+ .+|+.||||++||+.+
T Consensus 8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 64 (67)
T 1aww_A 8 LKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEA 64 (67)
T ss_dssp CCEEEBSSCCCCSSSSSCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCS
T ss_pred CeEEEECccCCCCCCCCccCCCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEc
Confidence 3579999999999999999999999999999889999998 7999999999999754
No 101
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=2.3e-13 Score=108.51 Aligned_cols=56 Identities=21% Similarity=0.356 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~~~ 234 (630)
..++|+|||.++.++||+|++||+|.|+++.++|||.|+.. |+.||||++||+.+.
T Consensus 6 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~ 63 (73)
T 2lcs_A 6 QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63 (73)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECC
T ss_pred CEEEECccCCCCCCCccCCcCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECC
Confidence 57999999999999999999999999999999999999974 899999999998764
No 102
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=3.2e-13 Score=109.84 Aligned_cols=58 Identities=26% Similarity=0.545 Sum_probs=53.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..++|+|+|.++.++||+|++||+|.|+++.+++||.|+++|+.||||++||+.+...
T Consensus 9 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~ 66 (80)
T 2ekh_A 9 TSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLDENE 66 (80)
T ss_dssp EEEEECSCBCCSSTTSCCBCTTCEEEEEEECTTSEEEEEETTEEEEEETTTEECCCCC
T ss_pred CEEEECCCCCCCCCCccCcCCCCEEEEEEeCCCCeEEEEECCCEEEEEhHHeEECCCC
Confidence 5789999999999999999999999999999999999999999999999999876443
No 103
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=99.38 E-value=1.4e-13 Score=105.90 Aligned_cols=56 Identities=30% Similarity=0.672 Sum_probs=51.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccc-cccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASG-WFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G-~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+.+|+.| |||++||+.+.
T Consensus 4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~gG~~P~~yv~~~~ 60 (61)
T 1y0m_A 4 SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI 60 (61)
T ss_dssp CCEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEEGGGEEECC
T ss_pred CEEEECcCCCcCCCCCcCCcCCCEEEEEEecCCCEEEEEECCeEEEEEChHHcEECC
Confidence 458999999999999999999999999999899999999999887 99999998653
No 104
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.4e-13 Score=110.72 Aligned_cols=57 Identities=30% Similarity=0.630 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecC--CCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD--RDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~--~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|+.+.+ ++||.|+++|+.||||.+||+.+.
T Consensus 17 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 75 (80)
T 2d8h_A 17 PIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNS 75 (80)
T ss_dssp CEEEECSSCEECSSTTBCEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBCC
T ss_pred CEEEEECccCCcCCCCeeeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEcC
Confidence 467999999999999999999999999999875 899999999999999999998653
No 105
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=99.38 E-value=3e-13 Score=106.15 Aligned_cols=57 Identities=26% Similarity=0.447 Sum_probs=52.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCC--ccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGE--ASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g--~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|+..+ +.||||++||+.+.
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 64 (67)
T 2o9s_A 6 TGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK 64 (67)
T ss_dssp SEEEEECSCBCCSSTTBCCBCTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred CEEEEECccCCcCCcCccCCCCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECC
Confidence 4679999999999999999999999999999889999999865 99999999998653
No 106
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=99.38 E-value=2.6e-13 Score=107.16 Aligned_cols=56 Identities=27% Similarity=0.535 Sum_probs=52.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 64 (69)
T 2dil_A 9 QEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLS 64 (69)
T ss_dssp CEEECCSCBCCSSSSSCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGCCBCC
T ss_pred cEEEECccCCccCcCccCCCCCCEEEEEECCCCCEEEEEECCCEEEEehHHeEEcC
Confidence 57899999999999999999999999999988999999999999999999998663
No 107
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=99.38 E-value=3.5e-13 Score=106.02 Aligned_cols=57 Identities=25% Similarity=0.498 Sum_probs=52.3
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|++. +++||.|+ .+|+.||||++||+.+..
T Consensus 7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~ 64 (68)
T 1wxt_A 7 GLKMQVLYEFEARNPRELTVVQGEKLEVLDH-SKRWWLVKNEAGRSGYIPSNILEPLSG 64 (68)
T ss_dssp CEEEEESSCBCCCSSSBCCBCTTCEEEEEEC-SSSEEEEECTTSCEEEEEGGGEECCCC
T ss_pred CeEEEECceECCCCcCcCCCCCCCEEEEEEc-CCCEEEEEECCCCEEEEEhHHcEECCC
Confidence 3679999999999999999999999999998 48999999 899999999999987643
No 108
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=99.38 E-value=2.1e-13 Score=108.98 Aligned_cols=55 Identities=33% Similarity=0.689 Sum_probs=52.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+
T Consensus 14 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~ 68 (73)
T 3c0c_A 14 PSCKALYDFEPENDGELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVL 68 (73)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEE
T ss_pred eEEEECccCCCCCCCCccCcCCCEEEEEEecCCCEEEEEECCCEEEeChHHEEEC
Confidence 5799999999999999999999999999999999999999999999999999865
No 109
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=2.9e-13 Score=109.88 Aligned_cols=58 Identities=28% Similarity=0.642 Sum_probs=54.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+...
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 65 (79)
T 2yun_A 8 RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSN 65 (79)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSCEEEESSSCEEEECSTTEEEESSC
T ss_pred CEEEECccCCcCCCCCcCCCCCCEEEEEEcCCCCEEEEEECCCEEEEEhHHeEECCCC
Confidence 6799999999999999999999999999998899999999999999999999877543
No 110
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.4e-13 Score=109.44 Aligned_cols=57 Identities=30% Similarity=0.634 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~s 235 (630)
...++|+|+|.++.++||+|++||+|.|++. +++||.|+. +|+.||||.+||+.+..
T Consensus 17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~gW~~g~~~~~g~~G~fP~~yv~~~~~ 75 (79)
T 1x6b_A 17 LPQVEITKAFFAKQADEVTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFISG 75 (79)
T ss_dssp CCEEEESSCCCCCSSSBCCCCTTEEEEEEEE-ETTEEEEEETTTCCEEEECGGGCEEEES
T ss_pred CCEEEECeeECCCCcCCcCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEchHHEEECCC
Confidence 4679999999999999999999999999999 899999997 89999999999987643
No 111
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.37 E-value=2.1e-13 Score=107.68 Aligned_cols=57 Identities=28% Similarity=0.507 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCcc-ccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEAS-GWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~-G~~P~~~v~~~~s 235 (630)
..++|+|+|.++.++||+|++||+|.|+++.+++||.|++.+.. ||||.+||+.+..
T Consensus 8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~ 65 (69)
T 2eqi_A 8 RTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG 65 (69)
T ss_dssp CEEEESSCBCCCSSSCCCBCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECCS
T ss_pred cEEEECeeECCCCcCccCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECcc
Confidence 57999999999999999999999999999988999999987766 9999999987643
No 112
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=99.37 E-value=3.7e-13 Score=106.91 Aligned_cols=56 Identities=27% Similarity=0.525 Sum_probs=52.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccC--CCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTR--GEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~--~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|+... +++||.|+. +|+.||||.+||+.+.
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 65 (71)
T 2jt4_A 7 KRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVR 65 (71)
T ss_dssp EEEEECSCBCCSSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred CEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECC
Confidence 6799999999999999999999999999987 899999997 8999999999998664
No 113
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=99.37 E-value=1.9e-13 Score=108.96 Aligned_cols=57 Identities=30% Similarity=0.653 Sum_probs=51.9
Q ss_pred EEEEEeeccCC-CCCCCCCCCCCCEEEEEEe-cCCCcccccCC--Cccccccccchhhccc
Q psy1488 179 VLAEAVWDHVA-MEAEELGFRAGDVIEVLDT-LDRDWWWGTRG--EASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~-~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~~--g~~G~~P~~~v~~~~s 235 (630)
..++|+|+|.+ +.++||+|++||+|.|+.. .+++||.|++. |+.||||++||+.+..
T Consensus 8 ~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~ 68 (72)
T 1spk_A 8 QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG 68 (72)
T ss_dssp CEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred eEEEEeeeeCCCCCCCCCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCC
Confidence 57999999996 8999999999999999987 78999999976 9999999999987643
No 114
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=99.37 E-value=2.5e-13 Score=104.09 Aligned_cols=54 Identities=28% Similarity=0.568 Sum_probs=50.3
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEe-cCCCcccccC--CCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDT-LDRDWWWGTR--GEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~--~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++. .+++||.|+. +|+.||||++||+.
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~ 59 (60)
T 2v1q_A 3 ERGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 59 (60)
T ss_dssp CEEEECSCBCCCSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred cEEEEeeeECCCCCCCccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEE
Confidence 468999999999999999999999999998 4899999997 89999999999974
No 115
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=99.36 E-value=2.4e-13 Score=106.61 Aligned_cols=55 Identities=27% Similarity=0.559 Sum_probs=51.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|+...+++||.|+ .+|+.||||++||+.+
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 58 (67)
T 1gl5_A 3 EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK 58 (67)
T ss_dssp SCEEECSCBCCSSSSBCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred eEEEECccCCCCCCCeecCCcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence 358899999999999999999999999999889999999 6999999999999875
No 116
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.36 E-value=1.5e-13 Score=110.81 Aligned_cols=57 Identities=32% Similarity=0.636 Sum_probs=53.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+++|+.||||.+||+.+.
T Consensus 10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 66 (76)
T 1ujy_A 10 QLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK 66 (76)
T ss_dssp CEEEECCSCBCCSSTTSCCBCSSCCEEESSCCSSSCEEEEETTEEEEECTTTSEECC
T ss_pred CEEEEECccCCcCCCCcccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEECC
Confidence 467999999999999999999999999999988999999999999999999998763
No 117
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=99.36 E-value=1.3e-13 Score=104.94 Aligned_cols=52 Identities=17% Similarity=0.382 Sum_probs=49.1
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccC--CCccccccccchh
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTR--GEASGWFPSAFVR 231 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~--~g~~G~~P~~~v~ 231 (630)
.|+|+|+|.++.++||+|++||+|.|+...+ ++||.|+. +|+.||||++||+
T Consensus 3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~ 57 (58)
T 1zuu_A 3 ENKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 57 (58)
T ss_dssp CCEECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred EEEEeeeECCcCCCcccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence 4789999999999999999999999999887 79999997 9999999999996
No 118
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.36 E-value=4.1e-13 Score=108.48 Aligned_cols=58 Identities=22% Similarity=0.424 Sum_probs=53.4
Q ss_pred EEEEEeeccCCC-CCCCCCCCCCCEEEEEEec-CCCccccc-CCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAM-EAEELGFRAGDVIEVLDTL-DRDWWWGT-RGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~-~~~eL~f~~gd~i~vl~~~-~~~Ww~g~-~~g~~G~~P~~~v~~~~s~ 236 (630)
..++|+|+|.++ .++||+|++||+|.|+... +++||.|+ .+|+.||||.+||+.+...
T Consensus 10 ~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~~ 70 (77)
T 2enm_A 10 TKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPND 70 (77)
T ss_dssp EEEEESSCCCCCTTSSBCCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECCC
T ss_pred cEEEECccCCCCCCCCeecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCCC
Confidence 689999999999 9999999999999999985 79999999 8999999999999877544
No 119
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3e-13 Score=103.28 Aligned_cols=55 Identities=22% Similarity=0.371 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+.. |+.||||++||+.+
T Consensus 2 ~~~~al~d~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~ 58 (59)
T 1yn8_A 2 QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI 58 (59)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred CEEEECccCCCCCCCCcCCCCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence 46899999999999999999999999999988999999974 89999999999754
No 120
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=99.36 E-value=2.6e-13 Score=110.45 Aligned_cols=58 Identities=24% Similarity=0.570 Sum_probs=53.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+...
T Consensus 3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 60 (80)
T 2pqh_A 3 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPA 60 (80)
T ss_dssp EEEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCC-
T ss_pred eEEEECccCCCCCCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEcCCC
Confidence 4689999999999999999999999999998899999999999999999999877443
No 121
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=4.3e-13 Score=107.64 Aligned_cols=56 Identities=25% Similarity=0.507 Sum_probs=51.2
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC----CCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR----GEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~----~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++ ++||+|++||+|.|+++.+++||.|+. +|+.||||++||+.+.
T Consensus 10 ~~~~~alydy~~~-~~eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~ 69 (75)
T 2egc_A 10 KDVYVSIADYEGD-EETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKN 69 (75)
T ss_dssp CEEEEECSCBCCC-SSSCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECC
T ss_pred CeEEEECCCcCCC-CCcCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECC
Confidence 4679999999999 999999999999999999999999996 5799999999998763
No 122
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=99.36 E-value=3e-13 Score=107.42 Aligned_cols=55 Identities=24% Similarity=0.485 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEE-ecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLD-TLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~-~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..++|+|||.++.++||+|++||+|.|++ ..+++||.|+ .+|+.||||++||+..
T Consensus 12 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 68 (71)
T 1csk_A 12 TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKR 68 (71)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC-
T ss_pred CEEEEceeECcCCCCcCCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEc
Confidence 57999999999999999999999999999 6789999999 7999999999999754
No 123
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=99.36 E-value=2.9e-13 Score=102.92 Aligned_cols=53 Identities=28% Similarity=0.530 Sum_probs=49.6
Q ss_pred EEEEeecc-CCCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhh
Q psy1488 180 LAEAVWDH-VAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRL 232 (630)
Q Consensus 180 ~~~aly~~-~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~ 232 (630)
.++|+|+| .+..++||+|++||+|.|+...+++||.|+.. |+.||||++||+.
T Consensus 2 ~~~al~d~~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~ 57 (58)
T 1zuy_A 2 MFEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57 (58)
T ss_dssp EEEESSCBCCCSCTTBCCBCTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred EEEEecccCCCCCCCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence 58899999 89999999999999999999999999999976 9999999999963
No 124
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=3.5e-13 Score=108.53 Aligned_cols=57 Identities=28% Similarity=0.454 Sum_probs=52.2
Q ss_pred eEEEEEeeccCCCC-------CCCCCCCCCCEEEEEEecC-CCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAME-------AEELGFRAGDVIEVLDTLD-RDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~-------~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++. ++||+|++||+|.|+.+.+ ++||.|+++|+.||||++||+.+.
T Consensus 7 ~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~ 71 (76)
T 2csi_A 7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVS 71 (76)
T ss_dssp SEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEETTEEEEEEGGGCCBCC
T ss_pred ccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEECCcEEEEehHHEEECC
Confidence 46799999999998 9999999999999999876 489999999999999999998764
No 125
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=99.36 E-value=2.3e-13 Score=108.77 Aligned_cols=56 Identities=32% Similarity=0.682 Sum_probs=52.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
.+++|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.||||.+||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (73)
T 2dbm_A 8 PCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILV 63 (73)
T ss_dssp CEEEESSCBCCCSTTCCCBCTTCEEECCBCSSSSEEEEEETTEEEEEESSSEEESS
T ss_pred CEEEEccccCCCCCCCccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEEcc
Confidence 57999999999999999999999999999989999999999999999999998763
No 126
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=99.36 E-value=1.2e-12 Score=108.08 Aligned_cols=56 Identities=29% Similarity=0.593 Sum_probs=51.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.++||+|++||+|.|++.. ++||.|+. +|+.||||.+||+.+.
T Consensus 25 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~ 82 (86)
T 2oi3_A 25 DIIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD 82 (86)
T ss_dssp SEEEEESSCCCCSSSSCCCCCTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGG
T ss_pred CcEEEECccCCCCCCCcCcCCCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEcc
Confidence 36899999999999999999999999999988 69999998 9999999999998663
No 127
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=99.36 E-value=3.8e-13 Score=106.21 Aligned_cols=58 Identities=21% Similarity=0.373 Sum_probs=52.3
Q ss_pred EEEEEeeccC-CCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhhcccc
Q psy1488 179 VLAEAVWDHV-AMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~-~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~~~s~ 236 (630)
..++|+|+|. +..++||+|++||+|.|++..+++||.|+.. |+.||||++||+.+...
T Consensus 3 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~~ 63 (69)
T 1ruw_A 3 PKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDT 63 (69)
T ss_dssp SEEEESSCBCCCSCTTBCCBCTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECCSC
T ss_pred cEEEEccccCCCCCCCcccCCCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcCCc
Confidence 4689999995 9999999999999999999999999999976 99999999999866443
No 128
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=99.36 E-value=2.4e-13 Score=106.71 Aligned_cols=55 Identities=29% Similarity=0.723 Sum_probs=49.6
Q ss_pred EEEEEeeccCCCCCCC-CCCCCCCEEEEEEe-cCCCccccc--CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEE-LGFRAGDVIEVLDT-LDRDWWWGT--RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~e-L~f~~gd~i~vl~~-~~~~Ww~g~--~~g~~G~~P~~~v~~~ 233 (630)
.+|+|+|+|.+..++| |+|++||+|.|+.. .+++||.|+ .+|+.||||+|||+.+
T Consensus 8 ~~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l 66 (67)
T 3rnj_A 8 MRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL 66 (67)
T ss_dssp CEEEESSCBCCCSCTTBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred eEEEEccccCCCCCCCCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence 5799999999998787 99999999999964 578999999 7899999999999764
No 129
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.36 E-value=4.9e-13 Score=108.56 Aligned_cols=55 Identities=25% Similarity=0.534 Sum_probs=51.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecC----CCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD----RDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~----~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+.+.+ ++||.|+.+|+.||||++||+.+
T Consensus 14 ~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 72 (79)
T 1uhc_A 14 QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKT 72 (79)
T ss_dssp CCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEEC
T ss_pred eEEEECccCCCCCCCccCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEEC
Confidence 46889999999999999999999999999876 89999999999999999999865
No 130
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=99.36 E-value=2.3e-13 Score=104.24 Aligned_cols=54 Identities=31% Similarity=0.575 Sum_probs=49.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccCC-Cccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTRG-EASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~-g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++..+ ++||.|+.. |+.||||++||+.
T Consensus 4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~ 59 (60)
T 2x3w_D 4 VRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA 59 (60)
T ss_dssp CEEEECSCBCCSSSSBCCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC
T ss_pred CEEEECcccCccCCCcccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEE
Confidence 56899999999999999999999999998865 599999987 9999999999974
No 131
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=2.8e-13 Score=107.25 Aligned_cols=56 Identities=25% Similarity=0.618 Sum_probs=52.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 64 (70)
T 2ega_A 9 EQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQN 64 (70)
T ss_dssp BCEECCSCCCCCSSSSCCCCTTCBCEEEEECTTSEEEEECSSCEEEEEGGGCEESC
T ss_pred cEEEECceECCCCCCcccCCCCCEEEEEEccCCCeEEEEECCCEEEEehHHcEECC
Confidence 46899999999999999999999999999999999999999999999999998653
No 132
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.35 E-value=1.8e-13 Score=114.73 Aligned_cols=59 Identities=29% Similarity=0.577 Sum_probs=53.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhccccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLRVSQE 237 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~~s~e 237 (630)
..++|+|||.++.++||+|++||+|.|+++. +++||.|+++|+.||||.|||+.+...+
T Consensus 6 ~~~~Alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~ 66 (93)
T 1uff_A 6 SGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSE 66 (93)
T ss_dssp CCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSSS
T ss_pred EEEEECccCCCCCCCCcCCCCCCEEEEeEccCCCCCEEEEEECCCEEEechHHeEEcCCcc
Confidence 5689999999999999999999999999986 7899999999999999999999875543
No 133
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=99.35 E-value=3.4e-13 Score=107.14 Aligned_cols=58 Identities=22% Similarity=0.550 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe--cCCCccccc-CCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT--LDRDWWWGT-RGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~--~~~~Ww~g~-~~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.+..++||+|++||+|.|+.. .+++||.|+ .+|+.||||++||+.+..
T Consensus 6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~ 66 (71)
T 1u5s_A 6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD 66 (71)
T ss_dssp SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred cEEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECCC
Confidence 3579999999999999999999999999998 678999997 899999999999987643
No 134
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=99.35 E-value=3.1e-13 Score=106.67 Aligned_cols=55 Identities=31% Similarity=0.633 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+. +|+.||||++||+..
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 62 (69)
T 4esr_A 7 PTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASE 62 (69)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEH
T ss_pred CEEEECccCCCCCcCcCCCCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEEC
Confidence 5799999999999999999999999999999999999997 999999999999754
No 135
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=2.8e-13 Score=108.21 Aligned_cols=56 Identities=34% Similarity=0.720 Sum_probs=51.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|+|.++.++||+|++||+|.|++.. +++||.|+.+|+.||||.+||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 65 (73)
T 2dm1_A 8 GTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEG 65 (73)
T ss_dssp SEEEESSCBCCCSTTBCCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECSSSEEECC
T ss_pred CEEEECccCCcCCCCcCCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeehHHEEEcC
Confidence 5699999999999999999999999999987 4599999999999999999998753
No 136
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=99.35 E-value=2.3e-13 Score=106.10 Aligned_cols=55 Identities=27% Similarity=0.614 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC--------Cccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--------EASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--------g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|+...+++||.|+.. |+.||||++||+.+
T Consensus 2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l 64 (65)
T 2oaw_A 2 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL 64 (65)
T ss_dssp EEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred cEEEEcccCCccCCCCCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence 36899999999999999999999999999989999999976 89999999999754
No 137
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=99.35 E-value=3.4e-13 Score=107.74 Aligned_cols=56 Identities=25% Similarity=0.589 Sum_probs=52.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+.
T Consensus 6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 61 (73)
T 3thk_A 6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 61 (73)
T ss_dssp CEEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred EEEEECcCCCcCCCCccCCCCCCEEEEEECCCCCeEEEEECCcEEEEehHHeEECC
Confidence 57899999999999999999999999999989999999999999999999998764
No 138
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=5e-13 Score=111.37 Aligned_cols=58 Identities=24% Similarity=0.432 Sum_probs=53.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC--Cccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG--EASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~--g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|++. |+.||||.+||+.+..
T Consensus 17 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~~ 76 (90)
T 2yup_A 17 YGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSRE 76 (90)
T ss_dssp SEEEEECSCCCCCSSSBCCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEEC
T ss_pred ceEEEEeecCCcCCcCcCCCCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence 468999999999999999999999999999988999999986 9999999999987643
No 139
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=6e-13 Score=107.71 Aligned_cols=57 Identities=21% Similarity=0.451 Sum_probs=52.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccCC-Cccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTRG-EASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~-g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|++..+ ++||.|+.. |+.||||.+||+.+.
T Consensus 13 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~ 71 (78)
T 2dl5_A 13 PLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPT 71 (78)
T ss_dssp SEEEEECSCBCCCSTTBCCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSC
T ss_pred CcEEEEceeECCCCCCCCCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECC
Confidence 367999999999999999999999999999975 899999976 999999999998764
No 140
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.35 E-value=7.6e-13 Score=107.95 Aligned_cols=57 Identities=32% Similarity=0.536 Sum_probs=52.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe--cCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT--LDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~--~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|+.. .+++||.|+.+|+.||||.+||+.+.
T Consensus 17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 75 (81)
T 1x43_A 17 NRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLN 75 (81)
T ss_dssp CEEEEESSCCCCSSTTBCCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECC
T ss_pred CeEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECC
Confidence 3679999999999999999999999999998 46899999999999999999998763
No 141
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=99.35 E-value=2.6e-13 Score=103.97 Aligned_cols=54 Identities=31% Similarity=0.606 Sum_probs=50.3
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhcc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~ 234 (630)
.++|+|+|.++.++||+|++||+|.|+.. +++||.|+ .+|+.||||++||+.+.
T Consensus 3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~ 57 (60)
T 1i07_A 3 YAKSKYDFVARNSSELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57 (60)
T ss_dssp EEEESSCBCCSSTTBCCBCTTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred EEEECccCCCCCCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEcc
Confidence 58899999999999999999999999999 89999997 68999999999998664
No 142
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=99.35 E-value=4.8e-13 Score=104.25 Aligned_cols=55 Identities=22% Similarity=0.550 Sum_probs=51.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
...++|+|+|.+..++||+|++||+|.|++.. ++||.|+. +|+.||||++||+.+
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~ 63 (65)
T 1w1f_A 7 GDIVVALYPYDGIHPDDLSFKKGEKMKVLEEH-GEWWKAKSLLTKKEGFIPSNYVAKL 63 (65)
T ss_dssp CEEEEESSCBCCCSSSCCCBCTTCEEEEEEEC-SSEEEEEETTTCCEEEEETTTEESC
T ss_pred CCEEEEceeECCcCCCcCCCCCCCEEEEEEcC-CCEEEEEECCCCCEEEEEhhHEEEC
Confidence 36799999999999999999999999999998 99999997 999999999999865
No 143
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=99.35 E-value=1.6e-12 Score=107.26 Aligned_cols=53 Identities=28% Similarity=0.641 Sum_probs=49.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~ 232 (630)
..|+|+|+|.++.++||+|++||+|.|++. +++||.|+ .+|+.||||++||+.
T Consensus 32 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~ 85 (86)
T 2jxb_A 32 VIVIAKWDYTAQQDQELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVER 85 (86)
T ss_dssp EEEEESSCCCCCSSSBCCCCTTEEEEEEEC-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred eEEEECccCCCCCCCEeccCCCCEEEEEec-CCCeEEEEECCCCEEEeehHHEEe
Confidence 679999999999999999999999999997 78999999 689999999999963
No 144
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=99.34 E-value=1.7e-13 Score=109.44 Aligned_cols=55 Identities=25% Similarity=0.523 Sum_probs=50.8
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
.|+|+|+|.+ .++||+|++||+|.|+++.+++||.|+.+|+.||||++||+.+..
