Query psy14885
Match_columns 483
No_of_seqs 316 out of 2767
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 23:18:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdd_A Lithostathine; pancreat 99.9 1E-25 3.5E-30 196.8 13.0 131 26-183 11-143 (144)
2 2py2_A Antifreeze protein type 99.9 6.9E-26 2.4E-30 196.2 10.4 129 27-186 2-131 (136)
3 2kv3_A Regenerating islet-deri 99.9 1.1E-25 3.9E-30 193.2 10.9 128 27-184 1-131 (131)
4 1uv0_A Pancreatitis-associated 99.9 2.1E-25 7.3E-30 196.0 11.7 136 26-183 11-148 (149)
5 1jzn_A Galactose-specific lect 99.9 2.7E-25 9.1E-30 191.8 11.5 130 27-183 1-134 (135)
6 1gz2_A Ovocleidin-17, OC-17 ov 99.9 2.2E-25 7.4E-30 194.1 10.5 130 26-183 2-141 (142)
7 3vpp_A C-type lectin domain fa 99.9 3.9E-25 1.3E-29 190.3 11.8 126 26-184 1-127 (132)
8 3bx4_B Aggretin beta chain; to 99.9 3.2E-25 1.1E-29 194.3 10.6 120 28-183 24-145 (146)
9 1tn3_A Tetranectin; plasminoge 99.9 2.3E-25 7.9E-30 192.8 9.1 129 26-183 3-135 (137)
10 1wmz_A Lectin CEL-I, N-acetyl- 99.9 4.1E-25 1.4E-29 192.1 10.0 129 28-184 2-139 (140)
11 1c3a_A Flavocetin-A: alpha sub 99.9 8E-25 2.7E-29 189.0 11.6 126 27-184 2-133 (135)
12 1ypq_A Oxidised low density li 99.9 7.9E-25 2.7E-29 189.1 11.6 127 25-184 5-133 (135)
13 1jwi_A Bitiscetin; domain swap 99.9 7E-25 2.4E-29 188.3 11.1 126 27-185 2-130 (131)
14 1egg_A Macrophage mannose rece 99.9 1.1E-24 3.6E-29 191.0 12.1 131 27-185 3-141 (147)
15 2afp_A Protein (SEA raven type 99.9 4E-25 1.4E-29 189.4 9.0 124 26-183 4-128 (129)
16 1ukm_A EMS16 A chain, EMS16 su 99.9 9.4E-25 3.2E-29 188.2 11.2 128 27-184 2-133 (134)
17 1umr_A Convulxin alpha, CVX al 99.9 1E-24 3.5E-29 188.4 11.1 126 27-184 2-133 (135)
18 2c6u_A CLEC1B protein; lectin, 99.9 5.9E-25 2E-29 186.6 9.4 120 27-184 1-121 (122)
19 3ubu_A Agglucetin subunit alph 99.9 1.1E-24 3.8E-29 187.0 11.1 127 27-184 2-131 (131)
20 1fvu_A Botrocetin alpha chain; 99.9 9.6E-25 3.3E-29 188.0 10.5 126 28-184 1-132 (133)
21 2ox9_A Collectin placenta 1; C 99.9 1.6E-24 5.5E-29 188.4 11.9 125 27-185 3-133 (140)
22 1tdq_B Aggrecan core protein; 99.9 1.5E-24 5.3E-29 185.9 11.0 124 26-183 4-130 (130)
23 1j34_A Coagulation factor IX-b 99.9 1.9E-24 6.4E-29 184.9 11.3 123 28-182 1-129 (129)
24 2e3x_B Coagulation factor X-ac 99.9 1.3E-24 4.4E-29 187.4 10.0 125 28-184 2-132 (134)
25 3bx4_A Aggretin alpha chain; t 99.9 2E-24 6.9E-29 186.8 11.0 126 27-184 3-135 (136)
26 1sb2_A Rhodocetin alpha subuni 99.9 1.9E-24 6.4E-29 186.1 10.8 126 28-184 1-131 (133)
27 1dv8_A Asialoglycoprotein rece 99.9 4E-24 1.4E-28 182.9 12.3 120 29-183 1-127 (128)
28 3c22_A C-type lectin domain fa 99.9 2.7E-24 9.4E-29 190.6 11.3 128 26-184 20-151 (156)
29 1oz7_A Echicetin A-chain; plat 99.9 3.1E-24 1.1E-28 184.3 11.0 128 28-185 1-130 (131)
30 1fvu_B Botrocetin beta chain; 99.9 1.7E-24 6E-29 184.3 9.3 121 28-183 1-124 (125)
31 1sb2_B Rhodocetin beta subunit 99.9 3.1E-24 1.1E-28 183.9 10.4 122 27-184 2-127 (129)
32 3gpr_D Rhodocetin subunit delt 99.9 1.8E-24 6.1E-29 184.0 8.8 121 29-183 1-123 (124)
33 2zib_A Type II antifreeze prot 99.9 4.7E-24 1.6E-28 183.9 11.5 125 26-184 7-132 (133)
34 3kqg_A Langerin, C-type lectin 99.9 4.4E-24 1.5E-28 194.3 11.5 127 27-185 47-178 (182)
35 3gpr_C Rhodocetin subunit gamm 99.9 2.1E-24 7.2E-29 186.1 8.5 126 28-184 2-132 (134)
36 1htn_A Tetranectin; plasminoge 99.9 4.2E-24 1.4E-28 194.4 10.8 129 26-183 48-180 (182)
37 3alu_A Lectin CEL-IV, C-type; 99.9 2.4E-24 8.1E-29 191.2 8.5 130 27-184 3-151 (157)
38 1ukm_B EMS16 B chain, EMS16 su 99.9 6.3E-24 2.2E-28 181.6 10.7 123 29-185 1-125 (128)
39 3bdw_A Natural killer cells an 99.9 1.7E-24 5.8E-29 184.0 7.1 120 26-184 2-122 (123)
40 2bpd_A Dectin-1; receptor, bet 99.9 9.2E-24 3.1E-28 184.2 11.6 128 23-183 11-141 (142)
41 1jwi_B Platelet aggregation in 99.9 5.3E-24 1.8E-28 181.4 9.7 120 27-183 2-124 (125)
42 2ls8_A C-type lectin domain fa 99.8 1.5E-25 5.2E-30 198.8 0.0 130 28-186 2-132 (156)
43 2vuv_A Codakine; sugar-binding 99.9 6E-24 2E-28 182.1 9.6 123 28-184 1-128 (129)
44 2b6b_D CD209 antigen; cryo EM 99.9 1.4E-23 4.9E-28 189.6 12.4 130 24-185 22-153 (175)
45 3rs1_A C-type lectin domain fa 99.9 1.9E-23 6.4E-28 177.3 12.4 118 25-183 4-121 (122)
46 1j34_B Coagulation factor IX-b 99.9 7.7E-24 2.6E-28 179.8 9.9 120 28-183 1-122 (123)
47 1umr_C Convulxin beta, CVX bet 99.9 1.1E-23 3.9E-28 179.3 10.9 121 27-183 2-124 (125)
48 1sl6_A C-type lectin DC-signr; 99.9 1.7E-23 6E-28 190.7 12.8 127 26-184 50-178 (184)
49 2yhf_A C-type lectin domain fa 99.9 8.8E-24 3E-28 178.1 10.0 117 28-184 1-118 (118)
50 1oz7_B Echicetin B-chain; plat 99.9 7.8E-24 2.7E-28 179.7 9.6 120 28-183 1-122 (123)
51 2e3x_C Coagulation factor X-ac 99.9 1.6E-23 5.6E-28 177.5 11.5 119 28-182 2-122 (122)
52 3g8k_A Lectin-related NK cell 99.9 1.1E-23 3.6E-28 180.8 10.0 121 27-185 5-126 (130)
53 3ubu_B Agglucetin subunit beta 99.9 1.3E-23 4.4E-28 179.0 10.3 122 27-183 2-125 (126)
54 1c3a_B Flavocetin-A: beta subu 99.9 1.2E-23 4.1E-28 179.1 10.0 121 27-183 2-124 (125)
55 1hq8_A NKG2-D; homodimer, CIS- 99.9 3.4E-24 1.2E-28 182.1 6.5 118 26-183 3-121 (123)
56 1mpu_A NKG2-D type II integral 99.9 4.6E-24 1.6E-28 185.2 6.6 123 22-184 14-137 (138)
57 2h2t_B Low affinity immunoglob 99.9 1.2E-23 4E-28 190.3 9.4 127 23-184 11-140 (175)
58 1hup_A Mannose-binding protein 99.9 1.2E-23 4.1E-28 183.2 9.1 120 28-183 19-140 (141)
59 3bdw_B NKG2-A/NKG2-B type II i 99.9 2.4E-23 8.2E-28 176.1 10.5 117 26-183 4-120 (120)
60 2xr6_A CD209 antigen; sugar bi 99.9 1.9E-23 6.5E-28 188.0 10.3 129 25-185 18-148 (170)
61 3m9z_A Killer cell lectin-like 99.9 3.6E-23 1.2E-27 179.6 10.2 124 26-185 3-127 (139)
62 3hup_A Early activation antige 99.9 9.8E-23 3.3E-27 174.9 12.2 118 24-183 11-128 (130)
63 1rtm_1 Mannose-binding protein 99.9 3.2E-23 1.1E-27 182.3 9.1 120 28-183 27-148 (149)
64 2kq2_A Ribonuclease H-related 99.9 1E-23 3.6E-28 184.6 5.4 124 220-347 6-140 (147)
65 3ff7_C Killer cell lectin-like 99.9 6.6E-23 2.3E-27 171.2 9.5 112 29-182 1-112 (112)
66 3ff9_A Killer cell lectin-like 99.9 5.2E-23 1.8E-27 172.6 8.7 114 28-184 1-114 (115)
67 1fm5_A Early activation antige 99.9 1.4E-22 4.7E-27 186.9 12.0 118 25-184 81-198 (199)
68 3qio_A GAG-POL polyprotein; RN 99.9 1.9E-22 6.5E-27 176.8 11.8 121 220-344 12-147 (150)
69 2qkb_A Ribonuclease H1, HS-RNA 99.9 2.6E-22 9E-27 177.3 12.6 124 221-345 8-152 (154)
70 1buu_A Protein (mannose-bindin 99.9 1.1E-22 3.6E-27 182.7 9.5 120 28-183 46-167 (168)
71 3h08_A RNH (ribonuclease H); R 99.9 1.6E-22 5.5E-27 177.2 9.1 122 220-344 4-144 (146)
72 3c8j_A Natural killer cell rec 99.9 1.1E-22 3.6E-27 188.2 8.0 122 26-185 77-199 (203)
73 2msb_A Mannose-binding protein 99.9 4.1E-22 1.4E-26 167.1 10.2 112 36-183 1-114 (115)
74 3p1g_A Xenotropic murine leuke 99.9 3.3E-22 1.1E-26 177.6 9.8 125 220-347 23-159 (165)
75 2e4l_A Ribonuclease HI, RNAse 99.9 4.2E-22 1.4E-26 176.6 8.9 123 219-344 5-145 (158)
76 1jl1_A Ribonuclease HI; RNAse 99.9 5.6E-22 1.9E-26 175.3 9.7 125 220-347 4-146 (155)
77 3g8l_A Lectin-related NK cell 99.9 4E-22 1.4E-26 182.6 8.3 123 26-185 63-186 (190)
78 1rdl_1 SUB-MBP-C, mannose-bind 99.9 2.1E-21 7.1E-26 162.3 11.5 110 38-183 1-112 (113)
79 1wk1_A Hypothetical protein YK 99.9 1.1E-21 3.9E-26 172.5 9.6 118 35-184 2-131 (150)
80 1pwb_A SP-D, PSP-D, pulmonary 99.9 1.1E-21 3.8E-26 177.5 9.7 122 28-182 54-177 (177)
81 1h8u_A MBP, eosinophil granule 99.8 2E-21 6.9E-26 163.3 10.0 114 39-182 1-117 (117)
82 3pbf_A Pulmonary surfactant-as 99.8 3.1E-21 1.1E-25 169.3 10.4 121 29-182 27-148 (148)
83 1byf_A TC14, protein (polyandr 99.8 4.9E-21 1.7E-25 163.0 9.8 115 37-184 1-123 (125)
84 1ril_A Ribonuclease H; hydrola 99.8 1.8E-21 6.1E-26 173.8 5.7 124 220-346 8-150 (166)
85 2lsn_A Reverse transcriptase; 99.8 3.6E-20 1.2E-24 164.3 8.7 124 219-343 6-162 (165)
86 3hst_B Protein RV2228C/MT2287; 99.8 2.5E-19 8.5E-24 155.8 11.5 120 221-344 4-133 (141)
87 3u3g_D Ribonuclease H, RNAse H 99.8 2.8E-19 9.7E-24 155.1 10.3 120 221-344 4-137 (140)
88 3cfw_A L-selectin; EGF, cell a 99.8 6.1E-19 2.1E-23 157.4 8.4 115 39-184 1-121 (164)
89 1g1t_A E-selectin; EGF, adhesi 99.8 1.1E-18 3.9E-23 154.4 9.6 116 39-184 1-121 (157)
90 2ehg_A Ribonuclease HI; RNAse 99.8 1.8E-18 6.2E-23 151.8 10.7 119 222-345 3-135 (149)
91 1g1s_A P-selectin; selectin, l 99.7 1.4E-18 4.9E-23 154.7 8.3 116 39-184 1-121 (162)
92 1mu2_A HIV-2 RT; HIV-2 reverse 99.7 5.1E-18 1.7E-22 180.2 11.1 114 221-342 437-555 (555)
93 2zd1_A Reverse transcriptase/r 99.7 3.8E-18 1.3E-22 181.2 9.2 114 220-341 439-557 (557)
94 1zbf_A Ribonuclease H-related 99.4 3.1E-13 1E-17 116.4 5.0 112 222-336 13-139 (142)
95 4htu_A Ribonuclease H, RNAse H 99.2 3.7E-11 1.3E-15 101.4 6.5 92 222-314 8-113 (134)
96 3k7b_A Protein A33; C-type lec 98.4 5.8E-08 2E-12 75.9 0.7 46 34-81 14-59 (96)
97 3fd4_A Glycoprotein GP42; C ty 94.7 0.1 3.5E-06 44.3 7.6 117 26-183 67-187 (191)
98 1o7b_T Tumor necrosis factor-i 69.3 2.1 7E-05 33.5 1.9 21 48-68 13-33 (98)
99 2jcq_A CD44 antigen; sugar-bin 56.9 4.8 0.00016 34.1 2.0 21 48-68 25-45 (154)
100 1rw3_A POL polyprotein; RNA an 42.3 13 0.00045 37.4 3.0 43 250-293 385-428 (455)
101 2fr5_A Cytidine deaminase; tet 36.2 47 0.0016 27.7 5.0 54 230-284 35-92 (146)
102 2lnd_A De novo designed protei 28.4 1.3E+02 0.0045 22.0 5.5 64 300-364 37-100 (112)
103 2zd1_B P51 RT; P51/P66, hetero 27.4 99 0.0034 30.6 6.6 67 217-286 322-399 (428)
104 1uwz_A Cytidine deaminase; CDD 27.0 83 0.0028 25.8 4.9 53 231-284 24-80 (136)
105 2z3g_A Blasticidin-S deaminase 23.1 1.1E+02 0.0036 24.9 4.8 52 231-283 27-80 (130)
106 1wkq_A Guanine deaminase; doma 22.0 64 0.0022 27.5 3.4 51 230-281 31-86 (164)
107 2nx8_A TRNA-specific adenosine 21.4 62 0.0021 28.0 3.2 52 230-282 35-91 (179)
108 2d30_A Cytidine deaminase; pur 20.5 1.1E+02 0.0038 25.2 4.5 53 231-284 33-89 (141)
109 1j0h_A Neopullulanase; beta-al 20.2 93 0.0032 32.2 4.9 80 258-337 174-259 (588)
No 1
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A
Probab=99.93 E-value=1e-25 Score=196.81 Aligned_cols=131 Identities=18% Similarity=0.363 Sum_probs=113.9
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
...||+||+.|+++||+++... ++|.+|+..|+.+ ||+|++|+|.+|++||..++.........||||+++..
T Consensus 11 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~----- 84 (144)
T 1qdd_A 11 RISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPK----- 84 (144)
T ss_dssp GTSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSCEECCCCSHHHHHHHHHHHHHTTCCCSEEEEEEECTT-----
T ss_pred CCCCCCCceecCCEeEEEeCCC-cCHHHHHHHhhccCCceECccCCHHHHHHHHHHHHhcCCCCCCEEEeeEcCC-----
Confidence 5689999999999999999995 9999999999998 89999999999999999999876544567777777543
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++...++|+.+....+.+.|++.+|+ ..++||||++
T Consensus 85 -----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~~~~W~d~~C~--~~~~fICe~~ 143 (144)
T 1qdd_A 85 -----------------KNRAWHWSSGSLVSY--KSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCE--DKFSFVCKFK 143 (144)
T ss_dssp -----------------SSSCCEETTCCCCCC--CCBCTTCSCSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEE
T ss_pred -----------------CCCeEEeCCCCCcCc--CccCCCCcCCCCCCCcEEEEecCCCCeEeCCCCC--CCceeeeeec
Confidence 457899999999876 78999 9998667899999876554479999999 9999999986
No 2
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus}
Probab=99.93 E-value=6.9e-26 Score=196.21 Aligned_cols=129 Identities=19% Similarity=0.366 Sum_probs=108.8
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
..||+||+.|+++||+++... ++|.+|+..|++.||+|++|+|++|++||..++.... ..||||+++..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~---~~~WIGl~~~~------- 70 (136)
T 2py2_A 2 DECPTDWKMFNGRCFLFNPLQ-LHWADAQESCMKEGANLASIHSLEESTFVKELTSADL---IPSWIGGTDCQ------- 70 (136)
T ss_dssp --CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHTTSTTTT---CCEEEEEECCS-------
T ss_pred CCCCcCceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHcCC---CCEeEeeEcCC-------
Confidence 479999999999999999995 9999999999999999999999999999999885432 56666666432
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~ 185 (483)
.++.|.|+||+++.+ .+|.+ +|++..+++||.+..... +.|+|.+|+ ..++||||+++.
T Consensus 71 ---------------~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fIC~~~~~ 130 (136)
T 2py2_A 71 ---------------VSTRWFWMDSTSMDY--ADWCAAQPDTTLTECCIQMNVGIG-KCWNDTPCT--HLHSSICAKPLK 130 (136)
T ss_dssp ---------------STTCCEETTCCCCCC--CCBCTTCCCCCGGGCEEEEEETTT-TEEEEECTT--SCEEEEEEEECC
T ss_pred ---------------CCCceEeCCCCCccc--CCCCCCCCCCCCCCCCeEEccCCC-CeEcCCCCC--CCccEEeeECcc
Confidence 468899999999875 89999 998866689999976533 469999999 999999999864
Q ss_pred h
Q psy14885 186 K 186 (483)
Q Consensus 186 ~ 186 (483)
.
T Consensus 131 ~ 131 (136)
T 2py2_A 131 H 131 (136)
T ss_dssp -
T ss_pred c
Confidence 3
No 3
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=193.20 Aligned_cols=128 Identities=17% Similarity=0.336 Sum_probs=106.8
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
+.||+||+.|+++||+++... ++|.+|+..|+.+ ||+||+|+|++|++||..++.... ....||||+++.
T Consensus 1 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WIGl~~~------ 72 (131)
T 2kv3_A 1 QSCAPGWFYHKSNCYGYFRKL-RNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQ-RSQSIWIGLHDP------ 72 (131)
T ss_dssp CCSCTTCCEETTEEEEEEEEE-ECHHHHHHHHHTTSSSCEECCCSSHHHHHHHHHHHTCTT-SCCCCBCSEECS------
T ss_pred CcCCcccEEcCCEeEEEECCC-CCHHHHHHHHhccCCCceEeeeCCHHHHHHHHHHHHhcC-CCCCEEEeccCC------
Confidence 369999999999999999995 9999999999999 999999999999999999986442 234445555432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|.+ +| ...++|+.+....+...|++.+|+ ..++||||++
T Consensus 73 ----------------~~~~~~~W~dg~~~~~--~~W~~~~P--~~~~~C~~~~~~~~~~~W~~~~C~--~~~~~iCe~~ 130 (131)
T 2kv3_A 73 ----------------QKRQQWQWIDGAMYLY--RSWSGKSM--GGNKHCAEMSSNNNFLTWSSNECN--KRQHFLCKYR 130 (131)
T ss_dssp ----------------SSSSCCEETTCCCCSS--CCCSSCCC--TTCTTEEEECTTCTTCCEEEECTT--CCEEEEEEEC
T ss_pred ----------------CCCCCeEeCCcCcccc--cccCCCCC--CCCCCceEEECCCCcCceecCCCC--CCceEEEeeC
Confidence 2468899999999965 88999 99 346899999876544369999999 9999999997
Q ss_pred h
Q psy14885 184 I 184 (483)
Q Consensus 184 ~ 184 (483)
|
T Consensus 131 p 131 (131)
T 2kv3_A 131 P 131 (131)
T ss_dssp C
T ss_pred C
Confidence 4
No 4
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A
Probab=99.92 E-value=2.1e-25 Score=195.97 Aligned_cols=136 Identities=20% Similarity=0.322 Sum_probs=112.7
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc-CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~-g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
...||+||+.|+++||+++... ++|.+|+..|+.+ ||+|++|+|.+|++||..++.........||||+++...
T Consensus 11 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~---- 85 (149)
T 1uv0_A 11 RIRCPKGSKAYGSHCYALFLSP-KSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLHDPTQ---- 85 (149)
T ss_dssp CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHTTSTTCEECCCCSHHHHHHHHHHHTTSCTTCCEEEEEEECTTT----
T ss_pred CCCCCccccccCCEEEEEECCC-CCHHHHHHHhhcCCCccEeEeCCHHHHHHHHHHHHhhccCCCCEEEeeEccCC----
Confidence 4679999999999999999994 9999999999998 899999999999999999997654445677888875430
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
. | ....+.|.|+||+++.+ .+|.+ +|++...++|+.+....+.+.|++.+|+ ..++||||++
T Consensus 86 ---~---------~-~~~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~~~~W~d~~C~--~~~~fICe~~ 148 (149)
T 1uv0_A 86 ---G---------T-EPNGEGWEWSSSDVMNY--FAWERNPSTISSPGHCASLSRSTAFLRWKDYNCN--VRLPYVCKFT 148 (149)
T ss_dssp ---T---------C-C--CCCCEETTCCCCCC--CCBSSCGGGSSSCCSEEEEEGGGTTCSEEEECTT--SCEEEEEEEC
T ss_pred ---C---------C-ccCCCccEECCCCccCc--cCcCCCCcCCCCCCCCEEEEcCCCCCeEeCcCCC--CCCceEEeec
Confidence 0 0 00124599999999875 88999 9987667899999876544579999999 9999999986
No 5
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Probab=99.92 E-value=2.7e-25 Score=191.81 Aligned_cols=130 Identities=16% Similarity=0.281 Sum_probs=110.8
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++.........||||+++..
T Consensus 1 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~----- 74 (135)
T 1jzn_A 1 NNCPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKK----- 74 (135)
T ss_dssp CCSCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECTT-----
T ss_pred CcCCCCceeeCCEEEEEECCc-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcccCCCCEEEeeEcCC-----
Confidence 369999999999999999995 999999999999 699999999999999999998765434456677776432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++.+ .+|.+ +|++.. .++|+.+....+.+.|++.+|+ ..++||||+
T Consensus 75 -----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~~~~~w~~~~C~--~~~~~ICe~ 133 (135)
T 1jzn_A 75 -----------------KDFSWEWTDRSCTDY--LTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCE--SKDAFLCQC 133 (135)
T ss_dssp -----------------SSSCCEETTCCCCCC--CCBCTTCCCCGGGCCCEEEECGGGTTCSEEEECTT--SCEEEEEEE
T ss_pred -----------------cCCceEECCCCccCc--CcCCcCCCCCCCCCCCceEEECCCCCCcCCCcCCC--CCCceeeee
Confidence 468899999999876 88999 999754 6899999876543469999999 999999998
Q ss_pred c
Q psy14885 183 S 183 (483)
Q Consensus 183 ~ 183 (483)
+
T Consensus 134 ~ 134 (135)
T 1jzn_A 134 K 134 (135)
T ss_dssp C
T ss_pred c
Confidence 6
No 6
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1
Probab=99.92 E-value=2.2e-25 Score=194.10 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=109.2
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCC------C-CCceeeecc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP------Q-RRKWYFGGT 96 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~------~-~~~~wig~~ 96 (483)
+..||+||+.|++.||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++..... . ...||||++
T Consensus 2 ~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~~~~WIGl~ 80 (142)
T 1gz2_A 2 PDGCGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGSGEGADGRVWIGLH 80 (142)
T ss_dssp --CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCTTEEECCCCSHHHHHHHHHHHHCSSCCSSSCCCCSSCEEEEEE
T ss_pred CCCCCcccEEcCCEEEEEcCCC-cCHHHHHHHHhccCCCceECccCCHHHHHHHHHHHHhcccccccccccCCCEEEEee
Confidence 4679999999999999999995 999999999999 99999999999999999999876532 1 445566665
Q ss_pred cCCCCcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCc
Q psy14885 97 QQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEP 175 (483)
Q Consensus 97 ~~~~~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~ 175 (483)
+.. .++.|.|+||+++.+ .+|.+ +|++. .++|+.+....+...|++.+|+ ..
T Consensus 81 ~~~----------------------~~~~w~W~dg~~~~~--~~W~~~~P~~~-~~~C~~~~~~~~~~~w~~~~C~--~~ 133 (142)
T 1gz2_A 81 RPA----------------------GSRSWRWSDGTAPRF--ASWHRTAKARR-GGRCAALRDEEAFTSWAARPCT--ER 133 (142)
T ss_dssp CCT----------------------TCSSCEETTSCCCCC--CCBCSSSGGGC-SCSEEEECTTTTSSCEEEECTT--CC
T ss_pred cCC----------------------CCCCcEeCCCCccCc--cCcCCCCCCCC-CCCCeEEecCCCCCeEecCCCC--CC
Confidence 432 468899999999875 78999 99876 6899999876543469999999 99
Q ss_pred eeeeeecc
Q psy14885 176 LLFICEAS 183 (483)
Q Consensus 176 ~~fvCe~~ 183 (483)
++||||++
T Consensus 134 ~~fICe~~ 141 (142)
T 1gz2_A 134 NAFVCKAA 141 (142)
T ss_dssp EEEEEEEE
T ss_pred ceeEEeec
Confidence 99999987
No 7
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}
Probab=99.92 E-value=3.9e-25 Score=190.26 Aligned_cols=126 Identities=20% Similarity=0.319 Sum_probs=103.1
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+.+||+||+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..++.... ....||||+++..
