RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14885
(483 letters)
>d1xpha1 d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related receptor)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 54.3 bits (129), Expect = 1e-09
Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
CP+ W ++ +CY S + +D+ C+ + + L + A+E F+ Q +
Sbjct: 3 HCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 61
Query: 88 RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
Q+ WV+ + + + PN NED
Sbjct: 62 SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGE-PNNSGNED 103
>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 53.7 bits (128), Expect = 1e-09
Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C + WV Y+ CY ++ A+ C + LA ++ + F+ ++
Sbjct: 3 CSEDWVGYQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE--- 58
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGG 118
+ G ++ + W + + W+
Sbjct: 59 --HWVGLKKEPGHPWKWSNGKEFNNWFNVT 86
>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 131
Score = 53.4 bits (127), Expect = 2e-09
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 3/102 (2%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CPQ W+ + ++CY F ++ C SLD+ L +N + FI + +
Sbjct: 5 CPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPF 63
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
P LW + + G + +
Sbjct: 64 WMGLSRRNPSYPWLWEDGSPLMPHLFRVRG--AVSQTYPSGT 103
>d1qo3c_ d.169.1.1 (C:) NK cell receptor {Mouse (Mus musculus),
ly49-a [TaxId: 10090]}
Length = 133
Score = 51.8 bits (123), Expect = 7e-09
Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
+W Y CY FV KT + K C+S L ++D DE F+ +
Sbjct: 14 DKVYWFCYGMKCYYFVMDR-KTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVVPSDSC-- 70
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
W W D+ + +
Sbjct: 71 --WVGLSYDNKKKDWAWIDNRPSKLALNTRKYNIRD 104
>d3c8ja1 d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus
musculus), ly49-c [TaxId: 10090]}
Length = 122
Score = 51.0 bits (121), Expect = 1e-08
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%)
Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
R ++W Y CY F+ + T + K NC+ + + D DE F+ + +
Sbjct: 1 RGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGNY- 58
Query: 88 RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
W + W D+ + +
Sbjct: 59 ---WIGLSYDKKKKEWAWIDNGPSKLDMKIKKMNFKS 92
>d1uv0a_ d.169.1.1 (A:) Pancreatitis-associated protein 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 140
Score = 50.9 bits (120), Expect = 2e-08
Identities = 21/157 (13%), Positives = 40/157 (25%), Gaps = 20/157 (12%)
Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
+RCP+ Y CY SP + K +L +V E F+ +
Sbjct: 3 IRCPKGSKAYGSHCYALFLSPKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGN 62
Query: 87 QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPA 146
+ G + + + + W
Sbjct: 63 SYSYVWIGLH----DPTQGTEPNGEGWEWSSSDVMNYFAWERN--------------PST 104
Query: 147 DNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183
+ + S S + RW L ++C+ +
Sbjct: 105 ISSPGHCASLSRSTAFLRWKDYNCN--VRLPYVCKFT 139
>d1tdqb_ d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 126
Score = 48.9 bits (115), Expect = 8e-08
Identities = 21/153 (13%), Positives = 38/153 (24%), Gaps = 31/153 (20%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C + W +++ CYR +T DA+ C+ S L+++ +E F+
Sbjct: 3 CEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQDYQ--- 58
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
W + + DG +L
Sbjct: 59 -------------------------WIGLNDRTIEGDFRWSDGHSLQFEKWRPNQPDNFF 93
Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181
+ W L F C+
Sbjct: 94 ATGEDCVVMIWHERGEWNDVPCN--YQLPFTCK 124
>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 123
Score = 48.8 bits (115), Expect = 8e-08
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 5/103 (4%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP +W+ +R++CY+F KT N ++ +C S +S L + +E F+ +
Sbjct: 6 CPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYH---- 60
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDG 131