T Consensus 2 ~a~alydy~~-~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 56 (73)
T 2kxd_A 2 GAPPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDS 56 (73)
T ss_dssp CCCCCCSSCC-CSCCCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCS
T ss_pred eEEEeeeeCC-CCCEeeEcCCCEEEEEEecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence 4789999998 899999999999999999999999999999999999999987643
No 145
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=99.34 E-value=3.9e-13 Score=104.10 Aligned_cols=55 Identities=27% Similarity=0.505 Sum_probs=50.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|+.+. +++||.|+.+|+.||||++||+.+
T Consensus 6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~ 61 (63)
T 3eg3_A 6 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPV 61 (63)
T ss_dssp TEEEESSCBCCCSSSBCCBCTTCEEEEEEECTTSSEEEEEETTEEEEEEGGGEEES
T ss_pred EEEEEcceECCCCCCccCCCCCCEEEEEEeCCCCCeEEEEECCCeEEEehHHeEEC
Confidence 4689999999999999999999999999954 567999999999999999999765
No 146
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=7.8e-13 Score=109.63 Aligned_cols=57 Identities=26% Similarity=0.560 Sum_probs=53.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
.+.|+|+|+|.++.++||+|++||+|.|+.+.+++||.|+++|+.||||.+||+.+.
T Consensus 17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~ 73 (88)
T 2cub_A 17 NMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEG 73 (88)
T ss_dssp CEEEEESSCCCCCSTTBCCCCTTEEEEEEEECTTSEEEEEETTEEEEEEGGGEEECC
T ss_pred CCEEEEccccCCCCCCCcCCCCCCEEEEEEccCCCeEEEEECCcEEEEehHHEEECC
Confidence 367999999999999999999999999999999999999999999999999998764
No 147
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=99.34 E-value=1.1e-12 Score=109.61 Aligned_cols=59 Identities=22% Similarity=0.535 Sum_probs=53.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe--cCCCccccc-CCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT--LDRDWWWGT-RGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~--~~~~Ww~g~-~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|+|.++.++||+|++||+|.|+++ .+++||.|+ .+|+.||||.+||+.+...
T Consensus 17 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~ 78 (91)
T 1wx6_A 17 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 78 (91)
T ss_dssp CEEEEESSCCCCSSSSBCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEES
T ss_pred cEEEEEeecCCcCCCCcccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCCc
Confidence 4679999999999999999999999999998 678999998 7999999999999876443
No 148
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=99.34 E-value=4.6e-13 Score=106.96 Aligned_cols=55 Identities=27% Similarity=0.634 Sum_probs=51.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+. +|+.||||.+||+.+
T Consensus 16 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~ 72 (73)
T 3h0h_A 16 TLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV 72 (73)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred EEEEECccCCCCCCCcceEeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEEC
Confidence 5788999999999999999999999999999999999996 899999999999754
No 149
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=99.34 E-value=4.9e-12 Score=110.77 Aligned_cols=55 Identities=25% Similarity=0.552 Sum_probs=51.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC---CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR---GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~---~g~~G~~P~~~v~~~ 233 (630)
..+|+|+|+|.++.++||+|++||+|.|+++. ++||+|++ +|+.||||+|||+.+
T Consensus 59 ~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~~ 116 (119)
T 2rqr_A 59 ERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIK 116 (119)
T ss_dssp CEEEEBCSCBCCCSTTBCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCCC
T ss_pred ceEEEEccccCCCCCCcccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEEe
Confidence 46799999999999999999999999999986 69999998 899999999999865
No 150
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=99.34 E-value=4.1e-13 Score=108.83 Aligned_cols=58 Identities=26% Similarity=0.570 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~s~ 236 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+. +|+.||||++||+.+.+.
T Consensus 6 ~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~ 65 (79)
T 3cqt_A 6 TLFEALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRL 65 (79)
T ss_dssp CCEEESSCBCCCSTTBCCBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC---
T ss_pred cEEEECccCCCCCcCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCcc
Confidence 3588999999999999999999999999998999999997 999999999999876443
No 151
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=4.6e-13 Score=106.33 Aligned_cols=56 Identities=21% Similarity=0.459 Sum_probs=52.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+..|+.||||.+||+.+.
T Consensus 9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 64 (71)
T 2dnu_A 9 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAK 64 (71)
T ss_dssp EEEECSSCBCCSSTTBCCBCTTCEEEECCCCSSSEEEEEETTEEEEEEGGGCEECC
T ss_pred CEEEECCccCCCCCCCCcCCCCCEEEEeECCCCCeEEEEECCcEEEEEHHHeEEcc
Confidence 57899999999999999999999999999988999999999999999999998664
No 152
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=99.33 E-value=6e-13 Score=102.63 Aligned_cols=53 Identities=25% Similarity=0.533 Sum_probs=49.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~ 232 (630)
..++|+|+|.++.++||+|++||+|.|++.. ++||.|+ .+|+.||||++||+.
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~ 61 (62)
T 2iim_A 7 NLVIALHSYEPSHDGDLGFEKGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFVAK 61 (62)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEECC-SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred cEEEEcccCCCCCCCCcCCCCCCEEEEEEcC-CCEEEEEECCCCCEEEEEHHHEEE
Confidence 5789999999999999999999999999985 5999999 699999999999964
No 153
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=99.33 E-value=4.4e-13 Score=110.02 Aligned_cols=58 Identities=29% Similarity=0.512 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|+...+++||.|+. +|+.||||+|||+.+.+
T Consensus 6 ~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 65 (84)
T 4ag1_C 6 VTLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDS 65 (84)
T ss_dssp CCEEEESSCBCCSBTTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred CEEEEEcccCCCCCCCcccccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCC
Confidence 35789999999999999999999999999999999999997 89999999999987644
No 154
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=99.33 E-value=4.6e-13 Score=104.02 Aligned_cols=55 Identities=27% Similarity=0.587 Sum_probs=51.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+. +|+.||||++||+.+
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~ 63 (64)
T 4f14_A 7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV 63 (64)
T ss_dssp -CEEESSCBCCCSTTBCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred EEEEECeeeCCcCCCcCCCCCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEEC
Confidence 4689999999999999999999999999999999999997 899999999999754
No 155
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=99.33 E-value=3.2e-13 Score=105.99 Aligned_cols=55 Identities=33% Similarity=0.692 Sum_probs=50.5
Q ss_pred EEEEEeeccCC-CCCCCCCCCCCCEEEEEEe-cCCCcccccCC--Cccccccccchhhc
Q psy1488 179 VLAEAVWDHVA-MEAEELGFRAGDVIEVLDT-LDRDWWWGTRG--EASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~-~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~~--g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.| +.++||+|++||+|.|+.+ .+++||.|+.. |+.||||++||+.+
T Consensus 7 ~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~ 65 (67)
T 2kxc_A 7 QKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLL 65 (67)
T ss_dssp CEEEESSCBCCSSCSSBCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEES
T ss_pred EEEEEeecCCCCCCCCCCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEEC
Confidence 57899999996 8999999999999999986 78999999976 99999999999765
No 156
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.9e-13 Score=107.52 Aligned_cols=55 Identities=24% Similarity=0.444 Sum_probs=51.5
Q ss_pred EEEEEeeccCC-CCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVA-MEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~-~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.+ +.++||+|++||+|.|+...+++||.|+ .+|+.||||+|||+.+
T Consensus 8 ~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~ 65 (71)
T 2gqi_A 8 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 65 (71)
T ss_dssp CCEEESSCCCCCTTSSCCCCCTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEEC
T ss_pred CEEEECcccCCCCCCCCCCCCCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEEC
Confidence 46889999999 9999999999999999999999999998 6899999999999865
No 157
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=99.33 E-value=4.9e-13 Score=114.65 Aligned_cols=57 Identities=30% Similarity=0.468 Sum_probs=50.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe-cCC--CcccccCC--------Cccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT-LDR--DWWWGTRG--------EASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-~~~--~Ww~g~~~--------g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|+.+ .+. +||.|++. |+.||||+|||+.+.
T Consensus 22 ~~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~ 89 (108)
T 1i1j_A 22 ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ 89 (108)
T ss_dssp SEEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred eeEEEECCccCCCCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcc
Confidence 4679999999999999999999999999998 334 49999976 999999999998764
No 158
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=7.9e-13 Score=111.73 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=53.4
Q ss_pred eEEEEEeeccCCC--------CCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhcccccc
Q psy1488 178 VVLAEAVWDHVAM--------EAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLRVSQED 238 (630)
Q Consensus 178 ~~~~~aly~~~~~--------~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~~s~e~ 238 (630)
...|+|+|+|.++ .++||+|++||+|.|+.+. ++|||.|+++|+.||||++||+.+...+.
T Consensus 17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~ 86 (97)
T 2csq_A 17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDE 86 (97)
T ss_dssp CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEETTEEEEEETTTSEECCCCSC
T ss_pred ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEECCcEEEEehHHeEECCCCch
Confidence 4679999999999 7899999999999999764 47899999999999999999987754433
No 159
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=99.33 E-value=9.5e-13 Score=104.75 Aligned_cols=55 Identities=27% Similarity=0.560 Sum_probs=50.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|+|.++.++||+|++||+|.|++. +++||.|+. +|+.||||++||+.+.
T Consensus 8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~ 63 (72)
T 2jw4_A 8 VVVVAKFDYVAQQEQELDIKKNERLWLLDD-SKSWWRVRNSMNKTGFVPSNYVERKN 63 (72)
T ss_dssp EEEECSSCCCCSSTTSCCCCTTCEEEEEEC-SSSSEEEECTTSCEEEECTTSCEECC
T ss_pred eEEEECcCCCcCCCCcccCCCCCEEEEEEC-CCCEEEEEECCCCEEEEEhhHEEEcC
Confidence 579999999999999999999999999997 679999994 9999999999998764
No 160
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=99.33 E-value=4.9e-13 Score=105.88 Aligned_cols=56 Identities=29% Similarity=0.392 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+ .+|+.||||++||+.+.
T Consensus 8 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 65 (70)
T 2cuc_A 8 NMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVS 65 (70)
T ss_dssp CCEECCSCBCCCSTTBCCBCTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECC
T ss_pred cEEEECeeECcCCCCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECc
Confidence 468899999999999999999999999999889999999 79999999999998663
No 161
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.33 E-value=6.1e-13 Score=110.18 Aligned_cols=53 Identities=40% Similarity=0.642 Sum_probs=50.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-----CCCcccccC-CCccccccccchh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-----DRDWWWGTR-GEASGWFPSAFVR 231 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-----~~~Ww~g~~-~g~~G~~P~~~v~ 231 (630)
..++|+|||.++.++||+|++||+|.|+++. +++||.|+. +|+.||||++||+
T Consensus 30 ~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~ 88 (89)
T 2rf0_A 30 PVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVA 88 (89)
T ss_dssp CEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEE
T ss_pred cEEEECCccCCCCCCccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCc
Confidence 5789999999999999999999999999985 799999998 9999999999996
No 162
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=99.32 E-value=4.3e-13 Score=106.22 Aligned_cols=56 Identities=27% Similarity=0.459 Sum_probs=51.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCC--ccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGE--ASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g--~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+..+ +.||||.+||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 65 (70)
T 2ecz_A 8 GEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIS 65 (70)
T ss_dssp BCEEESSCCCCCSTTBCCCCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESS
T ss_pred CEEEECccCCCCCcCCcCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECC
Confidence 568999999999999999999999999999889999999765 99999999998764
No 163
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.32 E-value=1.1e-12 Score=106.69 Aligned_cols=58 Identities=29% Similarity=0.570 Sum_probs=52.6
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC-----Cccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG-----EASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~-----g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|++..+++||.|++. |+.||||.+||+.+..
T Consensus 7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~ 69 (80)
T 1ue9_A 7 GEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGP 69 (80)
T ss_dssp CEEEEECSCCCCCSTTBCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred CeEEEECcccCCCCCCCCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECCC
Confidence 357999999999999999999999999999988999999965 4999999999987643
No 164
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=99.32 E-value=6.7e-13 Score=108.05 Aligned_cols=56 Identities=27% Similarity=0.648 Sum_probs=52.3
Q ss_pred eEEEEEeeccCCCCCC-CCCCCCCCEEEEEEecCC-----CcccccC-CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAE-ELGFRAGDVIEVLDTLDR-----DWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~-eL~f~~gd~i~vl~~~~~-----~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
...|+|+|+|.++.++ ||+|++||+|.|+...+. +||.|+. +|+.||||++||+.+
T Consensus 14 ~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 76 (80)
T 2v1r_A 14 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 76 (80)
T ss_dssp CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred CEEEEECccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEc
Confidence 4689999999999999 999999999999999876 9999998 899999999999865
No 165
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=103.95 Aligned_cols=56 Identities=25% Similarity=0.487 Sum_probs=52.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+++||.|+. +|+.||||.+||+.+.
T Consensus 8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~ 65 (70)
T 2ct3_A 8 TPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVS 65 (70)
T ss_dssp EEEEESSCBCCSSTTBCCBCTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETT
T ss_pred cEEEECccCCcCCcCCccCCCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECC
Confidence 6799999999999999999999999999999999999996 4999999999998653
No 166
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=99.32 E-value=5.3e-13 Score=105.05 Aligned_cols=55 Identities=22% Similarity=0.451 Sum_probs=51.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.+..++||+|++||+|.|+...+++||.|+ .+|+.||||++||+.+
T Consensus 11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 66 (68)
T 1s1n_A 11 EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPY 66 (68)
T ss_dssp EEEEECSCBCCSSSSCCCBCSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEEC
T ss_pred CEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEEC
Confidence 578899999999999999999999999999889999999 7999999999999765
No 167
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=99.32 E-value=3e-13 Score=109.23 Aligned_cols=54 Identities=24% Similarity=0.500 Sum_probs=50.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhh
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRL 232 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~ 232 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+. +|+.||||+|||+.
T Consensus 21 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~ 75 (77)
T 1awj_A 21 TLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE 75 (77)
T ss_dssp SCCCCCCCBCCCCTTSCCBCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCC
T ss_pred eEEEECccCCCCCcCCcCCCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEE
Confidence 3578999999999999999999999999998899999994 99999999999974
No 168
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.32 E-value=1.6e-12 Score=110.16 Aligned_cols=58 Identities=34% Similarity=0.707 Sum_probs=53.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
...++|+|+|.++.++||+|++||+|.|++..+++||.|+.+|+.||||.+||+.+..
T Consensus 34 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 91 (98)
T 1udl_A 34 VCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTTD 91 (98)
T ss_dssp SEEEEESSCCCCSSTTSCCCCTTCEEEECBCCSSSEEBCBSSSCBCCEETTSEEECCC
T ss_pred ceEEEECCCCCCCCCCccCCcCCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEcCC
Confidence 3679999999999999999999999999999889999999999999999999987643
No 169
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=99.31 E-value=8.8e-13 Score=104.38 Aligned_cols=57 Identities=26% Similarity=0.578 Sum_probs=50.6
Q ss_pred ceEEEEEeeccCCCCCC--CCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhcc
Q psy1488 177 FVVLAEAVWDHVAMEAE--ELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 177 ~~~~~~aly~~~~~~~~--eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~ 234 (630)
....|+|+|+|.++.++ ||+|++||+|.|++. +++||.|+ .+|+.||||++||+.+.
T Consensus 4 ~~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~ 63 (70)
T 2vkn_A 4 FIYKAKALYPYDADDDDAYEISFEQNEILQVSDI-EGRWWKARRANGETGIIPSNYVQLID 63 (70)
T ss_dssp CEEEEEESSCBCCCSSSTTBCCBCTTCEEEEECT-TSSEEEEECTTSCEEEEEGGGEEEEE
T ss_pred cCEEEEECccCCCCCCCCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEehHHEEECC
Confidence 35789999999999765 999999999999986 78999996 69999999999998764
No 170
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=99.31 E-value=4.4e-13 Score=107.32 Aligned_cols=55 Identities=27% Similarity=0.645 Sum_probs=51.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
+.|+|+|+|.++.++||+|++||+|.|++.. +.+||.|+.+|+.||||++||+.+
T Consensus 10 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 65 (74)
T 1gbq_A 10 MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 65 (74)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEECCBCSSCSSEEEEEETTEEEEEEGGGEEEE
T ss_pred eEEEECccCCCCCCCeeeEcCCCEEEEeEecCCCCEEEEEECCCEEEEehHhEEEc
Confidence 5699999999999999999999999999987 578999999999999999999865
No 171
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.31 E-value=1.1e-12 Score=105.99 Aligned_cols=56 Identities=38% Similarity=0.642 Sum_probs=52.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC---Ccc------ccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG---EAS------GWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~---g~~------G~~P~~~v~~~~ 234 (630)
..++|+|||.+..++||+|++||+|.|++..+++||.|+.. |+. ||||++||+.+.
T Consensus 8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~ 72 (77)
T 2d8j_A 8 QYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDS 72 (77)
T ss_dssp EEEEESSCBCCSSSSBCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECC
T ss_pred CEEEEccCCCCCCCCccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcC
Confidence 57999999999999999999999999999989999999976 888 999999998653
No 172
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=99.30 E-value=4.3e-13 Score=114.95 Aligned_cols=56 Identities=21% Similarity=0.335 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCcc---ccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEAS---GWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~---G~~P~~~v~~~~ 234 (630)
.+|+|+|||.++.++||+|++||+|.|++..+++||.|+++|+. |+||+|||+.+.
T Consensus 6 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~~ 64 (108)
T 2rqv_A 6 LYAIVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIID 64 (108)
T ss_dssp CCEEESSCCCCCSSSBCCCCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBCCC
T ss_pred eEEEECCCcCCCCCCcCCcCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEEec
Confidence 56999999999999999999999999999989999999988777 999999998764
No 173
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=99.30 E-value=1.1e-12 Score=114.23 Aligned_cols=108 Identities=10% Similarity=0.154 Sum_probs=88.6
Q ss_pred cCCccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEecc-CCCceeEEEeEeecCcceeeeCCC-CCCCCCCcccceeE
Q psy1488 480 ETSSQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDI-LKRNTHVYKARLNIDTSQIINLPD-GKDPHLGVTVRHAI 557 (630)
Q Consensus 480 ~~~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~-~~~~~~~~k~~i~L~~~~v~~~~d-~~~~~~g~~~~~~f 557 (630)
...++|+.+|.+.......+.++||||||+++||+||++. .....|.||..|.|..+.|.+..+ ++ +..|
T Consensus 5 ~~~G~Ll~q~~f~V~~~~~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~~d--------~~kF 76 (119)
T 1fho_A 5 GKLGRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDED--------TIVL 76 (119)
T ss_dssp CCCCCSSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTTCC--------EEEE
T ss_pred HHcCCccccCceEEEeCCCCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCCCC--------CcEE
Confidence 3447889999998654335678999999999999999862 235679999999999999998766 43 4779
Q ss_pred EEEecCCCeEEEE--EeCCHH-HHHHHHHHHHHHHHHHhhc
Q psy1488 558 KIHCSDKDKWLLF--CCRSLE-DKARWLAAFQQERALVEQD 595 (630)
Q Consensus 558 ~I~~~~~~~~~~l--~a~s~~-ek~~W~~~L~~a~~~~~~~ 595 (630)
.||..+....|++ +|+|.+ .|+.|++.|++.++.+.+.
T Consensus 77 eiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~~~~ 117 (119)
T 1fho_A 77 QPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKYAAE 117 (119)
T ss_dssp ECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHHHCC
T ss_pred EEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 9998876778888 999999 9999999999988777654
No 174
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=99.30 E-value=1.4e-12 Score=109.10 Aligned_cols=58 Identities=26% Similarity=0.615 Sum_probs=53.2
Q ss_pred eEEEEEeeccCCCCCC-CCCCCCCCEEEEEEecCC-----CcccccC-CCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAE-ELGFRAGDVIEVLDTLDR-----DWWWGTR-GEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~-eL~f~~gd~i~vl~~~~~-----~Ww~g~~-~g~~G~~P~~~v~~~~s 235 (630)
..+|+|+|+|.++.++ ||+|++||+|.|+...+. +||.|+. +|+.||||.+||+.+..
T Consensus 14 ~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~~ 78 (92)
T 1jqq_A 14 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR 78 (92)
T ss_dssp CEEEEESSBBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECCC
T ss_pred CEEEEECccCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECCC
Confidence 4689999999999999 999999999999999876 9999997 89999999999987643
No 175
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=1.9e-12 Score=104.90 Aligned_cols=54 Identities=17% Similarity=0.310 Sum_probs=49.3
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..++|+|||.++.++||+|++||+|.|++ .+++||.|+. +|+.||||+|||+.+
T Consensus 18 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~-~~~~Ww~~~~~~~g~~G~~P~~yv~~~ 73 (79)
T 2cud_A 18 DFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARV 73 (79)
T ss_dssp CEEEESSCSSCTTTSCCSSCTTCEEEEEE-EETTEEEEEETTTCCEEEEEGGGEEEE
T ss_pred eEEEEccCCCCCCCCcCCCCCCCEEEEEe-cCCCeEEEEECCCCCEEEeeHHHeEEc
Confidence 47999999999999999999999999998 5789999984 599999999999765
No 176
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.29 E-value=8.7e-13 Score=105.06 Aligned_cols=54 Identities=35% Similarity=0.789 Sum_probs=50.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC---CCcc---ccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR---GEAS---GWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~---~g~~---G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.| +..+++||.|+. +|+. ||||+|||+.+
T Consensus 11 ~~~~alydy~~~~~~eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~ 70 (72)
T 2kgt_A 11 PKYVGLWDFKSRTDEELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAER 70 (72)
T ss_dssp CEEECCTTCBCSSTTSCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEE
T ss_pred cEEEEcccCCCCCcCCcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEc
Confidence 579999999999999999999999999 888899999997 7999 99999999764
No 177
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=1.3e-12 Score=102.74 Aligned_cols=55 Identities=27% Similarity=0.514 Sum_probs=50.3
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++.. ++||.|+ .+|+.||||++||+.+.
T Consensus 8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~ 63 (68)
T 1wxb_A 8 KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEAS 63 (68)
T ss_dssp CCEECSSCBCCSSSSBCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCC
T ss_pred EEEEECccCCCCCCCccCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECC
Confidence 4688999999999999999999999999884 8999998 59999999999998764
No 178
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=99.28 E-value=3.3e-13 Score=107.13 Aligned_cols=58 Identities=29% Similarity=0.637 Sum_probs=52.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccc-cccccchhhcccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASG-WFPSAFVRLRVSQ 236 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G-~~P~~~v~~~~s~ 236 (630)
..++|+|+|.++.++||+|++||+|.|+...+++||.|+++|+.| |||++||+.+...
T Consensus 7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~gG~~P~~yv~~~~~~ 65 (71)
T 1hsq_A 7 CAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNP 65 (71)
T ss_dssp SCCCCSSCCCCSSSSSCCCCTTCCCBSCCCBTTTEECCBCSSSCSCCEETTTCCSCSCC
T ss_pred eEEEECCCCCcCCCCccCCCCCCEEEEEEecCCCEEEEEECCeEEeEEChHHcEECCCc
Confidence 457899999999999999999999999999899999999999887 9999999876443
No 179
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=3.3e-12 Score=101.06 Aligned_cols=56 Identities=13% Similarity=0.354 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccCC-Cccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTRG-EASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~-g~~G~~P~~~v~~~~ 234 (630)
..++|+|+|.++.++||+|++||+|.|++..+ ++||.|+.. |+.||||.+||+.+.
T Consensus 8 ~~~~alydy~~~~~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~ 65 (70)
T 2ct4_A 8 GHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS 65 (70)
T ss_dssp CEEEESSCBCCCSTTCCCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECC
T ss_pred CEEEEcccCCCCCCCcCCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcC
Confidence 46999999999999999999999999999875 569999976 999999999998653
No 180
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=99.27 E-value=3.1e-12 Score=100.55 Aligned_cols=54 Identities=28% Similarity=0.479 Sum_probs=49.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..++|+|+|.++.++||+|++||+|.|++.. ++||.|+ .+|+.||||+|||+.+
T Consensus 9 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~ 63 (68)
T 2k2m_A 9 KWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPY 63 (68)
T ss_dssp CEEEESSCBCCCSSSBCCBCTTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEEC
T ss_pred EEEEECccCCCCCCCcccCCCCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEc
Confidence 5799999999999999999999999999985 8999996 5899999999999865
No 181
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=4.5e-12 Score=103.24 Aligned_cols=55 Identities=24% Similarity=0.483 Sum_probs=50.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCC-CcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDR-DWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~-~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..|+|+|||.++.++||+|++||+|.|++..++ +||.|+. +|+.||||+|||+..
T Consensus 18 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~ 75 (81)
T 1x6g_A 18 TQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRER 75 (81)
T ss_dssp CEEEESSCBSSCCTTCCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred CEEEECCCCCcCCCCCCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEc
Confidence 468899999999999999999999999998776 9999984 799999999999754
No 182
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=3.4e-12 Score=107.26 Aligned_cols=57 Identities=19% Similarity=0.373 Sum_probs=52.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--C--CCccccc--CCCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--D--RDWWWGT--RGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~--~~Ww~g~--~~g~~G~~P~~~v~~~~s 235 (630)
..|+|+|+|.++.++||+|++||+|.|+... + ++||.|+ .+|+.||||.|||+.+..
T Consensus 17 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~ 79 (94)
T 2e5k_A 17 ETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADE 79 (94)
T ss_dssp EEEEECSCBCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCS
T ss_pred eEEEECCcCCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEccc
Confidence 6799999999999999999999999999883 4 8999999 899999999999987643
No 183
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=4.4e-12 Score=104.40 Aligned_cols=55 Identities=24% Similarity=0.532 Sum_probs=51.5
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..|+|+|+|.++.++||+|++||+|.|++..+++||.|+ .+|+.||||++||+.+
T Consensus 20 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~ 75 (85)
T 2yuq_A 20 TVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEK 75 (85)
T ss_dssp CEEEESSCCCCSCSSBCCCCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEEC
T ss_pred eEEEECcCCCCCCCCcCCCCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEc
Confidence 568999999999999999999999999999989999996 6999999999999865
No 184
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.25 E-value=7.1e-11 Score=113.10 Aligned_cols=57 Identities=32% Similarity=0.590 Sum_probs=52.0
Q ss_pred ceEEEEEeeccCCCCCCCCCCCCCCEEEEEE-----ecCCCcccccC----------CCccccccccchhhc
Q psy1488 177 FVVLAEAVWDHVAMEAEELGFRAGDVIEVLD-----TLDRDWWWGTR----------GEASGWFPSAFVRLR 233 (630)
Q Consensus 177 ~~~~~~aly~~~~~~~~eL~f~~gd~i~vl~-----~~~~~Ww~g~~----------~g~~G~~P~~~v~~~ 233 (630)
...+|+|||+|.++..+||+|++||+|.|+. ..++|||.|+. +|+.||||.|||+.+
T Consensus 141 ~~~~~rALYdY~a~~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l 212 (213)
T 1mv3_A 141 FMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV 212 (213)
T ss_dssp CCEEEEESSCBCCCSTTCCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred cceEEEECCCcCCCCCCcCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence 4568999999999999999999999999999 67899999995 599999999999764
No 185
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=99.25 E-value=2.3e-12 Score=112.07 Aligned_cols=56 Identities=30% Similarity=0.558 Sum_probs=50.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEE-----ecCCCcccccC----------CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLD-----TLDRDWWWGTR----------GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~-----~~~~~Ww~g~~----------~g~~G~~P~~~v~~~ 233 (630)
..+|+|+|+|.++.++||+|++||+|.|+. ..+++||.|+. +|+.||||+|||+.+
T Consensus 44 ~~~~~Alydy~a~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l 114 (115)
T 1bb9_A 44 MFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV 114 (115)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred ceEEEECCccCCCCCCccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence 467999999999999999999999999999 67899999964 489999999999864
No 186
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=99.24 E-value=2.9e-12 Score=107.41 Aligned_cols=58 Identities=31% Similarity=0.577 Sum_probs=52.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecC----CCcccccCCCc-cccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD----RDWWWGTRGEA-SGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~----~~Ww~g~~~g~-~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|+...+ .+||.|+++|+ .||||.+||+.+..