T Consensus 1 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WIGl~~~~------ 72 (132)
T 3vpp_A 1 SSPCPNNWIQNRESCYYVSEIW-SIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIK-GSYDYWVGLSQDG------ 72 (132)
T ss_dssp -CCSCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTTSS-SCCEEEEEEEECT------
T ss_pred CCCCCccceEeCCEEEEEECCc-cCHHHHHHHHHhcCCEEeEECCHHHHHHHHHHHhccC-CCccEEEEecccC------
Confidence 4689999999999999999995 9999999999999999999999999999999886542 2345666666432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ .+|.+ +|+. +.++|+.+.. +.|++.+|+ ..++||||+++
T Consensus 73 ----------------~~~~w~W~dg~~~~~--~~w~~~~p~~-~~~~C~~~~~----~~w~~~~C~--~~~~fiCe~~~ 127 (132)
T 3vpp_A 73 ----------------HSGRWLWQDGSSPSP--GLLPAERSQS-ANQVCGYVKS----NSLLSSNCD--TWKYFICEKYA 127 (132)
T ss_dssp ----------------TTCCEEETTSCCCCT--TSCCCC-------CEEEEEET----TEEEEEESS--SCBEEEEEEEC
T ss_pred ----------------CCCceEecCCCcCCh--hhcccCCCCC-CCCceEEEEC----CeEeccCCC--CCceEECCccc
Confidence 468899999999976 78988 6654 5689999963 359999999 99999999985
No 8
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=99.92 E-value=3.2e-25 Score=194.34 Aligned_cols=120 Identities=23% Similarity=0.421 Sum_probs=100.2
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
.||+||+.|+++||+++... ++|.+|+..|++ .||+|++|+|++|++||..++..... ...+|||+++.
T Consensus 24 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------- 94 (146)
T 3bx4_B 24 DCPSGWSSYEGHCYKPFNEP-KNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLK-ANLVWMGLSNI------- 94 (146)
T ss_dssp -CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHSSSCCEECCCSSHHHHHHHHHHHTTTTT-TSEEECSCCCT-------
T ss_pred CCCcCcEeeCCEEEEEECCC-cCHHHHHHHHhccCCCceEeccCCHHHHHHHHHHHhhcCC-CCCEEEecccC-------
Confidence 79999999999999999995 999999999999 59999999999999999999865421 44555555532
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|..+| +|+.+....+ .|+|.+|+ ..++||||++
T Consensus 95 ---------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~~ 145 (146)
T 3bx4_B 95 ---------------WHGCNWQWSDGARLNY--KDWQEQS------ECLAFRGVHT--EWLNMDCS--STCSFVCKFK 145 (146)
T ss_dssp ---------------TSSSCEEETTCCCCCS--CCBCSCC------EEEEEETTCC--CEEEEETT--SCEEEEEEEE
T ss_pred ---------------CCCCceEeCCCCcccc--cCcCCCC------CceEEECCCC--eEecCCCC--CCcceEEeec
Confidence 2468899999999875 7886444 8999976544 69999999 9999999987
No 9
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Probab=99.92 E-value=2.3e-25 Score=192.80 Aligned_cols=129 Identities=16% Similarity=0.282 Sum_probs=110.5
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||+||. |+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++.........||||+++..
T Consensus 3 ~~~Cp~gw~-~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------ 74 (137)
T 1tn3_A 3 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMA------ 74 (137)
T ss_dssp CCEEEECSS-SSEEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEEEEE------
T ss_pred CCCCCCCeE-ECCEEEEEeCCC-CCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEeeEccC------
Confidence 357999998 999999999995 999999999999999999999999999999998766444566777776432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCC---C-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFL---P-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~---~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ .+|. + +|++.+.++|+.+..... +.|++.+|+ ..++||||
T Consensus 75 ----------------~~~~w~W~dg~~~~~--~~W~~~~~g~P~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fiCe 133 (137)
T 1tn3_A 75 ----------------AEGTWVDMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN-GKWFDKRCR--DQLPYICQ 133 (137)
T ss_dssp ----------------ETTEEEETTSCBCSC--CCBCCTTTCSSCCGGGCCEEEEETTTT-TEEEEECTT--SCEEEEEE
T ss_pred ----------------CCceEEeCCcCCCcc--cccCcCCCCcCCCCCccCCcEEccCCC-CeEeCcCCC--CCccceEe
Confidence 367899999999875 8899 9 999866789999975433 469999999 99999999
Q ss_pred cc
Q psy14885 182 AS 183 (483)
Q Consensus 182 ~~ 183 (483)
++
T Consensus 134 ~~ 135 (137)
T 1tn3_A 134 FG 135 (137)
T ss_dssp EE
T ss_pred Ee
Confidence 97
No 10
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Probab=99.92 E-value=4.1e-25 Score=192.09 Aligned_cols=129 Identities=21% Similarity=0.461 Sum_probs=111.1
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhh-------hcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK-------SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSP 100 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~-------~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~ 100 (483)
.||+||+.|+++||+++... ++|.+|+..|+ ..||+|++|+|.+|++||..++.........||||+++..
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~- 79 (140)
T 1wmz_A 2 QCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQAGQLWIGLYDKY- 79 (140)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCBGGGTEEEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECSS-
T ss_pred cCCCcceecCCEEEEEECCC-cCHHHHHHhhhhhccCCCCCCcEEcccCCHHHHHHHHHHHhhccCCCCCEEEeeeecC-
Confidence 69999999999999999995 99999999999 9999999999999999999999766444556677776432
Q ss_pred CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceee
Q psy14885 101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLF 178 (483)
Q Consensus 101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~f 178 (483)
.++.|.|+||+++.+ .+|.+ +|++.. .++|+.+....+. .|++.+|+ ..++|
T Consensus 80 ---------------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~Cv~~~~~~~~-~W~~~~C~--~~~~f 133 (140)
T 1wmz_A 80 ---------------------NEGDFIWTDGSKVGY--TKWAGGQPDNWNNAEDYGQFRHTEGG-AWNDNSAA--AQAKY 133 (140)
T ss_dssp ---------------------STTCCEETTCCCCCC--CCBCTTCCCCGGGCEEEEEECSSTTT-CEEEEETT--CCEEE
T ss_pred ---------------------CCCeeEECCcCcccc--cCcCcccCCCCCCcCCcEEEccCCCC-CEeCCCCC--CCceE
Confidence 468899999999865 78999 998753 6899999876542 69999999 99999
Q ss_pred eeecch
Q psy14885 179 ICEASI 184 (483)
Q Consensus 179 vCe~~~ 184 (483)
|||++.
T Consensus 134 ICe~~~ 139 (140)
T 1wmz_A 134 MCKLTF 139 (140)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999974
No 11
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A
Probab=99.92 E-value=8e-25 Score=188.97 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=108.4
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCC
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPN 101 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~ 101 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++........ .||||++ +..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~-- 78 (135)
T 1c3a_A 2 FDCIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKE-- 78 (135)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCSCCSEEEEEEEECCCS--
T ss_pred cCCCCcCEecCCeeEEEeCCC-cCHHHHHHHHhhcCCCCEECeeCCHHHHHHHHHHHhhccccCCCcEEecccccCCC--
Confidence 469999999999999999995 999999999999 89999999999999999999877643334 6777776 432
Q ss_pred cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885 102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180 (483)
Q Consensus 102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC 180 (483)
.++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++|||
T Consensus 79 --------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~d~~C~--~~~~fIC 129 (135)
T 1c3a_A 79 --------------------QQCRSEWSDASSVNY--ENLVKQFSK-----KCYALKKGTELRTWFNVYCG--TENPEVC 129 (135)
T ss_dssp --------------------SSCCCBCTTSCBCCC--CCBCGGGCC-----CEEEEETTSCSCSBEEECTT--SCEEEEE
T ss_pred --------------------CCCceEECCCCcccc--cccCCCCCC-----cceEEeccCCCCeEccCCCC--CCccEEc
Confidence 467899999999875 78999 997 89999876543469999999 9999999
Q ss_pred ecch
Q psy14885 181 EASI 184 (483)
Q Consensus 181 e~~~ 184 (483)
|+++
T Consensus 130 e~~~ 133 (135)
T 1c3a_A 130 KYTP 133 (135)
T ss_dssp EECC
T ss_pred ccCC
Confidence 9984
No 12
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Probab=99.92 E-value=7.9e-25 Score=189.14 Aligned_cols=127 Identities=19% Similarity=0.340 Sum_probs=107.9
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
....||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++.. ....||||+++..
T Consensus 5 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~~WIGl~~~~----- 75 (135)
T 1ypq_A 5 CSAPCPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISY---SSFPFWMGLSRRN----- 75 (135)
T ss_dssp CCCSSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTT---CCCCEEEEEEESS-----
T ss_pred cCCcCCcccEEcCCEEEEEECCc-cCHHHHHHHHHhCCCEEeEeCCHHHHHHHHHHHhc---cCCCEEEeccccC-----
Confidence 35789999999999999999995 99999999999999999999999999999999853 2345666665432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++..+ .+|.+ +|++.. .++|+.+.. +.|++.+|+ ..++||||+
T Consensus 76 -----------------~~~~w~W~dg~~~~~~-~~w~~g~P~~~~~~~~Cv~~~~----~~w~~~~C~--~~~~fICe~ 131 (135)
T 1ypq_A 76 -----------------PSYPWLWEDGSPLMPH-LFRVRGAVSQTYPSGTCAYIQR----GAVYAENCI--LAAFSICQK 131 (135)
T ss_dssp -----------------TTSCCEETTSCBCCTT-SCCEEESCSCCCTTCEEEEEET----TEEEEEETT--SCBEEEEEE
T ss_pred -----------------CCCCeEeCCcCccCcc-cccccCCCCCCCCCCCeeEEeC----CcEEccCCC--CCeeeEeee
Confidence 4688999999998644 88999 998743 689999963 359999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 132 ~~ 133 (135)
T 1ypq_A 132 KA 133 (135)
T ss_dssp EC
T ss_pred cC
Confidence 84
No 13
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A
Probab=99.92 E-value=7e-25 Score=188.31 Aligned_cols=126 Identities=19% Similarity=0.322 Sum_probs=103.3
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCcc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNLW 103 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~W 103 (483)
..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++........ .||||++ +..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~---- 76 (131)
T 1jwi_A 2 PGCLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDESKT---- 76 (131)
T ss_dssp --CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHC--CCSCEEEEEEECCSS----
T ss_pred cCCCCCCEEeCCEeEEEECCC-cCHHHHHHHHHHcCCeECccCCHHHHHHHHHHHhhcccccCccEEEeeeecCCC----
Confidence 469999999999999999995 99999999999999999999999999999999876543334 6777776 432
Q ss_pred cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|. +|+ +|+.+....+.+.|++.+|+ ..++||||++
T Consensus 77 ------------------~~~~~~W~dg~~~~~--~~W~-~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~fICe~~ 128 (131)
T 1jwi_A 77 ------------------QQCSPQWTDGSSVVY--ENVD-EPT-----KCFGLDVHTEYRTWTDLPCG--EKNPFICKSR 128 (131)
T ss_dssp ------------------SSSCSBCTTSCBCCS--CCBS-SCC-----CEEEECGGGTTSSEEEECTT--SCEEEEEEC-
T ss_pred ------------------CCCceEEeCcCcccC--cCCC-CCC-----CceEEecCCCCCeEcCcCCC--CCcceeeCcC
Confidence 468899999999876 7898 875 89999876533469999999 9999999998
Q ss_pred hh
Q psy14885 184 IQ 185 (483)
Q Consensus 184 ~~ 185 (483)
.+
T Consensus 129 ~p 130 (131)
T 1jwi_A 129 LP 130 (131)
T ss_dssp --
T ss_pred CC
Confidence 53
No 14
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Probab=99.91 E-value=1.1e-24 Score=190.96 Aligned_cols=131 Identities=18% Similarity=0.323 Sum_probs=108.4
Q ss_pred CCCcccc--cccCCeEEEEec----CCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCC
Q psy14885 27 LRCPQHW--VQYRDSCYRFVK----SPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSP 100 (483)
Q Consensus 27 ~~C~~gw--~~~~~~Cy~~~~----~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~ 100 (483)
..||.|| +.|+++||+++. . .++|.+|+..|+.+||+|++|++.+|++||..++.........||||+++..
T Consensus 3 ~~Cp~gw~~~~~~~~CY~~~~~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~- 80 (147)
T 1egg_A 3 PKCPEDWGASSRTSLCFKLYAKGKHE-KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGS- 80 (147)
T ss_dssp --CCTTCEECSSSSCEEEEECSCGGG-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECC--
T ss_pred CCCCCCCccccCCCEEEEEeccCCcc-ccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhccCCCCcEEEeeecCC-
Confidence 4699999 999999999998 7 4999999999999999999999999999999998776544567777776533
Q ss_pred CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceee
Q psy14885 101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLF 178 (483)
Q Consensus 101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~f 178 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++|+.+..... +.|++.+|+ ..++|
T Consensus 81 ---------------------~~~~w~W~dg~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~f 134 (147)
T 1egg_A 81 ---------------------PSEGFTWSDGSPVSY--ENWAYGEPNNYQNVEYCGELKGDPT-MSWNDINCE--HLNNW 134 (147)
T ss_dssp ------------------------CCCCTTSCCCCC--CCCCTTCSCGGGSCCEEEEEECSTT-CCEEEEETT--SCBEE
T ss_pred ---------------------CCCcEEecCCCCccc--CccCCCCCCCCCCCCCCeEECCCCC-CceeccCCC--CCccE
Confidence 467899999999876 78999 99874 4689999976522 469999999 99999
Q ss_pred eeecchh
Q psy14885 179 ICEASIQ 185 (483)
Q Consensus 179 vCe~~~~ 185 (483)
|||+++.
T Consensus 135 ICe~~~~ 141 (147)
T 1egg_A 135 ICQIQKG 141 (147)
T ss_dssp EEECCC-
T ss_pred EeeCCCC
Confidence 9999853
No 15
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1
Probab=99.91 E-value=4e-25 Score=189.36 Aligned_cols=124 Identities=22% Similarity=0.416 Sum_probs=105.8
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..+ ....||||+++.
T Consensus 4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~------~~~~~WIGl~~~------- 69 (129)
T 2afp_A 4 GPNCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTL------NAGVVWIGGSAC------- 69 (129)
T ss_dssp CCSSCSSSCCCSSSEECCCCSC-CCHHHHHHHHHHHSCEECCCSSSHHHHHHHHH------CSSCBCCSCBCS-------
T ss_pred cCCCCcCcEEcCCEEEEEECCc-CCHHHHHHHHHHcCCEECCcCCHHHHHHHHhc------CCCCEEEccccc-------
Confidence 5689999999999999999995 99999999999999999999999999999987 223445555432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|.+ +|++..+++|+.+....+. .|++.+|+ ..++||||++
T Consensus 70 ---------------~~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~C~~~~~~~~~-~w~~~~C~--~~~~~iCe~~ 128 (129)
T 2afp_A 70 ---------------LQAGAWTWSDGTPMNF--RSWCSTKPDDVLAACCMQMTAAADQ-CWDDLPCP--ASHKSVCAMT 128 (129)
T ss_dssp ---------------SSSSCCBSSSSCCCCC--CCSSSCCSCCSTTCCBCCBCCSSSS-CBCCBCSC--CCCCCCEEEC
T ss_pred ---------------CCCCceEeCCCCcccc--CCcCCCccCCCCCCCCeEEccCCCC-EEeCCCCC--CCcceEEeee
Confidence 2468899999999965 88999 9998656899999766543 69999999 9999999986
No 16
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A*
Probab=99.91 E-value=9.4e-25 Score=188.19 Aligned_cols=128 Identities=16% Similarity=0.327 Sum_probs=107.6
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecccCCCCcc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGTQQSPNLW 103 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~~~~~~~W 103 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++........ .||||+++..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~---- 76 (134)
T 1ukm_A 2 FDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYVWIGLRDRR---- 76 (134)
T ss_dssp -CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHTGGGGGSSCCEEEEEEEECC----
T ss_pred cCCCCccEecCCEEEEEECCC-cCHHHHHHHHhhcCCCcEECccCCHHHHHHHHHHHhhhccCCCCCEEEeeecCC----
Confidence 469999999999999999995 999999999999 89999999999999999999876533334 6777776541
Q ss_pred cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
...++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++||||+
T Consensus 77 ----------------~~~~~~~~W~dg~~~~~--~~W~~g~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~~ICe~ 131 (134)
T 1ukm_A 77 ----------------EEQQCNPEWNDGSKIIY--VNWKEGESK-----MCQGLTKWTNFHDWNNINCE--DLYPFVCKF 131 (134)
T ss_dssp ----------------SSSCSCCBCTTSCBCCC--CCBCTTCCC-----CEEEEEGGGTSCSEEEECTT--SCEEEEEEE
T ss_pred ----------------CCCCCceEEcCcCcccc--ceECCCcCc-----cceEEEecCCCCeeecCCCC--CCceeEEeE
Confidence 02468899999999876 78999 997 99999876543469999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 132 ~~ 133 (134)
T 1ukm_A 132 SA 133 (134)
T ss_dssp EC
T ss_pred cC
Confidence 73
No 17
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A
Probab=99.91 E-value=1e-24 Score=188.37 Aligned_cols=126 Identities=17% Similarity=0.356 Sum_probs=107.8
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCC
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPN 101 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~ 101 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+||+|+|++|++||..++........ .||||++ +.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~--- 77 (135)
T 1umr_A 2 LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNK--- 77 (135)
T ss_dssp CSSCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCTTCCEEECSEEECCS---
T ss_pred CCCCCCCEEcCCEeEEEECCC-CCHHHHHHHHHccCCCceECccCCHHHHHHHHHHHHhhcccCCCCEEEeccccCC---
Confidence 479999999999999999995 999999999999 89999999999999999999876643334 6677666 33
Q ss_pred cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885 102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180 (483)
Q Consensus 102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC 180 (483)
..++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++|||
T Consensus 78 -------------------~~~~~w~W~dg~~~~~--~~W~~g~P~-----~C~~~~~~~~~g~W~~~~C~--~~~~~IC 129 (135)
T 1umr_A 78 -------------------EKQCSTKWSDGSSVSY--DNLLDLYIT-----KCSLLKKETGFRKWFVASCI--GKIPFVC 129 (135)
T ss_dssp -------------------SSSSCCBCTTSCBCCC--CCBCGGGCC-----CEEEEEGGGTTCSBEEECTT--CCEEEEE
T ss_pred -------------------CCCCccCcCCCCeecc--cccCCCCCC-----ccEEEecCCCCCeEecCCCC--CCCcEEe
Confidence 2468899999999876 78999 996 99999876543469999999 9999999
Q ss_pred ecch
Q psy14885 181 EASI 184 (483)
Q Consensus 181 e~~~ 184 (483)
|+++
T Consensus 130 e~~~ 133 (135)
T 1umr_A 130 KFPP 133 (135)
T ss_dssp EECC
T ss_pred CccC
Confidence 9974
No 18
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}
Probab=99.91 E-value=5.9e-25 Score=186.60 Aligned_cols=120 Identities=19% Similarity=0.401 Sum_probs=104.1
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++. ..||||+++..
T Consensus 1 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~------~~~WiGl~~~~------- 66 (122)
T 2c6u_A 1 SPCDTNWRYYGDSCYGFFRHN-LTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH------LIRWVGLSRQK------- 66 (122)
T ss_dssp CCSCTTEEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC------SCEEEEEECSS-------
T ss_pred CCCCccceEeCCEEEEEECCc-CCHHHHHHHHHhCCCeEeeECCHHHHHHHHHhhc------CCEEEEeeecC-------
Confidence 369999999999999999995 9999999999999999999999999999998874 24566666432
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ +|.+ +|++.+.++|+.+. . +.|++.+|+ ..++||||+++
T Consensus 67 ---------------~~~~~~W~dg~~~~~---~W~~~~P~~~~~~~C~~~~--~--g~w~~~~C~--~~~~~ICe~~~ 121 (122)
T 2c6u_A 67 ---------------SNEVWKWEDGSVISE---NMFEFLEDGKGNMNCAYFH--N--GKMHPTFCE--NKHYLMCERKA 121 (122)
T ss_dssp ---------------TTSCCBCTTSCBCCG---GGGGGBCCCCTTCCEEEEE--T--TEEEEECTT--SCEEEEEEEEC
T ss_pred ---------------CCCCeEeCCCCccCc---CcccCCCCCCCCCCeeEEc--C--CeEEeccCC--CCceEeeeecC
Confidence 468899999999874 7999 99987678999994 2 369999999 99999999974
No 19
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.91 E-value=1.1e-24 Score=186.97 Aligned_cols=127 Identities=20% Similarity=0.369 Sum_probs=106.5
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|+++||+++... ++|.+|+..|+++ ||+||+|++++|++||..++..... ...||||+++..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~----- 74 (131)
T 3ubu_A 2 VDCLPGWSAYDQSCYRVFKLL-KTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENKQ-TDNVWLGLKIQS----- 74 (131)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTCCEECCCCSHHHHHHHHHHHHHTTC-CSCEEEEEEEEC-----
T ss_pred cCCCccCEecCCEeeEEcCCC-cCHHHHHHHHhccCCCceEceeCCHHHHHHHHHHHHhcCC-CCCEEEeEecCC-----
Confidence 479999999999999999995 9999999999998 8999999999999999999876532 236677776543
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
...++.|.|+||+++.+ .+|.+ +| ++|+.+....+...|++.+|+ ..++||||++
T Consensus 75 ---------------~~~~~~~~W~dg~~~~~--~~w~~~~~-----~~Cv~~~~~~~~~~W~~~~C~--~~~~fiCe~~ 130 (131)
T 3ubu_A 75 ---------------KGQQCSTEWTDGSSVSY--ENFSEYQS-----KKCFVLEKNTGFRTWLNLNCG--SEYSFVCKSP 130 (131)
T ss_dssp ---------------SSSSSCCBCTTSCBCCC--CCBCTTTC-----CCEEEECGGGTSCSEEEECTT--CCEEEEEEEC
T ss_pred ---------------CCCCCceEeCCCCccce--eccCCCCC-----CCcEEEeCCCCCCeEcCCCCC--CCceeEEecC
Confidence 01268899999999976 78988 65 689999876553469999999 9999999998
Q ss_pred h
Q psy14885 184 I 184 (483)
Q Consensus 184 ~ 184 (483)
+
T Consensus 131 p 131 (131)
T 3ubu_A 131 P 131 (131)
T ss_dssp C
T ss_pred C
Confidence 4
No 20
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A
Probab=99.91 E-value=9.6e-25 Score=187.97 Aligned_cols=126 Identities=16% Similarity=0.292 Sum_probs=107.1
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHh-HHHHHHHHhhhcCCC-CCceeeecc--cCCCC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDAD-EHGFIMYQLFWQDPQ-RRKWYFGGT--QQSPN 101 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~-e~~~l~~~~~~~~~~-~~~~wig~~--~~~~~ 101 (483)
+||+||+.|++.||+++... ++|.+|+..|+. .||+|++|+|.+ |++||..++...... ...||||++ +..
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~-- 77 (133)
T 1fvu_A 1 DCPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVENKE-- 77 (133)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCTTSTHHHHHHHHHHHHCCSSCCEEEEEEEECCSS--
T ss_pred CcCCCcEEcCCeeEEEECCC-cCHHHHHHHHhccCCCcEEeeecChHHHHHHHHHHHhhccccCCCCEEEeeecccCC--
Confidence 59999999999999999995 999999999999 799999999999 999999998765432 466777776 432
Q ss_pred cccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ .+|.++|+ ++|+.+....+.+.|++.+|+ ..++||||
T Consensus 78 --------------------~~~~w~W~dg~~~~~--~~W~~~P~----~~C~~~~~~~~~~~w~~~~C~--~~~~fICe 129 (133)
T 1fvu_A 78 --------------------KQCSSEWSDGSSVSY--ENVVERTV----KKCFALEKDLGFVLWINLYCA--QKNPFVCK 129 (133)
T ss_dssp --------------------SSSCCBCTTSCBCCC--CCBCGGGC----CCEEEEETTTTSCSEEEECTT--CCEEEEEE
T ss_pred --------------------CCCccEeCCCCcccc--cCcccCCC----CCcEEEEecCCCCeEecCCCC--CCCCEEee
Confidence 467899999999875 78987555 799999876543469999999 99999999
Q ss_pred cch
Q psy14885 182 ASI 184 (483)
Q Consensus 182 ~~~ 184 (483)
+++
T Consensus 130 ~~~ 132 (133)
T 1fvu_A 130 SPP 132 (133)
T ss_dssp ECC
T ss_pred ecC
Confidence 984
No 21
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Probab=99.91 E-value=1.6e-24 Score=188.44 Aligned_cols=125 Identities=26% Similarity=0.484 Sum_probs=106.8
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
..||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++. ....||||+++..
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~~WIGl~~~~------- 70 (140)
T 2ox9_A 3 NGCPPHWKNFTDKCYYFSLEK-EIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTV----GRESHWIGLTDSE------- 70 (140)
T ss_dssp -CCCTTCEEETTEEEEECSCC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHTCC----SSSCEEEEEECSS-------
T ss_pred CCCCcCceEcCCEEEEEECCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhc----CCCCEEeeeEeCC-------
Confidence 579999999999999999984 9999999999999999999999999999999874 2455666666432
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-----ccCCeEEEecccccccccccccCCCCceeeee
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-----VQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-----~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC 180 (483)
.++.|.|+||+++.+ .+|.+ +|++. ..++|+.+... +.|++.+|+ ..++|||
T Consensus 71 ---------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fIC 128 (140)
T 2ox9_A 71 ---------------QESEWKWLDGSPVDY--KNWKAGQPDNWGSGHGPGEDCAGLIYA---GQWNDFQCD--EINNFIC 128 (140)
T ss_dssp ---------------STTCCEETTSCBCCS--CCBCTTCCCCTTTTTSSCCCEEEECGG---GCEEEECTT--SCBEEEE
T ss_pred ---------------CCCceEeCCcCcCCc--cCcCCcCCCCcccCCCCCCCCceECCC---CeEeccCCC--CCceeEE
Confidence 468899999999875 88999 99874 46899999753 369999999 9999999
Q ss_pred ecchh
Q psy14885 181 EASIQ 185 (483)
Q Consensus 181 e~~~~ 185 (483)
|+++.