W + + +
Sbjct: 61 WMGLVQIPANGSWQWEDGSSLSYNQLTLVEIPKGSCAVYGSSF 103
>d1t8da1 d.169.1.1 (A:1-143) Low affinity immunoglobulin epsilon Fc
receptor {Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 46.5 bits (109), Expect = 6e-07
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 6/102 (5%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP+ W+ ++ CY F K K A+ C ++ L +++ +E F+
Sbjct: 8 CPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWI 66
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ +WV D + + + ED
Sbjct: 67 --GLRNLDLKGEFIWV---DGSHVDYSNWAPGEPTSRSQGED 103
>d1dv8a_ d.169.1.1 (A:) H1 subunit of the asialoglycoprotein
receptor {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 46.3 bits (108), Expect = 7e-07
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP +WV++ SCY F +S K DA C+ D+ L V +E F+ + + +
Sbjct: 1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWM 59
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLN 135
G + + E + + L ED +
Sbjct: 60 GLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFT 106
>d1mu2a1 c.55.3.1 (A:430-555) HIV RNase H (Domain of reverse
transcriptase) {Human immunodeficiency virus type 2
[TaxId: 11709]}
Length = 126
Score = 44.5 bits (104), Expect = 2e-06
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 7/117 (5%)
Query: 227 SKRNSNTGFA-FIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKS 285
R S G A ++ + + + + + AE A + I D++
Sbjct: 16 CNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTDSGPKVN----IIVDSQY 71
Query: 286 VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSI 342
V+ + Q I + I W+P+H I N + D L I
Sbjct: 72 VMGIVA--SQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI 126
>d1kg0c_ d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId: 10376]}
Length = 136
Score = 44.4 bits (104), Expect = 3e-06
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 6/95 (6%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSD-LANVNDADEHGFIMYQLFWQDPQ 87
++ Y+ C+ F K T N C D + L +
Sbjct: 19 TREYTFSYKGCCFYFTKKK-HTWNGCFQACAEKYPCTYFYGPTPDILPVVTRNLNAIES- 76
Query: 88 RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQS 122
+ G + W + D + + G+ +
Sbjct: 77 ---LWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCT 108
>d3bdwa1 d.169.1.1 (A:59-179) CD94 {Human (Homo sapiens) [TaxId:
9606]}
Length = 121
Score = 43.5 bits (101), Expect = 5e-06
Identities = 19/106 (17%), Positives = 31/106 (29%), Gaps = 5/106 (4%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQ----LFWQ 84
C + WV YR +CY KT N+++ C S S L + + DE F+
Sbjct: 3 CQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGL 61
Query: 85 DPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ S + ++E
Sbjct: 62 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDES 107
>d1gz2a_ d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 139
Score = 43.7 bits (101), Expect = 6e-06
Identities = 22/155 (14%), Positives = 36/155 (23%), Gaps = 18/155 (11%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C WV C F + + A+ C G + +
Sbjct: 2 CGPGWVPTPGGCLGFFSRE-LSWSRAESFC-------------RRWGPGSHLAAVRSAAE 47
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
+ S + + R W W DGT +
Sbjct: 48 LRLLAELLNASRGGDGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFAS--WHRTAKAR 105
Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 183
A ++ W T E F+C+A+
Sbjct: 106 RGGRCAALRDEEAFTSWAARPCT--ERNAFVCKAA 138
>d1egga_ d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 43.3 bits (100), Expect = 9e-06
Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 29 CPQHWV--QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFW 83
CP+ W C++ KT +++ C++L DLA++N+ +E I +
Sbjct: 1 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITA 60
Query: 84 QDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ ++ G T SP+ D + + N E
Sbjct: 61 SGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWAYGEPNNYQNVEY 107
>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western
diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]}
Length = 135
Score = 42.9 bits (99), Expect = 1e-05
Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 3/104 (2%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDP 86
CP W+ CY+ KT DA++ C+ + E I +
Sbjct: 3 CPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHK 61
Query: 87 QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ + G + + D + Q + E
Sbjct: 62 GQENVWIGLRDKKKDFSWEWTDRSCTDYLTWDKNQPDHYQNKEF 105
>d1c3ab_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake
(Trimeresurus flavoviridis), flavocetin-A [TaxId:
88087]}
Length = 125
Score = 42.4 bits (98), Expect = 1e-05
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W Y + CY+ + DA+ C V+ +
Sbjct: 4 CPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILK 62
Query: 89 RKWYFGGTQQSPNLW 103
+ + G N
Sbjct: 63 YDFVWIGLSNVWNEC 77
>d1wmza_ d.169.1.1 (A:) Lectin CEL-I {Cucumaria echinata [TaxId:
40245]}
Length = 140
Score = 42.2 bits (97), Expect = 2e-05
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 8/109 (7%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-------DSDLANVNDADEHGFIMYQL 81
CP W D CYRF + T +A C S SDL +V+ A E ++
Sbjct: 3 CPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYW 61
Query: 82 FWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
D Q + + G + D + + Q N ED
Sbjct: 62 RGIDSQAGQLWIGLYDKYNEGDFIWTDGSKVGYTKWAGGQPDNWNNAED 110
>d1rila_ c.55.3.1 (A:) RNase H (RNase HI) {Thermus thermophilus
[TaxId: 274]}
Length = 147
Score = 42.2 bits (98), Expect = 2e-05
Identities = 14/125 (11%), Positives = 43/125 (34%), Gaps = 13/125 (10%)
Query: 234 GFAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAI-IFSDNKSVLNGIDN 292
G+A ++ + L + T + + I+ + +K + +++D+ +
Sbjct: 20 GWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALKEPCEVDLYTDSHYLKKAFTE 79
Query: 293 I------------QQRNNIIQLIKQEYYFASTNGSQISFMWIPSHSNIALNDKADQLAKN 340
+ + E + ++ F ++ H+ N++ D+ A+
Sbjct: 80 GWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARR 139
Query: 341 SINSK 345
S+
Sbjct: 140 QAQSQ 144
>d1jwia_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Puff adder
(Bitis arietans), bitiscetin [TaxId: 8692]}
Length = 124
Score = 41.6 bits (96), Expect = 2e-05
Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 7/98 (7%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C W Y+ CY+ K T DA+ C LA+++ +E F+ +
Sbjct: 1 CLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKF 59
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLW 126
+ L Q + G+
Sbjct: 60 VYDAWI------GLRDESKTQQCSPQWTDGSSVVYENV 91
>d1oz7a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw-scaled
viper (Echis carinatus), echicetin [TaxId: 40353]}
Length = 131
Score = 41.6 bits (96), Expect = 3e-05
Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 6/103 (5%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W CY K P KT ++A+ C D ++ + I+ + +
Sbjct: 2 CPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIG 60
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDG 131
+ + L + + G+
Sbjct: 61 KMYKIWT-----GLSERSKEQHCSSRWSDGSFFRSYEIAIRYS 98
>d1umrc_ d.169.1.1 (C:) Snake coagglutinin beta chain {South
american rattlesnake (Crotalus durissus terrificus),
convulxin [TaxId: 8732]}
Length = 125
Score = 41.3 bits (95), Expect = 3e-05
Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 9/98 (9%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP HW Y CY+ K T DA+ C + V+ +
Sbjct: 4 CPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLK 62
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLW 126
+++ N + + GT+ W
Sbjct: 63 STFFWI--------GANNIWNKCNWQWSDGTKPEYKEW 92
>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan
pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:
8717]}
Length = 127
Score = 41.2 bits (95), Expect = 3e-05
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQD 85
RCP W + CY+ K KT +A+ C + + L ++ A E F+ +
Sbjct: 2 RCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNF 60
Query: 86 PQRRKWYFGG--------TQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
++R + G T + + N +P RK + + + W D
Sbjct: 61 DKQRYRAWTGLTERNLKWTNGASVSYENLYEPYIRKCFVVQPWEGKSKWYKAD 113
>d1jwib_ d.169.1.1 (B:) Snake coagglutinin beta chain {Puff adder