T Consensus 17 ~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~ 79 (93)
T 1wxu_A 17 HVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGK 79 (93)
T ss_dssp BBCEEESSCBCCSSSSBCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECCC
T ss_pred CEEEEECccCCCCCCCccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCC
Confidence 467999999999999999999999999999877 59999998887 99999999987643
No 187
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=99.24 E-value=2.1e-12 Score=107.43 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=49.0
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe-------------cC--CCcccccC--CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT-------------LD--RDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-------------~~--~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
...|+|+|+|.++.++||+|++||+|.|+.. .+ .+||.|+. +|+.||||+|||+.+
T Consensus 11 ~~~~~Alydy~a~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i 83 (90)
T 3o5z_A 11 GFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFL 83 (90)
T ss_dssp EEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEE
T ss_pred CcEEEEeeeECCCCCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEe
Confidence 4679999999999999999999999999843 22 38999975 799999999999866
No 188
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=99.23 E-value=2.4e-12 Score=103.11 Aligned_cols=55 Identities=27% Similarity=0.601 Sum_probs=50.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC---CCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR---GEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~---~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|+|.++.++||+|++||+|.|++.. ++||.|+. +|+.||||++||+.+.
T Consensus 12 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~~~ 69 (74)
T 2m0y_A 12 KYGVAFYNYDARGADELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHLKE 69 (74)
T ss_dssp SCEEECSEECCCSSSBCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEECC
T ss_pred eEEEEceeeCCCCcCcccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEEec
Confidence 4688999999999999999999999999985 88999986 7999999999998653
No 189
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=99.22 E-value=6.3e-12 Score=110.35 Aligned_cols=56 Identities=21% Similarity=0.482 Sum_probs=51.9
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc---CCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT---RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~---~~g~~G~~P~~~v~~~~ 234 (630)
.+|+|+|||.++.++||+|++||+|.|+...+++||.|+ ..|+.||||+|||+.+.
T Consensus 4 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~ 62 (120)
T 2kym_A 4 LFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIID 62 (120)
T ss_dssp CEEEECSCBCCCSTTCCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEEC
T ss_pred EEEEEcccCCCCCCCccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEcc
Confidence 579999999999999999999999999999999999997 47899999999998763
No 190
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=99.22 E-value=4.7e-12 Score=105.49 Aligned_cols=56 Identities=29% Similarity=0.642 Sum_probs=51.1
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~s 235 (630)
..|+|+|||.++.++||+|++||+|.|++. +++||.|+. +|+.||||++||+.+..
T Consensus 4 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 61 (90)
T 3reb_B 4 IIVVALYDYVSWSPDDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDS 61 (90)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred EEEEECCccCcCCcCcCCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEehhheEECCC
Confidence 468999999999999999999999999998 578999996 89999999999987643
No 191
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=99.21 E-value=2.3e-12 Score=105.62 Aligned_cols=57 Identities=21% Similarity=0.334 Sum_probs=49.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe---------------cCCCccccc--CCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT---------------LDRDWWWGT--RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~---------------~~~~Ww~g~--~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.++.++||+|++||+|.|+.. .+.+||.|+ .+|+.||||.|||+.+.
T Consensus 5 ~~~~~Alydy~~~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~ 78 (83)
T 3i5r_A 5 GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG 78 (83)
T ss_dssp EEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred CcEEEEccccCCCCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECC
Confidence 3679999999999999999999999999954 234899994 57999999999998663
No 192
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=99.21 E-value=2e-11 Score=105.60 Aligned_cols=57 Identities=28% Similarity=0.596 Sum_probs=52.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~ 234 (630)
...++|+|||.+..++||+|++||+|.|++..+++||.|+. +|+.||||.+||+.+.
T Consensus 27 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 85 (109)
T 2yt6_A 27 VTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD 85 (109)
T ss_dssp CCEEEESSCCCCSSTTSCCCCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred CEEEEECccCCCCCCCccCCCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECC
Confidence 36799999999999999999999999999999999999984 8999999999998763
No 193
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=99.18 E-value=5.8e-11 Score=112.45 Aligned_cols=120 Identities=19% Similarity=0.414 Sum_probs=80.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC---CCccccccccchhhccccccchhhhhhhhhcCCCccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR---GEASGWFPSAFVRLRVSQEDTVEDCLAALASGGSKTL 255 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~---~g~~G~~P~~~v~~~~s~e~~~e~~l~~~~~~~~~~l 255 (630)
.+|+|+|+|.++.++||+|++||+|.|++..+ +||.|++ +|+.||||+|||+.+....... +...
T Consensus 18 ~~~~Alydf~~~~~~eLs~~~Gd~i~v~~~~~-~W~~g~~~~~~g~~G~fP~nyV~~~~~~~~~~---------~~~e-- 85 (184)
T 3a98_A 18 RHGVAIYNFQGSGAPQLSLQIGDVVRIQETCG-DWYRGYLIKHKMLQGIFPKSFIHIKEVTVEKR---------RNTE-- 85 (184)
T ss_dssp CEEEESSCBCCSSTTBCCBCTTCEEEEEEEET-TEEEEEETTEEEEEEEEEGGGEEEECC--------------------
T ss_pred eEEEEeeeeCCCCCCCCCcCCCCEEEEEecCC-CEEEEEEecCCCceEEECcceEEEeccccccc---------Cccc--
Confidence 57999999999999999999999999999876 5999997 7899999999998764322110 0000
Q ss_pred ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHH
Q psy1488 256 RRRTSISLLSNDQVRSRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLE 330 (630)
Q Consensus 256 ~~~~~~~l~~~~~kR~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~ 330 (630)
... . .-..++.|+..+-+.+...+..+ |.. .. ...+..|..-+.+|+..+..++.
T Consensus 86 ---~~~---~---~~~plv~Ei~~~lrew~~~~~~l---y~~-----~~---~~~f~~l~~~~~eL~~~R~qlls 140 (184)
T 3a98_A 86 ---NII---P---AEIPLAQEVTTTLWEWGSIWKQL---YVA-----SK---KERFLQVQSMMYDLMEWRSQLLS 140 (184)
T ss_dssp -----C---C---THHHHHHHHHHHHHHHHHHHHHH---HHT-----TC---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccc---c---ccccHHHHHHHHHHHHHHHHHHH---Hhh-----hh---hHHHHHHHHHHHHHHHHHHHHhc
Confidence 000 0 12447888888888777755433 211 00 13344555555677777776654
No 194
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=99.12 E-value=3.1e-11 Score=95.42 Aligned_cols=45 Identities=29% Similarity=0.652 Sum_probs=39.2
Q ss_pred CCCCCCCCCCCCCEEEEEEe-cCCCcccc--cCCCccccccccchhhc
Q psy1488 189 AMEAEELGFRAGDVIEVLDT-LDRDWWWG--TRGEASGWFPSAFVRLR 233 (630)
Q Consensus 189 ~~~~~eL~f~~gd~i~vl~~-~~~~Ww~g--~~~g~~G~~P~~~v~~~ 233 (630)
++..+||+|++||+|.|++. .+++||.| ..+|+.||||+|||+..
T Consensus 21 ~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~ 68 (70)
T 1gcq_C 21 GAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY 68 (70)
T ss_dssp GGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred CCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEEC
Confidence 33445999999999999999 67899999 67999999999999754
No 195
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=99.12 E-value=3e-11 Score=97.65 Aligned_cols=55 Identities=22% Similarity=0.505 Sum_probs=46.0
Q ss_pred EEEEEeeccCCCC---CCCCCCCCCCEEEEEEec-CCCccccc--CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAME---AEELGFRAGDVIEVLDTL-DRDWWWGT--RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~---~~eL~f~~gd~i~vl~~~-~~~Ww~g~--~~g~~G~~P~~~v~~~ 233 (630)
..+.++|+|.++. ++||+|++||+|.|++.. +++||.|+ .+|+.||||+|||+..
T Consensus 16 ~~~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~ 76 (78)
T 1k1z_A 16 EVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY 76 (78)
T ss_dssp EECSCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEES
T ss_pred EEEEECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence 3445666776643 599999999999999995 89999999 6899999999999754
No 196
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=99.09 E-value=3.8e-11 Score=112.98 Aligned_cols=55 Identities=20% Similarity=0.566 Sum_probs=51.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRL 232 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~ 232 (630)
...++|+|||.++.++||+|++||+|.|+++.+++||.|+ .+|+.||||+|||++
T Consensus 118 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~ 173 (174)
T 3qwx_X 118 IEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173 (174)
T ss_dssp SEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred ccEEEEecCcccCCCCccccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence 3679999999999999999999999999999999999999 699999999999974
No 197
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=99.05 E-value=7.9e-11 Score=114.98 Aligned_cols=57 Identities=37% Similarity=0.691 Sum_probs=53.5
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|||.++.++||+|++||+|.|+...+++||.|+++|+.||||+|||+.+.
T Consensus 158 ~~~~~al~~y~~~~~~eL~~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 214 (217)
T 1gri_A 158 PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVN 214 (217)
T ss_dssp CCEEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEEEC
T ss_pred ceEEEecCCccCCCCCcCCCCCCCEEEEEEeCCCCeEEEEECCeEEEEeHHHeEECC
Confidence 367999999999999999999999999999999999999999999999999998763
No 198
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=99.03 E-value=1.4e-10 Score=110.91 Aligned_cols=58 Identities=26% Similarity=0.581 Sum_probs=53.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.+..++||+|++||+|.|+...++|||.|+.+|+.||||.+||+.+..
T Consensus 11 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 68 (193)
T 1ng2_A 11 LQTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDS 68 (193)
T ss_dssp CEEEECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCSSC
T ss_pred CcEEEEcCCcCCCCCCcCCCCCCCEEEEEEecCCCeEEEEECCeeeEechheEEeecc
Confidence 3679999999999999999999999999999899999999999999999999987644
No 199
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=99.01 E-value=1.2e-10 Score=111.37 Aligned_cols=57 Identities=25% Similarity=0.517 Sum_probs=53.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
..+.|+|+|.+..++||+|++||+|.|+...++|||.|+++|+.||||++||+.+..
T Consensus 82 ~~~~al~dy~a~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 138 (193)
T 1ng2_A 82 EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQ 138 (193)
T ss_dssp EEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred eeeeeccccCCCCCCcccccCCCEEEEEEecCCCeEEEEECCCEEEEehHHeEECCC
Confidence 568899999999999999999999999999899999999999999999999987644
No 200
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=99.00 E-value=1.2e-10 Score=119.53 Aligned_cols=59 Identities=25% Similarity=0.399 Sum_probs=53.9
Q ss_pred eEEEEEeeccC--CCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHV--AMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~--~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s~ 236 (630)
..+|+|+|+|. +..++||+|++||+|.|+.+.++|||.|+++|+.||||+|||+.+...
T Consensus 237 ~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~ 297 (304)
T 2eyz_A 237 PIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQQ 297 (304)
T ss_dssp CCCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEEEEETTEEEECCCTTSCCCSSC
T ss_pred CEEEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEEEEECCceEEechHHEEECCCC
Confidence 35688999999 779999999999999999999999999999999999999999977543
No 201
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=98.97 E-value=7.9e-11 Score=115.86 Aligned_cols=60 Identities=22% Similarity=0.515 Sum_probs=54.8
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhccccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRVSQE 237 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~s~e 237 (630)
...|+|+|||.++.++||+|++||+|.|+++.+++||.|+ .+|+.||||+|||+.+....
T Consensus 136 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~ 196 (230)
T 2dvj_A 136 AEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPAS 196 (230)
T ss_dssp CCCCBCCSCCCCSSSSSCCCCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCSSC
T ss_pred ceeEEEeeeecCCCCCCccCcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCCCC
Confidence 3568899999999999999999999999999999999998 89999999999999875543
No 202
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=98.97 E-value=2.9e-10 Score=86.80 Aligned_cols=54 Identities=24% Similarity=0.458 Sum_probs=48.2
Q ss_pred EEEEeecc--CCCCCCCCCCCCCCEEEEEEecCCCcccccCC------Cccccccccchhhc
Q psy1488 180 LAEAVWDH--VAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG------EASGWFPSAFVRLR 233 (630)
Q Consensus 180 ~~~aly~~--~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~------g~~G~~P~~~v~~~ 233 (630)
..+|++|| ...+.+|++|+.||+|.|+++.++|||.++.. +++||+|++|++..
T Consensus 7 ~Y~v~aDy~p~~~~~~ei~lk~Gd~VeVl~k~~~gwW~vr~~~~~~~~~~eGWVPa~yLe~~ 68 (71)
T 1v1c_A 7 IYVVTADYLPLGAEQDAITLREGQYVEVLDAAHPLRWLVRTKPTKSSPSRQGWVSPAYLDRR 68 (71)
T ss_dssp EEEESSCBCCCSCCTTBCCBCTTCEEEEEEEEETTEEEEEECCCTTCCCCEEEECGGGEEEE
T ss_pred EEEEEecccccCCCcceeeecCCCEEEEEEcCCCCEEEEEecCCCCCCCccceecHHHhhhh
Confidence 46788999 56788899999999999999999999999976 99999999999753
No 203
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=98.96 E-value=2.4e-10 Score=88.14 Aligned_cols=44 Identities=25% Similarity=0.687 Sum_probs=41.0
Q ss_pred CCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 191 EAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 191 ~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
+++||+|++||+|.|++..+++||.|+.+|+.||||++||+.+.
T Consensus 2 ~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 45 (63)
T 1tuc_A 2 GPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 45 (63)
T ss_dssp CCCCCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECS
T ss_pred CccccCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEcC
Confidence 57899999999999999999999999999999999999998763
No 204
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=98.94 E-value=3.5e-10 Score=106.46 Aligned_cols=55 Identities=24% Similarity=0.512 Sum_probs=50.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++. +++||.|+. +|+.||||+|||+...
T Consensus 13 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~ 69 (175)
T 4d8k_A 13 NLVIALHSYEPSHDGDLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKAN 69 (175)
T ss_dssp CEEEESSCBCCCSSSBCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred cEEEEccCcCCcCCcccccccCCEEEEEcc-CCCEEEEEECCCCceeeeccccccccc
Confidence 479999999999999999999999999998 789999996 8999999999998653
No 205
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=98.92 E-value=2.8e-10 Score=91.64 Aligned_cols=47 Identities=30% Similarity=0.706 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 189 AMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 189 ~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
++.++||+|++||+|.|+.+.+++||.|+.+|+.||||++||+.+..
T Consensus 2 a~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 48 (77)
T 2jmc_A 2 AMGPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDS 48 (77)
T ss_dssp CSSSCCCCCCTTCEEECCCCCCSSCCCEEETTEEECCCGGGEEECCC
T ss_pred CcCCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEEEeeEEEEcCC
Confidence 56789999999999999999899999999999999999999987643
No 206
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=98.92 E-value=4e-10 Score=117.55 Aligned_cols=58 Identities=40% Similarity=0.647 Sum_probs=54.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|++..++|||.|+.+|+.||||+|||+.+..
T Consensus 174 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 231 (341)
T 2dyb_A 174 APRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKD 231 (341)
T ss_dssp CCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred CcEEEEEEeeCCCCCCcCCccCCCEEEEEEecCCCEEEEEECCcEEEechHHeEEcCC
Confidence 3579999999999999999999999999999999999999999999999999987643
No 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=98.91 E-value=3.5e-10 Score=125.62 Aligned_cols=55 Identities=22% Similarity=0.590 Sum_probs=51.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..|+|+|||.++.++||+|++||+|.|++..+++||.|+. +|+.||||+|||+..
T Consensus 86 ~~~~alyd~~~~~~~el~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~ 142 (535)
T 2h8h_A 86 TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 142 (535)
T ss_dssp -CEEESSCBCCCSSSBCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEET
T ss_pred cEEEEccccCCcCCCcCCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhccc
Confidence 4699999999999999999999999999999999999997 899999999999864
No 208
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=98.43 E-value=1.5e-10 Score=118.70 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=52.3
Q ss_pred eEEEEEeeccCCCC--CCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAME--AEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~--~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~s 235 (630)
..+|+|+|+|.++. ++||+|++||+|.|+.+.++|||.|+++|+.||||+|||+.+..
T Consensus 237 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 296 (303)
T 2lqn_A 237 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP 296 (303)
Confidence 46799999998554 77999999999999999999999999999999999999987743
No 209
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=98.86 E-value=7.7e-10 Score=107.89 Aligned_cols=55 Identities=27% Similarity=0.645 Sum_probs=46.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
+.|+|+|+|.++.++||+|++||+|.|++.. +++||.|+.+|+.||||.|||+..
T Consensus 1 m~~~al~~~~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~ 56 (217)
T 1gri_A 1 MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 56 (217)
T ss_dssp CEEEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGGGEECC
T ss_pred CEEEEeeccCCcCCCcCCCCCCCEEEEEeccCCCCeEeeccCCccceECCcccccc
Confidence 3589999999999999999999999999886 678999999999999999999854
No 210
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=98.84 E-value=1.1e-09 Score=86.97 Aligned_cols=52 Identities=23% Similarity=0.385 Sum_probs=46.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec--CCCcccccC----CCccccccccch
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL--DRDWWWGTR----GEASGWFPSAFV 230 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~--~~~Ww~g~~----~g~~G~~P~~~v 230 (630)
-.+.|+|||.|...+||+|++||.+.|++.. +++||.++. .+++|++|+|||
T Consensus 18 e~~valydF~Ar~~~ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl 75 (82)
T 1u3o_A 18 ELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL 75 (82)
T ss_dssp EEEECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred eEEEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence 3478999999999999999999999999986 489999984 347899999999
No 211
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=98.82 E-value=1.6e-09 Score=111.04 Aligned_cols=58 Identities=22% Similarity=0.533 Sum_probs=53.6
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRVS 235 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~s 235 (630)
...|+|+|+|.++.++||+|++||+|.|+++.+++||.|+ .+|+.||||++||+.+..
T Consensus 134 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~ 192 (304)
T 2eyz_A 134 AEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRP 192 (304)
T ss_dssp CCEEEECSCCCCSCSSSCCCCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECCC
T ss_pred ceeEEEEeeecCCCCCcCcccCCCEEEEEEecCCCcEEEEeCCCceeccchhccccccC
Confidence 3579999999999999999999999999999999999999 799999999999987643
No 212
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=98.82 E-value=4e-10 Score=115.87 Aligned_cols=57 Identities=16% Similarity=0.334 Sum_probs=0.0
Q ss_pred eEEEEEeeccCC--CCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVA--MEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~--~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...|+|+|+|.+ ..++||+|++||+|.|+...+++||.|+++|+.||||.|||+++.
T Consensus 247 ~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~g~~~g~~G~fP~~yv~~~~ 305 (308)
T 3qwy_A 247 PAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAELDGQIGSVPHTYLRFTA 305 (308)
T ss_dssp -----------------------------------------------------------
T ss_pred ccccccccccccccCCcccceeCCCCEEEEEEEcCCCcEEEEECCeeEEechHHeEEec
Confidence 357899999954 556999999999999999988999999999999999999999774
No 213
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=98.82 E-value=1.5e-09 Score=118.37 Aligned_cols=59 Identities=24% Similarity=0.333 Sum_probs=54.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~~s~ 236 (630)
...++|+|+|.+++++||+|++||+|.|++..++|||.|+ .+|+.|+||+|||+.+.+.
T Consensus 442 ~~~~~aly~y~a~~~dELs~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~~~ 502 (526)
T 2de0_X 442 AHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIET 502 (526)
T ss_dssp CCEEEECSCBCCSSTTBCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECCCE
T ss_pred ccceEEeecCCCCCCCcCCcCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEcccC
Confidence 3578999999999999999999999999999999999999 7999999999999876544
No 214
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=98.78 E-value=2.8e-09 Score=109.55 Aligned_cols=56 Identities=20% Similarity=0.570 Sum_probs=52.3
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
...|+|+|||.++.++||+|++||+|.|++..+++||.|+. +|+.||||++||++.
T Consensus 147 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 203 (308)
T 3qwy_A 147 IEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ 203 (308)
T ss_dssp CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred ceeEEEeceEcCCCCCcCcCCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccccc
Confidence 36799999999999999999999999999999999999995 999999999999854
No 215
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=98.22 E-value=9.8e-10 Score=112.63 Aligned_cols=59 Identities=20% Similarity=0.577 Sum_probs=54.1
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhcccc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLRVSQ 236 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~~s~ 236 (630)
...|+|+|||.++.++||+|++||+|.|+++.+++||.|+ .+|+.||||++||+.+...
T Consensus 125 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~~ 184 (303)
T 2lqn_A 125 LEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRS 184 (303)
Confidence 4679999999999999999999999999999999999999 5899999999999876543
No 216
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=98.72 E-value=3.7e-09 Score=114.79 Aligned_cols=55 Identities=22% Similarity=0.590 Sum_probs=51.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
..++|+|||.++.++||+|++||+|.|++..+++||.|+. +|+.||||+|||+..
T Consensus 3 ~~~~al~~~~~~~~~el~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~ 59 (452)
T 1fmk_A 3 TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59 (452)
T ss_dssp EEEEESSCBCCCSSSBCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEET
T ss_pred eEEEECCccCCCCCCCCCccCCCEEEEeccCCCCceEEEEcCCCcccccCccccccc
Confidence 4689999999999999999999999999999999999997 899999999999764
No 217
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=98.71 E-value=7.4e-09 Score=79.45 Aligned_cols=41 Identities=24% Similarity=0.580 Sum_probs=38.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCC
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRG 219 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~ 219 (630)
..|+|+|||.++.++||+|++||+|.|+++.+++||.|+++
T Consensus 22 ~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~n 62 (62)
T 1g2b_A 22 ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVN 62 (62)
T ss_dssp CEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEEC
T ss_pred eEEEEeeeECCCCCCccCCCCCCEEEEEEecCCCEEEEEeC
Confidence 57999999999999999999999999999999999999753
No 218
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=98.70 E-value=6e-09 Score=113.05 Aligned_cols=56 Identities=21% Similarity=0.449 Sum_probs=51.2
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEe-cCCCcccccCC-Cccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDT-LDRDWWWGTRG-EASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~-~~~~Ww~g~~~-g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++. .+++||+|+.. |+.|+||+|||+...
T Consensus 12 ~~~~aly~~~~~~~~el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~ 69 (450)
T 1k9a_A 12 TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69 (450)
T ss_dssp CEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECC
T ss_pred CEEEECCCcCccCCCcCCCCCCCEEEEeeccCCCCceEEEECCCceeeechhcccccc
Confidence 468999999999999999999999999998 57899999976 999999999998653
No 219
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.66 E-value=1e-08 Score=112.65 Aligned_cols=56 Identities=25% Similarity=0.467 Sum_probs=51.8
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEec-CCCcccccCCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTL-DRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~-~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
..++|+|||.++.++||+|++||+|.|++.. +++||.|+..|..|+||+|||+...
T Consensus 44 ~~~~alyd~~~~~~~els~~~gd~~~v~~~~~~~~w~~~~~~~~~G~~P~~yv~~~~ 100 (495)
T 1opk_A 44 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN 100 (495)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred cEEEEeCCcCCCCCCCCCccCCCEEEEeecCCCCCceeeeecCCcceeccccccccc
Confidence 4689999999999999999999999999987 7899999999999999999998653
No 220
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=98.65 E-value=3e-09 Score=116.23 Aligned_cols=56 Identities=29% Similarity=0.536 Sum_probs=0.0
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecC-CCcccccCC-Cccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD-RDWWWGTRG-EASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~-~~Ww~g~~~-g~~G~~P~~~v~~~ 233 (630)
.+.|+|+|||.++.++||+|++||+|.|+...+ +|||.|++. |+.||||+|||+.+
T Consensus 428 ~~~~~alydy~~~~~~eLsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i 485 (486)
T 3haj_A 428 EVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI 485 (486)
T ss_dssp ----------------------------------------------------------
T ss_pred CeEEEEccccCCCCCCcCccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence 357999999999999999999999999999874 599999987 99999999999864
No 221
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=98.64 E-value=1.6e-05 Score=75.83 Aligned_cols=172 Identities=19% Similarity=0.338 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCCCCcCcHHHHH
Q psy1488 271 SRVVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETKLDWDAPYKSCIGETF 350 (630)
Q Consensus 271 ~~ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~~~~~~~~~~~ig~vf 350 (630)
..++..|++.|.+||.-|..+.+ |-.-|. ...++.++.+..+|..|.-|+..|+.|+..|.+... ...+|.-+
T Consensus 189 kslvesliqdecnyvgvltslse-fseimt-kkqilgpdvlkelfdhipvliqhhqkfisslqeaka-----dekvgekl 261 (518)
T 4gou_A 189 KSLVESLIQDECNYVGVLTSLSE-FSEIMT-KKQILGPDVLKELFDHIPVLIQHHQKFISSLQEAKA-----DEKVGEKL 261 (518)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HTTCSCHHHHHHHHTTHHHHHHHHHHHHHHHTSTTG-----GGSHHHHH
T ss_pred HHHHHHHHHhhccceeehhhHHH-HHHHHH-hhhccChHHHHHHHhhchHHHHHHHHHHHHHHHhhh-----hHHHHHhh
Confidence 56889999999999999988766 444443 367899999999999999999999999999987643 34589888
Q ss_pred HHhcCCcccHHHHhhChHHHHHHHHHHHhCCc------------hHHHHHHHHhhccCCCCCccccchhhhhhhhccHHH
Q psy1488 351 LKHKSGFRMYSEYCNSHPMAIATLQELYQHNN------------YSKFFEACRLMRGLIEIPLDGYLLTPVQRICKYPLQ 418 (630)
Q Consensus 351 ~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~------------f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LL 418 (630)
..-..++-+|.-|+.+.|..+..+...-...+ ...|-+.... .+.+++-.+|.-|.-|+.-|+-.