T Consensus 129 e~~~~ 133 (140)
T 2ox9_A 129 EKERE 133 (140)
T ss_dssp EEECC
T ss_pred eecCC
Confidence 99863
No 22
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1
Probab=99.91 E-value=1.5e-24 Score=185.90 Aligned_cols=124 Identities=19% Similarity=0.425 Sum_probs=105.9
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++. ..||||+++..
T Consensus 4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~------ 70 (130)
T 1tdq_B 4 QEQCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ------DYQWIGLNDRT------ 70 (130)
T ss_dssp -CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC------SCEEEEEECSS------
T ss_pred ccCCCcccEEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhccC------CCEEEeeecCC------
Confidence 4679999999999999999995 9999999999999999999999999999998873 35677766432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc--ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~--~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++.+ .+|.+ +|++. ..++|+.+..... +.|++.+|+ ..++||||+
T Consensus 71 ----------------~~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~~C~~~~~~~~-~~w~~~~C~--~~~~fICe~ 129 (130)
T 1tdq_B 71 ----------------IEGDFRWSDGHSLQF--EKWRPNQPDNFFATGEDCVVMIWHER-GEWNDVPCN--YQLPFTCKK 129 (130)
T ss_dssp ----------------STTCCEETTCCCCCC--CCBCTTCCCCCSTTTEEEEEEETTTT-TEEEEEETT--SCEEEEEEE
T ss_pred ----------------CCCEEEecCCCcCCc--cccCCCCCCCccCCCCCeEEEccCCC-CcccCcCCC--CCeeeeeec
Confidence 467899999999875 78999 99874 4689999975433 469999999 999999998
Q ss_pred c
Q psy14885 183 S 183 (483)
Q Consensus 183 ~ 183 (483)
+
T Consensus 130 ~ 130 (130)
T 1tdq_B 130 G 130 (130)
T ss_dssp C
T ss_pred C
Confidence 4
No 23
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A*
Probab=99.91 E-value=1.9e-24 Score=184.95 Aligned_cols=123 Identities=21% Similarity=0.380 Sum_probs=105.6
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNL 102 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~ 102 (483)
+||+||+.|++.||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++........ .||||++ +..
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~--- 76 (129)
T 1j34_A 1 DCPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKE--- 76 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCCTTCCEEEEEEECSSC---
T ss_pred CCCCCcEEeCCEEEEEECCC-CCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHhhcccCCCCCEEEeeecCCCC---
Confidence 59999999999999999995 999999999999 89999999999999999999876643334 6777776 432
Q ss_pred ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++||||
T Consensus 77 -------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~fiCe 128 (129)
T 1j34_A 77 -------------------KQCSSEWSDGSSVSY--ENWIEAESK-----TCLGLEKETGFRKWVNIYCG--QQNPFVCE 128 (129)
T ss_dssp -------------------SCSCCBCTTSCBCCC--CCBCGGGSC-----CEEEECGGGTTCSBEEECTT--SCEEEEEE
T ss_pred -------------------CCCceEECCcCccce--eccCCCCCC-----cceEEEccCCCCeEccCCCC--CCCceEee
Confidence 468899999999876 78999 997 89999876543469999999 99999999
Q ss_pred c
Q psy14885 182 A 182 (483)
Q Consensus 182 ~ 182 (483)
+
T Consensus 129 ~ 129 (129)
T 1j34_A 129 A 129 (129)
T ss_dssp C
T ss_pred C
Confidence 6
No 24
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.91 E-value=1.3e-24 Score=187.42 Aligned_cols=125 Identities=20% Similarity=0.309 Sum_probs=105.6
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCC-ceeeecc--cCCCCc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRR-KWYFGGT--QQSPNL 102 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~-~~wig~~--~~~~~~ 102 (483)
.||+||+.|+++||+++... ++|.+|+..|++ .||+|++|+|++|++||..++........ .||||++ +..
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~--- 77 (134)
T 2e3x_B 2 DCPPDSSLYRYFCYRVFKEH-KTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTGKFITHFWIGLMIKDKE--- 77 (134)
T ss_dssp CCTTTSEEETTEEEEEEEEE-EEHHHHHHHHTSTTTTCCBCCCCSHHHHHHHHHHHHTCC----CEEECCEEECSSC---
T ss_pred CCCCCCEEeCCEeeEEeCCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhccCCCCCEEEeeeecCCC---
Confidence 69999999999999999995 999999999999 89999999999999999999876543334 6677766 332
Q ss_pred ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++||||
T Consensus 78 -------------------~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~w~~~~C~--~~~~~ICe 129 (134)
T 2e3x_B 78 -------------------QECSSEWSDGSSVSY--DKLGKQEFR-----KCFVLEKESGYRMWFNRNCE--ERYLFVCK 129 (134)
T ss_dssp -------------------TTTTCCCTTSCCCCC--CCBCGGGCC-----CEEEEEGGGTTCCBEEECTT--SEEEEEEE
T ss_pred -------------------CCCccEeCCCCcccc--cccCCCCCC-----CeEEEEecCCCCcCCCCCCC--CCcceEeC
Confidence 468899999999876 78999 997 89999876543469999999 99999999
Q ss_pred cch
Q psy14885 182 ASI 184 (483)
Q Consensus 182 ~~~ 184 (483)
+++
T Consensus 130 ~~~ 132 (134)
T 2e3x_B 130 VPP 132 (134)
T ss_dssp ECC
T ss_pred ccC
Confidence 974
No 25
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A
Probab=99.91 E-value=2e-24 Score=186.76 Aligned_cols=126 Identities=17% Similarity=0.320 Sum_probs=105.9
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCC-C-Cceeeecc--cCCC
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ-R-RKWYFGGT--QQSP 100 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~-~-~~~wig~~--~~~~ 100 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++...... . ..||||++ +.
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WIGl~~~~~-- 79 (136)
T 3bx4_A 3 EDCDFGWSPYDQHCYQAFNEQ-KTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLRAQNK-- 79 (136)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTTCEECCCCSHHHHHHHHHHHHTCGGGTTCCEEEEEEEECCC--
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhcccCccCCEEEeeeccCC--
Confidence 469999999999999999995 999999999999 899999999999999999998654211 1 45677666 32
Q ss_pred CcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeee
Q psy14885 101 NLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI 179 (483)
Q Consensus 101 ~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fv 179 (483)
..++.|.|+||+++.+ .+|.+ +|+ +|+.+....+.+.|++.+|+ ..++||
T Consensus 80 --------------------~~~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~fI 130 (136)
T 3bx4_A 80 --------------------EQQCSSEWSDGSSVSY--ENLIDLHTK-----KCGALEKLTGFRKWVNYYCE--QMHAFV 130 (136)
T ss_dssp --------------------SSSSCCBCTTSCBCCC--CCCTTCCCC-----CEEEEEGGGTTTSEEEECTT--SCEEEE
T ss_pred --------------------CCCCceEeCCCCccCc--ccccCCCCC-----ccEEEEecCCCCeEeCCCCC--CCcceE
Confidence 2468899999999876 78999 997 89999876543469999999 999999
Q ss_pred eecch
Q psy14885 180 CEASI 184 (483)
Q Consensus 180 Ce~~~ 184 (483)
||+++
T Consensus 131 Ce~~~ 135 (136)
T 3bx4_A 131 CKLLP 135 (136)
T ss_dssp EEECC
T ss_pred EeecC
Confidence 99973
No 26
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A
Probab=99.91 E-value=1.9e-24 Score=186.07 Aligned_cols=126 Identities=17% Similarity=0.337 Sum_probs=107.6
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCC-CCceeeecc--cCCCCc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ-RRKWYFGGT--QQSPNL 102 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~-~~~~wig~~--~~~~~~ 102 (483)
+||+||+.|++.||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++...... ...||||++ +..
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~--- 76 (133)
T 1sb2_A 1 DCPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIENKG--- 76 (133)
T ss_dssp CCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHTSSSCCEECCCSSHHHHHHHHHHHHHHTTTCCEEEEEEEEEECSS---
T ss_pred CcCCCcEEcCCEeEEEECCc-CCHHHHHHHHhhhCCCcEEeeECCHHHHHHHHHHHHhhccCccCCEEEeeeccCCC---
Confidence 59999999999999999995 999999999999 899999999999999999998765432 466777776 432
Q ss_pred ccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++.+ .+|.++| .++|+.+....+.+.|++.+|+ ..++||||+
T Consensus 77 -------------------~~~~~~W~dg~~~~~--~~W~~~P----~~~C~~~~~~~~~~~w~~~~C~--~~~~fICe~ 129 (133)
T 1sb2_A 77 -------------------QRSNLEWSDGSSISY--ENLYEPY----MEKCFLMDHQSGLPKWHTADCE--EKNVFMCKF 129 (133)
T ss_dssp -------------------TTSSEEETTCCCCCC--CCBSSCC----CEEEEEEEESSSSCEEEEECTT--SCEEEEEEE
T ss_pred -------------------CCCceEECCCCcccc--cccCcCC----CCCcEEEEecCCCCeEccCCCC--CCceeEecc
Confidence 478899999999875 7898766 5899999876543469999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 130 ~~ 131 (133)
T 1sb2_A 130 QL 131 (133)
T ss_dssp EC
T ss_pred cC
Confidence 85
No 27
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=99.91 E-value=4e-24 Score=182.88 Aligned_cols=120 Identities=27% Similarity=0.495 Sum_probs=101.9
Q ss_pred CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD 108 (483)
Q Consensus 29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~ 108 (483)
||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++. ...||||+++
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~----------- 63 (128)
T 1dv8_A 1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG-----PVNTWMGLHD----------- 63 (128)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEEC-----------
T ss_pred CCCcceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEcccCCHHHHHHHHHhhC-----CCCEEeeEEc-----------
Confidence 9999999999999999995 9999999999999999999999999999999884 2355666653
Q ss_pred ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc------ccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN------VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~------~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.....+|.+ +|++. +.++|+.+... +.|++.+|+ ..++||||
T Consensus 64 -------------~~~~~~W~dg~~~~~~~~~W~~g~P~~~~~~~~~~~~~C~~~~~~---g~W~~~~C~--~~~~fICe 125 (128)
T 1dv8_A 64 -------------QNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDD---GRWNDDVCQ--RPYRWVCE 125 (128)
T ss_dssp -------------TTSSCEETTCCCSTTSCCCBCTTCCCCCCTTSSSSCCCEEEECTT---SCEEEECTT--SCBEEEEE
T ss_pred -------------CCCcEEeCCCCcCCcccccCCCCCCCCcccccCCCCCcCceecCC---CcCCCccCC--CCcceeee
Confidence 2578999999988311289999 99873 46899999643 369999999 99999999
Q ss_pred cc
Q psy14885 182 AS 183 (483)
Q Consensus 182 ~~ 183 (483)
++
T Consensus 126 ~~ 127 (128)
T 1dv8_A 126 TE 127 (128)
T ss_dssp EE
T ss_pred eC
Confidence 86
No 28
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Probab=99.91 E-value=2.7e-24 Score=190.62 Aligned_cols=128 Identities=23% Similarity=0.390 Sum_probs=106.1
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++. ...||||+++..
T Consensus 20 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~------ 87 (156)
T 3c22_A 20 LQVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG-----GLIYWIGLTKAG------ 87 (156)
T ss_dssp ----CCCCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT-----TCCEEEEEEEET------
T ss_pred hccCCCCCEEcCCEEEEEECCC-CCHHHHHHHHHhCCCEEeecCCHHHHHHHHHhhc-----CCcEEEeeeccC------
Confidence 5679999999999999999994 9999999999999999999999999999999873 345677666432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccc--cccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL--DAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~--~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+. ..+|.+ +|++. +.++|+.+.... .+.|+|.+|+ ..++||||
T Consensus 88 ----------------~~~~w~W~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~-~~~W~d~~C~--~~~~fICe 148 (156)
T 3c22_A 88 ----------------MEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS-LQAWNDAPCD--KTFLFICK 148 (156)
T ss_dssp ----------------TTTEEEETTCCCCCHHHHGGGBCTTCCCCGGGCCCEEEECSSS-SSCEEEECTT--SCBEEEEE
T ss_pred ----------------CCCceEeCCCCccccccccCcCCCCCCCCCCCCCCceEECCCC-CCcEECCCCC--CCeeEEEe
Confidence 4688999999998751 278999 99875 468999997653 2469999999 99999999
Q ss_pred cch
Q psy14885 182 ASI 184 (483)
Q Consensus 182 ~~~ 184 (483)
+++
T Consensus 149 ~~~ 151 (156)
T 3c22_A 149 RPY 151 (156)
T ss_dssp EEC
T ss_pred eCC
Confidence 985
No 29
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.91 E-value=3.1e-24 Score=184.26 Aligned_cols=128 Identities=17% Similarity=0.303 Sum_probs=106.5
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++.........||||+++..
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------ 73 (131)
T 1oz7_A 1 MCPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIWTGLSERS------ 73 (131)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCCCSEEEEEEEECC------
T ss_pred CcCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhcCCCCEECccCCHHHHHHHHHHHHhhcCCCCCEEEeeeCCC------
Confidence 59999999999999999995 999999999999 899999999999999999998766433566777776432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~ 185 (483)
...++.|.|+||+++.+ .+|.++|+ +|+.+....+.+.|++.+|+ ..++||||++++
T Consensus 74 --------------~~~~~~~~W~dg~~~~~--~~W~~~P~-----~Cv~~~~~~~~~~w~~~~C~--~~~~fICe~~~p 130 (131)
T 1oz7_A 74 --------------KEQHCSSRWSDGSFFRS--YEIAIRYS-----ECFVLEKQSVFRTWVATPCE--NTFPFMCKYPVP 130 (131)
T ss_dssp --------------CGGGSCCBCSSSBCCSC--CCCCCSCC-----CEEEEEGGGTTCSEEEECTT--SCEEEEEEECTT
T ss_pred --------------CCCCCceEECCCCeecc--ccccCCCC-----CeEEEEccCCCCeEeecCCC--CCCcEEeeecCC
Confidence 00357899999999875 78987554 99999876543469999999 999999999853
No 30
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B
Probab=99.91 E-value=1.7e-24 Score=184.25 Aligned_cols=121 Identities=21% Similarity=0.353 Sum_probs=99.1
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
.||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++..... ...||||++
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~--------- 69 (125)
T 1fvu_B 1 DCPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLK-GDVVWIGLS--------- 69 (125)
T ss_dssp CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHTTCTTSCT-TCCEECSCC---------
T ss_pred CcCCccEEcCCEEEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHHhcCC-CCCEEEeee---------
Confidence 59999999999999999995 999999999999 89999999999999999998864421 344555554
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
+ ...++.|.|+||+++.+ .+|.+ +|+ +|+.+....+ .|++.+|+ ..++||||++
T Consensus 70 --~-----------~~~~~~~~W~dg~~~~~--~~w~~~~P~-----~C~~~~~~~g--~w~~~~C~--~~~~~iCe~~ 124 (125)
T 1fvu_B 70 --D-----------VWNKCRFEWTDGMEFDY--DDYYLIAEY-----ECVASKPTNN--KWWIIPCT--RFKNFVCEFQ 124 (125)
T ss_dssp --C-----------CSTTSCEEETTSCCCCC------CCSCC-----EEEEEETTTT--EEEEEETT--SCEEEEEEEC
T ss_pred --e-----------cCCCCceEecCCCccCc--cccCCCCCC-----CceEEECCCC--cEeCCcCC--CCCcEEEeec
Confidence 3 22468899999999876 78999 986 9999986544 69999999 9999999987
No 31
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B
Probab=99.90 E-value=3.1e-24 Score=183.93 Aligned_cols=122 Identities=20% Similarity=0.307 Sum_probs=104.1
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcC-CCCCceeeecccCCCCcc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLW 103 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~-~~~~~~wig~~~~~~~~W 103 (483)
..||+||+.|++.||+++... ++|.+|+..|++ .||+|++|+|.+|++||..++.... .....||||++
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiGl~------- 73 (129)
T 1sb2_B 2 FRCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLT------- 73 (129)
T ss_dssp CCCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC---CCCEEEEEE-------
T ss_pred CCCCCCCEEeCCEeEEEECCC-cCHHHHHHHHhhcCCCceECccCCHHHHHHHHHHHHhhcccCCCCEeEeec-------
Confidence 469999999999999999995 999999999999 8999999999999999999987653 22456666666
Q ss_pred cccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
++.|.|+||+++.+ .+|.+ +|+ +|+.+....+...|++.+|+ ..++||||+
T Consensus 74 -------------------~~~~~W~dg~~~~~--~~W~~~~P~-----~C~~~~~~~~~~~W~~~~C~--~~~~fICe~ 125 (129)
T 1sb2_B 74 -------------------ERNLKWTNGASVSY--ENLYEPYIR-----KCFVVQPWEGKSKWYKADCE--EKNAFLCKF 125 (129)
T ss_dssp -------------------ECCCBCTTSCBCCS--CCBSSCCCC-----CEEEEEEETTEEEEEEECTT--SCEEEEEEE
T ss_pred -------------------CCccEECCCCcccc--cccCCCCCC-----CeEEEEecCCCCeEeCcCCC--CCcceEecc
Confidence 25689999999875 78999 997 99999876543469999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 126 ~~ 127 (129)
T 1sb2_B 126 PK 127 (129)
T ss_dssp EC
T ss_pred cC
Confidence 85
No 32
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.90 E-value=1.8e-24 Score=183.99 Aligned_cols=121 Identities=21% Similarity=0.377 Sum_probs=101.1
Q ss_pred CcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
||+||+.|+++||+++... ++|.+|+..|+.+ ||+||+|+|.+|++||..++..... ...+|||++
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~---------- 68 (124)
T 3gpr_D 1 CPLHWSSYNGYCYRVFSEL-KTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLK-YTSMWLGLN---------- 68 (124)
T ss_dssp CCSSCCCSSSEEEEEEEEE-EESHHHHHHHHHHSTTCBSCCCCSHHHHHHHHHHHHHSCS-SCCBCCSEE----------
T ss_pred CCCcceecCCEeEEEeCCC-cCHHHHHHHHHhcCCCCEEcccCCHHHHHHHHHHHHhcCC-CCCEEEEeE----------
Confidence 9999999999999999995 9999999999999 9999999999999999999875521 134455444
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
+ ...++.|.|+||+++.+ .+|.++| +|+.+....+.+.|++.+|+ ..++||||++
T Consensus 69 -~-----------~~~~~~~~W~dg~~~~~--~~W~~~p------~C~~~~~~~~~~~W~~~~C~--~~~~fiCe~p 123 (124)
T 3gpr_D 69 -N-----------AWAACKWEWSDDAKLDY--KVWLRRA------YCAVMVVKTDRIFWYNRGCE--KTVSFLCKFY 123 (124)
T ss_dssp -C-----------CSSCSSCSSSSCCCSCC--BCCCSCC------CEECCBCCSSSCBBCEECTT--SEEEEEEEEE
T ss_pred -c-----------CCCCCceEECCCCcccc--cccCCCC------CcEEEEcCCCCCcEeCCCCC--CCccEEeeec
Confidence 3 22568899999999875 7897632 99999876543479999999 9999999996
No 33
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=99.90 E-value=4.7e-24 Score=183.93 Aligned_cols=125 Identities=20% Similarity=0.365 Sum_probs=108.7
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...++.+|+.|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++. ..||||+++..
T Consensus 7 ~~~~~~~~~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~------ 73 (133)
T 2zib_A 7 ALVCPAGWTLHGQRCFYSEATA-MTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVA------GIVWIGGSACK------ 73 (133)
T ss_dssp CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHCS------SCEEEEEECCS------
T ss_pred eeeCCCCEEEeCCEEEEEECCc-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHhhc------cCEEEccEecC------
Confidence 4678899999999999999995 9999999999999999999999999999999884 56777776532
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ .+|.+ +|++..+++|+.+....+. .|++.+|+ ..++||||+++
T Consensus 74 ----------------~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~Cv~~~~~~~~-~W~d~~C~--~~~~fICe~~~ 132 (133)
T 2zib_A 74 ----------------VAGAWSWTDGTPVDY--RTWCPTKPNDILSDCCMQMTAAVDK-CWDDLPCP--ASHASICAKAA 132 (133)
T ss_dssp ----------------STTCCEETTCCCCCC--CCBCTTCCCCCTTSCEEEECSSTTC-CEEEECTT--CCEEEEEEEEC
T ss_pred ----------------CCCceEECCCCCccc--CCcCCCCCCCCCCCCceEEecCCCC-cEeCCCCC--CCeeEEEeEcC
Confidence 468899999999965 88999 9998656899999766443 69999999 99999999974
No 34
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=99.90 E-value=4.4e-24 Score=194.29 Aligned_cols=127 Identities=23% Similarity=0.371 Sum_probs=108.2
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++. ...||||+++..
T Consensus 47 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~------- 113 (182)
T 3kqg_A 47 QVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG-----GLIYWIGLTKAG------- 113 (182)
T ss_dssp HHHTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT-----TCCEEEEEEECS-------
T ss_pred ccCCCCCEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC-----CCcEEEEeEccC-------
Confidence 459999999999999999995 9999999999999999999999999999998873 235677776533
Q ss_pred CcccccccccCCcCCCCCccccCCCCcccc---ccccCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNE---LDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~---~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ | .+|.+ +|++.+ .++|+.+...+. +.|+|.+|+ ..++||||
T Consensus 114 ---------------~~~~w~W~dG~~~~~~~~~-~~W~~geP~~~~~~~~Cv~~~~~~~-~~W~d~~C~--~~~~fICe 174 (182)
T 3kqg_A 114 ---------------MEGDWSWVDDTPFNKVQSA-RFWIPGEPNNAGNNEHCGNIKAPSL-QAWNDAPCD--KTFLFICK 174 (182)
T ss_dssp ---------------TTCCEEETTCCCCCHHHHT-TTBCTTCCCCTTSCCCEEEECSSSS-SCEEEECTT--SCBEEEEE
T ss_pred ---------------CCCceEeCCCCcccccccc-CCCCCCCCCCCCCCCCeeEEecCCC-CCEeCcCCC--CCeeEEec
Confidence 468899999999873 3 88999 998754 589999976432 369999999 99999999
Q ss_pred cchh
Q psy14885 182 ASIQ 185 (483)
Q Consensus 182 ~~~~ 185 (483)
+++.
T Consensus 175 ~~~~ 178 (182)
T 3kqg_A 175 RPYV 178 (182)
T ss_dssp EECC
T ss_pred cCCC
Confidence 9853
No 35
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.90 E-value=2.1e-24 Score=186.14 Aligned_cols=126 Identities=16% Similarity=0.347 Sum_probs=103.9
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhc--CCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~--g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
.||+||+.|+++||+++... ++|.+|+..|+++ ||+||+|+|.+|++||..++...... ....+|||
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~----------~~~~~WIG 70 (134)
T 3gpr_C 2 NCLPGWSAYDQHCYQAFNEP-KTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKR----------PELYVWIG 70 (134)
T ss_dssp CCCTTCEESSSCEEEECSCC-BCSHHHHHHHTTSSSCCEECCCCCHHHHHHHHHHHHHHHCS----------SCCBCCCS
T ss_pred cCCCcceeeCCEEEEEeCCC-cCHHHHHHHHHhhCCCceEeeeCCHHHHHHHHHHHHhhccC----------CCCcEEEe
Confidence 59999999999999999995 9999999999998 89999999999999999998755211 01235555
Q ss_pred cCcccccccccCCcCCCCCc-c-ccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 106 EDDPQRRKWYFGGTQQSPNL-W-VNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~-~-~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
+++ ...++. | .|+||+++.+ .+|.+ +| ++|+.+....+...|++.+|+ ..++||||+
T Consensus 71 l~~-----------~~~~~~~w~~W~dG~~~~~--~~W~~~~~-----~~Cv~~~~~~~~~~W~~~~C~--~~~~fICe~ 130 (134)
T 3gpr_C 71 LRD-----------RRKEQQCSSEWSMSASIIY--VNWNTGES-----QMCQGLARWTGFRKWDYSDCQ--AKNPFVCKF 130 (134)
T ss_dssp CBC-----------CSSTTSCSCEETTCCCSCC--BCBSSCEE-----CCEECCBCSSSSCBBCEECTT--CCBCCEEEE
T ss_pred eEe-----------cCCCCCcCCEeCCcCcccc--cccCCCCC-----CcceEEeccCCCCcCcCCCCC--CCCcEEeCc
Confidence 544 225778 9 9999999976 78987 65 689999865543479999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 131 ~~ 132 (134)
T 3gpr_C 131 SS 132 (134)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 36
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.90 E-value=4.2e-24 Score=194.44 Aligned_cols=129 Identities=16% Similarity=0.282 Sum_probs=110.9
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||.||. |+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.........||||+++..
T Consensus 48 ~~~Cp~gw~-~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~------ 119 (182)
T 1htn_A 48 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMA------ 119 (182)
T ss_dssp HHHHHHSEE-ETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCSSCEEEEEEECSS------
T ss_pred cCCCCCCcE-ECCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHhccCCCCcEEEeeECCC------
Confidence 357999999 899999999995 999999999999999999999999999999998766444567777776543
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCC---C-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFL---P-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~---~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+ .+|. + +|++.+.++|+.+..... +.|+|.+|+ ..++||||
T Consensus 120 ----------------~~g~w~W~dG~~~~y--~nW~~~~~geP~~~~~~~Cv~l~~~~~-g~W~d~~C~--~~~~fICe 178 (182)
T 1htn_A 120 ----------------AEGTWVDMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN-GKWFDKRCR--DQLPYICQ 178 (182)
T ss_dssp ----------------STTCCBCTTSCBCCC--CCBCCSSSCSCCCTTTCCEEEEETTTT-TEEEEECTT--SCEEEEEE
T ss_pred ----------------CCCeEEeCCCCCccC--CCCCCCCCCcCCCCCCCCCEEEccCCC-CCEECCCCC--CCeeEEEE
Confidence 468899999999975 8999 9 999866789999975333 469999999 99999999
Q ss_pred cc
Q psy14885 182 AS 183 (483)
Q Consensus 182 ~~ 183 (483)
++
T Consensus 179 ~~ 180 (182)
T 1htn_A 179 FG 180 (182)
T ss_dssp EE
T ss_pred Ee
Confidence 97
No 37
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A*
Probab=99.90 E-value=2.4e-24 Score=191.25 Aligned_cols=130 Identities=19% Similarity=0.394 Sum_probs=110.1
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--c---------CCcccccCCHhHHHHHHHHhhhcCC----CC--C
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--L---------DSDLANVNDADEHGFIMYQLFWQDP----QR--R 89 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~---------g~~L~~i~s~~e~~~l~~~~~~~~~----~~--~ 89 (483)
..||+||+.|+++||+++... ++|.+|+..|+. . ||+||+|+|.+|++||..++..... .. .