(Bitis arietans), bitiscetin [TaxId: 8692]}
Length = 123
Score = 40.8 bits (94), Expect = 5e-05
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 9/102 (8%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C W Y+ CY+ K KT DA+ CK L + ++ + R
Sbjct: 2 CLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMR 60
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ G + + G + +E
Sbjct: 61 IVLVWIGLSHFWRIC--------PLRWTDGARLDYRALSDEP 94
>d2afpa_ d.169.1.1 (A:) Type II antifreeze protein {Sea raven
(Hemitripterus americanus) [TaxId: 8094]}
Length = 129
Score = 40.9 bits (94), Expect = 5e-05
Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 8/103 (7%)
Query: 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQ 87
CP W D C + + T A+ NC L LA+++ +EH +
Sbjct: 6 NCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEH-------SFIQTL 57
Query: 88 RRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ G + P+ +
Sbjct: 58 NAGVVWIGGSACLQAGAWTWSDGTPMNFRSWCSTKPDDVLAAC 100
>d1oz7b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Saw-scaled
viper (Echis carinatus), echicetin [TaxId: 40353]}
Length = 123
Score = 40.4 bits (93), Expect = 6e-05
Identities = 16/101 (15%), Positives = 25/101 (24%), Gaps = 9/101 (8%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
C W Y CY+ K DA+ C D V+ + +
Sbjct: 2 CLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK 60
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNE 129
+ + + + G Q W NE
Sbjct: 61 NDLVWI--------GLTDYWRDCNWEWSDGAQLDYKAWDNE 93
>d1g1ta1 d.169.1.1 (A:1-118) E-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 40.1 bits (92), Expect = 7e-05
Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 3/91 (3%)
Query: 40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
Y T ++A C+ + L + + +E + W +
Sbjct: 2 SYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEY--LNSILSYSPSYYWIGIRKVNN 58
Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+WV P + + N +ED
Sbjct: 59 VWVWVGTQKPLTEEAKNWAPGEPNNRQKDED 89
>d1jl1a_ c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli [TaxId:
562]}
Length = 152
Score = 40.4 bits (93), Expect = 1e-04
Identities = 13/102 (12%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 250 HEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKSVLNGIDNIQQRNN---IIQLIKQE 306
+ A+ ++ + + + + N + + + + +
Sbjct: 44 RMELMAAIVALEALKEHAEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQ 103
Query: 307 YYFASTNGSQISFMWIPSHSNIALNDKADQLAKNSINSKLLD 348
A+ QI + W+ H+ N++AD+LA+ + + L+
Sbjct: 104 RLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNPTLE 145
>d1v7pa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Snake (Echis
multisquamatus), Ems16 [TaxId: 93050]}
Length = 134
Score = 39.7 bits (91), Expect = 1e-04
Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAK--LNCKSLDSDLANVNDADEHGFIMYQLFW 83
+ CP W Y CY + P + +A+ ++ D L ++ +E F+ +
Sbjct: 1 DFDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSG 59
Query: 84 QDPQRRKWYFGG---TQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNE 136
+ + + G ++ +D + + +S TN ++
Sbjct: 60 FMHRSEIYVWIGLRDRREEQQCNPEWNDGSKIIYVNWKEGESKMCQGLTKWTNFHD 115
>d1qdda_ d.169.1.1 (A:) Lithostathine, inhibitor of stone formation
{Human (Homo sapiens) [TaxId: 9606]}
Length = 144
Score = 40.1 bits (92), Expect = 1e-04
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 25/155 (16%)
Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
+ CP+ YR CY F + +T DA L C++ + + +
Sbjct: 12 ISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQN----------MNSGNLVSVLTQAEGA 60
Query: 87 QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPA 146
N+W+ DP++ + W G+ + + P+
Sbjct: 61 FVASLIKESGTDDFNVWIGLHDPKKNRA-----------WHWSSGSL-VSYKSWGIGAPS 108
Query: 147 DNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICE 181
++ + S ++W + F+C+
Sbjct: 109 SVNPGYCVSLTSSTGFQKWKDVPCE--DKFSFVCK 141
>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis
multisquamatus), Ems16 [TaxId: 93050]}
Length = 127
Score = 39.3 bits (90), Expect = 2e-04
Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 3/82 (3%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W + CY+ + K +A+ C + +
Sbjct: 1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALK 59
Query: 89 RKWYFGGT--QQSPNLWVNEDD 108
+ G W D+
Sbjct: 60 FTSMWIGLNNPWKDCKWEWSDN 81
>d1j34b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake
(Trimeresurus flavoviridis) [TaxId: 88087]}
Length = 123
Score = 38.5 bits (88), Expect = 3e-04
Identities = 14/75 (18%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W Y CY+ P K DA+ C + V+
Sbjct: 2 CPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG 60
Query: 89 RKWYFGGTQQSPNLW 103
++ G N
Sbjct: 61 HSIFWMGLSNVWNQC 75
>d1pwba1 d.169.1.1 (A:235-355) Surfactant protein, lectin domain
{Human (Homo sapiens), SP-D [TaxId: 9606]}
Length = 121
Score = 38.5 bits (88), Expect = 3e-04
Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Query: 32 HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKW 91
+ + ++ K +A+L C LA+ A E+ + + ++
Sbjct: 2 NGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLS 60
Query: 92 YFGGTQQSPNLWVNEDDPQRRKWYFG 117
+ + + W G
Sbjct: 61 MTDSKTEGKFTYPTGESLVYSNWAPG 86
>d1wk1a_ d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 150
Score = 38.8 bits (89), Expect = 4e-04
Identities = 20/142 (14%), Positives = 40/142 (28%), Gaps = 23/142 (16%)
Query: 40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
L + A+ C S LA+ D++ F ++ G + S
Sbjct: 10 FLTVNDDIL-SMPQARNFCASAGGYLADDLGDDKNNFYSSIAANTQ-----FWIGLFKNS 63
Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFS 159
+ + + + +G EP+++ R + +
Sbjct: 64 DGQFYWDRG-----QGINPDLLNQPITYWANG------------EPSNDPTRQCVYFDGR 106
Query: 160 QSLKRWGFERVTGMEPLLFICE 181
K + T P FIC+
Sbjct: 107 SGDKSKVWTTDTCATPRPFICQ 128
>d1umra_ d.169.1.1 (A:) Snake coagglutinin alpha chain {South
american rattlesnake (Crotalus durissus terrificus),
convulxin [TaxId: 8732]}
Length = 135
Score = 37.8 bits (86), Expect = 5e-04
Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 5/107 (4%)
Query: 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP 86
L CP W Y CYR DA+ C V+ F
Sbjct: 2 LHCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAK----EADFVAWM 56
Query: 87 QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTN 133
+ + S L V + Q + G+ S + ++ T
Sbjct: 57 VTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITK 103
>d1fvua_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Jararaca
(Bothrops jararaca), botrocetin [TaxId: 8724]}
Length = 133
Score = 37.8 bits (86), Expect = 7e-04
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDP 86
CP W Y +CY+F + DA+ C + L ++ + + L ++
Sbjct: 2 CPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNI 60
Query: 87 QRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPN 124
Q Y + N
Sbjct: 61 QSSDLYAWIGLRVENKEKQCSSEWSDGSSVSYENVVER 98
>d1j34a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake
(Trimeresurus flavoviridis) [TaxId: 88087]}
Length = 129
Score = 37.1 bits (84), Expect = 0.001
Identities = 26/154 (16%), Positives = 40/154 (25%), Gaps = 26/154 (16%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W Y CY+ K KT +DA+ C V+ F
Sbjct: 2 CPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAG----EADFVAQLVT 56
Query: 89 RKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADN 148
+ L V + Q + G+ S W +
Sbjct: 57 ENIQNTKSYVWIGLRVQGKEKQCSSEWSDGSSVSYENW-------------------IEA 97
Query: 149 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 182
+ L ++W + F+CEA
Sbjct: 98 ESKTCLGLEKETGFRKWVNIYCG--QQNPFVCEA 129
>d1g1sa1 d.169.1.1 (A:1-118) P-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 36.2 bits (82), Expect = 0.001
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 3/91 (3%)
Query: 40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
Y + + N ++ C++ +DL + + +E ++ L + W
Sbjct: 2 TYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYYSSYY--WIGIRKNNK 58
Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
WV + + N NED
Sbjct: 59 TWTWVGTKKALTNEAENWADNEPNNKRNNED 89
>d1sb2a1 d.169.1.1 (A:1-132) Snake coagglutinin alpha chain {Malayan
pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:
8717]}
Length = 132
Score = 36.3 bits (82), Expect = 0.002
Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 17/118 (14%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFI--------- 77
CP W + CYR K KT +A+ C ++ L ++ + E F+
Sbjct: 2 CPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFE 60
Query: 78 -----MYQLFWQDPQRRKWYFGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
+ + + ++ + S + N +P K + Q W D
Sbjct: 61 NKIYRSWIGLKIENKGQRSNLEWSDGSSISYENLYEPYMEKCFLMDHQSGLPKWHTAD 118
>d1s1ta1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse
transcriptase) {Human immunodeficiency virus type 1
[TaxId: 11676]}
Length = 110
Score = 35.7 bits (82), Expect = 0.002
Identities = 14/100 (14%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 227 SKRNSNTG-FAFIINNENFQYRLPHEASIFTAEAIAIFYCIKKISDMKIKKAIIFSDNKS 285
+ R + G ++ N + + + E AI+ ++ + I +D++
Sbjct: 17 ANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQD----SGLEVNIVTDSQY 72
Query: 286 VLNGIDNIQQRNNIIQLIKQEYYFASTNGSQISFMWIPSH 325
L I Q + + + ++ W+P+H
Sbjct: 73 ALGIIQ--AQPDQSESELVNQIIEQLIKKEKVYLAWVPAH 110
>d1c3aa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake
(Trimeresurus flavoviridis), flavocetin-A [TaxId:
88087]}
Length = 135
Score = 35.9 bits (81), Expect = 0.003
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP 86
C W Y CY+ P K DA+ C+ S L ++ + E F+ + +
Sbjct: 4 CIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIK 62
Query: 87 QRRKWYFGGTQQSPNLW 103
++ + G +
Sbjct: 63 TSFQYVWIGLRIQNKEQ 79
>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 35.5 bits (80), Expect = 0.004
Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Query: 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQ 84
L+ C + + C+ KT ++A +C S L+ E+ + L
Sbjct: 2 LQTVCLKGT-KVHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQS 59
Query: 85 DPQRRKWYFGGTQQSPNLWVNEDDPQRRK--WYFGGTQQSPNLWVNED 130
+ + G + + R + P+ E+
Sbjct: 60 VGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTEN 107
>d1r13a1 d.169.1.1 (A:110-228) Surfactant protein, lectin domain
{Rat (Rattus norvegicus), SP-A [TaxId: 10116]}
Length = 119
Score = 35.0 bits (79), Expect = 0.004
Identities = 11/98 (11%), Positives = 24/98 (24%), Gaps = 5/98 (5%)
Query: 33 WVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWY 92
+ D + + K C ++A +E+ I + +
Sbjct: 2 MLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIAS--IAKKYNNYVYL 58
Query: 93 FGGTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
Q+P + D + + P E
Sbjct: 59 GMIEDQTPGDFHYLDGASVSYTNWYPGE--PRGQGKEK 94
>d1fvub_ d.169.1.1 (B:) Snake coagglutinin beta chain {Jararaca
(Bothrops jararaca), botrocetin [TaxId: 8724]}
Length = 125
Score = 34.4 bits (77), Expect = 0.007
Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 5/109 (4%)
Query: 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
CP W Y CYRF K +DA+ C + V+ + + + +
Sbjct: 2 CPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLK 60
Query: 89 RKWYFGG----TQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNEDGTN 133
+ G + W + + +Y + +
Sbjct: 61 GDVVWIGLSDVWNKCRFEWTDGMEFDYDDYYLIAEYECVASKPTNNKWW 109
>d1hupa1 d.169.1.1 (A:112-228) Mannose-binding protein A, C-lectin
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 34.3 bits (77), Expect = 0.008
Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 35 QYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFG 94
Q + + T K C + +A +A Q+ + + + G
Sbjct: 2 QVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAA------ENGAIQNLIKEEAFLG 54
Query: 95 GTQQSPNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
T + + R + + N +ED
Sbjct: 55 ITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDED 90
>d2msba_ d.169.1.1 (A:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 32.6 bits (73), Expect = 0.024
Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 7/91 (7%)
Query: 40 CYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS 99
+ + K C L +A +A+E+ I + G T +
Sbjct: 3 FFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAKTS------AFLGITDEV 55
Query: 100 PNLWVNEDDPQRRKWYFGGTQQSPNLWVNED 130