T Consensus 262 nsglhflvlyryylrhvpkniaklcsigmtdeievgrelyplpvieefdkqqkm---tkkmsvlqmlvypyfrvrtyqay 338 (518)
T 4gou_A 262 NSGLHFLVLYRYYLRHVPKNIAKLCSIGMTDEIEVGRELYPLPVIEEFDKQQKM---TKKMSVLQMLVYPYFRVRTYQAY 338 (518)
T ss_dssp HHHTGGGGGGHHHHTTTTHHHHHHHHHHTSCGGGTTTTTCSHHHHHHHHHHHHH---HTSCCHHHHHHGGGGHHHHHHHH
T ss_pred ccCceehHHHHHHHHhccHHHHHHccCCCcchhhccccccCcchHHHHHHHHHH---HHHHHHHHHHhhhhheehhHHHH
Confidence 87778888999999999998888766543322 2333333222 23578889999999999999999
Q ss_pred HHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy1488 419 LAELLKYTKTDHPDYVKITEALEAMRDVAMLINE 452 (630)
Q Consensus 419 L~~Llk~t~~~~~d~~~L~~A~~~i~~l~~~vne 452 (630)
..+.+|.|..++.+-..|+-....+.-+.+.+|.
T Consensus 339 vddfikitkkdsqevkelevvhsqlaifqelint 372 (518)
T 4gou_A 339 VDDFIKITKKDSQEVKELEVVHSQLAIFQELINT 372 (518)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988887777666655544444544
No 222
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=98.62 E-value=4.6e-09 Score=106.93 Aligned_cols=55 Identities=33% Similarity=0.570 Sum_probs=49.3
Q ss_pred EEEEEeeccCCCCCC-----CCCCCCCCEEEEEEecCCCcccccCC------Cccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAE-----ELGFRAGDVIEVLDTLDRDWWWGTRG------EASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~-----eL~f~~gd~i~vl~~~~~~Ww~g~~~------g~~G~~P~~~v~~~ 233 (630)
++++|+|||.++.++ ||+|++||++.|++..+++||.|+.. |+.|+||+||+...
T Consensus 2 ~~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~ 67 (295)
T 1kjw_A 2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER 67 (295)
T ss_dssp EEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred EEEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence 578999999999887 99999999999999999999999854 38899999999654
No 223
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=98.62 E-value=1.6e-08 Score=109.84 Aligned_cols=55 Identities=29% Similarity=0.634 Sum_probs=50.4
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc--CCCccccccccchhhcc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT--RGEASGWFPSAFVRLRV 234 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~--~~g~~G~~P~~~v~~~~ 234 (630)
..|+|+|||.++.++||+|++||+|.|++. +++||.|+ .+|+.|+||+|||+.+.
T Consensus 9 ~~~~al~~~~~~~~~el~~~~gd~~~v~~~-~~~W~~~~~~~~g~~G~~P~~yv~~~~ 65 (454)
T 1qcf_A 9 IIVVALYDYEAIHHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVD 65 (454)
T ss_dssp CEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred eEEEECcccCCcCCCcCcccCCCEEEEEec-CCCCeEEEECCCCceEEecchhccccc
Confidence 468999999999999999999999999988 58899999 79999999999997653
No 224
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=98.44 E-value=5.3e-08 Score=109.44 Aligned_cols=65 Identities=23% Similarity=0.302 Sum_probs=53.1
Q ss_pred eEEEEEeeccC---CCCCCCCCCCCCCEEEEEEe-----cCCCccccc--CCCccccccccchhhccccccchhh
Q psy1488 178 VVLAEAVWDHV---AMEAEELGFRAGDVIEVLDT-----LDRDWWWGT--RGEASGWFPSAFVRLRVSQEDTVED 242 (630)
Q Consensus 178 ~~~~~aly~~~---~~~~~eL~f~~gd~i~vl~~-----~~~~Ww~g~--~~g~~G~~P~~~v~~~~s~e~~~e~ 242 (630)
..+|.|+|||. +.++++|+|++||+|.|+.. .++|||.|+ .+|+.|+||.+||..++.-..+..+
T Consensus 573 s~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl~~p~~~ 647 (655)
T 3pvl_A 573 SKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTVTLPPRE 647 (655)
T ss_dssp CCEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCSSCCCHH
T ss_pred chhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCCCCCcHH
Confidence 36899999999 67889999999999999988 468999999 7899999999999988655444433
No 225
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.40 E-value=2.6e-06 Score=78.90 Aligned_cols=106 Identities=10% Similarity=0.142 Sum_probs=77.5
Q ss_pred ccEEEeeeEEEEecCcc------eeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCccccee
Q psy1488 483 SQLIHQGEVIRVTSGMW------TNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHA 556 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~~------~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~ 556 (630)
...|.+|.|++...+++ .+.|+++|-++.|.+-+.+. .....++.|+|..+..+...+...........++
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~---~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~ 89 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRA---EKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYP 89 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCS---SSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSE
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccC---cccccccEEEEeeeEEEEeccccccCccccccee
Confidence 46789999987654322 56899999999999987532 2223467889988876654444433344455788
Q ss_pred EEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 557 IKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 557 f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
|.|... ++.|.|+|.|++|++.|+++|+++++...
T Consensus 90 f~i~t~--~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~ 124 (164)
T 2lul_A 90 FQVVHD--ANTLYIFAPSPQSRDLWVKKLKEEIKNNN 124 (164)
T ss_dssp EEEECS--SCEEEEECSSHHHHHHHHHHHHHHHTTCS
T ss_pred EEEecC--CcEEEEECCCHHHHHHHHHHHHHHHHHCh
Confidence 998764 46788999999999999999999987543
No 226
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=98.34 E-value=2.2e-07 Score=94.57 Aligned_cols=53 Identities=25% Similarity=0.539 Sum_probs=47.7
Q ss_pred eEEEEEeeccCCCCCCC-------CCCCCCCEEEEEEecCCCcccccC---CCccccccccch
Q psy1488 178 VVLAEAVWDHVAMEAEE-------LGFRAGDVIEVLDTLDRDWWWGTR---GEASGWFPSAFV 230 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~e-------L~f~~gd~i~vl~~~~~~Ww~g~~---~g~~G~~P~~~v 230 (630)
..+++|+|||.+..+++ |+|++||++.|++..+++||.|+. +|..|+||+++.
T Consensus 38 ~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~~ 100 (337)
T 4dey_A 38 AFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 100 (337)
T ss_dssp CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred cEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHHH
Confidence 47899999999998765 999999999999999999999986 578999999874
No 227
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.32 E-value=1.3e-07 Score=77.73 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=48.6
Q ss_pred EEEEEeecc--CCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 179 VLAEAVWDH--VAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~--~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
..++|+|+| ......||.|++|+++.|++..+.+||.++. +|+.|++|.+||...
T Consensus 40 ~~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~ 97 (102)
T 1ri9_A 40 YSTKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADN 97 (102)
T ss_dssp SCCBCCTTSCSSCCCTTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC-
T ss_pred EEEEEeeccccccCCcccCCcCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhccc
Confidence 357788999 6777899999999999999999999999995 899999999999743
No 228
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=7e-06 Score=70.71 Aligned_cols=104 Identities=17% Similarity=0.234 Sum_probs=75.9
Q ss_pred CccEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcce-eeeCCCCCCCCCCcccceeEEE
Q psy1488 482 SSQLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQ-IINLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~-v~~~~d~~~~~~g~~~~~~f~I 559 (630)
....+++|.|.+.... +..+.|+++|.++.|.+.+... ....++.|+|..+. |...++.+ .-.++|.|
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~------~~~~~F~i 74 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKD------GKKCLFLV 74 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTT----CSSEEEEECCCTTCEEEEECCCT------TCCSEEEE
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCC----CcccCcEEEecCcEEEEECCCCC------CCeeEEEE
Confidence 4567889999876432 2357899999999999987532 23457889999764 43333322 22578999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhccc
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDRE 597 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~ 597 (630)
.. .++.|.|+|.+.+|++.|+.+|+.++........
T Consensus 75 ~~--~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~~~ 110 (115)
T 2dn6_A 75 KC--FDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSS 110 (115)
T ss_dssp EC--SSCEEEEECSSHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred Ee--CCCEEEEEcCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 65 3567999999999999999999999987765543
No 229
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.24 E-value=1.5e-05 Score=67.49 Aligned_cols=101 Identities=11% Similarity=0.086 Sum_probs=74.4
Q ss_pred cEEEeeeEEEEecC-----cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 484 QLIHQGEVIRVTSG-----MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
..+++|.|.+...+ ...+.|+|+|.++.|.+.+... ....++.|+|..+.+...++.. ......++|.
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~---~~~~~~~~F~ 74 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPHLR---RDSKKESCFE 74 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGC---SSGGGGGEEE
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC----CCCCCEEEEecceEEEeCCccc---cccCCcceEE
Confidence 46889999876642 3457899999999999987542 2334677899999876553211 1112468999
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
|.... .+.|.|+|.|.+|++.|+.+|+.+++..
T Consensus 75 i~~~~-~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 75 LTSQD-RRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp EECSS-SCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEcCC-CcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 97643 3678899999999999999999998764
No 230
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.22 E-value=1.4e-05 Score=68.96 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=74.9
Q ss_pred ccEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 483 SQLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 483 r~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
...+++|.|.+.... +..+.|+|+|.++.|.+.+... ....++.|+|..+.+..+.+... ...+++|.|..
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~----~~~~~~f~i~~ 77 (118)
T 1v89_A 6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----DTKPQGCMYLPGCTIKEIATNPE----EAGKFVFEIIP 77 (118)
T ss_dssp SCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----CCSCSEEECSTTEEEEEECCCSS----CCCCCEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCC----CCCceEEEECCCCEEEEcCcCcc----cCCcceEEEEC
Confidence 457899999876432 2357899999999999987542 13456789999998876543211 12368999987
Q ss_pred c------CCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 562 S------DKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 562 ~------~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
. ...+.|.|+|.|.+|++.|+.+|..++.
T Consensus 78 ~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 78 ASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp SCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 3 2456799999999999999999999876
No 231
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.21 E-value=2.1e-05 Score=72.97 Aligned_cols=105 Identities=12% Similarity=0.191 Sum_probs=73.7
Q ss_pred EEEeeeEEEEecC------cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCC-CCCCCCCcc-----
Q psy1488 485 LIHQGEVIRVTSG------MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPD-GKDPHLGVT----- 552 (630)
Q Consensus 485 ll~~G~l~~~~~~------~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d-~~~~~~g~~----- 552 (630)
+|++|.|.+...+ +..+.|+++|-++.|.|.+...........++.|+|..+.+++..+ .++...+..
T Consensus 3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~ 82 (169)
T 1btk_A 3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRG 82 (169)
T ss_dssp CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC----
T ss_pred eEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhccccccc
Confidence 5789999876432 2357999999999999999632213456788999999987554331 111111100
Q ss_pred --------------cceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 553 --------------VRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 553 --------------~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
.+++|.|.... +.|.|+|.|++|++.|+++|..++..
T Consensus 83 ~~~~~~~~~~i~~~~~~~F~I~t~~--rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 83 EESSEMEQISIIERFPYPFQVVYDE--GPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp -----CCTTHHHHCCCEEEEEEETT--CCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccccccccEEEEeCC--ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 12789998744 46889999999999999999998863
No 232
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=98.19 E-value=8.9e-07 Score=72.13 Aligned_cols=55 Identities=29% Similarity=0.526 Sum_probs=47.9
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecC--CCcccccC-CCccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLD--RDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~--~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
...|+|+|+ ...+..+|+|++|+++.|++..+ ++||.++. .|+.|++|.+||++-
T Consensus 28 l~~a~a~~~-~k~g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~vd 85 (96)
T 2gtj_A 28 IHLAKACCD-VKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEID 85 (96)
T ss_dssp CEEEEESSC-EECTTSCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEEC
T ss_pred EEEEEEeec-CCCCcccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEEE
Confidence 347899999 46678899999999999999976 67999995 899999999999753
No 233
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.19 E-value=1.3e-05 Score=68.19 Aligned_cols=102 Identities=11% Similarity=0.202 Sum_probs=71.8
Q ss_pred CccEEEeeeEEEEecC-cceeEEEEEEeCC--eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 482 SSQLIHQGEVIRVTSG-MWTNTITLFLFDH--QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~-~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
.+..+++|.|.+.... +..+.|+++|.++ .|.+.+.. .....++.|+|..+.|..+.+..+.. .....++|.
T Consensus 4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~----~~~~~~g~i~L~~~~v~~~~~~~~~~-~~~~~~~F~ 78 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPA----GAEDPLGAIHLRGCVVTSVESNSNGR-KSEEENLFE 78 (109)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTT----SCSSCSEEEECTTCEEEEECC---------CCSEEE
T ss_pred cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCC----CCCCccEEEECCCCEEEEccCCcccc-cCCCceEEE
Confidence 3568899999875432 2357899999998 88888643 22344678999998877655431100 012468999
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
|.... ...|.|+|.|.+|++.|+.+|+.++
T Consensus 79 i~~~~-~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 79 IITAD-EVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EECTT-CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCC-CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 97753 3568999999999999999999886
No 234
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.19 E-value=1.7e-05 Score=69.46 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=71.7
Q ss_pred EEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC
Q psy1488 485 LIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD 563 (630)
Q Consensus 485 ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~ 563 (630)
.+++|.|.+.... +..+.|+++|.++.|.+.+.... ...++.|+|..+.|....+. ..+++|.|....
T Consensus 5 ~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~v~~~~~~-------~~~~~f~i~~~~ 73 (127)
T 1fgy_A 5 PDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----KEPRGIIPLENLSIREVLDP-------RKPNCFELYNPS 73 (127)
T ss_dssp CSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEEECCS-------SCSSEEEEECSS
T ss_pred CceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCC----CCcceEEECCceEEEEccCC-------CCCceEEEecCC
Confidence 4678888766432 23568999999999999875321 23467889999988766543 236889887643
Q ss_pred C--------------------CeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 564 K--------------------DKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 564 ~--------------------~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
. .+.|.|+|.|.+|++.|+.+|+.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 74 HKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp STTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 2 368999999999999999999998864
No 235
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.19 E-value=9.9e-06 Score=71.78 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=70.7
Q ss_pred ccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec
Q psy1488 483 SQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS 562 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~ 562 (630)
...+++|.|.+...-+..+.|+|+|=++.|.+-+.... ....+.|+|..+.|.+.++.+ -.++|.|...
T Consensus 6 ~~v~k~GwL~K~g~~k~WkrRWfVLk~~~L~yyk~~~~----~~p~G~I~L~~~~v~~~~~~~-------~~~~F~i~~~ 74 (130)
T 1v88_A 6 SGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACEIIERPSKK-------DGFCFKLFHP 74 (130)
T ss_dssp SSCCEEEEEEECCSSSSCEEEEEEEETTEEEEESCSSS----CCCCEEEECSSCEECCCCTTT-------SSCEEEEECT
T ss_pred CceEEEeEEEEeCCCCCceEEEEEEECCEEEEECCCCC----CCceEEEEcCCCEEEECCCCC-------CCeEEEEEcC
Confidence 35678888876432233578999999999988875421 345788999999986544322 2589999764
Q ss_pred CC----------------------CeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 563 DK----------------------DKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 563 ~~----------------------~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.. ...|.|+|.|++|++.|+++|+.++.
T Consensus 75 ~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 75 LEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp TCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred CccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 32 13488999999999999999998875
No 236
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.16 E-value=1.8e-05 Score=67.97 Aligned_cols=100 Identities=15% Similarity=0.208 Sum_probs=73.2
Q ss_pred cEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec
Q psy1488 484 QLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS 562 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~ 562 (630)
..+++|.|.+.... +..+.|+|+|.++.|.+.+... ....++.|+|..+.+....... ....++|.|...
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~-----~~~~~~F~i~~~ 74 (113)
T 1pls_A 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQDF-----GKRMFVFKITTT 74 (113)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCCSS-----CCSSSEEEEEET
T ss_pred CCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC----CCCcceEEEcCCCEEEEecCCC-----CCCccEEEEEcC
Confidence 34678888765432 2356899999999999887542 2345678899998876522211 123689999764
Q ss_pred CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 563 DKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 563 ~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
..+.|.|+|.|.+|++.|+.+|+.++....
T Consensus 75 -~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 75 -KQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp -TTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 347899999999999999999999987654
No 237
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.15 E-value=2.2e-05 Score=67.52 Aligned_cols=95 Identities=20% Similarity=0.320 Sum_probs=73.2
Q ss_pred EEEeeeEEEEecC-c--ceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 485 LIHQGEVIRVTSG-M--WTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 485 ll~~G~l~~~~~~-~--~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
.++.|.|.+...+ . ..+.++++|=+++|.+-|-... ...++.|||+++.|.++.++.. .-+|+|.|..
T Consensus 12 VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~e----ke~~G~IpL~~~~vr~v~~~~~-----~rk~~F~l~~ 82 (125)
T 1dyn_A 12 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEE----KEKKYMLSVDNLKLRDVEKGFM-----SSKHIFALFN 82 (125)
T ss_dssp EEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTC----SCEEEEEECTTEEEEECCSCSS-----SSCEEEEEEE
T ss_pred eEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcc----cccceEEECCCceEeccCCCCC-----CCceEEEEEC
Confidence 7899999874322 1 1568999999999999985432 2346789999999999876521 3579999987
Q ss_pred cC------CCeEEEEEeCCHHHHHHHHHHHHHH
Q psy1488 562 SD------KDKWLLFCCRSLEDKARWLAAFQQE 588 (630)
Q Consensus 562 ~~------~~~~~~l~a~s~~ek~~W~~~L~~a 588 (630)
.+ ..+.|.|+|.|.+|++.|+.+|.+|
T Consensus 83 ~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 83 TEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 54 2358999999999999999999654
No 238
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.14 E-value=1.5e-05 Score=70.02 Aligned_cols=105 Identities=15% Similarity=0.207 Sum_probs=73.0
Q ss_pred ccEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCC---Cc--eeEEEeEeecCcceeeeCCCCCCCCCCccccee
Q psy1488 483 SQLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILK---RN--THVYKARLNIDTSQIINLPDGKDPHLGVTVRHA 556 (630)
Q Consensus 483 r~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~---~~--~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~ 556 (630)
+..+++|.|.+.... +..+.|+|+|-++.|.+-+..... .. .-.-++.|+|..+.|....++.. .-+++
T Consensus 10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~-----~k~~~ 84 (124)
T 2w2x_D 10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKN-----QKSFV 84 (124)
T ss_dssp ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBT-----TBSEE
T ss_pred hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcC-----CCCEE
Confidence 345788888776532 336789999999999888853110 00 12236889999999887665221 24689
Q ss_pred EEEEecCC-CeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 557 IKIHCSDK-DKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 557 f~I~~~~~-~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
|+|..... ...|.|.|.|.+|+..|+++|..++..+
T Consensus 85 F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 85 FILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp EEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred EEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 99987544 4578999999999999999999987654
No 239
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.13 E-value=1.8e-05 Score=67.36 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=67.6
Q ss_pred ccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec
Q psy1488 483 SQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS 562 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~ 562 (630)
...+++|.|.+. ..+..+.|+|+|-++.|.+-+.... ...-...|.|..+.|...++. ..+++|.|...
T Consensus 6 ~~~~~~G~L~K~-~~k~Wk~RwfvL~~~~L~yyk~~~~---~~~~~~~i~l~~~~v~~~~~~-------~~~~~F~i~~~ 74 (107)
T 2cof_A 6 SGLETSSYLNVL-VNSQWKSRWCSVRDNHLHFYQDRNR---SKVAQQPLSLVGCEVVPDPSP-------DHLYSFRILHK 74 (107)
T ss_dssp CCCTTCCEEEEE-ETTEEEEEEEEECSSCEEEECSSTT---CSEEEEEECTTTCEEECCCBT-------TBSCEEEEEET
T ss_pred CCCcEeEEEEEe-cCCCcceEEEEEECCEEEEEeCCcc---cCCCeeEEeccceEEEECCCC-------CCCeEEEEEeC
Confidence 345678888776 3444578999999999988875422 223345566766666543321 24689999874
Q ss_pred CCCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 563 DKDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 563 ~~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
..+.|.|+|.|.+|++.|+++|+.+.
T Consensus 75 -~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 75 -GEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp -TEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred -CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 26789999999999999999998764
No 240
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=2.4e-05 Score=67.54 Aligned_cols=102 Identities=15% Similarity=0.250 Sum_probs=74.5
Q ss_pred CCccEEEeeeEEEEec--CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 481 TSSQLIHQGEVIRVTS--GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
+....+++|.|.+... .+..+.|+|+|.++.|.+.+... ....++.|+|..+.|..+...+. ...+++|.
T Consensus 7 p~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~----~~~~~~F~ 78 (117)
T 2d9y_A 7 GNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDN----ISRKHTFK 78 (117)
T ss_dssp SSCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTT----CCSCCEEEECSSCEEEECCTTTT----CCCSSEEE
T ss_pred CCCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCC----CCCcCCEEEeCCeEEEEcCcccc----CCCccEEE
Confidence 4566789999987652 23357899999999999987532 12346789999988765533211 13468899
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
|... ..+.|.|+|.|.+|++.|+.+|..++..
T Consensus 79 i~~~-~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 79 AEHA-GVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp EECS-SSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred EEcC-CCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 8653 3467999999999999999999987643
No 241
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.10 E-value=4e-05 Score=66.95 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=66.4
Q ss_pred eeEEEEEEeCCeEEEEEeccCCC---cee--EEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCC
Q psy1488 500 TNTITLFLFDHQLVYCKRDILKR---NTH--VYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRS 574 (630)
Q Consensus 500 ~~~~~~fLF~d~Ll~~k~~~~~~---~~~--~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s 574 (630)
.+.+++.|-.+.|++-+.+..+. ..| .-.+.|+|.++.|...++.+ -+++|+|........|.|+|.|
T Consensus 24 Wkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~~~-------~~~~F~L~~~~~G~~Y~fqA~s 96 (126)
T 2dtc_A 24 WTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPE-------HPDIFQLNNPDKGNVYKFQTGS 96 (126)
T ss_dssp CEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTT-------STTEEEEECTTSCSEEEEECSS
T ss_pred cccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCCCC-------CCCEEEEeeCCCCCEEEEeCCC
Confidence 46899999999999999764221 122 34578999999997333322 3789999876456789999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy1488 575 LEDKARWLAAFQQERALV 592 (630)
Q Consensus 575 ~~ek~~W~~~L~~a~~~~ 592 (630)
+++...|+++|..|+...
T Consensus 97 ~~~~~~W~~ai~~a~~~~ 114 (126)
T 2dtc_A 97 RFHAILWHKHLDDACKSS 114 (126)
T ss_dssp HHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999988643
No 242
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=3.9e-05 Score=66.72 Aligned_cols=102 Identities=15% Similarity=0.243 Sum_probs=74.5
Q ss_pred cCCccEEEeeeEEEEec--CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeE
Q psy1488 480 ETSSQLIHQGEVIRVTS--GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAI 557 (630)
Q Consensus 480 ~~~r~ll~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f 557 (630)
.+....+++|.|.+... .+..+.|+|+|-++.|.+.+.... ...++.|+|..+.|..+...+. ...+++|
T Consensus 17 ~~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~v~~~~~~~~----~~~~~~F 88 (122)
T 2yry_A 17 NPNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE----ESILGSIPLLSFRVAAVQPSDN----ISRKHTF 88 (122)
T ss_dssp CTTCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC----CSCCEEEESTTCCCEECCTTCS----CSSSSEE
T ss_pred CCCCCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCC----CCcccEEEcCCCEEEEcCcccc----CCcccEE
Confidence 34567899999987642 233578999999999998875422 2346788999988765533211 1236889
Q ss_pred EEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 558 KIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 558 ~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.|... ..+.|.|+|.|.+|++.|+.+|..++.
T Consensus 89 ~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 89 KAEHA-GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEECS-SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEecC-CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 98653 356899999999999999999998864
No 243
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.09 E-value=2.1e-05 Score=68.47 Aligned_cols=104 Identities=11% Similarity=0.046 Sum_probs=75.1
Q ss_pred cEEEeeeEEEEec---CcceeEEEEEEeCC--eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 484 QLIHQGEVIRVTS---GMWTNTITLFLFDH--QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 484 ~ll~~G~l~~~~~---~~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
..+++|.|.+... .+..+.|+|+|-++ .|.+-+.... ...++.|+|..+.+....+ ...++|.
T Consensus 7 ~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~----~~~~g~I~L~~~~~~~~~~--------~~~~~F~ 74 (119)
T 2dhk_A 7 GKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD----ANPLDSIDLSSAVFDCKAD--------AEEGIFE 74 (119)
T ss_dssp CCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC----CSCSEEEEGGGCEEEECTT--------GGGCEEE
T ss_pred CCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC----cccccEEECCCCEEEecCC--------CCCCEEE
Confidence 3467888876542 12356899999998 8888875421 2456789999888765322 2357899
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcccCCcc
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDREDGLE 601 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~~~~~ 601 (630)
|... .+.|.|+|.+.+|++.|+++|+.++..+......+.+
T Consensus 75 i~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~p~~~~ 115 (119)
T 2dhk_A 75 IKTP--SRVITLKAATKQAMLYWLQQLQMKRWEFHNSPPAPSG 115 (119)
T ss_dssp EECS--SCCEEEECSSHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred EEeC--CcEEEEECCCHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 8764 5679999999999999999999999887665444333
No 244
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.08 E-value=1.2e-06 Score=86.11 Aligned_cols=54 Identities=28% Similarity=0.762 Sum_probs=49.9
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCCC---cccccCCCccccccccchhhc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRD---WWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~---Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
.+.++|+|.+..+.+|.|++|++|.|+.+.+.+ ||+|+.+|+.||||.+||+..