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~ 81 (157)
T 3alu_A 3 TSCPPLWTGFNGKCFRLFHNH-LNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFLTELVKTSLPDLITGGWAP 81 (157)
T ss_dssp CEECTTCEEETTEEEEEEEEE-ECHHHHHHHHTTEEEEETTSCEEEECEECCCCSHHHHHHHHHHHHHHCGGGCCSSSCS
T ss_pred CCCCCCcEeeCCEEEEEECCc-cCHHHHHHHhhccccccccCCCCCCeEEcccCCHHHHHHHHHHHHhcccccccccCCC
Confidence 579999999999999999995 999999999999 8 9999999999999999999876532 12 5
Q ss_pred ceeeecccCCCCcccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcc-cCCeEEEecccccccccc
Q psy14885 90 KWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNV-QRDYLAYSFSQSLKRWGF 167 (483)
Q Consensus 90 ~~wig~~~~~~~~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~ 167 (483)
.||||+++.. .++.|.|+||+++.+ .+|.+ +|++.. .++|+.+....+ +.|++
T Consensus 82 ~~WIGl~~~~----------------------~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~~Cv~~~~~~~-~~W~d 136 (157)
T 3alu_A 82 QVYIGMKVGS----------------------TNSDQTWTDGSSVDY--DGWVSGEPNNGPNSRGAIAAGDYSR-GFWAD 136 (157)
T ss_dssp EEEEEEEECS----------------------STTCEEETTCCCCCC--CCBCTTCCCSCSSEEEEEECSTTTT-TCEEE
T ss_pred CEEEeeeeCC----------------------CCCCeEeCCCCCCCc--cCcCCCCCCCCCCCCCeEEEecCCC-CeEcC
Confidence 5666665432 468899999999875 88999 998753 689999976543 46999
Q ss_pred cccCCCCceeeeeecch
Q psy14885 168 ERVTGMEPLLFICEASI 184 (483)
Q Consensus 168 ~~C~~~~~~~fvCe~~~ 184 (483)
.+|+ ..++||||+++
T Consensus 137 ~~C~--~~~~fICe~~~ 151 (157)
T 3alu_A 137 VYSN--NNFKYICQLPC 151 (157)
T ss_dssp ECTT--CCEEEEEECCC
T ss_pred CCCC--CccceEecccc
Confidence 9999 99999999985
No 38
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B*
Probab=99.90 E-value=6.3e-24 Score=181.61 Aligned_cols=123 Identities=17% Similarity=0.327 Sum_probs=103.7
Q ss_pred CcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|++|++||..++..... ...||||+++..
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WiGl~~~~------- 71 (128)
T 1ukm_B 1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALK-FTSMWIGLNNPW------- 71 (128)
T ss_dssp CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCS-SCEEEEEEECTT-------
T ss_pred CCCcCEecCCEeEEEECCc-cCHHHHHHHHhccCCccEEcccCCHHHHHHHHHHHHhcCC-cCcEEEecccCC-------
Confidence 9999999999999999995 999999999999 89999999999999999999876532 456777776432
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~ 185 (483)
.++.|.|+||+++.+ .+|..+| +|+.+....+.+.|++.+|+ ..++||||+++.
T Consensus 72 ---------------~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~~~~~w~~~~C~--~~~~fICe~~~~ 125 (128)
T 1ukm_B 72 ---------------KDCKWEWSDNARFDY--KAWKRRP------YCTVMVVKPDRIFWFTRGCE--KSVSFVCKFLTD 125 (128)
T ss_dssp ---------------TTCCEEETTCCCCCC--CCBCCCC------EEEEEEECSSCEEEEEEETT--SCEEEEEEEEC-
T ss_pred ---------------CCCceEeCCCCcccc--CCCCCCC------CcEEEeCCCCCCeEeCCCCC--CCcCeEeeecCC
Confidence 467899999999865 7786444 89999765443579999999 999999999853
No 39
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G
Probab=99.90 E-value=1.7e-24 Score=183.99 Aligned_cols=120 Identities=24% Similarity=0.480 Sum_probs=101.7
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
++.||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..+ ...||||+++..
T Consensus 2 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~-------~~~~WIGl~~~~------ 67 (123)
T 3bdw_A 2 CCSCQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSS-------QQFYWIGLSYSE------ 67 (123)
T ss_dssp CCCCTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSCGGGGGGGTTC-------CCCEECSEEEET------
T ss_pred CCCCCCCceEECCEEEEEeCCC-CCHHHHHHHHHHCCCeeEEECCHHHHHHHHhC-------cCCEEeeeecCC------
Confidence 5789999999999999999995 99999999999999999999999999998764 334555555432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ .+|.+ +|.. .++|+.+... +.|++.+|+ ..++||||+++
T Consensus 68 ----------------~~~~w~W~dg~~~~~--~~w~~~~~~~--~~~C~~~~~~---~~w~d~~C~--~~~~fICe~~~ 122 (123)
T 3bdw_A 68 ----------------EHTAWLWENGSALSQ--YLFPSFETFN--TKNCIAYNPN---GNALDESCE--DKNRYICKQQL 122 (123)
T ss_dssp ----------------TTTEEEETTSCBCCT--TTSGGGGGCC--TTSEEEEETT---TEEEEECTT--SCBEEEEEECC
T ss_pred ----------------CCCcEEeeCCCcCCc--ccccccCCCC--CCCCcEEcCC---CcEEccCCC--CCCeeeEeEec
Confidence 468899999999976 78988 7754 5899999753 369999999 99999999973
No 40
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Probab=99.90 E-value=9.2e-24 Score=184.20 Aligned_cols=128 Identities=20% Similarity=0.335 Sum_probs=105.0
Q ss_pred CcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCc
Q psy14885 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL 102 (483)
Q Consensus 23 ~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~ 102 (483)
.+....||.||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++... ....||||+++..
T Consensus 11 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~~WIGl~~~~--- 84 (142)
T 2bpd_A 11 GGFSQSCLPNWIMHGKSCYLFSFSG-NSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSH--RINAFWIGLSRNQ--- 84 (142)
T ss_dssp ----CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHGGG--TTSEEEEEEECSS---
T ss_pred CCCCCCCCccceecCCEEEEEECCC-CCHHHHHHHHHHcCCEEeeeCCHHHHHHHHHHHhcc--CCCCEEEEeecCC---
Confidence 3446789999999999999999994 999999999999999999999999999999998754 2456777776533
Q ss_pred ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC--CCCC-cccCCeEEEecccccccccccccCCCCceeee
Q psy14885 103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP--EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFI 179 (483)
Q Consensus 103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~--~P~~-~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fv 179 (483)
.++.|.|+||+++.+ .+|.. +|++ .+.++|+.+.. +.|++.+|+ ..++||
T Consensus 85 -------------------~~~~w~W~dg~~~~~--~~w~~~~~~~~~~~~~~Cv~~~~----~~W~d~~C~--~~~~fI 137 (142)
T 2bpd_A 85 -------------------SEGPWFWEDGSAFFP--NSFQVRNAVPQESLLHNCVWIHG----SEVYNQICN--TSSYSI 137 (142)
T ss_dssp -------------------TTSCCEETTSCBCCS--SSCCEECCCCSCCSCCCEEEEET----TEEEEECTT--SCEEEE
T ss_pred -------------------CCCCeEeCCCCcccc--ccccccCCCCCCCCCCCCcEEcC----CeEECcCCC--CCceee
Confidence 467899999999876 67876 3433 24689999963 369999999 999999
Q ss_pred eecc
Q psy14885 180 CEAS 183 (483)
Q Consensus 180 Ce~~ 183 (483)
||++
T Consensus 138 Ce~~ 141 (142)
T 2bpd_A 138 CEKE 141 (142)
T ss_dssp EEEC
T ss_pred eeee
Confidence 9986
No 41
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=99.90 E-value=5.3e-24 Score=181.42 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=102.3
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhh--hcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~--~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|+++||+++... ++|.+|+..|+ ..||+|++|+|++|++||..++.... ....||||+++..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~-~~~~~WiGl~~~~----- 74 (125)
T 1jwi_B 2 EGCLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKM-RIVLVWIGLSHFW----- 74 (125)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHTT-CCCEEEEEEEECG-----
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHhhccCCCceECccCCHHHHHHHHHHHHhcC-CCCCEEEeeecCC-----
Confidence 479999999999999999995 99999999999 89999999999999999999987542 2456677766432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +| |+.+.... +.|++.+|+ ..++||||++
T Consensus 75 -----------------~~~~~~W~dg~~~~~--~~W~~g~p-------C~~~~~~~--~~W~~~~C~--~~~~~iCe~~ 124 (125)
T 1jwi_B 75 -----------------RICPLRWTDGARLDY--RALSDEPI-------CFVAESFH--NKWIQWTCN--RKKSFVCKYR 124 (125)
T ss_dssp -----------------GGSCEEETTCCCCCS--CCSCCSCE-------EEEEETTT--CCEEEEETT--SCEEEEEEEE
T ss_pred -----------------CCCceEeeCcCcCcc--CCcCCCCC-------eEEEECCC--CeEecCCCC--CCCcEEEeEe
Confidence 367899999999875 78988 76 99997643 369999999 9999999986
No 42
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens}
Probab=99.83 E-value=1.5e-25 Score=198.80 Aligned_cols=130 Identities=20% Similarity=0.397 Sum_probs=108.4
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
.||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++.. ...||||+++.
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~----~~~~WIGl~~~--------- 67 (156)
T 2ls8_A 2 VCPIDWRAFQSNCYFPLTDN-KTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDR----RLSYFLGLRDE--------- 67 (156)
Confidence 59999999999999999995 99999999999999999999999999999998852 23345555432
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecchhh
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQK 186 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~~ 186 (483)
..++.|.|+||+++.....+|.+ +|++.+.++|+.+....+...|+|.+|+ ..++||||+++..
T Consensus 68 -------------~~~~~w~W~dG~~~~~~~~~W~~g~P~~~~~~~Cv~l~~~~~~~~W~d~~C~--~~~~fICe~~~~~ 132 (156)
T 2ls8_A 68 -------------NAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCN--FEASRICKIPGTT 132 (156)
Confidence 24688999999988532288999 9998667899999766543469999999 9999999998643
No 43
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*
Probab=99.90 E-value=6e-24 Score=182.08 Aligned_cols=123 Identities=22% Similarity=0.478 Sum_probs=104.9
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCce--eeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKW--YFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~--wig~~~~~~~~Wig 105 (483)
+||+||+.|++.||+++... ++|.+|+..|+++||+|++|+|++|++||..++..... ...+ ||| .
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~~~WiG-~--------- 68 (129)
T 2vuv_A 1 GCPDGWTQFLDLCYIYQSAK-ASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGD-AGSFGPWLG-G--------- 68 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHTTC-CSSSCCEEE-E---------
T ss_pred CCCcchhhhCCEEEEEECCC-cCHHHHHHHHHhcCCEECccCCHHHHHHHHHHHHhccC-CCCcccccC-C---------
Confidence 59999999999999999995 99999999999999999999999999999999876532 2344 555 1
Q ss_pred cCcccccccccCCcCCCCCccccCC-CCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNED-GTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~d-g~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
...++.|.|+| |+++.+ .+|.+ +|++. +.++|+.+...+ |++.+|+ ..++||||+
T Consensus 69 --------------~~~~~~~~W~d~g~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~----w~~~~C~--~~~~~ICe~ 126 (129)
T 2vuv_A 69 --------------QKVGGAWQWSSSGAAFDY--LRWGPNEPNNSGGNEDCLHYNWLS----WNDLRCH--YQASYLCQR 126 (129)
T ss_dssp --------------EEETTEEEETTTCCBCSS--CCBCTTCSCCTTSCCCEEEEETTE----EEEECTT--SCEEEEEEE
T ss_pred --------------CCCCCeEEEcCCCCcccc--CCcCCCCCCCCCCCCCccEEcCCc----ccCCCCC--CCcceEeee
Confidence 12468899999 999965 88999 99875 368999997642 9999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 127 ~~ 128 (129)
T 2vuv_A 127 AA 128 (129)
T ss_dssp EC
T ss_pred cC
Confidence 74
No 44
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Probab=99.90 E-value=1.4e-23 Score=189.57 Aligned_cols=130 Identities=22% Similarity=0.439 Sum_probs=108.6
Q ss_pred cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (483)
Q Consensus 24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W 103 (483)
..+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++.. ....||||+++..
T Consensus 22 ~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~~~~---- 93 (175)
T 2b6b_D 22 RLCHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR---SNRFTWMGLSDLN---- 93 (175)
T ss_pred cccCCCCcCcEEeCCEEEEEECCc-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHhcc---CCCcEEEeeEccC----
Confidence 336789999999999999999995 99999999999999999999999999999987642 2345666665432
Q ss_pred cccCcccccccccCCcCCCCCccccCCCCccccc-cccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL-DAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~-~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.++.|.|+||+++.+. ..+|.+ +|++.+.++|+.+... .|++.+|+ ..++||||
T Consensus 94 ------------------~~~~w~W~dGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe 149 (175)
T 2b6b_D 94 ------------------QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCN--LAKFWICK 149 (175)
T ss_pred ------------------CCCcEEeCCCCCcccccccCCCCCCCCCCCCCCeeEEcCC----ceEccCCC--CCeeEEEE
Confidence 4688999999988741 268999 9988767899999653 29999999 99999999
Q ss_pred cchh
Q psy14885 182 ASIQ 185 (483)
Q Consensus 182 ~~~~ 185 (483)
++..
T Consensus 150 ~~~~ 153 (175)
T 2b6b_D 150 KSAA 153 (175)
T ss_pred ECCC
Confidence 9853
No 45
>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus}
Probab=99.90 E-value=1.9e-23 Score=177.25 Aligned_cols=118 Identities=19% Similarity=0.291 Sum_probs=100.5
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
....||+||+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..++. ...||||+++..
T Consensus 4 ~~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~----- 72 (122)
T 3rs1_A 4 TYAACSKNWTGVGNKCFYFSGYP-RNWTFAQAFCMAQEAQLARFDNEEELIFLKRFKG-----DFDSWIGLHRES----- 72 (122)
T ss_dssp SSSSCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSSHHHHHHHHHHTT-----TSCEEEEEECSS-----
T ss_pred ccCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHhcC-----CCCEEEEEEecC-----
Confidence 46789999999999999999995 9999999999999999999999999999999873 345677776543
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|. .+.++|+.+... .|++.+|. ..++||||+|
T Consensus 73 -----------------~~~~w~W~dg~~~~~--~~w~-----~~~~~C~~~~~~----~w~~~~C~--~~~~fICekp 121 (122)
T 3rs1_A 73 -----------------SEHPWKWTNNTEYNN--MNPI-----LGVGRYAYLSSD----RISSSRSY--INRMWICSKL 121 (122)
T ss_dssp -----------------TTSCCEETTCCBCCC--CSCC-----CSSCSEEEEETT----EEEEECSC--SCBCBEEEEE
T ss_pred -----------------CCCceECCCCCcCCc--cccC-----CCCCceEEEeCC----cEeccccC--CCCCeeeecC
Confidence 468899999999876 6673 235789999653 49999999 9999999997
No 46
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B
Probab=99.90 E-value=7.7e-24 Score=179.78 Aligned_cols=120 Identities=20% Similarity=0.431 Sum_probs=100.7
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++..... ...||||+++.
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------- 71 (123)
T 1j34_B 1 DCPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG-HSIFWMGLSNV------- 71 (123)
T ss_dssp CCCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHC-SCEEECSCCSC-------
T ss_pred CcCCcccccCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhcCC-CCCEEEeeEcC-------
Confidence 59999999999999999995 999999999999 89999999999999999998875421 34555555432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|..+| +|+.+....+ .|++.+|+ ..++||||++
T Consensus 72 ---------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~iCe~~ 122 (123)
T 1j34_B 72 ---------------WNQCNWQWSNAAMLRY--KAWAEES------YCVYFKSTNN--KWRSRACR--MMAQFVCEFQ 122 (123)
T ss_dssp ---------------STTSCEEETTCCCCCC--CCBSCSC------EEEEEETTSC--CBEEEETT--SCEEEEEEEE
T ss_pred ---------------CCCCeeEeCCCCCcCc--cCcCCCC------CcEEEECCCC--CCcCCCCC--CCCcEEEeec
Confidence 2478899999999865 7786444 8999986544 69999999 9999999987
No 47
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B
Probab=99.90 E-value=1.1e-23 Score=179.25 Aligned_cols=121 Identities=21% Similarity=0.418 Sum_probs=101.4
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|+++||+++... ++|.+|+..|++ .||+|++|+|.+|++||..++..... ...||||+++.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------ 73 (125)
T 1umr_C 2 FCCPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLK-STFFWIGANNI------ 73 (125)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHTTCS-SSEEECSCCCT------
T ss_pred CCCCCCCEEcCCEeEEEECCC-cCHHHHHHHHhccCCcceECccCCHHHHHHHHHHHHhcCC-CCCEEEeeEeC------
Confidence 469999999999999999995 999999999999 89999999999999999999875432 34555555432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|..+| +|+.+....+ .|++.+|+ ..++||||++
T Consensus 74 ----------------~~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~fICe~~ 124 (125)
T 1umr_C 74 ----------------WNKCNWQWSDGTKPEY--KEWHEEF------ECLISRTFDN--QWLSAPCS--DTYSFVCKFE 124 (125)
T ss_dssp ----------------TTSSCEEETTSCCCSS--CCBCCCC------EEEEEESSCS--CEEEEETT--SCEEEEEEEE
T ss_pred ----------------CCCCeeEeCCcCccCc--ccCCCCC------CcEEEECCCC--cEeCCCCC--CCcceEEeec
Confidence 2468899999999875 7787444 8999976543 69999999 9999999987
No 48
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Probab=99.90 E-value=1.7e-23 Score=190.65 Aligned_cols=127 Identities=22% Similarity=0.469 Sum_probs=108.2
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+..||.||+.|+++||+++... ++|.+|+..|+++||+|++|+|.+|++||..++.. ....||||+++..
T Consensus 50 ~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~~~~------ 119 (184)
T 1sl6_A 50 CRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR---SNRFSWMGLSDLN------ 119 (184)
T ss_dssp CCBCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHH---TTCCEEEEEECCS------
T ss_pred CCCCCCCcEEECCEEEEEECCC-CCHHHHHHHHHhcCCEEEEeCCHHHHHHHHHHhcc---CCccEEEEEEccC------
Confidence 5789999999999999999995 99999999999999999999999999999987643 2345666666432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCcccc-ccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE-LDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~-~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ +..+|.+ +|++.+.++|+.+... .|++.+|+ ..++||||++
T Consensus 120 ----------------~~~~w~W~DGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe~~ 177 (184)
T 1sl6_A 120 ----------------QEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS----GWNDNRCD--VDNYWICKKP 177 (184)
T ss_dssp ----------------STTCCEETTSCBCCGGGGGGBCTTCCCCTTSCCEEEEETT----EEEEECTT--SCBEEEEEEE
T ss_pred ----------------CCCCeEecCCCccCCcccCCCCCCCCCCCCCCCceEEeCC----cEEccCCC--CCeeEEEeEC
Confidence 468899999999874 1268999 9998767899999753 39999999 9999999998
Q ss_pred h
Q psy14885 184 I 184 (483)
Q Consensus 184 ~ 184 (483)
+
T Consensus 178 ~ 178 (184)
T 1sl6_A 178 A 178 (184)
T ss_dssp C
T ss_pred C
Confidence 5
No 49
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens}
Probab=99.90 E-value=8.8e-24 Score=178.15 Aligned_cols=117 Identities=19% Similarity=0.348 Sum_probs=99.5
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
+||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++. ...||||+++..
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~~-------- 66 (118)
T 2yhf_A 1 MCPKDWEFYQARCFFLSTSE-SSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITD-----AEKYFIGLIYHR-------- 66 (118)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEEEET--------
T ss_pred CCCCCcEEeCCEEEEEeCCC-CCHHHHHHHHhhcCCEEEEeCCHHHHHHHHHhhC-----CCcEEEeccccC--------
Confidence 59999999999999999995 9999999999999999999999999999999873 346677765432
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++ .+|.+ +|+ +++|+.+... +.|++.+|+ ..++||||+++
T Consensus 67 --------------~~~~w~W~dg~~~----~~~~~~~~~---~~~C~~~~~~---~~w~~~~C~--~~~~fICe~~a 118 (118)
T 2yhf_A 67 --------------EEKRWRWINNSVF----NGNVTNQNQ---NFNCATIGLT---KTFDAASCD--ISYRRICEKNA 118 (118)
T ss_dssp --------------TTTEEEETTTEEC----CSCEESCCT---TCCEEEESSS---SSEEEECTT--SCBEEEEEEEC
T ss_pred --------------CCCcEEEeCCCcC----CCCccCCCC---CCCeeEEcCC---CcCccccCC--CCceeeecccC
Confidence 4678999999986 45877 775 4899999653 359999999 99999999873
No 50
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.90 E-value=7.8e-24 Score=179.72 Aligned_cols=120 Identities=23% Similarity=0.416 Sum_probs=101.7
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+||+||+.|+++||+++... ++|.+|+..|+. .||+|++|+|.+|++||..++..... ...+|||+++..
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~------ 72 (123)
T 1oz7_B 1 NCLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK-NDLVWIGLTDYW------ 72 (123)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCCSSHHHHHHHTSSTTTT-CSEEEEEEECCC------
T ss_pred CCCCCcEEcCCEEEEEECCc-cCHHHHHHHHhccCCCcEECCcCCHHHHHHHHHHHHhcCC-CCCEEEeeeeCC------
Confidence 59999999999999999995 999999999999 89999999999999999998865432 456677776432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|..+| +|+.+....+ .|++.+|+ ..++||||++
T Consensus 73 ----------------~~~~~~W~dg~~~~~--~~W~g~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~~ 122 (123)
T 1oz7_B 73 ----------------RDCNWEWSDGAQLDY--KAWDNER------HCFIYKNTDN--QWTRRDCT--WTFSFVCKCP 122 (123)
T ss_dssp ----------------CGGGEEETTCCCCCS--CCBCSST------TEEEEEGGGT--EEEEECTT--SCEEEEEEEE
T ss_pred ----------------CCCCEEEcCCCcccc--cCCCCCC------CeEEEECCCC--cEeCCCCC--CCeeEEEeEe
Confidence 467899999999875 7786444 9999976543 69999999 9999999987
No 51
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.90 E-value=1.6e-23 Score=177.49 Aligned_cols=119 Identities=18% Similarity=0.271 Sum_probs=101.1
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
.||+||+.|++.||+++... ++|.+|+..|+. .||+|++|+|++|++||..++..... ...||||+++..
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~------ 73 (122)
T 2e3x_C 2 DCPSGWLSYEQHCYKGFNDL-KNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLE-YPATWIGLGNMW------ 73 (122)
T ss_dssp CCCSSCEEETTEEEEECCCC-BCHHHHHHHHHHHSTTCCBCCCSSHHHHHHHHHHHHHHCS-SSEEEEEEESTT------
T ss_pred CCCcchhhhCCEeEEEECCC-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcCC-CCCEEEeeeecC------
Confidence 69999999999999999995 999999999999 89999999999999999999876532 456777776432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++.+ .+|..+| +|+.+....+ .|++.+|+ ..++||||+
T Consensus 74 ----------------~~~~~~W~dg~~~~~--~~W~~~P------~C~~~~~~~g--~w~~~~C~--~~~~~ICe~ 122 (122)
T 2e3x_C 74 ----------------KDCRMEWSDRGNVKY--KALAEES------YCLIMITHEK--VWKSMTCN--FIAPVVCKF 122 (122)
T ss_dssp ----------------SSSCEEETTSCCCCC--CCBCSCC------EEEEEETTTC--CEEEEETT--SCBCCEEC-
T ss_pred ----------------CCCceEeCCCCcccc--cccCCCC------CCEEEECCCC--cEeCCCCC--CCCceeecC
Confidence 468899999999875 7787444 8999976544 69999999 999999996
No 52
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.00A {Mus musculus} SCOP: d.169.1.1 PDB: 1qo3_C 3cad_A
Probab=99.89 E-value=1.1e-23 Score=180.78 Aligned_cols=121 Identities=17% Similarity=0.297 Sum_probs=102.4
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~ 106 (483)
..||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|++|++||..++. ...||||+++..
T Consensus 5 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~-----~~~~WIGl~~~~------- 71 (130)
T 3g8k_A 5 RGFEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP-----SDSYWIGLSYDN------- 71 (130)
T ss_dssp CCBCSEEEEETTEEEEEBSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC-----SSEEEEEEEEET-------
T ss_pred CCCChhhhhhCCEEEEEECCC-CCHHHHHHHHHhCCCeEcccCCHHHHHHHHHhcC-----CCCEEEeeeccC-------
Confidence 349999999999999999994 9999999999999999999999999999998873 356777776533
Q ss_pred CcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecchh
Q psy14885 107 DDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQ 185 (483)
Q Consensus 107 ~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~~ 185 (483)
.++.|.|+||+++.+ +|.+ +|+. ..++|+.+.. +.|++.+|+ ..++||||++..