R + + + ED
Sbjct: 56 TEGQFMYVTGGRLTYSNWKKDEPNDHGSGED 86
>d1h8ua_ d.169.1.1 (A:) Eosinophil major basic protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 115
Score = 32.2 bits (72), Expect = 0.041
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 5/81 (6%)
Query: 41 YRFVKSPLKTRNDAKLNCKSLD-SDLANVNDADEHGFIMYQLFWQDPQRRKWYF---GGT 96
Y V+S +T + A C+ +L ++++ + + I + + + G
Sbjct: 2 YLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSG 60
Query: 97 QQSPNLWVNEDDPQRRKWYFG 117
+ WV+ W
Sbjct: 61 RCRRFQWVDGSRWNFAYWAAH 81
>d1byfa_ d.169.1.1 (A:) Lectin TC14 {Tunicate (Polyandrocarpa
misakiensis) [TaxId: 7723]}
Length = 123
Score = 31.0 bits (68), Expect = 0.13
Identities = 12/79 (15%), Positives = 16/79 (20%), Gaps = 1/79 (1%)
Query: 38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQ 97
D F DA C+S L + D F + W
Sbjct: 1 DYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEVKGHDYWVGADNL 59
Query: 98 QSPNLWVNEDDPQRRKWYF 116
Q +D
Sbjct: 60 QDGAYNFLWNDGVSLPTDS 78
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a
cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Length = 261
Score = 30.2 bits (67), Expect = 0.45
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 217 KQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFY 264
KQ + ++ + ++S T A II NE F + + +
Sbjct: 22 KQKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLL 69
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS)
{Thermus thermophilus [TaxId: 274]}
Length = 324
Score = 29.2 bits (64), Expect = 1.1
Identities = 15/243 (6%), Positives = 58/243 (23%), Gaps = 5/243 (2%)
Query: 145 PADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIE 204
+ + + + L+ G + + P+ + + + + R +
Sbjct: 13 GKELRMHQRIVATARKVLEAAGALEL--VTPIFEETQVFEKGVGAATDIVRKEMFTFQDR 70
Query: 205 NPDKIPRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQYRLPHEASIFTAEAIAIFY 264
+ P + + + F+ P + +
Sbjct: 71 GGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEA 130
Query: 265 CIKKISDMKIKKAIIFSDNKSVLNGIDN---IQQRNNIIQLIKQEYYFASTNGSQISFMW 321
+ + + ++ + L + + + Y +
Sbjct: 131 LGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALS 190
Query: 322 IPSHSNIALNDKADQLAKNSINSKLLDFYIQDDLKNHLRKNIVKLYNDQWTNIQNNKLRT 381
S + N +K+ + LL + + L + + +++ +
Sbjct: 191 EDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPY 250
Query: 382 IKD 384
+
Sbjct: 251 ELE 253
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 257
Score = 27.8 bits (61), Expect = 3.1
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 210 PRGPYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQ 245
P P F + + + L R G A +++N +F
Sbjct: 5 PCTPEFYQTHFQLAYRLQSRP--RGLALVLSNVHFT 38
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 26.4 bits (57), Expect = 3.4
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 212 GPYFIKQPTDVVFDLSKRNSN 232
GP F +QP +F
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEK 24
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId:
9606]}
Length = 277
Score = 27.5 bits (60), Expect = 3.6
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 213 PYFIKQPTDVVFDLSKRNSNTGFAFIINNENFQ 245
++ D+ + LS G IINN NF
Sbjct: 3 LESLRGNADLAYILSMEPC--GHCLIINNVNFC 33
>d1rdl1_ d.169.1.1 (1:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 26.2 bits (56), Expect = 4.8
Identities = 10/44 (22%), Positives = 14/44 (31%)
Query: 41 YRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQ 84
Y N AK C L +A +A+E+ I
Sbjct: 2 YFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDV 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.417
Gapped
Lambda K H
0.267 0.0483 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,850,099
Number of extensions: 88973
Number of successful extensions: 264
Number of sequences better than 10.0: 1
Number of HSP's gapped: 252
Number of HSP's successfully gapped: 62
Length of query: 483
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 394
Effective length of database: 1,185,626
Effective search space: 467136644
Effective search space used: 467136644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.6 bits)