T Consensus 172 ~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~ 228 (239)
T 1ycs_B 172 VIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLY 228 (239)
T ss_dssp EEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECC
T ss_pred eEEEEeccCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeEC
Confidence 567999999999999999999999999887755 999999999999999999876
No 245
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.07 E-value=1.7e-05 Score=69.51 Aligned_cols=99 Identities=10% Similarity=0.129 Sum_probs=73.4
Q ss_pred ccEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 483 SQLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 483 r~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
+..+++|.|.+.... +..+.|+|+|.++.|.+.+... ....++.|+|..+.++...+.. ..+++|.|..
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~------~~~~~F~i~~ 85 (126)
T 1fao_A 16 SLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYSQ------ERVNCFCLVF 85 (126)
T ss_dssp CTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEEGGGCCEEEEECSS------SSSSEEEEEE
T ss_pred CCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCC----CCCceeEEEccceEEEEecccC------CCCCEEEEEe
Confidence 456789998876432 2357899999999999987542 1345678899998855443211 2368999976
Q ss_pred cCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 562 SDKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 562 ~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
.++.|.|+|.|.+|++.|+.+|..++..++
T Consensus 86 --~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 115 (126)
T 1fao_A 86 --PFRTFYLCAKTGVEADEWIKILRWKLSQIR 115 (126)
T ss_dssp --TTEEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred --CCcEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999997743
No 246
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.07 E-value=2.8e-06 Score=68.10 Aligned_cols=55 Identities=22% Similarity=0.378 Sum_probs=44.5
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEEEEecCC----CcccccCCCccccccccchhhcc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEVLDTLDR----DWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~----~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...+..+|.+..+-||++++||+|.|+.+.|+ +||+...+|+.||+|++|++.+.
T Consensus 19 LY~~t~~~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdtgg~~GyvPs~yLe~~~ 77 (92)
T 1ug1_A 19 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77 (92)
T ss_dssp EEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECC
T ss_pred eEEeccCcCCCCceeeeecCCCEEEEEecCCCCCCCcceEEECCCcEEeeEhhhceEcc
Confidence 34556677777888999999999999998763 45556669999999999998764
No 247
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.06 E-value=4e-05 Score=66.77 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=71.9
Q ss_pred EEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCC--cccceeEEEEe
Q psy1488 485 LIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLG--VTVRHAIKIHC 561 (630)
Q Consensus 485 ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g--~~~~~~f~I~~ 561 (630)
.+++|.|.+.... +..+.|+++|-.++|.+-|.... ...-...+.|+|..+.|....+.+....+ ....+.|.|.+
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~-~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~ 84 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADR-KKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHA 84 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCT-TTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEE
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCc-CcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEe
Confidence 6788999876542 33678999999998888864311 12233568899999999875543210000 01356788887
Q ss_pred cCC-----CeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 562 SDK-----DKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 562 ~~~-----~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
... ...|+|+|.|.+|++.|+++|+.+.
T Consensus 85 ~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 85 KQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 653 3589999999999999999998774
No 248
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.05 E-value=2.1e-05 Score=67.77 Aligned_cols=95 Identities=8% Similarity=0.140 Sum_probs=70.7
Q ss_pred CccEEEeeeEEEEec--CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEE
Q psy1488 482 SSQLIHQGEVIRVTS--GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I 559 (630)
+...+++|.|.+... .+..+.|+|+|.++.|.+.+.... ...++.|+|..+..+...+ .++|.|
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~----------~~~F~i 70 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE----MYSKGIIPLSAISTVRVQG----------DNKFEV 70 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCC----SSCCCEEETTTEEEEEEET----------TTEEEE
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCC----cccCCEEECCcceEEEeCC----------CCEEEE
Confidence 455678999987543 133578999999999999886422 2346778898875433222 478999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.. ..+.|.|+|.+.+|++.|+.+|+.++...
T Consensus 71 ~~--~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 71 VT--TQRTFVFRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp EE--SSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred Ee--CCcEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 75 45679999999999999999999998654
No 249
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.05 E-value=1.4e-05 Score=70.41 Aligned_cols=107 Identities=18% Similarity=0.226 Sum_probs=74.1
Q ss_pred cCCccEEEeeeEEEEecC-cceeEEEEEEeCC--eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCC--Ccccc
Q psy1488 480 ETSSQLIHQGEVIRVTSG-MWTNTITLFLFDH--QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHL--GVTVR 554 (630)
Q Consensus 480 ~~~r~ll~~G~l~~~~~~-~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~--g~~~~ 554 (630)
...+..+++|.|.+.... +..+.|+|+|.+| .|.+.+.. ......++.|+|..+.|..+.+...+.. +....
T Consensus 13 ~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~---~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~ 89 (129)
T 1x1g_A 13 ELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPS---KEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQG 89 (129)
T ss_dssp TTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSS---SCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCS
T ss_pred ccCCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCC---CcCCccceEEECcCCEEEEeCCCCCcccccCCCCC
Confidence 456789999999876432 3357899999954 77777642 1223456778999888776655311110 01136
Q ss_pred eeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 555 HAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 555 ~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
++|.|.... .+.|.|+|.|.+|++.|+.+|+.++.
T Consensus 90 ~~F~I~~~~-~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 90 NLFKVITKD-DTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp SCEEECCTT-CCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred ceEEEEcCC-CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 889997643 34688999999999999999998864
No 250
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.04 E-value=9.6e-05 Score=78.11 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=70.6
Q ss_pred cEEEeeeEEEEecC--c--ceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEE
Q psy1488 484 QLIHQGEVIRVTSG--M--WTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 484 ~ll~~G~l~~~~~~--~--~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I 559 (630)
..+++|.|.+.... . .++.|+|+|-++.|++-+.. ... -...|+|..+.|...++. .-+++|.|
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~-~~~----~~~~i~l~~~~v~~~~~~-------~r~~~F~i 344 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-DVA----GGLAMDIDNCSVMAVDCE-------DRRYCFQI 344 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECSS-CSS----CEEEEECTTCEEEEECCT-------TCSSEEEE
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCC-CcC----CCceEEccceEEEecccc-------CCCceEEE
Confidence 56789999875432 1 25789999999999887752 111 246789999888765442 23689999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.+....+.|.|+|.|++|++.|+.+|..++...
T Consensus 345 ~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 345 TSFDGKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp ECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred EeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 875433789999999999999999999887643
No 251
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.04 E-value=1e-05 Score=71.00 Aligned_cols=107 Identities=11% Similarity=0.146 Sum_probs=70.5
Q ss_pred ccEEEeeeEEEEecC-cceeEEEEEEeCC-eEEEEEeccCCCceeEEEeEeecCcceeeeC----CCCCCCCCCccccee
Q psy1488 483 SQLIHQGEVIRVTSG-MWTNTITLFLFDH-QLVYCKRDILKRNTHVYKARLNIDTSQIINL----PDGKDPHLGVTVRHA 556 (630)
Q Consensus 483 r~ll~~G~l~~~~~~-~~~~~~~~fLF~d-~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~----~d~~~~~~g~~~~~~ 556 (630)
...+++|.|.+.... +..+.|+|+|-.| .|.+.+.... ...++.|+|..+.+... .+. .-.++
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~----~~~~g~i~L~~~~~~~~~~~~~~~-------~~~~~ 74 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQ----DVDQREAPLNNFSVAQCQLMKTER-------PRPNT 74 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCC----SHHHHTSCSEEEECTTCEEEEECS-------SSTTE
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCC----CCCCceeEccceeEEeeeeccccc-------CCCCE
Confidence 457899999875432 2356899999965 7777764321 11234456665554321 111 23588
Q ss_pred EEEEec--CCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcccCCc
Q psy1488 557 IKIHCS--DKDKWLLFCCRSLEDKARWLAAFQQERALVEQDREDGL 600 (630)
Q Consensus 557 f~I~~~--~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~~~~ 600 (630)
|.|... ...+.|.|+|.|.+|++.|+.+|..++..........+
T Consensus 75 F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~~~~~ 120 (125)
T 1unq_A 75 FIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEM 120 (125)
T ss_dssp EEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcccchhhhh
Confidence 999763 34568999999999999999999999988765544433
No 252
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.04 E-value=0.00015 Score=77.18 Aligned_cols=98 Identities=11% Similarity=0.193 Sum_probs=71.9
Q ss_pred ccEEEeeeEEEEec-C---cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 483 SQLIHQGEVIRVTS-G---MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 483 r~ll~~G~l~~~~~-~---~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
....++|.|.+... | +.++.|||+|=++.|.+.+..... . ...|+|..|.|...++.+ -++||.
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~~-~----~~~~~l~~~~v~~~~~~~-------r~~cF~ 366 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVA-G----GLIQDLDNCSVMAVDCED-------RRYCFQ 366 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCSS-C----CCCBCSSCCEEEEECCTT-------CSSEEE
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCCC-C----CeEEECCceEEEECCCCC-------CCceEE
Confidence 34568999986532 2 236789999999998887643211 1 235678888876554432 368999
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
|.+....+.|+|+|.|.+|++.|+.+|..+++.+
T Consensus 367 i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 367 ITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp EECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred EEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 9887666789999999999999999999998654
No 253
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.04 E-value=1.8e-05 Score=69.67 Aligned_cols=105 Identities=10% Similarity=0.174 Sum_probs=74.9
Q ss_pred CccEEEeeeEEEEecC-cceeEEEEEEeCC--eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 482 SSQLIHQGEVIRVTSG-MWTNTITLFLFDH--QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~-~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
....+++|.|.+.... +..+.|+|+|.++ +|.+.+.. .....++.|+|..+.|..+.+..+.. .....++|.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~----~~~~~~g~i~L~~~~v~~~~~~~~~~-~~~~~~~F~ 89 (129)
T 1x05_A 15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPA----GAEDPLGAIHLRGCVVTSVESNSNGR-KSEEENLFE 89 (129)
T ss_dssp CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSS----CCSSCSEEEECTTCEEEECCCCCCSS-SCSSCSEEE
T ss_pred cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCC----CCCcceeEEEccCCEEEEccCCcccc-ccCCCeEEE
Confidence 4678999999875422 2356899999987 78777643 22345778999998887665432100 012468999
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
|.... .+.|.|+|.|.+|++.|+.+|+.++...
T Consensus 90 i~~~~-~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 90 IITAD-EVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp EECTT-CCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEcCC-CCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 97743 3468899999999999999999988644
No 254
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.03 E-value=3.5e-05 Score=67.02 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=70.7
Q ss_pred cEEEeeeEEEEec-C-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 484 QLIHQGEVIRVTS-G-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 484 ~ll~~G~l~~~~~-~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
.+.++|.|.+... . +..+.|+++|=+++|.+.+.-..+...-.-.+.|+|+.+.|..+....+. ..-+++|+|..
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~---~~~k~~F~~v~ 83 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGL---EGGRAFFNAVK 83 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSC---CSCSSEEEEEC
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCccc---ccCceEEEEec
Confidence 4789999988754 2 24568999999998888762111122233467889999887643221110 13468899876
Q ss_pred cCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 562 SDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 562 ~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
. .+.|.|+|.|++|++.||++|..|+-
T Consensus 84 ~--~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 84 E--GDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp S--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred C--CceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 4 34699999999999999999998874
No 255
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.03 E-value=4.5e-05 Score=66.45 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=74.7
Q ss_pred CCccEEEeeeEEEEec-C-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 481 TSSQLIHQGEVIRVTS-G-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~-~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
+....+++|.|.+... . +..+.|+|+|-++.|.+.+.... ...++.|+|..+.|........ ....++|.
T Consensus 7 p~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~v~~~~~~~~----~~~~~~f~ 78 (123)
T 1upq_A 7 PNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSRE----ESVLGSVLLPSYNIRPDGPGAP----RGRRFTFT 78 (123)
T ss_dssp TTSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTC----CSCCEEEEGGGCEEEECCSSCT----TSSSSEEE
T ss_pred CCCCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCC----cccceEEECCCCEEEECCCCcc----CCCcEEEE
Confidence 4566899999987653 1 23578999999999999875421 3446788999988876543211 12368888
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
|...+ .+.|.|+|.|.+|++.|+.+|..++...
T Consensus 79 i~~~~-~r~~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 79 AEHPG-MRTYVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp EECTT-SCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred EECCC-CeEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 86642 3578899999999999999999988643
No 256
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.00 E-value=4.7e-05 Score=66.85 Aligned_cols=101 Identities=15% Similarity=0.201 Sum_probs=74.6
Q ss_pred CCccEEEeeeEEEEec--CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 481 TSSQLIHQGEVIRVTS--GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
+....+++|.|.+... .+..+.|+|+|.++.|.+.+... ....++.|+|..+.|......+. ...+++|.
T Consensus 17 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~----~~~~~~F~ 88 (128)
T 2dkp_A 17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK----EEGILGSILLPSFQIALLTSEDH----INRKYAFK 88 (128)
T ss_dssp TTSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSEEEEECGGGSEEEECCGGGC----CSSCSEEE
T ss_pred CCCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEEcCceEEEEcCCccc----CCCCeEEE
Confidence 4567789999987653 22357899999999999987542 23457889999888766543211 12368999
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
|.... .+.|.|+|.|.+|++.|+++|..|..
T Consensus 89 i~~~~-~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 89 AAHPN-MRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EECSS-SCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEcCC-CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 97643 35688999999999999999998764
No 257
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.99 E-value=4.2e-05 Score=69.31 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=70.3
Q ss_pred ccEEEeeeEEEEecCc-ceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 483 SQLIHQGEVIRVTSGM-WTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 483 r~ll~~G~l~~~~~~~-~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
..++++|.|.+..... ..+.|+|.|-++.|.+-+.... ....+.|+|..+.+........ ...++|.|.+
T Consensus 16 ~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d----~~~~g~I~L~~~~~~~~~~~~~-----~~~~~F~I~t 86 (149)
T 1x1f_A 16 LPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKS----IIYVDKLDIVDLTCLTEQNSTE-----KNCAKFTLVL 86 (149)
T ss_dssp SCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSC----SSCSEECCCSSCCEEEECCCTT-----SCCCEEEEEC
T ss_pred CCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCc----cccCcEEECCCceEEeeccCCC-----CcCcEEEEEc
Confidence 3489999998765332 3568999999999999875422 2345788999987662221111 1257899876
Q ss_pred cCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 562 SDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 562 ~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
. ++.|.|+|.|.+|++.|+++|+.++.
T Consensus 87 ~--~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 87 P--KEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp S--SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred C--CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4 45689999999999999999987765
No 258
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.98 E-value=2.4e-05 Score=64.82 Aligned_cols=91 Identities=13% Similarity=0.133 Sum_probs=65.2
Q ss_pred EEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCC
Q psy1488 486 IHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDK 564 (630)
Q Consensus 486 l~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~ 564 (630)
.++|.|.+...- +..+.|+|+|-++.|.+.+.... ......+.++|..+.+..... .+++|.|.. .
T Consensus 2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~--~~~~~~~~i~l~~~~~~~~~~---------~~~~F~i~~--~ 68 (94)
T 2rsg_A 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE--TEYGCRGSICLSKAVITPHDF---------DECRFDISV--N 68 (94)
T ss_dssp CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG--GGTCCSEEEETTTCEEEECSS---------CSSEEEEEE--T
T ss_pred CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc--ccccceeeEecceeeeecCcc---------cceeEEEEe--C
Confidence 367777765321 23568999999999999875422 222345677888887754332 257888876 4
Q ss_pred CeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 565 DKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 565 ~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
++.|.|+|.|++|++.|+++|++|+
T Consensus 69 ~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 69 DSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp TEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred CeEEEEECCCHHHHHHHHHHHHhhc
Confidence 5789999999999999999998773
No 259
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=97.98 E-value=2.8e-06 Score=86.02 Aligned_cols=55 Identities=27% Similarity=0.430 Sum_probs=45.4
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCC---------cccccCC------Cccccccccchhh
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRD---------WWWGTRG------EASGWFPSAFVRL 232 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~---------Ww~g~~~------g~~G~~P~~~v~~ 232 (630)
..+++|+|||.++.+++|+|++||++.|++..++| ||.++.- +..|++|++|+..
T Consensus 4 sfyVRalfdy~~~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae 73 (308)
T 3kfv_A 4 SFYIRTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE 73 (308)
T ss_dssp CEEEEECSCBCCCSSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred cEEEEEecCcCCCCcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence 37899999999999999999999999999988766 9998742 3789999999854
No 260
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.98 E-value=2.3e-05 Score=68.47 Aligned_cols=105 Identities=10% Similarity=0.060 Sum_probs=73.1
Q ss_pred CCccEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEE
Q psy1488 481 TSSQLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I 559 (630)
.....+++|.|.+.... +..+.|+|+|.++.|.+.+.... ...++.|+|..+..+...... ......++|.|
T Consensus 10 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~~~---~~~~~~~~F~i 82 (125)
T 1eaz_A 10 QDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE----KEPLRVIPLKEVHKVQECKQS---DIMMRDNLFEI 82 (125)
T ss_dssp --CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC----SSCSEEEEGGGCCEEEECTTH---HHHTCSSEEEE
T ss_pred CCCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCC----CcceeEEEcccceEEeecccc---ccCCcCCEEEE
Confidence 34567889999876432 23578999999999999875422 234678889887644332110 00123678999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
.. .++.|.|+|.+.+|++.|+.+|..++.....
T Consensus 83 ~~--~~r~~~l~a~s~~e~~~W~~al~~~i~~~~~ 115 (125)
T 1eaz_A 83 VT--TSRTFYVQADSPEEMHSWIKAVSGAIVAQRG 115 (125)
T ss_dssp EC--SSCEEEEECSSHHHHHHHHHHHHHHHHHTC-
T ss_pred Ee--CCcEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 75 4568999999999999999999999976543
No 261
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.97 E-value=2.7e-06 Score=89.90 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=48.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEe---cCCCcccccCCC------ccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDT---LDRDWWWGTRGE------ASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~---~~~~Ww~g~~~g------~~G~~P~~~v~~~ 233 (630)
.++++|+|||.+..+.+|+|++||++.|++. .+.+||.++..+ ..|+||++|+...
T Consensus 106 ~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~ 170 (391)
T 3tsz_A 106 SFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ 170 (391)
T ss_dssp CEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHH
T ss_pred ccccccccccCCCCCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHH
Confidence 3789999999999999999999999999998 578999988422 4899999999653
No 262
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.97 E-value=2e-05 Score=66.42 Aligned_cols=93 Identities=13% Similarity=0.149 Sum_probs=66.9
Q ss_pred eeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCe
Q psy1488 488 QGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDK 566 (630)
Q Consensus 488 ~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~ 566 (630)
+|.|.+.... +..+.|+|+|.++.|.+.+.... .....++.|+|..+.|...++. .++|.|... ..+
T Consensus 2 eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~--~~~~~~g~i~L~~~~v~~~~~~---------~~~F~i~~~-~~r 69 (103)
T 3rcp_A 2 EGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDD--VCKGSKGSIKMAVCEIKVHSAD---------NTRMELIIP-GEQ 69 (103)
T ss_dssp EEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----CCCSCEEEGGGCEEECCTTC---------SSEEEEEET-TTE
T ss_pred ceEEEEccCCCCCeeceEEEEECCEEEEEecCCc--ccCCcccEEEeeeeEEEEcCCC---------CceEEEEeC-CCC
Confidence 5777665422 23578999999999999885421 1123468899988887543321 568988763 357
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 567 WLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 567 ~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.|.|+|.|.+|++.|+++|+.|+...
T Consensus 70 ~~~l~a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 70 HFYMKAVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTSCCC
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999887554
No 263
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.97 E-value=3.7e-05 Score=66.93 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=71.2
Q ss_pred cEEEeeeEEEEecC-cceeEEEEEEe--CCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 484 QLIHQGEVIRVTSG-MWTNTITLFLF--DHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-~~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
..+++|.|.+.... +..+.|+|+|- +..|.+.+.... .....++.|+|..+.|... +. -.++|.|.
T Consensus 7 ~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~--~~~~~~g~I~L~~~~v~~~-~~--------~~~~F~i~ 75 (120)
T 2d9x_A 7 GENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS--RNQKPRGTLQLAGAVISPS-DE--------DSHTFTVN 75 (120)
T ss_dssp CCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG--SSSCCSEEEECTTCCEECC-SS--------SSSCEEEC
T ss_pred CCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc--cCCCccceEEcceEEEEec-CC--------CCCEEEEE
Confidence 34578888765532 33578999998 457877765422 1224578899999876432 21 25789987
Q ss_pred ecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcc
Q psy1488 561 CSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDR 596 (630)
Q Consensus 561 ~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~ 596 (630)
..+ .+.|.|+|.+.+|++.|+++|+.++.......
T Consensus 76 ~~~-~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 76 AAS-GEQYKLRATDAKERQHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp CSS-SCCEEECCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CCEEEEECCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 543 36799999999999999999999998776543
No 264
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.97 E-value=5.3e-05 Score=68.52 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=75.3
Q ss_pred CccEEEeeeEEEEecC-----cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCccccee
Q psy1488 482 SSQLIHQGEVIRVTSG-----MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHA 556 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~ 556 (630)
.+..+++|.|.+.... +..+.|+|+|-++.|.+.+... ....++.|+|..+.|...++... ...-.++
T Consensus 14 ~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~---~~~~~~~ 86 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRK---DGKKDCC 86 (148)
T ss_dssp CSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECTTSCS---STTGGGE
T ss_pred CCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC----CcccceEEEcCCcEEEECCCccc---CCCCccE
Confidence 3678999999886532 2457899999999999987542 23456788999998876543110 1123589
Q ss_pred EEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 557 IKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 557 f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
|.|...+ .+.|.|+|.|.++++.|+.+|+.++.....
T Consensus 87 F~I~~~~-~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 87 FEICAPD-KRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp EEEECTT-SCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred EEEECCC-CcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 9997643 368999999999999999999999876543
No 265
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.96 E-value=5.1e-06 Score=95.10 Aligned_cols=56 Identities=32% Similarity=0.535 Sum_probs=49.6
Q ss_pred eEEEEEeeccCCCCCCC-----CCCCCCCEEEEEEecCCCcccccCC------Cccccccccchhhc
Q psy1488 178 VVLAEAVWDHVAMEAEE-----LGFRAGDVIEVLDTLDRDWWWGTRG------EASGWFPSAFVRLR 233 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~e-----L~f~~gd~i~vl~~~~~~Ww~g~~~------g~~G~~P~~~v~~~ 233 (630)
.++++|+|||.+..+++ |+|++||++.|++..+++||.++.. +..|+||++|+...
T Consensus 427 ~~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~ 493 (721)
T 2xkx_A 427 GFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER 493 (721)
T ss_pred ceeEEEeeccCcCCCCCCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHH
Confidence 47899999999999888 9999999999999999999999853 45799999999643
No 266
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.96 E-value=3.2e-05 Score=70.09 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=73.9
Q ss_pred CCccEEEeeeEEEEecC-------cceeEEEEEEeCC-----eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCC
Q psy1488 481 TSSQLIHQGEVIRVTSG-------MWTNTITLFLFDH-----QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPH 548 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~~-------~~~~~~~~fLF~d-----~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~ 548 (630)
.....+++|.|.+...+ +..+.|+|+|.++ .|.+.+... .....++.|+|..+.+....+.
T Consensus 14 ~~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~---~~~~~~g~I~L~~~~~~~~~~~---- 86 (150)
T 1wg7_A 14 QKGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK---ISKEPKGSIFLDSCMGVVQNNK---- 86 (150)
T ss_dssp CSCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSC---CSSCCSEEECTTTCCEECCCCS----
T ss_pred CCCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCC---CCCCcCcEEecccCEEEecCCC----
Confidence 34667899999875421 2356899999997 888876542 1234567899999887654321
Q ss_pred CCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 549 LGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 549 ~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.-+++|.|...+ .+.|.|+|.+.+|+..|+.+|..++...
T Consensus 87 ---~~~~~F~i~~~~-~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 87 ---VRRFAFELKMQD-KSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp ---SCTTEEEEECSS-SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEEeCC-CcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 236899997753 3689999999999999999999998643
No 267
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.94 E-value=0.00011 Score=62.63 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=70.4
Q ss_pred cEEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec
Q psy1488 484 QLIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS 562 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~ 562 (630)
..+++|.|.+...+ +..+.|+|+|-++.|.+-+.... ...+..|+|..+.+....+.. ..+++|.|...
T Consensus 7 ~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~----~~~~~~i~L~~~~~~~~~~~~------~~~~~F~i~~~ 76 (109)
T 1wgq_A 7 GSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED----VAALESQPLLGFTVTLVKDEN------SESKVFQLLHK 76 (109)
T ss_dssp SCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC----SSCSEEEECSSEEEEECCCSS------CSSSEEEEEET
T ss_pred CCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCc----CccCceEECCCCEEEECCCCC------CCCcEEEEEeC
Confidence 34678888876432 33578999999999988875422 224578899999887665432 12589999763
Q ss_pred CCCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 563 DKDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 563 ~~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
..+.|.|+|.|++|++.|+.+|+.|+
T Consensus 77 -~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 77 -GMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp -TEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 34679999999999999999999875
No 268
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=0.00018 Score=61.87 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=70.1
Q ss_pred ccEEEeeeEEEEecC--cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 483 SQLIHQGEVIRVTSG--MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 483 r~ll~~G~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
...+++|.|.+...+ +..+.|+|+|-++.|.+.+..... -...+.+..+.|...++ -+++|.|.
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~-----~~~~i~l~~~~v~~~~~---------~~~~F~I~ 73 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNR-----QPAKLNLLTCQVKPNAE---------DKKSFDLI 73 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCCS-----CCEEEETTTSEEEECSS---------SSSCEEEE
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCCC-----CCCEEEeeeeEEEECCC---------CCCEEEEE
Confidence 345789999876642 345789999999999887753221 12334555555542221 25789998
Q ss_pred ecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhccc
Q psy1488 561 CSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDRE 597 (630)
Q Consensus 561 ~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~~ 597 (630)
. ..+.|.|+|.|++|++.|+.+|..++....+...