T Consensus 72 ---------------~~~~w~W~dg~~~~~---~~~~~~~~~-~~~~Cv~~~~----~~w~~~~C~--~~~~fICe~~~~ 126 (130)
T 3g8k_A 72 ---------------KKKDWAWINNGPSKL---ALNTMKYNI-RDGGCMLLSK----TRLDNDNCD--KSFICICGKRLD 126 (130)
T ss_dssp ---------------TTTEEEEGGGCCCCC---CCCGGGCCG-GGCSEEEEES----SCEEEECTT--SCBEEEEEEETT
T ss_pred ---------------CCCceEeCCCCccCc---ccccCCCCC-CCCCceEEeC----CeEECCCCC--CCCeEeeeeecC
Confidence 468899999998863 4777 7764 4689999953 259999999 999999999854
No 53
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.89 E-value=1.3e-23 Score=179.01 Aligned_cols=122 Identities=22% Similarity=0.368 Sum_probs=104.1
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|+++||+++... ++|.+|+..|+. .||+||+|+|++|++||..++..... ...||||+++..
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~~----- 74 (126)
T 3ubu_B 2 FCCPLRWSAYEGHCYLVVKEK-KTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILD-LSLIWMGLSNMW----- 74 (126)
T ss_dssp CSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHHC-SCEEEEEEECTT-----
T ss_pred CCCCCCCeEcCCEeEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHhhccC-CCcEEEeEEcCC-----
Confidence 469999999999999999995 999999999999 99999999999999999999876421 236677776532
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ .++|+.+....+ ..|++.+|+ ..++||||++
T Consensus 75 -----------------~~~~~~W~dg~~~~~--~~W~~------~~~Cv~~~~~~~-~~W~~~~C~--~~~~fICe~~ 125 (126)
T 3ubu_B 75 -----------------NDCKREWSDGTKLDF--KSWAK------TSDCLIGKTDGD-NQWLNMDCS--KKHYFVCKFK 125 (126)
T ss_dssp -----------------TSSEEEETTCCCCCC--CCBCC------CCCEEEEESSTT-CCEEEECTT--SCEEEEEEEE
T ss_pred -----------------CCCceEecCCCeeee--eccCC------CCCeEEEecCCC-CcCcCCCCC--CCceeEEeee
Confidence 468899999999875 78964 589999987654 469999999 9999999997
No 54
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B
Probab=99.89 E-value=1.2e-23 Score=179.08 Aligned_cols=121 Identities=19% Similarity=0.342 Sum_probs=101.0
Q ss_pred CCCcccccccCCeEEEEecCCCCCHHHHHHHhhh--cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 27 ~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~--~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
..||+||+.|++.||+++... ++|.+|+..|++ .||+|++|+|.+|++||..++..... ...||||+++.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~-~~~~WIGl~~~------ 73 (125)
T 1c3a_B 2 FCCPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILK-YDFVWIGLSNV------ 73 (125)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHC-SCEEECSCCCT------
T ss_pred CCCCCcceecCCEEEEEECCC-CCHHHHHHHhhccCCCcEECccCCHHHHHHHHHHHHhcCC-CCCEEEeeEcC------
Confidence 469999999999999999995 999999999999 89999999999999999998865421 34555555432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
..++.|.|+||+++.+ .+|..+| +|+.+....+ .|++.+|+ ..++||||++
T Consensus 74 ----------------~~~~~~~W~dg~~~~~--~~w~~~P------~C~~~~~~~g--~w~~~~C~--~~~~fiCe~~ 124 (125)
T 1c3a_B 74 ----------------WNECTKEWSDGTKLDY--KAWSGGS------DCIVSKTTDN--QWLSMDCS--SKYYVVCKFQ 124 (125)
T ss_dssp ----------------TTSSCEEETTCCCCCS--CCBCCCC------EEEEEESSSS--CEEEEETT--SCEEEEEEEE
T ss_pred ----------------CCCCceEeCCCCcccc--cccCCCC------CcEEEECCCC--CEeCCCCC--CCCeeEEeee
Confidence 2468899999999875 7786444 8999976544 69999999 9999999987
No 55
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Probab=99.89 E-value=3.4e-24 Score=182.13 Aligned_cols=118 Identities=25% Similarity=0.426 Sum_probs=101.8
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+..||+||+.|+++||+++... ++|.+|+..|+++||+|++|+|++|++||..+. ..||||+++..
T Consensus 3 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~-------~~~WIGl~~~~------ 68 (123)
T 1hq8_A 3 CGPCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVK-------SYHWMGLVQIP------ 68 (123)
T ss_dssp CCCCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCSCTTTTGGGGGCC-------SCEEEEEEECT------
T ss_pred CCCCCcccEEcCCEEEEEeCCc-cCHHHHHHHHHhcCCEecccCCHHHHHHHHhcc-------CCEEEEeeecC------
Confidence 6789999999999999999995 999999999999999999999999999997531 35666665432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|+ +++|+.+... +.|.+.+|+ ..++||||++
T Consensus 69 ----------------~~~~w~W~dg~~~~~--~~w~~~~p~---~~~C~~~~~~---~~w~~~~C~--~~~~fICe~~ 121 (123)
T 1hq8_A 69 ----------------ANGSWQWEDGSSLSY--NQLTLVEIP---KGSCAVYGSS---FKAYTEDCA--NLNTYICMKR 121 (123)
T ss_dssp ----------------TTCCEEETTSCBCCT--TTCEEECCT---TCCEEEECST---TEEEEECTT--SCEEEEEEEC
T ss_pred ----------------CCCCeEeCCCCCccc--cccccCCCC---CCCcEEEecc---CCEeccCCC--CCceeEeeee
Confidence 468899999999876 88999 997 4799999754 269999999 9999999997
No 56
>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B
Probab=99.89 E-value=4.6e-24 Score=185.16 Aligned_cols=123 Identities=21% Similarity=0.443 Sum_probs=104.2
Q ss_pred cCcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCC
Q psy14885 22 IDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPN 101 (483)
Q Consensus 22 ~~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~ 101 (483)
....+..||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..+. ..||||+++..
T Consensus 14 ~~~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~-------~~~WIGl~~~~-- 83 (138)
T 1mpu_A 14 TESYCGPCPKNWICYKNNCYQFFDES-KNWYESQASCMSQNASLLKVYSKEDQDLLKLVK-------SYHWMGLVHIP-- 83 (138)
T ss_dssp CCCCCCCCCTTCEECSSCEEEEEEEE-ECHHHHHHHHHHTSCEECCCCCTTTCGGGGGCC-------SEEEEEEEECT--
T ss_pred CCCccCCCChhheEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhcc-------CCEeEeeeccC--
Confidence 33446789999999999999999995 999999999999999999999999999987431 46677776432
Q ss_pred cccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeee
Q psy14885 102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFIC 180 (483)
Q Consensus 102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvC 180 (483)
.++.|.|+||+++.+ .+|.+ +|+ +++|+.+... +.|.+.+|+ ..++|||
T Consensus 84 --------------------~~~~w~W~dG~~~~~--~~w~~~~p~---~~~C~~~~~~---~~w~~~~C~--~~~~fIC 133 (138)
T 1mpu_A 84 --------------------TNGSWQWEDGSILSP--NLLTIIEMQ---KGDCALYASS---FKGYIENCS--TPNTYIC 133 (138)
T ss_dssp --------------------TTCCEEETTSCBCCT--TSCEEECSS---CCSEEEEETT---TEEEEECTT--SCEEEEE
T ss_pred --------------------CCCceEeCCCCcCCc--cccccCCCC---CCCCeEEECC---CcEEccCCC--CCCeEcc
Confidence 468899999999876 88999 996 4799999754 259999999 9999999
Q ss_pred ecch
Q psy14885 181 EASI 184 (483)
Q Consensus 181 e~~~ 184 (483)
|++.
T Consensus 134 e~~~ 137 (138)
T 1mpu_A 134 MQRT 137 (138)
T ss_dssp EECC
T ss_pred cCcC
Confidence 9973
No 57
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A
Probab=99.89 E-value=1.2e-23 Score=190.29 Aligned_cols=127 Identities=20% Similarity=0.467 Sum_probs=104.4
Q ss_pred CcccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCc
Q psy14885 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL 102 (483)
Q Consensus 23 ~~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~ 102 (483)
...+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|++++|++||..++. ...||||+++..
T Consensus 11 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~-----~~~~WIGl~~~~--- 81 (175)
T 2h2t_B 11 GFVCNTCPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKRAS-----HTGSWIGLRNLD--- 81 (175)
T ss_dssp ---CCBCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC-----TTCEEEEEEEET---
T ss_pred CccCCCCCcccEEeCCEEEEEeCCc-cCHHHHHHHHhhcCCEEeecCCHHHHHHHHHHhc-----CCcEEecceecC---
Confidence 3346789999999999999999994 9999999999999999999999999999998773 245666666432
Q ss_pred ccccCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCce-eee
Q psy14885 103 WVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPL-LFI 179 (483)
Q Consensus 103 Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~-~fv 179 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++|+.+... +.|+|.+|+ ..+ +||
T Consensus 82 -------------------~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~~fI 135 (175)
T 2h2t_B 82 -------------------LKGEFIWVDGSHVDY--SNWAPGEPTSRSQSEDCVMMRGS---GRWNDAFCD--RKLGAWV 135 (175)
T ss_dssp -------------------TTTEEEETTSCCCSS--CCBCTTCCCC-----CEEEECTT---SCEEEECTT--CCEEEEE
T ss_pred -------------------CCCCeEeCCCCcccC--cCcCCCCCCCCCCCCCceEEcCC---CcEEECCCC--CcCcceE
Confidence 468899999999876 88999 99874 36899999642 369999999 999 999
Q ss_pred eecch
Q psy14885 180 CEASI 184 (483)
Q Consensus 180 Ce~~~ 184 (483)
||++.
T Consensus 136 Ce~~~ 140 (175)
T 2h2t_B 136 CDRLA 140 (175)
T ss_dssp EEEEC
T ss_pred EeECC
Confidence 99985
No 58
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.89 E-value=1.2e-23 Score=183.23 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=104.3
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
.|++||+.|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++. ..||||+++..
T Consensus 19 ~~~~~w~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~-------- 83 (141)
T 1hup_A 19 LTFSLGKQVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLIK------EEAFLGITDEK-------- 83 (141)
T ss_dssp HHHHTSEEETTEEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS------SCEEEEEECSS--------
T ss_pred hhcCCeEEECCEEEEEeCCC-cCHHHHHHHHHhCCCEECccCCHHHHHHHHHHhc------CCEEEeeeecC--------
Confidence 58899999999999999985 9999999999999999999999999999998874 55677776433
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++|+.+... +.|++.+|+ ..++||||++
T Consensus 84 --------------~~~~w~W~dG~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~---g~W~~~~C~--~~~~fICe~~ 140 (141)
T 1hup_A 84 --------------TEGQFVDLTGNRLTY--TNWNEGEPNNAGSDEDCVLLLKN---GQWNDVPCS--TSHLAVCEFP 140 (141)
T ss_dssp --------------STTCCEETTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEEE
T ss_pred --------------cCCcEEECCcCCCcC--CCCCCCCCCCCCCCCCeEEECCC---CcEeccCCC--CCccEEEEEE
Confidence 468899999999975 89999 99873 46899999732 369999999 9999999987
No 59
>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H
Probab=99.89 E-value=2.4e-23 Score=176.08 Aligned_cols=117 Identities=21% Similarity=0.467 Sum_probs=96.8
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+..||+||+.|+++||+++... ++|.+|+..|++.||+||+|+|++|++||..++ ..||||+++..
T Consensus 4 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-------~~~WIGl~~~~------ 69 (120)
T 3bdw_B 4 CGHCPEEWITYSNSCYYIGKER-RTWEESLLACTSKNSSLLSIDNEEEMKFLSIIS-------PSSWIGVFRNS------ 69 (120)
T ss_dssp CTTSCTTCEESSSSEEEEEEEE-ECHHHHHHHHHHTTSEECCCCCHHHHHHHHHHC-------SEEEEEEECSS------
T ss_pred CCCCCCCceEECCEEEEEECCc-cCHHHHHHHHHhCCCEEceeCCHHHHHHHHHcC-------CCEeEEEEecC------
Confidence 5789999999999999999985 999999999999999999999999999999864 36777776533
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+| +|++ ..++|+.+... .|.+.+|+ ..++||||++
T Consensus 70 ----------------~~~~w~W~dg~~~~~--~~~--~p~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICe~~ 120 (120)
T 3bdw_B 70 ----------------SHHPWVTMNGLAFKH--EIK--DSDN-AELNCAVLQVN----RLKSAQCG--SSIIYHCKHK 120 (120)
T ss_dssp ----------------TTSCCEETTSSBCCS--CCC-------CCCCEEEEESS----SEEEECTT--SCEEEEEECC
T ss_pred ----------------CCCceEeCCCCccCc--cCc--CCCC-CCCCccEEeCC----ceECCCCC--CCcceeeeeC
Confidence 467899999999865 444 6665 35899999753 39999999 9999999974
No 60
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Probab=99.89 E-value=1.9e-23 Score=187.97 Aligned_cols=129 Identities=22% Similarity=0.449 Sum_probs=106.2
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
.+..||.||+.|+++||+++... ++|.+|+..|+.+||+|++|+|.+|++||..++... ...||||+++..
T Consensus 18 ~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~~---~~~~WIGl~~~~----- 88 (170)
T 2xr6_A 18 LSHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS---NRFTWMGLSDLN----- 88 (170)
T ss_dssp ---CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHH---TCCEEEEEEEEE-----
T ss_pred ccCCCCcCcEEeCCEEEEEECCc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhccC---CCCEEeccccCC-----
Confidence 36789999999999999999995 999999999999999999999999999999876432 345566665422
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccc-cccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNEL-DAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~-~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++.+. ..+|.+ +|++.+.++|+.+... .|+|.+|+ ..++||||+
T Consensus 89 -----------------~~~~w~W~dG~~~~~~~~~~W~~geP~~~~~~~Cv~~~~~----gW~d~~C~--~~~~fICe~ 145 (170)
T 2xr6_A 89 -----------------QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN----GWNDDKCN--LAKFWICKK 145 (170)
T ss_dssp -----------------ETTEEEETTSCBCCGGGGGGBCTTCCCCTTCCCEEEEETT----EEEEECTT--SCBEEEEEE
T ss_pred -----------------CCCeEEeCCCCCcccccccCCCCCCCCCCCCCCCeEEeCC----cEEccccC--CCccEEEEE
Confidence 4688999999988741 278999 9988767899999753 39999999 999999999
Q ss_pred chh
Q psy14885 183 SIQ 185 (483)
Q Consensus 183 ~~~ 185 (483)
+..
T Consensus 146 ~~~ 148 (170)
T 2xr6_A 146 SAA 148 (170)
T ss_dssp ETT
T ss_pred CCC
Confidence 854
No 61
>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} SCOP: d.169.1.0 PDB: 3t3a_A
Probab=99.89 E-value=3.6e-23 Score=179.60 Aligned_cols=124 Identities=20% Similarity=0.417 Sum_probs=102.2
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
...||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++... ...||||+++..
T Consensus 3 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~~~~------ 72 (139)
T 3m9z_A 3 KLECPQDWLSHRDKCFHVSQVS-NTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK---YNSFWIGLRYTL------ 72 (139)
T ss_dssp -CCCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCCHHHHHHHHHHHTCS---SSCEEEEEEEEC------
T ss_pred CCCCCccceecCCEEEEEECCc-CCHHHHHHHHHhcCCeEeeeCCHHHHHHHHHHhccc---CccEEEEEeccC------
Confidence 4679999999999999999995 999999999999999999999999999999988632 345666666432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ .+|.. .|.+ +++|+.+.. +.|.+.+|+ ..++||||++.
T Consensus 73 ----------------~~~~w~W~dg~~~~~--~~~~~~~~~~--~~~Cv~~~~----~~w~~~~C~--~~~~fICe~~~ 126 (139)
T 3m9z_A 73 ----------------PDMNWKWINGSTLNS--DVLKITGDTE--NDSCAAISG----DKVTFESCN--SDNRWICQKEL 126 (139)
T ss_dssp ----------------CCCCCBCTTSCBCCH--HHHTTSSCTT--CEEEEEEET----TEEEEEETT--SCBEEEEEEEC
T ss_pred ----------------CCCCeEeCCCCcCCc--CccccCCCCC--CCCeeEEeC----CcEEeCCCC--CCCceEeeecC
Confidence 467899999999876 45654 4332 479999964 359999999 99999999986
Q ss_pred h
Q psy14885 185 Q 185 (483)
Q Consensus 185 ~ 185 (483)
.
T Consensus 127 ~ 127 (139)
T 3m9z_A 127 Y 127 (139)
T ss_dssp C
T ss_pred c
Confidence 4
No 62
>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} SCOP: d.169.1.1 PDB: 1e87_A 1e8i_A 3cck_A
Probab=99.88 E-value=9.8e-23 Score=174.86 Aligned_cols=118 Identities=15% Similarity=0.356 Sum_probs=99.1
Q ss_pred cccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcc
Q psy14885 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (483)
Q Consensus 24 ~~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~W 103 (483)
.....||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|++|++||..++. ...||||+++.
T Consensus 11 ~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~~----- 79 (130)
T 3hup_A 11 SHVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG-----REEHWVGLKKE----- 79 (130)
T ss_dssp CCCBCCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHT-----TSCEEEEEEEC-----
T ss_pred CCCCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeecCCHHHHHHHHHhhC-----CCCEEEEEEeC-----
Confidence 346789999999999999999994 9999999999999999999999999999999883 34567776642
Q ss_pred cccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 104 VNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 104 ig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++ .+|.+ . .+.++|+.+... .|++.+|+ ..++||||++
T Consensus 80 ------------------~~~~w~W~dg~~~----~~w~~--~-~~~~~Cv~~~~~----~w~~~~C~--~~~~fICe~~ 128 (130)
T 3hup_A 80 ------------------PGHPWKWSNGKEF----NNWFN--V-TGSDKCVFLKNT----EVSSMECE--KNLYWICNKP 128 (130)
T ss_dssp ------------------TTSCEEETTSCBC----CCCSC--C-CSSCSEEEEETT----EEEEECTT--SCBEEEEEEE
T ss_pred ------------------CCCeEEeCCCCcc----cCccC--C-CCCCCceEEeCC----CcccCCCC--CCccEEeccC
Confidence 2578999999974 57874 1 235899999652 49999999 9999999997
No 63
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=99.88 E-value=3.2e-23 Score=182.32 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=103.9
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
.|++||+.++++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++. ..||||+++..
T Consensus 27 ~~~~~w~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~~~~-------- 91 (149)
T 1rtm_1 27 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV-------- 91 (149)
T ss_dssp HHHHTTCCTTSCEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHS------SCEEEEEECSS--------
T ss_pred hcCCCeEEeCCEEEEEeCCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc------CCEEEEeeccC--------
Confidence 47899999999999999985 9999999999999999999999999999999883 45677766432
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCC-cccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPAD-NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~-~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++ .+.++|+.+... +.|++.+|+ ..++||||++
T Consensus 92 --------------~~~~w~W~dg~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fICe~~ 148 (149)
T 1rtm_1 92 --------------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP 148 (149)
T ss_dssp --------------STTCCEETTSSBCCS--CCBCTTCCCCCTTCCCEEEECGG---GCEEEECTT--SEEEEEEEEC
T ss_pred --------------cCCeEEECCCCCccc--cCcCCCCCCCCCCCCCeEEECCC---CCEeCCCCC--CCeeEEEEee
Confidence 567899999999965 88999 9987 346899999732 369999999 9999999987
No 64
>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A
Probab=99.88 E-value=1e-23 Score=184.56 Aligned_cols=124 Identities=21% Similarity=0.173 Sum_probs=97.5
Q ss_pred cceEe-eCCCCCCCceEEEEEeCCCEE----E-eC--CC--CCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHh
Q psy14885 220 TDVVF-DLSKRNSNTGFAFIINNENFQ----Y-RL--PH--EASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNG 289 (483)
Q Consensus 220 ~~~~~-DgS~~~~~~G~g~~~~~~~~~----~-~l--~~--~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~ 289 (483)
..++| |||+.+|++|+|+++.+.+.. . .+ +. .+||++||+.|++.||+.+.+.+. +|.|+|||+.+.+.
T Consensus 6 ~i~iytDGs~~~g~~G~G~vi~~~g~~~~~~~~~~~~~~~~~~tNn~aEl~A~~~AL~~a~~~~~-~v~I~tDS~~i~~w 84 (147)
T 2kq2_A 6 EYDVYTDGSYVNGQYAWAYAFVKDGKVHYEDADVGKNPAAATMRNVAGEIAAALYAVKKASQLGV-KIRILHDYAGIAFW 84 (147)
T ss_dssp CCEEECCCCCBTTBCEEEEEEEETTEEEEEEEEECCCGGGGGTCTTHHHHHHHHHHHHHHHHHTC-CCCBSSCCSTHHHH
T ss_pred eEEEEECCCCCCCCcEEEEEEEECCEEEEEEeccccccccccccHHHHHHHHHHHHHHHHHHCCC-eEEEEECcHHHHHH
Confidence 45567 999999999999999765432 2 22 21 369999999999999999877666 99999999999998
Q ss_pred hcccCCcc-hHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCC
Q psy14885 290 IDNIQQRN-NIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLL 347 (483)
Q Consensus 290 l~~~~~~~-~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~ 347 (483)
+.+.++.+ .....+.+.+..+.. .|+|.|||||+|++|||.||+|||+|+....+
T Consensus 85 ~~~~w~~~~~~~~~~~~l~~~l~~---~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~ 140 (147)
T 2kq2_A 85 ATGEWKAKNEFTQAYAKLMNQYRG---IYSFEKVKAHSGNEFNDYVDMKAKSALGIRDL 140 (147)
T ss_dssp TTSSSSCCHHHHHHHHCGGGGGST---TCCBCCCCCCCCCHHHHHHHHHHHHHHTCCCT
T ss_pred HhCCCccCCcchHHHHHHHHHhcC---CeeEEEecCcCCCcchHHHHHHHHHHHhcccc
Confidence 88877643 333344444444432 89999999999999999999999999987654
No 65
>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0
Probab=99.88 E-value=6.6e-23 Score=171.17 Aligned_cols=112 Identities=24% Similarity=0.412 Sum_probs=95.2
Q ss_pred CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD 108 (483)
Q Consensus 29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~ 108 (483)
||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++. ...||||+++
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WiGl~~----------- 63 (112)
T 3ff7_C 1 CPDRWMKYGNHCYYFSVEE-KDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLS-----EAFSWIGLRN----------- 63 (112)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHTTCC-----SSCEEEEEEE-----------
T ss_pred CCccceEeCCEEEEEeCCc-cCHHHHHHHHhhcCCeEeeECCHHHHHHHHHhcc-----CCCEEEeeec-----------
Confidence 9999999999999999995 9999999999999999999999999999998773 2345666653
Q ss_pred ccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
++.|.|+||+++.+ .+|.+ ++ +.++|+.+... .|.+.+|+ ..++|||||
T Consensus 64 --------------~~~~~W~dg~~~~~--~~w~~--~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICek 112 (112)
T 3ff7_C 64 --------------NSGWRWEDGSPLNF--SRISS--NS-FVQTCGAINKN----GLQASSCE--VPLHWVCKK 112 (112)
T ss_dssp --------------SSSEEETTSCBCCS--SCEEC--SS-TTCCEEEEETT----EEEEECTT--SCBEEEEEC
T ss_pred --------------CCceEeCCCCcccc--ceecC--CC-CCCCCeEEeCC----CcccCCCC--CCCceeecC
Confidence 35699999999876 78875 22 25899999752 39999999 999999997
No 66
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C
Probab=99.88 E-value=5.2e-23 Score=172.65 Aligned_cols=114 Identities=19% Similarity=0.280 Sum_probs=95.7
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
+||+||+.|+++||+++... ++|.+|+..|+++||+||+|+|.+|++||..++. ...||||+++
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~~WIGl~~---------- 64 (115)
T 3ff9_A 1 MCPILWTRNGSHCYYFSMEK-KDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLG-----QDFYWIGLRN---------- 64 (115)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCTTSCCHHHHHTTCC-----SSCEEEEEEE----------
T ss_pred CCCccceecCCEEEEEEcCC-cCHHHHHHHHHhcCCeeeeeCCHHHHHHHHHhhC-----CCcEEEeeee----------
Confidence 59999999999999999995 9999999999999999999999999999998773 2356666653
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
++.|.|+||+++.+ .| +|++ +.++|+.+... .|.+.+|+ ..++||||+++
T Consensus 65 ---------------~~~w~W~dg~~~~~---~~--~p~~-~~~~C~~~~~~----~w~~~~C~--~~~~fICe~~~ 114 (115)
T 3ff9_A 65 ---------------IDGWRWEGGPALSL---RI--LTNS-LIQRCGAIHRN----GLQASSCE--VALQWICKKVL 114 (115)
T ss_dssp ---------------SSSEEETTSCBCCS---CC--BCSS-TTCCEEEEETT----EEEEECTT--SCBEEEEEEEC
T ss_pred ---------------CCceEeCCCCcccc---cc--cCCC-CCCCCeEEcCC----CcccccCC--CCCceEEEEec
Confidence 35699999998864 24 4544 46899999752 39999999 99999999973
No 67
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Probab=99.88 E-value=1.4e-22 Score=186.94 Aligned_cols=118 Identities=15% Similarity=0.348 Sum_probs=96.2
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 25 ~~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
....||+||+.|+++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++. ...||||+++.
T Consensus 81 ~~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~-----~~~~WIGl~~~------ 148 (199)
T 1fm5_A 81 HVSSCSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG-----REEHWVGLKKE------ 148 (199)
T ss_dssp ----CCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SSCEEEEEECC------
T ss_pred CCCCCCCCcEEECCEEEEEeCCc-cCHHHHHHHHhhcCCEEEecCCHHHHHHHHHhhC-----CCCEEeeeEEC------
Confidence 35779999999999999999994 9999999999999999999999999999999884 24566666532
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
. ++.|.|+||+++ ++|.+ . .+.++|+.+.. +.|+|.+|+ ..++||||++.
T Consensus 149 ----------------~-~~~w~W~DGs~~----~~W~~--~-~~~~~Cv~l~~----~~W~d~~C~--~~~~fICe~~~ 198 (199)
T 1fm5_A 149 ----------------P-GHPWKWSNGKEF----NNWFN--V-TGSDKCVFLKN----TEVSSMECE--KNLYWICNKPY 198 (199)
T ss_dssp ----------------T-TSCCEETTSCBC----CCSSC--C-CSSSSEEEECS----SCEEEECTT--SCBEEEEEEEC
T ss_pred ----------------C-CCCeEECCCCcc----ccccC--C-CCCCCceEEEC----CCEEEecCC--CCEEEEccccC
Confidence 1 578999999974 57873 2 23589999965 359999999 99999999973
No 68
>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A
Probab=99.88 E-value=1.9e-22 Score=176.79 Aligned_cols=121 Identities=14% Similarity=0.218 Sum_probs=91.5
Q ss_pred cceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc---
Q psy14885 220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI--- 293 (483)
Q Consensus 220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~--- 293 (483)
..++| |||+.+ |+.|+|+++.+......-...+||++||+.|++.||+.+ ..++.|+|||++|++.|++.