T Consensus 74 ~--~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 108 (114)
T 2da0_A 74 S--HNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF 108 (114)
T ss_dssp E--TTEEEEEECSSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred c--CCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 4678999999999999999999999988755443
No 269
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.90 E-value=0.00019 Score=63.31 Aligned_cols=103 Identities=10% Similarity=0.092 Sum_probs=72.6
Q ss_pred ccEEEeeeEEEE---ecC----cceeEEEEEEeCCeEEEEEeccCCC-------ceeEEEeEeecCcceeeeCCCCCCCC
Q psy1488 483 SQLIHQGEVIRV---TSG----MWTNTITLFLFDHQLVYCKRDILKR-------NTHVYKARLNIDTSQIINLPDGKDPH 548 (630)
Q Consensus 483 r~ll~~G~l~~~---~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~-------~~~~~k~~i~L~~~~v~~~~d~~~~~ 548 (630)
..++++|.|.+. ..| +..+.++++|=++.|.|-|...... ....-.+.|+|..+.|....+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~--- 86 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLS--- 86 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSC---
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCC---
Confidence 467899999763 123 2346899999999999988542110 12345678999999876543221
Q ss_pred CCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 549 LGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 549 ~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.-+++|.|.+. ....|.|+|.|++|++.|+++|+.++...
T Consensus 87 ---kr~~~F~l~t~-~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 87 ---SRRNVLHIRTI-PGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp ---SSSSEEEEECT-TSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCcEEEEEcC-CCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 23689999753 34579999999999999999999999765
No 270
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.89 E-value=6.7e-05 Score=64.62 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=69.9
Q ss_pred cEEEeeeEEEEecC-cceeEEEEEEe--CCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCC-CCcccceeEEE
Q psy1488 484 QLIHQGEVIRVTSG-MWTNTITLFLF--DHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPH-LGVTVRHAIKI 559 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-~~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~-~g~~~~~~f~I 559 (630)
..+++|.|.+.... +..+.|+|+|. ++.|.+.+.... ...++.|+|..+.++...+..... ....-.++|.|
T Consensus 7 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~----~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i 82 (117)
T 1v5u_A 7 GRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD----TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDV 82 (117)
T ss_dssp SSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSC----SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEE
T ss_pred CccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCC----CccceEEEccCcEEEeecCccccccccCCCCeEEEE
Confidence 45678888765432 23568999999 789988875422 235678999998866543321100 11233578999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.. ..+.|.|+|.|.+|++.|+++|+.++.
T Consensus 83 ~~--~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 83 KT--TRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp EE--SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred EC--CCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 65 456799999999999999999987654
No 271
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=97.87 E-value=5.9e-05 Score=66.82 Aligned_cols=104 Identities=11% Similarity=0.053 Sum_probs=70.8
Q ss_pred cEEEeeeEEEEe--cC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCccee---eeCCCCCCCCCCcccceeE
Q psy1488 484 QLIHQGEVIRVT--SG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQI---INLPDGKDPHLGVTVRHAI 557 (630)
Q Consensus 484 ~ll~~G~l~~~~--~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v---~~~~d~~~~~~g~~~~~~f 557 (630)
..+++|.|.+.. .+ +..+.|+|+|-++.|.+-+.... ......++.|+|..+.+ ...++.. ..-+++|
T Consensus 4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d-~~~~~p~g~I~L~~~~~~~v~~~~~~~-----~~~~~~F 77 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDD-EKRKNPIGRINLANCTSRQIEPANREF-----CARRNTF 77 (134)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHH-HTTSCCSEEEEGGGBCSSSCEECCTTT-----CCCTTEE
T ss_pred CceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCc-ccccCceEEEEhhhCccccccccchhh-----ccCCCEE
Confidence 456888888762 22 23568999999999999874211 11123467889998874 2222210 1236889
Q ss_pred EEEec--CC----------------CeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 558 KIHCS--DK----------------DKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 558 ~I~~~--~~----------------~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
.|... .. .+.|.|+|.|++|+..|+.+|..++..+.
T Consensus 78 ~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~~ 131 (134)
T 2y7b_A 78 ELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIR 131 (134)
T ss_dssp EEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHh
Confidence 98762 11 13699999999999999999999998764
No 272
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.86 E-value=6.2e-06 Score=79.73 Aligned_cols=57 Identities=30% Similarity=0.565 Sum_probs=52.7
Q ss_pred eEEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccCCCccccccccchhhcc
Q psy1488 178 VVLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLRV 234 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~~ 234 (630)
...++|+|+|.++.+++|.|++||++.|.+..+.+||.+...|+.|++|.+|+....
T Consensus 14 ~~~~~al~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~ 70 (222)
T 3ehr_A 14 VKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA 70 (222)
T ss_dssp CEEEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHE
T ss_pred ceEEEEeCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccc
Confidence 357899999999999999999999999999999999999999999999999997553
No 273
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.85 E-value=5.9e-05 Score=64.79 Aligned_cols=95 Identities=11% Similarity=0.084 Sum_probs=64.7
Q ss_pred EeeeEEEEecCcceeEEEEEEeCC--eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCC
Q psy1488 487 HQGEVIRVTSGMWTNTITLFLFDH--QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDK 564 (630)
Q Consensus 487 ~~G~l~~~~~~~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~ 564 (630)
..|.|.+....+..+.++|+|=++ .+|++-+.. ....-.+.|+|..+.|......+. ..-+++|+|.. .
T Consensus 10 ~~G~L~k~~~~~~WkkrWfVL~~~~~~~Ly~Yk~~---~d~~p~g~I~L~g~~V~~~~~~~~----~~~~~~Fki~~--~ 80 (112)
T 2coc_A 10 LCGPLRLSESGETWSEVWAAIPMSDPQVLHLQGGS---QDGRLPRTIPLPSCKLSVPDPEER----LDSGHVWKLQW--A 80 (112)
T ss_dssp SEEEEEEESSSSCEEEEEEECCTTCTTCEEEECCT---TCSSSCSEECGGGCEEECCCSSSC----CSSSEEEEEEE--T
T ss_pred EEEEEEecCCCCCceEEEEEEECCCccEEEEECCC---CccCcceEEEcCCCEEEecCcccc----cCCCCEEEEec--C
Confidence 458887755445567888888764 344443221 112345889999999875322221 12478999984 3
Q ss_pred CeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 565 DKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 565 ~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.+.|.|+|.|+++.++|+++|..|..
T Consensus 81 ~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 81 KQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 56899999999999999999998753
No 274
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.84 E-value=7.5e-06 Score=87.86 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=48.6
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEe---cCCCcccccC---CC---ccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDT---LDRDWWWGTR---GE---ASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~---~~~~Ww~g~~---~g---~~G~~P~~~v~~~ 233 (630)
++++|+|+|.+..+.+|+|++||++.|++. .+.+||+++. ++ +.|+||++|+...
T Consensus 99 ~yVralfdy~~~~~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e~ 162 (468)
T 3shw_A 99 FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ 162 (468)
T ss_dssp EEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHHH
T ss_pred cccccccCcCCCCCCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHHH
Confidence 689999999999999999999999999998 6789999884 33 6899999999653
No 275
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.82 E-value=0.00018 Score=63.25 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=62.0
Q ss_pred cEEEeeeEEEEec---CcceeEEEEEEeCCeEEEEEecc------CCCcee-----E---EEeEeecCcceeeeCCCCCC
Q psy1488 484 QLIHQGEVIRVTS---GMWTNTITLFLFDHQLVYCKRDI------LKRNTH-----V---YKARLNIDTSQIINLPDGKD 546 (630)
Q Consensus 484 ~ll~~G~l~~~~~---~~~~~~~~~fLF~d~Ll~~k~~~------~~~~~~-----~---~k~~i~L~~~~v~~~~d~~~ 546 (630)
..+++|.|.+... .+..+.|+|+|-+|-+++-.... ...... . -.+.|+|..+.+..+..+..
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~ 82 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA 82 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence 3578999988632 13467899999976555555320 000000 0 01223333333321110000
Q ss_pred CCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 547 PHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 547 ~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.. ...-.++|.|.+. ..+.|.|+|.|++|++.|+++|+.++...
T Consensus 83 ~~-~~~~~~~F~I~t~-~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 83 GQ-AEEENFEFLIVSS-TGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp SS-CCCCCCCEEEECT-TSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cc-cccCCceEEEEcC-CCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 00 0123688999764 33689999999999999999999998764
No 276
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.77 E-value=0.00022 Score=63.60 Aligned_cols=100 Identities=15% Similarity=0.194 Sum_probs=72.6
Q ss_pred EEeeeEEEEec-CcceeEEEEEEeCCeEEEEEeccCC--------------Cc------e--------------------
Q psy1488 486 IHQGEVIRVTS-GMWTNTITLFLFDHQLVYCKRDILK--------------RN------T-------------------- 524 (630)
Q Consensus 486 l~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~~--------------~~------~-------------------- 524 (630)
++.|.|++... .+....++|+||.+.|.|++..... .. .
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 36777765432 2345789999999999998722100 00 0
Q ss_pred -----eEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCC-CeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 525 -----HVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDK-DKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 525 -----~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~-~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
-..++.|.|..+.|...++++. .-++.|+|..... ...|.|.|.|.++...|+++|++|+.
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~-----~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKN-----NRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSS-----SCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccceEecCccEEEeccCCCC-----CCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0127899999999988776543 3478999987655 56899999999999999999998864
No 277
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=97.70 E-value=1.7e-05 Score=80.24 Aligned_cols=54 Identities=28% Similarity=0.541 Sum_probs=40.1
Q ss_pred eEEEEEeeccCCCCCC-----CCCCCCCCEEEEEEecCCCcccccC------CCccccccccchh
Q psy1488 178 VVLAEAVWDHVAMEAE-----ELGFRAGDVIEVLDTLDRDWWWGTR------GEASGWFPSAFVR 231 (630)
Q Consensus 178 ~~~~~aly~~~~~~~~-----eL~f~~gd~i~vl~~~~~~Ww~g~~------~g~~G~~P~~~v~ 231 (630)
.++++|+|||.+..++ .|+|++||++.|.+..+++||.++. .+..|++|+....
T Consensus 5 s~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~~~ 69 (292)
T 3tvt_A 5 SLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRW 69 (292)
T ss_dssp CCEEEECSCBCC---------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHHHH
T ss_pred eEEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChHHH
Confidence 3789999999998765 5999999999999999999999984 2258999996553
No 278
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=97.68 E-value=0.00039 Score=59.30 Aligned_cols=100 Identities=19% Similarity=0.331 Sum_probs=62.6
Q ss_pred EEEeeeEEEEecC-cceeEEEEEEe-CCeEEEEEeccCCCceeEEEeEeecCcceee-----eCCCCCCCCCCcccceeE
Q psy1488 485 LIHQGEVIRVTSG-MWTNTITLFLF-DHQLVYCKRDILKRNTHVYKARLNIDTSQII-----NLPDGKDPHLGVTVRHAI 557 (630)
Q Consensus 485 ll~~G~l~~~~~~-~~~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~-----~~~d~~~~~~g~~~~~~f 557 (630)
.+++|.|.+.... +..+.|+|+|. ++.|.+.+... ....++.|+|....|. .+.... ...+...+++|
T Consensus 5 ~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~----~~~~~g~i~l~~~~i~l~~~~~v~~v~-~~~~~~~~~~F 79 (112)
T 3aj4_A 5 FVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQT----RQNIEDKVHMPMDCINIRTGQECRDTQ-PPDGKSKDCML 79 (112)
T ss_dssp CSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTT----CCSEEEEEEHHHHEEEEEEGGGCCSCC-CSTTCCGGGEE
T ss_pred eeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCC----CCCCCccccccccceeecccccccccC-CCCCCCcCcEE
Confidence 4678888775432 23568999994 55777776432 1234566776654321 111100 00111235799
Q ss_pred EEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 558 KIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 558 ~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.|.+. ..+.|.|+|.|++|++.|+++|+.|+.
T Consensus 80 ~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 80 QIVCR-DGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEET-TSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEec-CCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 99764 356899999999999999999998863
No 279
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=97.67 E-value=0.00037 Score=67.04 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=75.0
Q ss_pred ccEEEeeeEEEEecC-----cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeE
Q psy1488 483 SQLIHQGEVIRVTSG-----MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAI 557 (630)
Q Consensus 483 r~ll~~G~l~~~~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f 557 (630)
...+++|.|.+...+ +.++.|+|+|-++.|.+.+.... ...++.|+|..+.+...++... ...-.++|
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~----~~p~g~I~L~~~~~v~~~~~~~---~~~k~~~F 176 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRK---DGKKDCCF 176 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEECGGGCS---STTGGGEE
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC----ccceEEEEeCCcEEEEcCCccc---cCCCCCEE
Confidence 468999999887642 24578999999999999875422 3346789999998876432100 01235899
Q ss_pred EEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 558 KIHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 558 ~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
.|...+ .+.|.|+|.+.++++.|+.+|+.++..
T Consensus 177 ~I~t~~-~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 177 EICAPD-KRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp EEECSS-SCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEcCC-CCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 997642 468999999999999999999999864
No 280
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.61 E-value=0.00032 Score=61.07 Aligned_cols=102 Identities=16% Similarity=0.099 Sum_probs=66.0
Q ss_pred cEEEeeeEEEEec---------CcceeEEEEEEeCCeEEEEEeccCCCc--eeEEEeEeecCcceeeeCCCCCCCCCCcc
Q psy1488 484 QLIHQGEVIRVTS---------GMWTNTITLFLFDHQLVYCKRDILKRN--THVYKARLNIDTSQIINLPDGKDPHLGVT 552 (630)
Q Consensus 484 ~ll~~G~l~~~~~---------~~~~~~~~~fLF~d~Ll~~k~~~~~~~--~~~~k~~i~L~~~~v~~~~d~~~~~~g~~ 552 (630)
..+++|.|.+... .+..+.++++|-++.|.+-+....... .+.-...|.|..+.+....+.. .
T Consensus 7 ~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~------~ 80 (123)
T 1wjm_A 7 GEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYR------K 80 (123)
T ss_dssp CCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCS------S
T ss_pred CeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeeccccc------C
Confidence 3457777765431 233568999999999998875422111 1111224556555544333211 2
Q ss_pred cceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 553 VRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 553 ~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
-+++|.|.... .+.|.|+|.|++|++.|+.+|+.++...
T Consensus 81 r~~~F~i~~~~-~~~~~f~A~s~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 81 RKHVFKLGLQD-GKEYLFQAKDEAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp CSSEEEEECSS-SCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEcC-CcEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 47899997643 3579999999999999999999988743
No 281
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.56 E-value=0.00026 Score=68.97 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=71.5
Q ss_pred ccEEEeeeEEEEecC------cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCccccee
Q psy1488 483 SQLIHQGEVIRVTSG------MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHA 556 (630)
Q Consensus 483 r~ll~~G~l~~~~~~------~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~ 556 (630)
...+++|.|.+.... ...+.|+|+|.++.|.+.+.... ...++.|+|..+.++..... -+++
T Consensus 56 ~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~I~L~~~~~v~~~~~--------k~~~ 123 (228)
T 3tfm_A 56 QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE----EKLKGTVEVRSAKEIIDNTN--------KENG 123 (228)
T ss_dssp CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----CSEEEEEEGGGCSEEEEETT--------TTSE
T ss_pred CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----cceeEEEEcCCCEEeccCCC--------CCcE
Confidence 345678888765432 33578999999999999975421 35678899999886542221 2578
Q ss_pred EEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 557 IKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 557 f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
|.|.. .++.|.|+|.|.+|++.|+.+|..++..
T Consensus 124 F~I~t--~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 124 IDIIM--ADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp EEEEC--SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEc--CCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 99965 4568999999999999999999999963
No 282
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=97.54 E-value=1.7e-06 Score=90.00 Aligned_cols=52 Identities=15% Similarity=0.244 Sum_probs=42.6
Q ss_pred EEeeccCC----CCCCCCCC--CCCCEEEEEEecCCCcccccCCC---cccccccc-chhhc
Q psy1488 182 EAVWDHVA----MEAEELGF--RAGDVIEVLDTLDRDWWWGTRGE---ASGWFPSA-FVRLR 233 (630)
Q Consensus 182 ~aly~~~~----~~~~eL~f--~~gd~i~vl~~~~~~Ww~g~~~g---~~G~~P~~-~v~~~ 233 (630)
.|+|+|.+ .++.+|+| ++||+|.|++..|+|||.|+++| +.||||.+ ||+..
T Consensus 270 ~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~~~v~~~ 331 (341)
T 2dyb_A 270 KDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQK 331 (341)
T ss_dssp HHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSCEEEEEC
T ss_pred hhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecceeEEEec
Confidence 57999988 55666666 89999999999999999999755 55599998 77654
No 283
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=97.53 E-value=0.0009 Score=57.31 Aligned_cols=94 Identities=16% Similarity=0.081 Sum_probs=61.8
Q ss_pred EeeeEEEEecC-----cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceee--eCCCCCCCCCCcccceeEEE
Q psy1488 487 HQGEVIRVTSG-----MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQII--NLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 487 ~~G~l~~~~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~--~~~d~~~~~~g~~~~~~f~I 559 (630)
++|.|.+...+ +..+.++++|=++.|.+-+...... -...|+|....+. ...+.. .-+|+|+|
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~----p~~~i~l~~~~~~~~~~~~~~------~r~~~F~l 71 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVI----PLLSVNMGGEQCGGCRRANTT------DRPHAFQV 71 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCS----CSEEEETTC-CEEEEEECCCS------SCTTEEEE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCC----ccceEEecCCEEEeeeccCCC------CCCeEEEE
Confidence 46777643221 2356899999999988887542211 2456777755432 111211 23689999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
...+ ...|.|+|.|++|.+.|+++|..++..
T Consensus 72 ~~~~-~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 72 ILSD-RPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp EETT-SCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EcCC-CCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 8653 346899999999999999999988754
No 284
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.51 E-value=0.00056 Score=60.01 Aligned_cols=103 Identities=10% Similarity=-0.012 Sum_probs=65.1
Q ss_pred CccEEEeeeEEEEecC--cceeEEEEEEe--CCeEEEE-EeccCCCceeEEEeEeecCcc-eeeeCCCCCCCCCCcccce
Q psy1488 482 SSQLIHQGEVIRVTSG--MWTNTITLFLF--DHQLVYC-KRDILKRNTHVYKARLNIDTS-QIINLPDGKDPHLGVTVRH 555 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~--~~~~~~~~fLF--~d~Ll~~-k~~~~~~~~~~~k~~i~L~~~-~v~~~~d~~~~~~g~~~~~ 555 (630)
.|...++|.|.+...+ +..+.|+|+|= .+.+++- +........-...+.|+|..+ .|........ ....+
T Consensus 12 ~~~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~----~~~~~ 87 (126)
T 1v5p_A 12 DRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQK----PKTPF 87 (126)
T ss_dssp CCCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTS----CSCSS
T ss_pred cCCCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccC----CCCCE
Confidence 4556679999876522 23567887775 1555555 431111123456788999984 4443321111 12357
Q ss_pred eEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 556 AIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 556 ~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
+|.|. ...+.|.|+|.|++|++.|+++|..+..
T Consensus 88 ~F~i~--t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 88 CFVIN--ALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EEEEE--CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEEEE--CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 88774 3567899999999999999999997764
No 285
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.51 E-value=0.0011 Score=58.27 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=63.8
Q ss_pred CccEEEeeeEEEEecC-cceeEEEEEEe-CCeEEEEEeccCCCceeEEEeEeecCc--ceeee---CCCCCCCCCCcccc
Q psy1488 482 SSQLIHQGEVIRVTSG-MWTNTITLFLF-DHQLVYCKRDILKRNTHVYKARLNIDT--SQIIN---LPDGKDPHLGVTVR 554 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~-~~~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~k~~i~L~~--~~v~~---~~d~~~~~~g~~~~ 554 (630)
+...+++|.|.+.... +..+.|+|+|. ++.|.+-+.... ...++.|.+.. ..|.. ..+.. ......-+
T Consensus 5 ~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~----~~~~g~i~l~~~~~~i~~~~~~~~v~-~~~~~~~~ 79 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA----QDEEDRVVIHFNVRDIKVGQECQDVQ-PPEGRSRD 79 (130)
T ss_dssp CCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSST----TSEEEEEECTTTEEEEEEGGGCSSCC-CCSSCCTT
T ss_pred CCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCC----CCcCceEecccceeEEeccccccccC-CCCCCCcC
Confidence 3567899999876432 23568999995 777777764321 12344454432 11211 00000 00112236
Q ss_pred eeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 555 HAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 555 ~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
++|.|.+.. .+.|.|+|.|++|++.|+++|+.++.
T Consensus 80 ~~F~I~~~~-~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 80 GLLTVNLRE-GSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TEEEEEETT-SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cEEEEEeCC-CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 899998743 35799999999999999999998875
No 286
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.41 E-value=0.0014 Score=65.07 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=73.3
Q ss_pred ccEEEeeeEEEE------ec-------CcceeEEEEEEeCCeEEEEEeccCCC--ceeEEEeEeecCcceeeeCCCCCCC
Q psy1488 483 SQLIHQGEVIRV------TS-------GMWTNTITLFLFDHQLVYCKRDILKR--NTHVYKARLNIDTSQIINLPDGKDP 547 (630)
Q Consensus 483 r~ll~~G~l~~~------~~-------~~~~~~~~~fLF~d~Ll~~k~~~~~~--~~~~~k~~i~L~~~~v~~~~d~~~~ 547 (630)
..++++|.|.+. .. .+.++.++++|-++.|.+-+.+.... ......+.|+|..+.|....+..
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~-- 86 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHP-- 86 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCS--
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCC--
Confidence 457888888721 11 12356899999999999988532111 12334577899888877654432
Q ss_pred CCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 548 HLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 548 ~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
.-+++|.|.+. ..+.|.|+|.|++|++.|+.+|..++.....
T Consensus 87 ----kk~~~F~I~t~-~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~ 128 (263)
T 3a8p_A 87 ----KKEHVFCLSNS-CGDVYLFQATSQTDLENWVTAIHSACASLFA 128 (263)
T ss_dssp ----SCSSEEEEECT-TSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEEcC-CCcEEEEEcCCHHHHHHHHHHHHHHHHhccc
Confidence 13689999763 4567999999999999999999999987653
No 287
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.40 E-value=0.00091 Score=69.40 Aligned_cols=96 Identities=11% Similarity=0.131 Sum_probs=71.9
Q ss_pred EEEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC
Q psy1488 485 LIHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD 563 (630)
Q Consensus 485 ll~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~ 563 (630)
.+++|.|.+.... +.++.|+++|-++.|.+.+.... ...++.|+|..+.|....+. .-+++|.|....
T Consensus 213 ~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~----~~p~G~I~L~~~~v~~~~~~-------~~~~~F~I~~~~ 281 (347)
T 2r09_A 213 PDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----KEPRGIIPLENLSIREVEDP-------RKPNCFELYNPS 281 (347)
T ss_dssp CCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEEECCS-------SCSSEEEEECSS
T ss_pred cccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCc----cCCcEEEEcCCeEEEEccCC-------CCCCEEEEEeCC
Confidence 4789999875432 23578999999999988875422 23467899999988766542 236889987642
Q ss_pred --------------------CCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 564 --------------------KDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 564 --------------------~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
..+.|.|+|.|.+|+..|+.+|+.++..
T Consensus 282 ~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~ 329 (347)
T 2r09_A 282 HKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 329 (347)
T ss_dssp STTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 1467999999999999999999988763
No 288
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=97.38 E-value=0.00068 Score=57.02 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=54.1
Q ss_pred eeEEEEEEeCCeEEEEEeccCC--CceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHH
Q psy1488 500 TNTITLFLFDHQLVYCKRDILK--RNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLED 577 (630)
Q Consensus 500 ~~~~~~fLF~d~Ll~~k~~~~~--~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~e 577 (630)
.+.++++|=++.|.+-+..... ...+.-...|.|..+.+....+.. .-+++|.|... ..+.|.|+|.|.+|
T Consensus 23 Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~------~~~~~F~i~~~-~~~~~~~~A~s~~e 95 (106)
T 1btn_A 23 WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYK------KKKHVFKLRLS-DGNEYLFQAKDDEE 95 (106)
T ss_dssp CEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCC------SSSSEEEEECT-TSCEEEEECSSHHH
T ss_pred hhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEccccc------CCccEEEEEec-CCCEEEEECCCHHH
Confidence 5689999999999888754210 011112334566665543322211 23689999753 34689999999999
Q ss_pred HHHHHHHHHHH
Q psy1488 578 KARWLAAFQQE 588 (630)
Q Consensus 578 k~~W~~~L~~a 588 (630)
++.|+.+|..|
T Consensus 96 ~~~Wi~ai~~A 106 (106)
T 1btn_A 96 MNTWIQAISSA 106 (106)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999999864
No 289
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=97.35 E-value=9.4e-05 Score=74.51 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=44.0
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc-CCCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT-RGEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~-~~g~~G~~P~~~v~~~ 233 (630)
..+.|+|||.+. ++++.+||.+++++..+..||..+ .+|..|++|++|+.+.
T Consensus 199 ~~v~al~dy~~~---e~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~ip 251 (283)
T 3pe0_A 199 LPLLAVCDYKQV---EVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLVP 251 (283)
T ss_dssp EEEEECSCEECS---SCEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEECC
T ss_pred ceEEeecCccCC---cccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEeeC
Confidence 679999999874 799999999999999988999998 5889999999999643
No 290
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.30 E-value=0.0024 Score=55.66 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=67.0
Q ss_pred cEEEeeeEEEEe---cC-----cceeEEEEEEeCCeEEEEEeccCCCc-------ee-EEEeEeecCcceeeeCC-CCCC
Q psy1488 484 QLIHQGEVIRVT---SG-----MWTNTITLFLFDHQLVYCKRDILKRN-------TH-VYKARLNIDTSQIINLP-DGKD 546 (630)
Q Consensus 484 ~ll~~G~l~~~~---~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~-------~~-~~k~~i~L~~~~v~~~~-d~~~ 546 (630)
.+.++|.|.+.. .| +..+.++++|=.+.|.+.+-...... .| .-...|+|..+.+.... |..
T Consensus 7 ~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~- 85 (124)
T 3pp2_A 7 TLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKS- 85 (124)
T ss_dssp --CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGC-
T ss_pred cEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccC-
Confidence 355677775431 12 23468999999999998874322110 12 34577888888776543 211
Q ss_pred CCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 547 PHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 547 ~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.-+|+|+|... ....|.|+|.+.+|.+.|+.+|..||+
T Consensus 86 -----krk~vF~l~t~-~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 86 -----SRKNVLELRSR-DGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp -----SSSSEEEEECT-TSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred -----CCceEEEEECC-CCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 23789999764 345799999999999999999999985
No 291
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.29 E-value=0.00042 Score=68.99 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=68.9
Q ss_pred CccEEEeeeEEEEecCcceeEEEEEEeCC-------eEEEEEeccC-CCceeEEEeEeecCcce-eeeCCCCCCCCCCcc
Q psy1488 482 SSQLIHQGEVIRVTSGMWTNTITLFLFDH-------QLVYCKRDIL-KRNTHVYKARLNIDTSQ-IINLPDGKDPHLGVT 552 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~~~~~~~~~fLF~d-------~Ll~~k~~~~-~~~~~~~k~~i~L~~~~-v~~~~d~~~~~~g~~ 552 (630)
....+++|.|.+. +.++.|+++|-++ .|.+-+.... .......++.|+|..+. |....+. .
T Consensus 7 ~~~v~k~G~L~K~---K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~-------~ 76 (264)
T 1qqg_A 7 FSDVRKVGYLRKP---KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADS-------K 76 (264)
T ss_dssp --CEEEEEEEECT---TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCS-------S
T ss_pred CCCccEEEEEEEC---CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCC-------C
Confidence 3567899999764 4456899999999 8888774321 00012457788999876 3333332 2
Q ss_pred cceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q psy1488 553 VRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 553 ~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~ 593 (630)
.+++|.|.+. ++.|.|+|.|.+|++.|+++|..++....
T Consensus 77 ~~~~F~I~t~--~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 77 NKHLVALYTR--DEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp CSSEEEEEES--SCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred CCcEEEEEEC--CEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 3689999864 67899999999999999999999887664
No 292
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=97.25 E-value=0.0015 Score=60.19 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=52.9
Q ss_pred eeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCc--ceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHH
Q psy1488 500 TNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDT--SQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLED 577 (630)
Q Consensus 500 ~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~--~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~e 577 (630)
.+.|+|+|-++.|.|.+.... ..-..++.|+|.. +.+ ++.... ..-+++|.|...+ +.|.|+|.+.+|
T Consensus 29 WkkRwfvL~~~~L~yyk~~~~--~~~~~~g~i~l~~~~~~~-~~~~~~-----~~~~~~F~I~t~~--r~~~l~A~s~~e 98 (168)
T 2j59_M 29 WKQMYVVLRGHSLYLYKDKRE--QTTPSEEEQPISVNACLI-DISYSE-----TKRKNVFRLTTSD--CECLFQAEDRDD 98 (168)
T ss_dssp CEEEEEEEETTEEEEESCTTC--C--------CEECSSCEE-EECSSS-----CSCSSEEEEECSS--CEEEEECSSHHH
T ss_pred ceEEEEEEeCCEEEEEECCcc--cccccCCceEecccceEE-Eecccc-----CCCCCEEEEEeCC--ceEEEEcCCHHH
Confidence 568999999999998875421 1123455666665 332 222111 1236899998654 679999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy1488 578 KARWLAAFQQERAL 591 (630)
Q Consensus 578 k~~W~~~L~~a~~~ 591 (630)
++.|+++|..++..
T Consensus 99 ~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 99 MLAWIKTIQESSNL 112 (168)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988753
No 293
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=96.97 E-value=0.002 Score=67.76 Aligned_cols=101 Identities=22% Similarity=0.358 Sum_probs=70.3
Q ss_pred CccEEEeeeEEEEecC--cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCccee----ee-CCCCCCCCCCcccc
Q psy1488 482 SSQLIHQGEVIRVTSG--MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQI----IN-LPDGKDPHLGVTVR 554 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v----~~-~~d~~~~~~g~~~~ 554 (630)
.+.++++|.|.+.... +..+.|+++|-++.|.+-+.... ...++.|+|..+.. .+ .+... .+...+
T Consensus 266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d----~~~~G~I~L~~~~~~~~v~~~~~~~~---~~~~~~ 338 (386)
T 3lju_X 266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLD----AFARGEVFIGSKESGYTVLHGFPPST---QGHHWP 338 (386)
T ss_dssp SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTC----SBCSEEEECCCGGGTCEEEESCCTTC---CSCCSC
T ss_pred ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCC----cccceEEEeecceeeeeecccCCccc---cccCCC
Confidence 3567899999875432 33578999999999999875422 13357788866542 22 11111 111225
Q ss_pred eeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 555 HAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 555 ~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
++|.|... ++.|.|+|.|++|++.|+.+|+.++..
T Consensus 339 ~~F~I~t~--~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 339 HGITIVTP--DRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp EEEEEECS--SCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred cEEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 88999754 578999999999999999999998864
No 294
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.94 E-value=0.0027 Score=54.79 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=63.1
Q ss_pred EeeeEEEEec-C--c-ceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcce-eeeCCCCCCCCCC-cccceeEEEE
Q psy1488 487 HQGEVIRVTS-G--M-WTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQ-IINLPDGKDPHLG-VTVRHAIKIH 560 (630)
Q Consensus 487 ~~G~l~~~~~-~--~-~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~-v~~~~d~~~~~~g-~~~~~~f~I~ 560 (630)
++|.|.+... + + ..+.++++|=+..|.+-+....+ ........|+|+.+. |..+..++..... ...++.|+|.
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~-~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~ 81 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDK-EQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL 81 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHH-HTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCc-ccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence 4677653111 1 2 35688999989888888743211 011223467776554 2334333222221 2257889997
Q ss_pred ecC----CCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 561 CSD----KDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 561 ~~~----~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
... ..+.+.|.|.|.+|+++|+.+|..++
T Consensus 82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 642 34789999999999999999999775
No 295
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=96.92 E-value=0.0018 Score=56.19 Aligned_cols=100 Identities=11% Similarity=0.178 Sum_probs=64.9
Q ss_pred EEEeeeEEEEec---------CcceeEEEEEEeCCeEEEEEeccCCCc----eeEEEeEeecCcceeeeCCCCCCCCCCc
Q psy1488 485 LIHQGEVIRVTS---------GMWTNTITLFLFDHQLVYCKRDILKRN----THVYKARLNIDTSQIINLPDGKDPHLGV 551 (630)
Q Consensus 485 ll~~G~l~~~~~---------~~~~~~~~~fLF~d~Ll~~k~~~~~~~----~~~~k~~i~L~~~~v~~~~d~~~~~~g~ 551 (630)
..++|.|.+... .+..+.+++.|=.+.|.+-+....... .+.-...|+|..+.+....|..
T Consensus 8 v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~------ 81 (122)
T 1dro_A 8 EGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYT------ 81 (122)
T ss_dssp SSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSS------
T ss_pred eEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCC------
Confidence 347788765421 123568999999999988875421110 0111135677666554333211
Q ss_pred ccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy1488 552 TVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERAL 591 (630)
Q Consensus 552 ~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~ 591 (630)
.-+|+|.|... ..+.|.|+|.|++|.+.|+.+|+.++..
T Consensus 82 kr~~~F~l~t~-~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 82 KKKHVLRVKLA-NGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp SSTTEEEEECS-SSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEEc-CCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 24689999743 3468999999999999999999988753
No 296
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=96.56 E-value=0.0034 Score=67.00 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=46.3
Q ss_pred EEEEEeeccCCCCCCCCCCCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
..|+|+|||.. +|+++.+||.+++++..+..||..+. +|..|.+|+.|+.+.
T Consensus 284 ~~V~alcdy~~---~e~~i~kge~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ip 336 (450)
T 3r6n_A 284 IILRALCDYKQ---DQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIP 336 (450)
T ss_dssp CEEEESSCEEE---TTEEECTTCEEEEEECSSSSEEEEECSSSCCEEEEGGGEECC
T ss_pred ceEEEeccccC---CeeeEecCCEEEEecCCCCCceEEecCCCCeeccceeEEecC
Confidence 56889999994 78999999999999999999999885 689999999999643
No 297
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=96.39 E-value=0.0055 Score=61.66 Aligned_cols=102 Identities=11% Similarity=0.196 Sum_probs=62.7
Q ss_pred EEeeeEEEEecC-cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC-
Q psy1488 486 IHQGEVIRVTSG-MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD- 563 (630)
Q Consensus 486 l~~G~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~- 563 (630)
.++|.|.+...+ +.++.|+|+|-++.|.+.+.......... ...+.+..+.|....+.+. ..+...+++|.|.+..
T Consensus 169 ~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~-i~l~~l~~~~v~~~~~~~~-~~~~~~~~~F~i~~~~~ 246 (291)
T 3tca_A 169 ELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDL-ACFIQFENVNIYYGIQCKM-KYKAPTDHCFVLKHPQI 246 (291)
T ss_dssp CCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCSSTTTC-EEEEEGGGCEEEEECSHHH-HHCCSSSCEEEEECTTC
T ss_pred ceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccccccCc-eeeccceeEEEEecCcccc-ccCCCCCeEEEEEcCCC
Confidence 367888765543 23678999999999888875422221110 1123344444433322110 0112236899997643
Q ss_pred ---CCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 564 ---KDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 564 ---~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
....|.|+|.|++++..|+.+|+.|.
T Consensus 247 ~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 247 QKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp CSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 23568899999999999999998775
No 298
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=96.31 E-value=0.019 Score=56.42 Aligned_cols=102 Identities=15% Similarity=0.227 Sum_probs=69.8
Q ss_pred EEeeeEEEEe-cCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCC
Q psy1488 486 IHQGEVIRVT-SGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDK 564 (630)
Q Consensus 486 l~~G~l~~~~-~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~ 564 (630)
-.+|.|.... ..+..+.||++|=++.|.+.++...+. .-.+...++|+++.|....+.+ ....-.-.++|.|.....
T Consensus 133 ~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk~-~r~l~~~~~L~~~~vy~~~~~k-Kk~kaPt~~~F~ik~~k~ 210 (256)
T 3hk0_A 133 EIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSAA-PRHLQLLADLEDSNIFSLIAGR-KQYNAPTDHGLCIKPNKV 210 (256)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCCC-GGGEEEEECCTTEEEEEESSTH-HHHCCSSSEEEEEEETTC
T ss_pred cceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCCc-cccceEEEEcCCCEEEEecccc-cccCCCCCCEEEEEcccc
Confidence 3677776543 234467999999999998888653222 2233444689998887655432 111223368888876432
Q ss_pred ----CeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 565 ----DKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 565 ----~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
...+.|+|.+++++..|+.+|..|+
T Consensus 211 ~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 211 RNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp SSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 3468899999999999999999886
No 299
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=96.13 E-value=0.15 Score=45.35 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=68.2
Q ss_pred CCccEEEeeeEEEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 481 TSSQLIHQGEVIRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 481 ~~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
++-.+|++|.|.+. .|...+.|.++|-+.-.++.-- ......|+.||++...-+++.. ...|.|.
T Consensus 48 ~ge~Ilk~G~v~Kr-kGl~~kkR~liLT~~PrL~Yvd----p~~~~~KGeIpls~~l~ve~k~----------~~~F~I~ 112 (151)
T 1w1g_A 48 ENNLILKMGPVDKR-KGLFARRRQLLLTEGPHLYYVD----PVNKVLKGEIPWSQELRPEAKN----------FKTFFVH 112 (151)
T ss_dssp TTCCEEEEEEEEEE-ETTEEEEEEEEEETTTEEEEEE----TTTTEEEEEECCCTTCEEEESS----------SSEEEEE
T ss_pred CCCcEEEEEEEEec-ccCcceeEEEEEcCCceEEEEc----CccccccceEecCCCeeEEEcC----------CCEEEEE
Confidence 56678999998764 4555678999998776554432 1245889999999743222221 2478886
Q ss_pred ecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhh
Q psy1488 561 CSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQ 594 (630)
Q Consensus 561 ~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~ 594 (630)
+. ++.|.|.+. ....+.|+++|+.++...-.
T Consensus 113 Tp--~RtY~~~d~-~~~AqeWv~aI~~~~~~~~~ 143 (151)
T 1w1g_A 113 TP--NRTYYLMDP-SGNAHKWCRKIQEVWRQRYQ 143 (151)
T ss_dssp ET--TEEEEEECT-TSCHHHHHHHHHHHHHHHHC
T ss_pred CC--CceEEEEcC-ccCHHHHHHHHHHHHHHHhc
Confidence 64 488999776 88899999999999987543
No 300
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.89 E-value=0.1 Score=44.79 Aligned_cols=99 Identities=11% Similarity=0.155 Sum_probs=60.3
Q ss_pred cEEEeeeEEEEec---CcceeEEEEEEeCCe------EEEEEe-ccCCCceeEEEeEeecCcceeeeCCCCCCCCCCccc
Q psy1488 484 QLIHQGEVIRVTS---GMWTNTITLFLFDHQ------LVYCKR-DILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTV 553 (630)
Q Consensus 484 ~ll~~G~l~~~~~---~~~~~~~~~fLF~d~------Ll~~k~-~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~ 553 (630)
..+++|.|+.... +++++.++++||.+- |-+-.- ...+ ..-.-+..|.|.+|.=+...+++.... ..
T Consensus 11 ~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~-r~~~~rrVIrLsdCisV~~~~~e~~~p--k~ 87 (127)
T 2d9w_A 11 GAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPR-RCEAARKVIRLSDCLRVAEAGGEASSP--RD 87 (127)
T ss_dssp CSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSS-SCSCCEEEECGGGEEEEEECCSCSSSC--SS
T ss_pred ccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccc-cCCCCceEEEhhhCCeEecccCccCCC--Cc
Confidence 4578888876542 344678899998763 112221 1111 112345788898886333333221111 23
Q ss_pred ceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHH
Q psy1488 554 RHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQE 588 (630)
Q Consensus 554 ~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a 588 (630)
.++|.|.+ ++++|+|.|.+. |++.|+++|.+.
T Consensus 88 ~~aF~l~T--~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 88 TSAFFLET--KERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp CEEEEEEE--SSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred ceEEEEEe--CCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 47888876 567899999964 899999999764
No 301
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=95.65 E-value=0.025 Score=56.24 Aligned_cols=101 Identities=10% Similarity=0.163 Sum_probs=63.9
Q ss_pred EeeeEEEEec-CcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC--
Q psy1488 487 HQGEVIRVTS-GMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD-- 563 (630)
Q Consensus 487 ~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~-- 563 (630)
.+|.|..... .+..+.|||+|=.+.|.+.++...+ ..--+...++|+++.|....+.+ ....-.-.++|.|....
T Consensus 160 ~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk-~~r~l~~l~~L~~~~VY~~~~~k-kk~kaPt~~~F~ik~~~~~ 237 (281)
T 4gmv_A 160 IEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAK-VSRDLVCFLQLDHVNVYYGQDYR-NKYKAPTDYCLVLKHPQIQ 237 (281)
T ss_dssp CEEEEEEECTTSSCEEEEEEEECSSCEEEC----------CCEEEECGGGCEEEEESSHH-HHTCCSCSCEEEEECTTCC
T ss_pred cEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCC-ccccceEEEEcCCcEEEEecccc-cccCCCCCcEEEEecCccC
Confidence 5677765432 2446799999999999888764322 12222344578888887654221 00112336889887632
Q ss_pred --CCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 564 --KDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 564 --~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
....+.|+|.+++++..|+.+|.-|+
T Consensus 238 ~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 238 KKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp SCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 34578999999999999999999876
No 302
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=95.30 E-value=0.058 Score=56.53 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=66.2
Q ss_pred EEeeeEEEEecC-cceeEEEEEE--eCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe-
Q psy1488 486 IHQGEVIRVTSG-MWTNTITLFL--FDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC- 561 (630)
Q Consensus 486 l~~G~l~~~~~~-~~~~~~~~fL--F~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~- 561 (630)
+++|.|.+.... +..+.|+++| =++.|.+-+.. ..-..++.|.|..+.+...++.. ..+++|.|.+
T Consensus 147 ~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~----~~~~p~g~I~L~~~~~~~~~~~~------~~~~~f~I~~~ 216 (386)
T 3lju_X 147 YREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRN----DAKEPKAVMKIEHLNATFQPAKI------GHPHGLQVTYL 216 (386)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEECHHHH------TSTTCEEEEEE
T ss_pred ccccceeeeccccCCceEEEEEEEcCCCEEEEECCC----CccCcccEEEeeccEEEEccccc------CCCceEEEEEe
Confidence 689998876533 2356889888 57788777653 22344678899988765532111 1357788763
Q ss_pred -cCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 562 -SDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 562 -~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
.+..+.|.|+|.|.++...|+++|+.+....
T Consensus 217 ~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~~ 248 (386)
T 3lju_X 217 KDNSTRNIFIYHEDGKEIVDWFNALRAARFHY 248 (386)
T ss_dssp ETTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEcCCHHHHHHHHHhhhhccccc
Confidence 3455789999999999999999999886544
No 303
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.63 E-value=0.08 Score=46.25 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=50.8
Q ss_pred eEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecC--CCeEEEEEeCCHHHH
Q psy1488 501 NTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSD--KDKWLLFCCRSLEDK 578 (630)
Q Consensus 501 ~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~--~~~~~~l~a~s~~ek 578 (630)
+.+++.|=++.|.+-|.+... .-.-.+.|.|..|.|...+.. ...+++|+|.... ..+.|.|.|.|+++.
T Consensus 29 KrrWFvlk~~~L~YyK~kee~--~~ePig~I~L~gceV~pd~~~------~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy 100 (137)
T 2ys3_A 29 RQHWVVFKETTLSYYKSQDEA--PGDPIQQLNLKGCEVVPDVNV------SGQKFCIKLLVPSPEGMSEIYLRCQDEQQY 100 (137)
T ss_dssp CCCEEEECSSCEEEESSTTTT--TSCCSCCBCTTTCEEEECCBG------GGTBEEEEEEEECSSSEEEEEEEESSHHHH
T ss_pred eeEEEEEeCCEEEEECCchhc--cCCCceEEECCCCEEeccccc------cCCceEEEEEccCCCCceEEEEECCCHHHH
Confidence 356644445555555443211 012345678999987654321 1346777776532 347899999999999
Q ss_pred HHHHHHHHHHH
Q psy1488 579 ARWLAAFQQER 589 (630)
Q Consensus 579 ~~W~~~L~~a~ 589 (630)
++||.++..|-
T Consensus 101 ~~WMaA~rlAs 111 (137)
T 2ys3_A 101 ARWMAGCRLAS 111 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998665
No 304
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=94.24 E-value=0.11 Score=45.50 Aligned_cols=103 Identities=14% Similarity=0.148 Sum_probs=61.4
Q ss_pred EeeeE-EEEecCcceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCC------CCcccceeEEE
Q psy1488 487 HQGEV-IRVTSGMWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPH------LGVTVRHAIKI 559 (630)
Q Consensus 487 ~~G~l-~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~------~g~~~~~~f~I 559 (630)
..|.. .++..+.+.+.+++.|-+|..++-..... ...-..+..|+++.+.-+. .|.... .......+|.|
T Consensus 14 ~~Gt~l~K~~~~~~~k~r~f~l~~~~~~~w~~s~~-~~~~~~~~~i~i~~I~eIr--~G~~s~~~~~~~~~~~~~~~FsI 90 (131)
T 1mai_A 14 LKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESRK-VMRSPESQLFSIEDIQEVR--MGHRTEGLEKFARDIPEDRCFSI 90 (131)
T ss_dssp HHCEEEEEESSSSCEEEEEEEECTTSSEEEECCCC-TTCCTTTTEEEGGGEEEEE--ESSCSHHHHHHCTTSCGGGEEEE
T ss_pred HcCCeEEEECCCCcceeEEEEECCCCCEEEeCCcC-CCCCCcCcEEEHhhhHHHH--CCCCCHHHHhhhhcCCccceEEE
Confidence 34443 44554554567777888887666552100 0001123556777664322 222100 01234689999
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
...+..+.+.|.|.|.++.+.|+..|...+...
T Consensus 91 iy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 91 VFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp EESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred EECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 987766789999999999999999998777554
No 305
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=94.09 E-value=0.059 Score=53.49 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=60.0
Q ss_pred eeEEEEEEeCCeEEEEEeccCCCc--eeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHH
Q psy1488 500 TNTITLFLFDHQLVYCKRDILKRN--THVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLED 577 (630)
Q Consensus 500 ~~~~~~fLF~d~Ll~~k~~~~~~~--~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~e 577 (630)
++.++|.|=.+.|+|-+....... ...-...|+|..+.+....+.. .-+|+|+|... ....|.|+|.+.+|
T Consensus 39 Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~------kKk~vF~L~t~-~g~~yLFQA~s~eE 111 (279)
T 3a8n_A 39 WKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHP------KKDFVFCLSNS-LGDAFLFQTTSQTE 111 (279)
T ss_dssp CEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSS------SSCSCCCEEET-TTEEEECCCSCHHH
T ss_pred CeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccccC------CCCcEEEEEcC-CCCEEEEeCCCHHH
Confidence 568999999999988875422111 1223456888888776333321 13678999764 45679999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy1488 578 KARWLAAFQQERALV 592 (630)
Q Consensus 578 k~~W~~~L~~a~~~~ 592 (630)
.+.|+.+|..++...
T Consensus 112 m~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 112 LENWITAIHSACAAA 126 (279)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998753
No 306
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=93.97 E-value=0.16 Score=54.06 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=61.6
Q ss_pred cEEEeeeEEEEecC-cceeEEEEEEe-CCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 484 QLIHQGEVIRVTSG-MWTNTITLFLF-DHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 484 ~ll~~G~l~~~~~~-~~~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
.++++|.|.+.... +.++.|+++|- ++.|++-|.+. .-..++.|+|..+.+....... .....+++|.|.+
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~----~~~~~~~i~l~~~~~~~~~~~~---~~~~~~~~f~I~~ 77 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMK---TERPRPNTFIIRC 77 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------CCCGGGBCTTCEEEE---ECSSSTTEEEEEE
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCC----CCCccCcccccCccccceeecC---CCCCCCceeEEEc
Confidence 57899999876532 23578899887 67777776442 1233466777775542110000 0011257899876
Q ss_pred cCCCeE--EEEEeCCHHHHHHHHHHHHHHHHHH
Q psy1488 562 SDKDKW--LLFCCRSLEDKARWLAAFQQERALV 592 (630)
Q Consensus 562 ~~~~~~--~~l~a~s~~ek~~W~~~L~~a~~~~ 592 (630)
...... ..|.+.+++++..|+.+|+.++...
T Consensus 78 ~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 78 LQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp EETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred CCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 543322 2689999999999999999987543
No 307
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.61 E-value=1.5 Score=37.56 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=60.2
Q ss_pred CccEEEeeeEEEEecCcceeEEEEE-EeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 482 SSQLIHQGEVIRVTSGMWTNTITLF-LFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~~~~~~~~~f-LF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
+...|++|.++-.........||.+ |=...|.+-+-. ... .|-..|||..+.-+..............+|+|+|.
T Consensus 5 ~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e---~~~-k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~ 80 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNE---SGS-KYYKEIPLSEILRISSPRDFTNISQGSNPHCFEII 80 (129)
T ss_dssp CTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCS---SCC-SCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecC---CCC-ceeceeeHHHhcccccccCccccCCCCCCceEEEE
Confidence 4567889998766544433344444 444445555432 112 22334899987655544433322233456999997
Q ss_pred ecCCCeEEEEEeC---------------CHHHHHHHHHHHHHHHH
Q psy1488 561 CSDKDKWLLFCCR---------------SLEDKARWLAAFQQERA 590 (630)
Q Consensus 561 ~~~~~~~~~l~a~---------------s~~ek~~W~~~L~~a~~ 590 (630)
. ....|.+... ..+.-..|..+|++|..
T Consensus 81 T--~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 81 T--DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp C--SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred E--CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 5 3445555432 16889999999998873
No 308
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=88.78 E-value=4.9 Score=35.72 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=51.5
Q ss_pred EEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeee-CCCCCCCCCCcccceeEEEEecC--CCeEEEEEeCCHHHH
Q psy1488 502 TITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIIN-LPDGKDPHLGVTVRHAIKIHCSD--KDKWLLFCCRSLEDK 578 (630)
Q Consensus 502 ~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~-~~d~~~~~~g~~~~~~f~I~~~~--~~~~~~l~a~s~~ek 578 (630)
.++-|.|.|.-|..-+.... ....-...|.|..|.|.. +.-. .-++.|++.... ....+.|.|.++++.