T Consensus 12 ~~~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~Tnn~aEl~A~i~AL~~~----~~~v~i~tDS~~v~~~i~~w~~~ 87 (150)
T 3qio_A 12 AETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDS----GLEVNIVTDSQYALGIITQWIHN 87 (150)
T ss_dssp CEEEEEEEEECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHHS----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEccCCCCCCCCeEEEEEEEcCCEEEEeCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeCcHHHHHHHHHHHHH
Confidence 35566 999865 778999998765443222367899999999999999986 48999999999999999862
Q ss_pred -----CC---cchH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885 294 -----QQ---RNNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344 (483)
Q Consensus 294 -----~~---~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~ 344 (483)
+. +.++ ...+.+.+..+..++..|+|.|||||+|++|||.||+||++|+..
T Consensus 88 W~~~gw~~~~g~~v~n~~l~~~l~~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~ 147 (150)
T 3qio_A 88 WKKRGWKTADKKPVKNVDLVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK 147 (150)
T ss_dssp HCC------------CHHHHHHHHHHHTTCSEEEEEECCTTSCCHHHHHHHHHHHTTTSC
T ss_pred HhhcCcCcCcCcccccHHHHHHHHHHHhhcCceEEEEccCcCCChhHHHHHHHHHHHHHH
Confidence 11 1111 123344444434568899999999999999999999999999875
No 69
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*
Probab=99.88 E-value=2.6e-22 Score=177.33 Aligned_cols=124 Identities=23% Similarity=0.309 Sum_probs=95.8
Q ss_pred ceEe-eCCCCC--C---CceEEEEEeCCC---EEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhc
Q psy14885 221 DVVF-DLSKRN--S---NTGFAFIINNEN---FQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID 291 (483)
Q Consensus 221 ~~~~-DgS~~~--~---~~G~g~~~~~~~---~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~ 291 (483)
.++| |||+.+ + .+|+|+++.+.. ....+.+.+||++||+.|++.||+.+.+.+..++.|+|||++|++.|.
T Consensus 8 ~~iytDGs~~~n~~~~~~aG~Gvv~~~~~~~~~~~~l~~~~tn~~aEl~A~~~aL~~~~~~~~~~v~i~tDS~~vi~~i~ 87 (154)
T 2qkb_A 8 VVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSMFTINGIT 87 (154)
T ss_dssp EEEEEEEEEETTTSSSCEEEEEEECSTTCTTCEEEECCSSCCHHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHH
T ss_pred EEEEEccCcCCCCCCCCcEEEEEEEECCCceeEEeecCCCCchHHHHHHHHHHHHHHHHhCCCceEEEEECcHHHHhhhh
Confidence 4466 999865 2 379999987532 456676678999999999999999998877899999999999999998
Q ss_pred cc--------CCc---ch-HHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885 292 NI--------QQR---NN-IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK 345 (483)
Q Consensus 292 ~~--------~~~---~~-~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~ 345 (483)
+. ++. .+ ....+.+.+..+.. +..|+|.|||||+|++|||.||+|||+|+..+
T Consensus 88 ~~~~~w~~~~w~~~~~~~~~n~~l~~~i~~l~~-~~~v~~~~V~~H~g~~~N~~AD~LA~~a~~~~ 152 (154)
T 2qkb_A 88 NWVQGWKKNGWKTSAGKEVINKEDFVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREGAKQS 152 (154)
T ss_dssp THHHHHHTTTSBCTTSSBCTTHHHHHHHHHHHT-TCEEEEEECCTTSSCHHHHHHHHHHHHHHTCC
T ss_pred hhHHHHHhccccccCCCccccHHHHHHHHHHHc-CCceEEEEccCCCCCHhHHHHHHHHHHHHHhc
Confidence 61 221 11 11334444444444 46799999999999999999999999998764
No 70
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1
Probab=99.87 E-value=1.1e-22 Score=182.65 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=103.6
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
.||++|..++++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++. ..||||+++..
T Consensus 46 ~~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WIGl~d~~-------- 110 (168)
T 1buu_A 46 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV-------- 110 (168)
T ss_dssp HHHHTTCCTTSCEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHC------SCEECSEECSS--------
T ss_pred ccCCCeEEECCEEEEEeCCc-cCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc------CCEEeeeecCC--------
Confidence 58999999999999999985 9999999999999999999999999999998873 45666665432
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++||.+... +.|+|.+|+ ..++||||++
T Consensus 111 --------------~~g~w~W~dG~~~~y--~~W~~geP~~~~~~e~Cv~~~~~---g~W~d~~C~--~~~~~ICe~~ 167 (168)
T 1buu_A 111 --------------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP 167 (168)
T ss_dssp --------------STTCCEETTSSBCSC--CCBSSSSCCCTTSCCCEEEECTT---SCEEEECTT--SCEEEEEEEC
T ss_pred --------------cCCCEEeCCCCCcCC--CCCCCCCCCCCCCCCCeEEECCC---CCEEccCCC--CCEEEEEEec
Confidence 578899999999965 89999 99873 46899999732 369999999 9999999986
No 71
>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}
Probab=99.87 E-value=1.6e-22 Score=177.15 Aligned_cols=122 Identities=16% Similarity=0.225 Sum_probs=90.0
Q ss_pred cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc
Q psy14885 220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI 293 (483)
Q Consensus 220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~ 293 (483)
..++| |||+.+ |.+|+|+++...+....+ .+.+||++||+.|++.||+.+.+ ..++.|+|||++|++.|.+.
T Consensus 4 ~i~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~A~~~AL~~~~~--~~~v~I~tDS~~vi~~i~~~ 81 (146)
T 3h08_A 4 TITIYTDGAASGNPGKGGWGALLMYGSSRKEISGYDPATTNNRMELMAAIKGLEALKE--PARVQLYSDSAYLVNAMNEG 81 (146)
T ss_dssp EEEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSS--CCEEEEEESCHHHHHHHHSS
T ss_pred eEEEEEecCCCCCCCceEEEEEEEECCeeEEeecCCCCCcHHHHHHHHHHHHHHhcCc--cCcEEEEeChHHHHHHHHHH
Confidence 34566 999866 778999999775543222 24689999999999999999974 68999999999999999872
Q ss_pred C---------C---cch-HHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885 294 Q---------Q---RNN-IIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344 (483)
Q Consensus 294 ~---------~---~~~-~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~ 344 (483)
+ . +.+ ....+.+.+..+.. ...|+|.|||||+|+++||.||+|||+|+..
T Consensus 82 w~~~W~~~~w~~~~~~~v~n~~l~~~~~~~~~-~~~v~~~~V~gH~g~~~N~~AD~LA~~a~~~ 144 (146)
T 3h08_A 82 WLKRWVKNGWKTAAKKPVENIDLWQEILKLTT-LHRVTFHKVKGHSDNPYNSRADELARLAIKE 144 (146)
T ss_dssp HHHHHHHTTCC----CCCTTHHHHHHHHHHHH-HSEEEEEECCC-CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCccCCCCCcCCHHHHHHHHHHHh-hCceEEEEcCCcCCcHhHHHHHHHHHHHHHh
Confidence 1 1 101 11223333333333 2479999999999999999999999999864
No 72
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D
Probab=99.87 E-value=1.1e-22 Score=188.20 Aligned_cols=122 Identities=19% Similarity=0.319 Sum_probs=104.8
Q ss_pred cCCCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccc
Q psy14885 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (483)
Q Consensus 26 ~~~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig 105 (483)
+..||+||+.|+++||+++... ++|.+|+..|++.||+|++|+|.+|++||..++. ...||||+++..
T Consensus 77 ~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~E~~fl~~~~~-----~~~~WIGl~~~~------ 144 (203)
T 3c8j_A 77 TGRGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVI-----PGNYWIGLSYDK------ 144 (203)
T ss_dssp CCCCCEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCCBCCCCSHHHHHHHHHHSC-----SSCEEEEEEEET------
T ss_pred CCCCCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEeeeeCCHHHHHHHHHhcC-----CCCEEEeeeecC------
Confidence 5689999999999999999995 9999999999999999999999999999999874 345666666432
Q ss_pred cCcccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 106 EDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 106 ~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++. .+|.+ +|+. +.++|+.+... .|++.+|+ ..++||||+++
T Consensus 145 ----------------~~~~w~W~DGs~~~---~~w~~~~pn~-~~~~Cv~l~~~----~W~d~~C~--~~~~fICe~~~ 198 (203)
T 3c8j_A 145 ----------------KKKEWAWIDNGPSK---LDMKIKKMNF-KSRGCVFLSKA----RIEDIDCN--IPYYCICGKKL 198 (203)
T ss_dssp ----------------TTTEEEETTSCCCT---THHHHHTTCC-CSSSEEEECSS----CEEEECTT--SCEEEEEEEEC
T ss_pred ----------------CCCceEECCCCCCC---CCCCCCCCCC-CCCCcEEEECC----cEECcCCC--CCEEEEEeECC
Confidence 46889999999986 36988 8874 46899999642 59999999 99999999986
Q ss_pred h
Q psy14885 185 Q 185 (483)
Q Consensus 185 ~ 185 (483)
.
T Consensus 199 ~ 199 (203)
T 3c8j_A 199 D 199 (203)
T ss_dssp S
T ss_pred c
Confidence 4
No 73
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=99.87 E-value=4.1e-22 Score=167.13 Aligned_cols=112 Identities=16% Similarity=0.188 Sum_probs=93.9
Q ss_pred cCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccc
Q psy14885 36 YRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWY 115 (483)
Q Consensus 36 ~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~ 115 (483)
++++||+++... ++|.+|+..|+.+||+|++|+|++|++||..++. ..||||+++..
T Consensus 1 ig~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~------~~~WiGl~~~~---------------- 57 (115)
T 2msb_A 1 SGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK------TSAFLGITDEV---------------- 57 (115)
T ss_dssp ---CEEEEEEEE-ECHHHHHHHHHHTTCEECCCSSHHHHHHHHHHHS------SCEEEEEECSS----------------
T ss_pred CCCEEEEEeCCC-cCHHHHHHHHHhCCCEEeccCCHHHHHHHHHhhc------CCEEEeeEcCC----------------
Confidence 367899999995 9999999999999999999999999999999883 45677766432
Q ss_pred cCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 116 FGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 116 ~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++|+.+... +.|++.+|+ ..++||||++
T Consensus 58 ------~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~~C~~~~~~---g~W~~~~C~--~~~~fiCe~~ 114 (115)
T 2msb_A 58 ------TEGQFMYVTGGRLTY--SNWKKDEPNDHGSGEDCVTIVDN---GLWNDISCQ--ASHTAVCEFP 114 (115)
T ss_dssp ------STTCCEETTSSBCCS--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCEEEEEEEC
T ss_pred ------CCCcEEECCCCEeee--cCcCCCCCCCCCCCCCeEEECCC---CCEECcCCC--CCeEEEEeEc
Confidence 567899999999975 89999 99873 46899999732 369999999 9999999987
No 74
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A
Probab=99.86 E-value=3.3e-22 Score=177.61 Aligned_cols=125 Identities=20% Similarity=0.147 Sum_probs=93.5
Q ss_pred cceEe-eCCCC--CCCceEEEEEeCCCEEE---eCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhccc
Q psy14885 220 TDVVF-DLSKR--NSNTGFAFIINNENFQY---RLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNI 293 (483)
Q Consensus 220 ~~~~~-DgS~~--~~~~G~g~~~~~~~~~~---~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~ 293 (483)
..++| |||+. +|..|+|+++...+... .+...+||++||+.|++.||+.+ ...++.|+|||++|++.|-..
T Consensus 23 ~i~iytDGs~~~npG~~g~G~vi~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~---~~~~v~I~tDS~~vi~~iw~~ 99 (165)
T 3p1g_A 23 DYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALKMA---EGKKLNVYTDSRYAFATAHVH 99 (165)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEECSSCEEEEEEECTTCCHHHHHHHHHHHHHHHT---BTSEEEEEECCHHHHHHHHSC
T ss_pred CEEEEEEcccCCCCCceEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHc---cCceEEEEEchHHHHhhhhcc
Confidence 35667 99997 48899999887654322 34577899999999999999999 368999999999999998321
Q ss_pred CCcchH-HHHHHHHHHHHhhCCCceEEEEeccCCC-----CcchHHHhHHHHhhhcCCCC
Q psy14885 294 QQRNNI-IQLIKQEYYFASTNGSQISFMWIPSHSN-----IALNDKADQLAKNSINSKLL 347 (483)
Q Consensus 294 ~~~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g-----~~gNe~AD~lAk~a~~~~~~ 347 (483)
..+.++ ...+++.+......+..|+|.|||||+| ++|||.||+|||+|+..+.+
T Consensus 100 ~~g~~v~n~dl~~~l~~~l~~~~~v~~~wVkgH~g~~~~~~~gNe~AD~LA~~aa~~~~~ 159 (165)
T 3p1g_A 100 SEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRMADQAAREAAMKAVL 159 (165)
T ss_dssp CCSCCCSSHHHHHHHHHHTTSBSEEEEEECCSSCCSCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcccCHHHHHHHHHHHhcCCceEEEEecCCCCCCcCcchHHHHHHHHHHHHHhcCCC
Confidence 111111 0222222222223678999999999999 99999999999999987544
No 75
>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A
Probab=99.86 E-value=4.2e-22 Score=176.61 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=93.1
Q ss_pred CcceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc
Q psy14885 219 PTDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN 292 (483)
Q Consensus 219 p~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~ 292 (483)
...++| |||+.+ +++|+|+++.+.+....+ .+.+||++||+.|++.||+.+.+ ..++.|+|||++|++.|.+
T Consensus 5 ~~i~iytDGs~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~AL~~~~~--~~~v~I~tDS~~vi~~i~~ 82 (158)
T 2e4l_A 5 KLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKE--PCKIILTSDSQYMRQGIMT 82 (158)
T ss_dssp CEEEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSS--CCEEEEEECCHHHHHHHHT
T ss_pred CeEEEEEcccccCCCCcEEEEEEEEECCEEEEEecCcCCCccHHHHHHHHHHHHHHhcc--CCeEEEEeCHHHHHHHHHH
Confidence 445667 999974 788999999765432211 14579999999999999999864 3899999999999999987
Q ss_pred --------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885 293 --------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344 (483)
Q Consensus 293 --------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~ 344 (483)
.+.. .++ ...+++.+..+.. ...|.|.|||||+|+++||.||+|||+|+..
T Consensus 83 w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~ 145 (158)
T 2e4l_A 83 WIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQ-LHQIDWRWVKGHAGHAENERCDQLARAAAEA 145 (158)
T ss_dssp HHHHHHHTTTBCTTSSBCTTHHHHHHHHHHHT-TSEEEEEECCTTCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHccccccCCCcccCHHHHHHHHHHHc-cCcEEEEEccCCCCchhHHHHHHHHHHHHHh
Confidence 3321 111 1233334444444 4699999999999999999999999999987
No 76
>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...
Probab=99.86 E-value=5.6e-22 Score=175.28 Aligned_cols=125 Identities=18% Similarity=0.228 Sum_probs=94.7
Q ss_pred cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc-
Q psy14885 220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN- 292 (483)
Q Consensus 220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~- 292 (483)
..++| |||+.+ +++|+|+++.+.+....+ .+.+||++||+.|++.||+.+.+ ..++.|+|||++|++.|.+
T Consensus 4 ~~~iytDGs~~~n~~~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~~~~--~~~v~I~tDS~~vi~~i~~w 81 (155)
T 1jl1_A 4 QVEIFTAGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKE--HAEVILSTDSQYVRQGITQW 81 (155)
T ss_dssp CEEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCCS--CCEEEEEECCHHHHHHHHTT
T ss_pred eEEEEEccccCCCCCceEEEEEEEECCeEEEEecCCCCCcHHHHHHHHHHHHHHHhCc--CCcEEEEeCHHHHHHHHHHH
Confidence 45566 999975 778999999765432222 14678999999999999999974 4899999999999999986
Q ss_pred -------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCC
Q psy14885 293 -------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLL 347 (483)
Q Consensus 293 -------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~ 347 (483)
.+.. .++ ...+++.+..+.. ...|.|.|||||+|+++||.||+|||+|+..+..
T Consensus 82 ~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~ 146 (155)
T 1jl1_A 82 IHNWKKRGWKTADKKPVKNVDLWQRLDAALG-QHQIKWEWVKGHAGHPENERADELARAAAMNPTL 146 (155)
T ss_dssp HHHHHHTTTBCTTSCBCTTHHHHHHHHHHTT-TCEEEEEECCSSTTCHHHHHHHHHHHHHHHSCCB
T ss_pred HHHHhhcccccccCCccCCHHHHHHHHHHHc-cCceEEEEcCCCCCCHHHHHHHHHHHHHHhccch
Confidence 2211 111 1233444444544 4699999999999999999999999999987643
No 77
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus}
Probab=99.86 E-value=4e-22 Score=182.55 Aligned_cols=123 Identities=18% Similarity=0.270 Sum_probs=102.3
Q ss_pred cCCCcc-cccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCccc
Q psy14885 26 ELRCPQ-HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (483)
Q Consensus 26 ~~~C~~-gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wi 104 (483)
...||+ ||+.|+++||+++... ++|.+|+..|++.||+||+|+|.+|++||..++. ...||||+++..
T Consensus 63 ~~~Cp~~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~e~~fl~~~~~-----~~~~WIGl~~~~----- 131 (190)
T 3g8l_A 63 TGRGFEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP-----SDSYWIGLSYDN----- 131 (190)
T ss_dssp TTCEEEEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC-----SSCEEEEEEEET-----
T ss_pred CCCCCCCCcEEECCEEEEEEccc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhC-----cCCEEEEEEcCC-----
Confidence 577999 9999999999999995 9999999999999999999999999999999874 345666666432
Q ss_pred ccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 105 NEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 105 g~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+++.+ .+|.+.|.. +.++||.+.. +.|.+.+|. ..++||||++.
T Consensus 132 -----------------~~~~w~W~DGs~~~~--~~~~~~~~~-~~~~Cv~l~~----~~W~d~~C~--~~~~fICek~~ 185 (190)
T 3g8l_A 132 -----------------KKKDWAWINNGPSKL--ALNTMKYNI-RDGGCMLLSK----TRLDNDNCD--KSFICICGKRL 185 (190)
T ss_dssp -----------------TTTEEEETTTBCCCC--CCCGGGCCG-GGCSEEEECS----SCEEEECTT--SCEEEEEEEEC
T ss_pred -----------------CCCceEeCCCCcccc--cccCCCCCC-CCCCeEEEeC----CcEECCCCC--CCeeEEEeeCC
Confidence 467899999998765 567663332 3589999953 259999999 99999999985
Q ss_pred h
Q psy14885 185 Q 185 (483)
Q Consensus 185 ~ 185 (483)
.
T Consensus 186 ~ 186 (190)
T 3g8l_A 186 D 186 (190)
T ss_dssp C
T ss_pred C
Confidence 3
No 78
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*
Probab=99.85 E-value=2.1e-21 Score=162.29 Aligned_cols=110 Identities=19% Similarity=0.306 Sum_probs=93.7
Q ss_pred CeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccC
Q psy14885 38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFG 117 (483)
Q Consensus 38 ~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~ 117 (483)
.+||+++... ++|.+|+..|+..||+|++|+|.+|++||..++ ...+|||+++..
T Consensus 1 ~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~------~~~~WIGl~~~~------------------ 55 (113)
T 1rdl_1 1 KKYFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAIQNVA------KDVAFLGITDQR------------------ 55 (113)
T ss_dssp -CEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHC------SSCEEEEEECSS------------------
T ss_pred CeEEEEeCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHh------cCCEEEEeECCC------------------
Confidence 3699999995 999999999999999999999999999999887 245677776432
Q ss_pred CcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeecc
Q psy14885 118 GTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183 (483)
Q Consensus 118 g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~ 183 (483)
.++.|.|+||+++.+ .+|.+ +|++. +.++|+.+... +.|++.+|+ ..++||||++
T Consensus 56 ----~~~~~~W~dg~~~~y--~~W~~~~P~~~~~~~~Cv~~~~~---g~w~~~~C~--~~~~~ICe~~ 112 (113)
T 1rdl_1 56 ----TENVFEDLTGNRVRY--TNWNEGEPNNVGSGENCVVLLTN---GKWNDVPCS--DSFLVVCEFS 112 (113)
T ss_dssp ----STTCCEETTSCBCCC--CCBCTTCCCCCTTCCCEEEECTT---SCEEEECTT--SCBEEEEEEC
T ss_pred ----CCCcEEECCCCEeec--CCCCCCcCCCCCCCCCeeEECCC---CcEeccCCC--CCceEEEeeC
Confidence 468899999999965 89999 99873 46899999743 369999999 9999999986
No 79
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1
Probab=99.85 E-value=1.1e-21 Score=172.53 Aligned_cols=118 Identities=19% Similarity=0.292 Sum_probs=99.9
Q ss_pred ccCCeEEEEecCCC---CCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccc
Q psy14885 35 QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQR 111 (483)
Q Consensus 35 ~~~~~Cy~~~~~~~---~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~ 111 (483)
+|+++||+++.. . ++|.+|+..|+.+||+|++|++++|++||..++.. ..||||+++ .
T Consensus 2 ~~~~~CY~~~~~-~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~-----~~~WIGl~~-~------------ 62 (150)
T 1wk1_A 2 SSGSSGVKFLTV-NDDILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAAN-----TQFWIGLFK-N------------ 62 (150)
T ss_dssp CCSSCCCCSSSC-CSSCBCHHHHHHHHHHHTCEECCCCSHHHHHHHHHHTTT-----CEEEEEEEE-C------------
T ss_pred ccCCEEEEEEec-CCCccCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhcc-----CCEEEEEEe-C------------
Confidence 478999999988 7 99999999999999999999999999999999853 357888875 4
Q ss_pred cccccCCcCCCCCccccCCCCccc------cccccCCC-CCCCcccCCeEEEecc--cccccccccccCCCCceeeeeec
Q psy14885 112 RKWYFGGTQQSPNLWVNEDGTNLN------ELDAAFLP-EPADNVQRDYLAYSFS--QSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 112 ~~w~~~g~~~~~~~~~W~dg~~~~------~~~~~w~~-~P~~~~~~~Cv~~~~~--~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
.++.|.|+||+++. .| .+|.+ +|++.+.++||.+... ...+.|++.+|+ ..++||||+
T Consensus 63 ----------~~~~w~W~dg~~~~~~~~~~~y-~~W~~geP~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~ 129 (150)
T 1wk1_A 63 ----------SDGQFYWDRGQGINPDLLNQPI-TYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCA--TPRPFICQK 129 (150)
T ss_dssp ----------SSSCEEECCSSSSCCEECCCSC-CCBCTTCSCCCSSCCEEEEESSCSCGGGCEEEECTT--SCBCCCEEC
T ss_pred ----------CCCcEEeCCCCccccccccCCc-CCCCCCCCCCCCCCCcEEEeCccCCCCCEEeCcCcC--CCeeEEEee
Confidence 46789999999883 33 89999 9998557899999742 122469999999 999999999
Q ss_pred ch
Q psy14885 183 SI 184 (483)
Q Consensus 183 ~~ 184 (483)
++
T Consensus 130 ~~ 131 (150)
T 1wk1_A 130 HR 131 (150)
T ss_dssp CC
T ss_pred cC
Confidence 84
No 80
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...
Probab=99.85 E-value=1.1e-21 Score=177.55 Aligned_cols=122 Identities=17% Similarity=0.253 Sum_probs=102.8
Q ss_pred CCcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccC
Q psy14885 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (483)
Q Consensus 28 ~C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~ 107 (483)
.|+.+|+.++++||+++... ++|.+|+..|+..||+||+|+|.+|++||..++... ...||||+++.
T Consensus 54 ~~~~~~~~~~~~Cy~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~~~--------- 120 (177)
T 1pwb_A 54 ELFPNGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAK---NEAAFLSMTDS--------- 120 (177)
T ss_dssp HHTTTEEEETTEEEEEEEEE-EEHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHH---TCCEECSCBCS---------
T ss_pred hcCCCeEEECCEEEEEcCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHhcC---CCcEEEEEecc---------
Confidence 46789999999999999884 999999999999999999999999999999988543 24455555432
Q ss_pred cccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCc-ccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 108 DPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 108 ~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~-~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
..++.|.|+||+++.+ .+|.+ +|++. +.++||.+... +.|+|.+|+ ..++||||+
T Consensus 121 -------------~~~~~w~W~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~---g~W~d~~C~--~~~~fICe~ 177 (177)
T 1pwb_A 121 -------------KTEGKFTYPTGESLVY--SNWAPGEPNDDGGSEDCVEIFTN---GKWNDRACG--EKRLVVCEF 177 (177)
T ss_dssp -------------SSTTCCBCTTSCBCSC--CCBCTTCCCCGGGCCCEEEECTT---SCEEEECTT--SEEEEEEEC
T ss_pred -------------CcCCceEeCCcCCccc--CCcCCCcCCCCCCCCCcEEECCC---CcEeCCCCC--CCeeEEEeC
Confidence 2578899999999965 89999 99984 46899999642 369999999 999999995
No 81
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=99.85 E-value=2e-21 Score=163.31 Aligned_cols=114 Identities=19% Similarity=0.304 Sum_probs=94.5
Q ss_pred eE-EEEecCCCCCHHHHHHHhhh-cCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccccc
Q psy14885 39 SC-YRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYF 116 (483)
Q Consensus 39 ~C-y~~~~~~~~tw~~A~~~C~~-~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~ 116 (483)
+| |+++... ++|.+|+..|+. .||+||+|+|.+|++||..++... ....||||+++..
T Consensus 1 ~C~Y~~~~~~-~tw~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~~WIGl~~~~----------------- 60 (117)
T 1h8u_A 1 TCRYLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSAL--NQGQVWIGGRITG----------------- 60 (117)
T ss_dssp --CEEEEEEE-ECHHHHHHHHHHHHSSEECCCCSHHHHHHHHHHHTTC--SSSEEEEEEEEEC-----------------
T ss_pred CeEEEEeCCc-cCHHHHHHHhccCCCCeEEeecCHHHHHHHHHHHhcc--CCCCEEEcccccC-----------------
Confidence 49 9999995 999999999999 999999999999999999998644 2456777776421
Q ss_pred CCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 117 GGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 117 ~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
...++.|.|+||+++.+ .+|.+ +|++. +++|+.+....+ .|++.+|+ ..++||||+
T Consensus 61 ---~~~~~~~~W~dg~~~~y--~~W~~~~P~~~-~~~C~~~~~~~g--~W~~~~C~--~~~~fiCe~ 117 (117)
T 1h8u_A 61 ---SGRCRRFQWVDGSRWNF--AYWAAHQPWSR-GGHCVALCTRGG--YWRRAHCL--RRLPFICSY 117 (117)
T ss_dssp ---SSSCCEEEETTCCCCCC--CCBCSSSCCTT-SCSEEEEETTTT--CEEEECTT--SCEEEEEEC
T ss_pred ---CCCCCccEeCCCCcCCc--cCcCCCCCCCC-CCCCeEEECCCC--cCCCCCCC--CCcceeEeC
Confidence 12468899999999875 88999 99874 589999986543 59999999 999999995
No 82
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=99.84 E-value=3.1e-21 Score=169.29 Aligned_cols=121 Identities=15% Similarity=0.205 Sum_probs=102.4
Q ss_pred CcccccccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCc
Q psy14885 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDD 108 (483)
Q Consensus 29 C~~gw~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~ 108 (483)
+......|+++||+++... ++|.+|+..|+..||+|++|+|.+|++||..++.... ..||||+++..
T Consensus 27 ~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~---~~~WIGl~~~~--------- 93 (148)
T 3pbf_A 27 LQGSMLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN---NYVYLGMIEDQ--------- 93 (148)
T ss_dssp HTTSCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT---SCEEEEEEECS---------
T ss_pred HHhcceeeCCEEEEEcCCc-cCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC---CCEEEEeEecC---------
Confidence 3455678999999999995 9999999999999999999999999999999987542 35666666432
Q ss_pred ccccccccCCcCCCCCccccCCCCccccccccCCC-CCCCcccCCeEEEecccccccccccccCCCCceeeeeec
Q psy14885 109 PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP-EPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182 (483)
Q Consensus 109 ~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~-~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~ 182 (483)
..+.|.|+||+++.+ .+|.+ +|++.+.++|+.+... +.|.+.+|+ ..++||||.
T Consensus 94 -------------~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~---g~W~~~~C~--~~~~fICe~ 148 (148)
T 3pbf_A 94 -------------TPGDFHYLDGASVSY--TNWYPGEPRGQGKEKCVEMYTD---GTWNDRGCL--QYRLAVCEF 148 (148)
T ss_dssp -------------STTCEEETTSCBCCS--CCBCTTCCCSTTSCCEEEECTT---SCEEEECSC--SCEEEEEEC
T ss_pred -------------CCCceEeCCCCCccc--CCcCCCccCcCCCCCceEECCC---CcEecCCCC--CCeeEeeeC
Confidence 467899999999966 89999 9998656899999763 369999999 999999984
No 83
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*
Probab=99.84 E-value=4.9e-21 Score=162.99 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=93.9
Q ss_pred CCeEEEEecCCCCCHHHHHHHhhhcCCcccc--cCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCccccccc
Q psy14885 37 RDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKW 114 (483)
Q Consensus 37 ~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~--i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w 114 (483)
+++||+++... ++|.+|+..|+..||+||+ |++.+|++||..+ ... ....||||+ +..
T Consensus 1 g~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~~~i~s~~e~~~l~~~-~~~--~~~~~WIGl-~~~--------------- 60 (125)
T 1byf_A 1 MDYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAF-TEV--KGHDYWVGA-DNL--------------- 60 (125)
T ss_dssp -CEEEEEEEEE-ECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHHH-HHH--HTCCEEEEE-EST---------------
T ss_pred CCeEEEEeCCC-CCHHHHHHHHHHcCCEeeecCCCCHHHHHHHHHh-cCC--CCCCEEEec-ccC---------------
Confidence 47899999995 9999999999999999999 9999999999988 211 234566666 332
Q ss_pred ccCCcCCCCCc--cccCCCCcc-ccccc-cCCC-CCCCcc-cCCeEEEecccccccccccccCCCCceeeeeecch
Q psy14885 115 YFGGTQQSPNL--WVNEDGTNL-NELDA-AFLP-EPADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 115 ~~~g~~~~~~~--~~W~dg~~~-~~~~~-~w~~-~P~~~~-~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++. |.|+||+++ .+ . +|.+ +|++.. .++|+.+. ..+ +.|++.+|. ..++||||+++
T Consensus 61 -------~~~~~~w~W~dg~~~~~~--~~~W~~~~P~~~~~~~~Cv~~~-~~~-~~W~d~~C~--~~~~fICe~~~ 123 (125)
T 1byf_A 61 -------QDGAYNFLWNDGVSLPTD--SDLWSPNEPSNPQSWQLCVQIW-SKY-NLLDDVGCG--GARRVICEKEL 123 (125)
T ss_dssp -------TTCTTCCEETTSCBCCTT--CTTBCTTCSCSCTTSCCEEEEE-TTT-TEEEEECSC--SCEEEEEEEEC
T ss_pred -------CCCceeEEECCCCCCccc--ccCcCCCcCCCCCCCCCceEEE-CCC-CcEECcCCC--CceeEEEeeeC
Confidence 4667 999999998 54 7 8999 998743 57999998 322 369999999 99999999984
No 84
>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A
Probab=99.83 E-value=1.8e-21 Score=173.83 Aligned_cols=124 Identities=13% Similarity=0.163 Sum_probs=92.7
Q ss_pred cceEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcc-
Q psy14885 220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDN- 292 (483)
Q Consensus 220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~- 292 (483)
..++| |||+.+ +.+|+|+++.+.+....+ ...+||++||+.|++.||+.+.+ ..+|.|+|||++|++.|.+
T Consensus 8 ~i~iytDGs~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~--~~~v~I~tDS~~vi~~i~~~ 85 (166)
T 1ril_A 8 RVALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALKE--PCEVDLYTDSHYLKKAFTEG 85 (166)
T ss_dssp CCCEEEEEEESSTTEEEEEEEEECBTTBCCEECCEEEEECHHHHHHHHHHHHHHSCCS--CCEEEEECCCHHHHHHHHSS
T ss_pred cEEEEECccccCCCCCEEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHhcc--CCeEEEEeChHHHHHHHhhh
Confidence 44566 999975 778999999754322111 14679999999999999998864 3589999999999999988
Q ss_pred --------cCCc---chH-HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCC
Q psy14885 293 --------IQQR---NNI-IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKL 346 (483)
Q Consensus 293 --------~~~~---~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~ 346 (483)
.+.. .++ ...+++.+..+.. ...|+|.|||||+|+++|+.||+|||+|+....
T Consensus 86 w~~~W~~~~w~~~~g~~v~n~~l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~~~ 150 (166)
T 1ril_A 86 WLEGWRKRGWRTAEGKPVKNRDLWEALLLAMA-PHRVRFHFVKGHTGHPENERVDREARRQAQSQA 150 (166)
T ss_dssp HHHHHHHTTSBCTTSSBCTTHHHHHHHHHHHT-TSEEECCCCCGGGSCTHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHhcccccccCCccCcHHHHHHHHHHHh-cCeEEEEEeeCCCCchhHHHHHHHHHHHHHHhh
Confidence 2221 111 1234444444444 359999999999999999999999999998754
No 85
>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}
Probab=99.81 E-value=3.6e-20 Score=164.25 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=87.7
Q ss_pred CcceEe-eCCCCC--CC-----ceEEEEEeCCCE------EEeC-CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEecc
Q psy14885 219 PTDVVF-DLSKRN--SN-----TGFAFIINNENF------QYRL-PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDN 283 (483)
Q Consensus 219 p~~~~~-DgS~~~--~~-----~G~g~~~~~~~~------~~~l-~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs 283 (483)
...++| |||+.+ |+ +|+|+++...+. .+.. .+..+++.||+.|+..||+.+.+.+ .+|.|+|||
T Consensus 6 ~evviYTDGsc~gNpgp~~~~~aG~Gv~~~~~~~~~~~~~~~~~~tnn~te~~Aei~Al~~al~~al~~~-~~v~I~TDS 84 (165)
T 2lsn_A 6 YEGVFYTDGSAIKSPDPTKSNNAGMGIVHATYKPEYQVLNQWSIPLGNHTAQMAEIAAVEFACKKALKIP-GPVLVITDS 84 (165)
T ss_dssp CSEEEEEEEEEEECSSCTTCEEEEEEEEEECCSSSCCEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHSS-SCEEEEESC
T ss_pred ceEEEEEcCCCCCCCCCCCCCcEEEEEEEEECCCccEEeccccCCchHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEeCh
Confidence 456677 999865 44 899999864221 1222 2567788899999988888876543 579999999
Q ss_pred HHHHHhhcc--------cCC---cchH-HHHHHHHHHHHhhCCCceEEEEeccCCCC------cchHHHhHHHHhhhc
Q psy14885 284 KSVLNGIDN--------IQQ---RNNI-IQLIKQEYYFASTNGSQISFMWIPSHSNI------ALNDKADQLAKNSIN 343 (483)
Q Consensus 284 ~~~~~~l~~--------~~~---~~~~-~~~i~~~~~~~~~~~~~v~~~WvpgH~g~------~gNe~AD~lAk~a~~ 343 (483)
++|++.|.. .+. +.++ -..+++.+..+......|+|.|||||+|+ +|||.||+||++|+.
T Consensus 85 ~Yvi~~it~w~~~Wk~ngw~~~~~~pVkN~dL~~~l~~~~~~~~~v~~~~VkgH~g~~~~~~~~gNe~AD~LA~~gA~ 162 (165)
T 2lsn_A 85 FYVAESANKELPYWKSNGFVNNKKKPLKHISKWKSIAECLSMKPDITIQHEKGHQPTNTSIHTEGNALADKLATQGSY 162 (165)
T ss_dssp HHHHHHHHTHHHHHHHTTSCSCSSSCCSSHHHHHHHHHHHHHCTTCEEEECCSSSCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhheeccccccCCCcccCHHHHHHHHHHHhCCCCEEEEEEeCCCCccCCCCChHHHHHHHHHHHhhh
Confidence 999999964 111 1111 12333444444445678999999999994 689999999999874
No 86
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=99.80 E-value=2.5e-19 Score=155.77 Aligned_cols=120 Identities=17% Similarity=0.250 Sum_probs=98.0
Q ss_pred ceEe-eCCCCC--CCceEEEEEeCCC---E--EE-eCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhc
Q psy14885 221 DVVF-DLSKRN--SNTGFAFIINNEN---F--QY-RLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGID 291 (483)
Q Consensus 221 ~~~~-DgS~~~--~~~G~g~~~~~~~---~--~~-~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~ 291 (483)
.++| |||+.+ |.+|+|+++.+.. . .+ ...+.+||++||+.|++.||+.+.+.+.+++.|+|||+++++.|.
T Consensus 4 ~~iy~DGs~~~~~g~~g~G~v~~~~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~v~i~tDS~~vv~~i~ 83 (141)
T 3hst_B 4 VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMS 83 (141)
T ss_dssp EEEEEEEEESSSSEEEEEEEEEEETTSCSEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHT
T ss_pred EEEEEecCCCCCCCCcEEEEEEEeCCCCcEEEeeeccCCCCchHHHHHHHHHHHHHHHHHCCCceEEEEeChHHHHHHHh
Confidence 3456 999875 6889999997632 1 11 112478999999999999999999888899999999999999999
Q ss_pred ccCC-cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885 292 NIQQ-RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344 (483)
Q Consensus 292 ~~~~-~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~ 344 (483)
+.++ .+..+..+.+.+..+..++..|+|.|||+ ++|+.||+|||+|+..
T Consensus 84 ~~~~~~~~~l~~~~~~i~~l~~~~~~v~~~~V~~----~~N~~AD~LA~~a~~~ 133 (141)
T 3hst_B 84 GRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR----ARNTYADRLANDAMDA 133 (141)
T ss_dssp TSSCCCSHHHHHHHHHHHHHHTTSSEEEEEECCG----GGCHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHhcCCeEEEEEcCC----cccHHHHHHHHHHHHH
Confidence 8764 45556666666777777789999999995 7999999999999865
No 87
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=99.79 E-value=2.8e-19 Score=155.06 Aligned_cols=120 Identities=16% Similarity=0.243 Sum_probs=94.3
Q ss_pred ceEe-eCCCCC--CCceEEEEEeCC-CE---EE-eCCCCCcchHHHHHHHHHHHHHhHhcCCc----eEEEEeccHHHHH
Q psy14885 221 DVVF-DLSKRN--SNTGFAFIINNE-NF---QY-RLPHEASIFTAEAIAIFYCIKKISDMKIK----KAIIFSDNKSVLN 288 (483)
Q Consensus 221 ~~~~-DgS~~~--~~~G~g~~~~~~-~~---~~-~l~~~~s~~~AEl~ai~~Al~~~~~~~~~----~~~I~tDs~~~~~ 288 (483)
.++| |||+.+ |++|+|+++.+. +. .+ ...+.+||++||+.|++.||+.+.+.+.+ ++.|+|||+++++
T Consensus 4 ~~iy~DGs~~~n~g~~G~G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~~~~~v~i~tDS~~vi~ 83 (140)
T 3u3g_D 4 IIIYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSELIVR 83 (140)
T ss_dssp EEEEEEEEESSTTEEEEEEEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGGGGGGTTCEEEEEESCHHHHH
T ss_pred EEEEEecCCCCCCCCcEEEEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeChHHHHH
Confidence 4566 999965 789999999763 22 11 11245799999999999999999877777 9999999999999
Q ss_pred hhcccCC-cchHHHHHHHHHHHH-hhCCCceEEEEeccCCCCcchHHHhHHHHhhhcC
Q psy14885 289 GIDNIQQ-RNNIIQLIKQEYYFA-STNGSQISFMWIPSHSNIALNDKADQLAKNSINS 344 (483)
Q Consensus 289 ~l~~~~~-~~~~~~~i~~~~~~~-~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~ 344 (483)
.|++.++ .+..+..+.+.+..+ ..+...|+|.||| .++|+.||+|||+|+..
T Consensus 84 ~i~~~~~~~~~~l~~~~~~i~~l~~~~~~~v~~~~V~----~~~N~~AD~LA~~a~~~ 137 (140)
T 3u3g_D 84 QMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIP----REKNARADELVNEAIDK 137 (140)
T ss_dssp HHTTSSCCCCGGGHHHHHHHHHHHHHHCTTCEEEECC----GGGGHHHHHHHHHHHHH
T ss_pred HhCCCcccCCHHHHHHHHHHHHHhhcCCCcEEEEEcC----chhhHHHHHHHHHHHHh
Confidence 9998765 344444555556666 5666799999999 47999999999999864
No 88
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=99.76 E-value=6.1e-19 Score=157.44 Aligned_cols=115 Identities=16% Similarity=0.331 Sum_probs=92.7
Q ss_pred eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118 (483)
Q Consensus 39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g 118 (483)
.||+++... ++|.+|+..|+.+||+||+|++.+|++||..++.. ....||||++ +
T Consensus 1 wcY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~---~~~~~WIGl~-----------~---------- 55 (164)
T 3cfw_A 1 WTYHYSEKP-MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPF---SRSYYWIGIR-----------K---------- 55 (164)
T ss_dssp CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCC---CTTCEEESEE-----------E----------
T ss_pred CeEEEecCC-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHHhcc---CCccEEEeEE-----------C----------
Confidence 499999994 99999999999999999999999999999998852 2334555554 3
Q ss_pred cCCCCCccccCCCC-ccc-cccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885 119 TQQSPNLWVNEDGT-NLN-ELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 119 ~~~~~~~~~W~dg~-~~~-~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+ ++. .| .+|.+ +|++.. .++||.+.... ..+.|++.+|+ ..++||||+++
T Consensus 56 ---~~~~~~W~dg~~~~~~~y-~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~ 121 (164)
T 3cfw_A 56 ---IGGIWTWVGTNKSLTEEA-ENWGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACH--KLKAALCYTAS 121 (164)
T ss_dssp ---ETTEEEETTTCCBCCTTT-CCBCTTCCCCGGGCCCEEEECTTCSSSTTCEEEECTT--SCEEEEEEECC
T ss_pred ---CCCEEEECCCCccccccc-CCCCCCCCCCCCCCccceeeeccCCCCCCceeCCCCC--CCcEeEEccCC
Confidence 24689999998 443 23 88999 998764 68999997532 23469999999 99999999985
No 89
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=99.76 E-value=1.1e-18 Score=154.41 Aligned_cols=116 Identities=19% Similarity=0.359 Sum_probs=92.3
Q ss_pred eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118 (483)
Q Consensus 39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g 118 (483)
.||+++... ++|.+|+..|+.+||+||+|+|.+|++||..++... ...||||++ +
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~-----------~---------- 55 (157)
T 1g1t_A 1 WSYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYS---PSYYWIGIR-----------K---------- 55 (157)
T ss_dssp CEEEECSSC-BCHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCCC---TTCEEESEE-----------E----------
T ss_pred CceEeCCCc-cCHHHHHHHHHHCCCEEcccCCHHHHHHHHHHhccC---CCCEEEEEE-----------C----------
Confidence 389999995 999999999999999999999999999999988531 234555554 3
Q ss_pred cCCCCCccccCCCC-ccccccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885 119 TQQSPNLWVNEDGT-NLNELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 119 ~~~~~~~~~W~dg~-~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+ ++.....+|.+ +|++.. .++||.+.... ..+.|+|.+|+ ..++||||+++
T Consensus 56 ---~~~~~~W~dg~~~~~~~y~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~ 121 (157)
T 1g1t_A 56 ---VNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCS--KKKLALCYTAA 121 (157)
T ss_dssp ---ETTEEEETTTCCBCCTTTCCBCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTT--SCBEEEEEECC
T ss_pred ---CCCeeEEeCCCccCCcccCCCCCCcCCCCCCCCCceEEeCcCCCCCCccccCCCC--CCcceEeCcCC
Confidence 24689999998 44311288999 998754 68999997532 12469999999 99999999985
No 90
>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A
Probab=99.76 E-value=1.8e-18 Score=151.82 Aligned_cols=119 Identities=15% Similarity=0.198 Sum_probs=92.6
Q ss_pred eEe-eCCCC---CCCceE-EEEEeCCCEEE-----eCC---CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHH
Q psy14885 222 VVF-DLSKR---NSNTGF-AFIINNENFQY-----RLP---HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLN 288 (483)
Q Consensus 222 ~~~-DgS~~---~~~~G~-g~~~~~~~~~~-----~l~---~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~ 288 (483)
.+| |||+. +|++|+ |+++.+.+... .+. ..+||++||+.|++.||+.+.+.+.+++.|+|||+++++
T Consensus 3 ~iy~DGs~~~~n~g~~G~~G~vi~~~g~~~~~~~~~~~~~~~~~tnn~aEl~A~~~aL~~a~~~g~~~v~i~tDS~~vi~ 82 (149)
T 2ehg_A 3 IGYFDGLCEPKNPGGIATFGFVIYLDNRKIEGYGLAEKPFSINSTNNVAEYSGLICLMETMLRLGISSPIIKGDSQLVIK 82 (149)
T ss_dssp EEEEEEEEESSSSSSEEEEEEEEECSSCEEEEEEECSCTTCTTCCHHHHHHHHHHHHHHHHHHHTCCSCEEEESCHHHHH
T ss_pred EEEEeeccCCCCCChheEEEEEEEECCEEEEEeccccCCCCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEEeChHHHHH
Confidence 455 99987 288896 99987644321 122 378999999999999999999888889999999999999
Q ss_pred hhcccCCc-chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCC
Q psy14885 289 GIDNIQQR-NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSK 345 (483)
Q Consensus 289 ~l~~~~~~-~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~ 345 (483)
.+++.+.. +.....+.+.+..+..+. .|+|.|||+| +|+.||+|||+|+...
T Consensus 83 ~i~~~w~~~~~~~~~l~~~i~~l~~~~-~v~~~~V~~~----~N~~AD~LA~~a~~~~ 135 (149)
T 2ehg_A 83 QMNGEYKVKAKRIIPLYEKAIELKKKL-NATLIWVPRE----ENKEADRLSRVAYELV 135 (149)
T ss_dssp HHTTSSCCCCTTHHHHHHHHHHHHHHH-TCEEEECCGG----GCHHHHHHHHHHHHHH
T ss_pred HHhCccccCCHHHHHHHHHHHHHHhcC-CEEEEEcCCc----ccHHHHHHHHHHHHhh
Confidence 99987552 333445555555554444 5999999985 9999999999998653
No 91
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=99.75 E-value=1.4e-18 Score=154.69 Aligned_cols=116 Identities=14% Similarity=0.280 Sum_probs=92.5
Q ss_pred eEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCCcccccCcccccccccCC
Q psy14885 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118 (483)
Q Consensus 39 ~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~~Wig~~~~~~~~w~~~g 118 (483)
.||+++... ++|.+|+..|+.+||+||+|++++|++||..++... ...||||++ +
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~---~~~~WIGl~-----------~---------- 55 (162)
T 1g1s_A 1 WTYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYY---SSYYWIGIR-----------K---------- 55 (162)
T ss_dssp CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCCHHHHHHHHHHSCCC---TTCEEEEEE-----------E----------
T ss_pred CeEEEecCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhccC---CCCEEEeEE-----------C----------
Confidence 489999995 999999999999999999999999999999988532 234555554 3
Q ss_pred cCCCCCccccCCCC-ccccccccCCC-CCCCcc-cCCeEEEeccc--ccccccccccCCCCceeeeeecch
Q psy14885 119 TQQSPNLWVNEDGT-NLNELDAAFLP-EPADNV-QRDYLAYSFSQ--SLKRWGFERVTGMEPLLFICEASI 184 (483)
Q Consensus 119 ~~~~~~~~~W~dg~-~~~~~~~~w~~-~P~~~~-~~~Cv~~~~~~--~~~~W~~~~C~~~~~~~fvCe~~~ 184 (483)
.++.|.|+||+ ++.....+|.+ +|++.. .++||.+.... ..+.|++.+|+ ..++||||+++
T Consensus 56 ---~~~~~~W~dg~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~--~~~~fICe~~~ 121 (162)
T 1g1s_A 56 ---NNKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCL--KKKHALCYTAS 121 (162)
T ss_dssp ---ETTEEEETTTCCBCCTTTCCBCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTT--SCEEEEEEECC
T ss_pred ---CCCCeEECCCCccCCcccCccCCCCCCCCCCCcceEEEeccCCCCCCeEECCCCC--CCCCEEEEeCC
Confidence 24789999996 55411288999 998754 68999997532 22469999999 99999999974
No 92
>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B
Probab=99.73 E-value=5.1e-18 Score=180.21 Aligned_cols=114 Identities=18% Similarity=0.260 Sum_probs=89.4
Q ss_pred ceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCC--
Q psy14885 221 DVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQ-- 295 (483)
Q Consensus 221 ~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~-- 295 (483)
.++| |||+.+ |..|+|+++..+.........+||++||+.|++.||+. ...++.|+|||++|+++|++...
T Consensus 437 ~~iytDGs~~~n~g~~g~G~v~~~~~~~~~~~~~~TNn~aEl~A~i~aL~~----~~~~v~I~tDS~~v~~~i~~~~~~~ 512 (555)
T 1mu2_A 437 ETFYTDGSCNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTD----SGPKVNIIVDSQYVMGIVASQPTES 512 (555)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHT----SCSEEEEEESCHHHHHHHHTCCSEE
T ss_pred eEEEEcccccCCCCCceEEEEEEeCCEeeccCCCCCHHHHHHHHHHHHHHc----CCCeEEEEEehHHHHHHHhcccccc
Confidence 4566 999875 66899999976544322235789999999999999997 56899999999999999997432
Q ss_pred cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhh
Q psy14885 296 RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI 342 (483)
Q Consensus 296 ~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~ 342 (483)
..++...+.+ +...+..|.|.|||||+|++|||.||+|||+|+
T Consensus 513 ~~~l~~~~~~----~~~~~~~v~~~wV~~H~g~~~Ne~AD~LA~~a~ 555 (555)
T 1mu2_A 513 ESKIVNQIIE----EMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI 555 (555)
T ss_dssp SCHHHHHHHH----HHHHCSEEEEEECCSSSCCTTHHHHHHHHHTTC
T ss_pred cHHHHHHHHH----HhccCCcEEEEEEECCCCChhHHHHHHHHHhhC
Confidence 3344443333 223467899999999999999999999999885
No 93
>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...
Probab=99.73 E-value=3.8e-18 Score=181.22 Aligned_cols=114 Identities=15% Similarity=0.258 Sum_probs=87.3
Q ss_pred cceEe-eCCCCC--CCceEEEEEeCCCEEEeCCCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCCc
Q psy14885 220 TDVVF-DLSKRN--SNTGFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQR 296 (483)
Q Consensus 220 ~~~~~-DgS~~~--~~~G~g~~~~~~~~~~~l~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~~ 296 (483)
..++| |||+.+ |..|+|+++..+.........+||++||+.|++.||+.+ ..++.|+||||+|+++|++....