T Consensus 46 KryWfv~kDt~LsyYKSkEe-~~geP~~~inLrGCEVtPDVnva-------~~Kf~ikL~ip~~~gm~e~~LrcdsE~QY 117 (165)
T 4bbk_A 46 KQYWFVFKDTSIAYFKNKEL-EQGEPIEKLNLRGCEIVPDVNVS-------GRKFGIKLLIPVADGMNEVYLRCDHEDQY 117 (165)
T ss_dssp EEEEEEEETTEEEEESSGGG-TTSCCSEEEECTTCEEEEEEETT-------TTEEEEEEEEEETTEEEEEEEEESSHHHH
T ss_pred eeEEEEEeCCEEEEEcCHHH-hcCCCceEEecCccEEecccccc-------cceeeEEEecCCCCcceeeeeecCCHHHH
Confidence 45677787776655443221 112344667899999873 2211 125666664432 234678899999999
Q ss_pred HHHHHHHHHHHH
Q psy1488 579 ARWLAAFQQERA 590 (630)
Q Consensus 579 ~~W~~~L~~a~~ 590 (630)
.+||.++.-|.+
T Consensus 118 a~WMAAcrLAsk 129 (165)
T 4bbk_A 118 ARWMAACILASK 129 (165)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHhhhccc
Confidence 999999987665
No 309
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=88.38 E-value=1.4 Score=40.31 Aligned_cols=56 Identities=11% Similarity=0.195 Sum_probs=45.2
Q ss_pred eEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 529 ARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 529 ~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
..|||..+.|..---+.| .-.++|+|...+.....+|.|.+..+-..|+++|+.++
T Consensus 121 ~~IPLkMayvtR~~~~tD-----~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTD-----PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EEEETTTCEEEEECCSSC-----CSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eeecHHHHHHHHhccCCC-----CCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 457888887776444333 23689999998888899999999999999999999876
No 310
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=87.57 E-value=5.3 Score=36.04 Aligned_cols=83 Identities=6% Similarity=-0.034 Sum_probs=63.4
Q ss_pred eeEEEEEEeCC-----eEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEeCC
Q psy1488 500 TNTITLFLFDH-----QLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCCRS 574 (630)
Q Consensus 500 ~~~~~~fLF~d-----~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a~s 574 (630)
++.+++.|--. .+.+.|.+....+.|.....++|..+..++..+.. ...|.|.. ++.|-.+|.+
T Consensus 64 KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~--------~~gF~ltl---~K~Y~W~a~s 132 (171)
T 3hie_A 64 KKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEI--------SEGFILTM---SKKYYWETNS 132 (171)
T ss_dssp EEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSC--------TTEEEEES---SSEEEEECSS
T ss_pred ccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCC--------CCcEEEEe---CCeEEEecCC
Confidence 56788777544 36777777666788999999999999987764421 35677765 3578899999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy1488 575 LEDKARWLAAFQQERALVE 593 (630)
Q Consensus 575 ~~ek~~W~~~L~~a~~~~~ 593 (630)
..||+.|+..|-+....+.
T Consensus 133 ~~Er~~FI~sL~K~y~ky~ 151 (171)
T 3hie_A 133 AKERTVFIKSLITLYIQTF 151 (171)
T ss_dssp HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999999999988777653
No 311
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=87.20 E-value=2.1 Score=38.47 Aligned_cols=82 Identities=12% Similarity=0.191 Sum_probs=50.0
Q ss_pred EEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEec--CCCeEEEEEeCCHHHHH
Q psy1488 502 TITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCS--DKDKWLLFCCRSLEDKA 579 (630)
Q Consensus 502 ~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~--~~~~~~~l~a~s~~ek~ 579 (630)
.++-|.|.|..|..-+..... .-.-.+.|.|..|.|..-..-. ..+++|++... .....+.|.|.++++..
T Consensus 67 KryWFv~kd~~LsyYKskEe~-~geP~~~I~LrGCEVtpDVnva------~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya 139 (173)
T 4f7h_A 67 KQYWCTFKDTSISCYKSKEES-SGTPAHQMNLRGCEVTPDVNIS------GQKFNIKLLIPVAEGMNEIWLRCDNEKQYA 139 (173)
T ss_dssp EEEEEEEETTEEEEESCGGGC-SSCCSEEEECTTCEEEEEEETT------TTEEEEEEEEEETTEEEEEEEEESSHHHHH
T ss_pred eeEEEEEeCCEEEEEcCHhHh-cCCCceEEecCceEEecccccc------ccceeEEEeccCCCCcceeeeecCCHHHHH
Confidence 456677766665554332211 1233566789999987321111 12455665443 23456888999999999
Q ss_pred HHHHHHHHHHH
Q psy1488 580 RWLAAFQQERA 590 (630)
Q Consensus 580 ~W~~~L~~a~~ 590 (630)
+||.++.-|.+
T Consensus 140 ~WMAAcrLAsk 150 (173)
T 4f7h_A 140 HWMAACRLASK 150 (173)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHhhhhcc
Confidence 99999976643
No 312
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=86.69 E-value=5.6 Score=38.99 Aligned_cols=85 Identities=6% Similarity=-0.049 Sum_probs=64.9
Q ss_pred cceeEEEEEEeCCe-----EEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEecCCCeEEEEEe
Q psy1488 498 MWTNTITLFLFDHQ-----LVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHCSDKDKWLLFCC 572 (630)
Q Consensus 498 ~~~~~~~~fLF~d~-----Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~~~~~~~~~l~a 572 (630)
..++.++++|--.. +.++|.+......|.....++|+++..++..-+. ...|.|.. ++.|...|
T Consensus 132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~~~--------~~gF~LTl---~K~YyW~A 200 (320)
T 3a58_A 132 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEI--------SEGFILTM---SKKYYWET 200 (320)
T ss_dssp GGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECSSC--------TTEEEEES---SSEEEEEE
T ss_pred cccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcccCC--------CCceEEEe---CCceEEec
Confidence 44678888876655 7788877666788999999999999877621111 24577755 45688899
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q psy1488 573 RSLEDKARWLAAFQQERALVE 593 (630)
Q Consensus 573 ~s~~ek~~W~~~L~~a~~~~~ 593 (630)
.+..||+.|+..|-+....+.
T Consensus 201 ~s~kER~~FI~sLvKiy~KYt 221 (320)
T 3a58_A 201 NSAKERTVFIKSLITLYIQTF 221 (320)
T ss_dssp SSHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHc
Confidence 999999999999998887775
No 313
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.31 E-value=4 Score=34.85 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=57.3
Q ss_pred CccEEEeeeEEEEecCcceeEEEEEEeCCe-EEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEE
Q psy1488 482 SSQLIHQGEVIRVTSGMWTNTITLFLFDHQ-LVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIH 560 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~~~~~~~~~fLF~d~-Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~ 560 (630)
+...|++|.++..........||.+-.+.- |.+-+-. ..+ .|-..|||..+.-+...............|+|+|.
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e--~~~--~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~ 80 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNN--TTN--RYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV 80 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSS--SCS--SCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecC--CCC--ceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence 456778888775544433335666655554 4444432 112 22234899987655544433211122356999997
Q ss_pred ecCCCeEEEEEeC-----------CHHHHHHHHHHHHHHH
Q psy1488 561 CSDKDKWLLFCCR-----------SLEDKARWLAAFQQER 589 (630)
Q Consensus 561 ~~~~~~~~~l~a~-----------s~~ek~~W~~~L~~a~ 589 (630)
.. ...|.+... ..+....|..+|.+|.
T Consensus 81 T~--~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 81 TA--NATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp CS--SCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred eC--CeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 64 233444331 2366888999998875
No 314
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A
Probab=86.14 E-value=0.3 Score=38.18 Aligned_cols=37 Identities=3% Similarity=0.162 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 196 GFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 196 ~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
.+.+|+.|.|++.. ++|++.+.+|..||+...|+...
T Consensus 28 ~l~~G~~v~vl~~~-~~W~kV~~~g~~GwV~~~yl~~~ 64 (76)
T 2kt8_A 28 SLSGNTKVTIVGEE-GAFYKIEYKGSHGYVAKEYIKDI 64 (76)
T ss_dssp EECTTCEEEEEEEE-TTEEEEEETTEEEEEEGGGEEEE
T ss_pred EECCCCEEEEEEEe-CCEEEEEECCEEEEEEhHHhCcC
Confidence 36689999999864 68999999999999999999754
No 315
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}
Probab=85.75 E-value=0.25 Score=38.46 Aligned_cols=36 Identities=14% Similarity=0.441 Sum_probs=31.0
Q ss_pred CCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 197 FRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 197 f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
+.+|+.+.|++.. ++|++.+.+|..||+...|+...
T Consensus 27 l~~G~~v~v~~~~-~~W~kV~~~g~~GwV~~~yl~~~ 62 (74)
T 2krs_A 27 LRNNDKVEIIKEV-DGWYEIRFNGKVGYASKSYITIV 62 (74)
T ss_dssp EETTCEEEEEEEE-TTEEEEEETTEEEEECSSSEEES
T ss_pred ECCCCEEEEEEEe-CCEEEEEECCeEEEEEhHHcCCC
Confidence 6689999999874 68999998899999999999643
No 316
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=84.86 E-value=2.6 Score=41.29 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=33.2
Q ss_pred ceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHH
Q psy1488 554 RHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQER 589 (630)
Q Consensus 554 ~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~ 589 (630)
.++|+|...+....++|.|.+.++-+.|+++|+.++
T Consensus 226 ~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 226 PRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp SCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 689999998778889999999999999999999886
No 317
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}
Probab=83.48 E-value=0.14 Score=39.45 Aligned_cols=37 Identities=11% Similarity=0.331 Sum_probs=30.7
Q ss_pred CCCCCCEEEEEEecCCCcccccCCCccccccccchhhc
Q psy1488 196 GFRAGDVIEVLDTLDRDWWWGTRGEASGWFPSAFVRLR 233 (630)
Q Consensus 196 ~f~~gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~~v~~~ 233 (630)
.+.+|+.+.|++. .++|++.+.+|..||+...|+...
T Consensus 27 ~l~~G~~v~v~~~-~~~W~~V~~~G~~GwV~~~~l~~~ 63 (70)
T 2kq8_A 27 ALPQGQKVQVISE-NSGWSKINYNGQTGYIGTRYLSKL 63 (70)
T ss_dssp CCCSSSSCCCCEE-ETTEEEEEETTEEEEEETTSCSCC
T ss_pred EECCCCEEEEEEe-cCCEEEEEECCEEEEEEhHHccch
Confidence 3678888888876 468999999999999999998643
No 318
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=83.30 E-value=40 Score=38.13 Aligned_cols=92 Identities=21% Similarity=0.355 Sum_probs=62.1
Q ss_pred EEEeeeEEEEecCc---ceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEEEe
Q psy1488 485 LIHQGEVIRVTSGM---WTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKIHC 561 (630)
Q Consensus 485 ll~~G~l~~~~~~~---~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I~~ 561 (630)
.++.|.+.....+. ..++++++|-.+-|-.-|-.-.+. .+..++|+.+.+.+..++-. +.++.|.|..
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 610 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE----KKYMLSVDNLKLRDVEKGFM-----SSKHIFALFN 610 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC----EEEEEECTTEEEEEC------------CEEEEEEE
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc----ccccccccccccchhhhccc-----cccccccccC
Confidence 77888886532221 246888889888887766432223 34567889999988876532 4578888877
Q ss_pred cCCC------eEEEEEeCCHHHHHHHHHHH
Q psy1488 562 SDKD------KWLLFCCRSLEDKARWLAAF 585 (630)
Q Consensus 562 ~~~~------~~~~l~a~s~~ek~~W~~~L 585 (630)
.... +.+.|.|.+.++.+.|...+
T Consensus 611 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 611 TEQRNVYKDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp TTSSCSBTTBSEEEEEESSHHHHHHHHHHH
T ss_pred CccccccchhhhhhhhccccccchhhHHhh
Confidence 5433 57899999999999999998
No 319
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=82.15 E-value=0.7 Score=36.00 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=19.7
Q ss_pred EEEEEeeccCCCCCCCCCCCCC
Q psy1488 179 VLAEAVWDHVAMEAEELGFRAG 200 (630)
Q Consensus 179 ~~~~aly~~~~~~~~eL~f~~g 200 (630)
..++|+|||.++.++||+|.+.
T Consensus 53 ~~~~alydy~a~~~dElsf~~~ 74 (77)
T 2jmc_A 53 ELVLALYDYQESGDNAPSYSPP 74 (77)
T ss_dssp CEEEESSCCCCSSCCCCCSCCC
T ss_pred ceEEECCCcCCCCCCccccCCC
Confidence 4688999999999999999864
No 320
>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1
Probab=72.24 E-value=3.9 Score=30.78 Aligned_cols=46 Identities=24% Similarity=0.448 Sum_probs=36.1
Q ss_pred EeeccCCCCCCCCCCCCCCEEEEEEecCCCccccc------CCCcccccccc
Q psy1488 183 AVWDHVAMEAEELGFRAGDVIEVLDTLDRDWWWGT------RGEASGWFPSA 228 (630)
Q Consensus 183 aly~~~~~~~~eL~f~~gd~i~vl~~~~~~Ww~g~------~~g~~G~~P~~ 228 (630)
..-||.|..++|++...|+++.|+.....+....- .....||+|-.
T Consensus 12 V~~dY~A~ke~eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~ 63 (74)
T 1wfw_A 12 VIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGS 63 (74)
T ss_dssp CCSCBCCCSSSCCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGG
T ss_pred EEeeeeeeccceeccccCcEEEEEEecCcceEEEEeecCCCCccccCccccc
Confidence 46899999999999999999999988766554432 23478999864
No 321
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=71.26 E-value=1.3 Score=38.13 Aligned_cols=29 Identities=24% Similarity=0.555 Sum_probs=22.2
Q ss_pred CCCCCCCEEEEEEecCC----CcccccCCCccc
Q psy1488 195 LGFRAGDVIEVLDTLDR----DWWWGTRGEASG 223 (630)
Q Consensus 195 L~f~~gd~i~vl~~~~~----~Ww~g~~~g~~G 223 (630)
..|..||.|.|..+.++ |||.|++....|
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg 91 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMKG 91 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEEEEEEEEEET
T ss_pred cCCCCCCEEEEEecCCCCCcCccEEEEEEEeeC
Confidence 46899999999998766 899999765555
No 322
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=64.29 E-value=9.4 Score=35.95 Aligned_cols=94 Identities=15% Similarity=0.134 Sum_probs=51.8
Q ss_pred EEeeeEEEEecCcceeEEEEEEe-----CCeEEEEEecc--CCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEE
Q psy1488 486 IHQGEVIRVTSGMWTNTITLFLF-----DHQLVYCKRDI--LKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIK 558 (630)
Q Consensus 486 l~~G~l~~~~~~~~~~~~~~fLF-----~d~Ll~~k~~~--~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~ 558 (630)
+.+|.+.. -.+++.+.++++|- .|++.+.--+. .+.+.-.-|..+.|.++. .++.+-. -....+++.
T Consensus 10 v~eg~vk~-r~~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~--GlE~g~~---ldk~s~TlA 83 (224)
T 3ml4_A 10 LVEGQVKL-RDGKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDIC--GLEPALP---YEGLAHTLA 83 (224)
T ss_dssp SEEEEEEE-C---CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEE--EEEEEEE---ETTEEEEEE
T ss_pred eEEEeeee-ecCCceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhc--Ccccccc---ccCcccEEE
Confidence 45687754 44555678999984 46655554321 111112223334444332 1110000 002367888
Q ss_pred EEecCCCeEEEEEeCCHHHHHHHHHHHHH
Q psy1488 559 IHCSDKDKWLLFCCRSLEDKARWLAAFQQ 587 (630)
Q Consensus 559 I~~~~~~~~~~l~a~s~~ek~~W~~~L~~ 587 (630)
|.+. +..++|.|.+.++...|...|..
T Consensus 84 IIc~--d~~~vLAFds~e~l~~W~~~l~~ 110 (224)
T 3ml4_A 84 IICL--SQAVMLGFDSHEAMCAWDTRIRY 110 (224)
T ss_dssp EEES--SCEEEEECSSHHHHHHHHHHHHH
T ss_pred EEec--CcEEEEEeCCHHHHHHHHHHHhh
Confidence 8884 44679999999999999999876
No 323
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=59.25 E-value=2.6 Score=34.40 Aligned_cols=16 Identities=38% Similarity=0.866 Sum_probs=13.9
Q ss_pred CCccccccccchhhcc
Q psy1488 219 GEASGWFPSAFVRLRV 234 (630)
Q Consensus 219 ~g~~G~~P~~~v~~~~ 234 (630)
+|+.||||.+||+.+.
T Consensus 6 ~g~~G~fP~~~v~~~~ 21 (98)
T 1udl_A 6 SGQKGWFPASHVKLLG 21 (98)
T ss_dssp SSCCSSCCCCCCCCCS
T ss_pred CCCEeEEEhhhEEEcC
Confidence 5799999999998764
No 324
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=53.96 E-value=15 Score=34.82 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=26.8
Q ss_pred ceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHH
Q psy1488 554 RHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQ 587 (630)
Q Consensus 554 ~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~ 587 (630)
++.|.|.. .++.|.|+|.+++|+..|+.+|++
T Consensus 195 ~~~f~iit--~~r~~~~~a~s~~e~~~Wi~~lq~ 226 (228)
T 3tfm_A 195 PNSFVIIT--ANRVLHCNADTPEEMHHWITLLQR 226 (228)
T ss_dssp TTEEEEEE--TTEEEEEECSSHHHHHHHHHHHCS
T ss_pred CCcEEEEe--CCceEEEEcCCHHHHHHHHHHHhh
Confidence 56777755 467899999999999999999875
No 325
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=50.98 E-value=14 Score=31.82 Aligned_cols=36 Identities=11% Similarity=0.142 Sum_probs=28.0
Q ss_pred ceeEEEEecCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Q psy1488 554 RHAIKIHCSDKDKWLLFCCRSLEDKARWLAAFQQERA 590 (630)
Q Consensus 554 ~~~f~I~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~ 590 (630)
.|.|.|...+ ...|+|.+.++.+++.|+..|+.+..
T Consensus 95 ~nTFVlK~~n-~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 95 DNTFVLKVEN-GAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp TTEECCBCTT-SCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cceEEEEecC-CcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 4667665432 33699999999999999999988764
No 326
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=46.65 E-value=7.5 Score=38.87 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=30.1
Q ss_pred CCCCCEEEEEEecCCCcccccC-CCccccccccchhhc
Q psy1488 197 FRAGDVIEVLDTLDRDWWWGTR-GEASGWFPSAFVRLR 233 (630)
Q Consensus 197 f~~gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~~v~~~ 233 (630)
+..|+.|.|+++ + +|++.+. +|..||++..++...
T Consensus 37 l~~G~~v~Vl~~-~-gW~~V~~~dG~~GwV~~~~l~~~ 72 (306)
T 3npf_A 37 ALLGMPVKVLQY-N-GWYEIQTPDDYTGWVHRMVITPM 72 (306)
T ss_dssp EETTCEEEEEEE-S-SEEEEECTTSCEEEEEGGGEEEE
T ss_pred EcCCCEEEEEEE-C-CEEEEEcCCCCEEEEEhHHeeec
Confidence 678999999987 4 6999987 899999999998654
No 327
>1m3w_A H10H24; four-helix bundle, heme binding, maquette, heme binding protein, electron transport, de novo protein; 2.80A {Synthetic} SCOP: k.8.1.1
Probab=43.15 E-value=21 Score=21.38 Aligned_cols=18 Identities=28% Similarity=0.529 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHhhh
Q psy1488 319 EDILAFQSSFLEDLETKL 336 (630)
Q Consensus 319 ~~I~~~h~~ll~~L~~~~ 336 (630)
-+|+.+|..||+.+++.+
T Consensus 4 geiwklheeflkkfeell 21 (32)
T 1m3w_A 4 GEIWKLHEEFLKKFEELL 21 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 468888888888887765
No 328
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=38.87 E-value=4.4 Score=43.20 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=18.2
Q ss_pred ecCCCcccccC--CCccccccccchhh
Q psy1488 208 TLDRDWWWGTR--GEASGWFPSAFVRL 232 (630)
Q Consensus 208 ~~~~~Ww~g~~--~g~~G~~P~~~v~~ 232 (630)
..+++||+++. .|++|++|+|||..
T Consensus 14 ~~~~~ww~~~~~~~~~~g~~P~~~v~~ 40 (463)
T 3cxl_A 14 LYFQGVWKSYLYQLQQEAPHPRRITCT 40 (463)
T ss_dssp ----CCSCCHHHHHHHHSCCCEECCCC
T ss_pred CCCCCEEEEEecCcCccCCCCcCccCC
Confidence 45689999985 56899999999964
No 329
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=33.00 E-value=0.067 Score=53.75 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=30.1
Q ss_pred EEEEeeccCCCCCCCCCCCCCCEEEE---EEecCCCccc
Q psy1488 180 LAEAVWDHVAMEAEELGFRAGDVIEV---LDTLDRDWWW 215 (630)
Q Consensus 180 ~~~aly~~~~~~~~eL~f~~gd~i~v---l~~~~~~Ww~ 215 (630)
++.|||+|.+...+||+|++||+..| +...+++||+
T Consensus 105 rl~aL~~~~~~~~~eLsf~kgd~~~ier~ln~~~pdw~~ 143 (302)
T 2y3a_B 105 RIAEIHESRTKLEQDLRAQASDNREIDKRMNSLKPDLMQ 143 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHhhhhcchhhhhhhhhHHHhHHhhhccCChHHHH
Confidence 46799999999999999999999999 5555666664
No 330
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=31.48 E-value=3.6e+02 Score=27.77 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCCHHHH
Q psy1488 273 VVRELINTERDFVKVLHDVSEGYLAECRRRNDMFSPEQI 311 (630)
Q Consensus 273 ii~ELl~TE~~Yv~~L~~l~~~y~~~l~~~~~~l~~~~~ 311 (630)
++.|+-.-|..-+..|..|.++|=.........++.++.
T Consensus 195 ll~el~~le~elA~~L~SLT~HyDqC~~l~~~~~s~~e~ 233 (413)
T 4hpq_C 195 FTNEADQLEQELADFLKSFTDHFDKCSALSSRSVSPEDA 233 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCSSHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChHhH
Confidence 789999999999999999999996655433444555533
No 331
>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}
Probab=29.17 E-value=18 Score=36.12 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=27.9
Q ss_pred CCCCEEEEEEecCCCcccccC---------CCccccccccchh
Q psy1488 198 RAGDVIEVLDTLDRDWWWGTR---------GEASGWFPSAFVR 231 (630)
Q Consensus 198 ~~gd~i~vl~~~~~~Ww~g~~---------~g~~G~~P~~~v~ 231 (630)
..|+.|.|+++ +++|.+.+. +|..||++..++.
T Consensus 65 l~Ge~V~Vl~~-~~~W~~V~~~~q~~~~~~dGy~GWV~~~~L~ 106 (311)
T 3h41_A 65 LLGQEVTVVDK-KGDWVKVLVHGQPTPRNEEGYPGWMPEKQLT 106 (311)
T ss_dssp ETTCEEEEEEE-ETTEEEEEETTCCBTTBSSCEEEEEEGGGEE
T ss_pred cCCCEEEEEEe-eCCEEEEEECCcccccCCCCcEEEEEHHHcC
Confidence 35999999986 588999874 7889999998885
No 332
>2hbw_A NLP/P60 protein; NLP/P60 family protein, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; HET: UNL; 1.05A {Anabaena variabilis} PDB: 2evr_A 2fg0_A
Probab=27.96 E-value=24 Score=33.73 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=30.5
Q ss_pred CCCCCEEEEEEecCCCcccccC--CCccccccccchhhc
Q psy1488 197 FRAGDVIEVLDTLDRDWWWGTR--GEASGWFPSAFVRLR 233 (630)
Q Consensus 197 f~~gd~i~vl~~~~~~Ww~g~~--~g~~G~~P~~~v~~~ 233 (630)
+..|+.+.|++...++|.+.+. +|..||++..++...
T Consensus 39 ~l~Ge~~~Vl~~~~~~w~~v~~~~dgy~Gwv~~~~l~~~ 77 (235)
T 2hbw_A 39 AAVGRHLQVTSNQQGAAVEVCLCEDDYPGWLSLGDLGLL 77 (235)
T ss_dssp ECTTCEEEEEEEEETTEEEEEETTTTEEEEEEGGGGGGE
T ss_pred ecCCCEEEEEEecCCCEEEEEECcCCeeeeeehhhcccc
Confidence 5679999999766678999885 899999999887543
No 333
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=27.59 E-value=1e+02 Score=24.63 Aligned_cols=51 Identities=14% Similarity=0.344 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhhhHHHHhh----cCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q psy1488 282 RDFVKVLHDVSEGYLAECRR----RNDMFSPEQIQTIFGNLEDILAFQSSFLEDLETK 335 (630)
Q Consensus 282 ~~Yv~~L~~l~~~y~~~l~~----~~~~l~~~~~~~iF~ni~~I~~~h~~ll~~L~~~ 335 (630)
..|++.|+.=+++|...|+. ..++-....+..||-++ -..|..+|.-+++.
T Consensus 3 ~ef~~~l~~sv~if~NRmksn~~RGrsi~nDssVQsLF~~l---t~MH~~Ll~~i~~~ 57 (98)
T 3f1i_H 3 EQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSI---NGMHPQLLELLNQL 57 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcccHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 35788888888888888764 23455567788888655 55566666655543
No 334
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=26.04 E-value=7e+02 Score=27.56 Aligned_cols=101 Identities=12% Similarity=0.218 Sum_probs=57.6
Q ss_pred CccEEEeeeEEEEecC--cceeEEEEEEeCCeEEEEEeccCCCceeEEEeEeecCcceeeeCCCCCCCCCCcccceeEEE
Q psy1488 482 SSQLIHQGEVIRVTSG--MWTNTITLFLFDHQLVYCKRDILKRNTHVYKARLNIDTSQIINLPDGKDPHLGVTVRHAIKI 559 (630)
Q Consensus 482 ~r~ll~~G~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~L~~~~v~~~~d~~~~~~g~~~~~~f~I 559 (630)
+...++.|.+.+.... ...+.+++.|+..-+...... .....+. .++.+.-+ ..+. ..-.++|.+
T Consensus 556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~-~~~~~l~-----~~~~v~~v--~k~~-----i~~~~~l~~ 622 (689)
T 3v5w_A 556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG-EAPQSLL-----TMEEIQSV--EETQ-----IKERKCLLL 622 (689)
T ss_dssp SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTT-SCCCEEE-----EGGGEEEE--EEEE-----SSSCEEEEE
T ss_pred CCcceeecccccCCCcccchhhhhccccCCCcccccccC-CCCccee-----eecccccc--ccCc-----CCCCcceee
Confidence 3455677877653311 123578899998888766432 1122222 22222211 1111 012356666
Q ss_pred EecCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHhhcc
Q psy1488 560 HCSDKDKWLLFCCRSLEDKARWLAAFQQERALVEQDR 596 (630)
Q Consensus 560 ~~~~~~~~~~l~a~s~~ek~~W~~~L~~a~~~~~~~~ 596 (630)
... ..+.|.+.+.+..+...|...|+++-+..+...
T Consensus 623 ~~k-~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~~l 658 (689)
T 3v5w_A 623 KIR-GGKQFILQCDSDPELVQWKKELRDAYREAQQLV 658 (689)
T ss_dssp EET-TTEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eec-CCcEEEEECCChHHHHHHHHHHHHHHHHHHHHH
Confidence 654 346788899999999999999998876654433
Done!