T Consensus 439 ~~~iytDGs~~~n~g~~g~g~v~~~~~~~~~~~~~~TNn~aEl~Ai~~aL~~~----~~~v~I~tDS~~vi~~i~~~~~~ 514 (557)
T 2zd1_A 439 AETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDS----GLEVNIVTDSQYALGIIQAQPDK 514 (557)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEETTSCEEEEEECSCCHHHHHHHHHHHHHHHS----CSEEEEEECCHHHHHHHTTCCSE
T ss_pred CEEEEEccCCCCCCCceEEEEEEECCcEEEecCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeChHHHHHHHhcCCcc
Confidence 35666 999864 678999998765433222357899999999999999998 57999999999999999985443
Q ss_pred --chHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhh
Q psy14885 297 --NNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNS 341 (483)
Q Consensus 297 --~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a 341 (483)
.++...+.+ .+.. ...|+|.|||||+|++|||.||+||++|
T Consensus 515 ~~~~l~~~~~~---~l~~-~~~v~~~wV~~H~g~~~Ne~AD~LA~~a 557 (557)
T 2zd1_A 515 SESELVNQIIE---QLIK-KEKVYLAWVPAHKGIGGNEQVDKLVSAG 557 (557)
T ss_dssp ESSHHHHHHHH---HHHH-CSEEEEEECCSSSCCTTCCGGGGCC---
T ss_pred CCHHHHHHHHH---HHhc-CCCEEEEEcCCCCCChhHHHHHHHHhcC
Confidence 344444333 2333 4689999999999999999999999986
No 94
>1zbf_A Ribonuclease H-related protein; RNAse H, RNA/DNA hybrid, DDE motif, hydrolase; 1.50A {Bacillus halodurans} SCOP: c.55.3.1 PDB: 1zbi_A 2g8u_A 2g8i_A 2g8h_A 2g8k_A 2g8f_A 2g8v_A 2g8w_A 3ey1_A* 1zbl_A 3d0p_A* 3i8d_A* 2r7y_A*
Probab=99.37 E-value=3.1e-13 Score=116.39 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=84.3
Q ss_pred eEe-eCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccCC
Q psy14885 222 VVF-DLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQ 295 (483)
Q Consensus 222 ~~~-DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~~ 295 (483)
.+| |||+.+ |++|+|+++...+..... ...+||++||++|++.||+.+.+... ++.|+|||++|++.+.+.+.
T Consensus 13 ~iy~DGa~~gNpG~~G~G~vl~~~g~~~~~~~~~~~~TNN~aEl~A~i~aL~~~~~~~~-~v~i~tDS~~vi~w~~~~~~ 91 (142)
T 1zbf_A 13 SLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNS-RKPIYSNSQTAIKWVKDKKA 91 (142)
T ss_dssp SEEEEEEECSSSEEEEEEEEETTTCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHTTC-CCCEEESCHHHHHHHHHTCC
T ss_pred EEEEeeccCCCCCCeEEEEEEEeCCEEEEEecccCCcCcHHHHHHHHHHHHHHHHhCCC-eEEEEEehHHHHHHHHcCCc
Confidence 355 999865 888999999754433222 13679999999999999999987766 99999999999999988652
Q ss_pred ---------cchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhH
Q psy14885 296 ---------RNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQ 336 (483)
Q Consensus 296 ---------~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~ 336 (483)
..++.+.+.++...+.. ..++...|+-|++.-||..||.
T Consensus 92 k~~~~~~v~n~dLw~~l~~~~~w~~~--~~~~~~~~kw~~~~~ge~pad~ 139 (142)
T 1zbf_A 92 KSTLVRNEETALIWKLVDEAEEWLNT--HTYETPILKWQTDKWGEIKADY 139 (142)
T ss_dssp CCCCCCSTTTHHHHHHHHHHHHHHHH--CCCCCCEEECCHHHHCSCTTCC
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHhh--CCCceeEEEeccCccCcCcccc
Confidence 12445555554444544 4566677889999999999984
No 95
>4htu_A Ribonuclease H, RNAse H; 5-chloro-2'-deoxyuridine, W-C base PAIR, wobble base PAIR, D helix; HET: DNA UCL; 1.49A {Bacillus halodurans} PDB: 3d0p_A* 4hue_A* 4huf_A* 4hug_A* 1zbf_A 1zbi_A 2g8u_A 3uld_A* 3ey1_A* 3twh_A* 2g8f_A 2g8v_A 2g8w_A 2g8i_A 2g8h_A 2g8k_A 3i8d_A* 2r7y_A* 1zbl_A
Probab=99.15 E-value=3.7e-11 Score=101.35 Aligned_cols=92 Identities=10% Similarity=0.117 Sum_probs=64.1
Q ss_pred eEeeCCCCC--CCceEEEEEeCCCEEEeC---CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccHHHHHhhcccC--
Q psy14885 222 VVFDLSKRN--SNTGFAFIINNENFQYRL---PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQ-- 294 (483)
Q Consensus 222 ~~~DgS~~~--~~~G~g~~~~~~~~~~~l---~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~~~~~~l~~~~-- 294 (483)
+++|||+.+ |+.|+|.|+...+..... .+.+||++||++|++.||+.+.+.+.. +.|+||||+|++.|.+..
T Consensus 8 iytDGac~GNPGp~G~ggV~~~~g~~~~~~g~~~~tTNN~aEl~A~i~aL~~l~~~~~~-v~i~tDSqyVi~wi~~~~~k 86 (134)
T 4htu_A 8 LSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSR-KPIYSNSQTAIKWVKDKKAK 86 (134)
T ss_dssp EEEEEEEETTTEEEEEEEEETTTCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHTTCC-CCEEESCHHHHHHHHHTCCC
T ss_pred EEEeeccCCCCCCeEEEEEEEECCEEEEEecCCCCCchHHHHHHHHHHHHHHHHhCCCC-EEEEcchHHHHHHHHcCCcc
Confidence 344999866 889996666554432211 247899999999999999999875544 899999999999997621
Q ss_pred -------CcchHHHHHHHHHHHHhhCC
Q psy14885 295 -------QRNNIIQLIKQEYYFASTNG 314 (483)
Q Consensus 295 -------~~~~~~~~i~~~~~~~~~~~ 314 (483)
+..++.+.+.++...+....
T Consensus 87 t~~~~~vkN~dLw~~ld~~~~~l~~~~ 113 (134)
T 4htu_A 87 STLVRNEETALIWKLVDEAEEWLNTHT 113 (134)
T ss_dssp CCCCCSSTTHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCccCHHHHHHHHHHHHHHHhCC
Confidence 12355555555555555433
No 96
>3k7b_A Protein A33; C-type lectin-like domain, homodimer, poxvirus, EEV, EV, VIR protein; 2.10A {Vaccinia virus WR}
Probab=98.37 E-value=5.8e-08 Score=75.85 Aligned_cols=46 Identities=26% Similarity=0.422 Sum_probs=43.2
Q ss_pred cccCCeEEEEecCCCCCHHHHHHHhhhcCCcccccCCHhHHHHHHHHh
Q psy14885 34 VQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQL 81 (483)
Q Consensus 34 ~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~ 81 (483)
+.|++.||+|+..+ ++|++|+..|.+.|++|+++++..+ .+|..++
T Consensus 14 i~f~~~CY~f~~~p-kTW~eA~~~C~~~G~~Lpsi~s~~~-~wL~~YL 59 (96)
T 3k7b_A 14 LYYQGSCYILHSDY-QMFSDAAANCTAESSTLPNKSDVMI-TWLIDYV 59 (96)
T ss_dssp EEETTEEEEEEEEE-ECHHHHHHHHHHTTCBCCCHHHHTT-STTHHHH
T ss_pred eeeCCeeEEEeCCC-CCHHHHHHHHHHcCCccCCcccchh-HHHHHHH
Confidence 56789999999997 9999999999999999999999988 9999888
No 97
>3fd4_A Glycoprotein GP42; C type lectin, virus entry, membrane fusion, HOST-virus interaction, lectin, membrane, transmembrane, viral protein; 2.40A {Human herpesvirus 4} PDB: 1kg0_C
Probab=94.65 E-value=0.1 Score=44.27 Aligned_cols=117 Identities=15% Similarity=0.194 Sum_probs=77.4
Q ss_pred cCCCccc--ccccCCeEEEEecCCCCCHHHHHHHhhhcC--CcccccCCHhHHHHHHHHhhhcCCCCCceeeecccCCCC
Q psy14885 26 ELRCPQH--WVQYRDSCYRFVKSPLKTRNDAKLNCKSLD--SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPN 101 (483)
Q Consensus 26 ~~~C~~g--w~~~~~~Cy~~~~~~~~tw~~A~~~C~~~g--~~L~~i~s~~e~~~l~~~~~~~~~~~~~~wig~~~~~~~ 101 (483)
+..|+.. -+.+.+.||+|... ..+|+..-..|++.. -.|-+... ...-+++..++ .++.+|+|.-+...+
T Consensus 67 C~~C~~r~~tFs~~~~CyYftp~-kytf~~CF~aCa~ls~C~yfY~Pq~-~~~PiV~~NLk----~~eslWVGifK~~~~ 140 (191)
T 3fd4_A 67 CTYCNTREYTFSYKGCCFYFTKK-KHTWNGCFQACAELYPCTYFYGPTP-DILPVVTRNLN----AIESLWVGVYRVGEG 140 (191)
T ss_dssp SCCCCTTTCSEEETTEEEEECSS-CBCTTHHHHHHHHHSTTEEECCCCT-TTHHHHHTTSC----TTCEEEECCEECTTC
T ss_pred CeecCcceeEEEecceEEEeCcc-cccHHHHHHHHHhhcCeeEEecCCc-cCChhhhcccC----CcCcEEEEEEEcCcc
Confidence 5667654 25678899999999 599999999999863 33444432 24556666554 456777777765545
Q ss_pred cccccCcccccccccCCcCCCCCccccCCCCccccccccCCCCCCCcccCCeEEEecccccccccccccCCCCceeeeee
Q psy14885 102 LWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181 (483)
Q Consensus 102 ~Wig~~~~~~~~w~~~g~~~~~~~~~W~dg~~~~~~~~~w~~~P~~~~~~~Cv~~~~~~~~~~W~~~~C~~~~~~~fvCe 181 (483)
.|..+ |+... .-|. .-+..|..+...+.. .|.-..|+ ..++.+|.
T Consensus 141 ~W~sL-----------------------Dn~n~----~V~D-----i~gSyCaYvt~~S~~-P~s~~eC~--~~K~CLC~ 185 (191)
T 3fd4_A 141 NWTSL-----------------------DGGTF----KVYQ-----IFGSHCTYVSKFSTV-PVSHHECS--FLKPCLCV 185 (191)
T ss_dssp CEEET-----------------------TEEEE----CCBC-----SSSSSCEEEESSCSS-CEECSCTT--SCBCBEEE
T ss_pred ceEEc-----------------------cCCce----EEEE-----eccCeeeEEeccccc-ccceeecc--ccceeEEe
Confidence 55554 44411 1121 114799999766543 48888999 99999997
Q ss_pred cc
Q psy14885 182 AS 183 (483)
Q Consensus 182 ~~ 183 (483)
-.
T Consensus 186 s~ 187 (191)
T 3fd4_A 186 SQ 187 (191)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 98
>1o7b_T Tumor necrosis factor-inducible protein TSG-6; hyaluronan-binding domain, carbohydrate-binding domain, LINK module, cell adhesion, glycoprotein; NMR {Homo sapiens} SCOP: d.169.1.4 PDB: 1o7c_T 2pf5_A*
Probab=69.33 E-value=2.1 Score=33.50 Aligned_cols=21 Identities=29% Similarity=0.238 Sum_probs=19.8
Q ss_pred CCCHHHHHHHhhhcCCccccc
Q psy14885 48 LKTRNDAKLNCKSLDSDLANV 68 (483)
Q Consensus 48 ~~tw~~A~~~C~~~g~~L~~i 68 (483)
+.|+.+|+..|+..|++|++.
T Consensus 13 ~l~f~eA~~aC~~~ga~LAs~ 33 (98)
T 1o7b_T 13 KLTYAEAKAVCEFEGGHLATY 33 (98)
T ss_dssp CBCHHHHHHHHHHSSCEECCH
T ss_pred ccCHHHHHHHHHhcCCccCCH
Confidence 489999999999999999988
No 99
>2jcq_A CD44 antigen; sugar-binding protein, hyauronan, LINK-domain, proteoglycan, polymorphism, blood group antigen, alternative splicing, lectin; HET: NAG GCU 5AX GOL; 1.25A {Mus musculus} PDB: 2jcr_A* 2jcp_A 2i83_A 1poz_A 1uuh_A
Probab=56.90 E-value=4.8 Score=34.07 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=19.8
Q ss_pred CCCHHHHHHHhhhcCCccccc
Q psy14885 48 LKTRNDAKLNCKSLDSDLANV 68 (483)
Q Consensus 48 ~~tw~~A~~~C~~~g~~L~~i 68 (483)
+.++.+|+..|+..|++|++.
T Consensus 25 ~l~f~eA~~aC~~~gA~LAs~ 45 (154)
T 2jcq_A 25 SISRTEAADLCQAFNSTLPTM 45 (154)
T ss_dssp CBCHHHHHHHHHHTTCBCCCH
T ss_pred ccCHHHHHHHHHhcCCEeCCH
Confidence 589999999999999999988
No 100
>1rw3_A POL polyprotein; RNA and DNA dependent DNA polymerase, reverse transcriptase, transferase, replication; 3.00A {Moloney murine leukemia virus} SCOP: e.8.1.2
Probab=42.26 E-value=13 Score=37.40 Aligned_cols=43 Identities=12% Similarity=-0.066 Sum_probs=34.2
Q ss_pred CCCcchHHHHHHHHHHHHHhHhc-CCceEEEEeccHHHHHhhccc
Q psy14885 250 HEASIFTAEAIAIFYCIKKISDM-KIKKAIIFSDNKSVLNGIDNI 293 (483)
Q Consensus 250 ~~~s~~~AEl~ai~~Al~~~~~~-~~~~~~I~tDs~~~~~~l~~~ 293 (483)
...++++.|+.||..|++..... ...+++|+||+. ++..+.++
T Consensus 385 ~~ys~~ekEllAi~~a~~~~~~yl~g~~~~v~tDh~-~~~~l~~~ 428 (455)
T 1rw3_A 385 AGWPPCLRMVAAIAVLTKDAGKLTMGQPLVIKAPHA-VEALVKQP 428 (455)
T ss_dssp SSSCCSSHHHHHHHHHHHHHHGGGCSSCEEEECSSC-TTTTSSST
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCCcEEEEecCh-HHHHhCCC
Confidence 45678999999999999988543 567899999997 66666654
No 101
>2fr5_A Cytidine deaminase; tetrahydrouridine, protein-inhibitor COM alternate conformation of Arg68, hydrolase; HET: TYU; 1.48A {Mus musculus} SCOP: c.97.1.1 PDB: 1zab_A* 2fr6_A* 1mq0_A*
Probab=36.19 E-value=47 Score=27.73 Aligned_cols=54 Identities=19% Similarity=0.060 Sum_probs=35.8
Q ss_pred CCCceEEEEEeCCCEEEeCC----CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccH
Q psy14885 230 NSNTGFAFIINNENFQYRLP----HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNK 284 (483)
Q Consensus 230 ~~~~G~g~~~~~~~~~~~l~----~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~ 284 (483)
+.++|++++..++.+-.... .......||..||..|... -......+.|++|..
T Consensus 35 ~f~VGAal~~~dG~i~~G~NvEnas~~~t~cAE~~Ai~~A~~~-G~~~l~~i~v~~~~~ 92 (146)
T 2fr5_A 35 RFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISE-GYKDFRAIAISSDLQ 92 (146)
T ss_dssp CCCEEEEEEETTSCEEEEECBCCSSGGGCBCHHHHHHHHHHHT-TCCCEEEEEEEESCS
T ss_pred CCCEEEEEEeCCCcEEEEEeccccCCCCCcCHHHHHHHHHHhC-CCCceEEEEEEeCCC
Confidence 46788888776655433332 2223467999999999875 333567788998853
No 102
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.44 E-value=1.3e+02 Score=22.01 Aligned_cols=64 Identities=16% Similarity=0.230 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhhCCCceEEEEeccCCCCcchHHHhHHHHhhhcCCCCCccchHHHHHHHHHHHH
Q psy14885 300 IQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIV 364 (483)
Q Consensus 300 ~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gNe~AD~lAk~a~~~~~~~~~~~~~~k~~~k~~~~ 364 (483)
.+.|.+.+..++..|..+ +.+|.|-+...-||.-.++-|++.+-.......+.++.+.+++-++
T Consensus 37 sqdirdiiksmkdngkpl-vvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 37 SQDIRDIIKSMKDNGKPL-VVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp HHHHHHHHHHHTTCCSCE-EEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcCCeE-EEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 356666666776666555 5679999988899998888888876654433344555555555443
No 103
>2zd1_B P51 RT; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} SCOP: e.8.1.2 PDB: 2ykm_B* 2ykn_B* 2ze2_B* 3bgr_B* 3ig1_B* 3irx_B* 3is9_B* 3qo9_B* 3v4i_B* 3v6d_B* 3v81_B* 3klf_B* 3kk1_B* 3kjv_B* 3kk2_B* 3kk3_B* 2be2_B* 1n5y_B* 1bqm_B* 1n6q_B* ...
Probab=27.39 E-value=99 Score=30.62 Aligned_cols=67 Identities=10% Similarity=-0.003 Sum_probs=40.4
Q ss_pred cCCcceEeeCCCCCCCceEEEEEeCCC-E-----EEeCCCCCcchHHHHHH-HHHHHHHhHh----cCCceEEEEeccHH
Q psy14885 217 KQPTDVVFDLSKRNSNTGFAFIINNEN-F-----QYRLPHEASIFTAEAIA-IFYCIKKISD----MKIKKAIIFSDNKS 285 (483)
Q Consensus 217 ~~p~~~~~DgS~~~~~~G~g~~~~~~~-~-----~~~l~~~~s~~~AEl~a-i~~Al~~~~~----~~~~~~~I~tDs~~ 285 (483)
..|..+..|+|..+ .+|.++.++. . .+.-......++-|++| |+.||+.-.. .....++++||.+.
T Consensus 322 ~~~~~l~~das~~g---~~g~vl~q~~~~~~~s~~~~~~~~y~~~~~e~la~vv~al~~~r~yl~G~~~~~~i~~td~~~ 398 (428)
T 2zd1_B 322 SKDLIAEIQKQGQG---QWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETW 398 (428)
T ss_dssp TSCCEEEEEEEETT---EEEEEEESSTTCEEEEEEEECCSSCTTCHHHHHHHHHHHHHHHHHHHHSSCCEEEESSCHHHH
T ss_pred CCCEEEEEecCCCC---cEEEEEecCCCceeeecccchhhhcccchHHHHHHHHHHhhccceEEECCCCcEECCccHHHH
Confidence 34444444988532 4455555432 2 22223455567778877 9999987532 24466788999875
Q ss_pred H
Q psy14885 286 V 286 (483)
Q Consensus 286 ~ 286 (483)
.
T Consensus 399 ~ 399 (428)
T 2zd1_B 399 E 399 (428)
T ss_dssp H
T ss_pred H
Confidence 3
No 104
>1uwz_A Cytidine deaminase; CDD, tetramer, zinc binding, pyrimidine metabolism, salvage, hydrolase; HET: THU; 1.99A {Bacillus subtilis} SCOP: c.97.1.1 PDB: 1ux0_A* 1jtk_A* 1ux1_A*
Probab=26.99 E-value=83 Score=25.77 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCceEEEEEeCCCEEEeCC----CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccH
Q psy14885 231 SNTGFAFIINNENFQYRLP----HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNK 284 (483)
Q Consensus 231 ~~~G~g~~~~~~~~~~~l~----~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~ 284 (483)
-++|++++..++.+-.... .......||..||..|... -......+.|++|..
T Consensus 24 ~~VGAal~~~dG~i~~G~Nvena~~~~t~cAE~~Ai~~A~~~-G~~~~~~~~l~~~~~ 80 (136)
T 1uwz_A 24 FQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSE-GDTEFQMLAVAADTP 80 (136)
T ss_dssp CCEEEEEEETTSCEEEEECBCCSSGGGCBCHHHHHHHHHHHH-TCCCEEEEEEEESCS
T ss_pred CCEEEEEEeCCCeEEEEeCcccCCCCCccCHHHHHHHHHHHC-CCCCeEEEEEEeCCC
Confidence 4677777665554432222 2223477999999999876 334567788888753
No 105
>2z3g_A Blasticidin-S deaminase; hydrolase, cytidine deaminase family, zinc, tetramer; HET: TRE; 1.50A {Aspergillus terreus} SCOP: c.97.1.1 PDB: 1wn6_A* 1wn5_A* 2z3h_A* 2z3j_A 2z3i_A*
Probab=23.06 E-value=1.1e+02 Score=24.90 Aligned_cols=52 Identities=8% Similarity=-0.025 Sum_probs=33.4
Q ss_pred CCceEEEEEeCCCEEEeC--CCCCcchHHHHHHHHHHHHHhHhcCCceEEEEecc
Q psy14885 231 SNTGFAFIINNENFQYRL--PHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDN 283 (483)
Q Consensus 231 ~~~G~g~~~~~~~~~~~l--~~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs 283 (483)
-++|++++..++.+-... ........||..||..|... -....+.+.|++|.
T Consensus 27 f~VGAal~~~dG~i~~G~NvE~~~~t~cAE~~Ai~~A~~~-G~~~~~~i~vv~~~ 80 (130)
T 2z3g_A 27 YSVASAALSSDGRIFTGVNVYHFTGGPCAELVVLGTAAAA-AAGNLTCIVAIGNE 80 (130)
T ss_dssp SCEEEEEEETTSCEEEEECCCCTTTCCCHHHHHHHHHHHT-TCCCEEEEEEEETT
T ss_pred CCEEEEEEecCCeEEEEeccccCCcccCHHHHHHHHHHHc-CCCceEEEEEEECC
Confidence 567888776665443222 12333577999999999874 22345677888874
No 106
>1wkq_A Guanine deaminase; domain SWAP, the cytidine deaminase superfamily, substrate specificity, structural plasticity, hydrolase; 1.17A {Bacillus subtilis} SCOP: c.97.1.2 PDB: 1tiy_A
Probab=22.02 E-value=64 Score=27.45 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=30.1
Q ss_pred CCCceEEEEEeCCCEE-EeCCC----CCcchHHHHHHHHHHHHHhHhcCCceEEEEe
Q psy14885 230 NSNTGFAFIINNENFQ-YRLPH----EASIFTAEAIAIFYCIKKISDMKIKKAIIFS 281 (483)
Q Consensus 230 ~~~~G~g~~~~~~~~~-~~l~~----~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~t 281 (483)
+.++|+.+| .++.+. ..... ....-.||..||..|.+.+........++|+
T Consensus 31 ~~pVGAVIV-~~g~Ii~~G~N~~~~~~d~~~HAE~~AI~~a~~~~~~~~l~g~tlYv 86 (164)
T 1wkq_A 31 GGPFGAVIV-KDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYT 86 (164)
T ss_dssp SSSCEEEEE-ETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSSCTTEEEEE
T ss_pred CCCEEEEEE-ECCEEEEEEecCCcCCCCcccCHHHHHHHHHHHHcCCCCcCceEEEE
Confidence 467888766 443322 22221 1124679999999998865433445566666
No 107
>2nx8_A TRNA-specific adenosine deaminase; TAD, hydrolase; 2.00A {Streptococcus pyogenes serotype M6}
Probab=21.39 E-value=62 Score=27.97 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=29.7
Q ss_pred CCCceEEEEEeCCCEE-EeCCC----CCcchHHHHHHHHHHHHHhHhcCCceEEEEec
Q psy14885 230 NSNTGFAFIINNENFQ-YRLPH----EASIFTAEAIAIFYCIKKISDMKIKKAIIFSD 282 (483)
Q Consensus 230 ~~~~G~g~~~~~~~~~-~~l~~----~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tD 282 (483)
+.++|+.+|- ++.+. ..... ......||..||..|.+..........++|+-
T Consensus 35 ~~pVGAVIV~-~g~Ii~~G~N~~~~~~d~t~HAE~~AI~~a~~~~~~~~l~g~tlYvT 91 (179)
T 2nx8_A 35 EIPIGCVIVK-DGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVT 91 (179)
T ss_dssp SCCCEEEEEE-TTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE
T ss_pred CCCEEEEEEE-CCEEEEEEECCCCCcCCCccCHHHHHHHHHHHHcCCCcccceEEEEC
Confidence 3577777663 33221 22221 11246799999999988754334455666653
No 108
>2d30_A Cytidine deaminase; purines, pyrimidines, nucleosides, nucleotides, salvage of nucleosides and nucleotides, structural genomics; 2.40A {Bacillus anthracis} SCOP: c.97.1.1
Probab=20.50 E-value=1.1e+02 Score=25.22 Aligned_cols=53 Identities=19% Similarity=0.168 Sum_probs=34.7
Q ss_pred CCceEEEEEeCCCEEEeCC----CCCcchHHHHHHHHHHHHHhHhcCCceEEEEeccH
Q psy14885 231 SNTGFAFIINNENFQYRLP----HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNK 284 (483)
Q Consensus 231 ~~~G~g~~~~~~~~~~~l~----~~~s~~~AEl~ai~~Al~~~~~~~~~~~~I~tDs~ 284 (483)
-++|++++..++.+-.... ......-||..||..|...- ......|.|.+|..
T Consensus 33 f~VGAAll~~dG~i~~G~NvEnasy~~t~CAEr~Ai~~Avs~G-~~~~~aiav~~~~~ 89 (141)
T 2d30_A 33 FQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAVSEG-DKEFVAIAIVADTK 89 (141)
T ss_dssp CCEEEEEEETTCCEEEEECBCCSSGGGCBCHHHHHHHHHHHTT-CCCEEEEEEEESCS
T ss_pred CcEEEEEEeCCCCEEEeeccccCCCCcccCHHHHHHHHHHHCC-CCceEEEEEEeCCC
Confidence 4678887776665433332 22235679999999998752 23467788888864
No 109
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=20.20 E-value=93 Score=32.21 Aligned_cols=80 Identities=10% Similarity=0.029 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhHhcCCceEEEE--eccHH----HHHhhcccCCcchHHHHHHHHHHHHhhCCCceEEEEeccCCCCcch
Q psy14885 258 EAIAIFYCIKKISDMKIKKAIIF--SDNKS----VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALN 331 (483)
Q Consensus 258 El~ai~~Al~~~~~~~~~~~~I~--tDs~~----~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~WvpgH~g~~gN 331 (483)
-+.+|+..|..+.+.+...|.+. .++.+ -+.-...+.+.-......++.+..++++|..|-+-||+.|++....
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 253 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFA 253 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccch
Confidence 47888888999998888877654 22211 0000000000001246777888888999999999999999997665
Q ss_pred HHHhHH
Q psy14885 332 DKADQL 337 (483)
Q Consensus 332 e~AD~l 337 (483)
...|.+
T Consensus 254 ~f~~~~ 259 (588)
T 1j0h_A 254 PFQDVW 259 (588)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 444444
Done!